BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003544
         (811 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
          Length = 846

 Score = 1271 bits (3288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/847 (77%), Positives = 722/847 (85%), Gaps = 37/847 (4%)

Query: 1   MKLSTSGLCQQ-GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           MKLSTSGL QQ GHEG+ KCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGLGQQQGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNK 60

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP 119
           EVD HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIP 120

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSV
Sbjct: 181 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSV 240

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           LSSDSMHIGLLAAAAHAAATNSCFT+F+NPRASPSEFVIPL+KYVKAVFHTRVSVGMRFR
Sbjct: 241 LSSDSMHIGLLAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFR 300

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           MLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPL
Sbjct: 301 MLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFP 419
           TTFPMYPSLFPLRLKRPWHP  SS +D+RDE A+GL WLRG TG+QGL +LNFQ++GMFP
Sbjct: 361 TTFPMYPSLFPLRLKRPWHPGASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQTVGMFP 420

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQN--- 473
           W QQR++P+FLGNDHNQQYQAMLAAG+Q   SGDP++QQ+MQ QQPFQYLQQ+GS N   
Sbjct: 421 WTQQRLDPTFLGNDHNQQYQAMLAAGLQNLGSGDPLKQQYMQFQQPFQYLQQTGSNNPLL 480

Query: 474 --PLQLKQQQHLLQQLNSQAEDRAQQQQQPQQ----------------HMYHDALQIRTD 515
               Q +  Q  + Q  S A+ +  Q   P+                 H Y ++ QI++D
Sbjct: 481 QQRQQPQVIQQTIPQHMSHAQTQILQDNLPRHLLQQQLNNQQEQPQQQHSYQESFQIQSD 540

Query: 516 ELLQRQQSNLPSPSFSKANFMDSSTEI-SVSISPMQNMLGSL-PEGSGNLLNFS-GAGPS 572
           +L QR Q N+PS SFSKA+F DS+T+  S++ S MQNMLGS+ PEGSGNLLNFS   G S
Sbjct: 541 QLQQRPQPNVPSLSFSKADFPDSNTKFSSITPSSMQNMLGSMCPEGSGNLLNFSRTTGQS 600

Query: 573 MLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHID 632
           ML +Q PQQ   +K+  SQ   F +S SLP  + GKDAAV  ENCN D+QN  +FGV+ID
Sbjct: 601 MLSEQPPQQPWATKFTHSQFNAFANSTSLP-PFTGKDAAVEPENCNLDAQNHTLFGVNID 659

Query: 633 SSGLLLPTTVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTR 691
           SSGLLLPTTV SF ++SVD  VSSMPLG SGF  S++GC+QD SELL N GQ+D  TP+R
Sbjct: 660 SSGLLLPTTVPSFGSSSVDADVSSMPLGASGFQGSLFGCVQDPSELLQNAGQVDPPTPSR 719

Query: 692 TFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
           TFVKVYKSGSVGRSLDI+RFSSY+ELREELGQMFGIEGK E+PLRSGWQLVFVDRENDVL
Sbjct: 720 TFVKVYKSGSVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDRENDVL 779

Query: 752 LLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES-FSPSSGQRANSRGNCGRDPV---- 806
           LLGDDPWEAFV+NVWYIKILSPEDVQKMG+QG+ES FSP+S QR NS G   RD V    
Sbjct: 780 LLGDDPWEAFVNNVWYIKILSPEDVQKMGKQGIESGFSPNSAQRMNSSGTDDRDLVSGLP 839

Query: 807 --GSLEY 811
             GSLEY
Sbjct: 840 SAGSLEY 846


>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
 gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
          Length = 827

 Score = 1260 bits (3261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/828 (77%), Positives = 704/828 (85%), Gaps = 41/828 (4%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL  Q   G+ KCLNSELWHACAGPLVSLPT G+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGLGGQ-QAGEKKCLNSELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKE 59

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQK+TF+P++LG+PS
Sbjct: 60  VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMDLGMPS 119

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHDVEWKFR
Sbjct: 120 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFR 179

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVL 239

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNSCFTVF+NPRASPSEFVIPL+KYVKAVFHTR+SVGMRFRM
Sbjct: 240 SSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRM 299

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 300 LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLRLKRPWHP + S  D+RDE ++GL WLRGG+GE GL +LNFQ+  M PW
Sbjct: 360 TFPMYPSLFPLRLKRPWHPGSPSLLDSRDEASNGLMWLRGGSGEPGLPSLNFQA-NMLPW 418

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNP--- 474
           MQQR++P+ LGNDHNQ+YQAMLAAGMQ   SGDP+RQQFMQLQQPFQYLQQS   NP   
Sbjct: 419 MQQRLDPTMLGNDHNQRYQAMLAAGMQNLGSGDPLRQQFMQLQQPFQYLQQSSGHNPLLQ 478

Query: 475 ------------------LQLKQQ-------QHLL-QQLNSQAEDRAQQQQQPQQHMYHD 508
                             LQ + Q       +HLL QQLN+Q  D+A Q     QH+YHD
Sbjct: 479 LQQQQQQQAIQQSIPHNILQAQNQISTESLPRHLLQQQLNNQPGDQAHQ----HQHIYHD 534

Query: 509 ALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFS 567
            LQI+TD+ LQRQQSNLPSPSFSK  +MDSS++ S + +PMQNMLGSL  EGS NLL+FS
Sbjct: 535 GLQIQTDQ-LQRQQSNLPSPSFSKTEYMDSSSKFSATNTPMQNMLGSLCSEGSVNLLDFS 593

Query: 568 GAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVF 627
            AG S L +Q PQQS   KY   +V  F +S+SLP +Y  KD ++  ENC++D+QN  +F
Sbjct: 594 RAGQSTLTEQLPQQSWVPKYAHQEVNAFANSISLPRTYPEKDPSMEAENCSSDAQNPTLF 653

Query: 628 GVHIDSSGLLLPTTVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQ 686
           G +IDSSGLLLPTTV  + T+S+D  VSSMPLGDSGF NS+YGC+QDSSELL N GQ+D 
Sbjct: 654 GANIDSSGLLLPTTVPRYSTSSIDADVSSMPLGDSGFQNSLYGCVQDSSELLSNAGQMDP 713

Query: 687 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
            TP+ TFVKVYKSGSVGRSLDISRFSSY+ELR EL QMFGIEGK E+P RSGWQLVFVDR
Sbjct: 714 PTPSGTFVKVYKSGSVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDR 773

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 794
           ENDVLLLGDDPWE FV+NVWYIKILSPEDV K+GEQGVE   P++  R
Sbjct: 774 ENDVLLLGDDPWELFVNNVWYIKILSPEDVLKLGEQGVEPSGPNAVHR 821


>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 846

 Score = 1258 bits (3256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/848 (75%), Positives = 707/848 (83%), Gaps = 39/848 (4%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQGHEG+ KCLNSELWHACAGPLVSLPT GTRV YFPQGHSEQVAATTN+E
Sbjct: 1   MKLSTSGLGQQGHEGEKKCLNSELWHACAGPLVSLPTAGTRVAYFPQGHSEQVAATTNRE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELG+PS
Sbjct: 61  VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFR
Sbjct: 121 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLRLKRPWHP TSSF+D RDE  +GL WLRGG G+Q L +LNFQ  G+ PW
Sbjct: 361 TFPMYPSLFPLRLKRPWHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPW 420

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNP--- 474
           MQQR++P+ L NDHNQ YQAM A+G+Q   SGD +RQQ M  QQPF YLQQSG+ NP   
Sbjct: 421 MQQRMDPTLLANDHNQHYQAMFASGLQNLGSGDLMRQQIMNFQQPFNYLQQSGNPNPPLQ 480

Query: 475 ----------------LQLKQQ-------QHLLQQLNSQAEDRAQQQQQPQQHMYHDALQ 511
                           LQ + Q       QHLLQ+ ++  ED+ QQQQQ Q+H Y D + 
Sbjct: 481 LQQPQAIQQSVSSNNILQPQAQVMAENLSQHLLQKSHNNREDQTQQQQQ-QRHTYQDTVL 539

Query: 512 IRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAG 570
           +++D+L QRQ S LPSPS+SK +F+DSS +   S+SP QN+LGSL PEGSGNLLN S +G
Sbjct: 540 LQSDQLHQRQHSGLPSPSYSKPDFLDSSMKFPASVSPGQNILGSLCPEGSGNLLNLSRSG 599

Query: 571 PSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVH 630
            SML +Q PQQS   K+ P QV  F +SM     Y+GKD A+   +CN+D+QN ++FGV+
Sbjct: 600 QSMLTEQLPQQSWAPKFTPLQVNAFGNSMQH-VQYSGKDTAMVPPHCNSDTQNPILFGVN 658

Query: 631 IDSSGLLLPTTVSSFTT-SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTP 689
           IDSSGLLLPTTV  +TT S D   S+MPLG+SGF + +Y C QDSSEL+ + GQ+D    
Sbjct: 659 IDSSGLLLPTTVPRYTTASADSDASAMPLGESGFQSPLYPCGQDSSELVQSAGQVDPQNQ 718

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           TRTFVKVYKSGSVGRSLDISRFSSY+ELREEL QMFGIEGK EDPLRSGWQLVFVDREND
Sbjct: 719 TRTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDREND 778

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN------CGR 803
           VLLLGDDPWE+FV+NVWYIKILSPED+ KMGEQ +ES  PS GQR NS G        G 
Sbjct: 779 VLLLGDDPWESFVNNVWYIKILSPEDIHKMGEQALESLGPSPGQRLNSTGADSHEIVSGL 838

Query: 804 DPVGSLEY 811
             +GSLEY
Sbjct: 839 PSIGSLEY 846


>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 842

 Score = 1245 bits (3221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/843 (75%), Positives = 705/843 (83%), Gaps = 33/843 (3%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQGHEG+ KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTN+E
Sbjct: 1   MKLSTSGLGQQGHEGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNRE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQL+CQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELG+PS
Sbjct: 61  VDGHIPNYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFR
Sbjct: 121 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLRLKRPWHP TSSF+D RDE  +GL WLRGG G+Q L +LNFQ  G+ PW
Sbjct: 361 TFPMYPSLFPLRLKRPWHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPW 420

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQN-PLQ 476
           MQQR++P+ LGNDHNQQYQAM A+G+Q   SGD +RQQ M  QQPF YLQQSG+ N PLQ
Sbjct: 421 MQQRMDPTLLGNDHNQQYQAMFASGLQNLGSGDLMRQQMMNFQQPFNYLQQSGNPNLPLQ 480

Query: 477 LKQQQHLLQQLNS------QAEDRAQQQQQPQQHMYHD--------------ALQIRTDE 516
           L+Q Q + Q ++S      QA+  A+   Q  Q  +++               + +++D+
Sbjct: 481 LQQPQAVQQSVSSNNILQPQAQVLAENLSQHLQKSHNNREDQTQQQQHTYQDTVLLQSDQ 540

Query: 517 LLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLR 575
           L QRQ S LPSPS+SK +F+DSS +   S+SP QNMLGSL PEGSGNLLN S +  SML 
Sbjct: 541 LHQRQHSGLPSPSYSKPDFLDSSMKFPASVSPGQNMLGSLCPEGSGNLLNLSRSSQSMLT 600

Query: 576 QQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSG 635
           +Q PQQS   K+ P Q+  F +SM     Y+GKD A+   +CN DSQN ++FGV+IDSSG
Sbjct: 601 EQLPQQSWAPKFTPLQINAFGNSMQH-VQYSGKDTAMVPPHCNPDSQNPILFGVNIDSSG 659

Query: 636 LLLPTTVSSFTT-SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFV 694
           LLLPTTV  +TT S +   S+MP+G+SGF + +Y C+QDSSEL+ + GQ+D    TRTFV
Sbjct: 660 LLLPTTVPRYTTASAEIDASAMPIGESGFQSPLYPCVQDSSELVQSAGQVDPQNQTRTFV 719

Query: 695 KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 754
           KVYKSGSVGRSLDISRFSSY+ELREEL QMFGIEGK EDPLRSGWQLVFVDRENDVLLLG
Sbjct: 720 KVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLG 779

Query: 755 DDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN------CGRDPVGS 808
           DDPWE+FV+NVWYIKILSPED+ KMGEQ VES  PSSG R NS G        G   +GS
Sbjct: 780 DDPWESFVNNVWYIKILSPEDIHKMGEQAVESLGPSSGHRLNSTGADSHEIVSGLPSIGS 839

Query: 809 LEY 811
           LEY
Sbjct: 840 LEY 842


>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 843

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/844 (74%), Positives = 696/844 (82%), Gaps = 34/844 (4%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQGHEG+ KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTN+E
Sbjct: 1   MKLSTSGLGQQGHEGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNRE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           +D HIPNYP+LPPQLICQLHN+TMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIPS
Sbjct: 61  IDGHIPNYPSLPPQLICQLHNITMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFR
Sbjct: 121 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWS+FVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTR+SVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL-GMFP 419
           TFPMYPSLFPLRLKRPWHP TSS +D RDE  +GL WLRGG  +QGL +LNFQ   GM P
Sbjct: 361 TFPMYPSLFPLRLKRPWHPGTSSLHDGRDEATNGLMWLRGGPVDQGLNSLNFQGAGGMLP 420

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL- 475
           WMQQR++P+ LGND NQQYQAMLAAG+Q   SG  ++QQ M  QQP+ YLQQSG+ N   
Sbjct: 421 WMQQRLDPTLLGNDQNQQYQAMLAAGLQNLGSGYLMKQQLMNFQQPYHYLQQSGNSNSPL 480

Query: 476 ---------------QLKQQQHLL-----QQLNSQAEDRAQQQQQPQQHMYHDALQIRTD 515
                           L+ Q H+L     Q L  +  +  + Q Q QQH Y D+L I  D
Sbjct: 481 QLQQQQPIQQSVSSNMLQPQTHVLTENLSQHLLQKPHNNQEVQAQQQQHTYQDSLSILGD 540

Query: 516 ELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSML 574
           +L QRQ S +PS S+SK +F+DSS +   S+SP QNML SL PEGSG+LLN S +G S+L
Sbjct: 541 QLHQRQHSGIPSSSYSKPDFLDSSMKFPASVSPGQNMLSSLCPEGSGSLLNLSRSGQSLL 600

Query: 575 RQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSS 634
            +Q PQQ    KY P QV  +  ++S P  Y+GKD+ +   +CN+D+QNS +FGV+IDSS
Sbjct: 601 TEQLPQQQWTQKYAPVQVNAYGSTVSHP-QYSGKDSVMVLPHCNSDAQNSTLFGVNIDSS 659

Query: 635 GLLLPTTVSSFTT-SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTF 693
           GLLLPTTV  +TT S D   S+MPL +SGF  S+YGCMQDSSELL + G  D    T+TF
Sbjct: 660 GLLLPTTVPGYTTSSADTNSSTMPLAESGFQGSLYGCMQDSSELLQSAGHTDPENQTQTF 719

Query: 694 VKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 753
           VKVYKSGSVGRSLDISRFSSY+ELREEL QMFGIEGK EDPLRSGWQLVFVDRENDVLLL
Sbjct: 720 VKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLL 779

Query: 754 GDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD------PVG 807
           GDDPWE+FV+NVWYIKILSPED+QKMG+Q VES +  SGQR N  G   +D       +G
Sbjct: 780 GDDPWESFVNNVWYIKILSPEDIQKMGDQAVESLALGSGQRLNGTGAESQDIVSGPPSIG 839

Query: 808 SLEY 811
           SLEY
Sbjct: 840 SLEY 843


>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
 gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
          Length = 826

 Score = 1235 bits (3196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/827 (78%), Positives = 712/827 (86%), Gaps = 36/827 (4%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQGHEG+ KCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGLGQQGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELG+PS
Sbjct: 61  VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGMPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNSCFT+F+NPRASPSEFVIPL+KYVKAVFHTRVSVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLRL+RPWHP  SS +DNRDE  +GL WLRGGTG+QGL +LNFQ++ MFPW
Sbjct: 361 TFPMYPSLFPLRLRRPWHPGPSSLHDNRDEAGNGLMWLRGGTGDQGLHSLNFQAVNMFPW 420

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNP--- 474
            QQR++P+ LGND NQ YQAMLA+G+Q   +GDP+RQQFMQ QQPFQYLQQS S  P   
Sbjct: 421 SQQRLDPALLGNDQNQWYQAMLASGLQNGGNGDPLRQQFMQFQQPFQYLQQSSSHYPLLQ 480

Query: 475 ----------------LQLKQQ-------QHLL-QQLNSQAEDRAQQQQQPQQHMYHDAL 510
                           LQ + Q       +HLL QQL++Q E++AQQQQQ QQH YHDAL
Sbjct: 481 LQQQHQAIQQSTSHSILQAQNQISTESLPRHLLQQQLSNQPENQAQQQQQQQQHNYHDAL 540

Query: 511 QIRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGA 569
           Q++ ++ LQRQQSN+PSPSFSK +FMD   + S S +P+QNMLGSL  EGSGNLL+F+  
Sbjct: 541 QMQGEQ-LQRQQSNVPSPSFSKTDFMDPGNKFSASTTPIQNMLGSLCAEGSGNLLDFTRT 599

Query: 570 GPSM---LRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVV 626
           G S    L +Q PQQS   KY  SQ   F +S+SLP SY+ KD ++  E+CN D+ N+  
Sbjct: 600 GQSTLTSLTEQLPQQSWVPKYAHSQTNAFGNSVSLPRSYSEKDPSIEPEHCNLDAPNATN 659

Query: 627 FGVHIDSSGLLLPTTVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQID 685
           FGV+IDSSGLLLPTTV  F T+SVD  VSSMP+GDSGF +S+YG +QDSSELL + GQ+D
Sbjct: 660 FGVNIDSSGLLLPTTVPRFSTSSVDADVSSMPIGDSGFQSSIYGGVQDSSELLPSAGQVD 719

Query: 686 QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 745
             T +RTFVKVYK GSVGRSLDISRFSSY+ELREEL QMFGIEGK E+P RSGWQLVFVD
Sbjct: 720 PPTLSRTFVKVYKLGSVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVD 779

Query: 746 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
           RENDVLLLGDDPWEAFV+NVWYIKILSPEDVQKMGEQGV+SFS + G
Sbjct: 780 RENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKMGEQGVDSFSQNIG 826


>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
 gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
          Length = 841

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/843 (74%), Positives = 700/843 (83%), Gaps = 34/843 (4%)

Query: 1   MKLSTSGLCQQGHEG-DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           MKLSTSG+ QQGHEG + KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQV+ATTN+
Sbjct: 1   MKLSTSGMSQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNR 60

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP 119
           E+D  IPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIP
Sbjct: 61  EIDGQIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIP 120

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSV
Sbjct: 181 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSV 240

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFR
Sbjct: 241 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFR 300

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           MLFETEESSVRRYMGTIT ISD+DPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPL
Sbjct: 301 MLFETEESSVRRYMGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFP 419
           TTFPMYPSLFPLRLKRPWHP TSSF D RDE  +GL W+RGG G+ GL  +NFQ  G+ P
Sbjct: 361 TTFPMYPSLFPLRLKRPWHPGTSSFLDGRDEATNGLMWMRGGPGDHGLNAMNFQGAGLLP 420

Query: 420 WMQQRVEPSFLGNDHNQQYQAML-AAGMQSG---DPVRQQFMQLQQPFQYLQQSGSQNPL 475
           WMQ R++P+ LGNDHNQQYQAML AAG+Q+    D +RQQ M  QQPF Y QQSG+ +P+
Sbjct: 421 WMQPRLDPTLLGNDHNQQYQAMLAAAGLQNQGNVDLLRQQMMNFQQPFNY-QQSGNLSPM 479

Query: 476 QLK-----------------QQQHLLQQLNSQAEDRAQ--QQQQPQQHMYHDALQIRTDE 516
           QL+                 Q Q L + L+     ++   ++ Q QQH Y D++ I+ D 
Sbjct: 480 QLQQQQAIQQSVSTNNIMQPQGQGLAENLSQHILQKSHNNRENQTQQHSYQDSVLIQGDP 539

Query: 517 LLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLR 575
           L Q+Q S+LPSPS++K +F+DS  + + S+SP QNMLGSL  EGSGNLLN S +G SML 
Sbjct: 540 LHQKQHSSLPSPSYTKPDFIDSGMKFTASVSPGQNMLGSLSSEGSGNLLNLSRSGHSMLT 599

Query: 576 QQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSG 635
           +Q PQQS  SKY PSQV    +SMS    Y+G+D ++   +C++D+QNSV+FGV+IDSSG
Sbjct: 600 EQSPQQSWASKYSPSQVDAIGNSMSH-VQYSGRDTSIVPPHCSSDAQNSVLFGVNIDSSG 658

Query: 636 LLLPTTVSSFTT-SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFV 694
           LLLPTTV  +TT S     S+MPLG+S F  S Y CMQDSSELL + GQ+D    T  FV
Sbjct: 659 LLLPTTVPRYTTASAHADASTMPLGESSFQGSPYPCMQDSSELLQSAGQVDAQNQTPIFV 718

Query: 695 KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 754
           KVYKSGSVGRSLDISRF+SY+ELREEL QMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG
Sbjct: 719 KVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 778

Query: 755 DDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDPV------GS 808
           DDPWE+FV+NVWYIKILSPED+QKMGE+ +ES  PSSGQR N+ G    D V      GS
Sbjct: 779 DDPWESFVNNVWYIKILSPEDIQKMGEEAIESLGPSSGQRMNNTGAESHDIVSGLPSLGS 838

Query: 809 LEY 811
           LEY
Sbjct: 839 LEY 841


>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
 gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score = 1224 bits (3167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/810 (77%), Positives = 687/810 (84%), Gaps = 49/810 (6%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ KCLNSELWHACAGPLVSLPT+G+RVVYFPQGHSEQVAATTNKEVD+HIPNYP+LPPQ
Sbjct: 3   GEKKCLNSELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQ 62

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQK+TF+P++LG+PSKQPTNYFCKTLTAS
Sbjct: 63  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLDLGMPSKQPTNYFCKTLTAS 122

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 123 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 242

Query: 255 HAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           HAAATNSCFTVF+NPR ASPSEFVIPL+KYVKAVFH RVSVGMRFRMLFETEESSVRRYM
Sbjct: 243 HAAATNSCFTVFYNPRWASPSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESSVRRYM 302

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GTITG SDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT+FPMYPSLFPLRL
Sbjct: 303 GTITGTSDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTSFPMYPSLFPLRL 362

Query: 374 KRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGND 433
           KRPWHP +SS     DE ++GL WLRGG+GEQGL +LNFQ+  M PWMQQR++P+ LGND
Sbjct: 363 KRPWHPGSSSL---LDEASNGLIWLRGGSGEQGLPSLNFQA-NMLPWMQQRLDPTMLGND 418

Query: 434 HNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSGSQNP---------------- 474
           HNQQYQAMLAAGMQ+   GDP+RQQFMQLQQPFQY QQS S NP                
Sbjct: 419 HNQQYQAMLAAGMQNLGGGDPLRQQFMQLQQPFQYPQQSSSPNPLLQLQQQHQAMQQSIP 478

Query: 475 ---LQLKQQ-------QHLL-QQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQS 523
              LQ + Q       +HLL QQLN+Q +D+AQQ     QH YHD L I+TD LLQRQQS
Sbjct: 479 HNILQPQNQISSDSLPRHLLQQQLNNQPDDQAQQ----HQHAYHDGLHIQTD-LLQRQQS 533

Query: 524 NLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQS 582
           NLPSPSFSK  +MDSS + +VS +PMQN+LGSL  EGSGNLL+F+ AG S L +Q PQQS
Sbjct: 534 NLPSPSFSKTEYMDSSPKFTVSTTPMQNILGSLCTEGSGNLLDFTRAGQSTLTEQLPQQS 593

Query: 583 LGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTV 642
              KY    V  F +S+SLP +Y  KD +V  ENCN+D+QN   F       GLLLPTTV
Sbjct: 594 WVPKYAHHDVNAFSNSLSLPRTYPEKDLSVEAENCNSDAQNPTFF-------GLLLPTTV 646

Query: 643 SSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS 701
             + T++VD  VSSMPLGDSGF NS+YGC+QDSSELL N GQ+D  TP+RTFVKVYKSGS
Sbjct: 647 PRYPTSTVDTDVSSMPLGDSGFQNSLYGCVQDSSELLPNAGQMDPPTPSRTFVKVYKSGS 706

Query: 702 VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 761
           VGRSLDISRFSSY+ELREEL QMFGIEGK E+P RSGWQLVFVDRENDVLLLGDDPWE F
Sbjct: 707 VGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWELF 766

Query: 762 VSNVWYIKILSPEDVQKMGEQGVESFSPSS 791
           V+NVWYIKILSPEDV KMGEQG ES  P++
Sbjct: 767 VNNVWYIKILSPEDVLKMGEQGFESSGPNA 796


>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
          Length = 854

 Score = 1209 bits (3127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/859 (72%), Positives = 691/859 (80%), Gaps = 53/859 (6%)

Query: 1   MKLSTSGLCQQGHEG-DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           MKLSTSG  QQ HEG + KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP 119
           EVD HIPNYPNLPPQLICQLHNVTMHA VETDEVYAQMTLQPL+ +EQKDTF+P+ELGIP
Sbjct: 61  EVDGHIPNYPNLPPQLICQLHNVTMHAVVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S+QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIA+DLHD+EWKF
Sbjct: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKF 180

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSV
Sbjct: 181 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSV 240

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           LSSDSMHIGLLAAAAHAAATNSCFTVF+NPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR
Sbjct: 241 LSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 300

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           MLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPL
Sbjct: 301 MLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFP 419
           TTFPMYPSLFPLRLKRPWHP  SS +DNR++ ++GL WLRGG GEQGL +LN QS+   P
Sbjct: 361 TTFPMYPSLFPLRLKRPWHPGVSSVHDNREDASNGLMWLRGGVGEQGLHSLNLQSVSSLP 420

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSG------ 470
           W+QQR++ S  GNDHNQQYQAMLAAGM +    D +RQQ M LQQPFQY+ Q+G      
Sbjct: 421 WLQQRLDSSMFGNDHNQQYQAMLAAGMPNLGGVDMLRQQIMHLQQPFQYIPQAGFHNSLL 480

Query: 471 ----------------------SQNPLQLKQQ-------QHLLQQ-LNSQAEDRAQQQQQ 500
                                  QN LQ   Q       QH+LQQ L +Q ED   Q   
Sbjct: 481 QMQQQQQQQQQQQQQQLVQHSMPQNILQAPSQVMAENLPQHILQQTLQNQPEDLPNQ--- 537

Query: 501 PQQHMYHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLG-SLPEG 559
            QQH YHD +Q+++++  Q   SN+PSP+F + + MDS+T  S SI+  +N+L  S  EG
Sbjct: 538 -QQHTYHDTIQVQSNQFHQGGHSNVPSPTFPRTDLMDSNTSYSESITSRRNILASSCAEG 596

Query: 560 SGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNT 619
           +GNL     +G S+L +  PQQS  SK   SQV    +SMS P  ++G+D+ +   NCN+
Sbjct: 597 TGNLSTIYRSGQSILTEHLPQQSPVSKNAHSQVDAHPNSMSFP-PFSGRDSILELGNCNS 655

Query: 620 DSQNSVVFGVHIDSSGLLLPTTVSSFTT-SVDPGVSSMPLGDSGFHNSMYGCMQDSSELL 678
           DS +  +FGV+IDSSGLLLP+ V ++T+ S+ P  SSMPLGDSGF NS+Y C+QDSSELL
Sbjct: 656 DSPSPTLFGVNIDSSGLLLPSNVPTYTSPSIGPDSSSMPLGDSGFQNSLYSCVQDSSELL 715

Query: 679 HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF-EDPLRS 737
           HN GQ+D   PTRTFVKVYK+GSVGRSLDISRFSSY ELREEL QMFGIEG+  EDP RS
Sbjct: 716 HNSGQVDPSNPTRTFVKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRS 775

Query: 738 GWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 797
           GWQLVFVDRENDVLLLGDDPWEAFV+NV +IKILSPED QK+GEQ +ESF+P  GQR  S
Sbjct: 776 GWQLVFVDRENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKLGEQAIESFNPIVGQRLTS 835

Query: 798 RGN-----CGRDPVGSLEY 811
            GN      G   VGSLEY
Sbjct: 836 GGNEAGNVSGLPSVGSLEY 854


>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 841

 Score = 1203 bits (3113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/844 (73%), Positives = 695/844 (82%), Gaps = 36/844 (4%)

Query: 1   MKLSTSGLCQQGHEG-DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           MKLSTSGL QQGHEG + KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTN+
Sbjct: 1   MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNR 60

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP 119
           E+D HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+ +ELGIP
Sbjct: 61  EIDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLSMELGIP 120

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           SKQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFSLQPPAQELIARDLHD EWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDAEWKF 180

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHIFRGQPKRHLLTTGWS+FVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSV
Sbjct: 181 RHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSV 240

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           LSSDSMHIGLLAAAAHAAATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTR+SVGMRFR
Sbjct: 241 LSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFR 300

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           MLFETEESSVRRYMGTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPL
Sbjct: 301 MLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFP 419
           TTFPMYPSLFPLRLKRPWHP TSS +D RDE  +GL W+RGG  +QGL +LNFQ  GM P
Sbjct: 361 TTFPMYPSLFPLRLKRPWHPGTSSLHDGRDEATNGLMWMRGGPVDQGLNSLNFQGAGMLP 420

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL- 475
           WMQQR++P+ LGND NQQYQAMLAAG+Q   SG  ++QQ M  QQP+ YLQQSG+ N   
Sbjct: 421 WMQQRLDPTLLGNDQNQQYQAMLAAGLQNLGSGYLMKQQMMNFQQPYHYLQQSGNSNSPL 480

Query: 476 ---------------QLKQQQHLL-----QQLNSQAEDRAQQQQQPQQHMYHDALQIRTD 515
                           L+ Q H+L     Q L  +  +  + Q Q QQH Y D+L I +D
Sbjct: 481 QLQQQQPIQQSVSSNMLQPQAHVLTENLSQHLLQKPHNNQEVQAQQQQHTYQDSLLIPSD 540

Query: 516 ELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSML 574
           +L QRQ S +PSPS+SK +F+DSS +   S+SP QNML SL PEGSG+LLN S +  S+L
Sbjct: 541 QLHQRQHSGIPSPSYSKPDFLDSSMKFPASVSPGQNMLSSLCPEGSGSLLNLSRSSLSLL 600

Query: 575 RQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSS 634
            +Q PQQ    KY P QV  +  ++S  + Y+GKD+A+   +CN+D+QNS +FGV+IDSS
Sbjct: 601 TEQLPQQQWTQKYAPVQVNTYGGTVS-HAQYSGKDSAMVLPHCNSDAQNSTLFGVNIDSS 659

Query: 635 GLLLPTTVSSFTT-SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTF 693
           G LLP TV  +TT S D   S+MPL DSGF  S+YGCM DSSELL + G +D    ++TF
Sbjct: 660 G-LLPITVPGYTTSSADTNSSTMPLADSGFQGSLYGCM-DSSELLQSAGHVDPENQSQTF 717

Query: 694 VKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 753
           VKVYKSGSVGRSLDISRFSSY+ELREEL QMFGIEGK EDPLRSGWQLVFVDRENDVLLL
Sbjct: 718 VKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLL 777

Query: 754 GDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD------PVG 807
           GDDPWE+FV+NVWYIKILSPED+QKMGEQ VES +  SGQR N  G   +D       +G
Sbjct: 778 GDDPWESFVNNVWYIKILSPEDIQKMGEQAVESLALGSGQRLNGTGAESQDIVSGPPSIG 837

Query: 808 SLEY 811
           SLEY
Sbjct: 838 SLEY 841


>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
          Length = 820

 Score = 1199 bits (3101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/824 (75%), Positives = 697/824 (84%), Gaps = 40/824 (4%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQ HEG+NKCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGLSQQAHEGENKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDT++P+ELGIPS
Sbjct: 61  VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTYIPVELGIPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPP QELIARDLHDVEWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHDVEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAA+TNSCFT+F+NPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAASTNSCFTIFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGI DLDP+RW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGIGDLDPIRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLRLKRPW+P  SSF D R+   +G+ WLRG TGEQGL +LNFQ++GMFPW
Sbjct: 361 TFPMYPSLFPLRLKRPWYPGASSFQDGREGAVNGMTWLRGETGEQGLHSLNFQNVGMFPW 420

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSGSQNPLQL 477
            QQRV+ +F  ND NQQYQAMLAAG+Q+   GD ++QQF+QLQQPFQY Q SGSQNPL L
Sbjct: 421 TQQRVDTTFARNDLNQQYQAMLAAGLQNIGGGDSLKQQFLQLQQPFQYFQHSGSQNPL-L 479

Query: 478 KQQQ------------------------HLLQQLNSQAEDRAQQQQQPQQHMYHDALQIR 513
           +Q Q                        H+ QQ+N+Q+E+      QPQQH Y D   I+
Sbjct: 480 QQHQVIQPSISSHILQAQTQMLPENLPRHMQQQVNNQSEE------QPQQHTYQDPFLIQ 533

Query: 514 TDELLQRQQSNLPSPSFSKANFMDSSTEISVSISP-MQNMLGSL-PEGSGNLLNFSGAGP 571
           +D+L QRQQSN+PS SFSK +F DS+ + S S++P +QNMLGSL  +GS NL NFS  G 
Sbjct: 534 SDQLQQRQQSNVPSHSFSKIDFADSNAKFSTSVTPCIQNMLGSLSTDGSANLFNFSSTGQ 593

Query: 572 SMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHI 631
           SM+ +   QQ   SK+  SQV    +S+SL + Y GKD AV  ENC+ D QN  +FG +I
Sbjct: 594 SMVSEP-SQQPWVSKFTHSQVNPSANSVSL-TPYPGKDTAVEQENCSLDGQNHALFGANI 651

Query: 632 DSSGLLLPTTVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPT 690
           D  GLLLPTT+SS  T+SV+  VSSMPLG SGF +S+YGCMQDSSELLH+  Q+D  T  
Sbjct: 652 D-PGLLLPTTLSSIGTSSVNADVSSMPLGASGFQSSLYGCMQDSSELLHSAAQVDPPTAN 710

Query: 691 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
           RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEG  +DP RSGWQLVFVDRE+DV
Sbjct: 711 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGLLKDPQRSGWQLVFVDREDDV 770

Query: 751 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 794
           LLLGD PWEAFV+NVWYIKILSPEDV K+G+Q VESFS ++G+R
Sbjct: 771 LLLGDGPWEAFVNNVWYIKILSPEDVLKLGKQEVESFSHNTGER 814


>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
          Length = 836

 Score = 1198 bits (3100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/841 (73%), Positives = 688/841 (81%), Gaps = 35/841 (4%)

Query: 1   MKLSTSGLCQQGHEG-DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           MKLSTSG  QQ HEG + KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP 119
           EVD HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKDTF+P+ELGIP
Sbjct: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S+QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIA+DLHD+EWKF
Sbjct: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKF 180

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSV
Sbjct: 181 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSV 240

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           LSSDSMHIGLLAAAAHAAATNSCFTVF+NPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR
Sbjct: 241 LSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 300

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           MLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPL
Sbjct: 301 MLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFP 419
           TTFPMYPSLFPLRLKRPWHP  SS +DNR++ ++GL WLRGG GEQGL +LN QS+   P
Sbjct: 361 TTFPMYPSLFPLRLKRPWHPGVSSVHDNREDASNGLMWLRGGVGEQGLHSLNLQSVSSLP 420

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQL----------QQPFQYL 466
           W+QQR++ S  GNDHNQQYQAMLAAGM +    D +RQQ M L          QQ  Q +
Sbjct: 421 WLQQRLDSSMFGNDHNQQYQAMLAAGMPNLGGVDMLRQQIMHLQQPFQYIPQQQQQQQLV 480

Query: 467 QQSGSQNPLQLKQQ-------QHLLQQ-LNSQAEDRAQQQQQPQQHMYHDALQIRTDELL 518
           Q S  QN LQ   Q       QH+LQQ L +Q ED   Q    QQH YHD +Q+++++  
Sbjct: 481 QHSMPQNILQAPSQVMAENLPQHILQQTLQNQPEDLPNQ----QQHTYHDTIQVQSNQFH 536

Query: 519 QRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLG-SLPEGSGNLLNFSGAGPSMLRQQ 577
           Q   SN+PSP+F + + MDS+T  S SI+  +N+L  S  EG+GNL     +G S+L + 
Sbjct: 537 QGGHSNVPSPTFPRTDLMDSNTSYSESITSRRNILASSCAEGTGNLSTIYRSGQSILTEH 596

Query: 578 FPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLL 637
            PQQS  SK   SQV    +SMS P  ++G+D+ +   NCN+DS +  +FGV+IDSSGLL
Sbjct: 597 LPQQSPVSKNAHSQVDAHPNSMSFP-PFSGRDSILELRNCNSDSPSPTLFGVNIDSSGLL 655

Query: 638 LPTTVSSFTT-SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKV 696
           LP+ V ++T+ S+ P  SSMPLGDSGF NS+Y C+QDSSELLHN GQ+D   PTRTFVKV
Sbjct: 656 LPSNVPTYTSPSIGPDSSSMPLGDSGFQNSLYSCVQDSSELLHNSGQVDPSNPTRTFVKV 715

Query: 697 YKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF-EDPLRSGWQLVFVDRENDVLLLGD 755
           YK+GSVGRSLDISRFSSY ELREEL QMFGIEG+  EDP RSGWQLVFVDRENDVLLLGD
Sbjct: 716 YKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVDRENDVLLLGD 775

Query: 756 DPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN-----CGRDPVGSLE 810
           DPWEAFV+NV +IKILSPED QK+GEQ +ESF+P  GQR  S GN      G   VGSLE
Sbjct: 776 DPWEAFVNNVGFIKILSPEDFQKLGEQAIESFNPIVGQRLTSGGNEAGNVSGLPSVGSLE 835

Query: 811 Y 811
           Y
Sbjct: 836 Y 836


>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
          Length = 843

 Score = 1184 bits (3063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/851 (71%), Positives = 687/851 (80%), Gaps = 48/851 (5%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSG+ QQ HEG+ KCLNSEL HACAGPLV LPTVG+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGMGQQPHEGEKKCLNSELRHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKDT++P+ELGIPS
Sbjct: 61  VDAHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTRQEQKDTYLPVELGIPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS  PP QELIARDLHD+EWKFR
Sbjct: 121 RQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNKKNQLLLGIRRATRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGI DLDPVRW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLRLKRPW+P TSSF +N  ET +G+ WLRG  G+QG   +N QS GM PW
Sbjct: 361 TFPMYPSLFPLRLKRPWYPGTSSFQENNSETINGMAWLRGEGGDQGPHLMNLQSFGMLPW 420

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL-- 475
           MQQRV+P+ L ND NQQYQAMLA G+Q   SGD ++QQ MQ QQP QYLQ +GS NPL  
Sbjct: 421 MQQRVDPTILRNDLNQQYQAMLATGLQNFGSGDMLKQQLMQFQQPVQYLQHAGSHNPLLQ 480

Query: 476 -----------------------QLKQ-QQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQ 511
                                  Q+   Q+   QQ+ +Q +D+A       QH Y +A Q
Sbjct: 481 QQQQQQAMQQQQAIHQHMLPAQTQMDNVQRQPQQQVGNQMDDQA------HQHSYQEAYQ 534

Query: 512 IRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISP--MQNMLGSL-PEGSGNLLNFSG 568
           I   +L Q+Q SN+PS SFSK +F D +++ + SI+P  +   LGSL  EGS N LNF+ 
Sbjct: 535 ISHSQLQQKQPSNIPSQSFSKPDFADPNSKFAASIAPSVIPMGLGSLCSEGSSNFLNFNR 594

Query: 569 AG-PSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVF 627
            G  S++ +Q PQ+S  SK+  S++    +S SLP+   GKD     E C+ ++QN  +F
Sbjct: 595 IGQQSVIMEQPPQKSWMSKFGHSELNAGSNSSSLPAY--GKDTPTSQETCSLNAQNQTLF 652

Query: 628 GVHIDSSGLLLPTTVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQ 686
           G ++DSSGLLLPTTVS+  TT +D  +S+MPLG SGF NS+YG +QDSS+LLHN GQ+D 
Sbjct: 653 GANVDSSGLLLPTTVSNVSTTPIDADMSTMPLGTSGFQNSLYGYVQDSSDLLHNAGQVDS 712

Query: 687 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           L  TRTFVKVYKSGSVGRSLDI+RF+SY+ELR+ELGQMFGIEG  EDP RSGWQLVFVDR
Sbjct: 713 LNATRTFVKVYKSGSVGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRSGWQLVFVDR 772

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD-- 804
           ENDVLLLGDDPWEAFV+NVWYIKILSPEDV K+G++ VES +  S +R NS    GRD  
Sbjct: 773 ENDVLLLGDDPWEAFVNNVWYIKILSPEDVLKLGKEEVESLNRGSLERMNSNSADGRDFM 832

Query: 805 ----PVGSLEY 811
                +GSL+Y
Sbjct: 833 SGLPSIGSLDY 843


>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
 gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
          Length = 849

 Score = 1167 bits (3018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/851 (72%), Positives = 683/851 (80%), Gaps = 42/851 (4%)

Query: 1   MKLSTSGLCQQGHEGD---NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATT 57
           MKLSTSGL QQGHEG     KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQV+ATT
Sbjct: 1   MKLSTSGLGQQGHEGGGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATT 60

Query: 58  NKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG 117
           N+E+D  IPNYP+LPPQL+CQLHNVTMHADVETDEVYAQMTLQPL+PEEQKDTF+P+ELG
Sbjct: 61  NREIDGQIPNYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELG 120

Query: 118 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
           IPSKQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEW
Sbjct: 121 IPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEW 180

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS 237
           KFRHIFRGQPKRHLLTTGWS+FVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPS
Sbjct: 181 KFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPS 240

Query: 238 SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
           SVLSSDSMHIGLLAAAAHA+ATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTR+SVGMR
Sbjct: 241 SVLSSDSMHIGLLAAAAHASATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMR 300

Query: 298 FRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           FRMLFETEESSVRRYMGTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIE
Sbjct: 301 FRMLFETEESSVRRYMGTITGISDLDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIE 360

Query: 358 PLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGM 417
           PLTTFPMYPSLFPLRLKRPWHP TSS  D RDE  + L W+RGG  +QGL +LNFQ  GM
Sbjct: 361 PLTTFPMYPSLFPLRLKRPWHPGTSSLLDGRDEATNALMWMRGGPADQGLNSLNFQGAGM 420

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAML-AAGMQS---GDPVRQQFMQL-QQPFQYLQQSGSQ 472
            PWMQQR++P+ LGND NQQYQAML AAGMQ+   G  +R Q +   QQP  YLQ   + 
Sbjct: 421 LPWMQQRLDPTLLGNDQNQQYQAMLAAAGMQNMGGGYLMRPQMVNFQQQPTHYLQSGNNN 480

Query: 473 NPLQLKQQQHLLQQLNSQAEDRAQQQ-----------QQP----------QQHMYHDALQ 511
           +PLQL Q Q + Q ++S      Q Q           Q+P          QQH Y D L 
Sbjct: 481 SPLQLHQPQSIQQSVSSNMMQPQQTQILTENLSQHLLQKPNNNQELQAQQQQHAYQDTLL 540

Query: 512 IRTDELLQR-QQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSG- 568
           ++ D+L QR QQSN+PSPS+SK +F+DS+ +   S+   QNMLGSL PEG+GNLLN S  
Sbjct: 541 VQNDQLHQRQQQSNVPSPSYSKPDFLDSNIKFPASVPSGQNMLGSLCPEGTGNLLNLSSL 600

Query: 569 --AGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVV 626
             +G S++ +Q PQQS   KY   QV  F  +MS  + Y+GKD+A+   +C++D+QN  +
Sbjct: 601 TRSGQSLMNEQLPQQSWTPKYGNMQVNAFGSAMSH-AQYSGKDSAIVPPHCDSDAQNHTL 659

Query: 627 FGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQ 686
            GV+IDSSGLLLPTTV ++T S     +S  LG+SGF  S+Y CMQDSS  L N  QID 
Sbjct: 660 SGVNIDSSGLLLPTTVPNYTASTTDTGASTQLGESGFQGSLYACMQDSS-FLQNAEQIDT 718

Query: 687 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
                TFVKVYKSGSVGRSLDISRFS Y ELREELGQMFGIEGK EDPLRSGWQLVFVDR
Sbjct: 719 QNQNPTFVKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSGWQLVFVDR 778

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN-----C 801
           ENDVLLLGDDPWE+FV+NVWYIKILSPED+QKMG+Q VE     SGQR N  G       
Sbjct: 779 ENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGDQAVEMHGLGSGQRLNGTGESHHIVS 838

Query: 802 GRDP-VGSLEY 811
           G+ P +GSL+Y
Sbjct: 839 GQPPSIGSLDY 849


>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
 gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
          Length = 844

 Score = 1165 bits (3015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/846 (71%), Positives = 681/846 (80%), Gaps = 37/846 (4%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSG+ QQ HEG+NKCLNSELWHACAGPLV LPTVG+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGMGQQAHEGENKCLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKDT++P+ELGIPS
Sbjct: 61  VDIHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS  PP QELIARDLHD+EWKFR
Sbjct: 121 RQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQL LGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAA+TNSCF VFFNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGI DLDPVRW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL-GMFP 419
           TFPMYPSLFPLRLKRPW+P TSSF +N  E  +G+ WLRG + EQG   LN QS  GMFP
Sbjct: 361 TFPMYPSLFPLRLKRPWYPGTSSFQENNSEAINGMTWLRGESSEQGPHLLNLQSFGGMFP 420

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPLQ 476
           WMQQRV+P+ L ND NQQYQAMLA+G+Q   SGD ++QQ MQ  QP QY+Q +GS NPL 
Sbjct: 421 WMQQRVDPTMLRNDLNQQYQAMLASGLQNFGSGDLMKQQLMQFPQPVQYVQHAGSVNPLL 480

Query: 477 LKQQQHLL--------QQLNSQAEDRA----------QQQQQPQQHMYHDALQIRTDELL 518
            +QQQ             L +Q +D            Q ++Q  QH Y DA QI   +L 
Sbjct: 481 QQQQQQQETMQQTIHHHMLPAQTQDNLQRQQQQHVSNQTEEQSHQHSYQDAYQIPNSQLQ 540

Query: 519 QRQQSNLPSPSFSKANFMDSSTEISVSISP--MQNMLGSL-PEGSGNLLNFS--GAGPSM 573
           Q+Q SN+PSPSFSK +  D S++ S SI+P  M   LGSL  EG+ N LNF+  G  P +
Sbjct: 541 QKQPSNVPSPSFSKPDIADPSSKFSASIAPSGMPTALGSLCSEGTTNFLNFNIIGQQPVI 600

Query: 574 LRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDS 633
           + QQ  Q+S  +K+  SQ+     S SL S Y GK+ +   E C+ D+QN  +FG ++DS
Sbjct: 601 MEQQQQQKSWMAKFANSQLNMGSSSPSL-SGY-GKETSNSQETCSLDAQNQSLFGANVDS 658

Query: 634 SGLLLPTTVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRT 692
           SGLLLPTTVS+  TTS+D  +SSMPLG SGF N +Y  +QDS++LLHNVGQ D  T  RT
Sbjct: 659 SGLLLPTTVSNVATTSIDADISSMPLGTSGFPNPLYSYVQDSTDLLHNVGQADAQTVPRT 718

Query: 693 FVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
           FVKVYKS S+GRSLDI+RF+SY+ELR+ELGQMFGIEG  E+P RSGWQLVFVDRENDVLL
Sbjct: 719 FVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGFLENPQRSGWQLVFVDRENDVLL 778

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC-GRD------P 805
           LGDDPWE FV+NVWYIKILSPEDVQK+G++ V S +    +R +S  +  GRD       
Sbjct: 779 LGDDPWEEFVNNVWYIKILSPEDVQKLGKEEVGSLNRGPPERMSSNNSADGRDFMSGLPS 838

Query: 806 VGSLEY 811
           +GSL+Y
Sbjct: 839 IGSLDY 844


>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
 gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
          Length = 844

 Score = 1165 bits (3013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/847 (70%), Positives = 679/847 (80%), Gaps = 39/847 (4%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSG+ QQ HEG+NKCLNSELWHACAGPLV LPTVG+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGMGQQAHEGENKCLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           +D HIPNYPNLPPQLIC LHNVTMHADVETDEVYAQMTLQPL+ +EQKDT++P+ELGIPS
Sbjct: 61  LDIHIPNYPNLPPQLICPLHNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS  PP QELIARDLHD+EWKFR
Sbjct: 121 RQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQL LGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAA+TNSCF VFFNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGI DLDPVRW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLRLKRP++  TSS+ D+ +E  + ++WLRG  GE G  ++N QS GM PW
Sbjct: 361 TFPMYPSLFPLRLKRPFYQGTSSYQDSNNEAINRMSWLRGNAGELGHHSMNLQSFGMLPW 420

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL-- 475
           MQQRV+ + L ND NQ YQAMLA G+Q   SGD ++QQ MQ QQP QYLQ + ++N +  
Sbjct: 421 MQQRVDSTILPNDINQHYQAMLATGLQSFGSGDLLKQQLMQFQQPVQYLQHASTENSILH 480

Query: 476 ----------QLKQQQHLLQ----------QLNSQAEDRAQQQQQPQQHMYHDALQIRTD 515
                     Q    QH+L           Q  SQ +   Q ++Q  QH Y +A Q+  D
Sbjct: 481 QQQQQQQQIMQQAVHQHMLPAQTQMLSENLQRQSQHQSNNQSEEQAHQHTYQEAFQLPHD 540

Query: 516 ELLQRQQSNLPSPSFSKANFMDSSTEISVSISP--MQNMLGSL-PEGSGNLLNFSGAGPS 572
           +L QRQ SN+ SP F KA+F D +++ S S++P  +QNMLGSL  EGS N LN +  G S
Sbjct: 541 QLQQRQPSNVTSP-FLKADFADLTSKFSASVAPSGVQNMLGSLCSEGSNNSLNINRTGQS 599

Query: 573 MLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHID 632
           ++ +Q PQQS  SK+  SQ+    +S SLP+   GKD      NC+ DSQN  +FG ++D
Sbjct: 600 VIIEQSPQQSWMSKFTESQLNTCSNSSSLPTY--GKDTFNPRGNCSLDSQNQSLFGANVD 657

Query: 633 SSGLLLPTTVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTR 691
           SSGLLLPTTVS+  TTS+D  +SSMPLG SGF N +Y  +QDS++LLHNVGQ D  T  R
Sbjct: 658 SSGLLLPTTVSNVATTSIDADISSMPLGTSGFPNPLYSYVQDSTDLLHNVGQADAQTVPR 717

Query: 692 TFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
           TFVKVYKS S+GRSLDI+RF+SY+ELR+ELGQMFGIEG  EDP RSGWQLVFVDRENDVL
Sbjct: 718 TFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGLLEDPQRSGWQLVFVDRENDVL 777

Query: 752 LLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC-GRD------ 804
           LLGDDPWE FV+NVWYIKILSPEDVQK+G++ V S +    +R +S  +  GRD      
Sbjct: 778 LLGDDPWEEFVNNVWYIKILSPEDVQKLGKEEVGSLNRGPPERMSSNNSADGRDFMSGLP 837

Query: 805 PVGSLEY 811
            +GSL+Y
Sbjct: 838 SIGSLDY 844


>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
          Length = 838

 Score = 1125 bits (2909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/845 (69%), Positives = 659/845 (77%), Gaps = 41/845 (4%)

Query: 1   MKLSTSGLCQQGHEG--DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN 58
           M++S +G+  Q  EG  + KCLNSELWHACAGPLVSLP +G+RVVYFPQGHSEQV A+TN
Sbjct: 1   MRVSLAGVNPQAEEGTGEKKCLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVTASTN 60

Query: 59  KEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELG 117
           KE+D+HIP+YP LP QLICQLHNVTMHAD ETDEVYAQMTLQPLS +EQKD   +P ELG
Sbjct: 61  KEIDAHIPSYPGLPAQLICQLHNVTMHADNETDEVYAQMTLQPLSAQEQKDVCLLPAELG 120

Query: 118 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
           +PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD+S QPPAQELIA+DLH  EW
Sbjct: 121 MPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEW 180

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS 237
           KFRH+FRGQPKRHLLTTGWSVFVSAKRLVAGD+V+FIWNE NQLLLGIRRA RP TVMPS
Sbjct: 181 KFRHVFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPS 240

Query: 238 SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
           SVLSSDSMHIGLLAAAAHAAATNS FT+F+NPRASPS+FVIPL KY KAV+HTRVSVGMR
Sbjct: 241 SVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSDFVIPLAKYAKAVYHTRVSVGMR 300

Query: 298 FRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           FRMLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIE
Sbjct: 301 FRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 360

Query: 358 PLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQ-GLTTLNFQSLG 416
           PLTTFPMY SLFPLRLKRPW+P  SSF D+ +E  +G+ WLRG  GEQ G  ++N QS G
Sbjct: 361 PLTTFPMYSSLFPLRLKRPWYPGPSSFQDSNNEVINGMTWLRGEIGEQGGPQSVNLQSFG 420

Query: 417 MFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQN 473
           M PWMQQRV+P+ L  D+NQQYQAMLAAG+Q   + D  +QQ MQ QQP QYLQ SGS N
Sbjct: 421 MLPWMQQRVDPAMLRTDYNQQYQAMLAAGLQNFGNADLFKQQLMQFQQPAQYLQASGSHN 480

Query: 474 PL---------------QLKQQQHLLQ---QLNSQAEDRAQQQQQPQQHMYHDALQIRTD 515
           PL                L  Q  +L    Q + Q +   Q ++  QQH Y +A  +  D
Sbjct: 481 PLLQQQQQVIQQPMSSHMLPAQTQMLSDSLQRHPQQQTSGQTEEPTQQHAYQEAFPVSHD 540

Query: 516 ELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSML 574
           +L QR  SN+PSPSFSK NF        VS S MQ+MLGSL PEGS NLLNF   G S L
Sbjct: 541 QLQQRPLSNIPSPSFSKTNFAP-----PVSPSSMQSMLGSLCPEGSSNLLNFKRTGQSAL 595

Query: 575 RQQFP--QQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHID 632
            +  P  QQS   K+  S +    +S+S P SY GK+A+   E C  D+QN   FG  ID
Sbjct: 596 NEHQPQVQQSWSPKFANSHISTCSNSVSTP-SYPGKEASSQQETCALDAQNQSFFGASID 654

Query: 633 SSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRT 692
           S GLLLPTT+SS TTSV   VSS+P G SGF NS YG +QDSSEL+ + GQ+D  TP RT
Sbjct: 655 SPGLLLPTTLSSVTTSVVADVSSLPSGASGFQNSPYGYVQDSSELVSSAGQVDPSTP-RT 713

Query: 693 FVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
           F+KVYKSG VGRSLDI+R SSY+ELR+EL QMFGIEG  EDP RSGWQLVFVDRENDVLL
Sbjct: 714 FIKVYKSGYVGRSLDITRISSYHELRQELAQMFGIEGLLEDPQRSGWQLVFVDRENDVLL 773

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD------PV 806
           LGDDPWEAFV+NVWYIKILSPEDVQK+G+Q  +S S ++ +R N  G  GRD       +
Sbjct: 774 LGDDPWEAFVNNVWYIKILSPEDVQKLGKQEAKSLSRNTMERMNGSGADGRDHLSGFPSL 833

Query: 807 GSLEY 811
           GSLEY
Sbjct: 834 GSLEY 838


>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 805

 Score = 1088 bits (2814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/811 (71%), Positives = 647/811 (79%), Gaps = 48/811 (5%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQGHEG+ KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGLGQQGHEGE-KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPS
Sbjct: 60  VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPS 119

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD++LQPPAQELIARDLHDVEWKFR
Sbjct: 120 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR A RP T++PSSVL
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHA+ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRM
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQSLGMFP 419
           TFPMYPSLFPLRLKRPWH  TSS  D R +  SGL WLRGG GEQ     LN+ S+G+FP
Sbjct: 360 TFPMYPSLFPLRLKRPWHAGTSSLADGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFP 419

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPF-QYLQQSGSQNP- 474
           WMQQR++ + +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S NP 
Sbjct: 420 WMQQRLDLTQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPHQQYLQQSASHNPD 479

Query: 475 LQLKQQQHLLQQLNSQAEDRAQQQQQPQQHM---------------------YHDALQIR 513
           L L+QQQH   +    A+ +   +  PQQ+M                     Y +A +++
Sbjct: 480 LMLQQQQHQQARHLMHAQSQIMSENLPQQNMRQEVSNQPAGQQQLQQADQNAYLNAFKMQ 539

Query: 514 TDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSM 573
              L Q Q S +PSPSF K++F DSS + + + SP         +GS NLLNFS  G S+
Sbjct: 540 NGHLQQWQHSEMPSPSFMKSDFPDSSNKFATTASPASG------DGS-NLLNFSITGQSV 592

Query: 574 LRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDS 633
           L    P+Q     + P     F   +SLP +Y GK  A+       +  N  +FGV  D 
Sbjct: 593 L----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLAL-------EPGNPSLFGVDPD- 640

Query: 634 SGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRT 692
           SGL LP+TV  F +S  D   S M L DSGF NS++GCMQD+ ELLH  GQI+  T T+ 
Sbjct: 641 SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLFGCMQDTHELLHGAGQINPSTQTKN 700

Query: 693 FVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
           FVKVYKSGSVGRSLDISRFSSY+ELREELG+MF IEG  EDPLRSGWQLVFVD+END+LL
Sbjct: 701 FVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILL 760

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           LGDDPWE+FV+NVWYIKILSPEDVQ+MG+ G
Sbjct: 761 LGDDPWESFVNNVWYIKILSPEDVQQMGDHG 791


>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
           WITHOUT FERTILIZATION
 gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
 gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 811

 Score = 1083 bits (2800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/820 (70%), Positives = 646/820 (78%), Gaps = 60/820 (7%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQGHEG+ KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGLGQQGHEGE-KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPS
Sbjct: 60  VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPS 119

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD++LQPPAQELIARDLHDVEWKFR
Sbjct: 120 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR A RP T++PSSVL
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHA+ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRM
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQSLGMFP 419
           TFPMYPSLFPLRLKRPWH  TSS  D R +  SGL WLRGG GEQ     LN+ S+G+FP
Sbjct: 360 TFPMYPSLFPLRLKRPWHAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFP 419

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQSGSQNP- 474
           WMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S N  
Sbjct: 420 WMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQSASHNSD 479

Query: 475 LQLKQ------QQHLLQQLNSQAEDRAQQQQQPQQHM----------------------Y 506
           L L+Q       +HL+      A+ +   +  PQQ+M                      Y
Sbjct: 480 LMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQPDQNAY 534

Query: 507 HDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLN 565
            +A +++   L Q +QQS +PSPSF K++F DSS + + + SP          G GNLLN
Sbjct: 535 LNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--------SGDGNLLN 586

Query: 566 FSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSV 625
           FS  G S+L    P+Q     + P     F   +SLP +Y GK  A+   N     QN  
Sbjct: 587 FSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALEPGN----PQNPS 638

Query: 626 VFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSS-ELLHNVGQ 683
           +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CMQD++ ELLH  GQ
Sbjct: 639 LFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQ 697

Query: 684 IDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVF 743
           I+    T+ FVKVYKSGSVGRSLDISRFSSY+ELREELG+MF IEG  EDPLRSGWQLVF
Sbjct: 698 INSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVF 757

Query: 744 VDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           VD+END+LLLGDDPWE+FV+NVWYIKILSPEDV +MG+ G
Sbjct: 758 VDKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMGDHG 797


>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
          Length = 844

 Score = 1063 bits (2750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/842 (69%), Positives = 652/842 (77%), Gaps = 71/842 (8%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQ HEG+ KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGLVQQSHEGE-KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPS
Sbjct: 60  VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPS 119

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD+SLQPPAQEL+ARDLHDVEWKFR
Sbjct: 120 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFR 179

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIRRA RP T++PSSVL
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSVL 239

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHA+ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRM
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 361 TFPMYPSLFPLRLKRPWHPSTSS-------------------------FNDNRDETASGL 395
           TFPMYPSLFPLRLKRPWH  TSS                         F D R E  SGL
Sbjct: 360 TFPMYPSLFPLRLKRPWHAGTSSLHGIHPPFVSSPKLLVAINLKSLLVFTDGRGELGSGL 419

Query: 396 NWLR--GGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GD 450
            WLR  GG  +QGL  LN+ S+G+FPWMQQR++ + LG D+NQQYQAMLAAG+Q+   GD
Sbjct: 420 PWLRGGGGGEQQGLLPLNYPSVGLFPWMQQRLDLAQLGTDNNQQYQAMLAAGLQNMGGGD 479

Query: 451 PVRQQFMQLQQP---FQYLQQSGSQNP-LQL---KQQQHLLQ-QLNSQAEDRAQQQQQPQ 502
           P+RQQF+QLQ+P    QYLQQS S N  L L   +QQQHL+  Q    +E+  Q+Q+  +
Sbjct: 480 PLRQQFVQLQEPPPHHQYLQQSASHNSDLMLQQQQQQQHLMHAQTQIMSENLPQRQEVSK 539

Query: 503 -------------QHMYHDALQI-RTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISP 548
                        Q+ Y +AL++        +Q S++PSPSF KA+F D   +   + +P
Sbjct: 540 QQPGGGGGQQSVDQNAYLNALKMQNGQLQQWQQHSDMPSPSFMKADFTD---KFPTTATP 596

Query: 549 MQNMLGSLPEGSG-NLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSL-PSSYN 606
           MQ    S   G G NLLNFS  G S+L    P+Q +G  + P     F   +SL P +Y 
Sbjct: 597 MQQNSASPGSGHGSNLLNFSITGQSVL----PEQLMGEGWSPKASNTFSEPLSLPPQAYA 652

Query: 607 GKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSS---MPLGDSGF 663
           GK  A+   + N    N  VFGV    SGL LP+TV  F +S   G +    M LGDSGF
Sbjct: 653 GKSLALEPASANV---NPSVFGVD-PGSGLFLPSTVPRFASSSSGGDAEAYPMSLGDSGF 708

Query: 664 HNSMYG-CMQDSS-ELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 721
            NS+Y  CMQD++ ELLH VGQI     T+ FVKVYKSGSVGRSLDISRFSSY+ELREEL
Sbjct: 709 ENSLYNSCMQDTTHELLHGVGQISPSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREEL 768

Query: 722 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
           G+MF IEG  EDPLRSGWQLVFVD+END+LLLGDDPWE+FVSNVWYIKILSPEDVQ+MG+
Sbjct: 769 GKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVSNVWYIKILSPEDVQEMGD 828

Query: 782 QG 783
            G
Sbjct: 829 HG 830


>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
          Length = 801

 Score = 1055 bits (2729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/808 (68%), Positives = 628/808 (77%), Gaps = 47/808 (5%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M LSTSG   Q HEG+ KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MNLSTSGFGHQSHEGEKKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           V+ HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQM LQPL+ EEQKDTFVPIELGIPS
Sbjct: 61  VEGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMVLQPLTQEEQKDTFVPIELGIPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD++ QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLV GDSV+FI NE+NQLLLGIR A RP T++PSS+L
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHASRPQTIVPSSML 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNSCFTVF++PR+S SEFV+PL KY+KAVFHTR+SVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGI DLD VRW NSHWRSVKVGWDESTAGERQ R SLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGIGDLDSVRWPNSHWRSVKVGWDESTAGERQARASLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLRLKRPWHP  SS +D+R + ASGL W RGG GE G+  LN+ S  +FPW
Sbjct: 361 TFPMYPSLFPLRLKRPWHPGASSMHDSRGDIASGLTWFRGGAGENGMLPLNYPSASLFPW 420

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQSGSQNPLQ 476
           MQQ    S LG D NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S +   
Sbjct: 421 MQQ----SLLGTDQNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPNHQYLQQSASLHNSD 476

Query: 477 L------------KQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQR---- 520
           L            +  +HLLQ      E+       PQQ++  +     T +  Q     
Sbjct: 477 LLLQQHHQASSQQQLPRHLLQAQTQMTENL------PQQNLRQEVSNQVTGQPQQPNRVW 530

Query: 521 QQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSG---NLLNFSGAGPSMLR-Q 576
           Q S+L SPSF K++F D + + + + +P+Q    +L +GSG   NLLNFS  G S +  +
Sbjct: 531 QHSDLLSPSFMKSDFADLNNKFTSTANPVQQQNSTL-QGSGDGSNLLNFSITGQSSVHSE 589

Query: 577 QFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGL 636
           Q P Q    K+   +  +F   +SL  +Y G   ++   N    +QN  +FGV  D SGL
Sbjct: 590 QIPTQVWSLKHSHPETNEFSEPLSLRQAYGGTSPSLEPPN----TQNLSLFGVDSD-SGL 644

Query: 637 LLPTTVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVK 695
            LPTTV  F T S D   SSMPL DSGF NS+YG MQD++ELLH  GQ      T+ FVK
Sbjct: 645 FLPTTVPHFGTLSADADTSSMPLTDSGFQNSLYGSMQDTTELLHGAGQ------TKNFVK 698

Query: 696 VYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGD 755
           VYKSGSVGRSLDISRFSSY+ELREELG+MF I+G  ED  RSGWQLVFVD+E+DVLLLGD
Sbjct: 699 VYKSGSVGRSLDISRFSSYHELREELGKMFDIKGLLEDAFRSGWQLVFVDKEDDVLLLGD 758

Query: 756 DPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           DPWE+FV++VWYIKILSPEDVQKMGE G
Sbjct: 759 DPWESFVNSVWYIKILSPEDVQKMGEHG 786


>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 773

 Score = 1043 bits (2698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/796 (70%), Positives = 624/796 (78%), Gaps = 60/796 (7%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQGHEG+ KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGLGQQGHEGE-KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPS
Sbjct: 60  VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPS 119

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD++LQPPAQELIARDLHDVEWKFR
Sbjct: 120 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR A RP T++PSSVL
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHA+ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRM
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQSLGMFP 419
           TFPMYPSLFPLRLKRPWH  TSS  D R +  SGL WLRGG GEQ     LN+ S+G+FP
Sbjct: 360 TFPMYPSLFPLRLKRPWHAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFP 419

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQSGSQNP- 474
           WMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S N  
Sbjct: 420 WMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQSASHNSD 479

Query: 475 LQLKQ------QQHLLQQLNSQAEDRAQQQQQPQQHM----------------------Y 506
           L L+Q       +HL+      A+ +   +  PQQ+M                      Y
Sbjct: 480 LMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQPDQNAY 534

Query: 507 HDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLN 565
            +A +++   L Q +QQS +PSPSF K++F DSS + + + SP          G GNLLN
Sbjct: 535 LNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--------SGDGNLLN 586

Query: 566 FSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSV 625
           FS  G S+L    P+Q     + P     F   +SLP +Y GK  A+   N     QN  
Sbjct: 587 FSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALEPGN----PQNPS 638

Query: 626 VFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSS-ELLHNVGQ 683
           +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CMQD++ ELLH  GQ
Sbjct: 639 LFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQ 697

Query: 684 IDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVF 743
           I+    T+ FVKVYKSGSVGRSLDISRFSSY+ELREELG+MF IEG  EDPLRSGWQLVF
Sbjct: 698 INSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVF 757

Query: 744 VDRENDVLLLGDDPWE 759
           VD+END+LLLGDDPWE
Sbjct: 758 VDKENDILLLGDDPWE 773


>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
          Length = 821

 Score = 1043 bits (2696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/798 (69%), Positives = 625/798 (78%), Gaps = 60/798 (7%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLSTSGL QQGHEG+ KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MKLSTSGLGQQGHEGE-KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPS
Sbjct: 60  VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPS 119

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD++LQPPAQELIARDLHDVEWKFR
Sbjct: 120 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR A RP T++PSSVL
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHA+ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRM
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQSLGMFP 419
           TFPMYPSLFPLRLKRPWH  TSS  D R +  SGL WLRGG GEQ     LN+ S+G+FP
Sbjct: 360 TFPMYPSLFPLRLKRPWHAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFP 419

Query: 420 WMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQSGSQNP- 474
           WMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S N  
Sbjct: 420 WMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQSASHNSD 479

Query: 475 LQLKQ------QQHLLQQLNSQAEDRAQQQQQPQQHM----------------------Y 506
           L L+Q       +HL+      A+ +   +  PQQ+M                      Y
Sbjct: 480 LMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQPDQNAY 534

Query: 507 HDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLN 565
            +A +++   L Q +QQS +PSPSF K++F DSS + + + SP          G GNLLN
Sbjct: 535 LNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--------SGDGNLLN 586

Query: 566 FSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSV 625
           FS  G S+L    P+Q     + P     F   +SLP +Y GK  A+   N     QN  
Sbjct: 587 FSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALEPGN----PQNPS 638

Query: 626 VFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSS-ELLHNVGQ 683
           +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CMQD++ ELLH  GQ
Sbjct: 639 LFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQ 697

Query: 684 IDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVF 743
           I+    T+ FVKVYKSGSVGRSLDISRFSSY+ELREELG+MF IEG  EDPLRSGWQLVF
Sbjct: 698 INSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVF 757

Query: 744 VDRENDVLLLGDDPWEAF 761
           VD+END+LLLGDDPWE +
Sbjct: 758 VDKENDILLLGDDPWEYY 775


>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
          Length = 794

 Score = 1007 bits (2604), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/807 (67%), Positives = 617/807 (76%), Gaps = 51/807 (6%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S+SG+ Q G EG+ K LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TNKEV+ 
Sbjct: 6   SSSGIVQPGQEGEKKSLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVNG 65

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP 123
           HIPNYP+L PQLICQLHNVTMHAD+ETDEVYAQMTLQPL+ +EQKD+++P ELG+PSKQP
Sbjct: 66  HIPNYPSLSPQLICQLHNVTMHADMETDEVYAQMTLQPLNQQEQKDSYLPAELGVPSKQP 125

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
           TNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDF+ QPPAQEL+ARDLHDVEWKFRHIF
Sbjct: 126 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELVARDLHDVEWKFRHIF 185

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSD
Sbjct: 186 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSD 245

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           SMHIGLLAAAAHAAATNS FT+F+NPRASPSEFVIPL+KY KAVFHTR+S  MRFRMLFE
Sbjct: 246 SMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFHTRISDDMRFRMLFE 305

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           T+ESSVRRYMG ITGISDLDPVRWSNSHWRSVKV WDESTAGERQPRVSLWEIEPLTTFP
Sbjct: 306 TDESSVRRYMGRITGISDLDPVRWSNSHWRSVKVIWDESTAGERQPRVSLWEIEPLTTFP 365

Query: 364 MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQ 423
           MYPSLFPLRLKRPWHP   +F DN+D+ ++   WLRG   E+G  +LNFQ+ G+ PWMQ 
Sbjct: 366 MYPSLFPLRLKRPWHPGLPTFPDNKDDESNAFMWLRGNADERGFQSLNFQAFGIGPWMQP 425

Query: 424 RVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGS-QNPL---- 475
           R +P  LG D + QYQAM AA +Q   + DP +Q F+  QQP Q  QQS    NPL    
Sbjct: 426 RFDPLLLGTDPD-QYQAMAAAALQDIRNRDPTKQLFLNFQQPLQTPQQSSCGSNPLLQHQ 484

Query: 476 --QLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSKA 533
             Q  Q +  LQQ ++  E+  Q  Q  QQ  +H+  QI  +   Q Q S LP+    KA
Sbjct: 485 IIQQTQPRQFLQQAHAILENHPQSHQ--QQQTHHELFQISNN---QPQPSPLPTGLCQKA 539

Query: 534 NFMDSSTEISVSISP--MQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPS 590
            F DS++  S +  P  MQN+LGS+ PEGS  +L+F  AG S++  Q   Q   SK  PS
Sbjct: 540 VFSDSNSTFSSTPIPSGMQNILGSVCPEGSAQILSFPNAGQSVMVDQH-HQPWVSKCGPS 598

Query: 591 QVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVD 650
            V  F +S+SLP  + G++ +V             +  V  DS+  L P T  S      
Sbjct: 599 PVDPFGNSISLP-PFPGRECSV----------EQTIGNVTGDSNLSLTPFTAPS------ 641

Query: 651 PGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISR 710
                         NS+YGC+ +SS LL N GQ+D   PTRTFVKVYKSGSVGRSLDI++
Sbjct: 642 ------------LQNSLYGCIDESSGLLQNEGQMD--PPTRTFVKVYKSGSVGRSLDIAQ 687

Query: 711 FSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 770
           FSSY+ELREELGQMFG+ GK  DPLRSGWQLVFVDRENDVLLLGDDPWE+FV+NVWYIKI
Sbjct: 688 FSSYHELREELGQMFGLGGKLRDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKI 747

Query: 771 LSPEDVQKMGEQGVESFSPSSGQRANS 797
           LSP+DVQ MG+  VE  +P  G+R NS
Sbjct: 748 LSPDDVQNMGKHDVEPLNPMGGRRHNS 774


>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
          Length = 780

 Score =  979 bits (2530), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/802 (66%), Positives = 605/802 (75%), Gaps = 41/802 (5%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M LS+SG   Q HEG+ KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKE
Sbjct: 1   MNLSSSGFGHQSHEGEKKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           V+ HIPNYP LPPQLICQLHNVTMHAD+ETDEVYAQM LQPL+ EEQKDTFVPIELG+PS
Sbjct: 61  VEGHIPNYPTLPPQLICQLHNVTMHADLETDEVYAQMVLQPLTQEEQKDTFVPIELGVPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD++ QPPAQELIA+DLHD EWKFR
Sbjct: 121 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIAKDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLV GDSV+FI NE+NQLLLGIR A RP T++PSS+L
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHATRPQTIVPSSML 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNSCFTVF++PR+S SEFV+PL KY+KAVFHTR+SVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGI DLD V W NSHWRSVKVGWDESTAGERQ R SLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGIGDLDSVLWPNSHWRSVKVGWDESTAGERQARASLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLRLKRPWHP  SSF D+R +    L WLRGG GE GL  LN+ S  +FPW
Sbjct: 361 TFPMYPSLFPLRLKRPWHPGASSFQDSRGD----LTWLRGGAGENGLLPLNYPSPNVFPW 416

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQS-----GDPVRQQFMQLQQP-FQYLQQSGS--- 471
           MQQR++ S LG D NQQYQAMLAAG+Q+     GDP+RQQF+ LQ+P  QYLQQ  +   
Sbjct: 417 MQQRLDLSLLGTDQNQQYQAMLAAGLQNFGGGGGDPLRQQFVHLQEPNHQYLQQQSAPII 476

Query: 472 -QNPLQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSF 530
             + LQ   QQ  + +   QA+ +   +  PQQ+M  +            Q S+L SPS 
Sbjct: 477 HSSDLQQHHQQQQMPRHLLQAQPQILTENLPQQNMRQEVSNQAQQPDRVWQHSDLLSPSD 536

Query: 531 SKANFMDSSTEISVSISPMQNM-LGSLPEGSGNLLNFSGAGPSMLRQQFPQQ--SLGSKY 587
               F  ++T   V     QN+ L    + S +LLNFS  G S   +Q P    SL   +
Sbjct: 537 FTNKFTSAATNPQVQ---QQNLTLQGSGDSSSHLLNFSITGQS---EQLPTHDWSLKHSH 590

Query: 588 EPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTT 647
            P +   F   +SL   Y     ++        +QN  +FGV  D SGL LPTTV  F  
Sbjct: 591 HP-ETNYFSEPLSLGQGYGRASPSL---EPPPSTQNLSLFGVDSD-SGLFLPTTVPRFGD 645

Query: 648 SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLD 707
           +     SSMPL DSGF N+    +Q+++E+  + G    +  T  FVKVYKSGSVGRSLD
Sbjct: 646 T-----SSMPLADSGFQNT----LQETTEVAAHGG----VEHTNNFVKVYKSGSVGRSLD 692

Query: 708 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 767
           ISRFSSYNELREELG+MF I+G  ED  RSGWQLVFVD+E+D+LLLGDDPWE+FV++VWY
Sbjct: 693 ISRFSSYNELREELGRMFDIKGLLEDAFRSGWQLVFVDKEDDILLLGDDPWESFVNSVWY 752

Query: 768 IKILSPEDVQKMGEQGVESFSP 789
           IKILSP+DV KMGE G  S  P
Sbjct: 753 IKILSPDDVHKMGEHGEGSSFP 774


>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
          Length = 809

 Score =  944 bits (2441), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/807 (64%), Positives = 604/807 (74%), Gaps = 36/807 (4%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S + + QQ  E + KCLNSELWHACAGPLV LPTV TRVVYFPQGHSEQVAA+TNKEVD 
Sbjct: 5   SAASIGQQPPEEEKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDG 64

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP 123
           HIPNYPNLPPQLICQLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQP
Sbjct: 65  HIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQP 124

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
           TNYFCKTLTASDTSTHGGFSVPRRAAE+VFP LDF+ QPP QELIARD+HDVEWKFRHIF
Sbjct: 125 TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPVQELIARDIHDVEWKFRHIF 184

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSD
Sbjct: 185 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSD 244

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           SMHIGLLAAAAHAAATNS FT+FFNPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFE
Sbjct: 245 SMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFE 304

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           TEESSVRRYMGTIT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFP
Sbjct: 305 TEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 364

Query: 364 MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQ 423
           MYPSLFPLR+K PW+   ++ +D+    ++ L WLRG  GE G  +LNFQS G+  W QQ
Sbjct: 365 MYPSLFPLRVKHPWYSGVAALHDD----SNALMWLRGVAGEGGFQSLNFQSPGVGSWGQQ 420

Query: 424 RVEPSFLGNDHNQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK---- 478
           R+ PS L NDH+Q    + AA     D  ++QQF+ LQQP Q  Q+  + NPL  +    
Sbjct: 421 RLHPSLLSNDHDQYQAVVAAAAASQSDGYLKQQFLHLQQPMQSPQEQCNLNPLLQQQILQ 480

Query: 479 ----------QQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQ-IRTDELLQRQQS---- 523
                       Q++   LN  A  +  QQ Q  QH ++D  Q I+ D+  Q   S    
Sbjct: 481 QGSQQQMVSPDAQNIQSVLNPNAIQQQLQQFQQMQHAHNDQKQKIQPDQPYQVPSSAVLS 540

Query: 524 ---NLPSPSFSKANFMD--SSTEISVSISPMQNMLGS-LPEGSGNLLNFSGAGPSMLRQQ 577
              +LPS    K  F D   ++   +S S  +NML S   +GS   ++ S     ++ +Q
Sbjct: 541 SPTSLPSHLREKFGFSDPNVNSSSFISSSSNENMLESNFLQGSSKSVDLSRFNQPVVSEQ 600

Query: 578 FPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLL 637
             QQ+   K+  SQ   F  S+SL +S   KD  V  +    D QN  +F   +DSS LL
Sbjct: 601 QQQQAWKQKFICSQSMSFGGSVSL-NSPTTKDGPVDNK-IGRDVQNQTLFSPQVDSSSLL 658

Query: 638 LPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKV 696
               V + T++V D  +S++P G +   + MYGC+ DSS LL N G+ D    TRTFVKV
Sbjct: 659 Y-NMVPNLTSNVADNNISTIPSGSTYLQSPMYGCLDDSSGLLQNTGENDPT--TRTFVKV 715

Query: 697 YKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDD 756
           YKSGSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDD
Sbjct: 716 YKSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDD 775

Query: 757 PWEAFVSNVWYIKILSPEDVQKMGEQG 783
           PWE+FV++VWYIKILSPEDV KMG+ G
Sbjct: 776 PWESFVNSVWYIKILSPEDVHKMGKPG 802


>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
          Length = 819

 Score =  939 bits (2428), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/804 (64%), Positives = 604/804 (75%), Gaps = 54/804 (6%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 25  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 84

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 85  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 144

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 145 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 204

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 205 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 264

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 265 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 324

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 325 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 384

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L  DH+ Q
Sbjct: 385 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSTDHD-Q 439

Query: 438 YQAMLAAGM---QSGDPVRQQFMQLQQPFQYLQQSGSQNPL--------------QLKQQ 480
           YQA++AA     QSG  V+QQF+ LQQP Q  Q+  + NPL                 + 
Sbjct: 440 YQAVVAAAAAASQSGGFVKQQFLHLQQPMQSPQEHCNLNPLLHQQILQQASQQQIISPEA 499

Query: 481 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 526
           Q++   L+  A              ++  +Q+ QP Q     + Q+ +  +L    S LP
Sbjct: 500 QNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPSSAVLPSPTS-LP 553

Query: 527 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSG---NLLNFSGAGPSMLRQQFPQ 580
           S    K  F D  +++   ++ S   NML  S  +GS    +L  F+    S  +QQ  Q
Sbjct: 554 SHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 613

Query: 581 QSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPT 640
           Q+   K+  SQ   F  S+ L +S   KD +V  +    D QN  +F   +DSS LL   
Sbjct: 614 QAWKQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY-N 670

Query: 641 TVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 699
            V + T++V D  +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYKS
Sbjct: 671 MVPNLTSNVADGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGENDPT--TRTFVKVYKS 728

Query: 700 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 759
           GSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE
Sbjct: 729 GSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWE 788

Query: 760 AFVSNVWYIKILSPEDVQKMGEQG 783
           +FV++VWYIKILSPEDV KMG+QG
Sbjct: 789 SFVNSVWYIKILSPEDVHKMGKQG 812


>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
          Length = 821

 Score =  938 bits (2424), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/805 (63%), Positives = 598/805 (74%), Gaps = 54/805 (6%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 25  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 84

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 85  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 144

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 145 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 204

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 205 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 264

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 265 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 324

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 325 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 384

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L  DH+ Q
Sbjct: 385 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSTDHD-Q 439

Query: 438 YQAMLAAGM---QSGDPVRQQFMQLQQPFQYLQQSGSQNPL--------------QLKQQ 480
           YQA++AA     QSG  V+QQF+ LQQP Q  Q+  + NPL                 + 
Sbjct: 440 YQAVVAAAAAASQSGGFVKQQFLHLQQPMQSPQEHCNLNPLLHQQILQQASQQQIISPEA 499

Query: 481 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 526
           Q++   L+  A              ++  +Q+ QP Q     + Q+ +  +L    S LP
Sbjct: 500 QNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPSSAVLPSPTS-LP 553

Query: 527 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSG-----AGPSMLRQQF 578
           S    K  F D  +++   ++ S   NML  S  +GS   ++ S      A     +QQ 
Sbjct: 554 SHLREKFGFSDPNANSSNFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 613

Query: 579 PQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLL 638
            QQ+   K+  SQ   F  S  L +S   KD +V  +    D QN  +F   +DSS LL 
Sbjct: 614 QQQAWKQKFMGSQSVSFGGSF-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY 671

Query: 639 PTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYK 698
               +  +   D  +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYK
Sbjct: 672 NMVPNLASNVADGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGENDPT--TRTFVKVYK 729

Query: 699 SGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 758
           SGSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPW
Sbjct: 730 SGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPW 789

Query: 759 EAFVSNVWYIKILSPEDVQKMGEQG 783
           E+FV++VWYIKILSPEDV KMG+QG
Sbjct: 790 ESFVNSVWYIKILSPEDVHKMGKQG 814


>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
          Length = 818

 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/803 (64%), Positives = 602/803 (74%), Gaps = 53/803 (6%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 25  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 84

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 85  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 144

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 145 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 204

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 205 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 264

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 265 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 324

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 325 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 384

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L NDH+ Q
Sbjct: 385 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSNDHD-Q 439

Query: 438 YQAMLAAGM---QSGDPVRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQ 480
           YQA++AA     QSG  ++QQF+ LQQP Q  Q+  + NPL  +              + 
Sbjct: 440 YQAVVAAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQAGQQQIISPEA 499

Query: 481 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 526
           Q++   L+  A              ++  +Q+ QP Q     + Q+ +  +L    S LP
Sbjct: 500 QNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPSSAVLPSPTS-LP 553

Query: 527 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSL 583
           S    K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ  
Sbjct: 554 SHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 613

Query: 584 G--SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 641
               K+  SQ   F  S+ L +S   KD ++  +    D QN  +F   +DSS LL    
Sbjct: 614 AWKQKFMGSQSVSFGGSV-LHNSPTSKDGSIENK-IGRDVQNQSLFSPQVDSSSLLY-NM 670

Query: 642 VSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG 700
           V + T++V D  +S++P G +   N+MY C+ DSS LL N G+ D    TRTFVKVYKSG
Sbjct: 671 VPNLTSNVADGNLSTIPSGSTYLQNAMYACLDDSSGLLQNTGENDPT--TRTFVKVYKSG 728

Query: 701 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 760
           SVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+
Sbjct: 729 SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWES 788

Query: 761 FVSNVWYIKILSPEDVQKMGEQG 783
           FV++VWYIKILSPEDV KMG+QG
Sbjct: 789 FVNSVWYIKILSPEDVHKMGKQG 811


>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
 gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
          Length = 816

 Score =  936 bits (2418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/799 (63%), Positives = 596/799 (74%), Gaps = 48/799 (6%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 85

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 145

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 146 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 205

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 206 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 265

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 266 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 325

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 326 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 385

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L +DH+Q 
Sbjct: 386 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSSDHDQY 441

Query: 438 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQQH 482
              + AA        ++QQF+ LQQP Q  Q+  + NPL  +                Q+
Sbjct: 442 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQASQQQIINPDAQN 501

Query: 483 LLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSP 528
           +   L+  A              ++  +Q+ QP Q     + Q+ T  +L    S LPS 
Sbjct: 502 IQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPTSAVLPSPTS-LPSH 555

Query: 529 SFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGS 585
              K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ+   
Sbjct: 556 LREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQAWKQ 615

Query: 586 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 645
           K+  SQ   F  S+ L +S   KD +V  +    D QN  +F   +DSS LL    V + 
Sbjct: 616 KFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY-NMVPNL 672

Query: 646 TTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGR 704
           T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGR
Sbjct: 673 TSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND--PATRTFVKVYKSGSVGR 730

Query: 705 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 764
           SLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++
Sbjct: 731 SLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNS 790

Query: 765 VWYIKILSPEDVQKMGEQG 783
           VWYIKILSPEDV KMG+QG
Sbjct: 791 VWYIKILSPEDVHKMGKQG 809


>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
          Length = 818

 Score =  936 bits (2418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/803 (63%), Positives = 602/803 (74%), Gaps = 53/803 (6%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 25  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 84

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 85  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 144

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 145 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 204

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 205 IFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 264

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 265 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 324

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 325 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 384

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L NDH+ Q
Sbjct: 385 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSNDHD-Q 439

Query: 438 YQAMLAAGM---QSGDPVRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQ 480
           YQA++AA     QSG  ++QQF+ LQQP Q  Q+  + NPL  +              + 
Sbjct: 440 YQAVVAAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQAGQQQIISPEA 499

Query: 481 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 526
           Q++   L+  A              ++  +Q+ QP Q     + Q+ +  +L    S LP
Sbjct: 500 QNIQMMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPSSAVLPSPTS-LP 553

Query: 527 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSL 583
           S    K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ  
Sbjct: 554 SHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 613

Query: 584 G--SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 641
               K+  SQ   F  S+ L +S   KD ++  +    D QN  +F   +DSS LL    
Sbjct: 614 AWKQKFMGSQSVSFGGSV-LHNSPTSKDGSIENK-IGRDVQNQSLFSPQVDSSSLLY-NM 670

Query: 642 VSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG 700
           V + T++V D  +S++P G +   N+MY C+ DSS LL N G+ D    TRTFVKVYKSG
Sbjct: 671 VPNLTSNVADGNLSTIPSGSTYLQNAMYACLDDSSGLLQNTGENDPT--TRTFVKVYKSG 728

Query: 701 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 760
           SVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+
Sbjct: 729 SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWES 788

Query: 761 FVSNVWYIKILSPEDVQKMGEQG 783
           FV++VWYIKILSPEDV KMG+QG
Sbjct: 789 FVNSVWYIKILSPEDVHKMGKQG 811


>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 817

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/796 (64%), Positives = 596/796 (74%), Gaps = 39/796 (4%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQLIC
Sbjct: 24  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLIC 83

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 84  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 143

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 144 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWS 203

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIR A RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 204 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAA 263

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASP+EFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 264 ATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 323

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 324 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 383

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   ++ +D+    ++ L WLRG TGE G  +LNFQS G+  W QQR+ PS L NDH+Q 
Sbjct: 384 YSGLAALHDD----SNALMWLRGVTGEGGFHSLNFQSPGIGSWGQQRLHPSLLSNDHDQY 439

Query: 438 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP--------------LQLKQQQH 482
              + AA        ++QQF+ LQQP Q  Q+  + NP              +     Q+
Sbjct: 440 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEQCNLNPLLQQQILQQASQQQMVSSDAQN 499

Query: 483 LLQQLNSQAEDRAQQQQQPQQHMYHDALQ-IRTDELLQRQQSN-LPSPSF------SKAN 534
           +   LN  A  +   Q Q  QH ++D  Q I+ D+  Q   S  LPSP+        K  
Sbjct: 500 IQSVLNPGAIQQQLHQLQQMQHTHNDQKQKIQPDQQYQVASSAVLPSPTSLPSHLREKFG 559

Query: 535 FMD--SSTEISVSISPMQNMLGS----LPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYE 588
           F D   ++   +S S  +NML S    +   S +L  F+    S  +Q   QQ+   K+ 
Sbjct: 560 FSDPNVNSSSFISSSSNENMLESNFLQVSSKSVDLSRFNQPVVSEQQQPQQQQAWKQKFM 619

Query: 589 PSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTS 648
            SQ   F  S+SL +S   KD +V  +    D QN  +F   +DSS LL    V + T++
Sbjct: 620 GSQSMSFGGSVSL-NSPTSKDGSVDNK-VGRDVQNQSLFSPQVDSSSLLY-NMVPNLTSN 676

Query: 649 V-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLD 707
           V D  +S+ P G +   + MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLD
Sbjct: 677 VADNNISAFPSGSTYLQSPMYGCLDDSSGLLQNTGENDPT--TRTFVKVYKSGSVGRSLD 734

Query: 708 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 767
           I+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWY
Sbjct: 735 ITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWY 794

Query: 768 IKILSPEDVQKMGEQG 783
           IKILSPEDV KMG+ G
Sbjct: 795 IKILSPEDVHKMGKPG 810


>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
 gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
 gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
 gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
          Length = 818

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/801 (63%), Positives = 595/801 (74%), Gaps = 50/801 (6%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 85

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 145

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 146 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 205

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 206 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 265

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 266 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 325

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 326 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 385

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L +DH+Q 
Sbjct: 386 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSSDHDQY 441

Query: 438 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQQH 482
              + AA        ++QQF+ LQQP Q  Q+  + NPL  +                Q+
Sbjct: 442 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQASQQQIINPDAQN 501

Query: 483 LLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSP 528
           +   L+  A              ++  +Q+ QP Q     + Q+ T  +L    S LPS 
Sbjct: 502 IQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPTSAVLPSPTS-LPSH 555

Query: 529 SFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSLG- 584
              K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ    
Sbjct: 556 LREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQAW 615

Query: 585 -SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVS 643
             K+  SQ   F  S+ L +S   KD +V  +    D QN  +F   +DSS LL    V 
Sbjct: 616 KQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY-NMVP 672

Query: 644 SFTTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSV 702
           + T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYKSGSV
Sbjct: 673 NLTSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND--PATRTFVKVYKSGSV 730

Query: 703 GRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 762
           GRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV
Sbjct: 731 GRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFV 790

Query: 763 SNVWYIKILSPEDVQKMGEQG 783
           ++VWYIKILSPEDV KMG+QG
Sbjct: 791 NSVWYIKILSPEDVHKMGKQG 811


>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
          Length = 795

 Score =  930 bits (2403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/803 (63%), Positives = 596/803 (74%), Gaps = 50/803 (6%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QL
Sbjct: 1   EKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQL 60

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASD
Sbjct: 61  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASD 120

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTG
Sbjct: 121 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTG 180

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 181 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 240

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AAATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 241 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 300

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           IT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K 
Sbjct: 301 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKH 360

Query: 376 PWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHN 435
           PW+   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L +DH+
Sbjct: 361 PWYSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSSDHD 416

Query: 436 QQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQ 480
           Q    + AA        ++QQF+ LQQP Q  Q+  + NPL  +                
Sbjct: 417 QYQAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQASQQQIINPDA 476

Query: 481 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 526
           Q++   L+  A              ++  +Q+ QP Q     + Q+ T  +L    S LP
Sbjct: 477 QNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPTSAVLPSPTS-LP 530

Query: 527 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSL 583
           S    K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ  
Sbjct: 531 SHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 590

Query: 584 G--SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 641
               K+  SQ   F  S+ L +S   KD +V  +    D QN  +F   +DSS LL    
Sbjct: 591 AWKQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY-NM 647

Query: 642 VSSFTTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG 700
           V + T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYKSG
Sbjct: 648 VPNLTSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND--PATRTFVKVYKSG 705

Query: 701 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 760
           SVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+
Sbjct: 706 SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWES 765

Query: 761 FVSNVWYIKILSPEDVQKMGEQG 783
           FV++VWYIKILSPEDV KMG+QG
Sbjct: 766 FVNSVWYIKILSPEDVHKMGKQG 788


>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
          Length = 833

 Score =  924 bits (2389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/816 (62%), Positives = 596/816 (73%), Gaps = 65/816 (7%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 85

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSP-----------------EEQKDTFVPIELGIPS 120
           QLH+VTMHADVETDEVYAQMTLQPL+P                 +EQ D ++P E+GI S
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMS 145

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFR
Sbjct: 146 KQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFR 205

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 206 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVL 265

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRM
Sbjct: 266 SSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRM 325

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTIT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLT
Sbjct: 326 LFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLT 385

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLR+K PW+   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W
Sbjct: 386 TFPMYPSLFPLRVKHPWYSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSW 441

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK- 478
            QQR+ PS L +DH+Q    + AA        ++QQF+ LQQP Q  Q+  + NPL  + 
Sbjct: 442 GQQRLHPSLLSSDHDQYQAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQ 501

Query: 479 -------------QQQHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQ 511
                          Q++   L+  A              ++  +Q+ QP Q     + Q
Sbjct: 502 ILQQASQQQIINPDAQNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQ 556

Query: 512 IRTDELLQRQQSNLPSPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSG 568
           + T  +L    S LPS    K  F D  +++   ++ S   NML  S  +GS   ++ S 
Sbjct: 557 VPTSAVLPSPTS-LPSHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSR 615

Query: 569 AGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFG 628
               +  +Q  QQ+   K+  SQ   F  S+ L +S   KD +V  +    D QN  +F 
Sbjct: 616 FNQPVASEQQQQQAWKQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFS 673

Query: 629 VHIDSSGLLLPTTVSSFTTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQL 687
             +DSS LL    V + T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D  
Sbjct: 674 PQVDSSSLLY-NMVPNLTSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND-- 730

Query: 688 TPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRE 747
             TRTFVKVYKSGSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRE
Sbjct: 731 PATRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 790

Query: 748 NDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           NDVLLLGDDPWE+FV++VWYIKILSPEDV KMG+QG
Sbjct: 791 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQG 826


>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
          Length = 816

 Score =  924 bits (2388), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/796 (64%), Positives = 595/796 (74%), Gaps = 40/796 (5%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQLIC
Sbjct: 24  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLIC 83

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 84  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 143

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HDVEWKFRHIFRG PKRHLLTTGWS
Sbjct: 144 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLLTTGWS 202

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIR A RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 203 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAA 262

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASP+EFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 263 ATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 322

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 323 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 382

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   ++ +D+    ++ L WLRG TGE G  +LNFQS G+  W QQR+ PS L NDH+Q 
Sbjct: 383 YSGLAALHDD----SNALMWLRGVTGEGGFHSLNFQSPGIGSWGQQRLHPSLLSNDHDQY 438

Query: 438 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP--------------LQLKQQQH 482
              + AA        ++QQF+ LQQP Q  Q+  + NP              +     Q+
Sbjct: 439 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEQCNLNPLLQQQILQQASQQQMVSSDAQN 498

Query: 483 LLQQLNSQAEDRAQQQQQPQQHMYHDALQ-IRTDELLQRQQSN-LPSPSF------SKAN 534
           +   LN  A  +   Q Q  QH ++D  Q I+ D+  Q   S  LPSP+        K  
Sbjct: 499 IQSVLNPGAIQQQLHQLQQMQHTHNDQKQKIQPDQQYQVASSAVLPSPTSLPSHLREKFG 558

Query: 535 FMD--SSTEISVSISPMQNMLGS----LPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYE 588
           F D   ++   +S S  +NML S    +   S +L  F+    S  +Q   QQ+   K+ 
Sbjct: 559 FSDPNVNSSSFISSSSNENMLESNFLQVSSKSVDLSRFNQPVVSEQQQPQQQQAWKQKFM 618

Query: 589 PSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTS 648
            SQ   F  S+SL +S   KD +V  +    D QN  +F   +DSS LL    V + T++
Sbjct: 619 GSQSMSFGGSVSL-NSPTSKDGSVDNK-VGRDVQNQSLFSPQVDSSSLLY-NMVPNLTSN 675

Query: 649 V-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLD 707
           V D  +S+ P G +   + MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLD
Sbjct: 676 VADNNISAFPSGSTYLQSPMYGCLDDSSGLLQNTGENDPT--TRTFVKVYKSGSVGRSLD 733

Query: 708 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 767
           I+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWY
Sbjct: 734 ITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWY 793

Query: 768 IKILSPEDVQKMGEQG 783
           IKILSPEDV KMG+ G
Sbjct: 794 IKILSPEDVHKMGKPG 809


>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
          Length = 836

 Score =  923 bits (2386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/823 (61%), Positives = 599/823 (72%), Gaps = 57/823 (6%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS+SG   Q  EG+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE
Sbjct: 1   MRLSSSGFAHQTEEGEKKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELGIP 119
           VD+HIPNYP+L PQLICQLHNVTMHADVETDEVYAQMTLQPLSP+EQK+   +P ELG P
Sbjct: 61  VDAHIPNYPSLAPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSP 120

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD++ QPPAQELIARDLH  EWKF
Sbjct: 121 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKF 180

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHIFRGQPKRHLLTTGWSVFVSAKRL+AGDSVLFIWNEKNQLLLGIRRA RP T+MPSSV
Sbjct: 181 RHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSV 240

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           LSSDSMHIGLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KY KAV+HTRVSVGMRFR
Sbjct: 241 LSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFR 300

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           MLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPL
Sbjct: 301 MLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRD---ETASGLNWLRGGTGEQGLTTLNFQSLG 416
           TTFPMYPS FPLRLKRPW  +  SF+ ++D      S L WLRG  G+QG+ +LNFQ  G
Sbjct: 361 TTFPMYPSPFPLRLKRPWPSALPSFHAHKDGDMSINSPLMWLRGDIGDQGIQSLNFQGYG 420

Query: 417 MFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVR---QQFMQLQQPFQ------ 464
           + PWMQ R++ S LG   N Q QA+ AA +Q   + DP +   Q  +Q QQP        
Sbjct: 421 LTPWMQPRLDASMLGLQSNMQ-QAIAAASLQELRALDPSKHPAQSLLQFQQPQNVSNSPA 479

Query: 465 --YLQQSGSQNPLQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQ 522
             +  Q    N  +L  QQH+ + +++ ++  +  Q  P       +LQ           
Sbjct: 480 SVFRGQIFCNNSCRLSDQQHIPKVISALSQLSSPTQSLP------PSLQ----------- 522

Query: 523 SNLPSPSFSKANFMDS-STEISVS-ISPMQNMLGSLP-EGSGNLLNFSGAGPSMLRQQ-F 578
             +PSP   +  F DS    I+ S +S MQ++LGS   +G+ +LLN  G+ P +     F
Sbjct: 523 -TIPSP-IQQQIFPDSVGNPITTSDVSTMQSLLGSFSQDGTSHLLNLHGSNPVISSSAFF 580

Query: 579 PQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLL 638
           P+Q       PS     V    LP     ++ A    N +  S     F    ++  + +
Sbjct: 581 PKQVAVEPPLPSGTTQCV----LPQV---EELATPPSNASELSTLLPPFPGRDENDSVSM 633

Query: 639 PTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVY 697
           P +  +F  +  PG +  PL      +S   C+ D S  L +   ++Q+  PTRTFVKV+
Sbjct: 634 PFSTPNFANA--PG-TDFPLNSDMTTSS---CI-DESGFLQSSENLEQVNPPTRTFVKVH 686

Query: 698 KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDP 757
           K GS GRSLDI++FSSY+ELR ELG+MFG+EG+ EDPLRSGWQLVFVDRENDVLLLGDDP
Sbjct: 687 KLGSFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDRENDVLLLGDDP 746

Query: 758 WEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN 800
           W+ FV+NVWYIKILSP +VQ+MG++G+   +P    R ++ GN
Sbjct: 747 WQEFVNNVWYIKILSPLEVQQMGKEGINVPNPIPSHRISNSGN 789


>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
          Length = 838

 Score =  913 bits (2359), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/830 (60%), Positives = 589/830 (70%), Gaps = 73/830 (8%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLS+SG   +G EG+ +CLNSELWHACAGPLVSLP VG+RVVY PQGHSEQVAA+TNKE
Sbjct: 1   MKLSSSGSNPRGLEGEKRCLNSELWHACAGPLVSLPAVGSRVVYLPQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           +D+HIPNYP+LPPQLICQLH+VTMHADVETDEVYAQMTLQPL+ +EQKD +VP  LG PS
Sbjct: 61  IDAHIPNYPSLPPQLICQLHDVTMHADVETDEVYAQMTLQPLTQQEQKDAYVPTVLGFPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHDVEWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FIWN+KNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDKNQLLLGIRRATRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNS FT+F+NPRASPSEFVIP  K+ KAV+HTR+SVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPFAKFAKAVYHTRISVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEES VRRYMGTITG  DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLW+IEPLT
Sbjct: 301 LFETEESGVRRYMGTITGKCDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWDIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQ--GLTTLNFQSLGM- 417
           TFPMYPS F LRLKRPW P   S  D++D+  + + WLRG  GE+   L + + Q+LG+ 
Sbjct: 361 TFPMYPSPFALRLKRPWQPGLPSLYDDKDDEGNPVMWLRGDNGERIPALQSPSCQNLGIG 420

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPF----------- 463
            PWMQ R + S  G + N  YQA+ A+ +Q   SGD V+  F+Q QQ F           
Sbjct: 421 NPWMQPRPDLSLQGMESN-FYQALAASALQEIRSGDLVKAPFLQFQQQFNAQPQYQCFSN 479

Query: 464 -----QYLQQSGS------QNPL--QLKQQQHLLQ-QLNSQAEDRAQQQQ--QPQQHMYH 507
                Q+LQQS S      QNP   +   Q HLLQ QLN    +    +Q   P      
Sbjct: 480 PLLQRQFLQQSNSQKSVTHQNPTVNENMNQTHLLQSQLNHSFGNPIHHEQFHVPNATTAL 539

Query: 508 DALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEIS---VSISPMQNMLGSL-PEGSGNL 563
             L I     L +  ++    +F+ +N   SS + +    S+S +++++G    + +  L
Sbjct: 540 SQLAISNSCSLSQPTTHGRPSAFADSNPSLSSFQTADSNPSLSSLRSVMGPFYSDENATL 599

Query: 564 LNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQN 623
           LN       M+              P QV    H+           + V  EN  +D+Q 
Sbjct: 600 LNMEKTSQGMI-------------HPQQVSFHTHT---------PQSMVEHENGTSDTQG 637

Query: 624 SVVFGVHIDSSGLLLPTTVSSFTT-----SVDPGVSSMPLGDSGFHNS---MYGCMQDSS 675
            ++FGV+IDSS L+LP + S+        S D G+  +     GF  +    +GC  DS 
Sbjct: 638 PLLFGVNIDSSSLILPNSDSTLRLRTMEGSADSGL--LQFSAQGFQAASIGAFGCPNDSG 695

Query: 676 ELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPL 735
            LLHN+ Q     P    VK+YK+G VGR+LDIS+FSSY ELR ++  MFG+EG+ +DPL
Sbjct: 696 -LLHNMEQRKPHNP--ILVKIYKTGCVGRTLDISQFSSYEELRGKVADMFGLEGQLDDPL 752

Query: 736 RSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           RSGWQLVFVDREND LLLGD PWEAFV+NVWYIKILSP D+Q MG  GV+
Sbjct: 753 RSGWQLVFVDRENDALLLGDGPWEAFVNNVWYIKILSPHDIQMMGTNGVD 802


>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
          Length = 907

 Score =  908 bits (2346), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/905 (58%), Positives = 624/905 (68%), Gaps = 106/905 (11%)

Query: 6   SGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHI 65
           +G  QQ  EGD KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HI
Sbjct: 10  TGFNQQTPEGDKKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHI 69

Query: 66  PNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGIPSKQPT 124
           PNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLS ++QKD ++ P ELG  SKQPT
Sbjct: 70  PNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQPT 129

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           NYFCKTLTASDTSTHGGFSVPRRAAEKVFP+LD+S  PPAQELIARDLHD EWKFRHIFR
Sbjct: 130 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFR 189

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP T MPSSVLSSDS
Sbjct: 190 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDS 249

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           MHIGLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KY+KAV+HTRVSVGMRFRMLFET
Sbjct: 250 MHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFET 309

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
           EESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM
Sbjct: 310 EESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 369

Query: 365 YPSLFPLRLKRPWHPSTSSFNDNRD---ETASGLNWLRGGTGEQGLTTLNFQSLGMFPWM 421
           YPS FP+RLKRPW     SF+  +D      S + WL+GG G+ G+ +LNFQS G+ PW+
Sbjct: 370 YPSAFPMRLKRPWPSGLPSFHGLQDGDLNINSPMMWLQGGVGDLGVQSLNFQSFGVAPWI 429

Query: 422 QQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQ-QSGSQNPLQLKQQ 480
           Q R + S +     + YQ M AA +Q    V    +  Q   Q+ Q Q+ S  P  L Q+
Sbjct: 430 QPRFDTS-MPALQPEMYQTMAAAALQEMRTVESSKLASQSHLQFQQSQNVSNGPAALIQR 488

Query: 481 QHLLQQLNSQ-------AEDRAQQQQQ-PQQHMYH------------------DALQIRT 514
           Q +LQQ N Q        E++A  Q Q  QQH+ H                       + 
Sbjct: 489 Q-MLQQSNLQHALLQNFQENQASTQAQFLQQHLQHRNQYTGQQLQQHQPQLQQVQQPKQL 547

Query: 515 DELLQRQQ-----SNLP---------SPSFS--------KANFMDSSTEISVS-ISPMQN 551
           +EL   QQ     S LP         SPS          +A        I+ S +S M +
Sbjct: 548 NELSAPQQIPNVISALPHLTSVAPSQSPSLQPISSQCQQQAFSEPLGNSIAASDVSSMHS 607

Query: 552 MLGSLP-EGSGNLLNFSGAGP----SMLRQQF---PQQSLGSKY----EPSQVRDFVHSM 599
           ++GSL  +G  +LLN +G+ P    ++L ++    PQ S G+ +    +  Q+R    ++
Sbjct: 608 VIGSLSQDGGSHLLNSNGSNPVISPALLSKRAAIDPQLSSGAAHCALPQVEQLRTTQSTV 667

Query: 600 S----LPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFT---TSVDPG 652
           S    L + ++G++ +  T     D QN+++FGV+IDSS  +L   + +     T  DP 
Sbjct: 668 SDLATLLAPFSGREYS--TYQGANDPQNNLLFGVNIDSSTFMLQHGIPNLRNIGTENDP- 724

Query: 653 VSSMPLGDSGFHNSM------------YGCMQDSSELLHNVGQIDQLTP-TRTFVKVYKS 699
             SMP   S F ++               C+ D S  L +   +DQ+ P TRTFVKV+KS
Sbjct: 725 -LSMPFAASTFTSATGSDIPLNSDMTASSCV-DESGFLQSSENVDQVNPSTRTFVKVHKS 782

Query: 700 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 759
           GS GRSLDIS+FSSY+ELR EL ++F +EG  EDP RSGWQLVF DRENDVLLLGDDPW+
Sbjct: 783 GSYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRENDVLLLGDDPWQ 842

Query: 760 AFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR---ANSRGNC----------GRDPV 806
            FV+NVWYIKILSP +VQ+MG++G+   +    Q+   +NS G+           G   +
Sbjct: 843 EFVNNVWYIKILSPLEVQQMGKEGLSPAASVPCQKLSNSNSDGHMNTQGFRNSSNGIASM 902

Query: 807 GSLEY 811
           GSL+Y
Sbjct: 903 GSLDY 907


>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
          Length = 895

 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/912 (57%), Positives = 616/912 (67%), Gaps = 118/912 (12%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS++G   Q  EG+ K LNSELWHACAGPLVSLP VGTRVVYFPQGHSEQVAA+TNKE
Sbjct: 1   MRLSSAGFSPQSQEGEKKVLNSELWHACAGPLVSLPAVGTRVVYFPQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPN+P+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKD ++P  LG P+
Sbjct: 61  VDAHIPNHPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPN 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA R  TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRQQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KY+KAV+HT +SVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCISVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDP RW NSHWRSVKVGWDESTAGERQPRVSLWE+EPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS F LRLKRPW P   SFN  RD+     S L WL+G  G++G+ +LNF  +G+
Sbjct: 361 TFPMYPSPFQLRLKRPWTPGLPSFNGMRDDDLGMNSQLVWLQGNNGDRGMQSLNFPGMGV 420

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVR---QQFMQLQQPFQYLQQSGS 471
            PWMQ R++ S +G   +  YQAM AA +Q   + DP R      +Q QQP Q L  S  
Sbjct: 421 TPWMQPRLDASMIG-LQSDMYQAMAAAALQEMRAVDPSRPLPTSLLQFQQP-QSLPNSNR 478

Query: 472 QNPL---QLKQQQHLLQQLNSQAEDRAQQQQQPQ-------------------------- 502
              L   Q+ Q+ H  QQ   Q      +Q QPQ                          
Sbjct: 479 SAALMQPQMVQESH-SQQAFLQGVQENHRQSQPQAQTQSHLLQQQLQHQNSFSNQQQQQL 537

Query: 503 ---QHM----------------YHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEIS 543
              QH+                   +LQ+ T   L  QQ      SFS +N    +   S
Sbjct: 538 VDHQHIPSAVSSLTQFASASQSQSPSLQVVTT--LCHQQ------SFSDSN---GNPATS 586

Query: 544 VSISPMQNMLGSLPEG-SGNLLNF--------SGAGPSMLRQQFPQQSLG---------S 585
             ISP+ N++GS P+  S +LLN         S   PS      P  S G          
Sbjct: 587 TVISPLHNLMGSFPQDESSHLLNLPRTNQLISSDGWPSKRAAIDPLLSSGVSQCVLPRVE 646

Query: 586 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 645
           ++ P       +S+SLP  + G++ ++  E   TD Q+ ++FGV+I+SS L++ + +S+ 
Sbjct: 647 QFGPPHTTMSQNSISLP-PFPGRECSLDQEG-GTDPQSHLLFGVNIESSPLIMQSGMSNL 704

Query: 646 T-TSVDPGVSSMP-----LGDSGFHNSM------YGCMQDSSELLHNVGQIDQLTP-TRT 692
                D G ++M      +  +G   S+        C+ +S   L +    D   P  R 
Sbjct: 705 RGVGSDCGSTTMHFPSNYMSTAGSDFSINPAVTPSSCIHESG-FLQSSENADNGDPLNRN 763

Query: 693 FVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
           FVKVYKSGS GRSLDI++FSSY ELR EL +MFG+EGK +DP+RSGWQLVFVDRENDVLL
Sbjct: 764 FVKVYKSGSFGRSLDITKFSSYQELRNELARMFGLEGKLDDPVRSGWQLVFVDRENDVLL 823

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSP------------SSGQRANSRG- 799
           LGDDPW  FV++VW IKILSP++VQ+MG++G+E                  G R +SR  
Sbjct: 824 LGDDPWPEFVNSVWCIKILSPQEVQQMGKRGLELLKSVPNQRLSNNSCDDYGSRQDSRNL 883

Query: 800 NCGRDPVGSLEY 811
           + G   VGSLEY
Sbjct: 884 SSGITSVGSLEY 895


>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 897

 Score =  902 bits (2330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/904 (56%), Positives = 610/904 (67%), Gaps = 100/904 (11%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS++       EG+ + L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TNKE
Sbjct: 1   MRLSSADFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+LPPQLICQLHN+TMHADVETDEVYAQMTLQPL+P+EQ + ++P ELG  S
Sbjct: 61  VDAHIPNYPSLPPQLICQLHNMTMHADVETDEVYAQMTLQPLNPQEQNEAYLPAELGTAS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLH  EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGI DLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGIGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLG 416
           TFPMYPS FPLRLKRPW P   SF+  +D+   GLN    WLR    ++GL +LNFQ +G
Sbjct: 361 TFPMYPSSFPLRLKRPWPPGLPSFHGMKDDDF-GLNSPLLWLR--DTDRGLQSLNFQGIG 417

Query: 417 MFPWMQQRVEPSFLG--NDHNQQYQAMLAAGMQSGDPVRQ---QFMQLQQPFQYLQQSGS 471
           + PWMQ R +P+ L    D  Q   A     M+S DP +Q     +Q QQP  +  ++ +
Sbjct: 418 VNPWMQPRFDPTVLNMQTDMYQAAAAAAVQDMRSLDPSKQLSASLLQFQQPQNFPNRTAA 477

Query: 472 QNPLQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYH------------------------ 507
               Q+ Q+    Q   +  E++   Q QPQ   +                         
Sbjct: 478 LMQAQMLQKSQPQQIFGNNQENQHSPQSQPQTQAHLQQHLQHQHSFNSQHHHHQQQQQQQ 537

Query: 508 ---DALQIRTDELLQRQQSNLPSP--------SFSKANFMDSS-TEISVSISPMQNMLGS 555
              D  QI +      Q  + P P        S    NF +S+   ++  +SP+ ++LGS
Sbjct: 538 QVVDNQQISSAVSTMSQLFSAPQPQSPPMQAISSLCQNFSNSNGNSVTTIVSPLHSILGS 597

Query: 556 LPEG-SGNLLNF-----------SGAGPSMLRQQFPQQSLGSKY----------EPSQVR 593
            P+  + +LLN            S   PS      P  S G+ +          +P    
Sbjct: 598 FPQDETSHLLNLPRTSSWIPIQNSSGWPSKRVAVDPLLSSGASHCVLPQVDQLGQPHSTM 657

Query: 594 DFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFT-TSVDPG 652
             +++++LP  + G+++++  E  N D QN ++FGV+ID S LL+P  +SS    S +  
Sbjct: 658 S-LNAITLP-PFPGRESSIDQEGSN-DPQNHLLFGVNIDPSSLLMPNGMSSLKGVSGNNN 714

Query: 653 VSSMPLGDSGFHNSMYGCMQD----------SSELLHNVGQIDQLTP-TRTFVKVYKSGS 701
            S++P   S + N+  G               S  LH      Q  P  +TFVKVYKSGS
Sbjct: 715 SSTLPYQSSNYLNTTTGTDSSLNHGMTPNIGDSGFLHCPEDAGQGNPLNKTFVKVYKSGS 774

Query: 702 VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 761
            GRSLDI++FSSY+ELR EL +MFG+EG+ EDP+RSGWQLVFVDRENDVLLLGD PW  F
Sbjct: 775 FGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEF 834

Query: 762 VSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG-----RDP---------VG 807
           V++VW IKILSP++VQ+MG  G+E  +    QR  S G C      +DP         VG
Sbjct: 835 VNSVWCIKILSPQEVQQMGNNGLELLNSVPNQRL-SNGICDDYVSRQDPRNLSTGITTVG 893

Query: 808 SLEY 811
           SL+Y
Sbjct: 894 SLDY 897


>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 895

 Score =  899 bits (2322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/904 (57%), Positives = 610/904 (67%), Gaps = 102/904 (11%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS++G      EG+N+ L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TNKE
Sbjct: 1   MRLSSAGFSPPPQEGENRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+LPPQLICQLHN+TMHAD ETDEVYAQMTLQPL+P+EQK+ ++P ELG PS
Sbjct: 61  VDAHIPNYPSLPPQLICQLHNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLH  EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAG+RQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDET---ASGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS FPLRLKRPW P   SF+  +D+     S L WLR    ++GL +LNFQ +G+
Sbjct: 361 TFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGPNSPLLWLR--DPDRGLPSLNFQGIGI 418

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQNPLQL 477
            PWMQ R +P+ L N     YQA     M+S DP +Q    L  PFQ  Q   ++    +
Sbjct: 419 NPWMQPRFDPTML-NMQTDMYQAAAVQDMRSLDPSKQHSASL-LPFQQPQNFPNRTAALM 476

Query: 478 KQQQHLLQQLNSQAEDRAQQQQQPQQHMYH------------------------------ 507
           + Q     Q      +  + Q  PQ   +                               
Sbjct: 477 QAQMLQQSQPQQIFGNTQENQHSPQSQAHLQQHLQHQHSFNSQHHHHHQQQQQRQQHQVV 536

Query: 508 DALQIRTDELLQRQQSNLPSPS----------FSKANFMDSS-TEISVSISPMQNMLGSL 556
           D  QI +      Q  + P P             + NF DS+   ++  +SP+ ++LGS 
Sbjct: 537 DNQQISSAVSTMSQFVSAPQPQSPPMQVISSMCQQQNFSDSNGNTVTTIVSPLHSILGSF 596

Query: 557 PEG-SGNLLNF-----------SGAGPSMLRQQFPQQSLG-SKYEPSQVRDF-------- 595
           P+  + +LLN            S   PS      P  S G S+    QV           
Sbjct: 597 PQDETSHLLNLPRTSSWIPVQNSSGWPSKRVAVDPLLSSGASQCVLPQVEQLGQPQSTMS 656

Query: 596 VHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVS 654
            +++SLP  + G++ ++  E  N D QN ++FGV+I+ S LL+P  +SS      + G S
Sbjct: 657 QNAISLP-PFPGRECSIDQEGSN-DPQNHLLFGVNIEPSSLLMPNGMSSLKGVCGNNGSS 714

Query: 655 SMPL-----------GDSGFHNSMYGCMQDSS--ELLHNVGQIDQLTPTRTFVKVYKSGS 701
           ++P             DS  ++ M   + DS   + L   GQ + L   +TFVKVYKSGS
Sbjct: 715 TLPYQSSNYLNTTTRTDSSLNHGMTPNIGDSGFLQCLEEAGQGNPL--NKTFVKVYKSGS 772

Query: 702 VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 761
            GRSLDI++FSSY+ELR EL +MFG+EG+ EDP+RSGWQLVFVDRENDVLLLGD PW  F
Sbjct: 773 FGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEF 832

Query: 762 VSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG-----RDP---------VG 807
           V++VW IKILSP++VQ+MG  G+E  +    QR  S G C      +DP         VG
Sbjct: 833 VNSVWCIKILSPQEVQQMGNNGLELLNSFPIQRL-SNGICDDYVSRQDPRNLGTGITTVG 891

Query: 808 SLEY 811
           SL+Y
Sbjct: 892 SLDY 895


>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 899

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/876 (57%), Positives = 593/876 (67%), Gaps = 89/876 (10%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS  G   Q  EG+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+E
Sbjct: 1   MRLSAGGFSPQAPEGERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+ IPNYP+LPPQLICQLHN+TMHAD ETDEVYAQMTLQPLS +E K+ ++P ELG PS
Sbjct: 61  VDAQIPNYPSLPPQLICQLHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS+QPPAQELIARDLHD EWKFR
Sbjct: 121 RQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGD+VLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAAT S FT+FFNPRASPSEFVIPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSF--NDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMF 418
           TFPMYPS FPLRLKRPW     SF   D+     S   WLRG   ++G+  LNFQ  G+ 
Sbjct: 361 TFPMYPSPFPLRLKRPWPTGLPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVS 420

Query: 419 PWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVR------QQFMQLQQPF--------- 463
           PWMQ R++PS +G   +  YQ M  A +Q    +          +Q QQP          
Sbjct: 421 PWMQPRLDPSMMGM-QSDMYQVMATAALQEMRAIDYSKISPASVLQFQQPQSLPCQSSTL 479

Query: 464 ---QYLQQSGSQNP-LQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYH------------ 507
              Q L QS  Q   LQ  Q+     Q  SQ +    Q Q PQQ   +            
Sbjct: 480 MQPQMLHQSQPQQAFLQSVQENQQHSQPQSQTQSHHLQPQLPQQSFNNHSQQHQQQPRQT 539

Query: 508 ---DALQIRT-----DELLQRQQSNLPS----------PSFSKANFMDSSTEISVSISPM 549
              D  QI +      +     QS  PS          PSFS +N    +   S ++SP+
Sbjct: 540 QPLDHQQIPSSIPAISQFASCSQSQSPSLQTVPSLCQQPSFSDSN---GNPATSPTVSPL 596

Query: 550 QNMLGS-LPEGSGNLLNF--------SGAGPSMLRQQFPQQSLGSKYEPSQVRDF----- 595
            ++ GS + + S  LLN         S   PS      P  +  S+Y   QV        
Sbjct: 597 HSLAGSFVQDDSSQLLNLQRAHSVIPSAGWPSKRAAIDPLCTGASQYFLPQVEMLGTQQS 656

Query: 596 ---VHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPG 652
               ++++LP  + G++  +     ++D QN V+FGV+IDSS LL+   +S+     +  
Sbjct: 657 SISQNTVALP-PFPGRECPIDDREESSDPQNHVLFGVNIDSSSLLMQNGMSTLRGVCNDS 715

Query: 653 VSSMPLGDSGFHNSM------------YGCMQDSSELL--HNVGQIDQLTPTRTFVKVYK 698
           VS+     S + ++               C+ +S  L    NVGQ++   P  TFVKV+K
Sbjct: 716 VSTTLPFSSNYMSTAGTNFPVNPTMTSSNCIDESGLLQSHENVGQVN--PPNGTFVKVHK 773

Query: 699 SGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 758
           SG+  RSLDI++F+SY ELR EL +MFG+EG+ EDPLRSGWQLVFVDRENDVLLLGD PW
Sbjct: 774 SGTYSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPW 833

Query: 759 EAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 794
             FV++VW IKILSPE+VQ MG++G+E  +    QR
Sbjct: 834 PEFVNSVWCIKILSPEEVQDMGKRGLELLNSVPIQR 869


>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 896

 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/857 (60%), Positives = 592/857 (69%), Gaps = 81/857 (9%)

Query: 1   MKLSTSGLCQQGHE-GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           MKLS+SG      E G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+
Sbjct: 1   MKLSSSGFNPPAEEEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNR 60

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGI 118
           EVD+HIPNYPNLPPQLICQLHNVTMHAD ETDEVYAQMTLQPLSP+EQK+ ++ P ELG 
Sbjct: 61  EVDAHIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGT 120

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD+S QPPAQELIARDLHD EWK
Sbjct: 121 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWK 180

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP T+MPSS
Sbjct: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSS 240

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           VLSSDSMHIGLLAAAAHAAATNS FT+F+NPRASPSEF IPL KYVKAV+HTRVSVGMRF
Sbjct: 241 VLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFAIPLAKYVKAVYHTRVSVGMRF 300

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RMLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 301 RMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 360

Query: 359 LTTFPMYPSLFPLRLKRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
           LTTFPMYPS FPLRLKRPW    PS     D      S   WL+GG G+QG+ +LNFQ L
Sbjct: 361 LTTFPMYPSPFPLRLKRPWPSGLPSLYGLKDGDMGIGSPFMWLQGGLGDQGMQSLNFQGL 420

Query: 416 GMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPV-----RQQFMQLQQ----PFQYL 466
           G+ PWMQ R++PS  G    + YQA+ ++  Q    +      Q  +Q QQ    P  + 
Sbjct: 421 GVTPWMQPRLDPSIPG-LQPELYQAITSSAFQEMRTMDLSKSSQSLLQFQQTSNVPSAHA 479

Query: 467 QQSGSQNPLQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYH------DALQIRTDELLQR 520
            +   Q   Q + Q  LL            Q  Q Q H YH         Q   +  +Q+
Sbjct: 480 SEVQRQLLPQSQLQNTLLHNFQENQVPAQSQLLQQQLHRYHPYSDQQQQQQQLKNLPVQQ 539

Query: 521 QQSNLPSPSFSKANFMDSST---------------------EISVS-ISPMQNMLGSLP- 557
           Q  N+ SP    A+   S +                      IS S +SP+Q++LGS   
Sbjct: 540 QLPNVISPMSKFASGTQSQSPPMQALASHCQQQSFPEPMRNHISGSDVSPIQSLLGSFSQ 599

Query: 558 EGSGNLLNFSGAG---------PSMLRQQFPQ-QSLGSKYEPSQVRDFVHSMSLPSSYNG 607
           +G+  LLN SG+          P  +  + PQ  S  S+    QV +   S S  S    
Sbjct: 600 DGTSQLLNLSGSNSVMSSAAILPKQITAEPPQLPSAASQCILPQVENLGTSQSNVSELAA 659

Query: 608 KDAAVGTENC----NTDSQNSVVFGVHIDSSGLLLPTTVSS--------------FTTSV 649
                G E+       D Q++++FG++ID S L+L + +S+              F+TS 
Sbjct: 660 LPPFPGREHSAYHGAADPQSNLLFGINIDPSSLMLQSGMSNLRNIGKVNDSLSLPFSTSN 719

Query: 650 DPGV--SSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVYKSGSVGRSL 706
             G   +  PL  +   +S   C+ D S  L     +DQ   PT TFVKV+KSGS GRSL
Sbjct: 720 CGGATGTDFPLSSNMTTSS---CV-DESGFLQCSENVDQANIPTGTFVKVHKSGSFGRSL 775

Query: 707 DISRFSSYNELREELGQMFGIEGKFEDPL--RSGWQLVFVDRENDVLLLGDDPWEAFVSN 764
           DIS+FSSY+EL  EL +MFG+EG+ EDP   RSGWQLVFVDRENDVLLLGDDPW+ FV+N
Sbjct: 776 DISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDVLLLGDDPWQEFVNN 835

Query: 765 VWYIKILSPEDVQKMGE 781
           VWYIKILSP +VQ+MG+
Sbjct: 836 VWYIKILSPLEVQQMGK 852


>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
 gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
          Length = 914

 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/893 (56%), Positives = 607/893 (67%), Gaps = 98/893 (10%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+ S++    Q  EG+ + LNSELWHACAGPLVSLP VG+RVVYF QGHSEQVAA+TNKE
Sbjct: 1   MRHSSASFNPQTQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+ IPNYP+LPPQLICQLHNVTMHADVETDEVYAQ+TLQPLSP+EQKD ++P +LG PS
Sbjct: 61  VDARIPNYPSLPPQLICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRL+AGDSVLFIWNEKNQLLLGI+RA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIKRATRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEF+IPL KY+KAV++TRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYLKAVYYTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD  RW NS WRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDVARWPNSLWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFN----------------DNRDETASGLNWLRGGTGE 404
           TFPMYPS FPLRLKRPW P   SF+                D+     S L WLRG  G+
Sbjct: 361 TFPMYPSTFPLRLKRPWTPGLHSFHGKLLYTILRALMDGIKDDDLGMNSSLMWLRGD-GD 419

Query: 405 QGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAG---MQSGDPVRQQFMQLQQ 461
           +G+ +LN Q +G+ PWMQ RV+ S LG   N  YQ M  A    M++ DP +     L Q
Sbjct: 420 RGIQSLNLQGMGVAPWMQPRVDTSMLGL-QNDVYQTMATAAFQEMRALDPSKSSAASLLQ 478

Query: 462 PFQY----LQQSGSQNPLQLKQ---QQHLLQQLNSQAEDRAQQQQQP-QQHMYH------ 507
             Q+    ++ +    PL L+Q   QQ  LQ +         Q Q P + H+ H      
Sbjct: 479 FQQHQNLPIRNAALMQPLMLQQSPSQQAFLQGVQENKHQSQPQSQTPTRSHLIHQLQHQH 538

Query: 508 --DALQIRTDELLQRQQSNLPSPSFSKA------------------------NFMDSSTE 541
             D+ + +   L Q+  ++   P+   A                        +F DS+  
Sbjct: 539 SLDSPEQQQPLLQQQHLADQQIPNVVSAISQYASATQSLTPPLQAISLCQQHSFSDSNGN 598

Query: 542 ISVS--ISPMQNMLGSLPEG-SGNLLNFSGAGPSMLRQQFPQQS-----LGSKYEPSQVR 593
           +  S  +SP+Q++LGS P+  + +L NF    P      +P +      L S   P  + 
Sbjct: 599 LVTSPVVSPLQSLLGSFPQDETSHLFNFPRTNPLTTSSGWPSKRAAVDPLISSVAPQCMM 658

Query: 594 DFVHSMSLPSS-----------YNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTV 642
             V  +  P +           + G++     ++  TD Q+ ++FGV I+ S LL+   +
Sbjct: 659 SQVEQLGPPQTSISPSSVSLLPFPGRECPT-EQDGGTDPQSHLLFGVSIEPSSLLMQNGL 717

Query: 643 SSF--------TTSVDPGVSSMPLGDSGFH----NSMYGCMQDSSEL--LHNVGQIDQLT 688
           SS         +T+V    + M +  + F      +   C+ +S  L  + NVGQ +   
Sbjct: 718 SSLRGVGSDSDSTTVPFSSNYMSIAGTNFSLNPAMAPSSCIDESGFLQSMENVGQGN--P 775

Query: 689 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           P+RTFVKVYKSGS GRSLDI++FS+YNELR EL  MFG+EG+ EDPLRSGWQLVF+DREN
Sbjct: 776 PSRTFVKVYKSGSFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDREN 835

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC 801
           DVLLLGD PW  FV++VW IKILSP++VQ+MG++G+E  +    QR  S G+C
Sbjct: 836 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGKRGLELLNSVPIQRL-SNGSC 887


>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 866

 Score =  894 bits (2310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/853 (59%), Positives = 590/853 (69%), Gaps = 73/853 (8%)

Query: 1   MKLSTSGLCQQGHE-GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           MKLS+SG      E G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+
Sbjct: 1   MKLSSSGFNPPAEEEGEKKCLNSELWHACAGPLVSLPLVGSRVVYFPQGHSEQVAASTNR 60

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGI 118
           EVD+HIPNYPNLPPQLICQLHNVTMHAD ETDEVYAQMTLQPLSP+EQK+ ++ P ELG 
Sbjct: 61  EVDAHIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGT 120

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           P KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD+S QPPAQELIARDLHD EWK
Sbjct: 121 PGKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWK 180

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP T+MPSS
Sbjct: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSS 240

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           VLSSDSMHIGLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRF
Sbjct: 241 VLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRF 300

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RMLFETEESSV RYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 301 RMLFETEESSVPRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 360

Query: 359 LTTFPMYPSLFPLRLKRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
           LTTFPMYPS FPLRL+RPW    PS     D      S   WL+GG G+QG+ +LNFQ L
Sbjct: 361 LTTFPMYPSPFPLRLRRPWPSGLPSLYGLKDGDMGIGSPFMWLQGGLGDQGMQSLNFQGL 420

Query: 416 GMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVR--QQFMQLQQPF------- 463
           G+ PWMQ R++ S  G    + YQAM ++  Q   + DP +  Q  +Q QQ         
Sbjct: 421 GVTPWMQPRLDASIPG-LQPELYQAMASSAFQEIRTMDPSKSSQSLLQFQQTSNVPSAHA 479

Query: 464 -----QYLQQSGSQNPLQLKQQQHLL-----------QQLNSQAEDRAQQQQ---QPQQH 504
                Q L QS  QN L    Q++ +            + +  ++ R QQQQ    P Q 
Sbjct: 480 SEVQRQVLPQSQPQNTLLHNYQENQVPAQSQLLQQQLHRYHPYSDPRQQQQQLKNLPVQQ 539

Query: 505 MYHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEI------SVSISPMQNMLGSLP- 557
              + +   ++     Q  + P  + +      S  E+         +S + ++LGS   
Sbjct: 540 QLPNVISPLSNFASGTQSQSPPIQALASHCQQQSFPELMRNHISGSDVSSIHSLLGSFSQ 599

Query: 558 EGSGNLLNFSGAG---------PSMLRQQFPQ-QSLGSKYEPSQVRDFVHSMSLPSSYNG 607
           +G+  LLN SG+          P  +  + PQ  S   +    QV +   S S  S    
Sbjct: 600 DGTSQLLNLSGSNSVMSSAAMLPKQITTEPPQLPSAAPQCVLPQVENLGTSQSNVSELAA 659

Query: 608 KDAAVGTE----NCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVS-SMPL---- 658
                G E    +   D Q++++FG++ID S L+L   +S+     +   S S+P     
Sbjct: 660 LPPFAGREHSAYHAAADPQSNLLFGINIDPSSLMLQNGMSNLRNIGNVNNSLSLPFSASN 719

Query: 659 --GDSGFHNSMYGCMQ-----DSSELLHNVGQIDQL-TPTRTFVKVYKSGSVGRSLDISR 710
             G SG    +   M      D S  L +   +DQ  TPT TFVKV+KSGS GRSLDIS+
Sbjct: 720 CGGASGTDFPLSSNMTTSSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISK 779

Query: 711 FSSYNELREELGQMFGIEGKFEDPL--RSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 768
           FSSY+EL  EL +MFG+EG+ EDP   RSGWQLVFVDRENDVLLLGDDPW+ FV+NVWYI
Sbjct: 780 FSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYI 839

Query: 769 KILSPEDVQKMGE 781
           KILSP +VQ+MG+
Sbjct: 840 KILSPLEVQQMGK 852


>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 786

 Score =  892 bits (2306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/772 (64%), Positives = 574/772 (74%), Gaps = 39/772 (5%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQLIC
Sbjct: 24  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLIC 83

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 84  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 143

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 144 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWS 203

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIR A RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 204 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAA 263

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASP+EFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 264 ATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 323

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 324 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 383

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   ++ +D+    ++ L WLRG TGE G  +LNFQS G+  W QQR+ PS L NDH+Q 
Sbjct: 384 YSGLAALHDD----SNALMWLRGVTGEGGFHSLNFQSPGIGSWGQQRLHPSLLSNDHDQY 439

Query: 438 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP--------------LQLKQQQH 482
              + AA        ++QQF+ LQQP Q  Q+  + NP              +     Q+
Sbjct: 440 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEQCNLNPLLQQQILQQASQQQMVSSDAQN 499

Query: 483 LLQQLNSQAEDRAQQQQQPQQHMYHDALQ-IRTDELLQRQQSN-LPSPSF------SKAN 534
           +   LN  A  +   Q Q  QH ++D  Q I+ D+  Q   S  LPSP+        K  
Sbjct: 500 IQSVLNPGAIQQQLHQLQQMQHTHNDQKQKIQPDQQYQVASSAVLPSPTSLPSHLREKFG 559

Query: 535 FMD--SSTEISVSISPMQNMLGS----LPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYE 588
           F D   ++   +S S  +NML S    +   S +L  F+    S  +Q   QQ+   K+ 
Sbjct: 560 FSDPNVNSSSFISSSSNENMLESNFLQVSSKSVDLSRFNQPVVSEQQQPQQQQAWKQKFM 619

Query: 589 PSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTS 648
            SQ   F  S+SL +S   KD +V  +    D QN  +F   +DSS LL    V + T++
Sbjct: 620 GSQSMSFGGSVSL-NSPTSKDGSVDNK-VGRDVQNQSLFSPQVDSSSLLY-NMVPNLTSN 676

Query: 649 V-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLD 707
           V D  +S+ P G +   + MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLD
Sbjct: 677 VADNNISAFPSGSTYLQSPMYGCLDDSSGLLQNTGENDPT--TRTFVKVYKSGSVGRSLD 734

Query: 708 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 759
           I+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE
Sbjct: 735 ITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWE 786


>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/480 (90%), Positives = 457/480 (95%), Gaps = 5/480 (1%)

Query: 1   MKLSTSGLCQQ-GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           MKLSTSGL QQ GHEG+ KCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGLGQQQGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNK 60

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP 119
           EVD HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIP 120

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 180 RHIFRG-QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           RHIFRG QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSS
Sbjct: 181 RHIFRGRQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSS 240

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           VLSSDSMHIGLLAAAAHAAATNSCFT+F+NPRASPSEFVIPL+KYVKAVFHTRVSVGMRF
Sbjct: 241 VLSSDSMHIGLLAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRF 300

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RMLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 301 RMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 360

Query: 359 LTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMF 418
           LTTFPMYPSLFPLRLKRPWHP  SS +D+RDE A+GL WLRG TG+QGL +LNFQ++GMF
Sbjct: 361 LTTFPMYPSLFPLRLKRPWHPGASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQTVGMF 420

Query: 419 PWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL 475
           PW QQR++P+FLGNDHNQQYQAMLAAG+Q   SGDP++QQ+MQ QQPFQYLQQ+GS NPL
Sbjct: 421 PWTQQRLDPTFLGNDHNQQYQAMLAAGLQNLGSGDPLKQQYMQFQQPFQYLQQTGSNNPL 480


>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 902

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/924 (56%), Positives = 616/924 (66%), Gaps = 135/924 (14%)

Query: 1   MKLSTSGLCQ--QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN 58
           M+LST+G  +      G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN
Sbjct: 1   MRLSTAGFSELVSKFSGERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTN 60

Query: 59  KEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI 118
           +EVD+HIP+YP+LPPQLICQLHNVTMHAD+ETDEVYAQMTLQPL+ +EQK+ ++P ELG 
Sbjct: 61  REVDAHIPSYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGA 120

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWK
Sbjct: 121 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWK 180

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FIWNEKNQLLLGIRRA RP TVMPSS
Sbjct: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSS 240

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           VLSSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEF+IPL KYVKAV+HTRVSVGMRF
Sbjct: 241 VLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRF 300

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RMLFETEESSVRRYMGTITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 301 RMLFETEESSVRRYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 360

Query: 359 LTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETA---SGLNWLRGGTGEQGLTTLNFQSL 415
           LTTFPMYPS FPLRLKRPW     SF+  +++     S L WLRG   ++G+  LNF  +
Sbjct: 361 LTTFPMYPSPFPLRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGI 420

Query: 416 GMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQ 472
           G+ PWMQ R++ S +G    + YQAM AA +Q   + DP + Q   L Q FQ  Q   ++
Sbjct: 421 GVAPWMQPRLDASMVG-LQPEIYQAMAAAALQEMRTVDPAKAQAASLLQ-FQQTQNLPNR 478

Query: 473 NP---------------------LQLKQQQHLLQ-QLNSQAEDRAQQQ--------QQPQ 502
                                  LQ  + QHL   Q  SQ     QQ+         QPQ
Sbjct: 479 PANFMPPQMLQQPQPQPQPPQTFLQGDENQHLSHSQAQSQPTAVLQQEIKHQTFNNHQPQ 538

Query: 503 QHMYHDALQI---------------------RTDELLQRQQSNLPSPSFSKANFMDSSTE 541
           Q ++ D  QI                     +T   L RQQ      SFS +N    ++ 
Sbjct: 539 QQVF-DHHQIPSPMSTMSQFSSASQSQAQSLQTIPPLCRQQ------SFSDSNPNHVTSP 591

Query: 542 ISVSISPMQNMLGS--LPEGSGNLLNFSGAGPSMLRQQFPQQ---------SLGSKYEPS 590
           I   ISP+ ++LG     + S  +LN     P +    +P +         S  S++  S
Sbjct: 592 I---ISPLHSLLGGSFSQDESSQMLNLPRTNPMIHSSTWPSKRAAIDPLLSSGNSQFVLS 648

Query: 591 QVRDF--------VHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTV 642
           Q  +          ++ SLP  + G++ ++  +  N D Q++++FGV+I+ S LL+   +
Sbjct: 649 QGENIGTTPANISQNAFSLP-PFPGRECSL--DQGNVDPQSNLLFGVNIEPSSLLMQNGM 705

Query: 643 ------------------SSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELL--HNVG 682
                             S++  +     S+ P G     N    C +DS  L    N G
Sbjct: 706 PNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSN----CNEDSGFLQSPENTG 761

Query: 683 QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 742
           Q++   PTRTFVKVYKSGS GRSLDIS+FSSY++LR EL  MFG+EG+ EDPLRSGWQLV
Sbjct: 762 QVN--PPTRTFVKVYKSGSFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQLV 819

Query: 743 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC- 801
           FVDRENDVLLLGDDPW  FV++VW IKILSP++VQ MG++G+E  +    QR  S G+C 
Sbjct: 820 FVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDMGKRGLELLNSVPIQRL-SNGSCD 878

Query: 802 --------------GRDPVGSLEY 811
                         G   VGSLEY
Sbjct: 879 NYANRQESSRNMNSGITSVGSLEY 902


>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
           partial [Cucumis sativus]
          Length = 884

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/862 (58%), Positives = 585/862 (67%), Gaps = 91/862 (10%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+EVD+ IPNYP+LPPQL
Sbjct: 1   ERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQL 60

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHN+TMHAD ETDEVYAQMTLQPLS +E K+ ++P ELG PS+QPTNYFCKTLTASD
Sbjct: 61  ICQLHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASD 120

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDFS+QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTTG
Sbjct: 121 TSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 180

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGD+VLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAAH
Sbjct: 181 WSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAH 240

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AAAT S FT+FFNPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFET ESSVRRYMGT
Sbjct: 241 AAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETXESSVRRYMGT 300

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 301 ITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 360

Query: 376 PWHPSTSSF--NDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGND 433
           PW     SF   D+     S   WLRG   ++G+  LNFQ  G+ PWMQ R++PS +G  
Sbjct: 361 PWPTGLPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVSPWMQPRLDPSMMGM- 419

Query: 434 HNQQYQAMLAAGMQSGDPVR------QQFMQLQQPF------------QYLQQSGSQNP- 474
            +  YQ M  A +Q    +          +Q QQP             Q L QS  Q   
Sbjct: 420 QSDMYQVMATAALQEMRAIDYSKISPASVLQFQQPQSLPCQSSTLMQPQMLHQSQPQQAF 479

Query: 475 LQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYH---------------DALQIRT----- 514
           LQ  Q+     Q  SQ +    Q Q PQQ   +               D  QI +     
Sbjct: 480 LQSVQENQQHSQPQSQTQSHHLQPQLPQQSFNNHSQQHQQQPRQTQPLDHQQIPSSIPAI 539

Query: 515 DELLQRQQSNLPS----------PSFSKANFMDSSTEISVSISPMQNMLGS-LPEGSGNL 563
            +     QS  PS          PSFS +N    +   S ++SP+ ++ GS + + S  L
Sbjct: 540 SQFASCSQSQSPSLQTVPSLCQQPSFSDSN---GNPATSPTVSPLHSLAGSFVQDDSSQL 596

Query: 564 LNF--------SGAGPSMLRQQFPQQSLGSKYEPSQVRDF--------VHSMSLPSSYNG 607
           LN         S   PS      P  +  S+Y   QV            ++++LP  + G
Sbjct: 597 LNLQRAHSVIPSAGWPSKRAAIDPLCTGASQYFLPQVEMLGTQQSSISQNTVALP-PFPG 655

Query: 608 KDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM 667
           ++  +     ++D QN V+FGV+IDSS LL+   +S+     +  VS+     S + ++ 
Sbjct: 656 RECPIDDREESSDPQNHVLFGVNIDSSSLLMQNGMSTLRGVCNDSVSTTLPFSSNYMSTA 715

Query: 668 ------------YGCMQDSSELLH---NVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFS 712
                         C+ D S LL    NVGQ++   P  TFVKV+KSG+  RSLDI++F+
Sbjct: 716 GTNFPVNPTMTSSNCI-DESGLLQSHENVGQVN--PPNGTFVKVHKSGTYSRSLDITKFN 772

Query: 713 SYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILS 772
           SY ELR EL +MFG+EG+ EDPLRSGWQLVFVDRENDVLLLGD PW  FV++VW IKILS
Sbjct: 773 SYPELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILS 832

Query: 773 PEDVQKMGEQGVESFSPSSGQR 794
           PE+VQ MG++G+E  +    QR
Sbjct: 833 PEEVQDMGKRGLELLNSVPIQR 854


>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
 gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
          Length = 908

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/930 (55%), Positives = 615/930 (66%), Gaps = 141/930 (15%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS++       EG+ + L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TNKE
Sbjct: 1   MRLSSASFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+LPPQLICQLHN+TMHADVETDEVYAQMTLQPL+ +EQK+ ++P ELG PS
Sbjct: 61  VDAHIPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLH  EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRA PSEFVIPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGI DLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS FPLRLKRPW P   SF+  +D+    +S L WLR    ++GL +LN+Q +G+
Sbjct: 361 TFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGMSSPLMWLRD--TDRGLQSLNYQGIGV 418

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSG----DPVRQ---QFMQLQQPFQY----- 465
            PWMQ R +P+ L N     YQA+ AA +Q      DP +Q     +Q QQP  +     
Sbjct: 419 NPWMQPRFDPAML-NMQTDMYQAVAAAALQDMRTVVDPSKQLPGSLLQFQQPPNFPNRTA 477

Query: 466 --LQQSGSQNPLQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYH---------------- 507
             +Q    Q     +  Q+  Q+  + ++ + Q Q  PQQH  H                
Sbjct: 478 ALMQAQMLQQSQPQQAFQNNNQENQNLSQSQPQAQTNPQQHPQHQHSFNNQLHHHSQQQQ 537

Query: 508 ------------------------DALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEIS 543
                                    A Q ++   +Q   S     SFS +N ++SST I 
Sbjct: 538 QTQQQVVDNNQQISGSVSTMSQFVSATQPQSPPPMQALSSLCHQQSFSDSN-VNSSTTI- 595

Query: 544 VSISPMQNMLG-SLPEGSGNLL-------------NFSG------AGPSMLRQQFPQQSL 583
             +SP+ +++G S P    +LL             N +G      A   +L     Q  L
Sbjct: 596 --VSPLHSIMGSSFPHDESSLLMSLPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCIL 653

Query: 584 GSKYEPSQVRDFV--HSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 641
               +  Q R+ +  ++++LP  + G++ ++  E  N D Q++++FGV+ID S LLL   
Sbjct: 654 PQVEQLGQARNSMSQNAITLP-PFPGRECSIDQEGSN-DPQSNLLFGVNIDPSSLLLHNG 711

Query: 642 VSSFT---------------------------TSVDPGVSSMPLGDSGFHNSMYGCMQDS 674
           +S+F                            +S++ GV+   +G+SGF ++     Q +
Sbjct: 712 MSNFKGISGNNNDSSTMSYHQSSSYMNTAGADSSLNHGVTPS-IGESGFLHTQENGEQGN 770

Query: 675 SELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDP 734
           + L             +TFVKVYKSGS GRSLDI++FSSYNELR EL +MFG+EG+ EDP
Sbjct: 771 NPL------------NKTFVKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDP 818

Query: 735 LRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV---------- 784
           +RSGWQLVFVDRENDVLLLGD PW  FV++VW IKILSPE+VQ+MG  G+          
Sbjct: 819 VRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQQMGNTGLGLLNSVPIQR 878

Query: 785 --ESFSPSSGQRANSRG-NCGRDPVGSLEY 811
              S       R +SR  + G   VGSL+Y
Sbjct: 879 LSNSICDDYVSRQDSRNLSSGITTVGSLDY 908


>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
          Length = 795

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/797 (60%), Positives = 556/797 (69%), Gaps = 53/797 (6%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ KCLNSELWHACAGPLV LP + +RVVYFPQGHSEQVAA+TN+EV  H+PNYP LPPQ
Sbjct: 5   GEKKCLNSELWHACAGPLVCLPAISSRVVYFPQGHSEQVAASTNREVTDHVPNYPGLPPQ 64

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           LICQLH+VTMHAD ETDEVYAQMTLQPLSP+EQKD F+P ELGIP+ QPTNYFCKTLTAS
Sbjct: 65  LICQLHDVTMHADAETDEVYAQMTLQPLSPQEQKDAFLPAELGIPTNQPTNYFCKTLTAS 124

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAEKVFP LDFS QPP+QELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 125 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKRHLLTT 184

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVSAKRLV GDSV+FIWNEKNQLLLGIRRA RP TVMP SVLSSDSMHIGLLAAAA
Sbjct: 185 GWSVFVSAKRLVTGDSVIFIWNEKNQLLLGIRRAARPQTVMPYSVLSSDSMHIGLLAAAA 244

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAATNS FTVF+NPRASPSEFVI L KY+KAVF TRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 245 HAAATNSRFTVFYNPRASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESSVRRYMG 304

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TIT ISDLDPVRW+NSHWRSVKVGWDESTAG RQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 305 TITSISDLDPVRWANSHWRSVKVGWDESTAGIRQPRVSLWEIEPLTTFPMYPSLFPLRLK 364

Query: 375 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           RPW P  S  +          N  +            ++ +G+  W QQRV+ S LG + 
Sbjct: 365 RPWLPEMSPLHSTYHRDYYNGNAFQA-----------YRDVGLNSWSQQRVDLSQLGTEQ 413

Query: 435 NQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQNPL---QLKQQQHLLQQ----- 486
           + Q+Q+  +    S DP +Q  +  Q   Q  Q     N +   ++ QQ   +Q+     
Sbjct: 414 D-QFQSAASTSWSSEDPTKQCLLGFQNSLQSTQFPSRFNLVTHSEIIQQTQPVQRQLSLP 472

Query: 487 ----LNSQAEDRAQ---------QQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSKA 533
               L+ Q  D+             QQP Q+  + + Q+ ++   Q   +  P       
Sbjct: 473 RHGMLSDQTRDQLMQQQLLQPFVDHQQPLQN-NNTSFQVLSNGQAQFPFTTTPGQGLL-- 529

Query: 534 NFMDSSTEISVSISP-MQNMLGSLP--EGSGNLLNFSGAGPSMLRQQFPQ-QSLGSKYEP 589
            F DS+   S S++P MQ     LP  E +  L N  G    ++    PQ + +  +   
Sbjct: 530 -FGDSTCAFSSSLTPTMQAFFTHLPCEENACLLNNLQGIKLMLIHNGSPQLKKVHFRRLS 588

Query: 590 SQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV 649
                F     L  +   K  A  + + N      ++FGV+I+   L+LP  VS+     
Sbjct: 589 LLCTQFRFHRFLAEAMRSKRTATDSHDQN------ILFGVNINMESLVLPNAVSNLAADD 642

Query: 650 -DPGVSSMPLGDSGFHN---SMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRS 705
             P   +M    SGFH+   S Y  ++ S  LLH+ GQ+D     +TFVKVYKSG VGRS
Sbjct: 643 GQPDTEAMQFTASGFHHPLPSAYDSLEVSPGLLHDPGQLD--PHCQTFVKVYKSGCVGRS 700

Query: 706 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 765
           LDI+RFSSYNELR+EL QMFG+EG  EDP RSGWQLV VDREND+LL+GDDPWEAFV++V
Sbjct: 701 LDIARFSSYNELRDELCQMFGLEGLLEDPQRSGWQLVLVDRENDILLMGDDPWEAFVNSV 760

Query: 766 WYIKILSPEDVQKMGEQ 782
           W IKILSP+DVQ+MG Q
Sbjct: 761 WSIKILSPQDVQQMGAQ 777


>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
          Length = 891

 Score =  871 bits (2250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/905 (56%), Positives = 600/905 (66%), Gaps = 108/905 (11%)

Query: 1   MKLSTSGLCQQGHE--GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN 58
           M++S+SG   Q  E  G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN
Sbjct: 1   MRVSSSGFNPQPEEATGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60

Query: 59  KEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELG 117
           KEVD+HIPNYP LPPQLICQLHN+TMHADVETDEVYAQMTLQPLSP+EQKD   +P ELG
Sbjct: 61  KEVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELG 120

Query: 118 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
           IPSKQPTNYFCKTLTAS TSTHGGFSVPRRAAEKVFP LD+S QPP QELIA+DLH  EW
Sbjct: 121 IPSKQPTNYFCKTLTASGTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEW 180

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS 237
           KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGD+V+FIWNE NQLLLGIRRA RP TVMPS
Sbjct: 181 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPS 240

Query: 238 SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
           SVLSSDSMHIGLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMR
Sbjct: 241 SVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMR 300

Query: 298 FRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           FRMLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAG+RQPRVSLWEIE
Sbjct: 301 FRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIE 360

Query: 358 PLTTFPMYPSLFPLRLKRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQS 414
           PLTTFPMYPS F LRLKRPW    PS + F +      S L+WLRG  G+QG+ +LNFQ 
Sbjct: 361 PLTTFPMYPSPFSLRLKRPWPSGLPSLTGFPNGDMAMNSPLSWLRGDMGDQGMQSLNFQG 420

Query: 415 LGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVR---QQFMQLQQPF-------- 463
            G+ P+MQ R++ S LG       Q  +   M + DP +   Q  MQ QQ          
Sbjct: 421 FGVTPFMQPRMDASLLG------LQPDILQTMAALDPSKLANQSLMQFQQSIPNSSASLS 474

Query: 464 --QYLQQSGS-QNPLQLKQQQHLLQ----------------------QLNSQAEDRAQQQ 498
             Q LQ S S QN +Q   + HL+                       Q   Q       Q
Sbjct: 475 QSQMLQPSHSHQNLIQGFSENHLISQAQMLQQQLQRRQNFNDQQQLLQPQLQQHQEVNSQ 534

Query: 499 QQPQQHMYHDALQIRTDELLQRQQSNLP--SPSFSKANFMD--SSTEISVSISPMQNMLG 554
            Q QQ     +   +   + Q   S+LP  S + S+  F D   +   S S S MQ++L 
Sbjct: 535 FQHQQRTKAISSLSQMASVTQPHLSHLPVLSSTGSQQTFSDMLGTHVNSSSNSNMQSLLS 594

Query: 555 SLP-EGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSM-------------- 599
           S   +G+  +LN     P +      ++       PS+V  FV S               
Sbjct: 595 SFSRDGAPAVLNMHETHPLVSSSSSSKRIALESQLPSRVTPFVLSQPENVIAPNTKVSDL 654

Query: 600 -SLPSSYNGKDAAVGTENCNTDSQNSVVFG----VHI-------------DSSGLLLPTT 641
            SL   + G+++    +    DSQ++ ++G    ++I             D+  L +P  
Sbjct: 655 SSLLPPFPGRESFSDYKGAE-DSQSNALYGFTDSLNILQTGMSNMKGSSGDNGSLSIPYA 713

Query: 642 VSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPT-RTFVKVYKSG 700
           +S+FT++V    +  PL      +S   C+ D S  L +    DQ   T R FVKV KSG
Sbjct: 714 ISTFTSTVG---NEYPLNSDMTASS---CV-DESGFLQSSENGDQANQTNRIFVKVQKSG 766

Query: 701 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 760
           S GRSLDIS+FSSY+ELR EL +MFG+EG  EDP RSGWQLV VDRENDVLLLGDDPW+ 
Sbjct: 767 SFGRSLDISKFSSYHELRSELARMFGLEGLLEDPERSGWQLVIVDRENDVLLLGDDPWQE 826

Query: 761 FVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR--------------ANSRGNCGRDPV 806
           FV+NVWYIKILSP +VQ+MG++G++  +    QR                SR      P+
Sbjct: 827 FVNNVWYIKILSPYEVQQMGKEGLDLLNGVRTQRLPGNVNGCDDYMNQKGSRNTMNGIPL 886

Query: 807 GSLEY 811
           GSL+Y
Sbjct: 887 GSLDY 891


>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
          Length = 914

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/900 (55%), Positives = 593/900 (65%), Gaps = 112/900 (12%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           ++KCLNSELWHACAGPLVSLP+VG+RVVYFPQGH EQVAA+TNKE+++ IPNYP+LPPQL
Sbjct: 23  EHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQL 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  S QPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQPTNYFCKTLTASD 142

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  +WKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTG 202

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASP EFVIP+ KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLDPVRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYPS F L LKR
Sbjct: 323 ITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSPFALGLKR 382

Query: 376 PWHPSTSSFNDNR-DETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S    R D   S L WLR      G  +LNF  LGM PWMQ R++ S LG   
Sbjct: 383 PWPAGLPSLYGGRGDGLTSSLMWLRD-RANPGFQSLNFSGLGMSPWMQPRLDNSLLGLQS 441

Query: 435 NQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLKQQQHLLQQLNSQA-- 491
           +       AA +QS    V    MQ QQP     +S   +   L+Q Q   QQ+  Q   
Sbjct: 442 DMYQTIAAAAALQSTTKQVPPSAMQFQQPQNIADRSALLSSQILQQVQPRFQQIYPQNLN 501

Query: 492 EDRAQ-----------------------------------------------QQQQPQQH 504
           E++ Q                                               QQ Q Q+H
Sbjct: 502 ENKIQGHTQPEYLQVQQQLQRCQSFNEQKPPMHPQQQQQEPQQQQCVQTPQDQQMQEQKH 561

Query: 505 MYH-----DALQIRTDELLQRQQSNLPS-----PSFS-KANFMDSS-TEISVSISP-MQN 551
           +++     DAL   +   L     + PS     P+FS + NF D++ + +S S  P M  
Sbjct: 562 LHNFHSLPDALSAFSQ--LSPATHSPPSALQTVPAFSHQQNFPDTNISSLSPSTGPSMHG 619

Query: 552 MLGSLP-EGSGNLLNFSGAGPSMLRQQFPQQSLGSK-YEPSQVRDFVH-------SMSLP 602
           MLG LP E + +L   +   P  +   +  + +  +   P +     H       + ++P
Sbjct: 620 MLGRLPSEAASSLPCVAMNAPVSVSDPWSSKRVAVESVNPCRPHVSPHIEHLDMATCNMP 679

Query: 603 SS-----YNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMP 657
            S       G++  V  + C +D QN ++FGVHIDS  LL+   + +     D    ++P
Sbjct: 680 QSSALAPLPGRECLVDEDGC-SDPQNHLLFGVHIDSHSLLMQGGIPALQN--DNSSGTIP 736

Query: 658 LGDSGFHN------------SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVG 703
              S F +               GC+ +S  L    N  Q +Q     TFVKVYKSG+VG
Sbjct: 737 YSTSNFLSPSENDFPLNQPLRSAGCLDESDYLPCAENAEQANQQF--ATFVKVYKSGTVG 794

Query: 704 RSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVS 763
           R LDI+RFSSY+ELR E+G++FG+EG+ EDPLRSGWQLVFVDRE+DVLL+GDDPW+ FV+
Sbjct: 795 RLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVN 854

Query: 764 NVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS-----------RG-NCGRDPVGSLEY 811
           +V  IKILSPE+VQ+MG+ G++  S +  +R  +           RG + G  PVGS+E+
Sbjct: 855 SVSCIKILSPEEVQRMGKPGIQLLSSAPSRRLGNGCDSYASMQEPRGLDAGMAPVGSVEF 914


>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
          Length = 905

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/900 (55%), Positives = 593/900 (65%), Gaps = 112/900 (12%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           ++KCLNSELWHACAGPLVSLP+VG+RVVYFPQGH EQVAA+TNKE+++ IPNYP+LPPQL
Sbjct: 14  EHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQL 73

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  S QPTNYFCKTLTASD
Sbjct: 74  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQPTNYFCKTLTASD 133

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  +WKFRHIFRGQPKRHLLTTG
Sbjct: 134 TSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTG 193

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 194 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 253

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASP EFVIP+ KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 254 AASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 313

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLDPVRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYPS F L LKR
Sbjct: 314 ITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSPFALGLKR 373

Query: 376 PWHPSTSSFNDNR-DETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S    R D   S L WLR      G  +LNF  LGM PWMQ R++ S LG   
Sbjct: 374 PWPAGLPSLYGGRGDGLTSSLMWLRD-RANPGFQSLNFSGLGMSPWMQPRLDNSLLGLQS 432

Query: 435 NQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLKQQQHLLQQLNSQA-- 491
           +       AA +QS    V    MQ QQP     +S   +   L+Q Q   QQ+  Q   
Sbjct: 433 DMYQTIAAAAALQSTTKQVPPSAMQFQQPQNIADRSALLSSQILQQVQPRFQQIYPQNLN 492

Query: 492 EDRAQ-----------------------------------------------QQQQPQQH 504
           E++ Q                                               QQ Q Q+H
Sbjct: 493 ENKIQGHTQPEYLQVQQQLQRCQSFNEQKPPMHPQQQQQEPQQQQCVQTPQDQQMQEQKH 552

Query: 505 MYH-----DALQIRTDELLQRQQSNLPS-----PSFS-KANFMDSS-TEISVSISP-MQN 551
           +++     DAL   +   L     + PS     P+FS + NF D++ + +S S  P M  
Sbjct: 553 LHNFHSLPDALSAFSQ--LSPATHSPPSALQTVPAFSHQQNFPDTNISSLSPSTGPSMHG 610

Query: 552 MLGSLP-EGSGNLLNFSGAGPSMLRQQFPQQSLGSK-YEPSQVRDFVH-------SMSLP 602
           MLG LP E + +L   +   P  +   +  + +  +   P +     H       + ++P
Sbjct: 611 MLGRLPSEAASSLPCVAMNAPVSVSDPWSSKRVAVESVNPCRPHVSPHIEHLDMATCNMP 670

Query: 603 SS-----YNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMP 657
            S       G++  V  + C +D QN ++FGVHIDS  LL+   + +     D    ++P
Sbjct: 671 QSSALAPLPGRECLVDEDGC-SDPQNHLLFGVHIDSHSLLMQGGIPALQN--DNSSGTIP 727

Query: 658 LGDSGFHN------------SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVG 703
              S F +               GC+ +S  L    N  Q +Q     TFVKVYKSG+VG
Sbjct: 728 YSTSNFLSPSENDFPLNQPLRSAGCLDESDYLPCAENAEQANQQF--ATFVKVYKSGTVG 785

Query: 704 RSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVS 763
           R LDI+RFSSY+ELR E+G++FG+EG+ EDPLRSGWQLVFVDRE+DVLL+GDDPW+ FV+
Sbjct: 786 RLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVN 845

Query: 764 NVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS-----------RG-NCGRDPVGSLEY 811
           +V  IKILSPE+VQ+MG+ G++  S +  +R  +           RG + G  PVGS+E+
Sbjct: 846 SVSCIKILSPEEVQRMGKPGIQLLSSAPSRRLGNGCDSYASMQEPRGLDAGMAPVGSVEF 905


>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
          Length = 898

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/869 (57%), Positives = 592/869 (68%), Gaps = 101/869 (11%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           +CLNSELWHACAGPLVSLP VG+RV           AA+TNKEVDS IPNYP+LPPQLIC
Sbjct: 18  RCLNSELWHACAGPLVSLPAVGSRV-----------AASTNKEVDSQIPNYPSLPPQLIC 66

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLHNVTMHADVETDEVYAQMTLQPLS +EQKD ++P +LG PSKQPTNYFCKTLTASDTS
Sbjct: 67  QLHNVTMHADVETDEVYAQMTLQPLSAQEQKDPYLPADLGTPSKQPTNYFCKTLTASDTS 126

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAEKVFP LDFS QPPAQEL+ARDLH  EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 127 THGGFSVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLTTGWS 186

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNE NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 187 VFVSAKRLVAGDSVLFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAA 246

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           ATNS FT+F+NPRASPSEFVIPLTKYVKAV+HTRVSVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 247 ATNSRFTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 306

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
           GISDLDPVRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYPS FPLR KRPW
Sbjct: 307 GISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSSFPLRFKRPW 366

Query: 378 HPSTSSFNDNRDET---ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG--N 432
                 F+  RD+     S L WLR G G   L +LNFQ +G+ PWMQ R+  S L    
Sbjct: 367 PTGLPFFHGGRDDEFSLNSPLMWLRDG-GNPALQSLNFQGVGVTPWMQPRLGTSMLALQP 425

Query: 433 DHNQQYQAMLAAGMQSGDPVRQ---QFMQLQQP------------FQYLQ--QSGSQNPL 475
           D +Q   A+    MQ+ D  +Q     +Q QQP             Q LQ  Q  S  PL
Sbjct: 426 DMHQTVAAVALQEMQTMDLTKQVTPAMLQFQQPQNTTSRSTPILQSQILQHAQPQSHQPL 485

Query: 476 -------QLKQQ------QHLLQQLNSQAEDRAQ----------QQQQPQQHMYHDALQ- 511
                  Q++ Q      QH LQQ +S AE + Q          + QQ QQ     A Q 
Sbjct: 486 LHTIQGNQMQSQAQSQFLQHHLQQGHSFAEQQQQQQHNLQLQIPEHQQFQQQRVLPAYQQ 545

Query: 512 ----------IRTDELLQRQQSNLPSPSFSKANFMDS--STEISVSISPMQNMLGSL-PE 558
                     + +    Q    N+ SPS    +F DS  ++  + S+SP+ N+L  + PE
Sbjct: 546 VPYGAANLSQLSSSSQSQSTTLNMISPSSQLKDFPDSNGNSVSASSVSPLDNILHQISPE 605

Query: 559 GSGNLLNFSGAGPSMLRQQFPQQSL--------GSKYEPSQVRDF--------VHSMSLP 602
            +  LL+       +    +  + +        G++   SQV           + S+ LP
Sbjct: 606 ETSQLLSLPRYAQPVTSNPWSSKRIAVESMLPSGAQSVLSQVEQIGSGQPNIPLQSVVLP 665

Query: 603 SSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLL------LPTTVSSFTTSVDPGVSSM 656
             + G++ ++  ++ N D QN  +FGV+IDSS  +      L T V+   ++  P  +  
Sbjct: 666 -PFPGRECSM-NQDGNMDIQNQHMFGVNIDSSISVQNGIRSLGTGVNGTNSTNIPYAACN 723

Query: 657 PLGDSG----FHNSMYGCMQ-DSSELLHNVGQIDQL-TPTRTFVKVYKSGSVGRSLDISR 710
            L  +G     + ++ G    D S LL +   +D++ + + TFVKVYKSGS GRSLDI+R
Sbjct: 724 LLRSAGNDFPINQAVNGSNGLDESGLLQSTENVDRVNSQSGTFVKVYKSGSFGRSLDITR 783

Query: 711 FSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 770
           FSSY+ELR ELG +FG+EG+ EDPLRSGWQLVFVDRE+DVLL+GDDPW+ FV++V  IKI
Sbjct: 784 FSSYHELRSELGHLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKI 843

Query: 771 LSPEDVQKMGEQGVESFSPSSGQRANSRG 799
           LSPE+VQ+MG+QGV+  + +  +R  S G
Sbjct: 844 LSPEEVQQMGKQGVDFVNSAPIKRLQSNG 872


>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
          Length = 832

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/833 (57%), Positives = 573/833 (68%), Gaps = 58/833 (6%)

Query: 1   MKLSTSGLCQQGH----EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAAT 56
           M+LS++G     H     G+ + LNSELWHACAGPLVSLP +G+RVVYFPQGHSEQVAA+
Sbjct: 1   MRLSSAGFNPHPHPHEVTGEKRVLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAAS 60

Query: 57  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL 116
           TNKEVD+H PNYP+L PQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKD+++  EL
Sbjct: 61  TNKEVDAHTPNYPSLQPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDSYLAAEL 120

Query: 117 GIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE 176
           G+PS+QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD++ QPPAQEL+ARDLHD E
Sbjct: 121 GVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELMARDLHDNE 180

Query: 177 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP 236
           WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMP
Sbjct: 181 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRAHRPQTVMP 240

Query: 237 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 296
           SSVLSSDSMH+GLLAAAAHAA TNS FT+F+NPRAS SEFVIPL KYVKAV+HTRVSVGM
Sbjct: 241 SSVLSSDSMHLGLLAAAAHAAPTNSRFTIFYNPRASTSEFVIPLAKYVKAVYHTRVSVGM 300

Query: 297 RFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 356
           RFRMLFETEESSVRRYMGTITGI DLDP RW+NSHWRSVKVGWDESTAG+RQPRVSLWEI
Sbjct: 301 RFRMLFETEESSVRRYMGTITGICDLDPARWANSHWRSVKVGWDESTAGDRQPRVSLWEI 360

Query: 357 EPLTTFPMYPSLFPLRLKRPWHPSTSSFND-NRDETASGLNWLRGGTGEQGLTTLNFQSL 415
           EPLTTFPMYPS FPLRLKRPW     SF+    D+   G+        ++GL ++NFQ +
Sbjct: 361 EPLTTFPMYPSPFPLRLKRPWPSGLPSFHGLKEDDMGMGMGMSSPLMWDRGLQSMNFQGM 420

Query: 416 GMFPWMQQRVEPS-FLG--NDHNQQYQAMLAAGMQSGDPVR--QQFMQLQQPFQYLQQSG 470
           G+ PWMQ R++ S  LG  ND  Q   A     M+  DP +     +Q Q P  +  Q  
Sbjct: 421 GVNPWMQPRLDASGLLGMQNDAYQAMAAAALQDMRGIDPAKAAASLLQFQSPSGFSMQPP 480

Query: 471 SQNPLQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSF 530
           S    Q+ QQQ   QQ                       LQ  T   L  QQ      SF
Sbjct: 481 SLVQPQMLQQQLSQQQQQVVDNHNLSASSAAMSQSNTSLLQSMTP--LCHQQ------SF 532

Query: 531 SKANFMDSSTEISVSISPMQNMLGSLPEG-SGNLLNFSGAGPSMLRQQFPQQ--SLGSKY 587
           S  N  ++       I+ +  +L + P+  S  LLN +    +M    +P +  ++ S +
Sbjct: 533 SDTNGGNN------PITQLHTLLSNFPQDESSQLLNLTRTNSAMTSSGWPSKRPAIDSSF 586

Query: 588 EPSQV----RDFVHSMSLPSSYNGKDAAV-------GTENCNTDSQNSVVFGVHIDSSGL 636
           + S      +  +  +    + N    AV       G E  ++D  + ++FGV+IDSS L
Sbjct: 587 QHSTAVNNNQSVMEQLGQSHTSNVSPNAVSLPPFPSGQEENHSDPHSHLLFGVNIDSSSL 646

Query: 637 LLPTTVSSF-TTSVDPGVS-SMPLGDSGFHNSMYGCMQDSSELLHNVG--QIDQLTPTRT 692
           L+P  +S+  +  ++ G S ++P   S F+N   G M   S  +   G  Q  +   + T
Sbjct: 647 LIPNGMSNLRSIGIEGGDSTTLPFTSSTFNNEFSGTMTTPSSCIEEPGFLQPSENQQSNT 706

Query: 693 FVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
           FVKVYKSGS GRSLDI++FSSYNELR EL +MFG+EG+ EDP+RSGWQLVFV RE     
Sbjct: 707 FVKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGQLEDPVRSGWQLVFVGREE---- 762

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF--SPSSGQ--RANSRGNC 801
                   FVS+VW IKILSP++VQ+MG++G+E    +PSS    +  S GNC
Sbjct: 763 --------FVSSVWCIKILSPQEVQQMGKRGLELLNSAPSSDNVDKVPSNGNC 807


>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
 gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
          Length = 834

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/834 (57%), Positives = 572/834 (68%), Gaps = 65/834 (7%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S + + QQ  E + KCLNSELWHACAGPLV LPTV TRVVYFPQGHSEQVAA+TNKEVD 
Sbjct: 5   SAASIGQQPPEEEKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDG 64

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP 123
           HIPNYPNLPPQLICQLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQP
Sbjct: 65  HIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQP 124

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLD----FSL------------QPPAQEL 167
           TNYFCKTLTASDTSTHGGFSVPRRAAE+VFP L     F L            + P    
Sbjct: 125 TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLLHAGLFGLLLQITGGIVCRQRIPLSSR 184

Query: 168 IARDLHDV-EWKFRHIFRG----QPKRHLLT-TGWSVFVSAKRL-----VAGDSVLFIWN 216
             ++L +   W  R + R     +P R + T   W V  + +R      V G   L   N
Sbjct: 185 QRQELRNPGSWNGRALARKSRTEKPCRTIETGRCWIVGTAQRRTGWPCGVPGGPGLG--N 242

Query: 217 EKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEF 276
           EKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAAATNS FT+FFNPRASPSEF
Sbjct: 243 EKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEF 302

Query: 277 VIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVK 336
           VIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT +SD DPVRW +S+WRSVK
Sbjct: 303 VIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVK 362

Query: 337 VGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN 396
           VGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW+   ++ +D+    ++ L 
Sbjct: 363 VGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWYSGVAALHDD----SNALM 418

Query: 397 WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDP-VRQQ 455
           WLRG  GE G  +LNFQS G+  W QQR+ PS L NDH+Q    + AA     D  ++QQ
Sbjct: 419 WLRGVAGEGGFQSLNFQSPGVGSWGQQRLHPSLLSNDHDQYQAVVAAAAASQSDGYLKQQ 478

Query: 456 FMQLQQPFQYLQQSGSQNPLQLK--------------QQQHLLQQLNSQAEDRAQQQQQP 501
           F+ LQQP Q  Q+  + NPL  +                Q++   LN  A  +  QQ Q 
Sbjct: 479 FLHLQQPMQSPQEQCNLNPLLQQQILQQGSQQQMVSPDAQNIQSVLNPNAIQQQLQQFQQ 538

Query: 502 QQHMYHDALQ-IRTDELLQRQQS-------NLPSPSFSKANFMD--SSTEISVSISPMQN 551
            QH ++D  Q I+ D+  Q   S       +LPS    K  F D   ++   +S S  +N
Sbjct: 539 MQHAHNDQKQKIQPDQPYQVPSSAVLSSPTSLPSHLREKFGFSDPNVNSSSFISSSSNEN 598

Query: 552 MLGS-LPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDA 610
           ML S   +GS   ++ S     ++ +Q  QQ+   K+  SQ   F  S+SL +S   KD 
Sbjct: 599 MLESNFLQGSSKSVDLSRFNQPVVSEQQQQQAWKQKFICSQSMSFGGSVSL-NSPTTKDG 657

Query: 611 AVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYG 669
            V  +    D QN  +F   +DSS LL    V + T++V D  +S++P G +   + MYG
Sbjct: 658 PVDNK-IGRDVQNQTLFSPQVDSSSLLY-NMVPNLTSNVADNNISTIPSGSTYLQSPMYG 715

Query: 670 CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEG 729
           C+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLDI+RFS+Y ELREELGQMFGI+G
Sbjct: 716 CLDDSSGLLQNTGENDPT--TRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKG 773

Query: 730 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           + +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWYIKILSPEDV KMG+ G
Sbjct: 774 QLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPG 827


>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
          Length = 856

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/849 (55%), Positives = 554/849 (65%), Gaps = 128/849 (15%)

Query: 57  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL 116
           TNKEVD+HIPNYP+LPPQLICQLH+V MHAD ETDEVYAQMTLQPL+ +EQKD ++P EL
Sbjct: 1   TNKEVDTHIPNYPSLPPQLICQLHDVIMHADAETDEVYAQMTLQPLTLQEQKDAYLPAEL 60

Query: 117 GIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE 176
           G PS+QPTNYFCK LTASDTSTHGGFSVPRRAAEKVFP LDF+ QPP+QELIARDLH  E
Sbjct: 61  GTPSRQPTNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLHGNE 120

Query: 177 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP 236
           WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGD+V+FIWNEKNQLLLGIRR  RP +VMP
Sbjct: 121 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNEKNQLLLGIRRGNRPQSVMP 180

Query: 237 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 296
           SSVLSSDSMHIGLLAAAAHAAATNS FTVF+ PRASPSEFVIPLT+Y KAVFHTR+SVGM
Sbjct: 181 SSVLSSDSMHIGLLAAAAHAAATNSRFTVFYXPRASPSEFVIPLTRYAKAVFHTRISVGM 240

Query: 297 RFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 356
           RFRMLFETEESSVRRYMGTITGI DLDP RW NSHWRS+KVGWDESTAGERQPRVSLWEI
Sbjct: 241 RFRMLFETEESSVRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSLWEI 300

Query: 357 EPLTTFPMYPSLFPLRLKRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQ 413
           EPLTTFPMYPS FPLRL+RPW    PS     D+     S L WLRG   ++G  +LNFQ
Sbjct: 301 EPLTTFPMYPSPFPLRLRRPWPSGLPSLHGIKDDNLGLNSSLMWLRGNGIDRGFQSLNFQ 360

Query: 414 SLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQ-----QFMQLQQ------- 461
            +G+ PWMQ R + S LG      +  M  A  Q    V +       MQ +Q       
Sbjct: 361 GIGVNPWMQPRFDSSLLG-----MHPEMAPAAFQETRTVDRTKLASTVMQFRQQLPHNMS 415

Query: 462 ----PF---QYL---------------QQSGSQNPL---QLKQQQHLL-QQLNSQAEDRA 495
               PF   Q +               Q+S  Q+ +   Q +QQ+ L+ + ++ Q   ++
Sbjct: 416 SRSVPFLQSQIMQQTQPQSQQTLRSAPQESQPQSHMLTHQFQQQRSLIHEHIHHQQTQKS 475

Query: 496 QQQQQPQQHMYHDALQIRTDELLQRQQSNLPS----------------------PSFSKA 533
            Q Q+PQQH      Q+    + Q+Q   +P+                      PS  + 
Sbjct: 476 HQCQEPQQHHQ----QLPNQNVPQQQSFQIPNIVSELSQLSQLSSSHSPSLQNVPSLCQT 531

Query: 534 -NFMDS---STEISVS-ISPMQNMLGSL-PEGSGNLLNF-------------------SG 568
            NFMDS      IS + +S +Q ++GS+ P+   +L N                      
Sbjct: 532 QNFMDSVLHDNAISATNMSALQKIMGSISPDDQSHLFNLPPTVPPVSSSSWPSKEIAVGS 591

Query: 569 AGPSMLR--QQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVV 626
             PS  R  Q   QQS+      S      HS+SLP  + G+D+A+          NS++
Sbjct: 592 VLPSGGRSGQHTLQQSVSQTQSASH-----HSISLP-PFPGRDSAID-HGVGDPQSNSIL 644

Query: 627 FGVHIDSSGLLL--PTTVSSFT-----TSVDPGVSS--------MPLGDSGFHNSMYGCM 671
           FGV+IDSS L+   PT + + +     T+   G S+        +PL  S    S  GC 
Sbjct: 645 FGVNIDSSQLMQNGPTPIGASSNDNTQTAFSCGGSNHLTAPRAYLPLNSS--MGSSSGCF 702

Query: 672 QDSSELL---HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIE 728
            D +  L    +VG +D   P RTFVKV+K GS GRSLDI+ FSSY+ELR EL  MFG+E
Sbjct: 703 MDENGFLTSPDDVGLVD--PPDRTFVKVHKLGSYGRSLDITNFSSYHELRSELASMFGLE 760

Query: 729 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFS 788
           G+ EDPLRSGWQLVFVDRENDVLLLGDDPW+ FV+NVW IKILSP++VQ+MG Q +    
Sbjct: 761 GQLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWCIKILSPQEVQQMGRQDLALLH 820

Query: 789 PSSGQRANS 797
             S QR +S
Sbjct: 821 SISLQRQDS 829


>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
          Length = 831

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/794 (57%), Positives = 531/794 (66%), Gaps = 108/794 (13%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 85

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSP-----------------EEQKDTFVPIELGIPS 120
           QLH+VTMHADVETDEVYAQMTLQPL+P                 +EQ D ++P E+GI S
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMS 145

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFR
Sbjct: 146 KQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFR 205

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 206 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVL 265

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNS FT+F+NP                               
Sbjct: 266 SSDSMHIGLLAAAAHAAATNSRFTIFYNP------------------------------- 294

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
                     RYMGTIT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLT
Sbjct: 295 ----------RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLT 344

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPSLFPLR+K PW+   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W
Sbjct: 345 TFPMYPSLFPLRVKHPWYSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSW 400

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK- 478
            QQR+ PS L +DH+Q    + AA        ++QQF+ LQQP Q  Q+  + NPL  + 
Sbjct: 401 GQQRLHPSLLSSDHDQYQAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQ 460

Query: 479 -------------QQQHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQ 511
                          Q++   L+  A              ++  +Q+ QP Q     + Q
Sbjct: 461 ILQQASQQQIINPDAQNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQ 515

Query: 512 IRTDELLQRQQSNLPSPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSG 568
           + T  +L    S LPS    K  F D  +++   ++ S   NML  S  +GS   ++ S 
Sbjct: 516 VPTSAVLPSPTS-LPSHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSR 574

Query: 569 AGPSMLRQQFPQQSLG--SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVV 626
               +  +Q  QQ      K+  SQ   F  S+ L +S   KD +V  +    D QN  +
Sbjct: 575 FNQPVASEQQQQQQQAWKQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSL 632

Query: 627 FGVHIDSSGLLLPTTVSSFTTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQID 685
           F   +DSS LL    V + T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D
Sbjct: 633 FSPQVDSSSLLY-NMVPNLTSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND 691

Query: 686 QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 745
               TRTFVKVYKSGSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVD
Sbjct: 692 --PATRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVD 749

Query: 746 RENDVLLLGDDPWE 759
           RENDVLLLGDDPWE
Sbjct: 750 RENDVLLLGDDPWE 763


>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 908

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/471 (79%), Positives = 408/471 (86%), Gaps = 10/471 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS +G   Q  EG+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE
Sbjct: 1   MRLSPAGFTHQTQEGEKRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSP+EQKD ++P ELG+PS
Sbjct: 61  VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KY KAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS FPLRLKRPW P   S +  +D+     S L WLRG   ++G+ +LNFQ +G+
Sbjct: 361 TFPMYPSPFPLRLKRPWPPGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGV 420

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQ---FMQLQQP 462
            PWMQ R++ S LG      YQAM AA +Q   + DP +Q     +  QQP
Sbjct: 421 NPWMQPRLDASMLGL-QTDMYQAMAAAALQEMRAVDPSKQAPAPLLHYQQP 470


>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/471 (79%), Positives = 408/471 (86%), Gaps = 10/471 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS +G   Q  EG+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE
Sbjct: 1   MRLSPAGFTHQTQEGEKRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSP+EQKD ++P ELG+PS
Sbjct: 61  VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KY KAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS FPLRLKRPW P   S +  +D+     S L WLRG   ++G+ +LNFQ +G+
Sbjct: 361 TFPMYPSPFPLRLKRPWPPGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGV 420

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQ---FMQLQQP 462
            PWMQ R++ S LG      YQAM AA +Q   + DP +Q     +  QQP
Sbjct: 421 NPWMQPRLDASMLG-LQTDMYQAMAAAALQEMRAVDPSKQAPAPLLHYQQP 470


>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
 gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
          Length = 478

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/450 (82%), Positives = 401/450 (89%), Gaps = 5/450 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS++G   Q  EG+N+ LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE
Sbjct: 1   MRLSSAGFNPQTQEGENRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSP+EQKD ++P ELG P+
Sbjct: 61  VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGTPN 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS FPLRLKRPW P   SF+  +D+     S L WLRG   ++G+ ++NFQ LG+
Sbjct: 361 TFPMYPSPFPLRLKRPWPPGLPSFHGIKDDDLGMNSPLMWLRGD-ADRGIQSMNFQGLGV 419

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ 447
            PWMQ RV+ S LG      YQAM AA +Q
Sbjct: 420 TPWMQPRVDASMLGL-QTDMYQAMAAAALQ 448


>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
          Length = 914

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/450 (82%), Positives = 398/450 (88%), Gaps = 5/450 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLS+S    Q  EG+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE
Sbjct: 1   MKLSSSSFSHQSQEGEKRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKD F+P +LG   
Sbjct: 61  VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDAFLPADLGTSG 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIGLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS FPLRLKRPW P   S + N+D+    ++ L WLR G  ++ + +LNFQ LG+
Sbjct: 361 TFPMYPSPFPLRLKRPWPPGLPSLHGNKDDDLGMSAPLMWLRDG-ADRNMQSLNFQGLGV 419

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ 447
            PWM QR + S LG   +  YQAM AA +Q
Sbjct: 420 SPWMPQRFDSSLLGM-QSDVYQAMAAAALQ 448



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/309 (40%), Positives = 170/309 (55%), Gaps = 51/309 (16%)

Query: 529 SFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQ--FPQQSLGSK 586
           SFS +N    +T    SISP+Q++LGS P    + LN      + L +    P     SK
Sbjct: 590 SFSDSNGNPVTT---TSISPLQSILGSFPPDESSHLNLPRTNSATLPRDHMLPSAPWLSK 646

Query: 587 Y-----------------------EPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQN 623
                                   +P+  +  V  +  P    G++ +V  E    D Q+
Sbjct: 647 RISIDSSLPSGGPIVLPHVEQLATQPNMAQHPVSLLPFP----GRECSVDQEGSVGDPQS 702

Query: 624 SVVFGVHIDSSGLLLPTTVSSFTT---SVDPGVS-----SMPLGDSG--FHN---SMYGC 670
            ++FGV+IDSS L++   VS+       +DP  +     S  LG++G  F N   +  GC
Sbjct: 703 HLLFGVNIDSSSLMMQNGVSALRGLGGDIDPSAALSYAASNFLGNTGTDFLNPGMAGSGC 762

Query: 671 MQDSSELL--HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIE 728
           + +S  L    NVGQI+     + FVKV KSGS GRSL+I+RFSSY ELR EL +MFG+E
Sbjct: 763 LNESGFLPSPENVGQIN----PQNFVKVCKSGSFGRSLEITRFSSYLELRSELARMFGLE 818

Query: 729 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFS 788
           G+ EDPLRSGWQL+++DR+NDVLLLGDDPW  FV N   IKILSP+++Q+MG+QG+E   
Sbjct: 819 GQLEDPLRSGWQLIYIDRDNDVLLLGDDPWPDFVKNASCIKILSPQELQQMGKQGIELLR 878

Query: 789 PSSGQRANS 797
               QR  S
Sbjct: 879 TVPMQRQQS 887


>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
 gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
 gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
 gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
          Length = 933

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/452 (79%), Positives = 397/452 (87%), Gaps = 11/452 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LS++G   Q HEG+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE
Sbjct: 1   MRLSSAGFNPQPHEGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIPNYP+L PQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKD ++P ELG+PS
Sbjct: 61  VDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD+S QPPAQEL+ARDLHD EWKFR
Sbjct: 121 RQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGI DLDP RW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDE-----TASGLNWLRGGTGEQGLTTLNFQSL 415
           TFPMYPS FPLRLKRPW P   SF+  +++      +S L W      ++GL +LNFQ +
Sbjct: 361 TFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQGM 414

Query: 416 GMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ 447
           G+ PWMQ R++ S L    N  YQAM AA +Q
Sbjct: 415 GVNPWMQPRLDTSGLLGMQNDVYQAMAAAALQ 446



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 109/220 (49%), Positives = 149/220 (67%), Gaps = 15/220 (6%)

Query: 597 HSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSVDPGVSS 655
           +++SLP    G++ ++  E   +D  + ++FGV+IDSS LL+P  +S+  +  ++ G S+
Sbjct: 689 NAVSLPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDST 748

Query: 656 -MPLGDSGFHNSMYGCMQ--------DSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRS 705
            +P   S F+N   G +         D S  L +   +    P + TFVKVYKSGS GRS
Sbjct: 749 TLPFTSSNFNNDFSGNLAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRS 808

Query: 706 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 765
           LDIS+FSSY+ELR EL +MFG+EG+ EDP+RSGWQLVFVDRENDVLLLGDDPW  FVS+V
Sbjct: 809 LDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSV 868

Query: 766 WYIKILSPEDVQKMGEQGVESF--SPSSGQ--RANSRGNC 801
           W IKILSP++VQ+MG++G+E    +PSS    +  S GNC
Sbjct: 869 WCIKILSPQEVQQMGKRGLELLNSAPSSNNVDKLPSNGNC 908


>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 916

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/473 (77%), Positives = 404/473 (85%), Gaps = 8/473 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LST+G   Q  EG+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN+E
Sbjct: 1   MRLSTAGFSPQAPEGERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNRE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIP+YP+LPPQLICQLHNVTMHAD+ETDEVYAQMTLQPL+ +EQK+ ++P ELG PS
Sbjct: 61  VDAHIPSYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEF+IPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETA---SGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS FPLRLKRPW     SF+  +++     S L WLRG   ++G+  LNF  +G+
Sbjct: 361 TFPMYPSPFPLRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGV 420

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQ 467
            PWMQ R++ S +G    + YQAM AA +Q   + DP + Q   L Q FQ  Q
Sbjct: 421 APWMQPRLDASMVG-LQPEIYQAMAAAALQEMRTVDPAKAQAASLLQ-FQQTQ 471


>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
          Length = 916

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/473 (77%), Positives = 404/473 (85%), Gaps = 8/473 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+LST+G   Q  EG+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN+E
Sbjct: 1   MRLSTAGFSPQAPEGERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNRE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+HIP+YP+LPPQLICQLHNVTMHAD+ETDEVYAQMTLQPL+ +EQK+ ++P ELG PS
Sbjct: 61  VDAHIPSYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEF+IPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETA---SGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS FPLRLKRPW     SF+  +++     S L WLRG   ++G+  LNF  +G+
Sbjct: 361 TFPMYPSPFPLRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGV 420

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQ 467
            PWMQ R++ S +G    + YQAM AA +Q   + DP + Q   L Q FQ  Q
Sbjct: 421 APWMQPRLDASMVG-LQPEIYQAMAAAALQEMRTVDPAKAQAASLLQ-FQQTQ 471


>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
 gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
 gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
 gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
          Length = 935

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/454 (79%), Positives = 397/454 (87%), Gaps = 13/454 (2%)

Query: 1   MKLSTSGLCQQGHE--GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN 58
           M+LS++G   Q HE  G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN
Sbjct: 1   MRLSSAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60

Query: 59  KEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI 118
           KEVD+HIPNYP+L PQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKD ++P ELG+
Sbjct: 61  KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV 120

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           PS+QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD+S QPPAQEL+ARDLHD EWK
Sbjct: 121 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWK 180

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMPSS
Sbjct: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSS 240

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           VLSSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRF
Sbjct: 241 VLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 300

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RMLFETEESSVRRYMGTITGI DLDP RW+NSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 301 RMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP 360

Query: 359 LTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDE-----TASGLNWLRGGTGEQGLTTLNFQ 413
           LTTFPMYPS FPLRLKRPW P   SF+  +++      +S L W      ++GL +LNFQ
Sbjct: 361 LTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQ 414

Query: 414 SLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ 447
            +G+ PWMQ R++ S L    N  YQAM AA +Q
Sbjct: 415 GMGVNPWMQPRLDTSGLLGMQNDVYQAMAAAALQ 448



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 109/220 (49%), Positives = 149/220 (67%), Gaps = 15/220 (6%)

Query: 597 HSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSVDPGVSS 655
           +++SLP    G++ ++  E   +D  + ++FGV+IDSS LL+P  +S+  +  ++ G S+
Sbjct: 691 NAVSLPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDST 750

Query: 656 -MPLGDSGFHNSMYGCMQ--------DSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRS 705
            +P   S F+N   G +         D S  L +   +    P + TFVKVYKSGS GRS
Sbjct: 751 TLPFTSSNFNNDFSGNLAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRS 810

Query: 706 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 765
           LDIS+FSSY+ELR EL +MFG+EG+ EDP+RSGWQLVFVDRENDVLLLGDDPW  FVS+V
Sbjct: 811 LDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSV 870

Query: 766 WYIKILSPEDVQKMGEQGVESF--SPSSGQ--RANSRGNC 801
           W IKILSP++VQ+MG++G+E    +PSS    +  S GNC
Sbjct: 871 WCIKILSPQEVQQMGKRGLELLNSAPSSNNVDKLPSNGNC 910


>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 891

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/454 (79%), Positives = 396/454 (87%), Gaps = 13/454 (2%)

Query: 1   MKLSTSGLCQQGHE--GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN 58
           M+LS++G   Q HE  G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN
Sbjct: 1   MRLSSAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60

Query: 59  KEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI 118
           KEVD+HIPNYP+L PQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKD ++P ELG+
Sbjct: 61  KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV 120

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           PS+QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD+S QPPAQEL+ARDLHD EWK
Sbjct: 121 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWK 180

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMPSS
Sbjct: 181 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSS 240

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           VLSSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRF
Sbjct: 241 VLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF 300

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RMLFETEESSVRRYMGTITGI DLDP RW+NSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 301 RMLFETEESSVRRYMGTITGICDLDPSRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP 360

Query: 359 LTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDE-----TASGLNWLRGGTGEQGLTTLNFQ 413
           LTTFPMYPS FPLRLKRPW P   SF+  +++      +S L W      ++GL +LNFQ
Sbjct: 361 LTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQ 414

Query: 414 SLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ 447
            +G  PWMQ R++ S L    N  YQAM AA +Q
Sbjct: 415 GMGGNPWMQPRLDASGLLGMQNDVYQAMAAAALQ 448


>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 904

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/478 (76%), Positives = 402/478 (84%), Gaps = 12/478 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLS+ G      EG+ + L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN+E
Sbjct: 1   MKLSSPGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQLICQLHN+TMHAD ETDEVYAQMTLQPL+P+EQK  ++P ELG PS
Sbjct: 61  VDGHIPNYPSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLNPQEQKGAYLPAELGTPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCK LTASDTSTHGGFSVPRRAAEKVFP LDFS QPP QELIARDLH  EWKFR
Sbjct: 121 KQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP  VMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD +RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGM 417
           TFPMYPS FPLRLKRPW P    F+  +D+     S L WLR    ++GL +LNFQ +G+
Sbjct: 361 TFPMYPSPFPLRLKRPWPPGLPLFHGLKDDDFGINSSLMWLRD--TDRGLPSLNFQGIGV 418

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQ---FMQLQQPFQYLQQS 469
            PWMQ R++PS + N  +  YQAM AA +Q   + +P +Q     +Q QQP  +  Q+
Sbjct: 419 SPWMQPRLDPSMV-NYQSDMYQAMAAAALQDMWTSNPSKQHPTSSIQFQQPQNFPNQT 475



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 144/234 (61%), Gaps = 24/234 (10%)

Query: 597 HSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFT-TSVDPGVSS 655
           + ++LP+ + G++  +   N   D QN ++FGV+I+ S LL+   +SS    S +    +
Sbjct: 676 NGIALPA-FPGRECTIEGSN---DPQNHLLFGVNIEPSSLLMHNGMSSLKGVSSNSDSPT 731

Query: 656 MPLGDSGFHNSMYGCMQDSSELLHNVGQIDQL-TP---------TRTFVKVYKSGSVGRS 705
           +P   S + N+       +  + HN+G+   L TP          +TFVKVYKSGS GRS
Sbjct: 732 IPFQSSNYLNTTGPDSSLNPGMTHNIGETGFLQTPENGGQGNPSNKTFVKVYKSGSFGRS 791

Query: 706 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 765
           LDI++F+SY ELR EL +MFG+EG+ EDP+RSGWQLVFVD+ENDVLLLGD PW  FV++V
Sbjct: 792 LDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSV 851

Query: 766 WYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC--------GRDPVGSLEY 811
            YIKILSP++VQ+MG   +E  +    QR  S G C        G   VGSL Y
Sbjct: 852 GYIKILSPQEVQQMGNNELELLNSVPIQRL-SNGVCEDPRNLSTGITTVGSLNY 904


>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
          Length = 831

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/458 (77%), Positives = 396/458 (86%), Gaps = 5/458 (1%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K LNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLPPQLIC
Sbjct: 28  KNLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLIC 87

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 88  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 147

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 148 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWS 207

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVSAKRLVAGDSVLFIWNEKNQL LGIRRA R  TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 208 VFVSAKRLVAGDSVLFIWNEKNQLWLGIRRASRTQTVMPSSVLSSDSMHIGLLAAAAHAA 267

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           +TNS FT+F+NPRA PSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 268 STNSRFTIFYNPRACPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 327

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
            +SD DPVRW++S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 328 EVSDADPVRWASSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 387

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 437
           +   +  +D+    ++ L WLRG  G+ G  +LNFQS G+ PW QQR+ PS +  DH+Q 
Sbjct: 388 YSGVAGLHDD----SNALMWLRGVAGDGGYQSLNFQSPGIGPWGQQRLHPSLMSTDHDQY 443

Query: 438 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP 474
              + AA        ++QQF+ LQQP Q  Q+  + NP
Sbjct: 444 QAVVAAAAASQSGGYMKQQFLNLQQPMQSPQEHCNLNP 481


>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
          Length = 934

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/491 (74%), Positives = 406/491 (82%), Gaps = 21/491 (4%)

Query: 13  HEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 72
           ++G+ +CLNSELWHACAGPLVSLP VG+RV+YFPQGHSEQVAA+TNKEVD  IPNYPNLP
Sbjct: 56  NDGEQRCLNSELWHACAGPLVSLPVVGSRVIYFPQGHSEQVAASTNKEVDGQIPNYPNLP 115

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 132
           PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK+ F+PIELG  SKQPTNYFCKTLT
Sbjct: 116 PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQPTNYFCKTLT 175

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRR+AEKVFP LDFSLQPP QELIARDLHD EWKFRHIFRGQPKRHLL
Sbjct: 176 ASDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHLL 235

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIR A RP T+MPSSVLSSDSMHIGLLAA
Sbjct: 236 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTIMPSSVLSSDSMHIGLLAA 295

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAAATNS FT+F+NPR+SPSEFVIPL KYVK+V+HTRVSVGMRFRMLFETEESSVRRY
Sbjct: 296 AAHAAATNSRFTIFYNPRSSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRY 355

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           MGT+T ISDLD VRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYP+ FPLR
Sbjct: 356 MGTVTAISDLDSVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPTAFPLR 415

Query: 373 LKRPWHPSTSS----FNDNRDET---ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRV 425
           LKRPW     S    FN  +++     S L WL  G G++G  + NFQ LG+ PW+Q R+
Sbjct: 416 LKRPWASGLPSMHGMFNGVKNDDFARYSSLMWL--GNGDRGTQSSNFQGLGVSPWLQPRI 473

Query: 426 EPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQ--QSGSQNPLQLKQQ 480
           E   LG   +  YQ M AA ++   +GDP+ Q    LQ  FQ  Q    G  +P      
Sbjct: 474 ESPLLGLKPD-TYQQMAAAALEEIRAGDPLIQSSALLQ--FQQTQNLNGGLDSPY----A 526

Query: 481 QHLLQQLNSQA 491
            H+LQQ+  Q+
Sbjct: 527 NHVLQQMQYQS 537



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 76/134 (56%), Positives = 99/134 (73%), Gaps = 4/134 (2%)

Query: 670 CMQDSSELLHNVGQIDQLTPTR--TFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGI 727
           C+ +S+   +++  I  + P++  TFVKVYKSGS GRSLDI++FSSY ELR EL  +FG+
Sbjct: 779 CLGESATF-NSLDNICGVNPSQGGTFVKVYKSGSPGRSLDITKFSSYYELRSELEHLFGL 837

Query: 728 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 787
           EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ FV++VW IKILSP+DV +M   G E  
Sbjct: 838 EGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFVNSVWCIKILSPQDVHQMVRNG-EGL 896

Query: 788 SPSSGQRANSRGNC 801
             +SG R      C
Sbjct: 897 LSASGARMMQGNVC 910


>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
          Length = 897

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/447 (80%), Positives = 387/447 (86%), Gaps = 9/447 (2%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPP
Sbjct: 16  DGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPP 75

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 133
           QLICQLHNVTMHAD ET+EVYAQMTLQPLSPEEQKD F+PIELG  SKQPTNYFCKTLTA
Sbjct: 76  QLICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKDPFLPIELGAGSKQPTNYFCKTLTA 135

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAEKVFP LDFS QPP QEL+ARDLHD EWKFRHIFRGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVFVSAKRLVAGDS++FIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GTITGISDLD  RW NSHWRSVKVGWDESTAG++QPRVSLWEIEPLTTFPMYP+ FPLRL
Sbjct: 316 GTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPMYPTAFPLRL 375

Query: 374 KRPWHPSTSSFNDNR-DETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 430
           KRPW      FN  R DE A  S L WLR   G +G  +LNFQ LG  PW+Q R++   L
Sbjct: 376 KRPWASGLPMFNGGRSDEFARYSSLMWLR--DGNRGAQSLNFQGLGASPWLQPRIDNPLL 433

Query: 431 GNDHNQQYQAMLAAGMQ---SGDPVRQ 454
               +  YQ M AA ++   +GD ++Q
Sbjct: 434 SLKPD-TYQQMAAAALEEIRAGDHLKQ 459


>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
 gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
 gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
 gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
           Japonica Group]
 gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
           Japonica Group]
 gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
 gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
 gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
 gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 908

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/449 (79%), Positives = 383/449 (85%), Gaps = 3/449 (0%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPPQL
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  SKQPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNYFCKTLTASD 142

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQEL+A+DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTG 202

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 323 ITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 382

Query: 376 PWHPSTSS-FNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S +    D+ AS L WLR  +   G  +LNF  LGM PWMQ R++ S LG   
Sbjct: 383 PWPTGLPSLYGGKEDDLASSLMWLR-DSQNTGFQSLNFGGLGMSPWMQPRLDSSLLGLQP 441

Query: 435 NQQYQAMLAAGMQ-SGDPVRQQFMQLQQP 462
           +       AA +Q +   V    +Q QQP
Sbjct: 442 DMYQTIAAAAALQNTTKQVSPAMLQFQQP 470



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/230 (45%), Positives = 146/230 (63%), Gaps = 30/230 (13%)

Query: 607 GKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHN- 665
           G++  V  ++ ++D QN  +FGV+IDS  LL+   + S     +   S++P   S F + 
Sbjct: 684 GRECLVD-QDGSSDPQNHFLFGVNIDSQSLLMQDGIPSLHN--ENSSSTIPYSTSNFLSP 740

Query: 666 -----------SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFS 712
                      +  GC+ +S  +    N  Q+ +  P  TFVKVYKSG+VGR LDI+RFS
Sbjct: 741 SQDDYPLSQTLTTPGCLDESGYVPCSDNADQVKR--PHATFVKVYKSGTVGRLLDITRFS 798

Query: 713 SYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILS 772
           SY+ELR E+G++FG+EG+ EDPLRSGWQLVFVDRE+DVLL+GDDPW+ FV++V  IKILS
Sbjct: 799 SYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILS 858

Query: 773 PEDVQKMGEQGVESFSPSSGQRANSRGN-----------CGRDPVGSLEY 811
           P++VQ+MG+ G+E FS S+ +  NS  N            G   VGS+E+
Sbjct: 859 PQEVQQMGKPGIELFSTSARRLGNSCDNYMSRQESRSLSTGIASVGSVEF 908


>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
 gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
          Length = 895

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/469 (77%), Positives = 397/469 (84%), Gaps = 12/469 (2%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPP
Sbjct: 16  DGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPP 75

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 133
           QLICQLHNVTMHAD ET+EVYAQMTLQPLSPEEQK+ F+PIELG  SKQPTNYFCKTLTA
Sbjct: 76  QLICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKEPFLPIELGAGSKQPTNYFCKTLTA 135

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAEKVFP LDFS QPP QEL+ARDLHD EWKFRHIFRGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVFVSAKRLVAGDS++FIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GTITGISDLD  RW NSHWRSVKVGWDESTAG++QPRVSLWEIEPLTTFPMYP+ FPLRL
Sbjct: 316 GTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPMYPTAFPLRL 375

Query: 374 KRPWHPSTSSFNDNR-DETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 430
           KRPW      FN  R DE A  S L WLR   G +G  +LNFQ LG  PW+Q R++   +
Sbjct: 376 KRPWASGLPMFNGGRSDEFARYSSLMWLR--DGNRGAQSLNFQGLGASPWLQPRIDYPLM 433

Query: 431 GNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQ-SGSQNPL 475
           G   +  YQ M AA ++   +GD ++Q    L  P Q  Q  +G  +PL
Sbjct: 434 GLKPD-TYQQMAAAALEEIRAGDHLKQTSSLL--PVQQTQNLNGGLDPL 479


>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 891

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/478 (75%), Positives = 400/478 (83%), Gaps = 20/478 (4%)

Query: 2   KLSTSGLCQQ--GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           KLS S + Q    ++G+ +CLNSELWHACAGPLVSLP VG+RV+YFPQGHSEQVAA+TNK
Sbjct: 4   KLSMSEMPQPLPENDGEQRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNK 63

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP 119
           EVD+ IPNYPNLPPQLICQLHNVTMHAD ETDEVYAQMTLQPLSPEEQK+ F+PIELG  
Sbjct: 64  EVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPIELGAA 123

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           SKQPTNYFCKTLTASDTSTHGGFSVPRR+AEKVFP LDFSLQPP QELIA+DLHD EWKF
Sbjct: 124 SKQPTNYFCKTLTASDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKF 183

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIR A RP TVMPSSV
Sbjct: 184 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTVMPSSV 243

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           LSSDSMHIGLLAAAAHAAATNS FT+F+NPRASPSEF+IPL KYVK+V+HTRVSVGMRFR
Sbjct: 244 LSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYHTRVSVGMRFR 303

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           MLFETEESSVRRYMGTIT ISDLD  RW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPL
Sbjct: 304 MLFETEESSVRRYMGTITTISDLDSARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL 363

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSS----FNDNRDET---ASGLNWLRGGTGEQGLTTLNF 412
           TTFPMYP+ FPLRLKRPW     S    FN  +++     S L WL  G G++G  +LNF
Sbjct: 364 TTFPMYPTAFPLRLKRPWASGMPSMHGMFNGVKNDDFARYSSLMWL--GDGDRGAQSLNF 421

Query: 413 QSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQ-----QFMQLQQP 462
           Q +G  PW+Q R++   LG   +  YQ M AA ++   +GDP +Q     QF Q Q P
Sbjct: 422 QGVGASPWLQPRIDSPLLGLKPD-TYQQMAAAALEEIRTGDPSKQSSALLQFQQTQNP 478



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/220 (42%), Positives = 126/220 (57%), Gaps = 24/220 (10%)

Query: 585 SKYEPSQVRDFVHSMS---LPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 641
           S  + S V+ +V ++    L SS+  +D   G    ++    S+   + +  SG  LP  
Sbjct: 669 SARDSSSVQAYVANVDNHFLSSSFAFQDGMAGARGGSSSGTVSMAIPL-LRYSGEDLPPA 727

Query: 642 VSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS 701
            +  T+S         LG+SG  NS           L N+  +D  +    FVKV KSGS
Sbjct: 728 DTLATSSC--------LGESGTFNS-----------LDNMCGVDP-SQDGIFVKVCKSGS 767

Query: 702 VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 761
            GRSLDI++FSSY ELR EL  +FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ F
Sbjct: 768 PGRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEF 827

Query: 762 VSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC 801
           V++V  IKILSP++VQ+M   G    S + G R      C
Sbjct: 828 VNSVGCIKILSPQEVQRMVRGGEGLLSSAPGARMAQGDVC 867


>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
 gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
          Length = 919

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/452 (78%), Positives = 386/452 (85%), Gaps = 9/452 (1%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           ++KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPPQL
Sbjct: 24  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 83

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPL+P+E KD ++P ELG  +KQPTNYFCKTLTASD
Sbjct: 84  ICQLHNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQPTNYFCKTLTASD 143

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPP QEL+A+DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 144 TSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTG 203

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 204 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 263

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 264 AASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 323

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 324 ITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 383

Query: 376 PWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S +  +D+  A+ L WLR      G  +LNF  LGM PWMQ R++ S LG   
Sbjct: 384 PWPTGLPSLHGGKDDDLANSLMWLRDA-ANPGFQSLNFGGLGMNPWMQPRLDASLLGLQP 442

Query: 435 NQQYQAMLAAGMQSGDPVRQ----QFMQLQQP 462
           +  YQAM  A  Q  DP +Q      +Q QQP
Sbjct: 443 D-MYQAMATAAFQ--DPTKQVSSPTMLQFQQP 471



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/197 (51%), Positives = 132/197 (67%), Gaps = 17/197 (8%)

Query: 615 ENCNTDSQNSVVFGVHIDSSGLLL-----------PTTVSSFTTS--VDPGVSSMPLGDS 661
           ++ N+D QN V+FGV IDS  LL+            +T   ++TS  + P  +  PL D 
Sbjct: 700 QDVNSDPQNHVLFGVSIDSQSLLMQGGIPGLQNGNDSTAIPYSTSNFLSPSQNDFPL-DH 758

Query: 662 GFHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRFSSYNELREE 720
             ++   GC+ DS  +       DQ+  P  TFVKVYKSG+ GRSLDI+RFSSY+ELR E
Sbjct: 759 TLNSP--GCLDDSGYVPPCSDNSDQVNRPPATFVKVYKSGTYGRSLDITRFSSYHELRRE 816

Query: 721 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           LG++FG+EG+ EDPLRSGWQLVFVDRE DVLL+GDDPW+ FVS V  IKILSP++VQ+MG
Sbjct: 817 LGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFVSTVSCIKILSPQEVQQMG 876

Query: 781 EQGVESFSPSSGQRANS 797
           +QG+E  S    +R  S
Sbjct: 877 KQGLELLSSGPARRLGS 893


>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
 gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
          Length = 917

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/451 (78%), Positives = 384/451 (85%), Gaps = 8/451 (1%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPPQL
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD ++P ELG  +KQPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNYFCKTLTASD 142

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTG 202

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASPSEFVIPL+KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 323 ITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 382

Query: 376 PWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S +  +D+   S L WLR  +   G  +LNF  LGM PWMQ R + S LG   
Sbjct: 383 PWPTGLPSLHGGKDDDLTSSLMWLR-DSANPGFQSLNFGGLGMNPWMQPRFDASLLGLQP 441

Query: 435 NQQYQAMLAAGMQSGDPVRQ---QFMQLQQP 462
           +  YQ + A   Q  DP +Q     +Q QQP
Sbjct: 442 D-MYQTIAATAFQ--DPTKQVSPTILQFQQP 469


>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
          Length = 904

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/451 (78%), Positives = 384/451 (85%), Gaps = 8/451 (1%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPPQL
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD ++P ELG  +KQPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNYFCKTLTASD 142

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTG 202

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASPSEFVIPL+KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 323 ITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 382

Query: 376 PWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S +  +D+   S L WLR  +   G  +LNF  LGM PWMQ R + S LG   
Sbjct: 383 PWPTGLPSLHGGKDDDLTSSLMWLR-DSANPGFQSLNFGGLGMNPWMQPRFDASLLGLQP 441

Query: 435 NQQYQAMLAAGMQSGDPVRQ---QFMQLQQP 462
           +  YQ + A   Q  DP +Q     +Q QQP
Sbjct: 442 D-MYQTIAATAFQ--DPTKQVSPTILQFQQP 469


>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
 gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
 gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
          Length = 917

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/451 (78%), Positives = 384/451 (85%), Gaps = 8/451 (1%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPPQL
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD ++P ELG  +KQPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNYFCKTLTASD 142

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTG 202

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASPSEFVIPL+KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 323 ITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 382

Query: 376 PWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S +  +D+   S L WLR  +   G  +LNF  LGM PWMQ R + S LG   
Sbjct: 383 PWPTGLPSLHGGKDDDLTSSLMWLR-DSANPGFQSLNFGGLGMNPWMQPRFDASLLGLQP 441

Query: 435 NQQYQAMLAAGMQSGDPVRQ---QFMQLQQP 462
           +  YQ + A   Q  DP +Q     +Q QQP
Sbjct: 442 D-MYQTIAATAFQ--DPTKQVSPTILQFQQP 469


>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
          Length = 913

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/451 (78%), Positives = 385/451 (85%), Gaps = 8/451 (1%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           ++KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPPQL
Sbjct: 23  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQL 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPL+P+E KD ++P ELG  +KQPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQPTNYFCKTLTASD 142

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPP QEL+A+DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTG 202

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGI DLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 323 ITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 382

Query: 376 PWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S +  +D+  A+ L WLR  T   G  +LNF  LGM PWMQ R++ + LG   
Sbjct: 383 PWPTGLPSLHGGKDDDLANSLMWLR-DTANPGFQSLNFGGLGMSPWMQPRLDATLLGLQP 441

Query: 435 NQQYQAMLAAGMQSGDPVRQQ---FMQLQQP 462
           +  YQAM  A  Q  D  +Q     +Q QQP
Sbjct: 442 D-MYQAMATAAFQ--DATKQASPTMLQFQQP 469


>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
          Length = 533

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/533 (69%), Positives = 421/533 (78%), Gaps = 40/533 (7%)

Query: 296 MRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWE 355
           MRFRMLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWE
Sbjct: 1   MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 60

Query: 356 IEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
           IEPLTTFPMYPSLFPLRLKRPWHP + S  D+RDE ++GL WLRGG+GE GL +LNFQ+ 
Sbjct: 61  IEPLTTFPMYPSLFPLRLKRPWHPGSPSLLDSRDEASNGLMWLRGGSGEPGLPSLNFQA- 119

Query: 416 GMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQ 472
            M PWMQQR++P+ LGNDHNQ+YQAMLAAGMQ   SGDP+RQQFMQLQQPFQYLQQS   
Sbjct: 120 NMLPWMQQRLDPTMLGNDHNQRYQAMLAAGMQNLGSGDPLRQQFMQLQQPFQYLQQSSGH 179

Query: 473 NP---------------------LQLKQQ-------QHLLQQ-LNSQAEDRAQQQQQPQQ 503
           NP                     LQ + Q       +HLLQQ LN+Q  D+AQQ Q    
Sbjct: 180 NPLLQLQQQQQQQAIQQSIPHNILQAQNQISTESLPRHLLQQQLNNQPGDQAQQHQ---- 235

Query: 504 HMYHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGN 562
           H+YHD LQI+TD+L QRQQSNLPSPSFSK  +MDSS++ S + +PMQNMLGSL  EGS N
Sbjct: 236 HIYHDGLQIQTDQL-QRQQSNLPSPSFSKTEYMDSSSKFSATNTPMQNMLGSLCSEGSVN 294

Query: 563 LLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQ 622
           LL+FS AG S L +Q PQQS   KY   +V  F +S+SLP +Y  KD ++  ENC++D+Q
Sbjct: 295 LLDFSRAGQSTLTEQLPQQSWVPKYAHQEVNAFANSISLPRTYPEKDPSMEAENCSSDAQ 354

Query: 623 NSVVFGVHIDSSGLLLPTTVSSFTTS-VDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNV 681
           N  +FG +IDSSGLLLPTTV  ++TS +D  VSSMPLGDSGF NS+YGC+QDSSELL N 
Sbjct: 355 NPTLFGANIDSSGLLLPTTVPRYSTSSIDADVSSMPLGDSGFQNSLYGCVQDSSELLSNA 414

Query: 682 GQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           GQ+D  TP+ TFVKVYKSGSVGRSLDISRFSSY+ELR EL QMFGIEGK E+P RSGWQL
Sbjct: 415 GQMDPPTPSGTFVKVYKSGSVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQL 474

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 794
           VFVDRENDVLLLGDDPWE FV+NVWYIKILSPEDV K+GEQGVE   P++  R
Sbjct: 475 VFVDRENDVLLLGDDPWELFVNNVWYIKILSPEDVLKLGEQGVEPSGPNAVHR 527


>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
 gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
          Length = 884

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/472 (76%), Positives = 394/472 (83%), Gaps = 13/472 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+ S++G   Q HE + + LNSELWHACAGPLVSLP VG+R VYFPQGHSEQVAA+TNKE
Sbjct: 1   MRHSSAGFNPQTHEVEKRVLNSELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           V++ IP+YP+LP QLICQLHNVTMHADVETDEVYAQMTLQPLSP+EQK  ++P ++G PS
Sbjct: 61  VNAQIPSYPSLPAQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKAAYLPADMGTPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS  PPAQELIARDLHD EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIPL KY+KAV++TRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYLKAVYYTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           +FETEESSVRRYMGTITGISDLD VRW NS WRSVKVGWDEST GERQPRVSLWEIEPLT
Sbjct: 301 MFETEESSVRRYMGTITGISDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFN-----DNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
           TFP YPS FPLRLKRPW P   SF+     D+       L WLRG  G+ G  +LNFQ  
Sbjct: 361 TFPTYPSPFPLRLKRPWPPGLPSFHGLGIKDDDLGKNPSLMWLRGD-GDCGYQSLNFQGT 419

Query: 416 GMFPWMQQRVEPSFLGNDHNQQYQAMLAAG---MQSGDPVRQ---QFMQLQQ 461
           G+ PW+Q RV+ S LG   N  YQ M  A    M++ DP +     F+Q QQ
Sbjct: 420 GVSPWVQPRVDASMLGL-QNDVYQTMATAAFQEMRTLDPSKSSAASFLQFQQ 470


>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
          Length = 816

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/824 (52%), Positives = 511/824 (62%), Gaps = 104/824 (12%)

Query: 84  MHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFS 143
           MHAD ETDEVYAQMTLQPLS +E K+ ++P ELG PS+QPTNYFCKTLTASDTSTHGGFS
Sbjct: 1   MHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFS 60

Query: 144 VPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAK 203
           VPRRAAEKVFP LDFS+QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTTGWSVFVSAK
Sbjct: 61  VPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 120

Query: 204 RLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCF 263
           RLVAGD+VLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAAHAAAT S F
Sbjct: 121 RLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRF 180

Query: 264 TVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLD 323
           T+FFNPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETE             +    
Sbjct: 181 TIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETENQVFVATWAQSLALVTWI 240

Query: 324 PVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSS 383
           PVRW NSHWRSVKVGWDESTAGERQP+VSLWEIEPLTTFPMYPS FPLRLKRPW     S
Sbjct: 241 PVRWQNSHWRSVKVGWDESTAGERQPKVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPS 300

Query: 384 F--NDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAM 441
           F   D+     S   WLRG   ++G+  LNFQ  G+ PWMQ R++PS +G   +  YQ M
Sbjct: 301 FGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVSPWMQPRLDPSMMGM-QSDMYQVM 359

Query: 442 LAAGMQSGDPVR------QQFMQLQQPF------------QYLQQSGSQNP-LQLKQQQH 482
             A +Q    +          +Q QQP             Q L QS  Q   LQ  Q+  
Sbjct: 360 ATAALQEMRAIDYSKISPASVLQFQQPQSLPCQSSTLMQPQMLHQSQPQQAFLQSVQENQ 419

Query: 483 LLQQLNSQAEDRAQQQQQPQQHMYH---------------DALQIRT-----DELLQRQQ 522
              Q  SQ +    Q Q PQQ   +               D  QI +      +     Q
Sbjct: 420 QHSQPQSQTQSHHLQPQLPQQSFNNHSQQHQQQPRQNQPLDHQQIPSSIPAISQFASCSQ 479

Query: 523 SNLPS----------PSFSKANFMDSSTEISVSISPMQNMLGSLPEGS-GNLLNF----- 566
           S  PS          PSFS +N    +   S ++SP+ ++ GS  +     LLN      
Sbjct: 480 SQSPSLQTVPSLCQQPSFSDSN---GNPATSPTVSPLHSLAGSFVQDDFSQLLNLQRAHS 536

Query: 567 ---SGAGPSMLRQQFPQQSLGSKYEPSQVRDF--------VHSMSLPSSYNGKDAAVGTE 615
              S   PS      P  +  S+Y   QV            ++++LP  + G++  +   
Sbjct: 537 VIPSAGWPSKRAAIDPLCTGASQYFLPQVEMLGTQQSSISQNTVALP-PFPGRECPIDDR 595

Query: 616 NCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM-------- 667
             ++D QN V+FG +IDSS LL+   +S+     +  VS+     S + ++         
Sbjct: 596 EESSDPQNHVLFGANIDSSSLLMQNGMSTLRGVCNDSVSTTLPFSSNYMSTAGTNFPVNP 655

Query: 668 ----YGCMQDSSELLH---NVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREE 720
                 C+ D S LL    NVGQ++   P  TFVKV+KSG+  RSLDI++F+SY ELR E
Sbjct: 656 TMTSSNCI-DESGLLQSHENVGQVN--PPNGTFVKVHKSGTYSRSLDITKFNSYPELRSE 712

Query: 721 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           L +MFG+EG+ EDPLRSGWQLVFVDRENDVLLLGD PW  FV++VW IKILSPE+VQ MG
Sbjct: 713 LARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQDMG 772

Query: 781 EQGVE------------SFSPSSGQRANSRG-NCGRDPVGSLEY 811
           ++G+E            S     G R +SR    G   VG L+Y
Sbjct: 773 KRGLELLNSVPIQRLSNSTCDDYGSRQDSRNLISGIASVGPLDY 816


>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
 gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
 gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
 gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
          Length = 899

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/496 (74%), Positives = 400/496 (80%), Gaps = 29/496 (5%)

Query: 13  HEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 72
           ++G+ +CLNSELWHACAGPLVSLP V +RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLP
Sbjct: 18  NDGEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLP 77

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 132
           PQLICQLHNVTMHAD ETDEVYAQMTLQPLSPEEQK+ F+P+ELG  SKQPTNYFCKTLT
Sbjct: 78  PQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLT 137

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 197

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIRRA R  TVMPSSVLSSDSMHIGLLAA
Sbjct: 198 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAA 257

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRY
Sbjct: 258 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 317

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           MGTIT ISDLD VRW NSHWRSVKVGWDEST G++QPRVSLWEIEPLTTFPMYPS FPLR
Sbjct: 318 MGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLR 377

Query: 373 LKRPWH---PSTSSFN-DNRDETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVE 426
           LKRPW    P    FN    D+ A  S L WLR G   +G  +LNFQ  G+ PW+Q R++
Sbjct: 378 LKRPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGN--RGTQSLNFQGHGVSPWLQPRID 435

Query: 427 PSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSG------------- 470
              LG   +  YQ M AA ++    GDP +Q    LQ    +   SG             
Sbjct: 436 SPLLGLKPD-TYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQV 494

Query: 471 ----SQNPLQLKQQQH 482
                Q+PLQ+ QQ H
Sbjct: 495 QFQPQQSPLQVVQQGH 510



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 24/201 (11%)

Query: 614 TENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPL-------GDSGFHNS 666
            ++C  D++N ++      SS   L   ++S  T  +    +M +        D    N+
Sbjct: 686 VQDCRADAENRLL------SSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENT 739

Query: 667 MY--GCMQDSSEL--LHNVGQIDQLTPTR--TFVKVYKSGSVGRSLDISRFSSYNELREE 720
           +    C+ +S     L+N+     + P++  TFVKVYKSGS+GRSLDISRFSSY ELR E
Sbjct: 740 LATSNCLGESGTFNPLNNIS----VNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSE 795

Query: 721 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           L ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ F ++VW IKILSP++VQ++ 
Sbjct: 796 LERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQL- 854

Query: 781 EQGVESFSPSSGQRANSRGNC 801
            +G +    S G R      C
Sbjct: 855 VRGGDGLLSSPGARMQQSNAC 875


>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
          Length = 899

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/496 (74%), Positives = 400/496 (80%), Gaps = 29/496 (5%)

Query: 13  HEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 72
           ++G+ +CLNSELWHACAGPLVSLP V +RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLP
Sbjct: 18  NDGEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLP 77

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 132
           PQLICQLHNVTMHAD ETDEVYAQMTLQPLSPEEQK+ F+P+ELG  SKQPTNYFCKTLT
Sbjct: 78  PQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLT 137

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 197

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIRRA R  TVMPSSVLSSDSMHIGLLAA
Sbjct: 198 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAA 257

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRY
Sbjct: 258 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 317

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           MGTIT ISDLD VRW NSHWRSVKVGWDEST G++QPRVSLWEIEPLTTFPMYPS FPLR
Sbjct: 318 MGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLR 377

Query: 373 LKRPWH---PSTSSFN-DNRDETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVE 426
           LKRPW    P    FN    D+ A  S L WLR G   +G  +LNFQ  G+ PW+Q R++
Sbjct: 378 LKRPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGN--RGTQSLNFQGHGVSPWLQPRID 435

Query: 427 PSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSG------------- 470
              LG   +  YQ M AA ++    GDP +Q    LQ    +   SG             
Sbjct: 436 SPLLGLKPD-TYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQV 494

Query: 471 ----SQNPLQLKQQQH 482
                Q+PLQ+ QQ H
Sbjct: 495 QFQPQQSPLQVVQQGH 510



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 24/201 (11%)

Query: 614 TENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPL-------GDSGFHNS 666
            ++C  D++N ++      SS   L   ++S  T  +    +M +        D    N+
Sbjct: 686 VQDCRADAENRLL------SSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENT 739

Query: 667 MY--GCMQDSSEL--LHNVGQIDQLTPTR--TFVKVYKSGSVGRSLDISRFSSYNELREE 720
           +    C+ +S     L+N+     + P++  TFVKVYKSGS+GRSLDISRFSSY ELR E
Sbjct: 740 LATSNCLGESGTFNPLNNIS----VNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSE 795

Query: 721 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           L ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ F ++VW IKILSP++VQ++ 
Sbjct: 796 LERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQL- 854

Query: 781 EQGVESFSPSSGQRANSRGNC 801
            +G +    S G R      C
Sbjct: 855 VRGGDGLLSSPGARMQQSNAC 875


>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
          Length = 880

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/494 (74%), Positives = 398/494 (80%), Gaps = 29/494 (5%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ +CLNSELWHACAGPLVSLP V +RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPPQ
Sbjct: 1   GEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 60

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           LICQLHNVTMHAD ETDEVYAQMTLQPLSPEEQK+ F+P+ELG  SKQPTNYFCKTLTAS
Sbjct: 61  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTAS 120

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 121 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 180

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIRRA R  TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 181 GWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAA 240

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 241 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 300

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TIT ISDLD VRW NSHWRSVKVGWDEST G++QPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 301 TITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLRLK 360

Query: 375 RPWH---PSTSSFN-DNRDETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPS 428
           RPW    P    FN    D+ A  S L WLR G   +G  +LNFQ  G+ PW+Q R++  
Sbjct: 361 RPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGN--RGTQSLNFQGHGVSPWLQPRIDSP 418

Query: 429 FLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSG--------------- 470
            LG   +  YQ M AA ++    GDP +Q    LQ    +   SG               
Sbjct: 419 LLGLKPD-TYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQVQF 477

Query: 471 --SQNPLQLKQQQH 482
              Q+PLQ+ QQ H
Sbjct: 478 QPQQSPLQVVQQGH 491



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 24/201 (11%)

Query: 614 TENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPL-------GDSGFHNS 666
            ++C  D++N ++      SS   L   ++S  T  +    +M +        D    N+
Sbjct: 667 VQDCRADAENRLL------SSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENT 720

Query: 667 MY--GCMQDSSEL--LHNVGQIDQLTPTR--TFVKVYKSGSVGRSLDISRFSSYNELREE 720
           +    C+ +S     L+N+     + P++  TFVKVYKSGS+GRSLDISRFSSY ELR E
Sbjct: 721 LATSNCLGESGTFNPLNNIS----VNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSE 776

Query: 721 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           L ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ F ++VW IKILSP++VQ++ 
Sbjct: 777 LERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQL- 835

Query: 781 EQGVESFSPSSGQRANSRGNC 801
            +G +    S G R      C
Sbjct: 836 VRGGDGLLSSPGARMQQSNAC 856


>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 781

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/470 (77%), Positives = 394/470 (83%), Gaps = 14/470 (2%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPP
Sbjct: 16  DGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPP 75

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 133
           QLICQLHNVTMHAD ET EVYAQMTLQPLSPEEQK+ F+PIELG  S QPTNYFCKTLTA
Sbjct: 76  QLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTNYFCKTLTA 135

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAEKVFP LDFS  PP QEL+ARDLHD EWKFRHIFRGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVFVSAKRLVAGDS++FIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GTIT ISDLD  RW NSHWRSVKVGWDESTAG++QPRVSLWEIEPL  FPMYP+ FPLRL
Sbjct: 316 GTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFPLRL 375

Query: 374 KRPWHPSTSSFNDNR-DETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 430
           KRPW      FN  R DE A  S L WLR   G +G  +LNFQ LG  PW+Q R++   L
Sbjct: 376 KRPWASGLPMFNGGRSDEFARYSSLMWLR--DGNRGAQSLNFQGLGASPWLQPRIDYPLL 433

Query: 431 GNDHNQQYQAMLAAGMQ---SGDPVRQ--QFMQLQQPFQYLQQSGSQNPL 475
           G   +  YQ M AA ++   +GD ++Q    + +QQP Q L  SG  +PL
Sbjct: 434 GLKLD-TYQQMAAAALEEIRAGDHLKQISSLLPVQQP-QNL--SGGLDPL 479


>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
 gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
          Length = 911

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/457 (77%), Positives = 379/457 (82%), Gaps = 3/457 (0%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           ++KCLNSELWHACAGPLVSLP VG+RVVYFPQGH EQVAA+TNKE+++ IPNYP+LPPQL
Sbjct: 23  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQL 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  SKQPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNYFCKTLTASD 142

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFRGQPKRHLLTTG 202

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASP EFVIP+ KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLDPVRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYPS F L LKR
Sbjct: 323 ITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSPFALGLKR 382

Query: 376 PWHPSTSSFNDNRDE-TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S    RD+   S L WLR      G  +LNF  LG  PWMQ R++ S LG   
Sbjct: 383 PWPTGLPSLYGGRDDGLTSSLMWLR-DRANPGFQSLNFSGLGTSPWMQPRLDNSLLGLQS 441

Query: 435 NQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSG 470
           +       AA +QS    V    MQ QQP   + +S 
Sbjct: 442 DMYQTIAAAAALQSTTKQVSPSVMQFQQPQNIVDRSA 478


>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
          Length = 925

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/451 (77%), Positives = 382/451 (84%), Gaps = 8/451 (1%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           ++KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IP+YPNLPPQL
Sbjct: 37  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPSYPNLPPQL 96

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTM AD ET+EVYAQMTLQPL+P+E KD ++P ELG+ SKQPTNYFCKTLTASD
Sbjct: 97  ICQLHNVTMQADAETEEVYAQMTLQPLNPQELKDPYLPAELGLVSKQPTNYFCKTLTASD 156

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPP QEL+A DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 157 TSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMATDLHGNEWKFRHIFRGQPKRHLLTTG 216

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 217 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 276

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 277 AASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 336

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLD VRW NSHWRSVKVGWDESTAG+RQPRVSLWEIEPLTTFP Y S FPLRLKR
Sbjct: 337 ITGISDLDSVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPTYTSPFPLRLKR 396

Query: 376 PWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           PW     S +  +D+  A+ L WLR  T   G  +LNF  LGM  WMQ R++ S LG   
Sbjct: 397 PWPTGLPSLHGGKDDDLANSLMWLRDTTNP-GFQSLNFGGLGMNSWMQPRLDTSLLGLQP 455

Query: 435 NQQYQAMLAAGMQSGDPVRQQ---FMQLQQP 462
           +  YQAM     Q  DP +Q     +Q QQP
Sbjct: 456 D-MYQAMATGAFQ--DPTKQASPTMLQFQQP 483



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/194 (51%), Positives = 130/194 (67%), Gaps = 17/194 (8%)

Query: 615 ENCNTDSQNSVVFGVHIDSSGLLLP-----------TTVSSFTTS--VDPGVSSMPLGDS 661
           ++ N D QN ++FGV IDS  LL+            +T   ++TS  + P  +  PL D 
Sbjct: 705 QDANPDPQNHLLFGVSIDSQSLLMEGGIHGLQNGNDSTAIPYSTSNFLSPSQNDFPL-DH 763

Query: 662 GFHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRFSSYNELREE 720
             ++S  GC+ DS  +       DQ+  P  TFVKVYKSG+ GRSLDI+RFSSY+ELR E
Sbjct: 764 TLNSS--GCLDDSGYVPPCSDNSDQVNRPPATFVKVYKSGTYGRSLDITRFSSYHELRRE 821

Query: 721 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           LG++FG+EG+ EDPLRSGWQLVFVDRE DVLL+GDDPW+ F S V  IKILSP++VQ+MG
Sbjct: 822 LGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFASTVSCIKILSPQEVQQMG 881

Query: 781 EQGVESFSPSSGQR 794
           +QG+E  S +   R
Sbjct: 882 KQGLELLSSAPAAR 895


>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
 gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
          Length = 881

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/467 (76%), Positives = 387/467 (82%), Gaps = 9/467 (1%)

Query: 1   MKLSTSGLCQQGH--EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN 58
           M+LS++G   Q     G+ K LNSELWHACAGPLVSLP VGTRVVYFPQGHSEQVAA+TN
Sbjct: 1   MRLSSAGFNPQPEMAAGEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTN 60

Query: 59  KEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELG 117
           KE++ HIP+YP LPPQLICQLHNVTM ADVETDEVYAQMTLQPL+P+EQKD   +P ELG
Sbjct: 61  KEINGHIPSYPGLPPQLICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELG 120

Query: 118 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
             SKQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD+S QPP QELI +DLH  EW
Sbjct: 121 TLSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEW 180

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS 237
           KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FIWNE NQLLLGIRRA RP TV+PS
Sbjct: 181 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPS 240

Query: 238 SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
           SVLSSDSMHIGLLAAAAHAAATNS FT+FFNPRA PSEFVIPL KY KAV+HTRVSVGMR
Sbjct: 241 SVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMR 300

Query: 298 FRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           F+MLFETEESS+RRYMGTITGI DLDPVRW NSHW+SVKVGWDESTAGERQPRVSLWEIE
Sbjct: 301 FQMLFETEESSIRRYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIE 360

Query: 358 PLTTFPMYPSLFPLRLKRPWHPSTSSFN--DNRDETA-SGLNWLRGGTGEQGLTTLNFQS 414
           PLTTFPMYPS F LRLKRPW P   SF    N D T  S L WL GG G+QG+ +LNFQ 
Sbjct: 361 PLTTFPMYPSPFSLRLKRPWPPGLPSFPGLSNGDMTMNSQLPWLHGGMGDQGIQSLNFQG 420

Query: 415 LGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQ 461
            G+ P+MQ R + S LG   +   QAM  A + S     Q  MQ Q 
Sbjct: 421 FGVTPFMQPRFDASMLGLQPD-ILQAM--AALDSSKLANQPLMQFQH 464


>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
 gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
          Length = 524

 Score =  701 bits (1808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/503 (73%), Positives = 402/503 (79%), Gaps = 25/503 (4%)

Query: 1   MKLSTSGLCQQGHE-GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           M++S+SG   Q  E G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHS QVAA+TNK
Sbjct: 1   MRVSSSGFNPQPEEAGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSVQVAASTNK 60

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELGI 118
           EVD+HIPNYP LPPQLICQLHN+TMHADVETDEVYAQMTLQPLSP+EQKD   +P ELGI
Sbjct: 61  EVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGI 120

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           PSK PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LD+S QPP QELIA+DLH  EWK
Sbjct: 121 PSKLPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWK 180

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
            RHIFRGQPKRHLLTTGWSVFVSAKRLVAGD+V+FIWNE NQLLLGIRRA RP T+MP S
Sbjct: 181 LRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTLMPFS 240

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           VLSSDSMHIGLLAAAAHA ATN+ FT+F+NPRASPSEFVIPL KY KAV+HTR+SVGMRF
Sbjct: 241 VLSSDSMHIGLLAAAAHATATNTRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRF 300

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RMLFETEESSVRRYMGTITGISDLDPV W NSHWRSVKVGWDESTAGERQPRVSLWEIEP
Sbjct: 301 RMLFETEESSVRRYMGTITGISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 360

Query: 359 LTTFPMYPSLFPLRLKRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
           LTTFPMYPS F LRLKRPW    PS   F +      S L+WLRG  G+QG+ +LNFQ  
Sbjct: 361 LTTFPMYPSPFSLRLKRPWPSGLPSLPGFPNVGLTMNSPLSWLRGDMGDQGMQSLNFQGF 420

Query: 416 GMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVR---QQFMQLQQP---------- 462
           G  P+MQ R++ S LG       Q  +   M + DP +   Q  MQ Q            
Sbjct: 421 GATPFMQPRMDASMLG------LQPDILQTMTALDPSKLANQSLMQFQHSIPNSSAPLSQ 474

Query: 463 FQYLQQSGSQ-NPLQLKQQQHLL 484
            Q LQ S SQ N +Q   + HL+
Sbjct: 475 IQMLQPSHSQHNLIQGFSENHLI 497


>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
          Length = 868

 Score =  700 bits (1807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/451 (78%), Positives = 379/451 (84%), Gaps = 7/451 (1%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ K LNSELWHACAGPLVSLP VGTRVVYFPQGHSEQVAA+TNKE++ HIP+YP LPPQ
Sbjct: 4   GEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQ 63

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELGIPSKQPTNYFCKTLTA 133
           LICQLHNVTM ADVETDEVYAQMTLQPL+P+EQKD   +P ELG  SKQP+NYFCKTLTA
Sbjct: 64  LICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELGTLSKQPSNYFCKTLTA 123

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAEKVFP LD+S QPP QELI +DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 124 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLT 183

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVFVSAKRLVAGDSV+FIWNE NQLLLGIRRA RP TV+PSSVLSSDSMHIGLLAAA
Sbjct: 184 TGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAA 243

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAAATNS FT+FFNPRA PSEFVIPL KY KAV+HTRVSVGMRFRMLFETEESS+RRYM
Sbjct: 244 AHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSIRRYM 303

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GTITGI DLDPVRW NSHW+SVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS F LRL
Sbjct: 304 GTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFSLRL 363

Query: 374 KRPWHPSTSSFN--DNRDETA-SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 430
           KRPW P   SF    N D T  S L WL GG G+QG+ +LNFQ  G+ P+MQ R + S L
Sbjct: 364 KRPWPPGLPSFPGLSNGDMTMNSQLPWLHGGMGDQGIQSLNFQGFGVTPFMQPRFDASML 423

Query: 431 GNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQ 461
           G   +   QAM  A + S     Q  MQ Q 
Sbjct: 424 GLQPD-ILQAM--AALDSSKLANQPLMQFQH 451


>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 884

 Score =  691 bits (1784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/458 (75%), Positives = 375/458 (81%), Gaps = 27/458 (5%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MKLS+SG      EG+ + L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN+E
Sbjct: 1   MKLSSSGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD HIPNYP+LPPQLICQLHNVTMHAD ETDEVYAQMTLQPL+P+EQK+ ++P ELG PS
Sbjct: 61  VDGHIPNYPSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAELGTPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCK LTASDTSTHGGFSVPRRAAEKVFP LDFS QPP QELIARDLH  EWKFR
Sbjct: 121 KQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFR 180

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP  VMPSSVL
Sbjct: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVL 240

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMH+GLLAAAAHAAATNS FT+F+NPRASPSEFVIP  KYVKAV+HTRVSVGMRFRM
Sbjct: 241 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFETEESSVRRYMGTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
Sbjct: 301 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 420
           TFPMYPS FPLRLKRPW P   SF+  +D+                         G    
Sbjct: 361 TFPMYPSPFPLRLKRPWPPGLPSFHGLKDD-----------------------DFGTNXX 397

Query: 421 MQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQ 455
               ++PS + N  +  YQAM AA +Q   + DP +Q 
Sbjct: 398 XXXXLDPSMV-NYQSDMYQAMAAAALQDMWTSDPSKQH 434


>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
          Length = 396

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/395 (85%), Positives = 356/395 (90%), Gaps = 3/395 (0%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPPQL
Sbjct: 2   EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 61

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  SKQPTNYFCKTLTASD
Sbjct: 62  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNYFCKTLTASD 121

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQEL+A+DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 122 TSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTG 181

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 182 WSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 241

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 242 AASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 301

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           ITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 302 ITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 361

Query: 376 PWHPSTSS-FNDNRDETASGLNWLRG--GTGEQGL 407
           PW     S +    D+ AS L WLR    TG Q L
Sbjct: 362 PWPTGLPSLYGGKEDDLASSLMWLRDSQNTGFQSL 396


>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
 gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
          Length = 372

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/371 (89%), Positives = 348/371 (93%), Gaps = 1/371 (0%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           D KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+LPPQL
Sbjct: 1   DKKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQL 60

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGIPSKQPTNYFCKTLTAS 134
           ICQLHNVTMHADVETDEVYAQMTLQPLS ++QKD ++ P ELG  SKQPTNYFCKTLTAS
Sbjct: 61  ICQLHNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQPTNYFCKTLTAS 120

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAEKVFP+LD+S  PPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 121 DTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 180

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP T MPSSVLSSDSMHIGLLAAAA
Sbjct: 181 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAA 240

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAATNS FT+F+NPRASPSEFVIPL KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 241 HAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 300

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FP+RLK
Sbjct: 301 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSAFPMRLK 360

Query: 375 RPWHPSTSSFN 385
           RPW     SF+
Sbjct: 361 RPWPSGLPSFH 371


>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
 gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
          Length = 372

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/371 (89%), Positives = 346/371 (93%), Gaps = 1/371 (0%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           DNKCLNSELWHACAGPLVSLP VG+R VYFPQGHSEQVAA+TNKEVD+HIPNYP+LP QL
Sbjct: 1   DNKCLNSELWHACAGPLVSLPHVGSRAVYFPQGHSEQVAASTNKEVDAHIPNYPSLPAQL 60

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGIPSKQPTNYFCKTLTAS 134
           ICQLHNVTMHADVETDEVYAQMTLQPLSPE++KD ++ P ELG  SKQP+NYFCKTLTAS
Sbjct: 61  ICQLHNVTMHADVETDEVYAQMTLQPLSPEDKKDAYLLPAELGTASKQPSNYFCKTLTAS 120

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAEKVFP LDFS  PPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 121 DTSTHGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 180

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 181 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 240

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAATNS FT+F+NPR SPSEFVIPL KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 241 HAAATNSRFTIFYNPRTSPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 300

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TITGISDLDP RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FP+RLK
Sbjct: 301 TITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSAFPMRLK 360

Query: 375 RPWHPSTSSFN 385
           RPW     SF+
Sbjct: 361 RPWPSGLPSFH 371


>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
 gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
          Length = 821

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/460 (73%), Positives = 377/460 (81%), Gaps = 7/460 (1%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLIC 85

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 145

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR--GQPKRHLLTTG 195
           THGGFSVPRRAAE+VFP L  S        +   +  +      I     QPKRHLLTTG
Sbjct: 146 THGGFSVPRRAAERVFPPLVISHSSLQHRSLLHGIFMMSSGNSGISSEASQPKRHLLTTG 205

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 206 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 265

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AAATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 266 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 325

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           IT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K 
Sbjct: 326 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKH 385

Query: 376 PWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHN 435
           PW+   ++ +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L NDH+
Sbjct: 386 PWYSGVAALHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSNDHD 441

Query: 436 QQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP 474
           Q    + AA        ++QQF+ LQQP Q  Q+  + NP
Sbjct: 442 QYQAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEQCNLNP 481


>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
          Length = 924

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/476 (71%), Positives = 379/476 (79%), Gaps = 11/476 (2%)

Query: 10  QQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP 69
           Q   EG+ + LNSELWHACAGPLV LP VG+ VVYFPQGHSEQVAA+TNKEVD+HIPNYP
Sbjct: 7   QHLQEGERRSLNSELWHACAGPLVLLPVVGSHVVYFPQGHSEQVAASTNKEVDAHIPNYP 66

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCK 129
           NLPPQLICQLHNVT+ ADVETDEVYAQMTLQPL+P+E K++++   LG PS QPTNYFCK
Sbjct: 67  NLPPQLICQLHNVTLQADVETDEVYAQMTLQPLNPQEPKESYLAPALGTPSGQPTNYFCK 126

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFS+PRRAAEKVFP LDF+ QPP QELIARDLHD EWKFRHI+RGQPKR
Sbjct: 127 TLTASDTSTHGGFSIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPKR 186

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWSVFVSAKRLVAGDSVLFI N+K QLLLGIRRA R   VMPSSVLSSDSMHIG+
Sbjct: 187 HLLTTGWSVFVSAKRLVAGDSVLFIRNDKGQLLLGIRRANRAQMVMPSSVLSSDSMHIGV 246

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAA+TN  FT+F+NPRASPSEFV+PL K+ KAV+HTRVS+GMRFRMLFETEES+V
Sbjct: 247 LAAAAHAASTNCRFTIFYNPRASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEESTV 306

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTITGI DLDP RW NS WRS+KVGWDESTAGERQPRVSLWEIEPLTTF MYP  +
Sbjct: 307 RRYMGTITGIGDLDPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIEPLTTFLMYPPPY 366

Query: 370 PLRLKRPW---HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW--MQQR 424
           P  LKRPW       S + ++       L  +R   GE  L  L+FQSLGM PW  MQQR
Sbjct: 367 PPGLKRPWSHIQGIPSLYGNDDGNIRMSLMSMRDN-GEHSLQALSFQSLGMDPWMQMQQR 425

Query: 425 VEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQ-QSGSQNPLQ 476
           ++ S L    +  YQ M    +Q   S DP +Q   Q +QP    Q Q   Q PLQ
Sbjct: 426 ID-SCLTGIQSDVYQGMPTVSVQETRSVDPSKQLNYQQKQPVLSEQLQCRPQLPLQ 480



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/223 (44%), Positives = 141/223 (63%), Gaps = 20/223 (8%)

Query: 581 QSLGSKYEP-SQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLP 639
           Q + S+ EP +Q    V SM L + +  ++ +   E   +DSQ++++FGV+ID+  L++ 
Sbjct: 666 QRVLSQTEPLAQSNIPVQSMPL-TQFALRNCSSDQEGVQSDSQSNLLFGVNIDTPSLVIT 724

Query: 640 TTVSSFTTSVDPGV---SSMPLGD----------SGF-HNSMYGC---MQDSSELLHNVG 682
            TVS+ + ++  G    SS  + D          SGF  NS  G    + ++    H   
Sbjct: 725 DTVSN-SRNIGNGAYVGSSFSVTDLLNVPSCAPTSGFPMNSSIGASGGLDENGLSQHGAN 783

Query: 683 QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 742
                 PTRTF KVYK GSVGRSLD++RF+ Y ELR EL +MFG+EG+ EDP RSGWQLV
Sbjct: 784 YAHINPPTRTFTKVYKLGSVGRSLDVTRFNGYQELRAELDRMFGLEGQLEDPQRSGWQLV 843

Query: 743 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           FVD+E DVLLLGDDPWE FV++V +IKILSP +V +M ++G++
Sbjct: 844 FVDKEKDVLLLGDDPWEEFVNSVRFIKILSPPEVMQMSQEGIQ 886


>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
          Length = 870

 Score =  629 bits (1621), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 340/517 (65%), Positives = 382/517 (73%), Gaps = 35/517 (6%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           EG+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+E+D  IPNY +LPP
Sbjct: 12  EGERRTLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRELDVQIPNYTSLPP 71

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 133
           QLIC LHNVTM+ADVETDEVYAQMTLQPLS +EQK+++   +LG PSKQP+NYFC TLTA
Sbjct: 72  QLICHLHNVTMNADVETDEVYAQMTLQPLSLQEQKESYFVPDLGSPSKQPSNYFCXTLTA 131

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFS+PRRAAEKVFP LDF+ QPPAQEL ARDLH+ EWKFRHI+RGQPKRHLLT
Sbjct: 132 SDTSTHGGFSIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWKFRHIYRGQPKRHLLT 191

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVFVSAKRLVAGDSVLFI N+  QLLLGIRRA + PTVMPSSVLSSDSMHIG+LAAA
Sbjct: 192 TGWSVFVSAKRLVAGDSVLFIRNDSGQLLLGIRRANKSPTVMPSSVLSSDSMHIGVLAAA 251

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAAATNS F +F+NPRASPSEFVIP +KY KAV+HT+VSVG+RFRMLFETEES VRRYM
Sbjct: 252 AHAAATNSPFNIFYNPRASPSEFVIPFSKYEKAVYHTQVSVGLRFRMLFETEESGVRRYM 311

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GTITGI D+DPVRW NS WRS+KVGWDESTAGER PRVSLWEIEPLTTF MYP  + L L
Sbjct: 312 GTITGIGDMDPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIEPLTTFLMYPPPYSLNL 371

Query: 374 KRPWH--PSTSSFNDNRDETASGLN---WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPS 428
           KRPW      SSF   ++E  S      W+ G  GE+    LN Q  GM     Q + P 
Sbjct: 372 KRPWTHLQGISSFPGIKEEDVSMKKPFLWMGGENGERIFHGLNSQ--GMLDQCMQ-MPPK 428

Query: 429 F---LGNDHNQQYQAMLAAGMQS------GDPV----------RQQFMQLQQPFQYLQ-- 467
           +   +   H   YQ M    +Q         P+           QQ   + QP    Q  
Sbjct: 429 YDSCITGSHPDIYQMMATQALQETRSQNDSKPLVQFPSQHSIASQQLQSMAQPSLQSQIL 488

Query: 468 ------QSGSQNPLQLKQQQHLLQQLNSQAEDRAQQQ 498
                 QS SQN  Q  Q Q  LQQ NS    + QQ+
Sbjct: 489 QQLQRPQSLSQNQAQRLQPQPSLQQPNSVYMQQPQQK 525



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/118 (63%), Positives = 90/118 (76%), Gaps = 3/118 (2%)

Query: 680 NVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 739
           N+ QI    PTRTF KVYK GS+GRS+D++RFS Y ELR EL +MF +EG+ ED  RSGW
Sbjct: 729 NLSQIH--LPTRTFTKVYKLGSIGRSIDVTRFSGYPELRCELARMFNLEGQLED-CRSGW 785

Query: 740 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 797
           QLVFVD+ENDVLLLGDDPWE FV NV YIKILSP +VQ+M ++G+E  +    QR  S
Sbjct: 786 QLVFVDKENDVLLLGDDPWEEFVINVRYIKILSPPEVQQMTQEGMELLNSIPLQRQTS 843


>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
 gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
          Length = 835

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 389/821 (47%), Positives = 499/821 (60%), Gaps = 115/821 (14%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           GD K +N  LW  CAGPL++LP +G++VVYFPQGHSEQV A+T+KE D  +P+YPNLPPQ
Sbjct: 10  GDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQ 69

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ-KDTFVPIELGIPSKQPTNYFCKTLTA 133
           L C LHN+T+HAD E DEV+AQMTLQP S     KD F+  + GI +KQ    F KTLTA
Sbjct: 70  LFCILHNITLHADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTA 129

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFS+PRRAAEKVFP LDF+  PPAQEL+ARDLH+ EW FRHI+RGQP+RHLLT
Sbjct: 130 SDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLT 189

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVFVSAKRL AGD+VLF+ +E+ Q +LGIRRA R  T +P+S+LSSDSM IG+LAAA
Sbjct: 190 TGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAA 249

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAA+TNS FT+F+NPRASPSEFVIPL KY KA+   +++VGMRFRM  ETE+SS RRYM
Sbjct: 250 AHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYM 309

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 372
           GTITGI DLDPVRW NSHWRS+KVGWDESTAG++Q RVS WEIEPLT  F +  S F LR
Sbjct: 310 GTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLCNSSFLLR 369

Query: 373 LKRPWHPS------TSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL-GMFPWMQQR- 424
            KRP   S      + S  +   +  +   W RG  G+  +  +NF  L GM  W+Q + 
Sbjct: 370 SKRPRAFSGVLNTLSLSLAEEELQMKAPSIWARGEEGKFSMQNMNFPGLSGMDHWLQLQQ 429

Query: 425 --------------VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSG 470
                         ++P +        Y ++L   M++ D   +Q MQ  Q FQ +Q + 
Sbjct: 430 KAGGSAAVTPPPPVIQPGY--------YSSILQE-MRTIDATPKQLMQSPQAFQPMQFNQ 480

Query: 471 SQNPL------QLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSN 524
           S  PL      Q +Q  HL   +   A   A             AL+   D+ + R  ++
Sbjct: 481 SMPPLLQQQQQQAQQMMHLPPNVPEAASMHAP--------YIPAALKTPPDQEVNRNSNS 532

Query: 525 LPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLG 584
            P        F+    E  VS + M  + GS P              S+ +QQ  QQ  G
Sbjct: 533 YPP-------FI---IEDGVSYTSM--LQGSAPA-------------SLPKQQHHQQQAG 567

Query: 585 ----------SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSS 634
                     + + PS +R+   S+ + +S     A+    + + D ++ V+FGV+ID  
Sbjct: 568 MLTCSSLDHQTNWMPS-LREGDASIPVDASLLPPSASQQALDQDNDPRSHVLFGVNID-- 624

Query: 635 GLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQ--IDQLT---- 688
           G + P        S  P   S P   SG         Q    LLH   +  + Q +    
Sbjct: 625 GQVPP--------SYAPPPFSKPKDFSG--------AQADIALLHAAEENGVPQPSWPQQ 668

Query: 689 ----PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
               P RTF KV+K GSVGRSLDI+RF +Y+ELR EL +MFG+E       +SGWQLVF+
Sbjct: 669 VYPPPVRTFTKVHKVGSVGRSLDITRFKNYHELRNELTRMFGLEHDH----KSGWQLVFI 724

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           D END+LLLGDDPW+ F+  V  I+ILS  ++ +M ++ +E
Sbjct: 725 DNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMNQEHME 765


>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
 gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
          Length = 826

 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 385/815 (47%), Positives = 494/815 (60%), Gaps = 115/815 (14%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           GD K +N  LW  CAGPL++LP +G++VVYFPQGHSEQV A+T+KE D  +P+YPNLPPQ
Sbjct: 10  GDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQ 69

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ-KDTFVPIELGIPSKQPTNYFCKTLTA 133
           L C LHN+T+HAD E DEV+AQMTLQP S     KD F+  + GI +KQ    F KTLTA
Sbjct: 70  LFCILHNITLHADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTA 129

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFS+PRRAAEKVFP LDF+  PPAQEL+ARDLH+ EW FRHI+RGQP+RHLLT
Sbjct: 130 SDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLT 189

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVFVSAKRL AGD+VLF+ +E+ Q +LGIRRA R  T +P+S+LSSDSM IG+LAAA
Sbjct: 190 TGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAA 249

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAA+TNS FT+F+NPRASPSEFVIPL KY KA+   +++VGMRFRM  ETE+SS RRYM
Sbjct: 250 AHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYM 309

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 372
           GTITGI DLDPVRW NSHWRS+KVGWDESTAG++Q RVS WEIEPLT  F +  S F LR
Sbjct: 310 GTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLCNSSFLLR 369

Query: 373 LKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL-GMFPWMQQR------- 424
            KRP         +   +  +   W RG  G+  +  +NF  L GM  W+Q +       
Sbjct: 370 SKRP------RGTEEELQMKAPSIWARGEEGKFSMQNMNFPGLSGMDHWLQLQQKAGGSA 423

Query: 425 --------VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQNPL- 475
                   ++P +        Y ++L   M++ D   +Q MQ  Q FQ +Q + S  PL 
Sbjct: 424 AVTPPPPVIQPGY--------YSSILQE-MRTIDATPKQLMQSPQAFQPMQFNQSIPPLL 474

Query: 476 -----QLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSF 530
                Q +Q  HL   +   A   A             AL+   D+ + R  ++ P    
Sbjct: 475 QQQQQQAQQMMHLPPNVPEAASMHAP--------YIPAALKTPPDQEVNRNSNSYPP--- 523

Query: 531 SKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLG------ 584
                     E  VS + M  + GS P              S+ +QQ  QQ  G      
Sbjct: 524 -------LIIEDGVSYTSM--LQGSAPA-------------SLPKQQHHQQQAGMLTCSS 561

Query: 585 ----SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPT 640
               + + PS +R+   S+ + +S     ++    + + D ++ V+FGV+ID  G + P 
Sbjct: 562 LDHQTNWMPS-LREGDASIPVDASLLPPSSSQQALDQDNDPRSHVLFGVNID--GQVPP- 617

Query: 641 TVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQ--IDQLT--------PT 690
                  S  P   S P   SG         Q    LLH   +  + Q +        P 
Sbjct: 618 -------SYAPPPFSKPKDFSG--------AQPDIALLHAAEENGVPQPSWPQQVYPPPV 662

Query: 691 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
           RTF KV+K GSVGRSLDI+RF +Y+ELR EL +MFG+E       +SGWQLVF+D END+
Sbjct: 663 RTFTKVHKVGSVGRSLDITRFKNYHELRNELTRMFGLEHDH----KSGWQLVFIDNENDM 718

Query: 751 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           LLLGDDPW+ F+  V  I+ILS  ++ +M ++ +E
Sbjct: 719 LLLGDDPWDEFIGCVKSIRILSSSEILQMNQEHME 753


>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1103

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 292/453 (64%), Positives = 344/453 (75%), Gaps = 25/453 (5%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + +   SELWHACAGPLVSLP +G+RVVYFPQGH+EQVAA+T +E ++HIPNYP+LP +L
Sbjct: 70  ERRSPTSELWHACAGPLVSLPPIGSRVVYFPQGHTEQVAASTQREAETHIPNYPSLPSRL 129

Query: 76  ICQLHNVTMH---------------ADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           +C L NVT+H               AD+ETDEVYAQMTL P+ P  +K+  +  ++GI S
Sbjct: 130 VCLLDNVTLHVSDRYSMSLIDVVIQADLETDEVYAQMTLIPVPPANEKEALMSPDIGIRS 189

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +QPT+YFCKTLTASDTSTHGGFS+PRRAAEKVFP LD+S  PPAQEL ARDLHD EW FR
Sbjct: 190 RQPTDYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDYSQTPPAQELKARDLHDQEWHFR 249

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RGQP+RHLLTTGWSVFVSAKRL AGD+VLFI ++K QL LGIRR  R  TVMPSSVL
Sbjct: 250 HIYRGQPRRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVL 309

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIG+LAAA HAAAT+S FT+F+NPR SPSEFVIP+ KY KA+ + +VSVGMRFRM
Sbjct: 310 SSDSMHIGVLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICNLQVSVGMRFRM 369

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           +FETEESSVRRYMGTITG+ DLDP+RW NSHWRS+KVGWDESTAGERQ RVSLWEIEPLT
Sbjct: 370 VFETEESSVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLT 429

Query: 361 T-FPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQ--GLTTLNFQSLGM 417
           T F + P     R KRPW       ++  D      ++  G +G     L  LN ++ GM
Sbjct: 430 TPFLLCPPPLTFRAKRPW---GGRVDEEMDSMLKKASFWSGDSGSHMDALGALNLRNFGM 486

Query: 418 FPWM---QQRVEPSFLGNDHNQQYQAMLAAGMQ 447
             WM   QQRVEP  L    N+ Y+A  AA +Q
Sbjct: 487 SSWMRTPQQRVEPG-LPAQQNEYYRAFAAAALQ 518



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 110/189 (58%), Gaps = 18/189 (9%)

Query: 613 GTENCNTDSQNSVVFGVHIDSSGLLLPTTVSS-----FTTSVDPGV----------SSMP 657
           G E  +  S   ++FGV I+   L+   +V+S     F  S DP            S  P
Sbjct: 719 GQEQDSVQSDRHLLFGVSIEQP-LVGSNSVTSLQPHAFAKSKDPQSRFSGNTVLQGSYYP 777

Query: 658 LGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPT-RTFVKVYKSGSVGRSLDISRFSSYNE 716
            G++    +M G   D + +         + PT RTF KV+K GSVGRS+D+ +F +Y+E
Sbjct: 778 SGNADI-PTMNGVGLDENGIFMRNASWSAMAPTSRTFTKVHKLGSVGRSIDVQKFQNYSE 836

Query: 717 LREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           LR EL ++F +EG  +DP RSGWQLVFVD END LL+GDDPWE FV+ V  IKILSP ++
Sbjct: 837 LRVELARLFNLEGLLDDPQRSGWQLVFVDNENDTLLVGDDPWEEFVNCVRSIKILSPNEI 896

Query: 777 QKMGEQGVE 785
            +M ++ +E
Sbjct: 897 LQMSQEQLE 905


>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 875

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 284/409 (69%), Positives = 328/409 (80%), Gaps = 10/409 (2%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV-AATTNKEVDSHIPNYPNLPPQ 74
           + + LNSELWHACAGPLVSLP VG+RVVYFPQGH+EQV AA+T KE D+HIPNYPNLP +
Sbjct: 4   ERRSLNSELWHACAGPLVSLPPVGSRVVYFPQGHTEQVVAASTQKEADAHIPNYPNLPSR 63

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           L+C L NVT+HAD+ETDEVYAQMTL P+ P  +K+  +  ++G+ S+QPT YFCKTLTAS
Sbjct: 64  LVCLLDNVTLHADLETDEVYAQMTLIPVLPANEKEALISPDIGMRSRQPTEYFCKTLTAS 123

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFS+PRRAAEKVFP LD++  PPAQEL ARDLHD EW FRHI+RGQP+RHLLTT
Sbjct: 124 DTSTHGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLTT 183

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVSAKRL AGD+VLFI ++K QL LGIRR  R  TVMPSSVLSSDSMHIG+LAAA 
Sbjct: 184 GWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAAN 243

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAAT+S FT+F+NPR SPSEFVIP+ KY KA+   +VSVGMRFRM+FETEESSVRRYMG
Sbjct: 244 HAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEESSVRRYMG 303

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 373
           TITG+ DLDP+RW NSHWRS+KVGWDESTAGERQ RVSLWEIEPLTT F + P     R 
Sbjct: 304 TITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLLCPPPVAFRT 363

Query: 374 KRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQ 422
           KRP           RD T+   ++  G      L  LNF++L M  WM+
Sbjct: 364 KRP--------RGGRDSTSKKSSFWSGDEDTGVLGGLNFRNLSMDSWMR 404



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 76/97 (78%)

Query: 689 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           P RTF KV+K GSVGRS+D+ +F +Y+ELR EL ++F ++   +DP R+GWQLVFVD EN
Sbjct: 738 PVRTFTKVHKLGSVGRSIDVQKFQNYSELRAELARLFNLDNLLDDPQRTGWQLVFVDNEN 797

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           D LL+GDDPWE FV+ V  IKILSP ++Q+M ++ +E
Sbjct: 798 DTLLVGDDPWEEFVNYVRSIKILSPNEIQQMRQEQLE 834


>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 411

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 268/365 (73%), Positives = 310/365 (84%), Gaps = 3/365 (0%)

Query: 13  HEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 72
           H    K +NSELWHACAGPLVSLP VG++VVYFPQGHSEQVA +T KE D HIPNYPNL 
Sbjct: 28  HPVGEKRINSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADIHIPNYPNLR 87

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 132
           P LIC L NVT+HAD+ETD+VYAQM L P    E++   +P ++ + +KQPT YFCKTLT
Sbjct: 88  PHLICTLENVTLHADLETDDVYAQMVLIPTQDPEKETMLLP-DVVVQNKQPTEYFCKTLT 146

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR-GQPKRHL 191
           ASDTSTHGGFS+PRRAAEKVFP+LD++ QPPAQEL+ARDLHD +W FRHI+R GQP+RHL
Sbjct: 147 ASDTSTHGGFSIPRRAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHL 206

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+F+SAKRL AGD+VLFI ++K QLLLGIRRA R  T+MPSSVLSSDSMHIG+LA
Sbjct: 207 LTTGWSIFISAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTIMPSSVLSSDSMHIGILA 266

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AA+HAA T+S FT+F+NPR SPSEFVIP  KY KAV+ T+++VGMRFRM+FETEES+VRR
Sbjct: 267 AASHAAQTSSRFTIFYNPRQSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEESTVRR 326

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFP 370
           YMGT+TGI DLDPVRW NSHWRS+KVGWDESTAGERQ RVSLWEIEPLTT F + P    
Sbjct: 327 YMGTVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLICPPPIV 386

Query: 371 LRLKR 375
           LR KR
Sbjct: 387 LRSKR 391


>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
 gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
          Length = 824

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/365 (71%), Positives = 307/365 (84%), Gaps = 3/365 (0%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  +  N ELWHACAGPLVSLP+VGTRVVYFPQGHSEQVAA+T KE D+ IP+YPNLPP 
Sbjct: 19  GVKRGPNPELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPH 78

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           L+CQLHN+T+HAD ETDEVYAQMTLQP++ +E KD+F+  +LG  ++QP+ YFCKTLTAS
Sbjct: 79  LVCQLHNITLHADTETDEVYAQMTLQPMNAQE-KDSFMVSDLGRQNRQPSEYFCKTLTAS 137

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFS+PRRAAEKVFP LDFS QPPAQE++ARDLHD EW+FRHI+RGQP+RHLLTT
Sbjct: 138 DTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTT 197

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVSAKRL  GD+VLFI +EK QLLLGIRRA R    MP S+LS+DSM+IG+LAAAA
Sbjct: 198 GWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAA 257

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT-RVSVGMRFRMLFETEESSVRRYM 313
           HA +T+S FT+F+NPRASPSEFVIPL+KY  AV++  +VS GMRFRM FETEES +RR+ 
Sbjct: 258 HANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHT 317

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 372
           GTI G  DLDPVRW NSHWRS+KV WDE  AGE+Q R+SLWEIEP +T + +    F  R
Sbjct: 318 GTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEPASTPYLVCSPSFTFR 377

Query: 373 LKRPW 377
            KRPW
Sbjct: 378 SKRPW 382



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 101/168 (60%), Gaps = 4/168 (2%)

Query: 620 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLH 679
           DS++ ++FGV I+   +   T  S    S D     +    S  H S      +    L 
Sbjct: 639 DSRSHLLFGVSIEPECI---TPSSQGPKSKDGQQRVLSSTASDLHLSSDNGTLEEPAYLQ 695

Query: 680 NVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 739
                  + P RTF KVYK+GSVGRSLD++R + Y+ LR EL +MFG+EG+ EDP RSGW
Sbjct: 696 RSSSAQHMLP-RTFTKVYKTGSVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGW 754

Query: 740 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 787
           QLVFVD ENDVLL+GDDPWE FVS V  IKI+SP ++  M ++ + + 
Sbjct: 755 QLVFVDNENDVLLVGDDPWEEFVSCVRCIKIMSPAELSHMNQEQLNAI 802


>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
 gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
          Length = 952

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 299/496 (60%), Positives = 360/496 (72%), Gaps = 22/496 (4%)

Query: 5   TSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH 64
           + G+     EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D+ 
Sbjct: 6   SGGVTPSPAEGEKKPINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDT- 64

Query: 65  IPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQP 123
           IP+YP+LP +LIC+L ++T+HAD ETDEVYAQMTLQP++ +  +D  +  ELG+  +KQP
Sbjct: 65  IPSYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVN-KYDRDAMLASELGLKQNKQP 123

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
           T +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+
Sbjct: 124 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIY 183

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQPKRHLLTTGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLS D
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSCD 243

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           SMHIG+LAAAAHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFE
Sbjct: 244 SMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFE 302

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           TE+S VRRYMGTITGI DLDP+RW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P
Sbjct: 303 TEDSGVRRYMGTITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-P 361

Query: 364 MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFP 419
            Y  + P    RP  P      D+  E  S       WL      + +    F  L +  
Sbjct: 362 FY--ICPPPFFRPKLPKQPGMPDDESEVESAFKRAMPWLADDFALKDVQNALFPGLSLVQ 419

Query: 420 WMQQRVEPSFLGNDH---NQQYQAMLAAGMQS--GDPVRQQFMQLQQPFQYLQQSGSQNP 474
           WM  +  P  L         QY    A GMQ   G    Q  ++ QQP      SG Q  
Sbjct: 420 WMAMQQNPQMLATAAPAVQSQYLTSNALGMQDGIGSSSDQHKLKEQQP------SGGQAV 473

Query: 475 LQLKQQQHLLQQLNSQ 490
            Q +   H+LQ  +SQ
Sbjct: 474 SQAQLLNHILQPSSSQ 489



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 71/93 (76%)

Query: 691 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
           RTF KV K GSVGRS+DI+R+  Y +LR +L  MFGI+G+ EDP R+ W+LV+VD END+
Sbjct: 838 RTFTKVQKRGSVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHENDI 897

Query: 751 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 898 LLVGDDPWEEFVSCVKSIKILSSAEVQQMSLDG 930


>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/343 (76%), Positives = 303/343 (88%), Gaps = 2/343 (0%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NSELWHACAGPLVSLP VG++VVYFPQGHSEQVA +T KE D+HIPNYPNL P L+C L
Sbjct: 1   INSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADTHIPNYPNLRPHLVCTL 60

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            N+T+HAD+ETDEVYAQM L P S +  K+T +  +  + +KQPT YFCKTLTASDTSTH
Sbjct: 61  DNITLHADLETDEVYAQMVLIP-SQDPDKETMLLPDAVVQNKQPTEYFCKTLTASDTSTH 119

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR-GQPKRHLLTTGWSV 198
           GGFS+PRRAAEKVFP+LD++ QPPAQEL+ARDLHD +W FRHI+R GQP+RHLLTTGWSV
Sbjct: 120 GGFSIPRRAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSV 179

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVSAKRL AGD+VLFI ++K QLLLGIRRA R  T+MPSSVLSSDSMHIG+LAAA+HAA 
Sbjct: 180 FVSAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTMMPSSVLSSDSMHIGILAAASHAAQ 239

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T+S FT+F+NPR SPSEFVIPL KY KAV+ T+V+VGMRFRM+FETEES+VRRYMGT+TG
Sbjct: 240 TSSRFTIFYNPRQSPSEFVIPLAKYQKAVYSTQVTVGMRFRMVFETEESTVRRYMGTVTG 299

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           I DLDPVRW NSHWRS+KVGWDESTAGERQ RVSLWEIEPLTT
Sbjct: 300 IGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTT 342


>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 372

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 271/363 (74%), Positives = 310/363 (85%), Gaps = 2/363 (0%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGH EQVAA+T K+ D+HIPNYP+LP +
Sbjct: 1   GERRSLNSELWHACAGPLVSLPPVGSRVVYFPQGHIEQVAASTQKDADAHIPNYPSLPSK 60

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           +IC L NVT+HAD ETDEVYAQM L P+   E++    P +L + +KQPT YFCKTLTAS
Sbjct: 61  IICLLDNVTLHADPETDEVYAQMILLPIQISEKEALLSP-DLEVVNKQPTEYFCKTLTAS 119

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFS+PRRAAEKVFP LDF+  PPAQEL+ARDLHD EW FRHI+RGQP+RHLLTT
Sbjct: 120 DTSTHGGFSIPRRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPRRHLLTT 179

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVSAKRL AGDSVLFI ++K  LLLGIRRA R  TVMPSSVLSSDSMH G+LAAA+
Sbjct: 180 GWSVFVSAKRLQAGDSVLFIRDDKGNLLLGIRRANRQQTVMPSSVLSSDSMHFGVLAAAS 239

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAAT+S F +F+NPR SPSEFVIPLTKY KA+++T+ +VGMRFRM+FETEESSVRRY+G
Sbjct: 240 HAAATSSRFKIFYNPRQSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESSVRRYVG 299

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 373
           TITG+ DLDP+RW  SHWRS+KVGWDESTAGERQ RVSLWEIEPLTT F + P    LR 
Sbjct: 300 TITGLGDLDPIRWPKSHWRSLKVGWDESTAGERQHRVSLWEIEPLTTPFLLCPPPLALRS 359

Query: 374 KRP 376
           KRP
Sbjct: 360 KRP 362


>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
 gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
          Length = 1053

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 298/497 (59%), Positives = 361/497 (72%), Gaps = 26/497 (5%)

Query: 5   TSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH 64
           + G+     EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D+ 
Sbjct: 6   SGGVTPSPAEGEKKPINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDT- 64

Query: 65  IPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQP 123
           +P+YP+LP +LIC+L ++T+HAD ETDEVYAQM LQP++ +  +D  +  ELG+  +KQP
Sbjct: 65  VPSYPSLPSKLICKLLSLTLHADSETDEVYAQMMLQPVN-KYDRDAMLASELGLKQNKQP 123

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
           T +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+
Sbjct: 124 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIY 183

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQPKRHLLTTGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSD
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSSD 243

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           SMHIG+LAAAAHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFE
Sbjct: 244 SMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFE 302

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           TE+S VRRYMGTITGI DLDP+RW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P
Sbjct: 303 TEDSGVRRYMGTITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-P 361

Query: 364 MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFP 419
            Y  + P    RP  P  +   D+ +E  S       WL      + +    F  L +  
Sbjct: 362 FY--ICPPPFFRPKLPKQAGMPDDENEVESAFKRAMPWLADDFALKDVQNALFPGLSLVQ 419

Query: 420 WMQQRVEPSFLGNDH---NQQYQAMLAAGMQSG------DPVRQQFMQLQQPFQYLQQSG 470
           WM  +  P  L         QY    A GMQ G      DP ++  MQ Q       Q+G
Sbjct: 420 WMAMQQNPQMLATASPAVQSQYLTSNALGMQDGIGSVSEDPTKRLTMQAQNIGLPNLQAG 479

Query: 471 SQ------NPLQLKQQQ 481
           S+       PL   QQQ
Sbjct: 480 SKVDHPAITPLAQHQQQ 496



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 71/93 (76%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KV K GSVGRS+DI+R+  Y +LR +L  MFGI+G+ EDP R+ W+LV+VD END+
Sbjct: 939  RTFTKVQKRGSVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHENDI 998

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 999  LLVGDDPWEEFVSCVKSIKILSSVEVQQMSLDG 1031


>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
          Length = 1063

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 280/422 (66%), Positives = 333/422 (78%), Gaps = 11/422 (2%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           EG+ K +NSELWHACAGPLV++P VG+ VVYFPQGHSEQVAA+ NKEVD  IPNYP+LP 
Sbjct: 15  EGEKKAINSELWHACAGPLVAMPPVGSLVVYFPQGHSEQVAASMNKEVDV-IPNYPSLPS 73

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLT 132
           +LIC+L ++T+HAD ETDEVYAQMTLQP+S +  +D  +  ELG+  +KQP  +FCKTLT
Sbjct: 74  KLICKLLSLTLHADSETDEVYAQMTLQPVS-KYDRDAMLASELGLKQNKQPMEFFCKTLT 132

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAEK+FP LDF++QPPAQEL+A+DLHD+ WKFRHIFRGQPKRHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKRHLL 192

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRR+ RP   + SSVLSSDSMHIG+LAA
Sbjct: 193 TTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTRPQPALSSSVLSSDSMHIGILAA 252

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFETE+S VRRY
Sbjct: 253 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFETEDSGVRRY 311

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           MGTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P Y  + P  
Sbjct: 312 MGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-PFY--ICPPP 368

Query: 373 LKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPS 428
             RP  P      D+ +E  S       WL      + + +  F  L +  WM  +  P 
Sbjct: 369 FFRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSQLFPGLSLVQWMAMQQNPQ 428

Query: 429 FL 430
            L
Sbjct: 429 ML 430



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 77/107 (71%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KV K GSVGRS+DI+R+ +Y+ELR +L  MFGI+G+ EDP R  W+LV+VD END+
Sbjct: 947  RTFTKVQKRGSVGRSIDITRYRNYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDI 1006

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 797
            LL+GDDPWE FVS V  IKILS  +VQ+M   G     PS  Q  ++
Sbjct: 1007 LLVGDDPWEEFVSCVKSIKILSSVEVQQMSLDGDLGGIPSQTQACSA 1053


>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
 gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
          Length = 1055

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 281/431 (65%), Positives = 337/431 (78%), Gaps = 11/431 (2%)

Query: 5   TSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH 64
           +SG+     EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D +
Sbjct: 6   SSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-N 64

Query: 65  IPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQP 123
           IP YP+LP +LIC+L ++T+HAD ETDEVYAQMTLQP++ +  +D  +  ELG+  +KQP
Sbjct: 65  IPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVN-KYDRDAMLASELGLKQNKQP 123

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
             +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+
Sbjct: 124 AEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIY 183

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQPKRHLLTTGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSD
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSD 243

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           SMHIG+LAAAAHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFE
Sbjct: 244 SMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFE 302

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           TE+S VRRYMGTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P
Sbjct: 303 TEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-P 361

Query: 364 MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFP 419
            Y  + P    RP  P      D+ +E  S       WL      + + +  F  L +  
Sbjct: 362 FY--ICPPPFFRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQ 419

Query: 420 WMQQRVEPSFL 430
           WM  +  P  L
Sbjct: 420 WMAMQQNPQML 430



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 70/93 (75%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KV K GSVGRS+DI+R+  Y+ELR +L  MFGI+G+ EDP R  W+LV+VD END+
Sbjct: 940  RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDI 999

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPWE FV  V  IKILS  +VQ+M   G
Sbjct: 1000 LLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDG 1032


>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
 gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
          Length = 1055

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 280/431 (64%), Positives = 336/431 (77%), Gaps = 11/431 (2%)

Query: 5   TSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH 64
           +SG+     EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D +
Sbjct: 6   SSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-N 64

Query: 65  IPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQP 123
           IP YP+LP +LIC+L ++T+HAD ETDEVY QMTLQP++ +  +D  +  ELG+  +KQP
Sbjct: 65  IPGYPSLPSKLICKLLSLTLHADSETDEVYVQMTLQPVN-KYDRDAMLASELGLKQNKQP 123

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
             +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+
Sbjct: 124 AEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIY 183

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQPKRHLLTTGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSD
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSD 243

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           SMHIG+LAAAAHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFE
Sbjct: 244 SMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFE 302

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           TE+S VRRYMGTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P
Sbjct: 303 TEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-P 361

Query: 364 MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFP 419
            Y  + P    RP  P      D+ +E  S       WL      + + +  F  L +  
Sbjct: 362 FY--ICPPPFFRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQ 419

Query: 420 WMQQRVEPSFL 430
           WM  +  P  L
Sbjct: 420 WMAMQQNPQML 430



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 70/93 (75%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KV K GSVGRS+DI+R+  Y+ELR +L  MFGI+G+ EDP R  W+LV+VD END+
Sbjct: 940  RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDI 999

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPWE FV  V  IKILS  +VQ+M   G
Sbjct: 1000 LLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDG 1032


>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
 gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
          Length = 1057

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 271/366 (74%), Positives = 313/366 (85%), Gaps = 5/366 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK+ ++G      EG+ KC+NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE
Sbjct: 1   MKVPSNGFLPNFAEGERKCINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IP+YPNLP +LIC LHNVT+HADVETDEVYAQMTLQP+S  E K+  +  ++G+  
Sbjct: 61  TD-FIPSYPNLPSKLICMLHNVTLHADVETDEVYAQMTLQPVSKYE-KEALLASDMGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+ARDLHD  W F
Sbjct: 119 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHAAA NS FT+F+NPRASPSEFVIP +KY KA++ T+VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKALY-TQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGISD+DPVRW NS WR+++VGWDESTAGER  RVS+WEIEP+
Sbjct: 298 MMFETEESGVRRYMGTITGISDMDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPV 357

Query: 360 TTFPMY 365
            T P Y
Sbjct: 358 VT-PFY 362



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 7/122 (5%)

Query: 669  GCMQD----SSELLHN---VGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 721
            GC  D     + +L+N     Q +Q    RT+ KV K GSVGRS+D++R+  YNELR +L
Sbjct: 901  GCSNDVAINDTGVLNNGLWTNQTNQTQRMRTYTKVQKRGSVGRSIDVTRYKGYNELRHDL 960

Query: 722  GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
             +MFGIEG+ EDP  S W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQ+M  
Sbjct: 961  ARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 1020

Query: 782  QG 783
             G
Sbjct: 1021 DG 1022


>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 970

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 288/453 (63%), Positives = 344/453 (75%), Gaps = 14/453 (3%)

Query: 5   TSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH 64
           +SG+     EG+ K +NSELWHAC+GPLV++P VG+ VVYFPQGHSEQVAA+ +KEVD  
Sbjct: 6   SSGVSPGPPEGEKKAINSELWHACSGPLVAMPPVGSLVVYFPQGHSEQVAASMHKEVDI- 64

Query: 65  IPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQP 123
           IPNYP+LP +LIC+L ++T+HAD ETDEVYAQMTLQP++ +  +D  +  ELG+  +KQP
Sbjct: 65  IPNYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVN-KYDRDAMLASELGLKQNKQP 123

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
             +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDF++QPPAQEL+A+DLHD+ WKFRHIF
Sbjct: 124 VEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIF 183

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQPKRHLLTTGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSD
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSD 243

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           SMHIG+LAAAAHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFE
Sbjct: 244 SMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFE 302

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           TE+S VRRYMGTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P
Sbjct: 303 TEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-P 361

Query: 364 MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFP 419
            Y  + P    RP  P      D+  E  S       WL      + + +  F  L +  
Sbjct: 362 FY--ICPPPFFRPKLPKQPGMPDDESEVDSAFKRAMPWLGDDFALKDVQSQLFPGLSLVQ 419

Query: 420 WMQQRVEPSFL--GNDHNQQ-YQAMLAAGMQSG 449
           WM  +  P  L  G    Q  Y    A GMQ G
Sbjct: 420 WMAMQQNPQMLPAGAPAVQAPYLNSSAMGMQDG 452


>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
          Length = 1084

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 280/426 (65%), Positives = 327/426 (76%), Gaps = 11/426 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK   +G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE
Sbjct: 1   MKAPPNGFLAGSGEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            +  +P+YPNLP +LIC LHNVT+HAD ETDEVYAQMTLQP+S +  K+  +  +LG+  
Sbjct: 61  TEC-VPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVS-KYDKEALLASDLGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S+QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++ARDLHD  W F
Sbjct: 119 SRQPVEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +S DSMHIG+LAAAAHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFR
Sbjct: 239 ISCDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGIS+LD  RW NS WR+++VGWDESTAGER  RVS+WEIEP+
Sbjct: 298 MMFETEESGVRRYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPV 357

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTTLNFQSL 415
            T P Y  L P    RP  P    F D+  +  S    G+ WL    G +   +  F  L
Sbjct: 358 VT-PFY--LCPPPFFRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPGL 414

Query: 416 GMFPWM 421
            +  WM
Sbjct: 415 NLVQWM 420



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 82/119 (68%), Gaps = 4/119 (3%)

Query: 669  GCMQD----SSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 724
            GC  D     + +L N    +Q    RT+ KV K GSVGRS+D++R+  Y+ELR +L +M
Sbjct: 931  GCSNDVAITETGVLSNGLWTNQAQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARM 990

Query: 725  FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            FGIEG+ EDP R+ W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 991  FGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDG 1049


>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/426 (65%), Positives = 327/426 (76%), Gaps = 11/426 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK   +G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE
Sbjct: 1   MKAPPNGFLAGSGEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            +  +P+YPNLP +LIC LHNVT+HAD ETDEVYAQMTLQP+S +  K+  +  +LG+  
Sbjct: 61  TEC-VPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVS-KYDKEALLASDLGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S+QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++ARDLHD  W F
Sbjct: 119 SRQPVEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +S DSMHIG+LAAAAHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFR
Sbjct: 239 ISCDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGIS+LD  RW NS WR+++VGWDESTAGER  RVS+WEIEP+
Sbjct: 298 MMFETEESGVRRYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPV 357

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTTLNFQSL 415
            T P Y  L P    RP  P    F D+  +  S    G+ WL    G +   +  F  L
Sbjct: 358 VT-PFY--LCPPPFFRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPGL 414

Query: 416 GMFPWM 421
            +  WM
Sbjct: 415 NLVQWM 420


>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
          Length = 1034

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/367 (71%), Positives = 305/367 (83%), Gaps = 2/367 (0%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           EG+ K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+VD+ IPNYPNLP 
Sbjct: 20  EGEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPS 79

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLT 132
           +L+C LHNVT+HAD ETDEVYAQMTLQP+ P   K++ +  +L + + +P T++FCKTLT
Sbjct: 80  RLLCILHNVTLHADPETDEVYAQMTLQPV-PAYDKESLLRSDLALKTNKPQTDFFCKTLT 138

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 198

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS+FVS KRL AGD+VLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAA
Sbjct: 199 TTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 258

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAAA NS FTVF+NPRASPSEFVIPL KY KA +  ++S+GMRFRM+FETEES  RRY
Sbjct: 259 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRY 318

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           MGTITGISDLDPVRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T           R
Sbjct: 319 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFR 378

Query: 373 LKRPWHP 379
            KRP  P
Sbjct: 379 SKRPRQP 385



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 5/122 (4%)

Query: 665  NSMYGCMQDSSELLHNVGQ---IDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 721
            NS+   + DSS L  N G      Q    RT+ KVYK G+VGRS+DI+R+S Y+EL+++L
Sbjct: 895  NSIDSAINDSSFL--NRGPWAPAPQFQRMRTYTKVYKRGAVGRSIDITRYSGYDELKQDL 952

Query: 722  GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
             + FGIEG+ ED  R GW+LV+VD ENDVLL+GDDPWE FV+ V  IKILSP++VQ+M  
Sbjct: 953  ARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1012

Query: 782  QG 783
             G
Sbjct: 1013 DG 1014


>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
 gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
          Length = 1120

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/434 (63%), Positives = 331/434 (76%), Gaps = 7/434 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK   +G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+
Sbjct: 1   MKAPNNGYMPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IP+YPNLP +LIC LHNV +HAD ETDEVYAQMTLQP++ +  KD  +  + G+  
Sbjct: 61  TD-FIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVN-KYDKDAILASDFGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W F
Sbjct: 119 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVF+S KRL AGDSVLFI +EK QLLLG+RRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFISTKRLFAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHAAA NS FT+++NPRASPSEFV+PL KY KA++ T+VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHAAANNSPFTIYYNPRASPSEFVVPLAKYNKAMY-TQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGT+TGISDLDPVRW NS WR+++VGWDESTAGER  RVS+W+IEP+
Sbjct: 298 MMFETEESGVRRYMGTVTGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPV 357

Query: 360 TT-FPMYPSLFPLRLKRPWHPST-SSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGM 417
            T F + P  F  R   P HP      +D  +     + WL    G +  ++  F  L +
Sbjct: 358 VTPFYICPPPF-FRQNFPGHPGMPDDGSDVENSFKRAMPWLGDDFGMKDASSSVFPGLSL 416

Query: 418 FPWMQQRVEPSFLG 431
             WM  + +  F G
Sbjct: 417 VQWMSMQQKNQFSG 430



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 95/150 (63%), Gaps = 8/150 (5%)

Query: 639  PTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGC-----MQDSSELLHNVGQIDQLTPTRTF 693
            P  + +  ++ D    S  L D  F     GC     + D+S +L+N  + +Q    RT+
Sbjct: 939  PRDIETELSTADISSQSFGLPDMSFKP---GCSNDVGINDTSGVLNNGLRANQNQRMRTY 995

Query: 694  VKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 753
             KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+LL+
Sbjct: 996  TKVQKRGSVGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLV 1055

Query: 754  GDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 1056 GDDPWEEFVSCVQSIKILSSAEVQQMSLDG 1085


>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
          Length = 1117

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/367 (71%), Positives = 305/367 (83%), Gaps = 2/367 (0%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G+ K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+VD+ IPNYPNLP 
Sbjct: 22  KGEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPS 81

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLT 132
           +L+C LHNVT+HAD ETDEVYAQMTLQP+ P   K++ +  +L + + +P T++FCKTLT
Sbjct: 82  RLLCILHNVTLHADPETDEVYAQMTLQPV-PAYDKESLLRSDLALKTNKPQTDFFCKTLT 140

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLL
Sbjct: 141 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 200

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS+FVS KRL AGD+VLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAA
Sbjct: 201 TTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 260

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAAA NS FTVF+NPRASPSEFVIPL KY KA +  ++S+GMRFRM+FETEES  RRY
Sbjct: 261 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRY 320

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           MGTITGISDLDPVRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T           R
Sbjct: 321 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFR 380

Query: 373 LKRPWHP 379
            KRP  P
Sbjct: 381 SKRPRQP 387



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 5/122 (4%)

Query: 665  NSMYGCMQDSSELLHNVGQ---IDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 721
            NS+   + DSS L  N G      Q    RT+ KVYK G+VGRS+DI+R+S Y+EL+++L
Sbjct: 978  NSIDSAINDSSFL--NRGPWAPAPQFQRMRTYTKVYKRGAVGRSIDITRYSGYDELKQDL 1035

Query: 722  GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
             + FGIEG+ ED  R GW+LV+VD ENDVLL+GDDPWE FV+ V  IKILSP++VQ+M  
Sbjct: 1036 ARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1095

Query: 782  QG 783
             G
Sbjct: 1096 DG 1097


>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
 gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
          Length = 1109

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 265/365 (72%), Positives = 300/365 (82%), Gaps = 2/365 (0%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + K +N ELW ACAGPLVSLP  GT VVYFPQGHSEQVAA+  K+VD+ IPNYPNLP +L
Sbjct: 28  EKKSINQELWQACAGPLVSLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKL 87

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTAS 134
            C LHNVT+HAD ETDEVYAQMTLQP+ P   KD  +  +L + S +P T++FCKTLTAS
Sbjct: 88  FCLLHNVTLHADPETDEVYAQMTLQPV-PSFDKDALLRSDLTLKSNKPQTDFFCKTLTAS 146

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLTT
Sbjct: 147 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPKRHLLTT 206

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWS+FVS KRL AGDSVLFI ++K QLLLGIRRA R P  + SSVLSSDSMHIG+LAAAA
Sbjct: 207 GWSLFVSGKRLFAGDSVLFIRDDKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 266

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAA NS FTVF+NPRASPSEFVIPL KY KAV   ++S+GMRFRM+FETEES  RRYMG
Sbjct: 267 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYMG 326

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T           R K
Sbjct: 327 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 386

Query: 375 RPWHP 379
           RP  P
Sbjct: 387 RPRQP 391



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 75/93 (80%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KVYK G+VGRS+DI+R+S Y EL+++L + FGIEG+ ED  R GW+LV+VD ENDV
Sbjct: 997  RTYTKVYKRGAVGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDV 1056

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1057 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1089


>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
 gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
          Length = 1119

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 282/436 (64%), Positives = 332/436 (76%), Gaps = 11/436 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK+  +G      EG+ K +NSELWHACAGPLV+LP VG+ VVYFPQGHSEQVAA+  KE
Sbjct: 1   MKVPPNGFMANSAEGERKSINSELWHACAGPLVALPPVGSLVVYFPQGHSEQVAASMQKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IP+YPNLP +LIC LHNVT+HAD ETDEVYAQMTLQP++ +  K+  +  ++G+  
Sbjct: 61  TD-FIPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVN-KYDKEALLASDMGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S+QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+ARDLHD  W F
Sbjct: 119 SRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHAAA NS FT+F+NPRASPSEFVIP +KY KA++ T+VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKAMY-TQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGISDLDPVRW  S WR+++VGWDESTAGER  RVS+WE+EP+
Sbjct: 298 MMFETEESGVRRYMGTITGISDLDPVRWKTSQWRNLQVGWDESTAGERPSRVSIWEVEPV 357

Query: 360 TTFPMY----PSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
            T P Y    P   P   K+P  P   S  D  +     + WL    G +   +  F  L
Sbjct: 358 VT-PFYICPPPFFRPKFPKQPGMPDDES--DIENAFKRAMPWLGDDFGLKDTQSSIFPGL 414

Query: 416 GMFPWMQQRVEPSFLG 431
            +  WM  +    F G
Sbjct: 415 SLVQWMSMQQNNQFPG 430



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 4/119 (3%)

Query: 669  GCMQD----SSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 724
            GC  D     S +L+     +Q    RT+ KV K GSVGRS+D++R+  Y+ELR +L +M
Sbjct: 966  GCSNDVAINDSGVLNGGLWANQTQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARM 1025

Query: 725  FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            FGIEG+ EDP  S W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 1026 FGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDG 1084


>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
 gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
 gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
          Length = 1112

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 308/546 (56%), Positives = 374/546 (68%), Gaps = 36/546 (6%)

Query: 3   LSTSGLCQQ----GHEGD--NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAAT 56
           ++T+G+ QQ    G+ G+   K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+
Sbjct: 5   VNTAGVQQQHTVNGNPGEVEKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAAS 64

Query: 57  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL 116
             K+VD+ IPNYPNLP +L+C LHN+T+HAD E DEVYAQMTLQP+ P   K+  +  +L
Sbjct: 65  MKKDVDAQIPNYPNLPSKLVCLLHNITLHADPEADEVYAQMTLQPV-PSFDKEALLRSDL 123

Query: 117 GIPSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDV 175
            + + +P T +FCKTLTASDTSTHGGFSVPRR+AEK+FP LD+S+QPPAQEL+ARDLHD 
Sbjct: 124 SMKANKPQTEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDYSMQPPAQELVARDLHDN 183

Query: 176 EWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM 235
            W FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R PT +
Sbjct: 184 LWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNL 243

Query: 236 PSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVG 295
            SSVLSSDSMHIG+LAAAAHAAA NS FTVF+NPRAS SEFVIPL KY KA + ++VS+G
Sbjct: 244 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASHSEFVIPLAKYYKATYSSQVSLG 303

Query: 296 MRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWE 355
           MRFRM+FETEES  RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGER+ RVS+WE
Sbjct: 304 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWE 363

Query: 356 IEPLTT-FPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN--------WLR---GGTG 403
           IEP+T  F + P+    R KRP  P         D+  S L+        WL    G   
Sbjct: 364 IEPVTAPFFICPTPPFFRSKRPRLPGMP------DDDCSDLDGLFKRTMPWLGDDFGMKD 417

Query: 404 EQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS----GDPVRQQFMQL 459
            QGL       L +  WM  +  PS   +       ++  + +Q+     D  RQ  +  
Sbjct: 418 PQGLP-----GLSLVQWMNMQQNPSLANSMQPNYLHSLSGSVLQNVGGGADLSRQLCLPA 472

Query: 460 QQ-PFQYLQQSGSQNPLQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELL 518
            Q P Q   Q GSQ P Q  QQ   LQ++ +     A    QPQQ +   + Q R + + 
Sbjct: 473 PQLPQQNTLQFGSQRPTQQVQQLDQLQKIPTTTLSPAGSIMQPQQQLSDISQQPRQNLIN 532

Query: 519 QRQQSN 524
           Q   +N
Sbjct: 533 QSVPTN 538



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 77/98 (78%)

Query: 686  QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 745
            Q+   RTF KV+K G+VGRS+DI+R+S Y EL+++L + FGIEG+ ED  R GW+LV+VD
Sbjct: 996  QMPRMRTFTKVHKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 1055

Query: 746  RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
             ENDVLL+GDDPWE FV+ V  IKILSP++VQ++   G
Sbjct: 1056 HENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQISLDG 1093


>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
 gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
          Length = 1113

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/369 (70%), Positives = 300/369 (81%), Gaps = 2/369 (0%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G   + K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+V++ IPNYPNL
Sbjct: 15  GEGVEKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASLKKDVNAQIPNYPNL 74

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKT 130
           P +L+C LHNVT+HAD ETDEVY QMTLQP+S  + KD  +  +L + S +P T +FCKT
Sbjct: 75  PSKLLCLLHNVTLHADPETDEVYVQMTLQPVSSFD-KDALLRSDLALKSNKPQTEFFCKT 133

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK FP LDFS+QPPAQEL+ARDLHD  W FRHI+RGQPKRH
Sbjct: 134 LTASDTSTHGGFSVPRRAAEKTFPPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRH 193

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FVS KRL AGDSVLF+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+L
Sbjct: 194 LLTTGWSLFVSGKRLFAGDSVLFMRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGIL 253

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAAHAAA NS FTV++NPRASPSEFVIPL KY KAV+  ++S+GMRFRM+FETEES  R
Sbjct: 254 AAAAHAAANNSPFTVYYNPRASPSEFVIPLAKYYKAVYSNQISLGMRFRMMFETEESGTR 313

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 370
           R+MGTITGISDLD VRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T          
Sbjct: 314 RHMGTITGISDLDAVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPF 373

Query: 371 LRLKRPWHP 379
            R K P  P
Sbjct: 374 FRSKHPRQP 382



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/146 (50%), Positives = 94/146 (64%), Gaps = 12/146 (8%)

Query: 642  VSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQ----IDQLTPTRTFVKVY 697
            +SS   S   GV  MP       NS+   + DSS  L N G       Q    RT+ KVY
Sbjct: 956  LSSAIVSKSFGVPDMPF------NSIDSTINDSS--LLNRGSWAPPQQQFQRMRTYTKVY 1007

Query: 698  KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDP 757
            K G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  R GW+LV+ D ENDVLL+GDDP
Sbjct: 1008 KRGAVGRSIDITRYSGYDELKQDLARRFGIEGQLEDQQRIGWKLVYTDHENDVLLVGDDP 1067

Query: 758  WEAFVSNVWYIKILSPEDVQKMGEQG 783
            WE FV+ V  IKILSP++VQ+M   G
Sbjct: 1068 WEEFVNCVRCIKILSPQEVQQMSLDG 1093


>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
          Length = 1097

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 266/366 (72%), Positives = 308/366 (84%), Gaps = 5/366 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ NKE
Sbjct: 1   MKAPSNGFLANSGEGERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IPNYPNLP +LIC LHNVT+HAD ETDEVYAQMTLQP++  E K+  +  ++G+  
Sbjct: 61  TD-FIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYE-KEALLASDIGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S+QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FP LD+S+QPPAQEL+ARDLHD  W F
Sbjct: 119 SRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LA+AAHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFR
Sbjct: 239 ISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGISD+D VRW NS WR+++VGWDES AGER  RVS+WE+EP+
Sbjct: 298 MMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPV 357

Query: 360 TTFPMY 365
            T P Y
Sbjct: 358 VT-PFY 362



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 72/93 (77%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+
Sbjct: 970  RTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDI 1029

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPW+ FVS V  IKILS  +VQ+M   G
Sbjct: 1030 LLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 1062


>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
          Length = 1081

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 266/366 (72%), Positives = 308/366 (84%), Gaps = 5/366 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ NKE
Sbjct: 1   MKAPSNGFLANSGEGERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IPNYPNLP +LIC LHNVT+HAD ETDEVYAQMTLQP++  E K+  +  ++G+  
Sbjct: 61  TD-FIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYE-KEALLASDIGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S+QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FP LD+S+QPPAQEL+ARDLHD  W F
Sbjct: 119 SRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LA+AAHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFR
Sbjct: 239 ISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGISD+D VRW NS WR+++VGWDES AGER  RVS+WE+EP+
Sbjct: 298 MMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPV 357

Query: 360 TTFPMY 365
            T P Y
Sbjct: 358 VT-PFY 362



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 54/89 (60%), Positives = 71/89 (79%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+
Sbjct: 970  RTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDI 1029

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            LL+GDDPW+ FVS V  IKILS  +VQ+M
Sbjct: 1030 LLVGDDPWDEFVSCVQSIKILSSAEVQQM 1058


>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
          Length = 1125

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 275/426 (64%), Positives = 327/426 (76%), Gaps = 11/426 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK   +G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE
Sbjct: 1   MKAPPNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSVVVYFPQGHSEQVAASMQKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IP+YPNLP +LIC LHNV +HAD ETDEVYAQMTLQP++ +  K+  +  ++G+  
Sbjct: 61  AD-FIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVN-KYDKEALLASDMGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W F
Sbjct: 119 NQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK QLLLGI+RA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHAA+ NS FT+F+NPRASPSEFVIPL KY KA+F+ +VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALFN-QVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGI+DLDPVRW NS WR+++VGWDESTAGER  RVS+W+IEP+
Sbjct: 298 MMFETEESGVRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPV 357

Query: 360 TTFPMY----PSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
            T P Y    P   P   K+P  P   S  D  +     + WL    G +  ++  F   
Sbjct: 358 VT-PFYICPPPFFRPKFPKQPGMPDDES--DIENAFKRAMPWLGDDLGMKDASSSVFPGF 414

Query: 416 GMFPWM 421
            +  WM
Sbjct: 415 SLMQWM 420



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 13/166 (7%)

Query: 640  TTVSSFTTSVDP-GVSSMPLGDSGFHNSMYGCMQDSS----ELLHNVGQIDQLTPTRTFV 694
            T +S+   S  P GV  MP           GC  D +     +L+N    +Q    RT+ 
Sbjct: 950  TELSTAALSPQPFGVPDMPFKP--------GCSSDIAINDPGVLNNGLWANQTQRMRTYT 1001

Query: 695  KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 754
            KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+LL+G
Sbjct: 1002 KVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVG 1061

Query: 755  DDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN 800
            DDPWE FVS V  IKILS  +VQ+M   G     P   Q  +   N
Sbjct: 1062 DDPWEEFVSCVQSIKILSSSEVQQMSLDGDLGHVPVPNQACSGTDN 1107


>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
 gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
          Length = 1090

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/422 (64%), Positives = 319/422 (75%), Gaps = 14/422 (3%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ K LN ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+V++ IPNYPNLP +
Sbjct: 11  GEKKNLNPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASIKKDVEAQIPNYPNLPAK 70

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 133
           LIC LHNVT+HAD ETDEVYAQMTLQP+ P   K+  +  +L + + +P   +FCKTLTA
Sbjct: 71  LICLLHNVTLHADPETDEVYAQMTLQPV-PSFDKEALLRSDLSMKANKPQPEFFCKTLTA 129

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAEK+FP LD+SLQPPAQEL+ARDLHD  W FRH++RGQPKRHLLT
Sbjct: 130 SDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRGQPKRHLLT 189

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS+ VS KRL AGDSVLFI +EK+Q LLGIR+A R PT + SSVLSSDSMHIG+LAAA
Sbjct: 190 TGWSLVVSGKRLFAGDSVLFIRDEKHQFLLGIRKANRQPTNLSSSVLSSDSMHIGILAAA 249

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAAA NS FTVF+NPRA PSEFVIPL KY KA + +++S+GMRFRM+FETEES  RRYM
Sbjct: 250 AHAAANNSPFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETEESGTRRYM 309

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 372
           GTITGISDLDPVRW NS WR+++VGWDESTAGER  RVS+WEIEP+T  F +  S F   
Sbjct: 310 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITAPFLICSSPF-FS 368

Query: 373 LKRPWHPST--SSFNDNRDETASGLNWLR---GGTGEQGLTTLNFQSLGMFPWMQQRVEP 427
            KRP  P      ++D        + WL    G    QGL       L +  WM  +  P
Sbjct: 369 SKRPRQPGMPDGDYSDMDGMFKRTMPWLGDDFGMADPQGLP-----GLSLIQWMNMQKNP 423

Query: 428 SF 429
           S 
Sbjct: 424 SL 425



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 61/98 (62%), Positives = 76/98 (77%)

Query: 686  QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 745
            QL   RT+ KVYK G+VGRS+DI+R+S Y EL+ +L + FGIEG+ ED  R GW+LV+VD
Sbjct: 973  QLPRLRTYTKVYKRGAVGRSIDIARYSGYEELKLDLARRFGIEGQLEDRQRIGWKLVYVD 1032

Query: 746  RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
             ENDVLL+GDDPWE FVS V  IKILSP++VQ+M   G
Sbjct: 1033 HENDVLLVGDDPWEEFVSCVRCIKILSPQEVQQMSLDG 1070


>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 758

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/360 (71%), Positives = 298/360 (82%), Gaps = 2/360 (0%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + LNSELWHACAG LVSLP VG+RVVYFPQGH EQVAA+T KE D  IPNYP+LP +L C
Sbjct: 2   RSLNSELWHACAGSLVSLPPVGSRVVYFPQGHIEQVAASTQKEADVPIPNYPSLPSRLFC 61

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
            L NV++HAD ETDEVYAQMTL P+   E++    P  + IP+KQP+ YFCKTLTASDTS
Sbjct: 62  LLDNVSLHADHETDEVYAQMTLLPIQNSEKEALLAPDSV-IPNKQPSEYFCKTLTASDTS 120

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFS+PRRAAEKVFP LDF+  PPAQEL+ARDLHD +W FRHI+RGQP+RHLLTTGWS
Sbjct: 121 THGGFSIPRRAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPRRHLLTTGWS 180

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVS KRL AGDSVLFI ++K+ LLLGIRRA R  +VMPSSVLSSDSMH G+LAAA+HAA
Sbjct: 181 VFVSIKRLQAGDSVLFIRDDKDHLLLGIRRANRQQSVMPSSVLSSDSMHFGVLAAASHAA 240

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           AT+S F +F+NPR SPSEFVIPL KY KA+++T+V++GMRFRM FETEES+VR+YMGTIT
Sbjct: 241 ATSSRFKIFYNPRQSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESNVRKYMGTIT 300

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL-TTFPMYPSLFPLRLKRP 376
            I DLDP RW  S WRS+KVGWDES AG+RQ RVSLWEIEP  T F + P    LR KRP
Sbjct: 301 CIGDLDPARWPKSDWRSLKVGWDESIAGDRQLRVSLWEIEPTPTPFLLCPPPVALRSKRP 360


>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
          Length = 947

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 255/369 (69%), Positives = 300/369 (81%), Gaps = 4/369 (1%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q   G  K +NSELWHACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPN
Sbjct: 32  QDQSGPRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPN 91

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCK 129
           LP QL+CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCK
Sbjct: 92  LPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNSE--KDIFPIPDFGLKPSKHPSEFFCK 149

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD+ + FRHI+RGQPKR
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKR 209

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWSVFVSAKRL AGD+VLFI +EK+QLLLG+RRA R  T +PSSVLS+DSMHIG+
Sbjct: 210 HLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGV 269

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA  S FT+F+NPRA PSEFVIPL KY K+V+ T++SVGMRF M+FETEES  
Sbjct: 270 LAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGK 329

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTI GISDLDP+ W  S WR+++V WDES  G++Q RVS WEIE   +  ++PSL 
Sbjct: 330 RRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIETPESLFIFPSLT 389

Query: 370 PLRLKRPWH 378
              LKRP H
Sbjct: 390 S-SLKRPMH 397



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 1/114 (0%)

Query: 673 DSSELLHNVG-QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF 731
           D S LL N   Q     P RT+ KV K GSVGRS+D++ F +Y EL   +  MFG+EG  
Sbjct: 818 DESSLLQNSSWQQVAPPPMRTYTKVQKMGSVGRSIDVASFKNYEELCSAIECMFGLEGLL 877

Query: 732 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
            D   SGW+LV+VD ENDVLL+GDDPW+ FV  V  I+ILSP +VQ+M E+G++
Sbjct: 878 NDQKGSGWKLVYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQ 931


>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
 gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
           Full=Auxin-responsive protein IAA22
 gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
 gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
 gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
 gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 1086

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 265/426 (62%), Positives = 327/426 (76%), Gaps = 11/426 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G     +EG+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+
Sbjct: 1   MKAPSNGFLPSSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IPNYPNLP +LIC LH+VT+HAD ETDEVYAQMTLQP++ +  ++  +  ++G+  
Sbjct: 61  TD-FIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVN-KYDREALLASDMGLKL 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W F
Sbjct: 119 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLF+ +EK+QL+LGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHA A +S FT+FFNPRASPSEFV+PL KY KA++  +VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETE+  VRRYMGT+TGISDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP+
Sbjct: 298 MMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPV 357

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSL 415
            T P Y  + P    RP +P      D+  +  +       W+    G +   +  F  L
Sbjct: 358 IT-PFY--ICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEDFGMKDAQSSMFPGL 414

Query: 416 GMFPWM 421
            +  WM
Sbjct: 415 SLVQWM 420



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 96/144 (66%), Gaps = 6/144 (4%)

Query: 652  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 709
            G+ S+P    G  N + G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 921  GIPSIPF-KPGCSNEV-GGINDSG--IMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVT 976

Query: 710  RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 769
            R+S Y+ELR +L +MFGIEG+ EDPL S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 977  RYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 1036

Query: 770  ILSPEDVQKMGEQGVESFSPSSGQ 793
            ILS  +VQ+M   G  +  P++ Q
Sbjct: 1037 ILSSVEVQQMSLDGDLAAIPTTNQ 1060


>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
          Length = 1149

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 255/359 (71%), Positives = 299/359 (83%), Gaps = 4/359 (1%)

Query: 4   STSGLCQQGHEGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEV 61
           + + L   G EG+ K   +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+V
Sbjct: 24  TVASLAGAGCEGEKKAPVINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDV 83

Query: 62  DSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK 121
           D+H+PNYPNLP +LIC LHN+T+HAD+ETDEVYAQMTLQP++    K+     EL +   
Sbjct: 84  DAHVPNYPNLPSKLICLLHNITLHADLETDEVYAQMTLQPVT-SYGKEALQLSELALKQS 142

Query: 122 QPTN-YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +P N +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE+ ARDLHD  W FR
Sbjct: 143 RPQNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFR 202

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RGQPKRHLLTTGWS+FVS KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVL
Sbjct: 203 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVL 262

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIG+LAAAAHA A NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM
Sbjct: 263 SSDSMHIGILAAAAHADANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRM 322

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           +FETEE   RRYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+
Sbjct: 323 MFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPV 381



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 74/93 (79%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DIS+++ Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1015 RTFTKVYKRGAVGRSIDISQYAGYDELKHALARMFSIEGQLEERQRIGWKLVYRDHEDDI 1074

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V YI+ILSP++VQ+M   G
Sbjct: 1075 LLLGDDPWEEFVNCVKYIRILSPQEVQQMSLDG 1107


>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
          Length = 1099

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 296/549 (53%), Positives = 372/549 (67%), Gaps = 43/549 (7%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G   + + +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  ++VD+ IPNYPNL
Sbjct: 16  GEAPERRHINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKRDVDAQIPNYPNL 75

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKT 130
           P +L+C LHNVT+HAD ETDEVYAQMTLQP+S  + K+  +  +L + S +P   +FCKT
Sbjct: 76  PSKLLCLLHNVTLHADPETDEVYAQMTLQPVSSFD-KEALLRSDLSLKSNKPQPEFFCKT 134

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+FP LDFS+Q PAQEL+ARDLH+  WKFRHI+RG+PKRH
Sbjct: 135 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQTPAQELVARDLHENVWKFRHIYRGKPKRH 194

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FVS KRL AGDSVLFI +E  QLLLGIRRA R P  + SSVLSSDSMHIG+L
Sbjct: 195 LLTTGWSLFVSGKRLFAGDSVLFIRDETQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 254

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAAHAAA NS FTVF+NPRAS SEFVIPL KY KAV++ ++S GMRFRM+FETEES  R
Sbjct: 255 AAAAHAAANNSPFTVFYNPRASLSEFVIPLAKYYKAVYNHQISPGMRFRMMFETEESGTR 314

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 370
           RYMGTITGISD+DPVRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T  P +    P
Sbjct: 315 RYMGTITGISDIDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA-PFFICPSP 373

Query: 371 L-RLKRPWHPS--TSSFNDNRDETASGLNW------LRGGTGEQGLTTLNFQSLGMFPWM 421
           L R KRP  P      ++D  +     + W      L+      GL+ + + ++   P +
Sbjct: 374 LFRSKRPRQPGMLADEYSDLDNLFKRPMPWLGDDICLKDSDAHPGLSLVQWMNMQQNPLL 433

Query: 422 QQRVEPSFLGNDHNQQYQAMLAAGMQS--GDPVRQQF----MQLQQP--FQYLQQSGSQN 473
              ++P+F+        Q++  + MQ+  G  +  Q      Q+ QP   Q+      Q 
Sbjct: 434 ANSMQPNFM--------QSLAGSTMQNFDGADLSHQMGLSAPQMPQPNNLQFNAHRLPQK 485

Query: 474 PLQLKQQQHLLQQLNS--------QAEDRAQQQQQ-------PQQHMYHDALQIRTDELL 518
             QL Q   L   +NS        Q  D  QQ +Q       P   +      +R++ +L
Sbjct: 486 VQQLDQVPKLPSTMNSLGSIIQPQQLNDMTQQSRQNLVAQTLPSSQVLQPQALVRSNNIL 545

Query: 519 QRQQSNLPS 527
            +QQ++ P+
Sbjct: 546 HQQQTSNPT 554



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 82/110 (74%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  R GW+LV+VD ENDV
Sbjct: 987  RTYTKVYKRGAVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRVGWKLVYVDHENDV 1046

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN 800
            LL+GDDPWE F++ V  IKILSP++VQ+M   G    S    Q  +S GN
Sbjct: 1047 LLVGDDPWEEFINCVRCIKILSPQEVQQMSMDGEFGNSVLPNQDCSSSGN 1096


>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
          Length = 1131

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 263/366 (71%), Positives = 306/366 (83%), Gaps = 5/366 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE
Sbjct: 1   MKAPSNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IP+YPNLP +LIC LHNV +HAD ETDEVYAQMTLQP++  E K+  +  ++G+  
Sbjct: 61  AD-FIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYE-KEAILASDMGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LD+S+QPPAQEL+A+DLHD  W F
Sbjct: 119 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK  LLLGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHAAA NS FT+F+NPRASPSEFV+PL KY K V +T+VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNK-VTYTQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGI+DLDPVRW +S WR+++VGWDESTAGER  RVS+WEIEP+
Sbjct: 298 MMFETEESGVRRYMGTITGINDLDPVRWKSSQWRNIQVGWDESTAGERPSRVSIWEIEPV 357

Query: 360 TTFPMY 365
            T P Y
Sbjct: 358 VT-PFY 362



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 96/161 (59%), Gaps = 17/161 (10%)

Query: 652  GVSSMPLGDSGFHNSMYGC-----MQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRS 705
            GV +MP           GC     + D+  L +N G     TP  RT+ KV K GSVGR 
Sbjct: 966  GVPNMPFKP--------GCSSDVGINDTGVLNNNNGLRANQTPRMRTYTKVQKRGSVGRC 1017

Query: 706  LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 765
            +D++R+  Y+ELR +L +MFGIEG+ EDPLR+ W+LV+VD END+LL+GDDPW+ FVS V
Sbjct: 1018 IDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHENDILLVGDDPWDEFVSCV 1077

Query: 766  WYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 803
              IKILS  +VQ+M   G+ G     P+        GN  R
Sbjct: 1078 QSIKILSSAEVQQMSLDGDLGGNVPIPNQAYSGTDSGNAWR 1118


>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
          Length = 1123

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 286/474 (60%), Positives = 344/474 (72%), Gaps = 32/474 (6%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE D  IP+YPNLP +
Sbjct: 1   GERKLMNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDG-IPSYPNLPSK 59

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 133
           LIC LHNVT+HAD ETDEVYAQMTLQP++  +Q+   +  E+G+  ++QP  +FCKTLTA
Sbjct: 60  LICMLHNVTLHADTETDEVYAQMTLQPVNKYDQEALLLS-EMGLKQNRQPAEFFCKTLTA 118

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAEK+FP LD+++QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 119 SDTSTHGGFSVPRRAAEKIFPPLDYAMQPPAQELMARDLHDQTWTFRHIYRGQPKRHLLT 178

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVF+S+KRL AGDSVLFI +EK+QLLLGI+R  R    + SSV+SSDSMHIG+LAAA
Sbjct: 179 TGWSVFISSKRLCAGDSVLFIRDEKSQLLLGIKRTNRQQPALSSSVISSDSMHIGILAAA 238

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAAA NS FT+F+NPRASPSEFVIPL KY KA++  +VS+GMRFRM+FETEES VRRYM
Sbjct: 239 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-AQVSLGMRFRMMFETEESGVRRYM 297

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY----PSLF 369
           GTITG+SDLDP+RW +S WR+++VGWDESTAGER  RVS+W+IEP+ T P Y    P   
Sbjct: 298 GTITGVSDLDPIRWKSSQWRNLQVGWDESTAGERPSRVSIWDIEPVVT-PFYICPPPFFR 356

Query: 370 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQ------- 422
           P   K+P  P   S  D  +    G+ W+    G +      F  L +  WM        
Sbjct: 357 PKFPKQPSFPGDES--DIENVLKRGMPWINDELGLKDAQNSIFPGLSLVQWMSMQQNNHV 414

Query: 423 ---QRVEPSFL-----GNDH----NQQYQAMLAAGMQSGDP--VRQQFMQLQQP 462
              Q   PS L      +DH    N Q  A+   G+Q   P  +   F Q+QQP
Sbjct: 415 PVAQSGLPSVLHSNIGSDDHSKLLNFQSPALATPGLQFNKPNQLTSHFGQIQQP 468



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 65/139 (46%), Positives = 90/139 (64%), Gaps = 13/139 (9%)

Query: 658  LGDSGFHNSMYG---------CMQD----SSELLHNVGQIDQLTPTRTFVKVYKSGSVGR 704
            L D+G ++  +G         C  D     + +L+N    +Q    RT+ KV K GSVGR
Sbjct: 951  LSDAGINSQQFGVPNMSYKPRCANDLAVNDNGILNNNAWTNQTQRMRTYTKVQKRGSVGR 1010

Query: 705  SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 764
            ++D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+LL+GDDPWE FVS 
Sbjct: 1011 TIDVTRYIGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSC 1070

Query: 765  VWYIKILSPEDVQKMGEQG 783
            V  IKILS  +VQ+M   G
Sbjct: 1071 VQSIKILSCAEVQQMSLNG 1089


>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
          Length = 1136

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/366 (71%), Positives = 305/366 (83%), Gaps = 5/366 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE
Sbjct: 1   MKAPSNGYLPNSGEGERKTMNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IP+YPNLP +LIC LHNV +HAD ETDEVYAQMTLQP++  E K+  +  ++G+  
Sbjct: 61  AD-FIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYE-KEAILASDIGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+ P LD+S+QPPAQEL+A+DLHD  W F
Sbjct: 119 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKILPPLDYSMQPPAQELVAKDLHDNTWAF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK  LLLGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHAAA NS FT+F+NPRASPSEFV+PL KY KA++ T+VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMY-TQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VR YMGTITGISDLDPVRW +S WR+++VGWDESTAGER  RVS+WEIEP+
Sbjct: 298 MMFETEESGVRGYMGTITGISDLDPVRWKSSQWRNIQVGWDESTAGERPRRVSIWEIEPV 357

Query: 360 TTFPMY 365
            T P Y
Sbjct: 358 VT-PFY 362



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 96/161 (59%), Gaps = 17/161 (10%)

Query: 652  GVSSMPLGDSGFHNSMYGC-----MQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRS 705
            GV +MP           GC     + D+  L +N G     TP  RT+ KV K GSVGR 
Sbjct: 971  GVPNMPFKP--------GCSSDVGINDTGVLNNNNGLRTNQTPRMRTYTKVQKRGSVGRC 1022

Query: 706  LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 765
            +D++R+  Y+ELR +L +MFGIEG+ EDPLR+ W+LV+VD END+LL+GDDPW+ FVS V
Sbjct: 1023 IDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHENDILLVGDDPWDEFVSCV 1082

Query: 766  WYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 803
              IKILS  +VQ+M   G+ G     P+        GN  R
Sbjct: 1083 QSIKILSSAEVQQMSLDGDLGGNVPIPNQACSGTDSGNAWR 1123


>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
          Length = 1049

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 265/426 (62%), Positives = 325/426 (76%), Gaps = 11/426 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G      EG+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+
Sbjct: 1   MKAPSNGFHPNPAEGEKKAINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IPNYPNLP +LIC LH+VT+HAD ETDEVYAQMTLQP++ +  ++  +  ++G+  
Sbjct: 61  TD-FIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVN-KYDREALLASDMGLKI 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W F
Sbjct: 119 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLF+ +EK+QL LGIRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHA A +S FT+FFNPRASPSEFV+PL KY KA++  +VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETE+  VRRYMGT+TGISDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP+
Sbjct: 298 MMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPV 357

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSL 415
            T P Y  + P    RP +P      D+  +  +       W+    G +   +  F  L
Sbjct: 358 IT-PFY--ICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEEFGMKDAQSSMFPGL 414

Query: 416 GMFPWM 421
            +  WM
Sbjct: 415 SLVQWM 420



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 67/142 (47%), Positives = 93/142 (65%), Gaps = 3/142 (2%)

Query: 652  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRF 711
            G+ S+P   SG  N + G   + S +++     +Q    RT+ KV K GSVGRS+D++R+
Sbjct: 885  GIPSIPF-KSGGSNEIGGI--NDSGIMNGGIWPNQAQRMRTYTKVQKRGSVGRSIDVTRY 941

Query: 712  SSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 771
            S Y ELR +L +MFGIEG+ EDP  S W+LV+ D END+LL+GDDPWE FV+ V  IKIL
Sbjct: 942  SGYEELRNDLARMFGIEGQLEDPQISDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKIL 1001

Query: 772  SPEDVQKMGEQGVESFSPSSGQ 793
            S  +VQ+M   G  +  P++ Q
Sbjct: 1002 SSAEVQQMSLDGDLAAIPTTNQ 1023


>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
          Length = 925

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 252/363 (69%), Positives = 299/363 (82%), Gaps = 4/363 (1%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           ++ +NSELWHACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPNLP QL+
Sbjct: 16  SEAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLM 75

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTASD 135
           CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCKTLTASD
Sbjct: 76  CQVHNVTLHADKDTDEIYAQMSLQPVNSE--KDIFPIPDFGLKPSKHPSEFFCKTLTASD 133

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD+ + FRHI+RGQPKRHLLTTG
Sbjct: 134 TSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTTG 193

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVSAKRL AGD+VLFI +EK+QLLLG+RRA R  T +PSSVLS+DSMHIG+LAAAAH
Sbjct: 194 WSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAH 253

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AAA  S FT+F+NPRA PSEFVIPL KY K+V+ T++SVGMRF M+FETEES  RRYMGT
Sbjct: 254 AAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMGT 313

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           I GISDLDP+ W  S WR+++V WDES  G++Q RVS WEIE   +  ++PSL    LKR
Sbjct: 314 IVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIETPESLFIFPSLTS-SLKR 372

Query: 376 PWH 378
           P H
Sbjct: 373 PMH 375



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 1/114 (0%)

Query: 673 DSSELLHNVG-QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF 731
           D S LL N   Q     P RT+ KV K GSVGRS+D++ F +Y EL   +  MFG+EG  
Sbjct: 796 DESSLLQNSSWQQVAPPPMRTYTKVQKMGSVGRSIDVASFKNYEELCSAIECMFGLEGLL 855

Query: 732 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
            D   SGW+LV+VD ENDVLL+GDDPW+ FV  V  I+ILSP +VQ+M E+G++
Sbjct: 856 NDQKGSGWKLVYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQ 909


>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
          Length = 1138

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/367 (70%), Positives = 297/367 (80%), Gaps = 2/367 (0%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           +G +     +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPN
Sbjct: 15  EGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPN 74

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCK 129
           LP +LIC LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCK
Sbjct: 75  LPSKLICLLHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCK 133

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKR
Sbjct: 134 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKR 193

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+
Sbjct: 194 HLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGI 253

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   
Sbjct: 254 LAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGT 313

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+          
Sbjct: 314 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPP 373

Query: 370 PLRLKRP 376
               KRP
Sbjct: 374 FFGAKRP 380



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 3/116 (2%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1004 RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDI 1063

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 803
            LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 1064 LLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 1119


>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
          Length = 1137

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/367 (70%), Positives = 297/367 (80%), Gaps = 2/367 (0%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           +G +     +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPN
Sbjct: 15  EGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPN 74

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCK 129
           LP +LIC LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCK
Sbjct: 75  LPSKLICLLHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCK 133

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKR
Sbjct: 134 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKR 193

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+
Sbjct: 194 HLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGI 253

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   
Sbjct: 254 LAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGT 313

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+          
Sbjct: 314 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPP 373

Query: 370 PLRLKRP 376
               KRP
Sbjct: 374 FFGAKRP 380



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 3/116 (2%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1003 RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDI 1062

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 803
            LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 1063 LLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 1118


>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
          Length = 1161

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/367 (70%), Positives = 297/367 (80%), Gaps = 2/367 (0%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           +G +     +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPN
Sbjct: 38  EGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPN 97

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCK 129
           LP +LIC LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCK
Sbjct: 98  LPSKLICLLHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCK 156

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKR
Sbjct: 157 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKR 216

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+
Sbjct: 217 HLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGI 276

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   
Sbjct: 277 LAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGT 336

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+          
Sbjct: 337 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPP 396

Query: 370 PLRLKRP 376
               KRP
Sbjct: 397 FFGAKRP 403



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 3/116 (2%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1027 RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDI 1086

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 803
            LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 1087 LLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 1142


>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
          Length = 1123

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/366 (70%), Positives = 296/366 (80%), Gaps = 2/366 (0%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G +     +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNL
Sbjct: 1   GEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNL 60

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKT 130
           P +LIC LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCKT
Sbjct: 61  PSKLICLLHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCKT 119

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRH
Sbjct: 120 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRH 179

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+L
Sbjct: 180 LLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGIL 239

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAAHAAA NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   R
Sbjct: 240 AAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTR 299

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 370
           RYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+           
Sbjct: 300 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPF 359

Query: 371 LRLKRP 376
              KRP
Sbjct: 360 FGAKRP 365



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 3/116 (2%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 989  RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDI 1048

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 803
            LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 1049 LLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 1104


>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
          Length = 1122

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 272/426 (63%), Positives = 323/426 (75%), Gaps = 11/426 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK   SG      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE
Sbjct: 1   MKAPPSGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IP+YPNLP +LIC LHNV +HAD ETDEVYAQMTLQP++ +  K+  +  ++G+  
Sbjct: 61  AD-FIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVN-KYDKEAILASDMGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W F
Sbjct: 119 NQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK QLLLGI+RA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHAA+ NS FT+F+NPRASPSEFVIP  KY KA+++   S+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPSAKYNKALYN-HASLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGI+D+DPVRW NS WR+++VGWDESTAGER  RVS+W+IEP+
Sbjct: 298 MMFETEESGVRRYMGTITGITDVDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPV 357

Query: 360 TTFPMY----PSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
            T P Y    P   P   K P  P   S  D  +     + WL    G +  ++  F   
Sbjct: 358 VT-PFYICPPPFFRPKFPKEPGMPDDES--DIENAFKRAMPWLGDDLGMKDASSSVFPGF 414

Query: 416 GMFPWM 421
            +  WM
Sbjct: 415 SLMQWM 420



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/136 (48%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 669  GCMQDSS----ELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 724
            GC  D +     +L+N    +Q    RT+ KV K GSVGR +D++R+  Y+ELR +L +M
Sbjct: 969  GCSSDIAINDPGVLNNGLWANQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARM 1028

Query: 725  FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
            FGIEG+ EDP R+ W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQKM   G 
Sbjct: 1029 FGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQKMSLDGD 1088

Query: 785  ESFSPSSGQRANSRGN 800
                P   Q  +   N
Sbjct: 1089 LGHVPVPNQACSGTDN 1104


>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
 gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
          Length = 1047

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/426 (64%), Positives = 325/426 (76%), Gaps = 11/426 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK+ ++G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE
Sbjct: 1   MKVPSNGFLPNSAEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  +P+YPNL  +LIC LHNVT+HADVETDEVYAQMTLQP+S +  K+  +  +LG   
Sbjct: 61  TD-FVPSYPNLTSKLICMLHNVTLHADVETDEVYAQMTLQPVS-KYDKEALLASDLGQKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S+QPT +FCKTLTASDTSTHGGF VPRRAAEK+FP LDFS+QPPAQEL+ARDLHD  W F
Sbjct: 119 SRQPTEFFCKTLTASDTSTHGGFFVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KR+  GDSVLFI +EK+QLLLGIR A R    + SS+
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRIFTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSL 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHAAA NS FT+F+NP ASPSEFVIP +KY KA++ T+ S+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHAAANNSPFTIFYNPSASPSEFVIPFSKYNKAMY-TQGSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+F TEES VRRYMGTITGISDLDPVRW NS WR+++VGWDESTA ER  RVS+WEIEP+
Sbjct: 298 MMFTTEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPV 357

Query: 360 TTFPMY----PSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
            T P Y    P   P   K+P  P+  S  D  +     + WL    G++   +  F  L
Sbjct: 358 VT-PFYICPPPFFRPKFPKQPGMPNDES--DTENAFKRAVPWLGDEFGKKDAASSIFPGL 414

Query: 416 GMFPWM 421
            +  WM
Sbjct: 415 SLVQWM 420



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/132 (49%), Positives = 89/132 (67%), Gaps = 4/132 (3%)

Query: 652  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRF 711
            GVS++P    G ++       + + +L+N    +Q    RT+ KV K GSVGRS+DI+ +
Sbjct: 896  GVSNIPFKPDGSND----IAINDTGILNNGAWTNQNQRMRTYTKVQKRGSVGRSIDITCY 951

Query: 712  SSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 771
              Y+ELR +L +MFGIEG+ EDP  S W+LV+VDREND+LL+GDDPWE F+S V  IKIL
Sbjct: 952  KGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDRENDILLVGDDPWEEFMSCVQSIKIL 1011

Query: 772  SPEDVQKMGEQG 783
            S  +VQ+M   G
Sbjct: 1012 SSAEVQQMSLDG 1023


>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
 gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
 gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
 gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
          Length = 991

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/367 (70%), Positives = 297/367 (80%), Gaps = 2/367 (0%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           +G +     +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPN
Sbjct: 38  EGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPN 97

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCK 129
           LP +LIC LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCK
Sbjct: 98  LPSKLICLLHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCK 156

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKR
Sbjct: 157 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKR 216

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+
Sbjct: 217 HLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGI 276

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   
Sbjct: 277 LAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGT 336

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+          
Sbjct: 337 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPP 396

Query: 370 PLRLKRP 376
               KRP
Sbjct: 397 FFGAKRP 403



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 83/120 (69%), Gaps = 3/120 (2%)

Query: 687 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           L   RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D 
Sbjct: 853 LKRMRTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDH 912

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 803
           E+D+LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 913 EDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 972


>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
          Length = 1020

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 264/426 (61%), Positives = 325/426 (76%), Gaps = 11/426 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G      EG+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+
Sbjct: 1   MKAPSNGFHPSSAEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IPNYPNLP +LIC LH+VT+HAD ETDEVYAQMTLQP++ +  ++  +  ++G+  
Sbjct: 61  TD-FIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVN-KYDREALLASDMGLKL 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W F
Sbjct: 119 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL+AGDSVLF+ +EK+QL L IRRA R    + SSV
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLIAGDSVLFVRDEKSQLTLVIRRANRQTPTLSSSV 238

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHA A NS FT+FFNPRASPSEFV+PL KY KA++  +VS+GMRFR
Sbjct: 239 ISSDSMHIGILAAAAHANANNSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFR 297

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETE+  VRRYMGT+TG+SDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP+
Sbjct: 298 MMFETEDCGVRRYMGTVTGVSDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSVWEIEPV 357

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSL 415
            T P Y  + P    RP +P      D+  +  +       W+    G +   +  F  L
Sbjct: 358 IT-PFY--ICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEEFGMKDAQSSMFPGL 414

Query: 416 GMFPWM 421
            +  WM
Sbjct: 415 SLVQWM 420



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 6/144 (4%)

Query: 652 GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 709
           G+ S+P    G  ++  G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 855 GIPSIPFKSGG--SNEIGGVNDSG--IMNGGGLWPNQAQRMRTYTKVQKRGSVGRSIDVT 910

Query: 710 RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 769
           R+S Y+ELR +L +MFGIEG+ EDP  S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 911 RYSGYDELRNDLARMFGIEGQLEDPRPSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 970

Query: 770 ILSPEDVQKMGEQGVESFSPSSGQ 793
           ILS  +VQ+M   G  +  P++ Q
Sbjct: 971 ILSSVEVQQMSLDGDLAAIPATNQ 994


>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
          Length = 1107

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/366 (71%), Positives = 299/366 (81%), Gaps = 4/366 (1%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + K +N ELW ACAGPLV+LP  G  VVYFPQGHSEQVAA+  K+VD  +PNYP+L  +L
Sbjct: 23  EKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKL 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTAS 134
           +C LHNVT+HAD ETDEVYAQMTL P+ P   KD  +  +L + S +P   +FCKTLTAS
Sbjct: 83  LCLLHNVTLHADPETDEVYAQMTLLPV-PSFDKDALLRSDLALKSNKPQPEFFCKTLTAS 141

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTT 201

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWS+FVS KRL+AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 261

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAA NS FTVF+NPRASPSEFVIPL KY KAV   ++S+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMG 321

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 373
           TITGISDLDPVRW  S WR+++VGWDEST GER+ RVS+WEIEP+   F + P  F LR 
Sbjct: 322 TITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPF-LRS 380

Query: 374 KRPWHP 379
           KRP  P
Sbjct: 381 KRPRQP 386



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 76/93 (81%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  + GW+LV+VD ENDV
Sbjct: 995  RTYTKVYKRGAVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDV 1054

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPW+ FV+ V  IKILSP++VQ+M   G
Sbjct: 1055 LLVGDDPWDDFVNCVRSIKILSPQEVQQMSLDG 1087


>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 255/374 (68%), Positives = 300/374 (80%), Gaps = 9/374 (2%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q   G  K +NSELWHACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPN
Sbjct: 33  QDQSGPRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPN 92

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCK 129
           LP QL+CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCK
Sbjct: 93  LPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNSE--KDIFPIPDFGLKPSKHPSEFFCK 150

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD+ + FRHI+RGQPKR
Sbjct: 151 TLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKR 210

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWSVFVSAKRL AGD+VLFI +EK+QLLLG+RRA R  T +PSSVLS+DSMHIG+
Sbjct: 211 HLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGV 270

Query: 250 LAAAAHAAATNSCFTVFFNPR-----ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           LAAAAHAAA  S FT+F+NPR     A PSEFVIPL KY K+V+ T++SVGMRF M+FET
Sbjct: 271 LAAAAHAAANRSPFTIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFET 330

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
           EES  RRYMGTI GISDLDP+ W  S WR+++V WDES  G++Q RVS WEIE   +  +
Sbjct: 331 EESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIETPESLFI 390

Query: 365 YPSLFPLRLKRPWH 378
           +PSL    LKRP H
Sbjct: 391 FPSLTS-SLKRPMH 403



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 1/114 (0%)

Query: 673 DSSELLHNVG-QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF 731
           D S LL N   Q     P RT+ KV K GSVGRS+D++ F +Y EL   +  MFG+EG  
Sbjct: 778 DESSLLQNSSWQQVAPPPMRTYTKVQKMGSVGRSIDVASFKNYEELCSAIECMFGLEGLL 837

Query: 732 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
            D   SGW+LV+VD ENDVLL+GDDPW+ FV  V  I+ILSP +VQ+M E+G++
Sbjct: 838 NDQKGSGWKLVYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQ 891


>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
 gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
 gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
          Length = 930

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/365 (68%), Positives = 298/365 (81%), Gaps = 4/365 (1%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  K ++SELWHACAGPLV+LP VG+ V YFPQGHSEQVA +TN+   S IPNYPNL  Q
Sbjct: 36  GGRKLISSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTNRTATSQIPNYPNLASQ 95

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTA 133
           L+CQ+HNVT+HAD ETDE+YAQM+LQP++ E  KD F   + G+ P+K PT +FCKTLTA
Sbjct: 96  LLCQVHNVTLHADKETDEIYAQMSLQPVNSE--KDVFPIPDFGLKPNKHPTEFFCKTLTA 153

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAEK+FP LD+S+QPP QEL+ RDLHD  W FRHI+RGQPKRHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 213

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRA R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 214 TGWSMFVGAKRLRAGDSVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAA 273

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAAA  S FT+F+NPRA PSEFVIPL K+ K+V++T++SVGMRF M+FETEES  RRYM
Sbjct: 274 AHAAANRSTFTIFYNPRACPSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEESGKRRYM 333

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GTI+GISDLDP+RW  S WR ++V WDE   G++Q RVS WE+E   +  ++PSL    L
Sbjct: 334 GTISGISDLDPLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVETPESLFIFPSL-TAGL 392

Query: 374 KRPWH 378
           KRP+ 
Sbjct: 393 KRPYQ 397



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 110/195 (56%), Gaps = 5/195 (2%)

Query: 606 NGKDAAVGTENCN---TDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 662
           N   + V  E CN   TD QN   F +   SS   + + ++S + +     S     D+ 
Sbjct: 729 NSVSSTVLDEFCNLKHTDFQNPSDFLLGNISSSQDVQSQITSASLADSQNFSVQEFADNS 788

Query: 663 FHNSMYGCMQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREEL 721
              S      D   LL N     Q+ P  RT+ K+ K+GSVGRS+D+S F +Y ELR E+
Sbjct: 789 GGASSSNVNFDECNLLQN-SSWQQVAPRVRTYTKIQKTGSVGRSIDVSGFKNYEELRSEI 847

Query: 722 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
            +MFG+EG   D   S W+LV+VD ENDVLL+GDDPWE FV  V  I+ILSP +VQ+MGE
Sbjct: 848 ERMFGLEGLLNDTRGSSWKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMGE 907

Query: 782 QGVESFSPSSGQRAN 796
           +G++  + +  Q  N
Sbjct: 908 EGMQLLNSAGLQSIN 922


>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
 gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
          Length = 950

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 251/369 (68%), Positives = 295/369 (79%), Gaps = 4/369 (1%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q H G  K +NSELW+ACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPN
Sbjct: 33  QDHSGTRKTINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPN 92

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCK 129
           L  QL+CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCK
Sbjct: 93  LASQLLCQVHNVTLHADRDTDEIYAQMSLQPVNSE--KDVFPIPDFGLKPSKHPSEFFCK 150

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LD+++QPP QEL+ RDLHD  W FRHI+RGQPKR
Sbjct: 151 TLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKR 210

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FV +KRL AGDSVLFI +EK+QLL+G+RRA R  T +PS VLS+DSMHIG+
Sbjct: 211 HLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMHIGV 270

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA  S FT+F+NPRA PSEFVIPL KY KAVF T+VSVGMRF M+FETEES  
Sbjct: 271 LAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEESGK 330

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTI GISDLDP+RW  S WR+++V WDE    ++Q RVS WEIE      ++PSL 
Sbjct: 331 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIETPENLFIFPSLT 390

Query: 370 PLRLKRPWH 378
              LKRP H
Sbjct: 391 S-GLKRPLH 398



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 75/101 (74%), Gaps = 1/101 (0%)

Query: 686 QLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q+ P  RT+ KV K+GSVGRS+D+S F +Y EL   +  MFG+EG   +P  SGW+LV+V
Sbjct: 830 QVAPRVRTYTKVQKAGSVGRSIDVSGFKNYEELCSAIECMFGLEGLLNNPRESGWKLVYV 889

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           D ENDVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 890 DYENDVLLIGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMK 930


>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
 gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
          Length = 961

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 277/443 (62%), Positives = 328/443 (74%), Gaps = 15/443 (3%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE--VDSHIPNYPNLP 72
           G+ K +N+ LW  CAGPLV+LPTVG+ VVYFPQGHSEQV A+T ++  V++ IPNYPNLP
Sbjct: 7   GEKKAMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPNLP 66

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 132
             LIC LHN+T+HAD +TDEVYAQMTLQP+  +  K+ F+  +LGI  KQ T  FCKTLT
Sbjct: 67  AHLICHLHNITLHADPDTDEVYAQMTLQPV--QNDKEPFLTPDLGIQPKQQTLSFCKTLT 124

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFS+PRRAAEKVFP LDF+ QPPAQEL+A+DLH+ +W FRHI+RGQP+RHLL
Sbjct: 125 ASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLL 184

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWSVFVSAKRL AGD+VLFI +E N LLLGIRRA R    +PSS+LSSDSM IG+LAA
Sbjct: 185 TTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAA 244

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAA TNS FT+F+NPRAS SEFV+P  ++ KA +H RV+VGMRFRM  ETE+SS RRY
Sbjct: 245 AAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRY 304

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYPSLFP 370
           MGTITGI DLD VRW NS WR++KVGWDESTAG+RQ RVSLWEIEPLT   FP   SLF 
Sbjct: 305 MGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQKRVSLWEIEPLTAPYFPCTSSLF- 363

Query: 371 LRLKRPWHPSTSSFN----DNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWM--QQR 424
           LR KR       SF     D  D   S + W R   G+  +  LN   L +  W+  Q +
Sbjct: 364 LR-KRTRLDGMLSFCAGELDELDAIRSQV-WARAEDGKMDIRALNAAGLSLEHWLRFQHK 421

Query: 425 VEPSFLGNDHNQQYQAMLAAGMQ 447
            E +         Y+AM A  +Q
Sbjct: 422 PEAAIATASQPDYYRAMAAQALQ 444



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 11/129 (8%)

Query: 688 TPTRTFVKV-YKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF-EDPLRSGWQLVFVD 745
           +P RTF KV YK+GSVGRS+D++R  +Y ELR ++ +MF +EG+   D  RS WQLVFVD
Sbjct: 822 SPMRTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVD 881

Query: 746 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR---------AN 796
            E DVLL+GDDPWE FV  V +IKILSP +VQ++  + +ES +    QR         AN
Sbjct: 882 YEGDVLLVGDDPWEEFVGCVRFIKILSPSEVQQLNRENLESIAAVPNQRQTSSSSDDCAN 941

Query: 797 SRGNCGRDP 805
              N  +DP
Sbjct: 942 PTNNFAQDP 950


>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1096

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/440 (60%), Positives = 328/440 (74%), Gaps = 25/440 (5%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G     +EG+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+
Sbjct: 1   MKAPSNGFLPTSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IPNYPNLP +LIC LH+VT+HAD ETDEVYAQMTLQP++ +  ++  +  ++G+  
Sbjct: 61  TD-FIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVN-KYDREALLASDMGLKL 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W F
Sbjct: 119 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTF 178

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-----------W---NEKNQLLLGI 225
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLF+           W   +EK+QL+LGI
Sbjct: 179 RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRIGLSSSHKGTWVCRDEKSQLMLGI 238

Query: 226 RRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVK 285
           RRA R    + SSV+SSDSMHIG+LAAAAHA A +S FT+FFNPRASPSEF++PL KY K
Sbjct: 239 RRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFIVPLAKYNK 298

Query: 286 AVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAG 345
           A++  +VS+GMRFRM+FETE+  VRRYMGT+TGISDLDPVRW  S WR+++VGWDESTAG
Sbjct: 299 ALY-AQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAG 357

Query: 346 ERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGG 401
           +R  RVS+WEIEP+ T P Y  + P    RP +P      D+  +  +       W+   
Sbjct: 358 DRPSRVSIWEIEPVIT-PFY--ICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGED 414

Query: 402 TGEQGLTTLNFQSLGMFPWM 421
            G +   +  F  L +  WM
Sbjct: 415 FGMKDAQSSMFPGLSLVQWM 434



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/144 (49%), Positives = 96/144 (66%), Gaps = 6/144 (4%)

Query: 652  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 709
            G+ S+P   SG  N + G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 931  GIPSIPF-KSGCSNEV-GGINDSG--IMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVT 986

Query: 710  RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 769
            R+S Y+ELR +L +MFGIEG+ EDPL S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 987  RYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 1046

Query: 770  ILSPEDVQKMGEQGVESFSPSSGQ 793
            ILS  +VQ+M   G  +  P + Q
Sbjct: 1047 ILSSVEVQQMSLDGDLAAIPITNQ 1070


>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1176

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 253/368 (68%), Positives = 299/368 (81%), Gaps = 4/368 (1%)

Query: 12  GHEGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP 69
           G EG+ K   +NS+LWHACAGPLV LP  G+ VVYFPQGHSEQVAA+  K+VD+H+PNYP
Sbjct: 29  GCEGEKKAPAINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYP 88

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-YFC 128
           NLP +LIC LHN+T+HAD+ETDEVYA+MTLQP++    K+     EL +   +P N +FC
Sbjct: 89  NLPSKLICLLHNITLHADLETDEVYARMTLQPVT-SYGKEALQLSELALKQARPQNEFFC 147

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLTASDTSTHGGFSVPRR+AEK+FP LDFS+QPPAQE+ ARDLHD  W FRHI+RGQPK
Sbjct: 148 KTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPK 207

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGWS+FVS KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG
Sbjct: 208 RHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIG 267

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           +LAAAAHAAA NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE  
Sbjct: 268 ILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELG 327

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            RRYMGTITGI+DLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+         
Sbjct: 328 TRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPP 387

Query: 369 FPLRLKRP 376
                KRP
Sbjct: 388 PFFGAKRP 395



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 73/93 (78%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DIS+++ Y EL++ L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1042 RTFTKVYKRGAVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDDI 1101

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1102 LLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1134


>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
          Length = 1107

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/366 (71%), Positives = 299/366 (81%), Gaps = 4/366 (1%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + K +N ELW ACAGPLV+LP  G  VVYFPQGHSEQVAA+  K+VD  +PNYP+L  +L
Sbjct: 23  EKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKL 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTAS 134
           +C LHNVT+HAD ETDEVYAQMTL P+   + KD  +  +L + S +P   +FCKTLTAS
Sbjct: 83  LCLLHNVTLHADPETDEVYAQMTLLPVLSFD-KDALLRSDLALKSNKPQPEFFCKTLTAS 141

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTT 201

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWS+FVS KRL+AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 261

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAA NS FTVF+NPRASPSEFVIPL KY KAV   ++S+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMG 321

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 373
           TITGISDLDPVRW  S WR+++VGWDEST GER+ RVS+WEIEP+   F + P  F LR 
Sbjct: 322 TITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPF-LRS 380

Query: 374 KRPWHP 379
           KRP  P
Sbjct: 381 KRPRQP 386



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 76/93 (81%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  + GW+LV+VD ENDV
Sbjct: 995  RTYTKVYKRGAVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDV 1054

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPW+ FV+ V  IKILSP++VQ+M   G
Sbjct: 1055 LLVGDDPWDDFVNCVRSIKILSPQEVQQMSLDG 1087


>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1176

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 253/368 (68%), Positives = 299/368 (81%), Gaps = 4/368 (1%)

Query: 12  GHEGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP 69
           G EG+ K   +NS+LWHACAGPLV LP  G+ VVYFPQGHSEQVAA+  K+VD+H+PNYP
Sbjct: 29  GCEGEKKAPAINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYP 88

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-YFC 128
           NLP +LIC LHN+T+HAD+ETDEVYA+MTLQP++    K+     EL +   +P N +FC
Sbjct: 89  NLPSKLICLLHNITLHADLETDEVYARMTLQPVT-SYGKEALQLSELALKQARPQNEFFC 147

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLTASDTSTHGGFSVPRR+AEK+FP LDFS+QPPAQE+ ARDLHD  W FRHI+RGQPK
Sbjct: 148 KTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPK 207

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGWS+FVS KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG
Sbjct: 208 RHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIG 267

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           +LAAAAHAAA NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE  
Sbjct: 268 ILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELG 327

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            RRYMGTITGI+DLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+         
Sbjct: 328 TRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPP 387

Query: 369 FPLRLKRP 376
                KRP
Sbjct: 388 PFFGAKRP 395



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 73/93 (78%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DIS+++ Y EL++ L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1042 RTFTKVYKRGAVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDDI 1101

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1102 LLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1134


>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
 gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
          Length = 949

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 249/369 (67%), Positives = 294/369 (79%), Gaps = 4/369 (1%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q   G  K +NSELWHACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPN
Sbjct: 34  QDQSGARKAINSELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPN 93

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCK 129
           LP QL+CQ+ NVT+HAD ++DE+YAQM+LQP++ E  KD F+  + G+ PSK P  +FCK
Sbjct: 94  LPSQLMCQVQNVTLHADKDSDEIYAQMSLQPVNSE--KDVFLVPDFGLRPSKHPNEFFCK 151

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LD+++QPP QELI RDLHD  W FRHI+RGQPKR
Sbjct: 152 TLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKR 211

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R  T +PSSVLS+DSMHIG+
Sbjct: 212 HLLTTGWSLFVGAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGV 271

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA  S FT+F+NPRA PSEFVIPL KY K V+ T++S GMRF M+FETEES  
Sbjct: 272 LAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGK 331

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTI GISDLDP+RW  S WR+++V WDE    ++Q RVS WEIE   +  ++PSL 
Sbjct: 332 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIETPESLFIFPSLT 391

Query: 370 PLRLKRPWH 378
              LKRP H
Sbjct: 392 S-GLKRPLH 399



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/155 (47%), Positives = 98/155 (63%), Gaps = 11/155 (7%)

Query: 653 VSSMPLGDS------GFHNSMYG---CMQDSSE--LLHNVGQIDQLTPTRTFVKVYKSGS 701
           ++S  LGDS       FH++  G   C  D  E  LL N      + P RT+ KV K+GS
Sbjct: 786 ITSASLGDSQAFSRQEFHDNSAGTSSCNVDFDEGSLLQNGSWKQVVPPLRTYTKVQKAGS 845

Query: 702 VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 761
           VGRS+D++ F +Y+EL   +  MFG+EG   DP  SGW+LV+VD ENDVLL+GDDPWE F
Sbjct: 846 VGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDVLLIGDDPWEEF 905

Query: 762 VSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRAN 796
           VS V  I+ILSP +VQ+M E+G++  + +  Q  N
Sbjct: 906 VSCVRCIRILSPSEVQQMSEEGMKLLNSAMMQGIN 940


>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
 gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
          Length = 958

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 276/443 (62%), Positives = 328/443 (74%), Gaps = 15/443 (3%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE--VDSHIPNYPNLP 72
           G+ K +N+ LW  CAGPLV+LPTVG+ VVYFPQGHSEQV A+T ++  V++ IPNYP+LP
Sbjct: 7   GEKKAMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPSLP 66

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 132
             LIC LHN+T+HAD +TDEVYAQMTLQP+  +  K+ F+  +LGI  KQ T  FCKTLT
Sbjct: 67  AHLICHLHNITLHADPDTDEVYAQMTLQPV--QNDKEPFLTPDLGIQPKQQTLSFCKTLT 124

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFS+PRRAAEKVFP LDF+ QPPAQEL+A+DLH+ +W FRHI+RGQP+RHLL
Sbjct: 125 ASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLL 184

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWSVFVSAKRL AGD+VLFI +E N LLLGIRRA R    +PSS+LSSDSM IG+LAA
Sbjct: 185 TTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAA 244

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAA TNS FT+F+NPRAS SEFV+P  ++ KA +H RV+VGMRFRM  ETE+SS RRY
Sbjct: 245 AAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRY 304

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYPSLFP 370
           MGTITGI DLD VRW NS WR++KVGWDESTAG+RQ RVSLWEIEPLT   FP   SLF 
Sbjct: 305 MGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQRRVSLWEIEPLTAPYFPCTSSLF- 363

Query: 371 LRLKRPWHPSTSSFN----DNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWM--QQR 424
           LR KR       SF     D  D   S + W R   G+  +  LN   L +  W+  Q +
Sbjct: 364 LR-KRTRLDGMLSFCAGELDELDAIRSQV-WARAEDGKMDIRALNAAGLSLEHWLRFQHK 421

Query: 425 VEPSFLGNDHNQQYQAMLAAGMQ 447
            E +         Y+AM A  +Q
Sbjct: 422 PEAAIATASQPDYYRAMAAQALQ 444



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 11/129 (8%)

Query: 688 TPTRTFVKV-YKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF-EDPLRSGWQLVFVD 745
           +P RTF KV YK+GSVGRS+D++R  +Y ELR ++ +MF +EG+   D  RS WQLVFVD
Sbjct: 819 SPMRTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVD 878

Query: 746 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR---------AN 796
            E DVLL+GDDPWE FV  V +IKILSP +VQ++  + +ES +    QR         AN
Sbjct: 879 YEGDVLLVGDDPWEEFVGCVRFIKILSPSEVQQLNRENLESIAAVPNQRQTSSSSDDCAN 938

Query: 797 SRGNCGRDP 805
              N  +DP
Sbjct: 939 PTNNFAQDP 947


>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
          Length = 934

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 250/367 (68%), Positives = 295/367 (80%), Gaps = 4/367 (1%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q H G  K LNSELWHACAGPLVSLP VG+ V YFPQGHSEQVAA+T +   S IPNYPN
Sbjct: 35  QEHSGVRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPN 94

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCK 129
           LP QL+CQ+ N T+HAD ETDE+YAQMTLQPL+ E  ++ F   + G+  SK P+ +FCK
Sbjct: 95  LPSQLLCQVQNATLHADKETDEIYAQMTLQPLNSE--REVFPISDFGLKHSKHPSEFFCK 152

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LD+++QPP QEL+ RDLHD  W FRHI+RGQPKR
Sbjct: 153 TLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKR 212

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FV +KRL AGDSVLFI +EK+QL +G+RR  R  T +PSSVLS+DSMHIG+
Sbjct: 213 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGV 272

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA  S FT+F+NPRA PSEFVIPL KY K+VF T+VSVGMRF M+FETEES  
Sbjct: 273 LAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGK 332

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTI GISD+DP+RW  S WR+++V WDE   G++Q RVS+WEIE   +  ++PSL 
Sbjct: 333 RRYMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPESLFIFPSLT 392

Query: 370 PLRLKRP 376
              LKRP
Sbjct: 393 S-GLKRP 398



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 80/124 (64%)

Query: 673 DSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFE 732
           D S  L N        P RT+ KV K+GSVGRS+D++ F +Y EL   +  MFG++G   
Sbjct: 810 DESSFLQNNSWQQVPAPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLN 869

Query: 733 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
           D   SGW+LV+VD E+DVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++  +  + 
Sbjct: 870 DTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGAL 929

Query: 793 QRAN 796
           Q  N
Sbjct: 930 QGMN 933


>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
 gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
          Length = 1143

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/353 (71%), Positives = 294/353 (83%), Gaps = 4/353 (1%)

Query: 12  GHEGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP 69
           G EG+ K   +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD H+P+YP
Sbjct: 22  GCEGEKKAPPINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDGHVPSYP 81

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFC 128
           NLP +LIC LHNVT+HAD ETDEVYAQMTL P++    K+     EL +   +P T +FC
Sbjct: 82  NLPSKLICLLHNVTLHADPETDEVYAQMTLLPVT-SYGKEALQLSELALKQPRPQTEFFC 140

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE+ ARDLHD  W FRHI+RGQPK
Sbjct: 141 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPK 200

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGWS+FVS KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG
Sbjct: 201 RHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIG 260

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           +LAAAAHAAA NS FT+F+NPRASP+EFV+P  KY KA++  ++S+GMRFRM+FETEE  
Sbjct: 261 ILAAAAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELG 320

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
            RRYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+  
Sbjct: 321 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 373



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 73/93 (78%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DIS+F+ Y+EL+  L +MF +EG+ E+  R GW+LV+ D E+D+
Sbjct: 1010 RTFTKVYKRGAVGRSIDISQFNGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDDI 1069

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1070 LLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1102


>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
          Length = 954

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/369 (66%), Positives = 292/369 (79%), Gaps = 4/369 (1%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q H G  K +NSELWHACAGPLV LP VG+   YFPQGHSEQVA +T +   S IPNYPN
Sbjct: 34  QDHSGSRKAINSELWHACAGPLVCLPQVGSLSYYFPQGHSEQVAVSTKRTATSQIPNYPN 93

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCK 129
           LP QL+CQ+ NVT+HAD ETDE+YAQM+L+P++ E  KD F   + G+ PSK P+ +FCK
Sbjct: 94  LPSQLLCQVQNVTLHADKETDEIYAQMSLKPVNSE--KDVFPVPDFGLKPSKHPSEFFCK 151

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LDF++QPP+QEL+ RDLHD  W FRHI+RGQPKR
Sbjct: 152 TLTASDTSTHGGFSVPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQPKR 211

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FV AKRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+
Sbjct: 212 HLLTTGWSLFVGAKRLRAGDSVLFIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMHIGV 271

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA  S FT+F+NPRA PSEFVIPL  Y KA++ T++SVGMRF M+FETEES  
Sbjct: 272 LAAAAHAAANRSPFTIFYNPRACPSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEESGK 331

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTI   SDLDP+RW  S WR+++V WDE    ++Q RVS WEIE      ++PSL 
Sbjct: 332 RRYMGTIVSTSDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIETPENIFIFPSLT 391

Query: 370 PLRLKRPWH 378
              LKRP H
Sbjct: 392 S-SLKRPSH 399



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 1/125 (0%)

Query: 673 DSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF 731
           D S LL N G   Q+ P  RT+ KV K+GSVGRS+D++ F +Y EL   +  MFG+EG  
Sbjct: 821 DESSLLQNNGSWHQVVPPVRTYTKVQKTGSVGRSIDVTSFKNYEELCSAIECMFGLEGLL 880

Query: 732 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSS 791
            DP  SGW+LV+VD ENDVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++  + ++
Sbjct: 881 NDPRGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGIKLLNSAA 940

Query: 792 GQRAN 796
            Q  N
Sbjct: 941 MQGIN 945


>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
          Length = 929

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 250/367 (68%), Positives = 295/367 (80%), Gaps = 4/367 (1%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q H G  K LNSELWHACAGPLVSLP VG+ V YFPQGHSEQVAA+T +   S IPNYPN
Sbjct: 32  QEHSGVRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPN 91

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCK 129
           LP QL+CQ+ NVT+HAD ETDE+YAQMTLQPL+ E  ++ F   + G   SK P+ +FCK
Sbjct: 92  LPYQLLCQVQNVTLHADKETDEIYAQMTLQPLNSE--REVFPISDFGHKHSKHPSEFFCK 149

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LD+++QPP QEL+ RDLHD  W FRHI+RGQPKR
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKR 209

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FV +KRL AGDSVLFI +E++QL +G+RR  R  T +PSSVLS+DSMHIG+
Sbjct: 210 HLLTTGWSLFVGSKRLRAGDSVLFIRDERSQLRVGVRRVNRQQTTLPSSVLSADSMHIGV 269

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAAA  S FT+F+NPRA PSEFVIPL KY K+VF T+VSVGMRF M+FETEES  
Sbjct: 270 LAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGK 329

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTI GISD+DP+RW  S WR+++V WDE   G++Q RVS+WEIE   +  ++PSL 
Sbjct: 330 RRYMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPESLFIFPSLT 389

Query: 370 PLRLKRP 376
              LKRP
Sbjct: 390 S-GLKRP 395



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 80/124 (64%)

Query: 673 DSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFE 732
           D S  L N        P RT+ KV K+GSVGRS+D++ F +Y EL   +  MFG++G   
Sbjct: 805 DESSFLQNNSWQQVPAPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLN 864

Query: 733 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
           D   SGW+LV+VD E+DVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++  +  + 
Sbjct: 865 DTKCSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGAL 924

Query: 793 QRAN 796
           Q  N
Sbjct: 925 QGMN 928


>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
 gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
          Length = 1143

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 284/505 (56%), Positives = 350/505 (69%), Gaps = 28/505 (5%)

Query: 14  EGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           EG+ K   +N++LW+ACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K++D+H+P+YPNL
Sbjct: 29  EGERKAPAINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNL 88

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKT 130
           P +LIC LH+VT+HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKT
Sbjct: 89  PSKLICLLHSVTLHADPDTDEVYAQMTLQPVN-TYGKEALQLSELALKHARPQMEFFCKT 147

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+ P LDFS+QPPAQEL ARD+HD  W FRHIFRGQPKRH
Sbjct: 148 LTASDTSTHGGFSVPRRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFRHIFRGQPKRH 207

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FV  KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+L
Sbjct: 208 LLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVL 267

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAAHAAA NS FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM+FETEE  +R
Sbjct: 268 AAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGMR 327

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLF 369
           RYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P  F
Sbjct: 328 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPF 387

Query: 370 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQRVEP 427
              +KRP      S ++  +     + WL      +   T N     L +  WM      
Sbjct: 388 -FGVKRPRQIDDES-SEMENLFKRAMPWLGEEICIKDAQTQNTTMPGLSLVQWM------ 439

Query: 428 SFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQN-PLQLKQQQHLLQQ 486
               N + QQ   +   G+QS     +    L  P   +Q  G+     QL  Q HLLQQ
Sbjct: 440 ----NMNRQQSSTLANTGIQS-----EYLRSLSNP--AMQNLGAAELARQLYVQNHLLQQ 488

Query: 487 LNSQAE-DRAQQQQQPQQHMYHDAL 510
            + Q    +  QQ QP   +   +L
Sbjct: 489 NSVQLNASKLPQQMQPINELAKGSL 513



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 72/93 (77%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DI RFS Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 1010 RTFTKVYKRGAVGRSIDIGRFSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 1069

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1070 LLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1102


>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
          Length = 1139

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 286/491 (58%), Positives = 348/491 (70%), Gaps = 21/491 (4%)

Query: 14  EGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           EG+ K   +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNL
Sbjct: 30  EGERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNL 89

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKT 130
           P +LIC LH V +HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKT
Sbjct: 90  PSKLICLLHGVNLHADPDTDEVYAQMTLQPVN-TYGKEALQISELALKQARPQMEFFCKT 148

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARD+HD  W FRHI+RGQPKRH
Sbjct: 149 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRH 208

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FVS KRL AGDSV+ + +EK+QLLLGIRRA R PT + SSVLSSDSMHIG+L
Sbjct: 209 LLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVL 268

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAAHAAA +S FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM+FETEE   R
Sbjct: 269 AAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTR 328

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLF 369
           RYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P  F
Sbjct: 329 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPF 388

Query: 370 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQS--LGMFPWMQ-QRVE 426
              +KRP      S  +N  + A  + WL      +     N  +  L +  WM   R +
Sbjct: 389 -FGVKRPRQLDDESEMENLFKRA--MPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQ 445

Query: 427 PSFLGNDHNQQ--YQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQ-NPLQLKQQ 480
            S L N   Q    QA+    MQ   + +  RQ ++Q       LQQ+  Q N  +L QQ
Sbjct: 446 SSSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQ----NNLLQQNCIQFNSPKLPQQ 501

Query: 481 QHLLQQLNSQA 491
              +  L+  A
Sbjct: 502 MQTMNDLSKAA 512



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 1006 RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 1065

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1066 LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1098


>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
          Length = 1142

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 286/491 (58%), Positives = 348/491 (70%), Gaps = 21/491 (4%)

Query: 14  EGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           EG+ K   +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNL
Sbjct: 33  EGERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNL 92

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKT 130
           P +LIC LH V +HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKT
Sbjct: 93  PSKLICLLHGVNLHADPDTDEVYAQMTLQPVN-TYGKEALQISELALKQARPQMEFFCKT 151

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARD+HD  W FRHI+RGQPKRH
Sbjct: 152 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRH 211

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FVS KRL AGDSV+ + +EK+QLLLGIRRA R PT + SSVLSSDSMHIG+L
Sbjct: 212 LLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVL 271

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAAHAAA +S FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM+FETEE   R
Sbjct: 272 AAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTR 331

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLF 369
           RYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P  F
Sbjct: 332 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPF 391

Query: 370 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQS--LGMFPWMQ-QRVE 426
              +KRP      S  +N  + A  + WL      +     N  +  L +  WM   R +
Sbjct: 392 -FGVKRPRQLDDESEMENLFKRA--MPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQ 448

Query: 427 PSFLGNDHNQQ--YQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQ-NPLQLKQQ 480
            S L N   Q    QA+    MQ   + +  RQ ++Q       LQQ+  Q N  +L QQ
Sbjct: 449 SSSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQ----NNLLQQNCIQFNSPKLPQQ 504

Query: 481 QHLLQQLNSQA 491
              +  L+  A
Sbjct: 505 MQTMNDLSKAA 515



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 1009 RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 1068

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1069 LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1101


>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
          Length = 1088

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/361 (70%), Positives = 297/361 (82%), Gaps = 5/361 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 21  VNQELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 80

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQP-TNYFCKTLTASDT 136
           HNVTM AD +TDEVYA+MTLQP+S   Q  K+  +  E+ +   +P T +FCKTLTASDT
Sbjct: 81  HNVTMEADPDTDEVYARMTLQPVSNVTQCDKEILLASEIALKQSRPQTEFFCKTLTASDT 140

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSVPRRAAE++FP LDFSLQPPAQEL ARDLHD  W FRHIFRGQPKRHLLTTGW
Sbjct: 141 STHGGFSVPRRAAERIFPQLDFSLQPPAQELQARDLHDNTWTFRHIFRGQPKRHLLTTGW 200

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           S+F+S KRL+AGDSVLFI + K+QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHA
Sbjct: 201 SLFISGKRLLAGDSVLFIRDGKHQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHA 260

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
           AA NS FT+F+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTI
Sbjct: 261 AANNSQFTIFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESGTRRYMGTI 320

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS-LFPLRLK 374
           TGISDLDPVRW +S WRS++V WDE+   ER+ RVSLWEIEP+   F +YPS LF  +  
Sbjct: 321 TGISDLDPVRWKSSQWRSIQVAWDEAAPTERRTRVSLWEIEPVIAPFFIYPSPLFTAKRA 380

Query: 375 R 375
           R
Sbjct: 381 R 381



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 112/212 (52%), Gaps = 35/212 (16%)

Query: 602  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSVDPGVSSM 656
            PSS N     +D     E   TD +N+++FGV+ID   L LP    +   TS++      
Sbjct: 853  PSSLNQHQLLRDTVPDNEFEVTDPRNNLLFGVNIDGQ-LGLPLNADALLATSIENDKFMD 911

Query: 657  PLGDSGFHNSMYGCMQ----DSSELLHNVGQIDQL----------TP------------- 689
             +  +G  N M          SS + H+ G  D            TP             
Sbjct: 912  QMAGNGISNYMSSKESQQEISSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRAPAPAH 971

Query: 690  --TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRE 747
               RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E
Sbjct: 972  QRMRTYTKVHKRGAVGRSIDINRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHE 1031

Query: 748  NDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
             DVLL+GDDPWE F++ V  I+ILSP++  +M
Sbjct: 1032 KDVLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1063


>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1083

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 293/545 (53%), Positives = 356/545 (65%), Gaps = 62/545 (11%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 20  VNQELWYACAGPLVALPPPGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 79

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQP-TNYFCKTLTASDT 136
           H+VTM +D ETDEVYA+MTLQP+S   Q  K+  +  EL +   +P T +FCKTLTASDT
Sbjct: 80  HSVTMQSDPETDEVYARMTLQPVSNVTQCDKEILLASELALKQNKPQTEFFCKTLTASDT 139

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSVPRRAAE++FP LDFSLQPPAQEL ARDLHD  W FRHIFRGQPKRHLLTTGW
Sbjct: 140 STHGGFSVPRRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQPKRHLLTTGW 199

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           S+F+S KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHA
Sbjct: 200 SLFISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHA 259

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
           AA NS FT+F+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTI
Sbjct: 260 AANNSQFTIFYNPRASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTI 319

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPL-RLK 374
           TGISDLDPVRW NS WR+++V WDE+   ER+ RVSLW+IEP+   F +YP+  PL   K
Sbjct: 320 TGISDLDPVRWKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIAPFFIYPT--PLFTAK 377

Query: 375 RPWHPSTSSFNDNRDETASGLN--------WLRGGTGEQGLTTLNFQSLGM-----FPWM 421
           R   P         D+  SG++        WL     ++ + T N    G+       WM
Sbjct: 378 RARQPGMI------DDDTSGMDNLFKRTMPWLGEEICKKDMNTQNSIVPGLNLAQSVQWM 431

Query: 422 QQR---------VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQ 472
             +         ++P  L +   +  Q + AA +      + QF+Q             Q
Sbjct: 432 NMQQNLSLAGTVMQPELLNSLAGKHVQNLSAADISRQISFQPQFLQ-------------Q 478

Query: 473 NPLQLKQQQHLLQQLNSQAEDRAQQQQQPQ------------QHMYHDALQIRTDELLQR 520
           N +Q      LL Q N QAE  A+    P             Q  Y D  Q    + +Q 
Sbjct: 479 NNIQFDTS--LLPQQNQQAEQLAKAIATPNQLENIMAPQKVDQDCYSDQKQRAVTQTVQG 536

Query: 521 QQSNL 525
            Q+NL
Sbjct: 537 SQANL 541



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 35/204 (17%)

Query: 608  KDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSVDPGVSSMPLGDSGFHNS 666
            +D A  +E   +D  N+++FGV+ID   L LP    +    S++       +  +G  N 
Sbjct: 858  RDTAPDSEFEISDPTNNLLFGVNIDGQ-LGLPLNADALLANSIENDKFMDEMAGNGISN- 915

Query: 667  MYGCMQDSSELL------HNVG-------QIDQLTP------------------TRTFVK 695
             Y   +DS + L      H++G        ID  T                    RT+ K
Sbjct: 916  -YISSKDSQQELSSSMISHSLGVADMGFNSIDSATNDPPFLNRNSRAPAPAHQRMRTYTK 974

Query: 696  VYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGD 755
            V+K G+VGRS+D++R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E DVLL+GD
Sbjct: 975  VHKRGAVGRSIDMNRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKDVLLVGD 1034

Query: 756  DPWEAFVSNVWYIKILSPEDVQKM 779
            DPWE F++ V  I+ILSP++  +M
Sbjct: 1035 DPWEDFLNCVRCIRILSPQEEMQM 1058


>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
 gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
          Length = 1095

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/456 (58%), Positives = 330/456 (72%), Gaps = 18/456 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 24  VNQELWYACAGPLVTLPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLPSKLICIL 83

Query: 80  HNVTMHADVETDEVYAQMTLQPLS--PEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDT 136
            +VTM AD +TDEVYA+MTLQP+S      K+T +  +L +   +P T +FCKTLTASDT
Sbjct: 84  RSVTMLADPDTDEVYARMTLQPVSNVTHCDKETLLASDLALKQTRPQTEFFCKTLTASDT 143

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGW
Sbjct: 144 STHGGFSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGW 203

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           S+FVS KRL+AGDSVLFI + + QLLLGIRRA R P  + SSVLSSDSMHIG+LAAAAHA
Sbjct: 204 SLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHA 263

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
           AA NS FTVF+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES+ RRYMGTI
Sbjct: 264 AANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 323

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 375
           TGISD+DPVRW NS WR+++V WDE+   ER+ RVSLWE+EP+   F +YPS      KR
Sbjct: 324 TGISDMDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVIAPFFIYPSPL-FTAKR 382

Query: 376 PWHPSTSSFNDNRDET--ASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQR------- 424
           P  P  +  + +  +T     + W     G++ L+T N     L +  WM  +       
Sbjct: 383 PRQPGITDDDSSEMDTLFKRTMPWFGEEIGKKDLSTQNSLVPGLSLVQWMNMQQTSSLTS 442

Query: 425 --VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 458
             ++P  L +   +  Q + AA +      + QF+Q
Sbjct: 443 TVMQPELLNSLAGKPVQTLAAADLSRQISFQPQFLQ 478



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 49/89 (55%), Positives = 70/89 (78%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R  W+LV+ D E DV
Sbjct: 977  RTYTKVHKRGAVGRSIDINRYSGYDELKHDIARMFGIEGQLSDQNRVCWKLVYEDHEKDV 1036

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            LL+GDDPWE FV+ V  I+ILSP++ ++M
Sbjct: 1037 LLVGDDPWEDFVNCVRCIRILSPQEERQM 1065


>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
           Full=Auxin-responsive protein IAA21/IAA23/IAA25;
           AltName: Full=Protein BIPOSTO; AltName: Full=Protein
           NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
           TRANSPORT INHIBITOR RESPONSE 5
 gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
 gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
 gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1164

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/423 (61%), Positives = 321/423 (75%), Gaps = 11/423 (2%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S++G+     EG+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D 
Sbjct: 5   SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQ 122
            IP+YPNLP +LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++Q
Sbjct: 64  FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQ 122

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
           P  +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI
Sbjct: 123 PNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHI 182

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SS
Sbjct: 183 YRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISS 242

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
           DSMHIG+LAAAAHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+F
Sbjct: 243 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIF 301

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           ETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T 
Sbjct: 302 ETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT- 360

Query: 363 PMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMF 418
           P Y  + P    RP         D+  +  S L     WL      +  ++  F  L + 
Sbjct: 361 PFY--ICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLV 418

Query: 419 PWM 421
            WM
Sbjct: 419 QWM 421



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1037 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1096

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 802
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1097 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1147


>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1164

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/423 (61%), Positives = 321/423 (75%), Gaps = 11/423 (2%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S++G+     EG+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D 
Sbjct: 5   SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQ 122
            IP+YPNLP +LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++Q
Sbjct: 64  FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQ 122

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
           P  +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI
Sbjct: 123 PNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHI 182

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SS
Sbjct: 183 YRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISS 242

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
           DSMHIG+LAAAAHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+F
Sbjct: 243 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIF 301

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           ETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T 
Sbjct: 302 ETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT- 360

Query: 363 PMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMF 418
           P Y  + P    RP         D+  +  S L     WL      +  ++  F  L + 
Sbjct: 361 PFY--ICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLV 418

Query: 419 PWM 421
            WM
Sbjct: 419 QWM 421



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1037 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1096

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 802
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1097 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1147


>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
          Length = 1116

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/459 (60%), Positives = 330/459 (71%), Gaps = 25/459 (5%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +N ELW+ACAGPLVSLP  G+ +VYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 22  VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 81

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQP-TNYFCKTLTASDT 136
           H+VTM AD +TDEVYA+MTLQP+S   Q  K+T +  EL +   +P T +FCKTLTASDT
Sbjct: 82  HSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDT 141

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGW
Sbjct: 142 STHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGW 201

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           S+FVS KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHA
Sbjct: 202 SLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHA 261

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
           AA NS FT+++NPRAS SEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTI
Sbjct: 262 AANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTI 321

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS-LFPLRLK 374
           TGISDLDPVRW  SHWR+++V WDE+   ER+ RVSLWEIEP+   F +YPS LF    K
Sbjct: 322 TGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLF--TAK 379

Query: 375 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQS-----LGMFPWMQQR---- 424
           RP  P  +   D+  E    L       GE+     LN Q+     L +  WM  +    
Sbjct: 380 RPRLPGMT---DDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSS 436

Query: 425 -----VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 458
                V+P  L +   +  Q + AA +        QF+Q
Sbjct: 437 LPGTVVQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQ 475



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 129/238 (54%), Gaps = 37/238 (15%)

Query: 602  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSS-GLLLPTTVSSFTTSVDPGVSSM 656
            PSS++     KD    +E   TD +N+++FGV+ID   GL L   + +     D  +  +
Sbjct: 876  PSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQL 935

Query: 657  P-LGDSGFHNSMYGCMQDSSELL-HNVGQIDQL----------TP--------------- 689
            P  G S F +S     + SS ++ H+ G  D            TP               
Sbjct: 936  PGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQ 995

Query: 690  -TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
              RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E 
Sbjct: 996  RMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEK 1055

Query: 749  DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 803
            DVLL+GDDPWE FV  V  I+ILSP++  +M   G+ G +SF P+    ++  G+  R
Sbjct: 1056 DVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFG-DSFLPNQACSSSDGGHPWR 1112


>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
          Length = 1100

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/423 (61%), Positives = 321/423 (75%), Gaps = 11/423 (2%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S++G+     EGD + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D 
Sbjct: 5   SSNGVSPNPVEGDRRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQ 122
            IP+YPNLP +LIC L NVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++Q
Sbjct: 64  FIPSYPNLPSKLICMLQNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQ 122

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
           P  +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI
Sbjct: 123 PNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHI 182

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SS
Sbjct: 183 YRGQPKRHLLTTGWSVFVSNKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISS 242

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
           DSMHIG+LAAAAHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+F
Sbjct: 243 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIF 301

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           ETEE  VRRYMGT+TGISDLDPVRW +S WR++++GWDES AG+R  RVS+W+IEP+ T 
Sbjct: 302 ETEECGVRRYMGTVTGISDLDPVRWKSSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT- 360

Query: 363 PMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMF 418
           P Y  + P    RP         D+  +  S L     WL  G   +  ++  F  L + 
Sbjct: 361 PFY--ICPPPFFRPRFAGQPGMPDDETDMESALKRAMPWLDNGLEMKDSSSSIFPGLSLV 418

Query: 419 PWM 421
            WM
Sbjct: 419 QWM 421



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 973  RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1032

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 802
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1033 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1083


>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
 gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
 gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
          Length = 1096

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 273/456 (59%), Positives = 328/456 (71%), Gaps = 22/456 (4%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +N ELW+ACAGPLVSLP  G+ +VYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 5   VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 64

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTST 138
           H+VTM AD +TDEVYA+MTLQP+S  + K+T +  EL +   +P T +FCKTLTASDTST
Sbjct: 65  HSVTMLADPDTDEVYARMTLQPVSNCD-KETLLASELALKQTRPQTEFFCKTLTASDTST 123

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS+
Sbjct: 124 HGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 183

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA
Sbjct: 184 FVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 243

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
            NS FT+++NPRAS SEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTITG
Sbjct: 244 NNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITG 303

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRPW 377
           ISDLDPVRW  SHWR+++V WDE+   ER+ RVSLWEIEP+   F +YPS      KRP 
Sbjct: 304 ISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPL-FTAKRPR 362

Query: 378 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQS-----LGMFPWMQQR------- 424
            P  +   D+  E    L       GE+     LN Q+     L +  WM  +       
Sbjct: 363 LPGMT---DDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPG 419

Query: 425 --VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 458
             V+P  L +   +  Q + AA +        QF+Q
Sbjct: 420 TVVQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQ 455



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 129/238 (54%), Gaps = 37/238 (15%)

Query: 602  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSS-GLLLPTTVSSFTTSVDPGVSSM 656
            PSS++     KD    +E   TD +N+++FGV+ID   GL L   + +     D  +  +
Sbjct: 856  PSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQL 915

Query: 657  P-LGDSGFHNSMYGCMQDSSELL-HNVGQIDQL----------TP--------------- 689
            P  G S F +S     + SS ++ H+ G  D            TP               
Sbjct: 916  PGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQ 975

Query: 690  -TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
              RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E 
Sbjct: 976  RMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEK 1035

Query: 749  DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 803
            DVLL+GDDPWE FV  V  I+ILSP++  +M   G+ G +SF P+    ++  G+  R
Sbjct: 1036 DVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFG-DSFLPNQACSSSDGGHPWR 1092


>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
          Length = 1085

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/455 (58%), Positives = 327/455 (71%), Gaps = 17/455 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNL  +LIC L
Sbjct: 21  VNEELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICIL 80

Query: 80  HNVTMHADVETDEVYAQMTLQPLS--PEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDT 136
            +VTM AD +TDEVYA+MTLQP+S      K+T +  EL +   +P T +FCKTLTASDT
Sbjct: 81  RSVTMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDT 140

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGW
Sbjct: 141 STHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGW 200

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           S+FVS KRL+AGDSVLFI + + QLLLGIRRA R P  + SSVLSSDSMHIG+LAAAAHA
Sbjct: 201 SLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHA 260

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
           AA NS FTVF+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES+ RRYMGTI
Sbjct: 261 AANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 320

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 375
           TGISD+DP+RW NS WR+++V WDE+   ER+ RVSLWE+EP+   F +YPS      KR
Sbjct: 321 TGISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPL-FTAKR 379

Query: 376 PWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQR-------- 424
           P  P  +  +   D      + W     G++ L+T N     L +  WM  +        
Sbjct: 380 PRQPGVTDDSSEMDNLFKRTMPWFGEEVGKRDLSTQNGLVPGLSLVQWMNMQHNPSLANT 439

Query: 425 -VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 458
            ++P  L +   +  Q + AA +      + QF+Q
Sbjct: 440 VMQPELLNSLAGKPVQTLAAADLSRQISFQPQFLQ 474



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 119/213 (55%), Gaps = 38/213 (17%)

Query: 602  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHID------SSGLLLPTT---------- 641
            PSS+N     ++A   +E   TD+ N+ +FG +ID      +   LL T           
Sbjct: 846  PSSFNQHQPLREAVPDSEFEVTDAGNNFLFGANIDGHMEPLNEDDLLGTAFEADKYMEQM 905

Query: 642  ----VSSFTTSVDP------GVSSMPLG--DSGFHNSMYGCMQDSSELLHNV---GQIDQ 686
                +S++ +S D        + S P G  D  F NS+   + D   L  N    G + Q
Sbjct: 906  PGNGISNYISSKDSQQELSSSMISHPFGVADIAF-NSIDSSINDIQFLNRNSRAPGPVQQ 964

Query: 687  LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
                RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D 
Sbjct: 965  RM--RTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDH 1022

Query: 747  ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            E DVLL+GDDPWE FV+ V  I+ILSP++ ++M
Sbjct: 1023 EKDVLLVGDDPWEDFVNCVRCIRILSPQEERQM 1055


>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1099

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/367 (67%), Positives = 297/367 (80%), Gaps = 4/367 (1%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G  G+ K +N+ELW ACAGPL++LP+ GT VVYFPQGHSEQVAA+  K+VD+ +PNY NL
Sbjct: 17  GEGGEKKTINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNL 76

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKT 130
           P ++ C LHNVT+HAD +TDEVYAQMTLQP+ P    D  +  ++ + S +P   +FCK 
Sbjct: 77  PSKIPCLLHNVTLHADPDTDEVYAQMTLQPV-PSFDTDALLRSDIFLRSSKPQPEFFCKQ 135

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+FP LD+S+QPPAQEL+ARDLHD  W+FRHI+RGQPKRH
Sbjct: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDYSVQPPAQELVARDLHDNVWRFRHIYRGQPKRH 195

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+F+  KRL+AGDSVLF+ +EK QLLLGIRRA R P+ + SSVLSSDSMHIG+L
Sbjct: 196 LLTTGWSLFIGGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVL 255

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAA A A NS FTVF+NPRASPSEFVIPL KY KAV+   +S GMRFRM+FETE+S  R
Sbjct: 256 AAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYSKAVYSHHISPGMRFRMMFETEDSGTR 315

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYPSL 368
           RYMGTI G+SDLD VRW NS WR+++VGWDESTA ERQ RVS+WEIEP+TT  F   P  
Sbjct: 316 RYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEERQSRVSVWEIEPVTTPYFICPPPF 375

Query: 369 FPLRLKR 375
           F  ++ R
Sbjct: 376 FRSKIPR 382



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 74/93 (79%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KVYK G+VGRS+DI+R+S Y +L+++L   FGIEG+ ED  R GW+LV+VD ENDV
Sbjct: 987  RTYTKVYKRGAVGRSIDITRYSGYEDLKQDLALRFGIEGQLEDLQRIGWKLVYVDHENDV 1046

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1047 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1079


>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
 gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
          Length = 1113

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/457 (59%), Positives = 329/457 (71%), Gaps = 24/457 (5%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +N ELW+ACAGPLVSLP  G+ +VYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 22  VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 81

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTST 138
           H+VTM AD +TDEVYA+MTLQP++ +  K+T +  EL +   +P T +FCKTLTASDTST
Sbjct: 82  HSVTMLADPDTDEVYARMTLQPVT-QCDKETLLASELALKQTRPQTEFFCKTLTASDTST 140

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS+
Sbjct: 141 HGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 200

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA
Sbjct: 201 FVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 260

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
            NS FT+++NPRAS SEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTITG
Sbjct: 261 NNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITG 320

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS-LFPLRLKRP 376
           ISDLDPVRW  SHWR+++V WDE+   ER+ RVSLWEIEP+   F +YPS LF    KRP
Sbjct: 321 ISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLF--TAKRP 378

Query: 377 WHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQS-----LGMFPWMQQR------ 424
             P      D+  E    L       GE+     LN Q+     L +  WM  +      
Sbjct: 379 RLP---GMTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLP 435

Query: 425 ---VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 458
              V+P  L +   +  Q + AA +        QF+Q
Sbjct: 436 GTVVQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQ 472



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 129/238 (54%), Gaps = 37/238 (15%)

Query: 602  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSS-GLLLPTTVSSFTTSVDPGVSSM 656
            PSS++     KD    +E   TD +N+++FGV+ID   GL L   + +     D  +  +
Sbjct: 873  PSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQL 932

Query: 657  P-LGDSGFHNSMYGCMQDSSELL-HNVGQIDQL----------TP--------------- 689
            P  G S F +S     + SS ++ H+ G  D            TP               
Sbjct: 933  PGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQ 992

Query: 690  -TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
              RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E 
Sbjct: 993  RMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEK 1052

Query: 749  DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 803
            DVLL+GDDPWE FV  V  I+ILSP++  +M   G+ G +SF P+    ++  G+  R
Sbjct: 1053 DVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFG-DSFLPNQACSSSDGGHPWR 1109


>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1110

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 292/542 (53%), Positives = 366/542 (67%), Gaps = 32/542 (5%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           E   K +N ELW ACAGPLV+LP  GT V+YFPQGHSEQVAA+ NK+  S IPNYPNLP 
Sbjct: 16  EEKKKSINPELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLNKDPHSQIPNYPNLPS 75

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLT 132
           +L+C LHN+T+ AD ETDEVYAQ+TLQP+ P   KD  +  +L + S +P  ++FCK LT
Sbjct: 76  KLLCLLHNLTLLADPETDEVYAQITLQPV-PSFDKDALLRSDLALKSSKPQPDFFCKQLT 134

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAA+K+FP LD+S+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLL
Sbjct: 135 ASDTSTHGGFSVPRRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPKRHLL 194

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS+FVS KRL+AGDSVLFI +EK  LLLGIRRA R PT + SSVLSSDSMHIG+LAA
Sbjct: 195 TTGWSLFVSGKRLLAGDSVLFIRDEKQHLLLGIRRANRQPTNISSSVLSSDSMHIGILAA 254

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAAA NS FTVF+NPR SPSEFVIPL KY K+V+  + S+GMRFRM+FETE+S  RRY
Sbjct: 255 AAHAAANNSPFTVFYNPRTSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRY 314

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           MGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVSLWEIEP+T           R
Sbjct: 315 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFFICPPPFFR 374

Query: 373 LKRPWHPST-----SSFNDNRDETASGLN---WLRGGTGEQGLTTLNFQSLGMFPWMQQR 424
            KRP  P       S F++    T   L     ++   G  GL+   + ++   P +   
Sbjct: 375 SKRPRQPGMPDDELSDFDNIFKRTMPWLGDDMCMKDPQGLPGLSLAQWMNMQQNPALANS 434

Query: 425 VEPSFL------------GNDHNQQYQAMLAAGMQSGDPV---RQQFMQLQQPFQYLQQ- 468
           ++P++             G D ++Q     A  +   D V    Q+ +Q  Q   +LQ+ 
Sbjct: 435 LQPNYAPSLSGSILQNIPGADISRQL-GFSAPQISQSDNVALNTQRLLQTAQQLDHLQKL 493

Query: 469 ---SGSQNPLQLKQQQ--HLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQS 523
              S +   + L QQQ   + QQ      ++   Q Q Q  + H    ++T+ +LQ+QQ 
Sbjct: 494 PSTSSTLGTVLLPQQQLGDITQQPRQNLANQTIPQGQVQSQLLHPQNMVQTNNILQQQQP 553

Query: 524 NL 525
           ++
Sbjct: 554 SI 555



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 75/93 (80%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KVYK G+VGRS+DI+R+S Y EL+++L + FGIEG+ ED  R GW+LV+VD E+DV
Sbjct: 998  RTYTKVYKRGAVGRSIDITRYSGYEELKKDLARRFGIEGQLEDRQRIGWKLVYVDHESDV 1057

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1058 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1090


>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
          Length = 1147

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 282/517 (54%), Positives = 354/517 (68%), Gaps = 29/517 (5%)

Query: 14  EGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           EG+ K   +N++LW+ACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K++D+H+P+YPNL
Sbjct: 33  EGERKAPAINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNL 92

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKT 130
           P +LIC LH+VT+HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKT
Sbjct: 93  PSKLICLLHSVTLHADPDTDEVYAQMTLQPVN-TYGKEALQLSELALKHARPQMEFFCKT 151

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+ P LDF +QPPAQEL ARD+HD  W FRHIFRGQPKRH
Sbjct: 152 LTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRH 211

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FV  KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+L
Sbjct: 212 LLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVL 271

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAAHAAA NS FT+F+NPRASP+EFVIP  K+ KA++  ++S+GMRFRM+FETEE  +R
Sbjct: 272 AAAAHAAANNSPFTIFYNPRASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMR 331

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLF 369
           RYMGTITGI+DLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P  F
Sbjct: 332 RYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPF 391

Query: 370 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQRVEP 427
              +KRP      S ++  +     + WL      +   T N     L +  WM      
Sbjct: 392 -FGVKRPRQIDDES-SEMENLFKRAMPWLGEEICIKDAQTHNTTMPGLSLVQWM------ 443

Query: 428 SFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQN-PLQLKQQQHLLQQ 486
                + N+   + L  G+QS     +    L  P   +Q  G+     QL  Q HLLQQ
Sbjct: 444 -----NMNRPQSSTLNTGIQS-----EYLRSLSNP--AMQNLGAAELARQLYVQNHLLQQ 491

Query: 487 LNSQAE-DRAQQQQQPQQHMYHDALQIRTDELLQRQQ 522
            + Q    +  QQ QP   +   +L     +++  QQ
Sbjct: 492 NSVQLNASKLPQQVQPINELAKGSLSCNQLDVIINQQ 528



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 116/227 (51%), Gaps = 33/227 (14%)

Query: 589  PSQVRDFVHSMSLPSSYNG----KDAAVGTENCNTDSQNSVVFGVHID--------SSGL 636
            P+Q    +H    P+++N     KDA    E    D  N+  FG++ D        + GL
Sbjct: 881  PTQTDGLLHQ-GFPTNFNQQQMFKDALPDVEIQEVDPTNNAFFGINSDGPLGFPMETEGL 939

Query: 637  LL----PTTVS-SFTTSVD--------------PGVSSMPLGDSGF-HNSMYGCMQDSSE 676
            L+    P     + +T V+                + S   G S    NS+   + D   
Sbjct: 940  LVSAINPVKCQPNLSTDVEINYRIQKDAQQEISTSMVSQSFGQSDIAFNSIDSAINDGVM 999

Query: 677  LLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 736
            L  N          RTF KVYK G+VGRS+DI RFS Y EL+  + +MFGIEG+ ED  R
Sbjct: 1000 LNRNSCPPAPPQRMRTFTKVYKRGAVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQR 1059

Query: 737  SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
             GW+LV+ D E+DVLLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1060 IGWKLVYTDHEDDVLLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1106


>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
          Length = 1086

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/458 (58%), Positives = 330/458 (72%), Gaps = 22/458 (4%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNL  +LIC L
Sbjct: 21  VNEELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICIL 80

Query: 80  HNVTMHADVETDEVYAQMTLQPLS--PEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDT 136
            +VTM AD +TDEVYA+MTLQP+S      K+T +  EL +   +P T +FCKTLTASDT
Sbjct: 81  RSVTMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDT 140

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGW
Sbjct: 141 STHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGW 200

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           S+FVS KRL+AGDSVLFI + + QLLLGIRRA R P  + SSVLSSDSMHIG+LAAAAHA
Sbjct: 201 SLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHA 260

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
           AA NS FTVF+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES+ RRYMGTI
Sbjct: 261 AANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 320

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 375
           TGISD+DP+RW NS WR+++V WDE+   ER+ RVSLWE+EP+   F +YPS      KR
Sbjct: 321 TGISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPL-FTAKR 379

Query: 376 PWHPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQR----- 424
           P  P  +  +D+  E  +     + W     G++ L+T N     L +  WM  +     
Sbjct: 380 PRQPGVT--DDDSSEMDNLFKRTMPWFGEEVGKRDLSTQNGLVPGLSLVQWMNMQHNPSL 437

Query: 425 ----VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 458
               ++P  L +   +  Q + AA +      + QF+Q
Sbjct: 438 ANTVMQPELLNSLAGKPVQTLAAADLSRQISFQPQFLQ 475



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 119/213 (55%), Gaps = 38/213 (17%)

Query: 602  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHID------SSGLLLPTT---------- 641
            PSS+N     ++A   +E   TD+ N+ +FG +ID      +   LL T           
Sbjct: 847  PSSFNQHQPLREAVPDSEFEVTDAGNNFLFGANIDGHMEPLNEDDLLGTAFEADKYMEQM 906

Query: 642  ----VSSFTTSVDP------GVSSMPLG--DSGFHNSMYGCMQDSSELLHNV---GQIDQ 686
                +S++ +S D        + S P G  D  F NS+   + D   L  N    G + Q
Sbjct: 907  PGNGISNYISSKDSQQELSSSMISHPFGVADIAF-NSIDSSINDIQFLNRNSRAPGPVQQ 965

Query: 687  LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
                RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D 
Sbjct: 966  RM--RTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDH 1023

Query: 747  ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            E DVLL+GDDPWE FV+ V  I+ILSP++ ++M
Sbjct: 1024 EKDVLLVGDDPWEDFVNCVRCIRILSPQEERQM 1056


>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
 gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1150

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/424 (61%), Positives = 321/424 (75%), Gaps = 12/424 (2%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S++G+     EG+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D 
Sbjct: 5   SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQ 122
            IP+YPNLP +LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++Q
Sbjct: 64  FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQ 122

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
           P  +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI
Sbjct: 123 PNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHI 182

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SS
Sbjct: 183 YRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISS 242

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           DSMHIG+LAAAAHA A NS FT+F+NPR A+P+EFV+PL KY KA++  +VS+GMRFRM+
Sbjct: 243 DSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMI 301

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           FETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T
Sbjct: 302 FETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 361

Query: 362 FPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGM 417
            P Y  + P    RP         D+  +  S L     WL      +  ++  F  L +
Sbjct: 362 -PFY--ICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSL 418

Query: 418 FPWM 421
             WM
Sbjct: 419 VQWM 422



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 76/103 (73%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1038 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1097

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQ 793
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q
Sbjct: 1098 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ 1140


>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
 gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1165

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/424 (61%), Positives = 321/424 (75%), Gaps = 12/424 (2%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S++G+     EG+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D 
Sbjct: 5   SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQ 122
            IP+YPNLP +LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++Q
Sbjct: 64  FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQ 122

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
           P  +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI
Sbjct: 123 PNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHI 182

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SS
Sbjct: 183 YRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISS 242

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           DSMHIG+LAAAAHA A NS FT+F+NPR A+P+EFV+PL KY KA++  +VS+GMRFRM+
Sbjct: 243 DSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMI 301

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           FETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T
Sbjct: 302 FETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 361

Query: 362 FPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGM 417
            P Y  + P    RP         D+  +  S L     WL      +  ++  F  L +
Sbjct: 362 -PFY--ICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSL 418

Query: 418 FPWM 421
             WM
Sbjct: 419 VQWM 422



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1038 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1097

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 802
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1098 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1148


>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1168

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/424 (61%), Positives = 321/424 (75%), Gaps = 12/424 (2%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S++G+     EG+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D 
Sbjct: 5   SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQ 122
            IP+YPNLP +LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++Q
Sbjct: 64  FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQ 122

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
           P  +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI
Sbjct: 123 PNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHI 182

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SS
Sbjct: 183 YRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISS 242

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           DSMHIG+LAAAAHA A NS FT+F+NPR A+P+EFV+PL KY KA++  +VS+GMRFRM+
Sbjct: 243 DSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMI 301

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           FETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T
Sbjct: 302 FETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 361

Query: 362 FPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGM 417
            P Y  + P    RP         D+  +  S L     WL      +  ++  F  L +
Sbjct: 362 -PFY--ICPPPFFRPRFSGQPGMLDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSL 418

Query: 418 FPWM 421
             WM
Sbjct: 419 VQWM 422



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 80/112 (71%), Gaps = 1/112 (0%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV + GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD E D+
Sbjct: 1041 RTYTKVQERGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHETDI 1100

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 802
            LL+GDDPWE FV+ V  +KILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1101 LLVGDDPWEEFVNFVQSLKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1151


>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
          Length = 1141

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 284/526 (53%), Positives = 349/526 (66%), Gaps = 46/526 (8%)

Query: 14  EGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           EG+ K   +N ELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+V++ +PNYPNL
Sbjct: 22  EGERKAATINGELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVEAQVPNYPNL 81

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKT 130
           P +LIC LH+V + AD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKT
Sbjct: 82  PSKLICLLHSVILQADPDTDEVYAQMTLQPVN-TYAKEALQLSELALRQARPQMEFFCKT 140

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+FPSLDFSLQPP QEL ARD+HD  W FRHIFRGQPKRH
Sbjct: 141 LTASDTSTHGGFSVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNIWTFRHIFRGQPKRH 200

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FVS K+L AGDSV+F+ +EK+QLLLGIRRA R PT + SSVLSSDSMHIG+L
Sbjct: 201 LLTTGWSLFVSGKKLFAGDSVIFVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVL 260

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAAHAAA +S FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM  ETEE   R
Sbjct: 261 AAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKAMYSNQISLGMRFRMTCETEELGTR 320

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLF 369
           RYMGTITGISDLDPVRW +S WRS++VGWDES AGER+ RVS+WEIEPL   F + P  F
Sbjct: 321 RYMGTITGISDLDPVRWKSSQWRSLQVGWDESAAGERRNRVSIWEIEPLAAPFFICPQPF 380

Query: 370 PLRLKRPWHPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTT--LNFQSLGMFPWMQQ 423
              +KR     +   +D   E  +     + WL      +   T       L +  WM  
Sbjct: 381 -FGVKR-----SRQLDDESSEMENLWKRAMPWLGEEVCIKDAQTQGATIPGLSLVQWM-- 432

Query: 424 RVEPSFLGNDHNQQYQAMLAAGMQS------GDPVRQQFMQLQQPFQYLQQSGSQNPLQL 477
                   N + QQ  ++ +  MQS       +P  Q F              +    QL
Sbjct: 433 --------NMNRQQSSSLASTSMQSEYLRSASNPAMQNF------------GAADLARQL 472

Query: 478 KQQQHLLQQLNSQAE-DRAQQQQQPQQHMYHDALQIRTDELLQRQQ 522
             Q HLLQQ N      +  +Q +P   +  + L +     +++QQ
Sbjct: 473 YMQNHLLQQNNIHLNSSKLHEQAKPVNDLCKETLPLDQLGAIRKQQ 518



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DI ++S Y EL + L +MFGIEG+ ED  R GW+LV+ D E+DV
Sbjct: 1008 RTFTKVYKRGAVGRSIDIGKYSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDDV 1067

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1068 LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1100


>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
          Length = 1165

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/424 (60%), Positives = 320/424 (75%), Gaps = 12/424 (2%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S++G+     EG+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D 
Sbjct: 5   SSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD- 63

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQ 122
            IP+YPNLP +LIC LHNVT++AD ETDEVYAQMTLQP++ +  ++  +  ++G+  ++Q
Sbjct: 64  FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRNALLASDMGLKLNRQ 122

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
           P  +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI
Sbjct: 123 PNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHI 182

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQPKRHLLTTGWSVFVS KR  AGDSVLFI + K QLLLGIRRA R    + SSV+SS
Sbjct: 183 YRGQPKRHLLTTGWSVFVSTKRFFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISS 242

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           DSMHIG+LAAAAHA A NS FT+F+NPR A+P+EFV+PL KY KA++  +VS+GMRFRM+
Sbjct: 243 DSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMI 301

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           FETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T
Sbjct: 302 FETEECGVRRYMGTVTGISDLDPVRWENSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 361

Query: 362 FPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGM 417
            P Y  + P    RP         D+  +  S L     WL      +  ++  F  L +
Sbjct: 362 -PFY--ICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSL 418

Query: 418 FPWM 421
             WM
Sbjct: 419 VQWM 422



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1038 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1097

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 802
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1098 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1148


>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
          Length = 1149

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 282/519 (54%), Positives = 354/519 (68%), Gaps = 31/519 (5%)

Query: 14  EGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           EG+ K   +N++LW+ACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K++D+H+P+YPNL
Sbjct: 33  EGERKAPAINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNL 92

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKT 130
           P +LIC LH+VT+HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKT
Sbjct: 93  PSKLICLLHSVTLHADPDTDEVYAQMTLQPVN-TYGKEALQLSELALKHARPQMEFFCKT 151

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+ P LDF +QPPAQEL ARD+HD  W FRHIFRGQPKRH
Sbjct: 152 LTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRH 211

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FV  KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+L
Sbjct: 212 LLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVL 271

Query: 251 AAAAHAAATNSCFTVFFNPR--ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           AAAAHAAA NS FT+F+NPR  ASP+EFVIP  K+ KA++  ++S+GMRFRM+FETEE  
Sbjct: 272 AAAAHAAANNSPFTIFYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELG 331

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS 367
           +RRYMGTITGI+DLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P 
Sbjct: 332 MRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQ 391

Query: 368 LFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQRV 425
            F   +KRP      S ++  +     + WL      +   T N     L +  WM    
Sbjct: 392 PF-FGVKRPRQIDDES-SEMENLFKRAMPWLGEEICIKDAQTHNTTMPGLSLVQWM---- 445

Query: 426 EPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQN-PLQLKQQQHLL 484
                  + N+   + L  G+QS     +    L  P   +Q  G+     QL  Q HLL
Sbjct: 446 -------NMNRPQSSTLNTGIQS-----EYLRSLSNP--AMQNLGAAELARQLYVQNHLL 491

Query: 485 QQLNSQAE-DRAQQQQQPQQHMYHDALQIRTDELLQRQQ 522
           QQ + Q    +  QQ QP   +   +L     +++  QQ
Sbjct: 492 QQNSVQLNASKLPQQVQPINELAKGSLSCNQLDVIINQQ 530



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 116/227 (51%), Gaps = 33/227 (14%)

Query: 589  PSQVRDFVHSMSLPSSYNG----KDAAVGTENCNTDSQNSVVFGVHID--------SSGL 636
            P+Q    +H    P+++N     KDA    E    D  N+  FG++ D        + GL
Sbjct: 883  PTQTDGLLHQ-GFPTNFNQQQMFKDALPDVEIQEVDPTNNAFFGINSDGPLGFPMETEGL 941

Query: 637  LL----PTTVS-SFTTSVD--------------PGVSSMPLGDSGF-HNSMYGCMQDSSE 676
            L+    P     + +T V+                + S   G S    NS+   + D   
Sbjct: 942  LVSAINPVKCQPNLSTDVEINYRIQKDAQQEISTSMVSQSFGQSDIAFNSIDSAINDGVM 1001

Query: 677  LLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 736
            L  N          RTF KVYK G+VGRS+DI RFS Y EL+  + +MFGIEG+ ED  R
Sbjct: 1002 LNRNSCPPAPPQRMRTFTKVYKRGAVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQR 1061

Query: 737  SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
             GW+LV+ D E+DVLLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1062 IGWKLVYTDHEDDVLLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1108


>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 1104

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/361 (70%), Positives = 298/361 (82%), Gaps = 2/361 (0%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           + +ELWHACAGPLV LP  GT V+YFPQGHSEQV+A+ N++V S IPNYPNLP +L+C L
Sbjct: 7   IKAELWHACAGPLVKLPPSGTHVIYFPQGHSEQVSASLNRDVHSQIPNYPNLPSKLLCLL 66

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS-KQPTNYFCKTLTASDTST 138
           H +T+HAD +TD+VYAQ+TLQPL P   KD  +  +L + S K P ++FCK LTASDTST
Sbjct: 67  HTLTLHADPQTDQVYAQITLQPL-PSFDKDALLRSDLALESTKPPPDFFCKQLTASDTST 125

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSVPRRAAEK+FP LD+S+QPPAQEL+ARDLHD  WKFRHI+RGQPKRHLLTTGWS+
Sbjct: 126 HGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQPKRHLLTTGWSL 185

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS KRL AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA
Sbjct: 186 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 245

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
            NS FTVF+NPRASPSEFVIPL KY K+V+  + S+GMRFRM+FETE+S  RR+MGT+TG
Sbjct: 246 NNSPFTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRHMGTVTG 305

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           ISDLDPV+W NS WR+++VGWDESTAGE++ RVS+WEIEP+T           R KRP  
Sbjct: 306 ISDLDPVQWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQ 365

Query: 379 P 379
           P
Sbjct: 366 P 366



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 75/93 (80%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KVYK G+VGRS+DI+R+S Y EL+++L + FGIEG+ ED  R GW+LV+VD E+DV
Sbjct: 992  RTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESDV 1051

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1052 LLLGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1084


>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
 gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
           AltName: Full=OsMP; AltName: Full=Protein
           MONOPTEROS-like
 gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
           AltName: Full=OsMP; AltName: Full=Protein
           MONOPTEROS-like
 gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
 gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
          Length = 955

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/356 (67%), Positives = 284/356 (79%), Gaps = 5/356 (1%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP 
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPS 89

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD +TDEVYAQMTLQP++ E   D F    LG    SK PT YFCK L
Sbjct: 90  QLLCQVHNITLHADKDTDEVYAQMTLQPVNSE--TDVFPIPTLGAYTKSKHPTEYFCKNL 147

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 148 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 207

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRA R  T++ SSVLS+DSMHIG+LA
Sbjct: 208 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLA 267

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++ S FT+++NPR SPS FVIP+ +Y KA +  + SVGMRF M+FETEESS RR
Sbjct: 268 AAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATY-MQPSVGMRFAMMFETEESSKRR 326

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
           Y GT+ GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 327 YTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPS 382



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 14/178 (7%)

Query: 621 SQNSVVFGVHIDSSGLLLPTTVSS---FTTSVDPGV-SSMP-------LGDSGFHNSMYG 669
           SQ++ + G+H++S+   + TT  S    T   D G+ S +P       L     H +  G
Sbjct: 768 SQSANLSGLHMESTHRSINTTSCSQPMSTGGFDAGMYSKLPRLKESQILSLPEIHTNSMG 827

Query: 670 ---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 726
              C  D++E   +        P RT+ KV K GSVGRS+D++ F +Y+ELR  +  MFG
Sbjct: 828 TSACSMDATEYSLDRSAKPMKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFG 887

Query: 727 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           ++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E G+
Sbjct: 888 LQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGM 945


>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
          Length = 955

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/356 (68%), Positives = 282/356 (79%), Gaps = 5/356 (1%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP 
Sbjct: 31  QGAKKVINSELWHACAGPLVFLPQRGSLVYYFPQGHSEQVAATTRKVPNSRIPNYPNLPS 90

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+TMHAD ETDEVYAQMTLQP++ E   D F    LG    SK P  YFCK L
Sbjct: 91  QLLCQVHNITMHADKETDEVYAQMTLQPVNSE--TDVFPIPALGSYAKSKHPPEYFCKNL 148

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 149 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 208

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRA R  T + SSVLS+DSMHIG+LA
Sbjct: 209 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDSMHIGVLA 268

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++ S FT+++NPR SPS FV+PL +Y KA +  + SVGMRF M+FETEESS RR
Sbjct: 269 AAAHAASSGSSFTIYYNPRTSPSPFVVPLARYNKANY-VQQSVGMRFAMMFETEESSKRR 327

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
           Y GTI G+SD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 328 YTGTIVGVSDYDPIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENALVFPS 383



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/125 (48%), Positives = 81/125 (64%), Gaps = 3/125 (2%)

Query: 663 FHNSMYG---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELRE 719
            HNS  G   C  D ++   +        P RT+ KV K GSVGRS+D++R+  Y ELR 
Sbjct: 820 IHNSSRGTSSCSMDVTDYSIDRSAKPLKPPVRTYTKVQKLGSVGRSIDVTRYRDYRELRS 879

Query: 720 ELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            +  MFG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M
Sbjct: 880 AIASMFGLQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQM 939

Query: 780 GEQGV 784
            E G+
Sbjct: 940 SESGM 944


>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1113

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/369 (67%), Positives = 293/369 (79%), Gaps = 8/369 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G  G+ K +N+ELW ACAGPL++LP+ GT VVYFPQGHSEQVAA+  K+VD+ +PNY NL
Sbjct: 17  GEGGEKKSINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNL 76

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--PIELGIPSKQPTNYFCK 129
           P ++ C LHNVT+HAD +TDEVYAQM L+P+ P    D  +   I L +   QP  +FCK
Sbjct: 77  PSKIPCLLHNVTLHADPDTDEVYAQMALRPV-PSFDTDALLRSDISLKLSKPQP-EFFCK 134

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
            LTASDTSTHGGFSVPRRAAEK+FP LD+SLQ P QEL+ARDLHD  W+FRHI+RG+PKR
Sbjct: 135 QLTASDTSTHGGFSVPRRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKPKR 194

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+F+S KRL+AGDSVLF+ +EK QLLLGIRRA R P+ + SSVLSSDSMHIG+
Sbjct: 195 HLLTTGWSLFISGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGV 254

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAA A A NS FTVF+NPRASPSEFVIPL KY KAV+   +S GM FRM FETE+S  
Sbjct: 255 LAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDSGT 314

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYPS 367
           RRYMGTI G+SDLD VRW NS WR+++VGWDESTA +R+ RVS+WEIEP+TT  F   P 
Sbjct: 315 RRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEPVTTPYFICPPP 374

Query: 368 LFPLRLKRP 376
            F  R KRP
Sbjct: 375 FF--RSKRP 381



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 74/93 (79%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KVYK G+VGRS+DI+R+S Y EL+++L   FGIEG+ ED  R GW+LV+VD ENDV
Sbjct: 1001 RTYTKVYKRGAVGRSIDITRYSGYEELKQDLALKFGIEGQLEDRERIGWKLVYVDHENDV 1060

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1061 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1093


>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
 gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
          Length = 1096

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 242/358 (67%), Positives = 295/358 (82%), Gaps = 2/358 (0%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           + + +  +G + ++  +NSELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+ D 
Sbjct: 12  AIAAVASEGEDKNDGGVNSELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDGDV 71

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP 123
            +PNY NLP +L C LH++T+HAD +TDEVYA+MTLQP+S  +  D  +  ++ + S +P
Sbjct: 72  QVPNYSNLPSKLPCTLHSLTLHADSDTDEVYARMTLQPVSSFDM-DAILRSDISLKSNKP 130

Query: 124 T-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
              +FCK LTASDTSTHGGFSVPRRAAEK+FP LDFS QPPAQEL+A+DLH   WKFRHI
Sbjct: 131 QPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHI 190

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQPKRHLLTTGWS+F+S KRL+AGDSVLFI +EK QLLLGIRRA R PT + SSVLSS
Sbjct: 191 YRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSS 250

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
           DSMHIG+LAAAAHA+A NS FTVF+NPRASPSEFVIPL KY +AV+  ++S GMRFRM+F
Sbjct: 251 DSMHIGILAAAAHASANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMF 310

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           ETE+S  RRYMGT+ G+SDLD VRW NS WR+++VGWDE+TAGER+ RVS+WEIEP+T
Sbjct: 311 ETEDSGTRRYMGTVIGVSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVT 368



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/98 (60%), Positives = 76/98 (77%)

Query: 686  QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 745
            Q    RT+ KVYK G+VGRS+DI+R+S Y+EL+ +L + FGIEG+ ED  R GW+LV+VD
Sbjct: 979  QFQRIRTYTKVYKRGAVGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVD 1038

Query: 746  RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
             ENDVLL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1039 HENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1076


>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
           from Arabidopsis thaliana gb|AF186466 [Arabidopsis
           thaliana]
          Length = 1062

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/425 (59%), Positives = 309/425 (72%), Gaps = 33/425 (7%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G     +EG+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+
Sbjct: 1   MKAPSNGFLPSSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
            D  IPNYPNLP +LIC LH+VT+HAD ETDEVYAQMTLQP++                +
Sbjct: 61  TD-FIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKL--------------N 105

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +QPT +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W FR
Sbjct: 106 RQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFR 165

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RG          WSVFVS KRL AGDSVLF+ +EK+QL+LGIRRA R    + SSV+
Sbjct: 166 HIYRG----------WSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVI 215

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SSDSMHIG+LAAAAHA A +S FT+FFNPRASPSEFV+PL KY KA++  +VS+GMRFRM
Sbjct: 216 SSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRM 274

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           +FETE+  VRRYMGT+TGISDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP+ 
Sbjct: 275 MFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI 334

Query: 361 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLG 416
           T P Y  + P    RP +P      D+  +  +       W+    G +   +  F  L 
Sbjct: 335 T-PFY--ICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEDFGMKDAQSSMFPGLS 391

Query: 417 MFPWM 421
           +  WM
Sbjct: 392 LVQWM 396



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 96/144 (66%), Gaps = 6/144 (4%)

Query: 652  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 709
            G+ S+P    G  N + G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 897  GIPSIPF-KPGCSNEV-GGINDSG--IMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVT 952

Query: 710  RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 769
            R+S Y+ELR +L +MFGIEG+ EDPL S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 953  RYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 1012

Query: 770  ILSPEDVQKMGEQGVESFSPSSGQ 793
            ILS  +VQ+M   G  +  P++ Q
Sbjct: 1013 ILSSVEVQQMSLDGDLAAIPTTNQ 1036


>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
 gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
           Full=Auxin-responsive protein IAA24; AltName:
           Full=Transcription factor MONOPTEROS
 gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
 gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
 gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
 gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
 gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
          Length = 902

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/363 (64%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 51  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 137
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGSKHPTEFFCKTLTASDTS 168

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAEK+FP LD+S QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 169 THGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 228

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 229 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 288

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 289 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 348

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 349 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 407

Query: 378 HPS 380
           HPS
Sbjct: 408 HPS 410



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 71/96 (73%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
            RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+D
Sbjct: 792 VRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           VLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 887


>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
          Length = 902

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/363 (64%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 51  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 137
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGSKHPTEFFCKTLTASDTS 168

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAEK+FP LD+S QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 169 THGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 228

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 229 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 288

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 289 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 348

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 349 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 407

Query: 378 HPS 380
           HPS
Sbjct: 408 HPS 410



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 72/96 (75%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
            RT++KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+D
Sbjct: 792 VRTYIKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           VLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 887


>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
          Length = 890

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/363 (64%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 39  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 98

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 137
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 99  HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGSKHPTEFFCKTLTASDTS 156

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAEK+FP LD+S QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 157 THGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 216

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 217 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 276

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 277 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 336

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 337 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 395

Query: 378 HPS 380
           HPS
Sbjct: 396 HPS 398



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 71/96 (73%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
            RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+D
Sbjct: 780 VRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 839

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           VLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 840 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 875


>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
          Length = 850

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/363 (64%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 40  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 99

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 137
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 100 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGSKHPTEFFCKTLTASDTS 157

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAEK+FP LD+S QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 158 THGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 217

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 218 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 277

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 278 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 337

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 338 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 396

Query: 378 HPS 380
           HPS
Sbjct: 397 HPS 399



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 52/70 (74%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
            RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+D
Sbjct: 781 VRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 840

Query: 750 VLLLGDDPWE 759
           VLL+GDDPWE
Sbjct: 841 VLLVGDDPWE 850


>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
          Length = 867

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/363 (63%), Positives = 288/363 (79%), Gaps = 5/363 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NSELWHACAGPLV+LP VG+ V YFPQGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 49  INSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 108

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 137
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   E G+   SK P+ +FCKTLTASDTS
Sbjct: 109 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPEFGLLRGSKHPSEFFCKTLTASDTS 166

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 167 THGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 226

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 227 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 286

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           A  + F +F+NPRA P+EFVIP+ KY KA+  +++SV MRF M+FETE+S  RRYMGTI 
Sbjct: 287 ANRTPFLIFYNPRACPAEFVIPIAKYRKAICGSQLSVSMRFGMMFETEDSGKRRYMGTIV 346

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
           GISDLDP+RW+ S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 347 GISDLDPLRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 405

Query: 378 HPS 380
           HPS
Sbjct: 406 HPS 408


>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 903

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 232/364 (63%), Positives = 286/364 (78%), Gaps = 6/364 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 51  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI---PSKQPTNYFCKTLTASDT 136
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+    SK PT +FCKTLTASDT
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGGSKHPTEFFCKTLTASDT 168

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGW
Sbjct: 169 STHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGW 228

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           S+FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA
Sbjct: 229 SLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHA 288

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
            A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI
Sbjct: 289 TANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTI 348

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR 
Sbjct: 349 VGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQ 407

Query: 377 WHPS 380
            HPS
Sbjct: 408 LHPS 411



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 71/96 (73%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
            RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+D
Sbjct: 793 VRTYTKVQKTGSVGRSIDVTSFKDYKELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESD 852

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           VLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 853 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 888


>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
          Length = 901

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 232/363 (63%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 48  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 107

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 137
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 108 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGLLRGSKHPTEFFCKTLTASDTS 165

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 166 THGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 225

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 226 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 285

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 286 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 345

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 346 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 404

Query: 378 HPS 380
           HPS
Sbjct: 405 HPS 407



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/115 (52%), Positives = 82/115 (71%), Gaps = 2/115 (1%)

Query: 673 DSSELLHNVGQIDQL-TP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGK 730
           D+S L ++ G   +L TP  RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG 
Sbjct: 772 DTSLLQNSKGSWQKLATPRVRTYTKVQKTGSVGRSIDVTSFRDYEELKSAIECMFGLEGL 831

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
              P  SGW+LV+VD E+DVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 832 LTQPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 886


>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
          Length = 945

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/346 (68%), Positives = 274/346 (79%), Gaps = 5/346 (1%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LPP
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPP 89

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD ETDE+Y QMTLQPL  E   D F    LG    SK PT YFCK L
Sbjct: 90  QLLCQVHNITLHADKETDEIYCQMTLQPLHSE--TDVFPIPTLGAYTKSKHPTEYFCKNL 147

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 148 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 207

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LA
Sbjct: 208 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLA 267

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++   FT+++NPR SPS FVIPL +Y KA +  + SVGMRF M+FETEESS RR
Sbjct: 268 AAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATY-LQPSVGMRFAMMFETEESSKRR 326

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
             G I GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE
Sbjct: 327 CTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)

Query: 628 GVHIDSSGLLLPTTVSSFTTSVDPGVSSM----PLGDSGFHNSMYG---CMQDSSELLHN 680
            +HI+SS    P    SF     P +S++    PL     H S  G   C  D++     
Sbjct: 771 AIHINSSSCSQPLATGSFDAGAFPKLSNIRECQPLPLQEIHTSSMGTPSCSMDAAAEYGT 830

Query: 681 VGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 739
                Q+ P  RT+ KV K GSVGR +D++RF  Y+ELR  +  MFG++GK E P  S W
Sbjct: 831 DRSAKQMKPPVRTYTKVQKLGSVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDW 890

Query: 740 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           +LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E GV
Sbjct: 891 KLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGV 935


>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
 gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
          Length = 946

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/369 (66%), Positives = 284/369 (76%), Gaps = 8/369 (2%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP 
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPS 89

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK PT YFCK L
Sbjct: 90  QLLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPSLGAYTKSKHPTEYFCKNL 147

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 148 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 207

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LA
Sbjct: 208 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLA 267

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++   FT+++NPR SPS FVIPL +Y KA +  + SVGMRF M+FETEES  RR
Sbjct: 268 AAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATY-LQPSVGMRFAMMFETEESIKRR 326

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
             GTI GISD DP+RW NS WR+++V WDE   GER  RVSLW+IE      ++PS  PL
Sbjct: 327 CTGTIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFPS--PL 383

Query: 372 RLKRPWHPS 380
             KR   PS
Sbjct: 384 NSKRQCLPS 392



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 105/179 (58%), Gaps = 16/179 (8%)

Query: 620 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVSSM------PLGDSGFHNSMYG 669
           +SQ++ + G+H+++    S    P    SF       +S+M      PL +   HN   G
Sbjct: 760 ESQSASLSGLHMEAIHINSSCSQPLATGSFDAGTFSKLSNMKECQALPLQE--IHNGSMG 817

Query: 670 ---CMQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMF 725
              C  D++        +  + P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  MF
Sbjct: 818 TPSCSMDAAAEYSMDRSVKPMKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACMF 877

Query: 726 GIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           G++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E GV
Sbjct: 878 GLQGKLEHPGGSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGV 936


>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
          Length = 935

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/465 (56%), Positives = 315/465 (67%), Gaps = 32/465 (6%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP 
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPS 89

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK P+ YFCK L
Sbjct: 90  QLLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPTLGAYTKSKHPSEYFCKNL 147

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 148 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 207

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LA
Sbjct: 208 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLA 267

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++   FTV++NPR SPS FVIPL +Y  A +  + SVGMRF M+FETEESS RR
Sbjct: 268 AAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATY-LQPSVGMRFAMMFETEESSKRR 326

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
             GTI GISD +P+RW NS WR+++V WDE   GER  RVSLW+IE      ++ S  PL
Sbjct: 327 CTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFSS--PL 383

Query: 372 RLKRPWHPS-------TSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQ 422
             KR   PS        SS +  +      L  + G + +  L  LN   Q+LG     Q
Sbjct: 384 NSKRQCLPSYGVSGLHVSSISKPQGSPFGNLQHMPGISSDIALLLLNQSAQNLGSSIACQ 443

Query: 423 QRVEPSFLGNDH---------------NQQYQAMLAAGMQSGDPV 452
           Q    S + N                 N+  Q + A G+Q GD V
Sbjct: 444 QSSFSSIIQNAKQSYFPPTTLGASTGWNESQQQLNALGIQKGDQV 488



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 17/180 (9%)

Query: 620 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVS------SMPLGDSGFHNSMYG 669
           +SQ++ + G+H+++    S  L P    SF       +S      ++PL +   HNS  G
Sbjct: 748 ESQSASLSGLHMEAVHINSSCLQPLATGSFDAGTFSKLSNIKECQALPLQE--IHNSSMG 805

Query: 670 ---CMQDSSELLHNVGQ-IDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 724
              C  D++ + + + + +  L P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  M
Sbjct: 806 TPSCSMDAAAVEYCMDRSVKPLKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACM 865

Query: 725 FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           FG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+IL+P +VQ+M E GV
Sbjct: 866 FGLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGV 925


>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
          Length = 936

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/465 (56%), Positives = 315/465 (67%), Gaps = 32/465 (6%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP 
Sbjct: 31  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPS 90

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK P+ YFCK L
Sbjct: 91  QLLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPTLGAYTKSKHPSEYFCKNL 148

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 149 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 208

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LA
Sbjct: 209 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLA 268

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++   FTV++NPR SPS FVIPL +Y  A +  + SVGMRF M+FETEESS RR
Sbjct: 269 AAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATY-LQPSVGMRFAMMFETEESSKRR 327

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
             GTI GISD +P+RW NS WR+++V WDE   GER  RVSLW+IE      ++ S  PL
Sbjct: 328 CTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFSS--PL 384

Query: 372 RLKRPWHPS-------TSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQ 422
             KR   PS        SS +  +      L  + G + +  L  LN   Q+LG     Q
Sbjct: 385 NSKRQCLPSYGVSGLHVSSISKPQGSPFGNLQHMPGISSDIALLLLNQSAQNLGSSIACQ 444

Query: 423 QRVEPSFLGNDH---------------NQQYQAMLAAGMQSGDPV 452
           Q    S + N                 N+  Q + A G+Q GD V
Sbjct: 445 QSSFSSIIQNAKQSYFPPTTLGASTGWNESQQQLNALGIQKGDQV 489



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 17/180 (9%)

Query: 620 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVS------SMPLGDSGFHNSMYG 669
           +SQ++ + G+H+++    S  L P    SF       +S      ++PL +   HNS  G
Sbjct: 749 ESQSASLSGLHMEAVHINSSCLQPLATGSFDAGTFSKLSNIKECQALPLQE--IHNSSMG 806

Query: 670 ---CMQDSSELLHNVGQ-IDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 724
              C  D++ + + + + +  L P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  M
Sbjct: 807 TPSCSMDAAAVEYCMDRSVKPLKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACM 866

Query: 725 FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           FG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+IL+P +VQ+M E GV
Sbjct: 867 FGLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGV 926


>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
          Length = 836

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/363 (63%), Positives = 285/363 (78%), Gaps = 5/363 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NS LWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 39  INSMLWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 98

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 137
           HNVT+HAD ++DE+YAQM+LQP+  E  +D     +LG+   SK P+ YFCKTLTASDTS
Sbjct: 99  HNVTLHADKDSDEIYAQMSLQPVHSE--RDVLPVPDLGLLRGSKHPSEYFCKTLTASDTS 156

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 157 THGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 216

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 217 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 276

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           A  + F +FFNPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 277 ANRTPFLIFFNPRACPAEFVIPLPKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 336

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 337 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 395

Query: 378 HPS 380
           HPS
Sbjct: 396 HPS 398



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 71/96 (73%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
            RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+D
Sbjct: 729 VRTYTKVQKTGSVGRSIDVTSFRDYEELKTAIECMFGLEGLLTRPKTSGWKLVYVDYESD 788

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           VLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 789 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 824


>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
 gi|224028907|gb|ACN33529.1| unknown [Zea mays]
 gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
          Length = 936

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/465 (56%), Positives = 314/465 (67%), Gaps = 32/465 (6%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP 
Sbjct: 31  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPS 90

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK  + YFCK L
Sbjct: 91  QLLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPTLGAYTKSKHSSEYFCKNL 148

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 149 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 208

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LA
Sbjct: 209 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLA 268

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++   FTV++NPR SPS FVIPL +Y  A +  + SVGMRF M+FETEESS RR
Sbjct: 269 AAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNTATY-LQPSVGMRFAMMFETEESSKRR 327

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
             GTI GISD +P+RW NS WR+++V WDE   GER  RVSLW+IE      ++ S  PL
Sbjct: 328 CTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFSS--PL 384

Query: 372 RLKRPWHPS-------TSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQ 422
             KR   PS        SS +  +      L  + G + +  L  LN   Q+LG     Q
Sbjct: 385 NSKRQCLPSYGVSGLHVSSISKPQGSPFGNLQHMPGISSDIALLLLNQSAQNLGSSIACQ 444

Query: 423 QRVEPSFLGNDH---------------NQQYQAMLAAGMQSGDPV 452
           Q    S + N                 N+  Q + A G+Q GD V
Sbjct: 445 QSSFSSIIQNAKQSYFPPTTLGASTGWNESQQQLNALGIQKGDQV 489



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 17/180 (9%)

Query: 620 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVS------SMPLGDSGFHNSMYG 669
           +SQ++ + G+H+++    S  L P    SF       +S      ++PL +   HNS  G
Sbjct: 749 ESQSASLSGLHMEAVHINSSCLQPLATGSFDAGTFSKLSNIKECQALPLQE--IHNSSMG 806

Query: 670 ---CMQDSSELLHNVGQ-IDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 724
              C  D++ + + + + +  L P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  M
Sbjct: 807 TPSCSMDAAAVEYCMDRSVKPLKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACM 866

Query: 725 FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           FG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+IL+P +VQ+M E GV
Sbjct: 867 FGLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGV 926


>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101205542 [Cucumis sativus]
          Length = 1107

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/366 (68%), Positives = 288/366 (78%), Gaps = 4/366 (1%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + K +N ELW ACAGPLV+LP  G  VVYFPQGHSEQVAA+  K+VD  +  Y       
Sbjct: 23  EKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVTIYLYHYYFA 82

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTAS 134
             +L ++ + AD ETDEVYAQMTL P+ P   KD  +  +L + S +P   +FCKTLTAS
Sbjct: 83  FLKLCSLYLXADPETDEVYAQMTLLPV-PSFDKDALLRSDLALKSNKPQPEFFCKTLTAS 141

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTT 201

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWS+FVS KRL+AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 261

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HAAA NS FTVF+NPRASPSEFVIPL KY KAV   ++S+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMG 321

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 373
           TITGISDLDPVRW  S WR+++VGWDEST GER+ RVS+WEIEP+   F + P  F LR 
Sbjct: 322 TITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPF-LRS 380

Query: 374 KRPWHP 379
           KRP  P
Sbjct: 381 KRPRQP 386



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 76/93 (81%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  + GW+LV+VD ENDV
Sbjct: 995  RTYTKVYKRGAVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDV 1054

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPW+ FV+ V  IKILSP++VQ+M   G
Sbjct: 1055 LLVGDDPWDDFVNCVRSIKILSPQEVQQMSLDG 1087


>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
          Length = 958

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/359 (66%), Positives = 274/359 (76%), Gaps = 18/359 (5%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LPP
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPP 89

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD ETDE+Y QMTLQPL  E   D F    LG    SK PT YFCK L
Sbjct: 90  QLLCQVHNITLHADKETDEIYCQMTLQPLHSE--TDVFPIPTLGAYTKSKHPTEYFCKNL 147

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSL-------------DFSLQPPAQELIARDLHDVEWK 178
           TASDTSTHGGFSVPRRAAEK+FP L             D+S+QPP QELI RDLHD  W 
Sbjct: 148 TASDTSTHGGFSVPRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQELIVRDLHDNMWT 207

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           FRHI+RGQPKRHLLTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SS
Sbjct: 208 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSS 267

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           VLS+DSMHIG+LAAAAHAA++   FT+++NPR SPS FVIPL +Y KA +  + SVGMRF
Sbjct: 268 VLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATY-LQPSVGMRF 326

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            M+FETEESS RR  G I GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE
Sbjct: 327 AMMFETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 385



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)

Query: 628 GVHIDSSGLLLPTTVSSFTTSVDPGVSSM----PLGDSGFHNSMYG---CMQDSSELLHN 680
            +HI+SS    P    SF     P +S++    PL     H S  G   C  D++     
Sbjct: 784 AIHINSSSCSQPLATGSFDAGAFPKLSNIRECQPLPLQEIHTSSMGTPSCSMDAAAEYGT 843

Query: 681 VGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 739
                Q+ P  RT+ KV K GSVGR +D++RF  Y+ELR  +  MFG++GK E P  S W
Sbjct: 844 DRSAKQMKPPVRTYTKVQKLGSVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDW 903

Query: 740 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           +LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E GV
Sbjct: 904 KLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGV 948


>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
 gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
          Length = 363

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/367 (65%), Positives = 284/367 (77%), Gaps = 18/367 (4%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q   G  K +NSELW+ACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPN
Sbjct: 8   QDQSGIRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTRRSATSQIPNYPN 67

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCK 129
           LP QL+CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCK
Sbjct: 68  LPSQLLCQVHNVTLHADKDTDEIYAQMSLQPVNTE--KDVFPIPDFGLRPSKHPSEFFCK 125

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAEK+FP LD+++QPP QEL+ RDLHD  W FRHI+RGQPKR
Sbjct: 126 TLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKR 185

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+
Sbjct: 186 HLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLMVGVRRANRQQTTLPSSVLSADSMHIGV 245

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHA A  S FT+F+NPRA PS+FVIPL K+ KAVF T+VSVGMRF M+FETEES  
Sbjct: 246 LAAAAHATANRSPFTIFYNPRACPSDFVIPLIKFRKAVFGTQVSVGMRFGMMFETEESGK 305

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTI GISDL              V WDE    ++Q RVS WEIE   +  ++PSL 
Sbjct: 306 RRYMGTIVGISDL--------------VEWDEPGCSDKQNRVSSWEIETPESLFIFPSLT 351

Query: 370 PLRLKRP 376
              LKRP
Sbjct: 352 S-GLKRP 357


>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 955

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/348 (66%), Positives = 276/348 (79%), Gaps = 7/348 (2%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP 
Sbjct: 35  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKTPNSRIPNYPSLPS 94

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+TMHAD +TDEVYAQMTLQP++ E   D F    LG    SK P  YFCK L
Sbjct: 95  QLLCQVHNITMHADKDTDEVYAQMTLQPVNSE--TDVFPIQSLGSYAKSKHPAEYFCKNL 152

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 153 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 212

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA    T + SSVLS+DSMHIG+LA
Sbjct: 213 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDSMHIGVLA 272

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++ S FT+++NPR SPS FV+P+T+Y KA++  + SVGMR  M+ ETEES  RR
Sbjct: 273 AAAHAASSGSSFTIYYNPRTSPSPFVVPMTRYNKAIY-IQQSVGMRIAMMSETEESGKRR 331

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDEST--AGERQPRVSLWEIE 357
           + GTI G+SD DP+RW NS WR+++V WDE     GER  RVS+W+IE
Sbjct: 332 HTGTIVGVSDSDPMRWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIE 379



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 83/126 (65%), Gaps = 3/126 (2%)

Query: 663 FHNSMYG---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELRE 719
            HNS  G   C  D++E   +        P RT+ KV K GSVGRS+D++R+  Y ELR 
Sbjct: 820 IHNSSRGTSSCSMDAAEYSIDRSAKPLKPPVRTYTKVQKLGSVGRSIDVTRYRDYRELRS 879

Query: 720 ELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            +  MFG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M
Sbjct: 880 AIASMFGLQGKLEHPASSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQM 939

Query: 780 GEQGVE 785
            E G++
Sbjct: 940 SENGMQ 945


>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
          Length = 935

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/465 (56%), Positives = 314/465 (67%), Gaps = 33/465 (7%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP 
Sbjct: 31  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPS 90

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK P+ YFCK L
Sbjct: 91  QLLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPTLGAYTKSKHPSEYFCKNL 148

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+R QPKRHL
Sbjct: 149 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR-QPKRHL 207

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LA
Sbjct: 208 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLA 267

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++   FTV++NPR SPS FVIPL +Y  A +  + SVGMRF M+FETEESS RR
Sbjct: 268 AAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATY-LQPSVGMRFAMMFETEESSKRR 326

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
             GTI GISD +P+RW NS WR+++V WDE   GER  RVSLW+IE      ++ S  PL
Sbjct: 327 CTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFSS--PL 383

Query: 372 RLKRPWHPS-------TSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQ 422
             KR   PS        SS +  +      L  + G + +  L  LN   Q+LG     Q
Sbjct: 384 NSKRQCLPSYGVSGLHVSSISKPQGSPFGNLQHMPGISSDIALLLLNQSAQNLGSSIACQ 443

Query: 423 QRVEPSFLGNDH---------------NQQYQAMLAAGMQSGDPV 452
           Q    S + N                 N+  Q + A G+Q GD V
Sbjct: 444 QSSFSSIIQNAKQSYFPPTTLGASTGWNESQQQLNALGIQKGDQV 488



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 17/180 (9%)

Query: 620 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVS------SMPLGDSGFHNSMYG 669
           +SQ++ + G+H+++    S  L P    SF       +S      ++PL +   HNS  G
Sbjct: 748 ESQSASLSGLHMEAVHINSSCLQPLATGSFDAGTFSKLSNIKECQALPLQE--IHNSSMG 805

Query: 670 ---CMQDSSELLHNVGQ-IDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 724
              C  D++ + + + + +  L P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  M
Sbjct: 806 TPSCSMDAAAVEYCMDRSVKPLKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACM 865

Query: 725 FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           FG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+IL+P +VQ+M E GV
Sbjct: 866 FGLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGV 925


>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
          Length = 1092

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/366 (68%), Positives = 293/366 (80%), Gaps = 10/366 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           MK  ++G      EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ NKE
Sbjct: 1   MKAPSNGFLANSGEGERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP- 119
            D  IPNYPNLP +LIC LHNVT+HAD ETDEVYAQMTLQP++  E K+  +  ++G+  
Sbjct: 61  TD-FIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYE-KEALLASDIGLKQ 118

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S+QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FP L+ ++      LI+  +H      
Sbjct: 119 SRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLNMNMN--VVILISLQIHK---NV 173

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
             IF GQPKRHLLTTGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV
Sbjct: 174 HCIFSGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSV 233

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LA+AAHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFR
Sbjct: 234 ISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFR 292

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEES VRRYMGTITGISD+D VRW NS WR+++VGWDES AGER  RVS+WE+EP+
Sbjct: 293 MMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPV 352

Query: 360 TTFPMY 365
            T P Y
Sbjct: 353 VT-PFY 357



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 72/93 (77%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+
Sbjct: 965  RTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDI 1024

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LL+GDDPW+ FVS V  IKILS  +VQ+M   G
Sbjct: 1025 LLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 1057


>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
          Length = 1136

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 279/497 (56%), Positives = 338/497 (68%), Gaps = 39/497 (7%)

Query: 14  EGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV------AATTNKEVDSHI 65
           EG+ K   +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQV      AA+  K+VD+H+
Sbjct: 33  EGERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHV 92

Query: 66  PNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-T 124
           P+YPNLP +LIC LH V +HAD +TDEVYAQMTLQP++    K+     EL +   +P  
Sbjct: 93  PSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVN-TYGKEALQISELALKQARPQM 151

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
            +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARD+HD  W FRHI+R
Sbjct: 152 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYR 211

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQPKRHLLTTGWS+FVS KRL AGDSV+ + +EK+QLLLGIRRA R PT + SSVLSSDS
Sbjct: 212 GQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDS 271

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           MHIG+LAAAAHAAA +S FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM+FET
Sbjct: 272 MHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFET 331

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FP 363
           EE   RRYMGTITGISDLDP            VGWDES AGER+ RVS+WEIEP+   F 
Sbjct: 332 EELGTRRYMGTITGISDLDP------------VGWDESAAGERRNRVSIWEIEPVAAPFF 379

Query: 364 MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQS--LGMFPWM 421
           + P  F   +KRP      S  +N  + A  + WL      +     N  +  L +  WM
Sbjct: 380 LCPQPF-FGVKRPRQLDDESEMENLFKRA--MPWLGEEVCIKDTQNQNSTAPGLSLVQWM 436

Query: 422 Q-QRVEPSFLGNDHNQQ--YQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQ-NP 474
              R + S L N   Q    QA+    MQ   + +  RQ ++Q       LQQ+  Q N 
Sbjct: 437 NMNRQQSSSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQ----NNLLQQNCIQFNS 492

Query: 475 LQLKQQQHLLQQLNSQA 491
            +L QQ   +  L+  A
Sbjct: 493 PKLPQQMQTMNDLSKAA 509



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 1003 RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 1062

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1063 LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1095


>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
 gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
          Length = 954

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/357 (66%), Positives = 279/357 (78%), Gaps = 8/357 (2%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP 
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPS 89

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD +TDEVYAQMTLQP++ E   D F    LG    SK PT YFCK L
Sbjct: 90  QLLCQVHNITLHADKDTDEVYAQMTLQPVNSE--TDVFPIPTLGAYTKSKHPTEYFCKNL 147

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 148 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 207

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRA R  T++ SSVLS+DSMHIG+LA
Sbjct: 208 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLA 267

Query: 252 AAAHAAATNSCFTVFFN-PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAHAA++   F   +N  R SPS FVIP+ +Y KA +  + SVGMRF M+FETEESS R
Sbjct: 268 AAAHAASSA--FGHSWNLHRTSPSPFVIPVARYNKATY-MQPSVGMRFAMMFETEESSKR 324

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
           RY GT+ GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 325 RYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPS 381



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 14/178 (7%)

Query: 621 SQNSVVFGVHIDSSGLLLPTTVSS---FTTSVDPGV-SSMP-------LGDSGFHNSMYG 669
           SQ++ + G+H++S+   + TT  S    T   D G+ S +P       L     H +  G
Sbjct: 767 SQSANLSGLHMESTHRSINTTSCSQPMSTGGFDAGMYSKLPRLKESQILSLPEIHTNSMG 826

Query: 670 ---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 726
              C  D++E   +        P RT+ KV K GSVGRS+D++ F +Y+ELR  +  MFG
Sbjct: 827 TSACSMDATEYSLDRSAKPMKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFG 886

Query: 727 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           ++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E G+
Sbjct: 887 LQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGM 944


>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
          Length = 1096

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/367 (65%), Positives = 279/367 (76%), Gaps = 31/367 (8%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           EG+ K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+VD+ IPNYPNLP 
Sbjct: 20  EGEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPS 79

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLT 132
           +L+C LHNVT+HAD ETDEVYAQMTLQP+ P   K++ +  +L + + +P T++FCKTLT
Sbjct: 80  RLLCILHNVTLHADPETDEVYAQMTLQPV-PAYDKESLLRSDLALKTNKPQTDFFCKTLT 138

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RG+      
Sbjct: 139 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGR------ 192

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
                                  +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAA
Sbjct: 193 -----------------------DEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 229

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AAHAAA NS FTVF+NPRASPSEFVIPL KY KA +  ++S+GMRFRM+FETEES  RRY
Sbjct: 230 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRY 289

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           MGTITGISDLDPVRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T           R
Sbjct: 290 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFR 349

Query: 373 LKRPWHP 379
            KRP  P
Sbjct: 350 SKRPRQP 356



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/91 (62%), Positives = 74/91 (81%)

Query: 693  FVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            F KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  R GW+LV+VD ENDVLL
Sbjct: 986  FAKVYKRGAVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLL 1045

Query: 753  LGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            +GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1046 VGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1076


>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
          Length = 882

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 305/841 (36%), Positives = 440/841 (52%), Gaps = 84/841 (9%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L SELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C+
Sbjct: 66  ALFSELWSACAGPLVTVPKVGDKVFYFPQGHIEQVEASTNQVAEQRMQLY-NLPWKILCE 124

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT----NYFCKTLTAS 134
           + NV + A+ +TDEVYAQ+TL P S +++++         PS  P     + FCKTLTAS
Sbjct: 125 VMNVELKAESDTDEVYAQLTLLPESKQQEENASTEEVSAAPSAAPVRPRVHSFCKTLTAS 184

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV RR A++  P LD S QPP QEL A+DLH  EW+FRHIFRGQP+RHLL +
Sbjct: 185 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQPRRHLLQS 244

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA A 
Sbjct: 245 GWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAW 304

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+ G
Sbjct: 305 HAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KRNYSIGMRFKMRFEGEEAPEQRFTG 363

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TI G+ D DP  W+ S WRS+KV WDE+++  R  RVS W+IEP  + P    L   R K
Sbjct: 364 TIVGMGDSDPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVPRTK 423

Query: 375 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 434
           RP     +S  D+  +       +   T +  L    FQ+       Q+   P     D 
Sbjct: 424 RPRPNVIASTTDSSTQAKEVAPKVAAETQQHALQRA-FQT-------QENATPKTGFGDG 475

Query: 435 NQ----QYQAMLAAGMQ---SGDPVRQQ-----FMQLQQPFQYLQQ-SGSQNPLQLKQQQ 481
           ++    Q   +  +G +   +  P + +     +MQ+ +P  Y +  SG Q P  ++ QQ
Sbjct: 476 SELDTTQKSVLQPSGFEREKNNIPTQIKLGSNGWMQMSRPESYSEMLSGFQPPKDVQNQQ 535

Query: 482 HLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTE 541
                         +Q      + +H       D+  Q   S  P  S+S    M  +T 
Sbjct: 536 GF--------RSFPEQIAAGHSNFWHTVNAHYQDQ--QGSHSTFPG-SWS---LMPQNTG 581

Query: 542 ISVSIS--PMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLG--SKYEPSQVRDFVH 597
             ++    PM   +  LP+ + N    +G   ++  + F Q S G      PS   D   
Sbjct: 582 FGLNKQNYPMMQEVAGLPQRAANTKFGNGGYAALPGRGFDQYSTGWFGHMMPSSHMDDTQ 641

Query: 598 SMSLPSSYNGKDAAVGTENC-NTDSQNSVVFGVHIDS----------------------- 633
               P     +   VG  +   T   +  +FG+H+DS                       
Sbjct: 642 ----PRVIKPQPLVVGHGDMQKTKGASCKLFGIHLDSPAKSEPLKSPPSVAYDGMPHTPG 697

Query: 634 SGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM----YGCMQDSSELLHNVGQIDQLTP 689
           S  L     +      DP  +  PL D+ + +S+      C Q S     N     +   
Sbjct: 698 SAELCRMDATEPEKCYDPSKTPKPL-DAPYADSVPEKHLSCQQAS----RNASGKSRGGS 752

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G  +   +  W +V+ D E 
Sbjct: 753 ARSCKKVHKQGIALGRSVDLTKFNGYMELVSELDDMFDFNGDLKSSNKE-WMVVYTDHEG 811

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDPVGS 808
           D++L+GDDPW  F + V  I I + E+VQ+M    + S S  S   +  RG+  R+  G 
Sbjct: 812 DMMLVGDDPWSEFCNIVHKIFIYTREEVQRMAPGALNSRSEESPANSMERGSAAREVRGC 871

Query: 809 L 809
           L
Sbjct: 872 L 872


>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
          Length = 470

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/363 (61%), Positives = 276/363 (76%), Gaps = 14/363 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 45  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 104

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 137
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK P  +FCKTLTASDTS
Sbjct: 105 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGLLNRSKHPAEFFCKTLTASDTS 162

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 163 THGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 222

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 223 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 282

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           A  + F +F+NPRA P+EFVIPL KY KA+   ++S GMRF M+FETE+S  R       
Sbjct: 283 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKR------- 335

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
             SD+DP+RWS S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 336 --SDMDPLRWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 392

Query: 378 HPS 380
           HPS
Sbjct: 393 HPS 395



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 43/57 (75%)

Query: 729 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           G    P  SGW+LV+VD E+DVLL+GDDPWE FV  V  I+ILSP +V++M E+G++
Sbjct: 398 GLLTRPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVEQMSEEGMK 454


>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
 gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
          Length = 795

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/350 (63%), Positives = 271/350 (77%), Gaps = 3/350 (0%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q + G+   L+SE+WHACAGPLV LP VG RVVYFPQGH EQVAA+TN+  D  +P+Y N
Sbjct: 24  QPNHGNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHY-N 82

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           LP Q+ C+L N+T+ AD ETDEV+AQMTL P + +  +      EL    K+  + FCK 
Sbjct: 83  LPSQIYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCPKRKLSMFCKN 142

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT+SDTSTHGGFSVPRRAAE+  P LD+   PPAQEL+A+DLH VEWKFRHI+RGQP+RH
Sbjct: 143 LTSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRH 202

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPP-TVMPSSVLSSDSMHIGL 249
           LLTTGWSVFVS K+LVAGD+VLF+  +  +L +G+RRA+R   +V  SS+LSS SMH+G+
Sbjct: 203 LLTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGV 262

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHA +T + FT+F+NPRASP+EFV+P  KYVKA  H  +SVGMRF+M FETEESS 
Sbjct: 263 LAAAAHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHN-LSVGMRFKMRFETEESSE 321

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           RRYMGTITG+ D+D  RW NS WR ++VGWDE TA ERQ RVS WEIEP 
Sbjct: 322 RRYMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPF 371



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 73/107 (68%), Gaps = 7/107 (6%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           RT  KV+  G+ VGR++D+S+FS Y+EL  EL Q+FG++   +DP  SGWQ+V+ D E D
Sbjct: 663 RTCTKVHLQGAAVGRAVDLSKFSCYSELLLELQQLFGLDNALDDP-DSGWQVVYTDNEGD 721

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQK-----MGEQGVESFSPSS 791
           +LL+GDDPW+ F + V  I+ILSP +V+K     +G+  V    PS+
Sbjct: 722 MLLVGDDPWQEFCNMVRNIRILSPAEVEKLTQGALGKSAVVEEEPST 768


>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
 gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
          Length = 316

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/311 (69%), Positives = 255/311 (81%), Gaps = 3/311 (0%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q   G  K +NSELW+ACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPN
Sbjct: 8   QDQSGTRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATSQIPNYPN 67

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCK 129
           LP QL+CQ+HNVT+HAD +TDE++AQM+LQP++ E  KD F   + G+ PSK P+ +FCK
Sbjct: 68  LPSQLLCQVHNVTLHADKDTDEIHAQMSLQPVNSE--KDVFPVPDFGLKPSKHPSEFFCK 125

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
            LTASDTSTHGGFSVPRRAAEK+FP LD+S+QPP+QEL+ RDLHD  W FRHI+RGQPKR
Sbjct: 126 ALTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRHIYRGQPKR 185

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FV +KRL AGDSVLFI NEK+ L++G+R A R  T +PSSVLS+DSMHIG+
Sbjct: 186 HLLTTGWSLFVGSKRLKAGDSVLFIRNEKSHLMVGVRHANRQQTTLPSSVLSADSMHIGV 245

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHAA   S FT+F+NPRA PS+FVIPL K+ K VF T+VSVGMRF M+FETEES  
Sbjct: 246 LAAAAHAAGNRSPFTIFYNPRACPSDFVIPLIKFRKTVFGTQVSVGMRFGMMFETEESGK 305

Query: 310 RRYMGTITGIS 320
           RRYMGTI GIS
Sbjct: 306 RRYMGTIVGIS 316


>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
 gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
          Length = 396

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/350 (63%), Positives = 271/350 (77%), Gaps = 3/350 (0%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           Q + G+   L+SE+WHACAGPLV LP VG RVVYFPQGH EQVAA+TN+  D  +P+Y N
Sbjct: 24  QPNHGNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHY-N 82

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           LP Q+ C+L N+T+ AD ETDEV+AQMTL P + +  +      EL    K+  + FCK 
Sbjct: 83  LPSQIYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCPKRKLSMFCKN 142

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT+SDTSTHGGFSVPRRAAE+  P LD+   PPAQEL+A+DLH VEWKFRHI+RGQP+RH
Sbjct: 143 LTSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRH 202

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPP-TVMPSSVLSSDSMHIGL 249
           LLTTGWSVFVS K+LVAGD+VLF+  +  +L +G+RRA+R   +V  SS+LSS SMH+G+
Sbjct: 203 LLTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGV 262

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHA +T + FT+F+NPRASP+EFV+P  KYVKA  H  +SVGMRF+M FETEESS 
Sbjct: 263 LAAAAHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHN-LSVGMRFKMRFETEESSE 321

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           RRYMGTITG+ D+D  RW NS WR ++VGWDE TA ERQ RVS WEIEP 
Sbjct: 322 RRYMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPF 371


>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
 gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
          Length = 926

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/356 (62%), Positives = 260/356 (73%), Gaps = 34/356 (9%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP 
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPS 89

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD +TDEVYAQMTLQP++ E   D F    LG    SK PT YFCK L
Sbjct: 90  QLLCQVHNITLHADKDTDEVYAQMTLQPVNSE--TDVFPIPTLGAYTKSKHPTEYFCKNL 147

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 148 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 207

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI                             SMHIG+LA
Sbjct: 208 LTTGWSLFVGAKRLKAGDSVLFI-----------------------------SMHIGVLA 238

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           AAAHAA++ S FT+++NPR SPS FVIP+ +Y KA +  + SVGMRF M+FETEESS RR
Sbjct: 239 AAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATY-MQPSVGMRFAMMFETEESSKRR 297

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
           Y GT+ GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 298 YTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPS 353



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 14/178 (7%)

Query: 621 SQNSVVFGVHIDSSGLLLPTTVSS---FTTSVDPGV-SSMP-------LGDSGFHNSMYG 669
           SQ++ + G+H++S+   + TT  S    T   D G+ S +P       L     H +  G
Sbjct: 739 SQSANLSGLHMESTHRSINTTSCSQPMSTGGFDAGMYSKLPRLKESQILSLPEIHTNSMG 798

Query: 670 ---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 726
              C  D++E   +        P RT+ KV K GSVGRS+D++ F +Y+ELR  +  MFG
Sbjct: 799 TSACSMDATEYSLDRSAKPMKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFG 858

Query: 727 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           ++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E G+
Sbjct: 859 LQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGM 916


>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
          Length = 826

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 302/801 (37%), Positives = 422/801 (52%), Gaps = 108/801 (13%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELW ACAGPL S+P +G +V YFPQGH EQV A+TN   +       NLP ++ C+L N+
Sbjct: 31  ELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNM 90

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDT-----FVPIELGIPSKQPT-------NYFCKT 130
            + A+ +TDEVYAQ+TL P   +++  +         E  +P   P        + FCKT
Sbjct: 91  ELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSFCKT 150

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQPRRH 210

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+L
Sbjct: 211 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVL 270

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A A HA  T S FTV++ PR SP+EFV+   +Y +++     S+GMRFRM FE EE++ +
Sbjct: 271 ATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESL-KRNYSIGMRFRMRFEGEEAAEQ 329

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLF 369
           R+ GTI GI   DP  W++S WRS+KV WDE+++  R  RVS W+IEP ++  P+ P   
Sbjct: 330 RFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP--L 387

Query: 370 PLRLKRPWHPSTSSFND----NRDETASGL------NWLRGGTGEQGLTTL--------- 410
           P+R KR      +S +D    NR E AS +      N L      QG T L         
Sbjct: 388 PVRFKRSRSSVNASPSDVSTVNR-EVASKVMVESQQNNLPRALHNQGRTQLTGRYRDSTD 446

Query: 411 --NFQSLGMFP--WMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYL 466
               Q L M+     QQR       N+   Q +  L    QS  P  + + QL   FQ L
Sbjct: 447 VKTAQDLTMWSSGTEQQR-------NNIAAQTKRCLEGWTQSRTP--EGYNQLFSAFQPL 497

Query: 467 QQSGSQNPLQ-LKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQI--RTDELLQRQQS 523
           +   + NPL+    +    +       D     QQ   +M H  L     +      QQ+
Sbjct: 498 KD--AHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTLSFMPHSSGFRMIQQN 555

Query: 524 NLPSPSFSKANFMDSSTEIS----VSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFP 579
           NL +P    ANF   S   S    V+        GS+   S    +   A  S++R Q  
Sbjct: 556 NLVTP--EAANFTGKSAFTSLQGHVTDQCSTGWFGSIESNS----HTDHASSSLIRSQ-- 607

Query: 580 QQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLP 639
                                           +G +   T   +  +FG+ + S     P
Sbjct: 608 -----------------------------PLVIGNDVQKTKGTSFKLFGIPLGSPEKSEP 638

Query: 640 TTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 699
             VS  + + D  + + P  ++          +  SE   N+    Q + TR+  KV+K 
Sbjct: 639 -LVSPPSVAYDGKLQTSPTDNN----------EPCSEATQNIQNKVQSSSTRSCKKVHKQ 687

Query: 700 GS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 758
           GS +GRS+D+++F+ Y+EL  EL QMF  +G+ + P R+ W +V+ D E D++L+GDDPW
Sbjct: 688 GSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCRN-WLVVYTDNEGDMMLVGDDPW 746

Query: 759 EAFVSNVWYIKILSPEDVQKM 779
             F   V  I I + E+V++M
Sbjct: 747 NEFCDMVHKIFIYTREEVERM 767


>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
 gi|224028731|gb|ACN33441.1| unknown [Zea mays]
 gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
 gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
          Length = 813

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 302/801 (37%), Positives = 422/801 (52%), Gaps = 108/801 (13%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELW ACAGPL S+P +G +V YFPQGH EQV A+TN   +       NLP ++ C+L N+
Sbjct: 31  ELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNM 90

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDT-----FVPIELGIPSKQPT-------NYFCKT 130
            + A+ +TDEVYAQ+TL P   +++  +         E  +P   P        + FCKT
Sbjct: 91  ELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSFCKT 150

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQPRRH 210

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+L
Sbjct: 211 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVL 270

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A A HA  T S FTV++ PR SP+EFV+   +Y +++     S+GMRFRM FE EE++ +
Sbjct: 271 ATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESL-KRNYSIGMRFRMRFEGEEAAEQ 329

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLF 369
           R+ GTI GI   DP  W++S WRS+KV WDE+++  R  RVS W+IEP ++  P+ P   
Sbjct: 330 RFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP--L 387

Query: 370 PLRLKRPWHPSTSSFND----NRDETASGL------NWLRGGTGEQGLTTL--------- 410
           P+R KR      +S +D    NR E AS +      N L      QG T L         
Sbjct: 388 PVRFKRSRSSVNASPSDVSTVNR-EVASKVMVESQQNNLPRALHNQGRTQLTGRYRDSTD 446

Query: 411 --NFQSLGMFP--WMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYL 466
               Q L M+     QQR       N+   Q +  L    QS  P  + + QL   FQ L
Sbjct: 447 VKTAQDLTMWSSGTEQQR-------NNIAAQTKRCLEGWTQSRTP--EGYNQLFSAFQPL 497

Query: 467 QQSGSQNPLQ-LKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQI--RTDELLQRQQS 523
           +   + NPL+    +    +       D     QQ   +M H  L     +      QQ+
Sbjct: 498 KD--AHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTLSFMPHSSGFRMIQQN 555

Query: 524 NLPSPSFSKANFMDSSTEIS----VSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFP 579
           NL +P    ANF   S   S    V+        GS+   S    +   A  S++R Q  
Sbjct: 556 NLVTP--EAANFTGKSAFTSLQGHVTDQCSTGWFGSIESNS----HTDHASSSLIRSQ-- 607

Query: 580 QQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLP 639
                                           +G +   T   +  +FG+ + S     P
Sbjct: 608 -----------------------------PLVIGNDVQKTKGTSFKLFGIPLGSPEKSEP 638

Query: 640 TTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 699
             VS  + + D  + + P  ++          +  SE   N+    Q + TR+  KV+K 
Sbjct: 639 -LVSPPSVAYDGKLQTSPTDNN----------EPCSEATQNIQNKVQSSSTRSCKKVHKQ 687

Query: 700 GS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 758
           GS +GRS+D+++F+ Y+EL  EL QMF  +G+ + P R+ W +V+ D E D++L+GDDPW
Sbjct: 688 GSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCRN-WLVVYTDNEGDMMLVGDDPW 746

Query: 759 EAFVSNVWYIKILSPEDVQKM 779
             F   V  I I + E+V++M
Sbjct: 747 NEFCDMVHKIFIYTREEVERM 767


>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
          Length = 739

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/299 (75%), Positives = 244/299 (81%), Gaps = 8/299 (2%)

Query: 168 IARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 227
           +A+DLH  EWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRR
Sbjct: 1   MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60

Query: 228 AIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV 287
           A RP TVMPSSVLSSDSMHIGLLAAAAHAA+TNS FT+F+NPRASPSEFVIPL KYVKAV
Sbjct: 61  ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120

Query: 288 FHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGER 347
           +HTR+SVGMRFRMLFETEESSVRRYMGTITGI DLD VRW NSHWRSVKVGWDESTAGER
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180

Query: 348 QPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDET-ASGLNWLRGGTGEQG 406
           QPRVSLWEIEPLTTFPMYPS FPLRLKRPW     S +  +D+  A+ L WLR  T   G
Sbjct: 181 QPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSLHGGKDDDLANSLMWLR-DTANPG 239

Query: 407 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQ---FMQLQQP 462
             +LNF  LGM PWMQ R++ + LG   +  YQAM  A  Q  D  +Q     +Q QQP
Sbjct: 240 FQSLNFGGLGMSPWMQPRLDATLLGLQPD-MYQAMATAAFQ--DATKQASPTMLQFQQP 295


>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
          Length = 813

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 302/801 (37%), Positives = 422/801 (52%), Gaps = 108/801 (13%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELW ACAGPL S+P +G +V YFPQGH EQV A+TN   +       NLP ++ C+L N+
Sbjct: 31  ELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNM 90

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDT-----FVPIELGIPSKQPT-------NYFCKT 130
            + A+ +TDEVYAQ+TL P   +++  +         E  +P   P        + FCKT
Sbjct: 91  ELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSFCKT 150

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFRGQPRRH 210

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+L
Sbjct: 211 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVL 270

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A A HA  T S FTV++ PR SP+EFV+   +Y +++     S+GMRFRM FE EE++ +
Sbjct: 271 ATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESL-KRNYSIGMRFRMRFEGEEAAEQ 329

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLF 369
           R+ GTI GI   DP  W++S WRS+KV WDE+++  R  RVS W+IEP ++  P+ P   
Sbjct: 330 RFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP--L 387

Query: 370 PLRLKRPWHPSTSSFND----NRDETASGL------NWLRGGTGEQGLTTL--------- 410
           P+R KR      +S +D    NR E AS +      N L      QG T L         
Sbjct: 388 PVRFKRSRSSVNASPSDVSTVNR-EVASKVMVESQQNNLPRALHNQGRTQLTGRYRDSTD 446

Query: 411 --NFQSLGMFP--WMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYL 466
               Q L M+     QQR       N+   Q +  L    QS  P  + + QL   FQ L
Sbjct: 447 VKTAQDLTMWSSGTEQQR-------NNIAAQTKRCLEGWTQSRTP--EGYNQLFSAFQPL 497

Query: 467 QQSGSQNPLQ-LKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQI--RTDELLQRQQS 523
           +   + NPL+    +    +       D     QQ   +M H  L     +      QQ+
Sbjct: 498 KD--AHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTLSFMPHSSGFRMIQQN 555

Query: 524 NLPSPSFSKANFMDSSTEIS----VSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFP 579
           NL +P    ANF   S   S    V+        GS+   S    +   A  S++R Q  
Sbjct: 556 NLVTP--EAANFTGKSAFTSLQGHVTDQCSTGWFGSIESNS----HTDHASSSLIRSQ-- 607

Query: 580 QQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLP 639
                                           +G +   T   +  +FG+ + S     P
Sbjct: 608 -----------------------------PLVIGNDVQKTKGTSFKLFGIPLGSPEKSEP 638

Query: 640 TTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 699
             VS  + + D  + + P  ++          +  SE   N+    Q + TR+  KV+K 
Sbjct: 639 -LVSPPSVAYDGKLQTSPTDNN----------EPCSEATQNIQNKVQSSSTRSCKKVHKQ 687

Query: 700 GS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 758
           GS +GRS+D+++F+ Y+EL  EL QMF  +G+ + P R+ W +V+ D E D++L+GDDPW
Sbjct: 688 GSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCRN-WLVVYTDNEGDMMLVGDDPW 746

Query: 759 EAFVSNVWYIKILSPEDVQKM 779
             F   V  I I + E+V++M
Sbjct: 747 NEFCDMVHKIFIYTREEVERM 767


>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
 gi|238015272|gb|ACR38671.1| unknown [Zea mays]
          Length = 534

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/299 (75%), Positives = 244/299 (81%), Gaps = 8/299 (2%)

Query: 168 IARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 227
           +A+DLH  EWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRR
Sbjct: 1   MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60

Query: 228 AIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV 287
           A RP TVMPSSVLSSDSMHIGLLAAAAHAA+TNS FT+F+NPRASPSEFVIPL KYVKAV
Sbjct: 61  ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120

Query: 288 FHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGER 347
           +HTR+SVGMRFRMLFETEESSVRRYMGTITGI DLD VRW NSHWRSVKVGWDESTAGER
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180

Query: 348 QPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNR-DETASGLNWLRGGTGEQG 406
           QPRVSLWEIEPLTTFPMYPS FPLRLKRPW     S +  + D+ A+ L WLR  T   G
Sbjct: 181 QPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSLHGGKDDDLANSLMWLR-DTANPG 239

Query: 407 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQ---FMQLQQP 462
             +LNF  LGM PWMQ R++ + LG   +  YQAM  A  Q  D  +Q     +Q QQP
Sbjct: 240 FQSLNFGGLGMSPWMQPRLDATLLGLQPD-MYQAMATAAFQ--DATKQASPTMLQFQQP 295


>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
 gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
          Length = 781

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/365 (60%), Positives = 267/365 (73%), Gaps = 12/365 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEV-DSHIPNYPNLPPQLICQ 78
           L+SE WHACAGPLV LP VG RVVYFPQGH EQV A+TN+   D  IP Y NLP Q+ C+
Sbjct: 72  LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQY-NLPSQIFCR 130

Query: 79  LHNVTMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           + N+++ A  ETDEVYAQMTL P        +S ++   +    E    SK   + FCK 
Sbjct: 131 VLNLSLGAYRETDEVYAQMTLVPENELFYIRISDQQLDQSLELDEPTASSKAKLSMFCKN 190

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT+SDTSTHGGFSVPRRAAE+ FP LD+   PPAQE+IA+DLH +EWKFRHI+RGQP+RH
Sbjct: 191 LTSSDTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPRRH 250

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-PTVMPSSVLSSDSMHIGL 249
           LLTTGWSVFVS K+LVAGD+VLF+  +  +L +GIRRA+R   +V  SS+LSS SM IG+
Sbjct: 251 LLTTGWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGV 310

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LAAAAHA +T + FTVF+NPRASP+EFV+P  KYVK+ F   + +GMRF+M FETE+SS 
Sbjct: 311 LAAAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKS-FKMNILIGMRFKMRFETEDSSE 369

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRYMGTITGI D+DP RW  S WR +KVGWDE  A ERQ RVS WEIEP     + P + 
Sbjct: 370 RRYMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAPNVTPPVS 429

Query: 370 PLRLK 374
             R +
Sbjct: 430 TKRFR 434



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 689 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           P+RT  KV+K G+VGR+LD+S+F  Y +L EEL  +FGI+        S WQ V+VD E 
Sbjct: 663 PSRTCTKVHKHGAVGRALDLSKFRGYTQLLEELQHLFGIDESLNG---SEWQTVYVDNEG 719

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDPVGS 808
           D+LL+GDDPWE F + V  I+ILSP ++QK+  Q   S +     R + + +    P  S
Sbjct: 720 DMLLVGDDPWEEFCTTVRCIRILSPAEIQKLTVQARNSSTEEPSSRLSDQQDSSSPPATS 779

Query: 809 LE 810
            E
Sbjct: 780 DE 781


>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
          Length = 958

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/362 (58%), Positives = 265/362 (73%), Gaps = 9/362 (2%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQLIC 77
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQV  +   +        P +LPPQ+ C
Sbjct: 33  CL--ELWHACAGPLISLPRKGSLVVYFPQGHMEQVTTSLKHQCLEQRQMRPYDLPPQIFC 90

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPE----EQKDTFVPIELGIPSKQPTNYFCKTLTA 133
           ++ NV +HAD ETDEVYAQ+TL P  PE    + ++     E G+ +K   + FCKTLTA
Sbjct: 91  RVLNVNLHADQETDEVYAQVTLVP-EPEPAEKDLEEEEEDEEAGVLNKSTPHMFCKTLTA 149

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLLT
Sbjct: 150 SDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 209

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVFV+ K L++GD+VLF+  E  +L LGIRRA R  +V+PSSVLSS SMH+G+LA+A
Sbjct: 210 TGWSVFVNHKGLMSGDAVLFLRGENGELRLGIRRAARQQSVIPSSVLSSQSMHLGVLASA 269

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A+A AT S F +F+NPRASP+EF+IP  KYVK+  +  +S+GMRF+M FETE+++ RRY 
Sbjct: 270 ANAVATKSMFHIFYNPRASPAEFLIPYHKYVKSC-NLPLSIGMRFKMRFETEDTAERRYT 328

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           G ITGI D+DP +W  S WRS+ VGWDE  A E+Q RVS WEIEP  +          R+
Sbjct: 329 GIITGIGDVDPAKWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPCISVAGLNVSSGTRI 388

Query: 374 KR 375
           KR
Sbjct: 389 KR 390



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 63/91 (69%), Gaps = 2/91 (2%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R   KV+K G+ VGR++D+S+   Y+EL  EL ++F +EG   DP + GWQ+V+ D END
Sbjct: 830 RKCTKVHKQGNIVGRAVDLSKLDGYDELISELERLFNMEGLLNDPEK-GWQVVYTDNEND 888

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           ++L+GDDPW+ F + V  I I + E+V+KM 
Sbjct: 889 IMLVGDDPWQEFCNIVCKILIYTHEEVEKMA 919


>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
          Length = 1183

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/412 (58%), Positives = 279/412 (67%), Gaps = 53/412 (12%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQ                      
Sbjct: 85  GERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQ---------------------- 122

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 133
                      AD ETDEVYAQMTLQP      K+  +  +LG+  S+QP  +FCKTLTA
Sbjct: 123 -----------ADAETDEVYAQMTLQPYD----KEALLASDLGLKQSRQPVEFFCKTLTA 167

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 168 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLT 227

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV+S DSMHIG+LAAA
Sbjct: 228 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAA 287

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           AHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 288 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFRMMFETEESGVRRYM 346

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GTITGIS+L             K    + +AGER  RVS+WEIEP+ T P Y  L P   
Sbjct: 347 GTITGISELRCCAME-------KFTMAQPSAGERPSRVSIWEIEPVVT-PFY--LCPPPF 396

Query: 374 KRPWHPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTTLNFQSLGMFPWM 421
            RP  P    F D+  +  S    G+ WL    G +   +  F  L +  WM
Sbjct: 397 FRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPGLNLVQWM 448



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 82/119 (68%), Gaps = 4/119 (3%)

Query: 669  GCMQD----SSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 724
            GC  D     + +L N    +Q    RT+ KV K GSVGRS+D++R+  Y+ELR +L +M
Sbjct: 1030 GCSNDVAITETGVLSNGLWTNQAQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARM 1089

Query: 725  FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            FGIEG+ EDP R+ W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 1090 FGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDG 1148


>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
 gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
          Length = 774

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/363 (62%), Positives = 269/363 (74%), Gaps = 16/363 (4%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEV-DSHIPNYPNLPPQLICQ 78
           L+SE WHACAGPLV LP VG RVVYFPQGH EQV A+TN+   D  IP Y NLP Q+ C+
Sbjct: 72  LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQY-NLPSQIFCR 130

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTLTASD 135
           + N+++ A  ETDEVYAQMTL P +  EQ D    +EL  P   SK   + F K LT+SD
Sbjct: 131 VLNLSLGAYRETDEVYAQMTLVPEN--EQLDQ--SLELDEPTASSKAKLSMFSKNLTSSD 186

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAE+ FP LD+   PPAQE+IA+DLH VEWKFRHI+RGQP+RHLLTTG
Sbjct: 187 TSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLLTTG 246

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-PTVMPSSVLSSDSMHIGLLAAAA 254
           WSVFVS K+LVAGD+VLF+  +  +L +GIRRA+R   +V  SS+LSS SM IG+LAAAA
Sbjct: 247 WSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAA 306

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR--RY 312
           HA +T + FTVF+NPRASP+EFV+P  KYVK+ F   + +GMRF+M FETE+SS R  RY
Sbjct: 307 HAVSTKTMFTVFYNPRASPAEFVVPYHKYVKS-FKMNILIGMRFKMRFETEDSSERSVRY 365

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           MGTITGI D+DP RW  S WR +KVGWDE  A ERQ RVS WEIEP     + P   P+ 
Sbjct: 366 MGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAPNVTP---PVS 422

Query: 373 LKR 375
            KR
Sbjct: 423 TKR 425



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 689 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           P+RT  KV+K G+VGR+LD+S+F  Y +L EEL  +FGI+        S WQ V+VD E 
Sbjct: 656 PSRTCTKVHKHGAVGRALDLSKFRGYTQLLEELQHLFGIDESLNG---SEWQAVYVDNEG 712

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDPVGS 808
           D+LL+GDDPWE F S V  I+ILSP ++QK+  Q   S +     R + + +    P  S
Sbjct: 713 DMLLVGDDPWEEFCSTVRCIRILSPAEIQKLTVQARNSSTEEPSSRLSDQQDSSSPPATS 772

Query: 809 LE 810
            E
Sbjct: 773 DE 774


>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
          Length = 1474

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/360 (61%), Positives = 273/360 (75%), Gaps = 10/360 (2%)

Query: 67  NYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTN 125
           +YPNLP +LIC L NVT++AD ET+EVYAQMTLQP++ +  +D  +  ++G+  ++QP  
Sbjct: 350 SYPNLPSKLICMLQNVTLNADPETEEVYAQMTLQPVN-KYDRDALLASDMGLKINRQPNE 408

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
           +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHIFRG
Sbjct: 409 FFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIFRG 468

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QPKRHLLTTGWSVFVS KRL AGDSVLF+ + K QLLLGIRRA R    + SSV+SSDSM
Sbjct: 469 QPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSM 528

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           HIG+LAAAAHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+FETE
Sbjct: 529 HIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETE 587

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           E  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T P Y
Sbjct: 588 ECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY 646

Query: 366 PSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 421
             + P    RP         D+  +  S L     WL  G   +  ++  F  L +  WM
Sbjct: 647 --ICPPPFFRPRFAGQPGMPDDGTDMESALKRAMPWLDNGLEMKDPSSTIFPGLSLVQWM 704



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 190/403 (47%), Positives = 238/403 (59%), Gaps = 80/403 (19%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S++G+     EG+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSE            
Sbjct: 5   SSNGVSPNPMEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSE------------ 52

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP 123
                                       +V A M       ++Q D F+P    +PSK  
Sbjct: 53  ----------------------------QVAASM-------QKQTD-FIPSYPNLPSKLI 76

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW-KFRHI 182
                 TL A D  T           E+V+  +  +LQP         ++ V +    + 
Sbjct: 77  CMLQNVTLNA-DPET-----------EEVYAQM--TLQP---------VNKVRYLSLYNS 113

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           F GQPKRHLLTTGWSVFVS KRL AGDSVLF+ + K QLLLGIRRA R    + SSV+SS
Sbjct: 114 FLGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISS 173

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
           DSMHIG+LAAAAHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+F
Sbjct: 174 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIF 232

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           ETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T 
Sbjct: 233 ETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT- 291

Query: 363 PMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGG 401
           P Y  + P    RP         D+  +  S L     WL  G
Sbjct: 292 PFY--ICPPPFFRPRFAGQPGMPDDGTDMESALKRAMPWLDNG 332



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 83/112 (74%), Gaps = 1/112 (0%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDPL S W+LV+VD END+
Sbjct: 1347 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPLTSDWKLVYVDHENDI 1406

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 802
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P++ Q A S G+ G
Sbjct: 1407 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGLPATNQ-ACSGGDNG 1457


>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
          Length = 975

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/349 (63%), Positives = 258/349 (73%), Gaps = 44/349 (12%)

Query: 14  EGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           EG+ K   +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQ                   
Sbjct: 25  EGEKKAPPINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQF------------------ 66

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKT 130
                     + +   V  D+ Y +  LQ LS           EL +   +P T +FCKT
Sbjct: 67  ----------LDIKLTVNGDQ-YGKEALQ-LS-----------ELALKQPRPQTEFFCKT 103

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE+ ARDLHD  W FRHI+RGQPKRH
Sbjct: 104 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRH 163

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FVS KRL+AGDSV+F+ +EK QLLLG RRA R PT + SSVLSSDSMHIG+L
Sbjct: 164 LLTTGWSLFVSGKRLLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSVLSSDSMHIGIL 223

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           AAAAHAAA NS FT+F+NPRASP+EFV+P  KY KA++  ++S+GMRFRM+FETEE   R
Sbjct: 224 AAAAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTR 283

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           RYMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+
Sbjct: 284 RYMGTITGISDLDPVRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEPV 332



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 74/97 (76%)

Query: 687 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           L   RTF KVYK G+VGRS+DIS+FS Y+EL+  L +MF +EG+ E+  R GW+LV+ D 
Sbjct: 838 LKRMRTFTKVYKRGAVGRSIDISQFSGYDELKHALARMFSMEGQLEERQRIGWKLVYKDH 897

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           E+D+LLLGDDPWE FV+ V  I+ILSP++VQ++   G
Sbjct: 898 EDDILLLGDDPWEEFVNCVKCIRILSPQEVQQISLDG 934


>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
          Length = 912

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/406 (54%), Positives = 272/406 (66%), Gaps = 49/406 (12%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQ--------------------------- 52
           + SELWHACAGPL+SLP  G+ VVYFPQGH EQ                           
Sbjct: 29  ICSELWHACAGPLISLPPKGSLVVYFPQGHMEQLIDNDPHKFGFDSPLKFTPPVAPVLEK 88

Query: 53  -------VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPE 105
                  VAA+  + VD   P Y NLPPQ++C++ NV +HAD E DEVYAQ+TL P S +
Sbjct: 89  TAVASMHVAASIKQGVDQQTPPY-NLPPQILCRVLNVNLHADQEMDEVYAQLTLVPESEK 147

Query: 106 EQKDTFVPIELGIPSKQPT--NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPP 163
            +K     +E  +P+      + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++ Q P
Sbjct: 148 SEK----CMEEQVPASTSCTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRP 203

Query: 164 AQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLL 223
           +QEL+A+DLH  EW+FRHIFRGQP+RHLLTTGWSVFVS KRLV+GD+VLF+  E  +L L
Sbjct: 204 SQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGDAVLFLRGENGELRL 263

Query: 224 GIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKY 283
           GIRRA R  +   SSVLSS SMH+G+L AAAHA AT S F +FFNPR SP+EFVIP  KY
Sbjct: 264 GIRRASRQQSYASSSVLSSQSMHLGVLTAAAHAVATKSMFHIFFNPRTSPAEFVIPYHKY 323

Query: 284 VKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 343
           VK+  H  +++GMRF+M FETE+++ RRY GTITGI D++P RW  S WRS+KV WDE  
Sbjct: 324 VKSFNHP-LAIGMRFKMRFETEDAAERRYTGTITGIGDVEPARWPGSKWRSLKVEWDEHA 382

Query: 344 AGERQPRVSLWEIEPLTT-----FPMYPSLFPLRLKRPWHPSTSSF 384
           A ERQ RVS WEIEP  +      P  P +   RL+  + P+++  
Sbjct: 383 ANERQERVSPWEIEPFISSTGLNIPAGPRI--KRLRTSFQPTSTDL 426



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+K G +VGR++D+S+F  Y+EL  EL ++F +E    DP + GW +V+ D E D
Sbjct: 784 RSCTKVHKQGNAVGRAVDLSKFHGYDELIRELERLFNMENLLSDPEK-GWHVVYTDNEGD 842

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW+ F S V  I I + E+V+KM
Sbjct: 843 IMLVGDDPWQEFCSIVCKIMIYTREEVEKM 872


>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
          Length = 737

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/367 (55%), Positives = 261/367 (71%), Gaps = 6/367 (1%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G    N  L +ELWHACAGPLVS+P +G +V YFPQGH+EQV  +TN+  D  +PNY +L
Sbjct: 34  GFRDANDGLYTELWHACAGPLVSVPQMGDKVFYFPQGHTEQVEKSTNQGADQPMPNY-DL 92

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKT 130
           P +++C++ NV + A+ +TDEVYAQ+TL P  P + + T     +  P ++P  Y FCKT
Sbjct: 93  PSKILCRVVNVWLKAEPDTDEVYAQLTLIP-EPNQDETTLEKETVQSPPRRPHVYSFCKT 151

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV RR AE+  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RH
Sbjct: 152 LTASDTSTHGGFSVLRRHAEECLPRLDMSQQPPTQELVAKDLHGVEWRFRHIFRGQPRRH 211

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    MP+SV+SS SMH+G+L
Sbjct: 212 LLTTGWSAFVSSKRLVAGDAFIFLRGENGELRVGVRRALRQQNNMPTSVISSHSMHLGVL 271

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A A HA +T + F+VF+ PR SPSEFVIP  +Y+++V     S+GMRFRM FE EE+  +
Sbjct: 272 ATAMHAFSTGTMFSVFYRPRTSPSEFVIPYDQYMESV-KNNYSIGMRFRMRFEGEETPEQ 330

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLF 369
           R+ GTI G+ D D  RW  S WR +KV WDE ++ ER  RVS W+IEP      + P   
Sbjct: 331 RFTGTIVGVEDYDSNRWPASKWRCLKVQWDEQSSVERPLRVSPWKIEPSAAPTAINPPPI 390

Query: 370 PLRLKRP 376
           P R KRP
Sbjct: 391 P-RAKRP 396



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 686 QLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q T TR+  KV+  G ++GRS+D+++F  Y +L  EL +MFG EG+  DP++ GWQ+V+ 
Sbjct: 607 QSTSTRSCTKVHMQGNALGRSVDLTKFKGYKDLVAELDRMFGFEGELMDPMK-GWQVVYT 665

Query: 745 DRENDVLLLGDDPWEAFVSN---VWYIKILSPEDVQKM 779
           D E D++L+GDDPW+ +      V  I I + E+VQ+M
Sbjct: 666 DDEGDMMLVGDDPWQRYREXCVMVRKIYIYTREEVQRM 703


>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
          Length = 920

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/397 (55%), Positives = 274/397 (69%), Gaps = 42/397 (10%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVA-------------------- 54
           G++ C   ELWHACAGPL+SLP  G+RVVYFPQGH EQ+A                    
Sbjct: 32  GNSVC--PELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGSFLNINQAVT 89

Query: 55  ----------------ATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMT 98
                           ++ ++ V+  + +Y  LPPQ++C++ NV +HAD E DEVYAQ+T
Sbjct: 90  PMAEEASSAASLNIPPSSISQAVNQQMLSY-KLPPQILCRVLNVNLHADQEMDEVYAQLT 148

Query: 99  LQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDF 158
           L P S  E+ +  +  +L +P     + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+
Sbjct: 149 LVPDS--EKSEKCIEEQLPVPPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY 206

Query: 159 SLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEK 218
           S Q P+QEL+A+DLH  EW+FRHIFRGQP+RHLLTTGWSVFVS KRLVAGD+VLF+ +E 
Sbjct: 207 SQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDEN 266

Query: 219 NQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVI 278
            +L LGIRRA +  + +PSSVLSS  +H G+LAA AHA AT S F +F+NPR SP+EFVI
Sbjct: 267 GELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIFYNPRTSPTEFVI 326

Query: 279 PLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVG 338
           P  KYVK+  H+  S+GMRF+M FETE+++ RRY GTI GI D+DP+RW NS WRS KVG
Sbjct: 327 PYHKYVKSFNHS-FSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSEWRSFKVG 385

Query: 339 WDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           WDE  A ERQ RVS WEIEP T+     +L   R+KR
Sbjct: 386 WDEHAAQERQERVSPWEIEPFTSATGLNALPGPRVKR 422



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 28/183 (15%)

Query: 622 QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSS-----MPLGDSGFHNSMYGCMQDSSE 676
           +N  +FG  +      +   +SS  T  + GVSS     +P GD  F  +       S +
Sbjct: 701 RNCKLFGFSLLKESACVDDPISSAMT--EDGVSSDGGLHVPPGDGPFQTAHSKHSDQSEK 758

Query: 677 LLHN--------------VGQIDQLTPT-----RTFVKVYKSG-SVGRSLDISRFSSYNE 716
            LHN              +    +L  +     R+  KV+K G +VGR++D+S+   Y+E
Sbjct: 759 ELHNHYGHEITLRSMEQEISSYAKLRNSVQASGRSCTKVHKQGNAVGRAVDLSKLRGYDE 818

Query: 717 LREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           L  EL  +F +EG    P + GW +V+ D E D++L+GDDPW+ F + V  I I + E+V
Sbjct: 819 LIRELEHLFNMEGLLSTPEK-GWHIVYTDNEGDIMLVGDDPWQEFCNIVCKILICTQEEV 877

Query: 777 QKM 779
           QKM
Sbjct: 878 QKM 880


>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
 gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
          Length = 1031

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/394 (58%), Positives = 274/394 (69%), Gaps = 23/394 (5%)

Query: 84  MHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQP-TNYFCKTLTASDTSTHG 140
           M AD +TDEVYA+MTLQP+S   Q  K+T +  EL +   +P T +FCKTLTASDTSTHG
Sbjct: 1   MEADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHG 60

Query: 141 GFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFV 200
           GFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS+FV
Sbjct: 61  GFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFV 120

Query: 201 SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATN 260
           S KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA N
Sbjct: 121 SGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANN 180

Query: 261 SCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 320
           S FT+++NPRAS SEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTITGIS
Sbjct: 181 SQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGIS 240

Query: 321 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRPWHP 379
           DLDPVRW  SHWR+++V WDE+   ER+ RVSLWEIEP+   F +YPS      KRP  P
Sbjct: 241 DLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPL-FTAKRPRLP 299

Query: 380 STSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQS-----LGMFPWMQQR--------- 424
             +   D+  E    L       GE+     LN Q+     L +  WM  +         
Sbjct: 300 GMT---DDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPGTV 356

Query: 425 VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 458
           V+P  L +   +  Q + AA +        QF+Q
Sbjct: 357 VQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQ 390



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 129/238 (54%), Gaps = 37/238 (15%)

Query: 602  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSS-GLLLPTTVSSFTTSVDPGVSSM 656
            PSS++     KD    +E   TD +N+++FGV+ID   GL L   + +     D  +  +
Sbjct: 791  PSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQL 850

Query: 657  P-LGDSGFHNSMYGCMQDSSELL-HNVGQIDQL----------TP--------------- 689
            P  G S F +S     + SS ++ H+ G  D            TP               
Sbjct: 851  PGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQ 910

Query: 690  -TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
              RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E 
Sbjct: 911  RMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEK 970

Query: 749  DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 803
            DVLL+GDDPWE FV  V  I+ILSP++  +M   G+ G +SF P+    ++  G+  R
Sbjct: 971  DVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFG-DSFLPNQACSSSDGGHPWR 1027


>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
          Length = 919

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/389 (55%), Positives = 270/389 (69%), Gaps = 40/389 (10%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVA---------------------------- 54
           ELWHACAGPL+SLP  G+RVVYFPQGH EQ+A                            
Sbjct: 38  ELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHRGGRGSFLNVNHAAAPMAEEASS 97

Query: 55  --------ATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE 106
                   ++ ++ V+  + +Y  LPPQ++C++ NV +HAD E DEVYAQ+TL P S  E
Sbjct: 98  AAALNIPPSSISQAVNQQMLSY-KLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDS--E 154

Query: 107 QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 166
           + +  +  +L +P     + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QE
Sbjct: 155 KNEKCMEEQLSVPPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQE 214

Query: 167 LIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 226
           L+A+DLH  EW+FRHIFRGQP+RHLLTTGWSVFVS KRLVAGD+VLF+ +E  +L LGIR
Sbjct: 215 LVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIR 274

Query: 227 RAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKA 286
           RA +  + +PSSVLSS  +H G+LAA AHA AT S F +++NPR SP+EFVIP  KYVK+
Sbjct: 275 RASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIYYNPRTSPTEFVIPYHKYVKS 334

Query: 287 VFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 346
             H+  S+GMRF+M FETE+++ RRY GTI GI D+DP+RW NS WRS KVGWDE  A E
Sbjct: 335 FNHS-FSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSRWRSFKVGWDEHAAQE 393

Query: 347 RQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           RQ RVS WEIEP T+     +L   R+KR
Sbjct: 394 RQDRVSPWEIEPFTSATGLNALPGPRVKR 422



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+K G +VGR++D+S+   Y+EL  EL  +F +EG    P + GW +V+ D E D
Sbjct: 791 RSCTKVHKQGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEK-GWHIVYTDNEGD 849

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW+ F + V  I I + E+VQKM
Sbjct: 850 IMLVGDDPWQEFCNIVCKILICTQEEVQKM 879


>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
 gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/361 (53%), Positives = 259/361 (71%), Gaps = 5/361 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L +ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  D  +P Y +LPP+++C+
Sbjct: 49  ALYNELWHACAGPLVTVPREGDHVFYFPQGHLEQVEASTNQVADQQMPLY-DLPPKILCR 107

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEV+AQ+TL PL  +++  +        P +   + FCKTLTASDTST
Sbjct: 108 VVNVQLKAEPDTDEVFAQVTLLPLHNQDENASEKEPPPPPPPRFHVHSFCKTLTASDTST 167

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 168 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGSEWRFRHIFRGQPRRHLLQSGWSV 227

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA +
Sbjct: 228 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATAWHAVS 287

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SP+EF++P  +Y+++V  +  S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 288 TGTMFTVYYKPRTSPAEFIVPFDQYMESV-KSNYSIGMRFKMRFEGEEAPEQRFTGTIVG 346

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I D DP RW +S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 347 IEDADPSRWKDSKWRCLKVRWDETSTIPRPDRVSPWKIEPALA---PPALNPLPMPRPKR 403

Query: 379 P 379
           P
Sbjct: 404 P 404



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q + TR+  KV+K G ++GRS+D++RF++Y+EL  EL ++F   G+   P ++ W +V+ 
Sbjct: 723 QNSSTRSCTKVHKQGIALGRSVDLTRFNNYDELIAELDRLFEFNGELLAPQKN-WLIVYT 781

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D E+D++L+GDDPW+ FV  V  I I + E+VQ++
Sbjct: 782 DDEDDMMLVGDDPWQEFVGMVRKIVIYTREEVQRI 816


>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
          Length = 782

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/358 (53%), Positives = 257/358 (71%), Gaps = 4/358 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELWHACAGPLV++P  G +V YFPQGH EQV A+TN+  D  +P Y  LP +++C +
Sbjct: 55  LYNELWHACAGPLVTVPRRGEKVFYFPQGHIEQVEASTNQVSDQQMPIY-KLPSKILCTV 113

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            N+ + A+ +TDEV+AQMTL P S +++KD  +     + S+   + FCKTLTASDTSTH
Sbjct: 114 INIDLKAEPDTDEVFAQMTLVPESTQDEKDIIIETPPPLQSRPHVHSFCKTLTASDTSTH 173

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR A++  P LD   QPP+QEL+A+DLH  EW FRHIFRGQP+RHLL +GWSVF
Sbjct: 174 GGFSVLRRHADECLPPLDMCRQPPSQELVAKDLHGKEWSFRHIFRGQPRRHLLQSGWSVF 233

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A+HA  T
Sbjct: 234 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATASHAIQT 293

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + FTV++ PR SPSEF++P  +YV+++     S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 294 GTMFTVYYKPRTSPSEFIVPFAQYVESI-KKNYSIGMRFKMRFEGEEAPEQRFTGTIIGI 352

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRP 376
            D+D  RW  S WR +KV WDE T+  R  ++S W+IEP    P+  +  P+ R KRP
Sbjct: 353 GDVDSTRWPESKWRCLKVRWDEQTSVPRPDKISPWQIEPALA-PIALNPLPVSRTKRP 409



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 2/71 (2%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV K GS +GRS+D+++F+SY EL  EL  MF  +G+  +  ++ W +V+ D E 
Sbjct: 713 TRSCTKVQKQGSALGRSVDLAKFTSYEELITELDHMFEFQGELMNSNKN-WLVVYTDNEG 771

Query: 749 DVLLLGDDPWE 759
           D++L+GDDPWE
Sbjct: 772 DMMLVGDDPWE 782


>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
          Length = 859

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 379 PSTS 382
           P ++
Sbjct: 412 PRSN 415



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 790

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
          Length = 859

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 379 PSTS 382
           P ++
Sbjct: 412 PRSN 415



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 790

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
 gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
           protein; Short=ARF1-BP; AltName: Full=Protein
           MEGAINTEGUMENTA
 gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
 gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
 gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
 gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 859

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 379 PSTS 382
           P ++
Sbjct: 412 PRSN 415



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 790

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 853

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 379 PSTS 382
           P ++
Sbjct: 412 PRSN 415



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 790

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
          Length = 851

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/366 (52%), Positives = 259/366 (70%), Gaps = 5/366 (1%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +  L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +++
Sbjct: 51  DAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKIL 109

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ NV + A+ +TDEVYAQ+TL P   +++           P +   + FCKTLTASDT
Sbjct: 110 CRVINVDLKAEADTDEVYAQITLLPEPVQDENAIEKESPPPPPPRFQVHSFCKTLTASDT 169

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GW
Sbjct: 170 STHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGW 229

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA
Sbjct: 230 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 289

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
            +T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI
Sbjct: 290 ISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTI 348

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            GI D DP RW+ S WRS+KV WDE+T+  R  RVS W+IEP  +    P+L P+ + RP
Sbjct: 349 VGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALS---PPALSPVPMPRP 405

Query: 377 WHPSTS 382
             P ++
Sbjct: 406 KRPRSN 411



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D END
Sbjct: 725 RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFNGELMAP-KKDWLIVYTDDEND 783

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 784 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 813


>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
          Length = 848

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 257/364 (70%), Gaps = 5/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +++C+
Sbjct: 52  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKILCR 110

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEVYAQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 111 VINVDLKAEADTDEVYAQITLLPEPVQDENSIEKEAPPPPPPRFQVHSFCKTLTASDTST 170

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 171 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSV 230

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 231 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 290

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y ++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 291 TGTMFTVYYKPRTSPSEFIVPFDQYTESV-KINYSIGMRFKMRFEGEEAPEQRFTGTIVG 349

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I D DP RW+ S WRS+KV WDE+T+  R  RVS W+IEP  +    P+L P+ + RP  
Sbjct: 350 IEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALS---PPALSPVPMPRPKR 406

Query: 379 PSTS 382
           P ++
Sbjct: 407 PRSN 410



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D END
Sbjct: 722 RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFNGELMAP-KKDWLIVYTDDEND 780

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 781 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 810


>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
 gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
          Length = 678

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 379 PSTS 382
           P ++
Sbjct: 412 PRSN 415


>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
          Length = 854

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 257/364 (70%), Gaps = 5/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEVYAQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEPNQDENVIEKETPPPPPPRFQVHSFCKTLTASDTST 175

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I D DP RW+ S WRS+KV WDE+++  R  RVS W+IEP       P+L P+ + RP  
Sbjct: 355 IEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKR 411

Query: 379 PSTS 382
           P ++
Sbjct: 412 PRSN 415



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 727 SRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFEFNGELMAP-KKDWLIVYTDDEN 785

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++ +GDDPW+ F   V  I I + E+V+KM
Sbjct: 786 DMMRVGDDPWQEFCCMVRKIFIYTKEEVRKM 816


>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/373 (52%), Positives = 260/373 (69%), Gaps = 4/373 (1%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           +TSG+ + G       L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D 
Sbjct: 31  TTSGVKRVGDP--EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP 123
            +P Y +LP +++C++ NV + A+ +TDEV+AQ+TL P S +++           P +  
Sbjct: 89  QMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH 147

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
            + FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL A+DLH  EW+FRHIF
Sbjct: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS 
Sbjct: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           SMH+G+LA A HA +T + FTV++ PR SPSEF++P  +Y++++     S+GMRF+M FE
Sbjct: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFE 326

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVS W+IEP    P
Sbjct: 327 GEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSPWKIEPALAPP 386

Query: 364 MYPSLFPLRLKRP 376
              SL   R KRP
Sbjct: 387 ALNSLPMPRPKRP 399



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 31/234 (13%)

Query: 589 PSQVRDFVHSMSL-PSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTT 647
           PS   +  HS  L P S   +D   G       S++  +FG+ + S+ ++    VS   T
Sbjct: 605 PSNFENSAHSRELMPKSAMVQDQEAGK------SKDCKLFGIPLFSNHVMPEPVVSHRNT 658

Query: 648 SVDPG-------------------VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLT 688
             +P                     SS    D+   N      Q S     +V    Q  
Sbjct: 659 MNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCG 718

Query: 689 PTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRE 747
            TR+  KV K G ++GRS+D+S+F++Y+EL  EL Q+F  +G+   P +  W +V+ D E
Sbjct: 719 STRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAP-KKNWLIVYTDDE 777

Query: 748 NDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF---SPSSGQRANSR 798
            D++L+GDDPW+ F   V  I I + E+V KM    + S    SP +G+  +++
Sbjct: 778 GDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAK 831


>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
          Length = 709

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/367 (56%), Positives = 259/367 (70%), Gaps = 14/367 (3%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN--KEVDSH---IPNYPNLPP 73
           CL  ELWHACAGPL+ LP  G  VVYFPQGH EQV A ++  K ++ H   +  Y +LPP
Sbjct: 48  CL--ELWHACAGPLIYLPKKGHTVVYFPQGHLEQVLAASSYFKSLEHHQIRMLTY-DLPP 104

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-LSPEE--QKDTFVPIELG--IPSKQPTNYFC 128
           Q+ C++ +V +HAD E D+VYAQ+TL P L   E   K+     E G  I  K   + FC
Sbjct: 105 QIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFC 164

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+RGQP+
Sbjct: 165 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPR 224

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGWSVFV+ K LV+GD+VLF+  E  +L LGIRRA RPP+ +P SVLSS  +H+ 
Sbjct: 225 RHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLS 284

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           +L+ AA+A +T S F VF++PRASPSEFVIP  KYVK++    +S+GMRF+M  E E+S+
Sbjct: 285 ILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRP-ISIGMRFKMRLEMEDSA 343

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            +R  G ITG  D+DP+RW NS WR + V WD+S+   RQ RVS WEIEP  + P     
Sbjct: 344 EKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALSCP 403

Query: 369 FPLRLKR 375
              R+KR
Sbjct: 404 VAPRIKR 410


>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
 gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
          Length = 672

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/377 (53%), Positives = 265/377 (70%), Gaps = 10/377 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G  GD   L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NL
Sbjct: 11  GSAGD--ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NL 67

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           PP+++C++ NV + A+ ++DEVYAQ+ LQP + E+ + T    E   P +   + FCKTL
Sbjct: 68  PPKILCKVVNVELRAETDSDEVYAQIMLQPEA-EQNEPTSPDAEPPEPERCNVHSFCKTL 126

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 127 TASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHL 186

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA
Sbjct: 187 LTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLA 246

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A+HA +T + F+VF+ PR S SEFV+ + KY++A  H ++SVGMRF+M FE +ES  RR
Sbjct: 247 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KMSVGMRFKMRFEGDESPERR 305

Query: 312 YMGTITGISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
           + GTI G+  + P      W+NS WRS+KV WDE +A  R  RVS WE+EPL      P 
Sbjct: 306 FSGTIIGLGSM-PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWELEPLDATNPQPP 364

Query: 368 LFPLRLKRPWHPSTSSF 384
             PLR KR   P++ S 
Sbjct: 365 QPPLRNKRARPPASPSI 381



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D++R   Y++L  +L +MF I G+    LR  W++V+ D E+
Sbjct: 541 VRSCTKVIMQGMAVGRAVDLTRLDGYDDLHRKLEEMFDIHGELSANLRK-WKVVYTDDED 599

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F   V  I I S E+ + +
Sbjct: 600 DMMLVGDDPWNEFCRMVKRIYIYSYEEAKSL 630


>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 858

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 193/367 (52%), Positives = 259/367 (70%), Gaps = 11/367 (2%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  + H+P Y +LPP+++C+
Sbjct: 53  ALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVY-DLPPKILCR 111

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP---TNYFCKTLTASD 135
           + NV + A+ +TDEV+AQ+TL P   E  +D     + G P+  P    + FCKTLTASD
Sbjct: 112 VINVMLKAEPDTDEVFAQVTLLP---EPNQDENAVEKEGPPAAPPRFHVHSFCKTLTASD 168

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSV RR A++  P LD + QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +G
Sbjct: 169 TSTHGGFSVLRRHADECLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSG 228

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A H
Sbjct: 229 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 288

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           A  T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R+ GT
Sbjct: 289 AILTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGT 347

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           I GI D D  RW  S WRS+KV WDE++   R  RVS W+IEP       P+L PL + R
Sbjct: 348 IVGIEDADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALA---PPALNPLPMPR 404

Query: 376 PWHPSTS 382
           P  P ++
Sbjct: 405 PKRPRSN 411



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 2/111 (1%)

Query: 670 CMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIE 728
            +Q S   L ++         R+  KV+K G ++GRS+D+++FS Y EL  EL Q+F   
Sbjct: 713 VLQTSQTHLKDIQAKSHSGSARSCTKVHKKGIALGRSVDLTKFSDYGELIAELDQLFEFG 772

Query: 729 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           G    P +  W +V+ D E D++L+GDDPW+ FV+ V  I I   E++QKM
Sbjct: 773 GLLTSPQKD-WLIVYTDNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKM 822


>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
 gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
          Length = 661

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/343 (54%), Positives = 252/343 (73%), Gaps = 6/343 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+T++++D ++P + NLPP+++C +
Sbjct: 24  LYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTHQQLDQYLPMF-NLPPKILCSV 82

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            NV + A+ ++DEVYAQ+ LQP + + +  +  P E   P K   + FCKTLTASDTSTH
Sbjct: 83  VNVELRAEADSDEVYAQIMLQPEADQNELTSLDP-EPQEPEKCTAHSFCKTLTASDTSTH 141

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR AE+  P LD SL PP QEL+A+DLH  EW FRHIFRGQPKRHLLTTGWSVF
Sbjct: 142 GGFSVLRRHAEECLPQLDMSLNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSVF 201

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 202 VSSKRLVAGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAIST 261

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F+VF+ PR S S+F++ + KY++A    ++SVGMRF+M FE +E+  RR+ GTI GI
Sbjct: 262 GTLFSVFYKPRTSRSDFIVSVNKYLEAK-KQKISVGMRFKMRFEGDEAPERRFSGTIIGI 320

Query: 320 SDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
             L  +    W++S WRS+KV WDE ++  R  R+S WE+EPL
Sbjct: 321 GSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPL 363



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D+++ S Y++L ++L +MF I G+    L+  W+++F D E+
Sbjct: 549 VRSCTKVIMQGMAVGRAVDLTKLSGYSDLCQKLEEMFDIHGELGCTLKK-WRVIFTDDED 607

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+ +K+
Sbjct: 608 DMMLVGDDPWDEFCRMVKRIYIYTYEEAKKL 638


>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
 gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
          Length = 654

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/359 (54%), Positives = 255/359 (71%), Gaps = 3/359 (0%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+T++ VD H+P++ NLP +++
Sbjct: 20  NNALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGVDQHLPSF-NLPAKIL 78

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P K   + FCKTLTASDT
Sbjct: 79  CKVMNVQLRAESETDEVYAQITLLP-EPDQGEITSPDPPLPEPEKCTVHSFCKTLTASDT 137

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD S QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 138 STHGGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHFRHIFRGQPRRHLLTTGW 197

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVSAK+LVAGD+ +F+  +  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA
Sbjct: 198 SVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHA 257

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE   RR+ GTI
Sbjct: 258 IMTGTLFSVFYKPRTSQSEFIVSVNKYLEARNH-KLSVGMRFKMRFEGEEVPERRFSGTI 316

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
            G+ D    RW +S WRS+KV WDE ++  R  RVS W++EPL       +  P R KR
Sbjct: 317 VGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLVAATPTNTQPPQRNKR 375



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++R  SY +L ++L  MF IEG+     +  WQ+V+ D E+D
Sbjct: 540 RSCTKVHMQGKAVGRAVDLTRLDSYEDLLKKLEVMFEIEGELRGSTKK-WQVVYTDDEDD 598

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I + + E+ +K+
Sbjct: 599 MMMVGDDPWHGFCSMVRKIYVYTAEEAKKL 628


>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 858

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 256/364 (70%), Gaps = 5/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 53  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 111

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEVYAQ+TL P + +++           P +   + FCKTLTASDTST
Sbjct: 112 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTST 171

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 172 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 231

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 232 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 291

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 292 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 350

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I D D  RW  S WRS+KV WDE+++  R  RVS W+IEP       P+L P+ + RP  
Sbjct: 351 IEDSDITRWPKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKR 407

Query: 379 PSTS 382
           P ++
Sbjct: 408 PRSN 411



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFEFNGELMAP-KKDWLIVYTDDEN 790

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
 gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
 gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
          Length = 808

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/361 (54%), Positives = 258/361 (71%), Gaps = 10/361 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  DS +  Y +LP +L+C++
Sbjct: 21  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRV 79

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELGIPSKQPTNYFCKTLTASDT 136
            NV + A+ +TDEVYAQ+ L P  PE+ +   +   P    + ++ P   FCKTLTASDT
Sbjct: 80  LNVELKAEQDTDEVYAQVMLMP-EPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDT 138

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +GW
Sbjct: 139 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGW 198

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA
Sbjct: 199 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHA 258

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T S FTV++ PR SPSEF+IP  +Y+++V     SVGMRFRM FE EE+  +R+ GTI
Sbjct: 259 INTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSVGMRFRMRFEGEEAPEQRFTGTI 317

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKR 375
            G  +LDPV W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+KR
Sbjct: 318 IGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRVKR 374

Query: 376 P 376
           P
Sbjct: 375 P 375



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 71/104 (68%), Gaps = 2/104 (1%)

Query: 680 NVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 738
           +V    Q+  TR+  KV+K G ++GRS+D+S+FS+Y+EL+ EL +MF  +G+     ++ 
Sbjct: 681 DVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKN- 739

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 740 WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSK 783


>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/373 (51%), Positives = 261/373 (69%), Gaps = 5/373 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  D H+P Y +LPP+++C+
Sbjct: 35  ALFRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVY-DLPPKILCR 93

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 94  VINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 153

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+F+HIFRGQP+RHLL +GWSV
Sbjct: 154 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSV 213

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 214 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 273

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SP+EF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 274 TGTIFTVYYKPRTSPAEFIVPYDQYMESL-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 332

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I D DP RW +S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 333 IEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALA---PPALNPLSMPRPKR 389

Query: 379 PSTSSFNDNRDET 391
           P +++   + D +
Sbjct: 390 PRSNAVPSSPDSS 402



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV+K G ++GRS+D++++S Y+EL  EL Q+F   G+     +  W +VF D E 
Sbjct: 712 ARSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFEFGGELLS-TKKDWLIVFTDNEG 770

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F + V  I I   E++QKM
Sbjct: 771 DMMLVGDDPWQEFCAMVRKIYIYPKEEIQKM 801


>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
          Length = 672

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 193/366 (52%), Positives = 260/366 (71%), Gaps = 3/366 (0%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+T++++D H+P + NLP +++C+
Sbjct: 16  ALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCK 74

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ ++DEVYAQ+ LQP + + +  +  P E   P K   + FCKTLTASDTST
Sbjct: 75  VVNVELRAETDSDEVYAQIMLQPETDQSEPSSADP-EPHEPEKCNAHSFCKTLTASDTST 133

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 134 HGGFSVLRRHAEECLPPLDMTQNPPWQELVAKDLHANEWHFRHIFRGQPRRHLLTTGWSV 193

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  +   L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 194 FVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 253

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F+VF+ PR S SEFV+ + KY++A  + ++SVGMRF+M FE +E+  RR+ GTI G
Sbjct: 254 TGTLFSVFYKPRTSRSEFVVSVNKYLEAK-NNKMSVGMRFKMRFEGDEAPERRFSGTIIG 312

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           +  +    W++S WRS+KV WDE +A  R  RVS WE+EPL    + P   P R KR   
Sbjct: 313 VGSMTTSPWADSDWRSLKVQWDEPSAIPRPDRVSPWELEPLVATSIQPPQPPARNKRARP 372

Query: 379 PSTSSF 384
           P++ S 
Sbjct: 373 PASPSI 378



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 7/107 (6%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D++R   Y +L ++L +MF I+G+    L+  W+LV+ D E+
Sbjct: 540 VRSCTKVIMEGMAVGRAVDLTRLHGYEDLHQKLEEMFDIQGELSASLKK-WKLVYTDDED 598

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG-----VESFSPS 790
           D++L+GDDPW  F S V  + I S E+ + +  +      V++  PS
Sbjct: 599 DMMLVGDDPWSEFCSMVKKVYIYSYEEAKHLTPKAKLPVVVDAIKPS 645


>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
          Length = 791

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/361 (54%), Positives = 258/361 (71%), Gaps = 10/361 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  DS +  Y +LP +L+C++
Sbjct: 4   LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRV 62

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELGIPSKQPTNYFCKTLTASDT 136
            NV + A+ +TDEVYAQ+ L P  PE+ +   +   P    + ++ P   FCKTLTASDT
Sbjct: 63  LNVELKAEQDTDEVYAQVMLMP-EPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDT 121

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +GW
Sbjct: 122 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGW 181

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA
Sbjct: 182 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHA 241

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T S FTV++ PR SPSEF+IP  +Y+++V     SVGMRFRM FE EE+  +R+ GTI
Sbjct: 242 INTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSVGMRFRMRFEGEEAPEQRFTGTI 300

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKR 375
            G  +LDPV W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+KR
Sbjct: 301 IGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRVKR 357

Query: 376 P 376
           P
Sbjct: 358 P 358



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 71/104 (68%), Gaps = 2/104 (1%)

Query: 680 NVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 738
           +V    Q+  TR+  KV+K G ++GRS+D+S+FS+Y+EL+ EL +MF  +G+     ++ 
Sbjct: 664 DVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKN- 722

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 723 WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSK 766


>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
          Length = 803

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/361 (54%), Positives = 258/361 (71%), Gaps = 10/361 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  DS +  Y +LP +L+C++
Sbjct: 16  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRV 74

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELGIPSKQPTNYFCKTLTASDT 136
            NV + A+ +TDEVYAQ+ L P  PE+ +   +   P    + ++ P   FCKTLTASDT
Sbjct: 75  LNVELKAEQDTDEVYAQVMLMP-EPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDT 133

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +GW
Sbjct: 134 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGW 193

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA
Sbjct: 194 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHA 253

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T S FTV++ PR SPSEF+IP  +Y+++V     SVGMRFRM FE EE+  +R+ GTI
Sbjct: 254 INTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSVGMRFRMRFEGEEAPEQRFTGTI 312

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKR 375
            G  +LDPV W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+KR
Sbjct: 313 IGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRVKR 369

Query: 376 P 376
           P
Sbjct: 370 P 370



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 71/104 (68%), Gaps = 2/104 (1%)

Query: 680 NVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 738
           +V    Q+  TR+  KV+K G ++GRS+D+S+FS+Y+EL+ EL +MF  +G+     ++ 
Sbjct: 676 DVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKN- 734

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 735 WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSK 778


>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/373 (50%), Positives = 262/373 (70%), Gaps = 5/373 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  D H+P Y +LPP+++C+
Sbjct: 35  ALFRELWHACAGPLVTVPREKERVFYFPQGHIEQVEASTNQVADQHMPVY-DLPPKILCR 93

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 94  VINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 153

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+F+HIFRGQP+RHLL +GWSV
Sbjct: 154 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSV 213

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  
Sbjct: 214 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIL 273

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SP+EF++P  +Y++++ ++  S+GMRF+M FE EE+  +R+ GT+ G
Sbjct: 274 TGTIFTVYYKPRTSPAEFIVPYDQYMESLKNS-YSIGMRFKMRFEGEEAPEQRFTGTVVG 332

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I D DP RW +S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 333 IEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALA---PPALNPLSMPRPKR 389

Query: 379 PSTSSFNDNRDET 391
           P +++   + D +
Sbjct: 390 PRSNAVPSSPDSS 402



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV+K G ++GRS+D++++S Y+EL  EL Q+F   G+     +  W +V+ D E 
Sbjct: 712 ARSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFEFGGELLS-TKKDWLIVYTDNEG 770

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F + V  I I   E++QKM
Sbjct: 771 DMMLVGDDPWQEFCAMVCKIYIYPKEEIQKM 801


>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
 gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
          Length = 669

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/381 (52%), Positives = 262/381 (68%), Gaps = 13/381 (3%)

Query: 6   SGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHI 65
           SG C          L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+++D ++
Sbjct: 10  SGTCSDA-------LFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYL 62

Query: 66  PNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN 125
           P + NLP +++C + NV + A+ ++DEVYAQ+ LQP + + +  +  P EL    K   +
Sbjct: 63  PMF-NLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDP-ELQDLEKCTAH 120

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRG
Sbjct: 121 SFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRG 180

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLLTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SM
Sbjct: 181 QPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSM 240

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           H+G+LA A+HA +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +
Sbjct: 241 HLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAK-KQNLSVGMRFKMRFEGD 299

Query: 306 ESSVRRYMGTITGISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           E+  RR+ GTI GI  +  +    W++S W+S+KV WDE +A  R  RVS WE+EPL   
Sbjct: 300 EAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS 359

Query: 363 PMYPSLFPLRLKRPWHPSTSS 383
              P   PLR KR   P++ S
Sbjct: 360 NPQPPQPPLRNKRARPPASPS 380



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D+++ + Y +LR +L +MF I+G     L+  WQ+V+ D E+
Sbjct: 542 VRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKR-WQVVYTDDED 600

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           D++L+GDDPW+ F S V  I I S E+ + + 
Sbjct: 601 DMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLA 632


>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
 gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
 gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
          Length = 673

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/381 (52%), Positives = 262/381 (68%), Gaps = 13/381 (3%)

Query: 6   SGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHI 65
           SG C          L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+++D ++
Sbjct: 14  SGTCSDA-------LFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYL 66

Query: 66  PNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN 125
           P + NLP +++C + NV + A+ ++DEVYAQ+ LQP + + +  +  P EL    K   +
Sbjct: 67  PMF-NLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDP-ELQDLEKCTAH 124

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRG
Sbjct: 125 SFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRG 184

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLLTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SM
Sbjct: 185 QPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSM 244

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           H+G+LA A+HA +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +
Sbjct: 245 HLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAK-KQNLSVGMRFKMRFEGD 303

Query: 306 ESSVRRYMGTITGISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           E+  RR+ GTI GI  +  +    W++S W+S+KV WDE +A  R  RVS WE+EPL   
Sbjct: 304 EAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS 363

Query: 363 PMYPSLFPLRLKRPWHPSTSS 383
              P   PLR KR   P++ S
Sbjct: 364 NPQPPQPPLRNKRARPPASPS 384



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D+++ + Y +LR +L +MF I+G     L+  WQ+V+ D E+
Sbjct: 546 VRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKR-WQVVYTDDED 604

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           D++L+GDDPW+ F S V  I I S E+ + + 
Sbjct: 605 DMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLA 636


>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
 gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 257/364 (70%), Gaps = 5/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L +ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  D  +P Y +LP +++C+
Sbjct: 56  ALYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVY-DLPSKILCR 114

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 115 VINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTST 174

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 175 HGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 234

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 235 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKS 294

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SP+EF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 295 TGTMFTVYYKPRTSPAEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 353

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I D DP RW +S WR +KV WDE++   R  RVS W+IEP  T    P+L PL + RP  
Sbjct: 354 IEDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAVT---PPALNPLPVPRPKR 410

Query: 379 PSTS 382
           P ++
Sbjct: 411 PRSN 414



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 672 QDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGK 730
           Q S  L  +V    Q   TR+  KV+K G ++GRS+D+++F++Y+EL  EL Q+F   G+
Sbjct: 717 QTSLPLSRDVQGKVQSVSTRSCTKVHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGE 776

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
              P +  W +V+ D E D++L+GDDPW+ F   V  I I + E+VQ+M
Sbjct: 777 LMAP-KKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIYIYTREEVQRM 824


>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
          Length = 678

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/366 (53%), Positives = 260/366 (71%), Gaps = 4/366 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NLP +++C++
Sbjct: 23  LYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCKV 81

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            NV + A+ ++DEVYAQ+ LQP + + +  +  P E   P K   + FCKTLTASDTSTH
Sbjct: 82  VNVELRAETDSDEVYAQIMLQPEADQNELTSPKP-EPHEPEKCNVHSFCKTLTASDTSTH 140

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR AE+  P LD +  PP QEL+ARDLH  EW FRHIFRGQP+RHLLTTGWSVF
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F+VF+ PR S SEFV+   KY++A  ++++SVGMRF+M FE +E+  RR+ GTI G+
Sbjct: 261 GTLFSVFYKPRTSQSEFVVSANKYLEAK-NSKISVGMRFKMRFEGDEAPERRFSGTIIGV 319

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-LFPLRLKRPWH 378
             +    W+NS WRS+KV WDE +   R  RVS WE+EPL      PS   P R KR   
Sbjct: 320 GSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARP 379

Query: 379 PSTSSF 384
           P++SS 
Sbjct: 380 PASSSI 385



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D++R   Y++LR +L +MF I+G+    L+  W++V+ D E+
Sbjct: 547 VRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKK-WKVVYTDDED 605

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F S V  I I + E+ +++
Sbjct: 606 DMMLVGDDPWPEFCSMVKRIYIYTYEEAKQL 636


>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
          Length = 1673

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/375 (52%), Positives = 261/375 (69%), Gaps = 9/375 (2%)

Query: 15  GDNKC---LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G   C   L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+++D ++P + NL
Sbjct: 9   GSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMF-NL 67

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           P +++C + NV + A+ ++DEVYAQ+ LQP + + +  +  P EL    K   + FCKTL
Sbjct: 68  PSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDP-ELQDLEKCTAHSFCKTL 126

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 127 TASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHL 186

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA
Sbjct: 187 LTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLA 246

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A+HA +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +E+  RR
Sbjct: 247 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAK-KQNLSVGMRFKMRFEGDEAPERR 305

Query: 312 YMGTITGISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
           + GTI GI  +  +    W++S W+S+KV WDE +A  R  RVS WE+EPL      P  
Sbjct: 306 FSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQ 365

Query: 369 FPLRLKRPWHPSTSS 383
            PLR KR   P++ S
Sbjct: 366 PPLRNKRARPPASPS 380



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D+++ + Y +LR +L +MF I+G     L+  WQ+V+ D E+
Sbjct: 424 VRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKR-WQVVYTDDED 482

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           D++L+GDDPWE F    ++I     ED 
Sbjct: 483 DMMLVGDDPWEKF--QCFFITASCAEDA 508


>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
          Length = 946

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/363 (52%), Positives = 257/363 (70%), Gaps = 5/363 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  D  +P Y +LP +++C++
Sbjct: 57  LYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVY-DLPSKILCRV 115

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTSTH
Sbjct: 116 INVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTH 175

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSVF
Sbjct: 176 GGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 235

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +T
Sbjct: 236 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKST 295

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + FTV++ PR SP+EF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 296 GTMFTVYYKPRTSPAEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 354

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHP 379
            D DP RW +S WR +KV WDE++   R  RVS W+IEP  T    P+L PL + RP  P
Sbjct: 355 EDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAVT---PPALNPLPVPRPKRP 411

Query: 380 STS 382
            ++
Sbjct: 412 RSN 414



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 58/85 (68%), Gaps = 2/85 (2%)

Query: 696 VYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 754
           V+K G ++GRS+D+++F++Y+EL  EL Q+F   G+   P +  W +V+ D E D++L+G
Sbjct: 786 VHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAP-KKNWLIVYTDDEGDMMLVG 844

Query: 755 DDPWEAFVSNVWYIKILSPEDVQKM 779
           DDPW+ F   V  I I + E+VQ+M
Sbjct: 845 DDPWQEFCGMVRKIYIYTREEVQRM 869


>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
          Length = 684

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/362 (54%), Positives = 258/362 (71%), Gaps = 5/362 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+  D  +P + +LP +++C++
Sbjct: 22  LYQELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTNQGADQQMPLF-SLPAKILCRV 80

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            +V + A+ ETDEVYAQ+TL P  PE+ + T     +  P +   + FCKTLTASDTSTH
Sbjct: 81  VHVQLRAEPETDEVYAQITLLP-EPEQGEITSPDPPIPEPPRCTVHSFCKTLTASDTSTH 139

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR A++  P LD S  PP QEL+A DLH  EW FRHIFRGQP+RHLLTTGWSVF
Sbjct: 140 GGFSVLRRHADECLPQLDMSQHPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 199

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+KRLVAGD+ +F+  E  +L +G+RR +R P+ MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQPSNMPSSVISSHSMHLGVLATASHAIST 259

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F+VF+ PR S SEF+I L KY++A  H ++SVGMRF+M FE E++  RR+ GTI G+
Sbjct: 260 GTLFSVFYKPRTSQSEFIISLNKYLEAKNH-KLSVGMRFKMRFEGEDAPERRFSGTIIGV 318

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL-TTFPMYPSLFPLRLKRPWH 378
            D    RW++S WRS+KV WDE ++  R  RVS WE+EPL    P  P   P R KR   
Sbjct: 319 GDAVSSRWADSEWRSLKVQWDEPSSIPRPVRVSPWELEPLVAAVPSAPQPTP-RSKRARP 377

Query: 379 PS 380
           P+
Sbjct: 378 PA 379



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+  G +VGR++D+SR   Y +L  +L QMF IEG+   P +  WQLV+ D E+
Sbjct: 555 TRSCTKVHLQGMAVGRAVDLSRLDCYEDLLNKLEQMFNIEGELSGPTKK-WQLVYTDDED 613

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D +L+GDDPW  F   V  I I +PE+V+ +
Sbjct: 614 DTMLVGDDPWHEFCGIVRKINIYTPEEVKNL 644


>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
 gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
 gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
           Group]
 gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
 gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
          Length = 678

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/366 (53%), Positives = 260/366 (71%), Gaps = 4/366 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NLP +++C++
Sbjct: 23  LYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCKV 81

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            NV + A+ ++DEVYAQ+ LQP + + +  +  P E   P K   + FCKTLTASDTSTH
Sbjct: 82  VNVELRAETDSDEVYAQIMLQPEADQNELTSPKP-EPHEPEKCNVHSFCKTLTASDTSTH 140

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR AE+  P LD +  PP QEL+ARDLH  EW FRHIFRGQP+RHLLTTGWSVF
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F+VF+ PR S SEFV+   KY++A  ++++SVGMRF+M FE +E+  RR+ GTI G+
Sbjct: 261 GTLFSVFYKPRTSQSEFVVSANKYLEAK-NSKISVGMRFKMRFEGDEAPERRFSGTIIGV 319

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-LFPLRLKRPWH 378
             +    W+NS WRS+KV WDE +   R  RVS WE+EPL      PS   P R KR   
Sbjct: 320 GSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARP 379

Query: 379 PSTSSF 384
           P+++S 
Sbjct: 380 PASNSI 385



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D++R   Y++LR +L +MF I+G+    L+  W++V+ D E+
Sbjct: 547 VRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKK-WKVVYTDDED 605

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F S V  I I + E+ +++
Sbjct: 606 DMMLVGDDPWPEFCSMVKRIYIYTYEEAKQL 636


>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
          Length = 769

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/382 (51%), Positives = 267/382 (69%), Gaps = 10/382 (2%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P VG RV YFPQGH EQV A+TN+  D  +P Y +L  +++C+
Sbjct: 9   ALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAY-DLRAKILCR 67

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 137
           + NV + A+ +TDEV+AQ+TL P  P++ +++    ++  P+ +P  + FCKTLTASDTS
Sbjct: 68  VINVHLKAESDTDEVFAQVTLLP-EPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTS 126

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWS
Sbjct: 127 THGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 186

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FVS+K+LVAGD+ +F+  E  +L +G+RRA+R  +  PSSV+SS SMH+G+LA A HA 
Sbjct: 187 LFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAV 246

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           +T + FTV++ PR SP+EF+IP  +Y++AV     S+GMRF+M FE EE+  +R+ GT+ 
Sbjct: 247 STGTIFTVYYKPRTSPAEFIIPFDQYMEAV-KNHYSIGMRFKMKFEGEEAPEQRFTGTVI 305

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL---RLK 374
           G  D DP+RW  S WR +KV WDE+++  R   VS W IE   T    PSL PL   R K
Sbjct: 306 GTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALT---PPSLNPLPVSRSK 362

Query: 375 RPWHPSTSSFNDNRDETASGLN 396
           RP     SS  ++   T  GL+
Sbjct: 363 RPRANMMSSSTESSVLTREGLS 384



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+ +KV+K G +VGRS+D+++F+ Y EL  EL Q+F   G+    L   W +VF D E 
Sbjct: 637 TRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELIS-LNKDWLIVFTDDEG 695

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F S V  I + + E++Q+M
Sbjct: 696 DMMLVGDDPWPEFCSMVRKIFVYTREEIQRM 726


>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
 gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/362 (54%), Positives = 254/362 (70%), Gaps = 3/362 (0%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ ++ ++  +P++ NLP +
Sbjct: 13  GCNDALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGMEQQMPSF-NLPSK 71

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           ++C++ NV   A+ ETDEVYAQ+TL P  P++ + T     L  P +   + FCKTLTAS
Sbjct: 72  ILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDPPLPEPERCTVHSFCKTLTAS 130

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV RR A+   P LD S QPP QEL+A DLH  EW FRHIFRGQP+RHLLTT
Sbjct: 131 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 190

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T MPSSV+SS SMH+G+LA A+
Sbjct: 191 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATAS 250

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA AT + F+VF+ PR S SEF++ L KY++A  H ++SVGMRF+M FE EE   RR+ G
Sbjct: 251 HAIATGTLFSVFYKPRTSRSEFIVNLNKYIEAQNH-KLSVGMRFKMRFEGEEVPERRFSG 309

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TI G+ D     W++S WRS+KV WDE ++  R  RVS W++EPL       S    R K
Sbjct: 310 TIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVATTPSNSQPMQRNK 369

Query: 375 RP 376
           RP
Sbjct: 370 RP 371



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D+++F  Y +L  +L +MF IEG+     +  WQ+V+ D E+D
Sbjct: 534 RSCTKVHMQGVAVGRAVDLTQFERYEDLLRKLEEMFDIEGELSGSTKK-WQVVYTDNEDD 592

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++ +GDDPW  F S V  I I + E+V+++
Sbjct: 593 MMKVGDDPWHEFCSMVKKIFIYASEEVKRL 622


>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 851

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/366 (52%), Positives = 259/366 (70%), Gaps = 11/366 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  + H+P Y +LPP+++C++
Sbjct: 48  LYRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVAEQHMPVY-DLPPKILCRV 106

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP---TNYFCKTLTASDT 136
            NV + A+ +TDEV+AQ+TL P   E  +D     + G P+  P    + FCKTLTASDT
Sbjct: 107 INVMLKAEPDTDEVFAQVTLLP---EPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDT 163

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GW
Sbjct: 164 STHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGW 223

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA
Sbjct: 224 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 283

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R+ GTI
Sbjct: 284 ILTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGTI 342

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            GI D D  RW  S WRS+KV WDE++   R  RVS W+IEP    P+  +L PL + RP
Sbjct: 343 VGIEDADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALA-PL--ALNPLPMPRP 399

Query: 377 WHPSTS 382
             P ++
Sbjct: 400 KRPRSN 405



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 2/111 (1%)

Query: 670 CMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIE 728
            +Q S   L +V         R+  KV+K G ++GRS+D+++FS Y EL  EL Q+F   
Sbjct: 706 VLQTSQPHLKDVQAKSHSGSARSCTKVHKKGIALGRSVDLTKFSDYGELITELDQLFEFG 765

Query: 729 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           G+   P +  W +V+ D E D++L+GDDPW+ FV+ V  I I   E++QKM
Sbjct: 766 GELTSPQKD-WLIVYTDNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKM 815


>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
 gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/339 (54%), Positives = 245/339 (72%), Gaps = 2/339 (0%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y NL P+++C+
Sbjct: 51  ALYNELWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQQMPLY-NLLPKILCR 109

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 110 VVNVQLKAEPDTDEVFAQVTLLPEHNQDESVLEKEPPPPPPPRFHVHSFCKTLTASDTST 169

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 170 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 229

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 230 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 289

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SP+EF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 290 TGTLFTVYYKPRTSPAEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 348

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           I D DP RW NS WR +KV WDE++   R  RVS W+IE
Sbjct: 349 IEDADPGRWKNSKWRCLKVRWDETSTMPRPERVSPWKIE 387



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 69/103 (66%), Gaps = 7/103 (6%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+++F++Y+EL  EL ++F   G+   P ++ W +V+ D E+
Sbjct: 724 TRSCTKVHKQGIALGRSVDLAKFNNYDELIAELDRLFEFNGELMAPQKN-WLIVYTDDED 782

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQK-----MGEQGVES 786
           D++L+GDDPW+ FV  V  I I + E+ QK     +  +GVE+
Sbjct: 783 DMMLVGDDPWQEFVGMVRKIVIYTKEEAQKIKPGALNSKGVEN 825


>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
          Length = 660

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/381 (51%), Positives = 261/381 (68%), Gaps = 13/381 (3%)

Query: 6   SGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHI 65
           SG C          L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+++D ++
Sbjct: 10  SGTCSDA-------LFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYL 62

Query: 66  PNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN 125
           P + NLP +++C + NV + A+ ++DEVYAQ+ LQP + + +  +  P EL    K   +
Sbjct: 63  PMF-NLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDP-ELQDLEKCTAH 120

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRG
Sbjct: 121 SFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRG 180

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLLTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SM
Sbjct: 181 QPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSM 240

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           H+G+LA A+HA +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +
Sbjct: 241 HLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAK-KQNLSVGMRFKMRFEGD 299

Query: 306 ESSVRRYMGTITGISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           E+  RR+ GTI GI  +  +    W++S W+S+KV WDE +A     RVS WE+EPL   
Sbjct: 300 EAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVCPDRVSPWELEPLDAS 359

Query: 363 PMYPSLFPLRLKRPWHPSTSS 383
              P   PLR KR   P++ S
Sbjct: 360 NPQPPQPPLRNKRARPPASPS 380



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 2/87 (2%)

Query: 695 KVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 753
           KV   G +VGR++D+++ + Y +LR +L +MF I+G     L+  WQ+V+ D E+D++L+
Sbjct: 538 KVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKR-WQVVYTDDEDDMMLV 596

Query: 754 GDDPWEAFVSNVWYIKILSPEDVQKMG 780
           GDDPW+ F S V  I I S E+ + + 
Sbjct: 597 GDDPWDEFCSMVKRIYIYSYEEAKLLA 623


>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/382 (51%), Positives = 267/382 (69%), Gaps = 10/382 (2%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P VG RV YFPQGH EQV A+TN+  D  +P Y +L  +++C+
Sbjct: 9   ALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAY-DLRAKILCR 67

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 137
           + NV + A+ +TDEV+AQ+TL P  P++ +++    ++  P+ +P  + FCKTLTASDTS
Sbjct: 68  VINVHLKAESDTDEVFAQVTLLP-EPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTS 126

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWS
Sbjct: 127 THGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 186

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FVS+K+LVAGD+ +F+  E  +L +G+RRA+R  +  PSSV+SS SMH+G+LA A HA 
Sbjct: 187 LFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAV 246

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           +T + FTV++ PR SP+EF+IP  +Y++AV     S+GMRF+M FE EE+  +R+ GT+ 
Sbjct: 247 STGTIFTVYYKPRTSPAEFIIPFDQYMEAV-KNHYSIGMRFKMKFEGEEAPEQRFTGTVI 305

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL---RLK 374
           G  D DP+RW  S WR +KV WDE+++  R   VS W IE   T    PSL PL   R K
Sbjct: 306 GTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALT---PPSLNPLPVSRSK 362

Query: 375 RPWHPSTSSFNDNRDETASGLN 396
           RP     SS  ++   T  GL+
Sbjct: 363 RPRANMMSSSTESSVLTREGLS 384



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+ +KV+K G +VGRS+D+++F+ Y EL  EL Q+F   G+    L   W +VF D E 
Sbjct: 637 TRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELIS-LNKDWLIVFTDDEG 695

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F S V  I + + E++Q+M
Sbjct: 696 DMMLVGDDPWPEFCSMVRKIFVYTREEIQRM 726


>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
          Length = 840

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/374 (50%), Positives = 261/374 (69%), Gaps = 5/374 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L +ELW+ACAGPLVS+P    RV YFPQGH EQV A+T++  D  +P Y NLP +++C+
Sbjct: 40  ALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVY-NLPSKILCR 98

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ ETDEV+AQ+TL P + +++           P +   + FCKTLTASDTST
Sbjct: 99  VINVHLKAEPETDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTST 158

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 159 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 218

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 219 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAIS 278

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y++++  +  ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 279 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKKS-YTIGMRFKMRFEGEEAPEQRFTGTIIG 337

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
             D DP RW +S WR +KV WDE++   R  +VS W+IEP       P+L PL + RP  
Sbjct: 338 CEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALA---PPALNPLPMTRPKR 394

Query: 379 PSTSSFNDNRDETA 392
           P ++  + + D + 
Sbjct: 395 PRSNMVSTSPDSSV 408



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q T  R+  KV+K G ++GRS+D+SRF++Y+EL  EL Q+F   G+   P +  W +V+ 
Sbjct: 710 QGTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELLAP-KKNWLIVYT 768

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D E D++L+GDDPW  F   V  I I + E+VQKM
Sbjct: 769 DDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKM 803


>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 805

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/362 (53%), Positives = 254/362 (70%), Gaps = 12/362 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LPP+L+C++
Sbjct: 21  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRV 79

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--GIPSKQP---TNYFCKTLTAS 134
            NV + A+ +TDEVYAQ+ L P    E + T VP E     P+  P      FCKTLTAS
Sbjct: 80  LNVELKAETDTDEVYAQIMLMP----EPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTAS 135

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +
Sbjct: 136 DTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQS 195

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A 
Sbjct: 196 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAW 255

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ G
Sbjct: 256 HAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTG 314

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TI G  +LDP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P+ P +   R K
Sbjct: 315 TIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAK 373

Query: 375 RP 376
           RP
Sbjct: 374 RP 375



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 8/136 (5%)

Query: 653 VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRF 711
           +  +P G      +    +Q + +   ++    Q   TR+  KV+K G ++GRS+D+S+F
Sbjct: 652 IECLPEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKF 711

Query: 712 SSYNELREELGQMFGIEGKFEDPLRSG---WQLVFVDRENDVLLLGDDPWEAFVSNVWYI 768
           + Y EL+ EL +MF  EG+    L SG   WQ+V+ D E D++L+GDDPWE F S V  I
Sbjct: 712 TDYGELQAELDKMFDFEGE----LVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKI 767

Query: 769 KILSPEDVQKMGEQGV 784
            I + E+VQKM  +  
Sbjct: 768 YIYTKEEVQKMNSKSA 783


>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
          Length = 643

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/367 (53%), Positives = 256/367 (69%), Gaps = 3/367 (0%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV++P    RV YFPQGH EQ+ A+ ++ +D  +P++ NLP +++
Sbjct: 17  NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPSKIL 75

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P     + FCKTLTASDT
Sbjct: 76  CKVVNVHLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDT 134

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 135 STHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 194

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRL AGD+ +F+  E  +L +G+RR +R    +P SV+SS SMH+G+LA A+HA
Sbjct: 195 SVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHA 254

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T + F+VF+ PRASPSEF++ + KY++A  H +VSVGMRF+M FE +E+  RR+ GTI
Sbjct: 255 ITTGTLFSVFYKPRASPSEFIVSVNKYLEARNH-KVSVGMRFKMRFEGDEAPERRFSGTI 313

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL T     +    R KRP
Sbjct: 314 VGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQPMQRSKRP 373

Query: 377 WHPSTSS 383
             P  SS
Sbjct: 374 RSPVLSS 380



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D+++FSSY EL  +L +MF I+G+   P +  WQ+V+ D E+D
Sbjct: 519 RSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKK-WQVVYTDDEDD 577

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 578 MMMVGDDPWHEFCSMVRKIFIYTVEEVKEL 607


>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
 gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
          Length = 853

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/363 (53%), Positives = 256/363 (70%), Gaps = 11/363 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C++
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 96

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTLT 132
            NV + A+ +TDEVYAQ+TL P S +++ +     E  +PS     +       FCKTLT
Sbjct: 97  MNVELKAEPDTDEVYAQLTLLPESKQQEDNGST--EEEVPSAPAAGHVRPRVHSFCKTLT 154

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL
Sbjct: 155 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLL 214

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
            +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA 
Sbjct: 215 QSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLAT 274

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+
Sbjct: 275 AWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KQNYSIGMRFKMRFEGEEAPEQRF 333

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
            GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   R
Sbjct: 334 TGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPR 393

Query: 373 LKR 375
            KR
Sbjct: 394 TKR 396



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 674 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 732
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 708 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 767

Query: 733 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 768 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 826

Query: 793 QRANSRGNCGRDPVGSL 809
             +  RG+ GR+  G L
Sbjct: 827 ANSMERGSVGREMRGCL 843


>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
 gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
          Length = 852

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/363 (53%), Positives = 256/363 (70%), Gaps = 11/363 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C++
Sbjct: 37  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 95

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTLT 132
            NV + A+ +TDEVYAQ+TL P S +++ +     E  +PS     +       FCKTLT
Sbjct: 96  MNVELKAEPDTDEVYAQLTLLPESKQQEDNGST--EEEVPSAPAAGHVRPRVHSFCKTLT 153

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL
Sbjct: 154 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLL 213

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
            +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA 
Sbjct: 214 QSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLAT 273

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+
Sbjct: 274 AWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KQNYSIGMRFKMRFEGEEAPEQRF 332

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
            GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   R
Sbjct: 333 TGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPR 392

Query: 373 LKR 375
            KR
Sbjct: 393 TKR 395



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 674 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 732
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 707 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 766

Query: 733 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 767 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 825

Query: 793 QRANSRGNCGRDPVGSL 809
             +  RG+ GR+  G L
Sbjct: 826 ANSMERGSVGREMRGCL 842


>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
          Length = 799

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/362 (53%), Positives = 254/362 (70%), Gaps = 12/362 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LPP+L+C++
Sbjct: 15  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRV 73

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--GIPSKQP---TNYFCKTLTAS 134
            NV + A+ +TDEVYAQ+ L P    E + T VP E     P+  P      FCKTLTAS
Sbjct: 74  LNVELKAETDTDEVYAQIMLMP----EPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTAS 129

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +
Sbjct: 130 DTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQS 189

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A 
Sbjct: 190 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAW 249

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ G
Sbjct: 250 HAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTG 308

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TI G  +LDP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P+ P +   R K
Sbjct: 309 TIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAK 367

Query: 375 RP 376
           RP
Sbjct: 368 RP 369



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 8/136 (5%)

Query: 653 VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRF 711
           +  +P G      +    +Q + +   ++    Q   TR+  KV+K G ++GRS+D+S+F
Sbjct: 646 IECLPEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKF 705

Query: 712 SSYNELREELGQMFGIEGKFEDPLRSG---WQLVFVDRENDVLLLGDDPWEAFVSNVWYI 768
           + Y EL+ EL +MF  EG+    L SG   WQ+V+ D E D++L+GDDPWE F S V  I
Sbjct: 706 TDYGELQAELDKMFDFEGE----LVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKI 761

Query: 769 KILSPEDVQKMGEQGV 784
            I + E+VQKM  +  
Sbjct: 762 YIYTKEEVQKMNSKSA 777


>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
          Length = 645

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/367 (53%), Positives = 256/367 (69%), Gaps = 3/367 (0%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV++P    RV YFPQGH EQ+ A+ ++ +D  +P++ NLP +++
Sbjct: 19  NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPSKIL 77

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P     + FCKTLTASDT
Sbjct: 78  CKVVNVHLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDT 136

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 196

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRL AGD+ +F+  E  +L +G+RR +R    +P SV+SS SMH+G+LA A+HA
Sbjct: 197 SVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHA 256

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T + F+VF+ PRASPSEF++ + KY++A  H +VSVGMRF+M FE +E+  RR+ GTI
Sbjct: 257 ITTGTLFSVFYKPRASPSEFIVSVNKYLEARNH-KVSVGMRFKMRFEGDEAPERRFSGTI 315

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL T     +    R KRP
Sbjct: 316 VGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQPMQRSKRP 375

Query: 377 WHPSTSS 383
             P  SS
Sbjct: 376 RSPVLSS 382



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D+++FSSY EL  +L +MF I+G+   P +  WQ+V+ D E+D
Sbjct: 521 RSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKK-WQVVYTDDEDD 579

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 580 MMMVGDDPWHEFCSMVRKIFIYTVEEVKEL 609


>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 822

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/362 (53%), Positives = 254/362 (70%), Gaps = 12/362 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LPP+L+C++
Sbjct: 21  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRV 79

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--GIPSKQP---TNYFCKTLTAS 134
            NV + A+ +TDEVYAQ+ L P    E + T VP E     P+  P      FCKTLTAS
Sbjct: 80  LNVELKAETDTDEVYAQIMLMP----EPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTAS 135

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +
Sbjct: 136 DTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQS 195

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A 
Sbjct: 196 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAW 255

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ G
Sbjct: 256 HAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTG 314

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           TI G  +LDP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P+ P +   R K
Sbjct: 315 TIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAK 373

Query: 375 RP 376
           RP
Sbjct: 374 RP 375



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 8/113 (7%)

Query: 653 VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRF 711
           +  +P G      +    +Q + +   ++    Q   TR+  KV+K G ++GRS+D+S+F
Sbjct: 652 IECLPEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKF 711

Query: 712 SSYNELREELGQMFGIEGKFEDPLRSG---WQLVFVDRENDVLLLGDDPWEAF 761
           + Y EL+ EL +MF  EG+    L SG   WQ+V+ D E D++L+GDDPWE  
Sbjct: 712 TDYGELQAELDKMFDFEGE----LVSGSQNWQIVYTDDEGDMMLVGDDPWEVL 760


>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
          Length = 905

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/340 (57%), Positives = 245/340 (72%), Gaps = 6/340 (1%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQLICQLHN 81
           ELWHACAGPL+SLP  G  VVYFPQGH EQ+++T  ++     P  P +LPPQ+ C++ N
Sbjct: 40  ELWHACAGPLISLPKKGALVVYFPQGHIEQLSSTFKQQPPLPPPMSPYDLPPQIFCRVLN 99

Query: 82  VTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE---LGIPSKQPTNYFCKTLTASDTST 138
           V + AD ETDEV+AQ+TL P  PE   D F   E     + SK   + FCKTLTASDTST
Sbjct: 100 VNLLADQETDEVFAQVTLVP-EPEPVGDNFQDEENQNASVLSKPTLHMFCKTLTASDTST 158

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH VEWKFRHI+RGQP+RHLLTTGWSV
Sbjct: 159 HGGFSVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQPRRHLLTTGWSV 218

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS K L    +VLF+  E  +L LGIRR  R  + +PSSV S  ++++ ++AAA +A A
Sbjct: 219 FVSPKVLSLXYAVLFLRGENGELRLGIRRNNRKLSSVPSSVFSDQNVYLSVIAAATNAVA 278

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T S F +F+NPRASP+EF+IP  KYV++   + + VG RFRM FE+E+++ +RY G +T 
Sbjct: 279 TKSMFHIFYNPRASPAEFIIPYQKYVRSCKQSLL-VGTRFRMKFESEDTAEKRYTGIVTS 337

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           I D DPV+W  S WRS+KV WDE +  ERQ RVS WEIEP
Sbjct: 338 IGDADPVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIEP 377



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSGSV-GRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q T  R   KV+K GSV GR++D+S+F  Y++L  EL ++F +EG   +P + GWQ+V+ 
Sbjct: 799 QPTIVRKCTKVHKQGSVVGRAIDLSKFDGYDQLINELERLFDMEGLLNNPEK-GWQVVYT 857

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D E+DV+L+GDDPW+ F + V  I I + ++VQK+
Sbjct: 858 DNEDDVMLVGDDPWQEFCNIVCKILIYTHDEVQKL 892


>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
          Length = 836

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/364 (53%), Positives = 256/364 (70%), Gaps = 11/364 (3%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C+
Sbjct: 20  ALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCE 78

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTL 131
           + NV + A+ +TDEVYAQ+TL P S +++ +     E  +PS     +       FCKTL
Sbjct: 79  VMNVELKAEPDTDEVYAQLTLLPESKQQEDNGST--EEEVPSAPAAGHVRPRVHSFCKTL 136

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHL
Sbjct: 137 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 196

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA
Sbjct: 197 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLA 256

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R
Sbjct: 257 TAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KQNYSIGMRFKMRFEGEEAPEQR 315

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           + GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   
Sbjct: 316 FTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVP 375

Query: 372 RLKR 375
           R KR
Sbjct: 376 RTKR 379



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 674 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 732
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 691 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 750

Query: 733 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 751 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 809

Query: 793 QRANSRGNCGRDPVGSL 809
             +  RG+ GR+  G L
Sbjct: 810 ANSMERGSVGREMRGCL 826


>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
 gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
          Length = 671

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/369 (53%), Positives = 260/369 (70%), Gaps = 8/369 (2%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ N+ ++  +P++ NLP +++
Sbjct: 17  NDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPSKIL 75

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASD 135
           C++ N+ + A+ ETDEVYAQ+TL P +  +Q +   P + L  P +   + FCKTLTASD
Sbjct: 76  CKVVNIHLRAEPETDEVYAQITLLPET--DQSEVTSPDDPLPEPPRCTVHSFCKTLTASD 133

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSV RR A+   P LD + QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTG
Sbjct: 134 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTG 193

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  + MPSSV+SS SMH+G+LA A+H
Sbjct: 194 WSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASH 253

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           A +T + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE +E   RR+ GT
Sbjct: 254 AISTGTLFSVFYKPRTSRSEFIVSINKYLEARNH-KLSVGMRFKMRFEGDEVPERRFSGT 312

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           I G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL + P   S    R KR
Sbjct: 313 IVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANSQPTQRNKR 372

Query: 376 ---PWHPST 381
              P  PST
Sbjct: 373 SRPPILPST 381



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 10/111 (9%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF IEG+     +  W +V+ D E+D
Sbjct: 547 RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKK-WLVVYTDNEDD 605

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN 800
           ++++GDDPW  F S V  + I +PE+V+K+        SP  G  +N  G 
Sbjct: 606 MMMVGDDPWLEFCSVVRKMFIYTPEEVKKL--------SPKIGLPSNEEGK 648


>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
          Length = 839

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/374 (50%), Positives = 261/374 (69%), Gaps = 5/374 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L +ELW+ACAGPLVS+P    RV YFPQGH EQV A+T++  D  +P Y NLP +++C+
Sbjct: 40  ALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVY-NLPSKILCR 98

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEV+AQ+TL P + +++           P +   + FCKTLTASDTST
Sbjct: 99  VINVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTST 158

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 159 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 218

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 219 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAIS 278

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y++++  +  ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 279 TGTLFTVYYKPRTSPSEFIVPYDQYMESIKKS-YTIGMRFKMRFEGEEAPEQRFTGTIIG 337

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
             D DP RW +S WR +KV WDE++   R  +VS W+IEP       P+L PL + RP  
Sbjct: 338 CEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALA---PPALNPLPMTRPKR 394

Query: 379 PSTSSFNDNRDETA 392
           P ++  + + D + 
Sbjct: 395 PRSNMVSTSPDSSV 408



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q T  R+  KV+K G ++GRS+D+SRF++Y+EL  EL Q+F   G+ + P +  W +V+ 
Sbjct: 709 QGTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELQAP-KKNWLIVYT 767

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D E D++L+GDDPW  F   V  I I + E+VQKM
Sbjct: 768 DDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKM 802


>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/369 (53%), Positives = 261/369 (70%), Gaps = 8/369 (2%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ N+ ++  +P++ NLP +++
Sbjct: 10  NDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPSKIL 68

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASD 135
           C++ NV + A+ ETDEVYAQ+TL P +  +Q +   P +    S + T + FCKTLTASD
Sbjct: 69  CKVVNVHLRAEPETDEVYAQITLLPEA--DQSEVTSPDDPLPESPRCTVHSFCKTLTASD 126

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSV RR A+   P LD + QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTG
Sbjct: 127 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTG 186

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  + MPSSV+SS SMH+G+LA A+H
Sbjct: 187 WSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQHSNMPSSVISSHSMHLGVLATASH 246

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           A AT + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE +E   RR+ GT
Sbjct: 247 AIATGTLFSVFYKPRTSRSEFIVSVNKYLEAQSH-KLSVGMRFKMRFEGDEVPERRFSGT 305

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP---MYPSLFPLR 372
           I G+ D   + W++S WRS+KV WDE ++  R  RVS WE+EPL + P     PS    R
Sbjct: 306 IVGVEDNKSLVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSNPPTNSQPSQRNKR 365

Query: 373 LKRPWHPST 381
            + P  PST
Sbjct: 366 SRPPILPST 374



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF I G+     +  WQ+V+ D E+D
Sbjct: 541 RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDINGELCGSTKE-WQVVYTDNEDD 599

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+K+
Sbjct: 600 MMMVGDDPWLEFCSIVRKIFIYTAEEVKKL 629


>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
 gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
          Length = 671

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/347 (54%), Positives = 249/347 (71%), Gaps = 3/347 (0%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ ++ ++  +P++ +LP +
Sbjct: 10  GCNDALYKELWHACAGPLVNLPREGERVYYFPQGHMEQLEASMHQGLEPQMPSF-DLPSK 68

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           ++C++ NV   A+ ETDEVYAQ+TL P  P++ + T     L  P +   + FCKTLTAS
Sbjct: 69  ILCKVVNVQRKAEPETDEVYAQITLLP-DPDQSEVTSPDTPLPEPERCTVHSFCKTLTAS 127

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV RR A+   P LD S QPP QEL+A DLH  +W FRHIFRGQP+RHLLTT
Sbjct: 128 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTT 187

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T MPSSV+SS SMH+G+LA A+
Sbjct: 188 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATAS 247

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA AT + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE   RR+ G
Sbjct: 248 HAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSH-KLSVGMRFKMRFEGEEVPERRFSG 306

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           TI G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL  
Sbjct: 307 TIVGVGDNVSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVA 353



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF IEG+        WQ+V+ D E+D
Sbjct: 545 RSCTKVHMQGIAVGRAVDLTRFECYEDLLRKLEEMFDIEGELSG-FSKKWQVVYTDDEDD 603

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 604 MMMVGDDPWHEFCSMVRKIFIYTSEEVKRL 633


>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 821

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/361 (51%), Positives = 251/361 (69%), Gaps = 5/361 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  + H+P Y +L P+++C+
Sbjct: 43  ALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVY-DLRPKILCR 101

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 102 VINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTST 161

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 162 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 221

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  
Sbjct: 222 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVL 281

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 282 TGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGTIVG 340

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I D D  RW  S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 341 IEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA---PPALNPLPMPRPKR 397

Query: 379 P 379
           P
Sbjct: 398 P 398



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 671 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 729
           +Q S   + +V    Q    R+  KV+K G ++GRS+D+++FS Y+EL  EL Q+F   G
Sbjct: 678 LQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRG 737

Query: 730 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           +   P +  W +VF D E D++L+GDDPW+ F S V  I I   E++QKM
Sbjct: 738 ELISPQKD-WLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKM 786


>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
          Length = 718

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/373 (50%), Positives = 261/373 (69%), Gaps = 5/373 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L +ELW+ACAGPLVS+P    RV YFPQGH EQV A+T++  D  +P Y NLP +++C+
Sbjct: 40  ALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVY-NLPSKILCR 98

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEV+AQ+TL P + +++           P +   + FCKTLTASDTST
Sbjct: 99  VINVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTST 158

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 159 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 218

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 219 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAIS 278

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SPSEF++P  +Y++++  +  ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 279 TGTLFTVYYKPRTSPSEFIVPYDQYMESIKKS-YTIGMRFKMRFEGEEAPEQRFTGTIIG 337

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
             D DP RW +S WR +KV WDE++   R  +VS W+IEP       P+L PL + RP  
Sbjct: 338 CEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALA---PPALNPLPMTRPKR 394

Query: 379 PSTSSFNDNRDET 391
           P ++  + + D +
Sbjct: 395 PRSNMVSTSPDSS 407


>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/361 (53%), Positives = 255/361 (70%), Gaps = 10/361 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LPP+L+C++
Sbjct: 18  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRV 76

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELGIPSKQPTNYFCKTLTASDT 136
            NV + A+ +TDEVYAQ+ L P  PE+ +   D         P +     FCKTLTASDT
Sbjct: 77  INVELKAEADTDEVYAQVMLMP-EPEQNEMAVDKSTSTTGATPPRPAVRSFCKTLTASDT 135

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +GW
Sbjct: 136 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQSGW 195

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA
Sbjct: 196 SVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHA 255

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ GTI
Sbjct: 256 INTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTI 314

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKR 375
            G  +LD + W  S+WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+KR
Sbjct: 315 VGSENLDQL-WPESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRVKR 371

Query: 376 P 376
           P
Sbjct: 372 P 372



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 2/94 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+S+F  Y+EL  EL +MF  +G+     R  WQ+V+ D E 
Sbjct: 679 TRSCTKVHKQGVALGRSVDLSKFGDYDELTAELDRMFEFDGELMSSNRD-WQIVYTDPEG 737

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 738 DMMLVGDDPWEEFCSIVRKIFIYTKEEVQKMNSK 771


>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 766

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/361 (51%), Positives = 251/361 (69%), Gaps = 5/361 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  + H+P Y +L P+++C+
Sbjct: 43  ALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVY-DLRPKILCR 101

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 102 VINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTST 161

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 162 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 221

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  
Sbjct: 222 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVL 281

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 282 TGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGTIVG 340

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           I D D  RW  S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 341 IEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA---PPALNPLPMPRPKR 397

Query: 379 P 379
           P
Sbjct: 398 P 398



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 2/90 (2%)

Query: 671 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 729
           +Q S   + +V    Q    R+  KV+K G ++GRS+D+++FS Y+EL  EL Q+F   G
Sbjct: 678 LQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRG 737

Query: 730 KFEDPLRSGWQLVFVDRENDVLLLGDDPWE 759
           +   P +  W +VF D E D++L+GDDPW+
Sbjct: 738 ELISPQKD-WLVVFTDNEGDMMLVGDDPWQ 766


>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/369 (53%), Positives = 260/369 (70%), Gaps = 8/369 (2%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ N+ ++  +P++ NLP +++
Sbjct: 10  NDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPSKIL 68

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASD 135
           C++ NV + A+ ETDEVYAQ+TL P +  +Q +   P +    S + T + FCKTLTASD
Sbjct: 69  CKVVNVHLRAEPETDEVYAQITLLPEA--DQSEVTSPDDPLPESPRCTVHSFCKTLTASD 126

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSV RR A+   P LD + QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTG
Sbjct: 127 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTG 186

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  + MPSSV+SS SMH+G+LA A+H
Sbjct: 187 WSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASH 246

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           A AT + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE +E   RR+ GT
Sbjct: 247 AIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSH-KLSVGMRFKMRFEGDEVPERRFSGT 305

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY---PSLFPLR 372
           I G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL + P     PS    R
Sbjct: 306 IVGVGDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPTNPQPSQRNKR 365

Query: 373 LKRPWHPST 381
            + P  PST
Sbjct: 366 SRPPILPST 374



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF I G+     +  WQ+V+ D E+D
Sbjct: 541 RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDITGELCGSTKK-WQVVYTDNEDD 599

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+K+
Sbjct: 600 MMMVGDDPWLEFCSIVRKIFIYTAEEVRKL 629


>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
 gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
          Length = 846

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/360 (52%), Positives = 248/360 (68%), Gaps = 2/360 (0%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +  L +ELW +CAGPLV++P  G  V YFPQGH EQV A+TN+  D  +P Y NLP +++
Sbjct: 37  DTALYTELWRSCAGPLVTVPREGELVYYFPQGHIEQVEASTNQVADQQMPLY-NLPSKIL 95

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ NV + A+ +TDEVYAQ+TL P   +++           P +   + FCKTLTASDT
Sbjct: 96  CRVVNVLLKAEPDTDEVYAQVTLMPEPNQDENAVKKEPMRPPPPRFHVHSFCKTLTASDT 155

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GW
Sbjct: 156 STHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGW 215

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R     PSSV+SS SMH+G+LA A HA
Sbjct: 216 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNAPSSVISSHSMHLGVLATAWHA 275

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T + FTV++ PR SP+EF++P   Y+++V     S+GMRF+M FE EE+  +R+ GTI
Sbjct: 276 IQTKTMFTVYYKPRTSPAEFIVPYDHYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTI 334

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            GI D DP RW  S WR +KV WDE+++  R  RVS W+IEP  + P        R KRP
Sbjct: 335 VGIEDADPQRWLESKWRCLKVRWDENSSIPRPDRVSPWKIEPALSPPALNVPPVARPKRP 394



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G+ +GRS+D+++F++Y+EL  EL Q+F   G+ +   +S W +V+ D E 
Sbjct: 719 TRSCTKVHKQGTALGRSVDLAKFNNYDELIAELDQLFDFNGELKARSKS-WLVVYTDDEG 777

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+VQ+M
Sbjct: 778 DMMLVGDDPWQEFCGMVRKIFIYTKEEVQRM 808


>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
 gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
          Length = 853

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/363 (52%), Positives = 255/363 (70%), Gaps = 11/363 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C++
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 96

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTLT 132
            NV + A+ +TDEVYAQ+TL P   +++ +     E  +PS     +       FCKTLT
Sbjct: 97  MNVELKAEPDTDEVYAQLTLLPELKQQEDNGST--EEEVPSAPAAGHVRPRVHSFCKTLT 154

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL
Sbjct: 155 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLL 214

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
            +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA 
Sbjct: 215 QSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLAT 274

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+
Sbjct: 275 AWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KRNYSIGMRFKMRFEGEEAPEQRF 333

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
            GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   R
Sbjct: 334 TGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPR 393

Query: 373 LKR 375
            KR
Sbjct: 394 TKR 396



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 674 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 732
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 708 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 767

Query: 733 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 768 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 826

Query: 793 QRANSRGNCGRDPVGSL 809
             +  RG+ GR+  G L
Sbjct: 827 ANSMERGSVGREMRGCL 843


>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 715

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/368 (51%), Positives = 254/368 (69%), Gaps = 6/368 (1%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G E +   L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  + H+P Y +L
Sbjct: 37  GREAE-AALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVY-DL 94

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
            P+++C++ NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTL
Sbjct: 95  RPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTL 154

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHL
Sbjct: 155 TASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHL 214

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           L +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA
Sbjct: 215 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 274

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A HA  T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R
Sbjct: 275 TAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQR 333

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           + GTI GI D D  RW  S WR +KV WDE++   R  RVS W+IEP       P+L PL
Sbjct: 334 FTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA---PPALNPL 390

Query: 372 RLKRPWHP 379
            + RP  P
Sbjct: 391 PMPRPKRP 398


>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
          Length = 840

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/363 (52%), Positives = 255/363 (70%), Gaps = 6/363 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y +L  +++C++
Sbjct: 34  LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIY-DLRSKILCRV 92

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            NV + A  +TDEV+AQ+TL P   +++          +  +   + FCKTLTASDTSTH
Sbjct: 93  INVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTH 152

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR AE+  P LD S QPP Q+L+A+DLH  EW+FRHIFRGQP+RHLL +GWSVF
Sbjct: 153 GGFSVLRRHAEECLPELDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 212

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+KRLVAGD+ +F+  EK +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +T
Sbjct: 213 VSSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 271

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + FTV++ PR SP+EF++P  +Y+++V  +  S+GM F M FE EE+  +RY GTI GI
Sbjct: 272 GTMFTVYYKPRISPAEFIVPFDQYMESV-KSNYSIGMGFEMRFEGEEAPEQRYTGTIVGI 330

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHP 379
            D DP RW +S WR +KV WDE++   R  RVS W+IEP    P+  +L PL L RP  P
Sbjct: 331 EDADPQRWPDSKWRCLKVRWDETSTVPRPERVSPWKIEPALA-PL--ALNPLPLSRPKRP 387

Query: 380 STS 382
            ++
Sbjct: 388 RSN 390



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 7/113 (6%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV+K G ++GRS+D+S+F++Y EL  EL ++F   G+   P +  W +++ D E 
Sbjct: 713 SRSCTKVHKQGIALGRSVDLSKFNNYEELIAELDRLFEFGGELMTP-KKNWLIIYTDDEG 771

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG-----EQGVESFSPSSGQRAN 796
           D++L+GDDPW+ F   V  I I + E+VQKM       +G E+ S   G  A 
Sbjct: 772 DIMLVGDDPWKEFCGMVRKIFIYTREEVQKMKPGSSLSKGDENLSIGEGTEAK 824


>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
 gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
 gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
          Length = 677

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/377 (53%), Positives = 264/377 (70%), Gaps = 10/377 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G  GD   L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NL
Sbjct: 11  GSAGD--ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NL 67

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           P +++C++ NV + A+ ++DEVYAQ+ LQP + E+ + T    E   P +   + FCKTL
Sbjct: 68  PHKILCKVVNVELRAETDSDEVYAQIMLQPQT-EQSEPTSPDPEPPEPERCNIHSFCKTL 126

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 127 TASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHL 186

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA
Sbjct: 187 LTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLA 246

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A+HA +T + F+VF+ PR S SEFV+ + KY++A  H ++SVGMRF+M FE +ES  RR
Sbjct: 247 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KMSVGMRFKMRFEGDESPERR 305

Query: 312 YMGTITGISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
           + GTI G+  + P      W+NS WRS+KV WDE +A  R  RVS WE+EPL      P 
Sbjct: 306 FSGTIIGMGCM-PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEPLDRTNPQPP 364

Query: 368 LFPLRLKRPWHPSTSSF 384
             PLR KR   P++ S 
Sbjct: 365 QPPLRNKRARPPASPSI 381



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 10/160 (6%)

Query: 626 VFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMP-----LGDSGFHNSMYGCMQDSSELLHN 680
           +FG+ I SS +    TV+S      P   S+      L      N        SS+   N
Sbjct: 478 LFGIEIGSSAVSPVVTVASVGHDPPPPALSVDAESDQLSQPSHANKATDAPAASSDRSPN 537

Query: 681 VGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 739
             +  Q    R+  KV   G +VGR++D++R   Y++LR +L +MF I G+    L+  W
Sbjct: 538 ETESRQ---ARSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIPGELSASLKK-W 593

Query: 740 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++ D E+D++L+GDDPW  F   V  I I S E+ + +
Sbjct: 594 KVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSL 633


>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
 gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/347 (55%), Positives = 246/347 (70%), Gaps = 3/347 (0%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G N  L  ELWHACAGPLV+LP  G  V YFPQGH EQ+ A+ ++ ++  +P + NLP +
Sbjct: 18  GCNDALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEASMHQGMEPQMPLF-NLPSK 76

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           ++C++ NV   A+ ETDEVYAQ+TL P  P++ + T     L  P +   + FCKTLTAS
Sbjct: 77  ILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDPPLPEPERCTVHSFCKTLTAS 135

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV RR A+   P LD S QPP QEL+A DLH  EW FRHIFRGQP+RHLLTT
Sbjct: 136 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 195

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T MPSSV+SS SMH+G+LA A+
Sbjct: 196 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATAS 255

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA AT + F+VF+ PR S SEF++ L KY++   H ++SVGMRF+M FE EE   RR+ G
Sbjct: 256 HAIATGTLFSVFYKPRTSRSEFIVSLNKYLEVRNH-KLSVGMRFKMRFEGEEVPERRFSG 314

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           TI G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL  
Sbjct: 315 TIVGVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLVA 361



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 10/111 (9%)

Query: 670 CMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIE 728
           C++ S EL        Q    R+  KV+  G +VGR++D+++F  Y +L  +L +MF IE
Sbjct: 525 CLRSSQEL--------QSRQIRSCTKVHMQGVAVGRAVDLTQFKRYEDLLRKLEEMFDIE 576

Query: 729 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           G+     +  WQ+V+ D E+D++ +GDDPW  F   V  I I + E+V+++
Sbjct: 577 GELSGSTKK-WQVVYTDNEDDMMKVGDDPWNEFCGMVKKIFIYTSEEVKRL 626


>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
          Length = 888

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/386 (50%), Positives = 267/386 (69%), Gaps = 9/386 (2%)

Query: 1   MKLSTSGLCQQGHEGD----NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAAT 56
           + ++ SG  Q+GH          L  ELWHACAGPLV++P    RV YFPQGH EQV A+
Sbjct: 63  LNVAVSGEGQKGHSSRVVDAEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAS 122

Query: 57  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL 116
           TN+  +  +P Y +LP +++C++ NV + A+V++DEVYAQ+TL P + +++         
Sbjct: 123 TNQAAEQQMPLY-DLPSKILCRVINVDLKAEVDSDEVYAQITLLPEAIQDENAIEKEAPP 181

Query: 117 GIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE 176
             P +   + FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  E
Sbjct: 182 PPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANE 241

Query: 177 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP 236
           W+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    + 
Sbjct: 242 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVS 301

Query: 237 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 296
           SSV+SS SMH+G+LA A HA +T + F+V++ PR SPSEF++P  +Y+++V     S+GM
Sbjct: 302 SSVISSHSMHLGVLATAWHAISTGTMFSVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGM 360

Query: 297 RFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 356
           RF+M FE EE+  +R+ GTI GI D DP RW+ S WRS+KV WDE+++  R  RVS W++
Sbjct: 361 RFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKL 420

Query: 357 EPLTTFPMYPSLFPLRLKRPWHPSTS 382
           EP       P+L P+ + RP  P ++
Sbjct: 421 EPALA---PPALSPVPMPRPKRPRSN 443



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV K G ++GRS+D+S+F +Y EL  EL +MF   G+   P +  W +V+ D EN
Sbjct: 761 SRSCTKVQKQGIALGRSVDLSKFQNYEELIAELDRMFEFNGELMAP-KKDWLIVYTDDEN 819

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 820 DMMLVGDDPWQEFCGMVRKISIYTKEEVRKM 850


>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
 gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
          Length = 657

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/366 (51%), Positives = 260/366 (71%), Gaps = 7/366 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN-KEVDSHIPNYPNLPPQLICQ 78
           L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+ + +++D ++P + +LPP+++C+
Sbjct: 19  LYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMF-DLPPKILCR 77

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ ++DEVYAQ+ LQP + ++ + T +  E     K   + FCKTLTASDTST
Sbjct: 78  VVNVELRAEADSDEVYAQIMLQPEA-DQNELTSLDAEPQEREKCTAHSFCKTLTASDTST 136

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQPKRHLLTTGWSV
Sbjct: 137 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSV 196

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLV+GD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 197 FVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAIS 256

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F+VF+ PR S S+F++ + KY++A    ++SVGMRF+M FE +++  RR+ GTI G
Sbjct: 257 TGTLFSVFYKPRTSRSDFIVSVNKYLEAK-KQKISVGMRFKMRFEGDDAPERRFSGTIIG 315

Query: 319 ISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           I  L  +    W++S WRS+KV WDE ++  R  R+S WE+EPL          PLR KR
Sbjct: 316 IGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDAANPQSPQPPLRAKR 375

Query: 376 PWHPST 381
           P  P++
Sbjct: 376 PRPPAS 381



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D+++ S Y++L ++L +MF I+G+    L+  W+++F D E+
Sbjct: 545 VRSCTKVIMQGMAVGRAVDLTKLSGYSDLCQKLEEMFDIQGELGSTLKK-WRVIFTDDED 603

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+ +K+
Sbjct: 604 DMMLVGDDPWDEFCRMVKRIYIYTYEEAKKL 634


>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
          Length = 857

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/364 (53%), Positives = 255/364 (70%), Gaps = 13/364 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV++P VG +  YFPQGH EQV A+TN+  +  +  Y NLP +++C++
Sbjct: 37  LFTELWSACAGPLVTVPRVGEKEFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 95

Query: 80  HNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNY-------FCKTL 131
            NV + A+ +TDEVYAQ+TL P L  +E   +    E  +PS     +       FCKTL
Sbjct: 96  MNVELKAEPDTDEVYAQLTLLPELKRQEDNGS---TEEEVPSAPAAGHVRPRVHSFCKTL 152

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHL
Sbjct: 153 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 212

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA
Sbjct: 213 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLA 272

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE+EE+  +R
Sbjct: 273 TAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KRNYSIGMRFKMRFESEEAPEQR 331

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           + GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   
Sbjct: 332 FTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVP 391

Query: 372 RLKR 375
           R KR
Sbjct: 392 RTKR 395



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 2/131 (1%)

Query: 680 NVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 738
           N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ + P +  
Sbjct: 718 NMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKE- 776

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSR 798
           W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    +   S  S   +  R
Sbjct: 777 WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNLRSEDSHANSMER 836

Query: 799 GNCGRDPVGSL 809
           G+ GR+  G L
Sbjct: 837 GSVGREMRGCL 847


>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
          Length = 672

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/377 (52%), Positives = 261/377 (69%), Gaps = 10/377 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G  GD   L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + +L
Sbjct: 11  GSAGD--ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-DL 67

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           PP+++C++ NV + A+ ++DEVYAQ+ LQP + ++ + T    E   P +     FCKTL
Sbjct: 68  PPKILCKVVNVELRAETDSDEVYAQIMLQPEA-DQSEPTSPDSEPPEPERCNVYSFCKTL 126

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 127 TASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHL 186

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS +MH+G+LA
Sbjct: 187 LTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHLGVLA 246

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A+HA +T + F+VF+ PR S SEFV+ + KY++A  H +VSVGMRF+M FE +ES  RR
Sbjct: 247 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KVSVGMRFKMRFEGDESPERR 305

Query: 312 YMGTITGISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
             GTI G+  + P      W+NS WRS++V WDE +A  R  RVS WE+EPL      P 
Sbjct: 306 LSGTIIGLGSM-PANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDATNPQPP 364

Query: 368 LFPLRLKRPWHPSTSSF 384
              LR KR   P+  S 
Sbjct: 365 QPHLRNKRARPPALLSI 381



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D++R   Y +L  +L +MF I+G+    L+  W++++ D E+
Sbjct: 541 VRSCTKVIMQGMAVGRAVDLTRLDGYADLHRKLEEMFDIQGELSANLKK-WKVIYTDDED 599

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           D +L+GDDPW  F+  V  I I S E+ + +  + 
Sbjct: 600 DTMLVGDDPWNEFLRMVKRIYIYSYEEAKSLTRKA 634


>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
           [Medicago truncatula]
          Length = 670

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/373 (52%), Positives = 260/373 (69%), Gaps = 12/373 (3%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ N+ ++  +P++ NLP +++
Sbjct: 12  NDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPSKIL 70

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASD 135
           C++ N+ + A+ ETDEVYAQ+TL P +  +Q +   P + L  P +   + FCKTLTASD
Sbjct: 71  CKVVNIHLRAEPETDEVYAQITLLPET--DQSEVTSPDDPLPEPPRCTVHSFCKTLTASD 128

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSV RR A+   P LD + QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTG
Sbjct: 129 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTG 188

Query: 196 WSVFVSAKRLVAGDSVLF----IWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           WSVFVS+K+LVAGD+ +F    +  E  +L +G+RR +R  + MPSSV+SS SMH+G+LA
Sbjct: 189 WSVFVSSKKLVAGDAFIFLRQVVLGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLA 248

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A+HA +T + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE +E   RR
Sbjct: 249 TASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNH-KLSVGMRFKMRFEGDEVPERR 307

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           + GTI G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL + P   S    
Sbjct: 308 FSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANSQPTQ 367

Query: 372 RLKR---PWHPST 381
           R KR   P  PST
Sbjct: 368 RNKRSRPPILPST 380



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 10/111 (9%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF IEG+     +  W +V+ D E+D
Sbjct: 546 RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKK-WLVVYTDNEDD 604

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN 800
           ++++GDDPW  F S V  + I +PE+V+K+        SP  G  +N  G 
Sbjct: 605 MMMVGDDPWLEFCSVVRKMFIYTPEEVKKL--------SPKIGLPSNEEGK 647


>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
          Length = 748

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/386 (53%), Positives = 264/386 (68%), Gaps = 21/386 (5%)

Query: 14  EGDNKCLNSE----LWHACAGPLVSLPTVGTRVVYFPQGHSEQ-VAATTNKEVDSHIPNY 68
           E +N C  S     LWHACAGPL SLP  G  VVYFPQGH EQ + A+   E    IP+ 
Sbjct: 9   ESENGCCPSSICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSX 68

Query: 69  PNLPPQLICQLHNVTMHADVETDEVYAQMTL-----QPLSPEEQKDTFVPIELGIP--SK 121
            +LPPQ+ C++ NV +HA+ ETDEVYAQ+TL          E  + + V  E GI    K
Sbjct: 69  -HLPPQVFCRVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHK 127

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
              + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EWKFRH
Sbjct: 128 STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRH 187

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS-SVL 240
           I+RGQP+RHLLTTGWS+FV+ + LV+GD+VLF+  +  +L LGIRRA  P +++P+ SVL
Sbjct: 188 IYRGQPRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVL 247

Query: 241 SSD-SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           S      + +L+AAA+A ++ S F +F+NPRASPSEFVIP  KYV+ + +  V VGMRF+
Sbjct: 248 SGQWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCI-NRPVCVGMRFK 306

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M FE E+++ RR  G ITGI D+DP+RW +S WR + V WDE    E + RVS WEIEP 
Sbjct: 307 MRFEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEP- 365

Query: 360 TTFPMYPSLFPLRLK--RPWHPSTSS 383
           +  P  P+L   RLK  RP  PS ++
Sbjct: 366 SVLP--PALNVPRLKKLRPSLPSGAA 389



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+K GS VGRS+D+S+ + Y++L  EL Q+F +EG   DP   GW++V+ D END
Sbjct: 631 RSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDP-EKGWRVVYTDNEND 689

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW+ F   V  I I + +DV+ M
Sbjct: 690 MVLVGDDPWQEFCDVVCKILICTQDDVENM 719


>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
          Length = 814

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/363 (52%), Positives = 256/363 (70%), Gaps = 14/363 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  D+ +  Y +LP +L+C +
Sbjct: 19  LFNELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADNQMRLY-DLPSKLLCSV 77

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPE-----EQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
            NV + A+ +TDEVYAQ+ L P + +     E+  +     L  P+      FCKTLTAS
Sbjct: 78  INVELKAEADTDEVYAQVMLIPENDQNEMAVEKSSSKAATTLAKPA---VRSFCKTLTAS 134

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +
Sbjct: 135 DTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQS 194

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A 
Sbjct: 195 GWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAW 254

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+G+RFRM FE EE+  +R+ G
Sbjct: 255 HAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGVRFRMRFEGEEAPEQRFTG 313

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RL 373
           TI G  +LDP+ W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+
Sbjct: 314 TIIGSENLDPL-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRV 370

Query: 374 KRP 376
           KRP
Sbjct: 371 KRP 373



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 66/94 (70%), Gaps = 2/94 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+S+FS Y+EL+ EL +MF  +G+     ++ WQ+V+ D E+
Sbjct: 692 TRSCTKVHKQGVALGRSVDLSKFSDYDELKAELDKMFEFDGELMSSNKN-WQIVYTDNED 750

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           D++L+GDDPW  F S V  I I + E+VQKM  +
Sbjct: 751 DMMLVGDDPWGEFCSIVRKICIYTKEEVQKMNSK 784


>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 620

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/363 (55%), Positives = 252/363 (69%), Gaps = 18/363 (4%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           LN ELWHACAGPL  LP V + V+Y+PQGH EQV A    +V      + NLP  L+C++
Sbjct: 4   LNCELWHACAGPLTQLPPVDSLVMYWPQGHIEQVRAA---DVYQASKQFSNLPAHLLCRI 60

Query: 80  HNVTMHADVETDEVYAQMTLQP---LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
             + + AD +TDEV+AQM L P   LS +E KD   PI+     +     FCKTLTASDT
Sbjct: 61  SKIELQADPQTDEVFAQMDLTPQYELS-KETKDAPSPIQ-----QSNVRSFCKTLTASDT 114

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSVPRRAAE+  P LD ++ PP QEL+A+DLH  +W FRHI+RG P+RHLLTTGW
Sbjct: 115 STHGGFSVPRRAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLTTGW 174

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS KRLVAGD+V+F+  E  QL +G+RRA +      S+  SS ++H+G+LAAA+HA
Sbjct: 175 SVFVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQQPQARSTHFSSANLHLGVLAAASHA 234

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
           A     F+V +NPR SPSEFVIP  KY+++     ++VG RF+M FETEES+ RRY GTI
Sbjct: 235 ATERLRFSVIYNPRTSPSEFVIPYHKYLRSE-DNNLTVGSRFKMKFETEESTERRYSGTI 293

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL---TTFPMYPSLFPLRL 373
             ISD+DP++W +S WRS+KV WDES A ER  RVS WEIEPL   +T P  P + P   
Sbjct: 294 VEISDVDPLKWPSSAWRSMKVEWDES-ASERHERVSPWEIEPLVPISTLPT-PPVGPRPK 351

Query: 374 KRP 376
           +RP
Sbjct: 352 RRP 354



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 1/90 (1%)

Query: 687 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           + P R+  KVY SG VGR++D+ +  SY  LR  L  +FG+EG+ +D +  GWQLV+ D 
Sbjct: 505 VAPVRSGTKVYYSGKVGRTIDLKKCESYAALRRMLASLFGLEGQLDD-VTKGWQLVYTDH 563

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           ENDVLL+GDDPWE F + V  +K+LSP+D 
Sbjct: 564 ENDVLLVGDDPWEEFCNCVRSLKVLSPQDA 593


>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
 gi|238014618|gb|ACR38344.1| unknown [Zea mays]
 gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
          Length = 511

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/377 (52%), Positives = 261/377 (69%), Gaps = 10/377 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G  GD   L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + +L
Sbjct: 11  GSAGD--ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-DL 67

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           PP+++C++ NV + A+ ++DEVYAQ+ LQP + ++ + T    E   P +     FCKTL
Sbjct: 68  PPKILCKVVNVELRAETDSDEVYAQIMLQPEA-DQSEPTSPDSEPPEPERCNVYSFCKTL 126

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 127 TASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHL 186

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS +MH+G+LA
Sbjct: 187 LTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHLGVLA 246

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A+HA +T + F+VF+ PR S SEFV+ + KY++A  H +VSVGMRF+M FE +ES  RR
Sbjct: 247 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KVSVGMRFKMRFEGDESPERR 305

Query: 312 YMGTITGISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
             GTI G+  + P      W+NS WRS++V WDE +A  R  RVS WE+EPL      P 
Sbjct: 306 LSGTIIGLGSM-PANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDATNPQPP 364

Query: 368 LFPLRLKRPWHPSTSSF 384
              LR KR   P+  S 
Sbjct: 365 QPHLRNKRARPPALLSI 381


>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
          Length = 638

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/386 (53%), Positives = 264/386 (68%), Gaps = 21/386 (5%)

Query: 14  EGDNKCLNSE----LWHACAGPLVSLPTVGTRVVYFPQGHSEQ-VAATTNKEVDSHIPNY 68
           E +N C  S     LWHACAGPL SLP  G  VVYFPQGH EQ + A+   E    IP+ 
Sbjct: 9   ESENGCCPSSICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSX 68

Query: 69  PNLPPQLICQLHNVTMHADVETDEVYAQMTL-----QPLSPEEQKDTFVPIELGIP--SK 121
            +LPPQ+ C++ NV +HA+ ETDEVYAQ+TL          E  + + V  E GI    K
Sbjct: 69  -HLPPQVFCRVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHK 127

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
              + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EWKFRH
Sbjct: 128 STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRH 187

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS-SVL 240
           I+RGQP+RHLLTTGWS+FV+ + LV+GD+VLF+  +  +L LGIRRA  P +++P+ SVL
Sbjct: 188 IYRGQPRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVL 247

Query: 241 SSD-SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           S      + +L+AAA+A ++ S F +F+NPRASPSEFVIP  KYV+ + +  V VGMRF+
Sbjct: 248 SGQWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCI-NRPVCVGMRFK 306

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M FE E+++ RR  G ITGI D+DP+RW +S WR + V WDE    E + RVS WEIEP 
Sbjct: 307 MRFEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEP- 365

Query: 360 TTFPMYPSLFPLRLK--RPWHPSTSS 383
           +  P  P+L   RLK  RP  PS ++
Sbjct: 366 SVLP--PALNVPRLKKLRPSLPSGAA 389


>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
          Length = 813

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/362 (53%), Positives = 251/362 (69%), Gaps = 10/362 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLVS+P VG RV YFPQGH EQV A+TN+  +       NLP ++ C++
Sbjct: 20  LYAELWKACAGPLVSVPAVGERVFYFPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKV 79

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTF-----VPIELGIPSKQP-TNYFCKTLTA 133
            NV + A+ +TDEVYAQ+TL P    E   T      VP  +    ++P  + FCKTLTA
Sbjct: 80  MNVELKAEQDTDEVYAQLTLLPEKQNEHASTEGEKEEVPAAVPAVHERPRVHSFCKTLTA 139

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSV RR A++  P LD S  PP QEL+ RDLH VEW+FRHIFRGQPKRHLL 
Sbjct: 140 SDTSTHGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQPKRHLLQ 199

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           +GWSVFVS KRLVA D+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A
Sbjct: 200 SGWSVFVSNKRLVARDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATA 259

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
            HA  T S FTV++ PR SP+EFV+P   Y +++     S+GMRF+M FE EE++ +R+ 
Sbjct: 260 WHAVNTGSMFTVYYKPRTSPAEFVVPCDLYYESMKRNH-SIGMRFKMRFEGEEAAEQRFT 318

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GTI GI D DP  W++S WRS+KV WDE+++  R  RVS W+IEP  + P+  S+ PL+ 
Sbjct: 319 GTIVGIGDSDPSGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPAVS-PL--SVNPLQA 375

Query: 374 KR 375
            R
Sbjct: 376 PR 377



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 6/156 (3%)

Query: 651 PGVSSM--PLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLD 707
           PG S +  PL D    +S     Q   E   N+    Q + TR+  KV+K G ++GRS+D
Sbjct: 661 PGTSKLVSPL-DENQSDSAMAKHQTCPEATRNIQSKLQCS-TRSCKKVHKQGIALGRSVD 718

Query: 708 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 767
           ++RF+ Y+EL  EL +MF   G+ +    + W +V+ D +ND++L+GDDPW  F   V  
Sbjct: 719 LTRFTCYDELIAELDRMFDFGGELKGSCEN-WMVVYTDSDNDMMLVGDDPWNEFCDVVHK 777

Query: 768 IKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGR 803
           I I + E+V KM    + S S  S   +  RG  G+
Sbjct: 778 IFIYTREEVSKMNPGALVSRSEDSLSASLDRGVVGK 813


>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 660

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 253/364 (69%), Gaps = 7/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76

Query: 79  LHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           + N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTS
Sbjct: 77  VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA 
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
            T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI 
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 375
           G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373

Query: 376 PWHP 379
           P  P
Sbjct: 374 PRPP 377



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+V+ D E+D
Sbjct: 537 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDD 595

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 596 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 625


>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 662

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 253/364 (69%), Gaps = 7/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76

Query: 79  LHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           + N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTS
Sbjct: 77  VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA 
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
            T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI 
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 375
           G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373

Query: 376 PWHP 379
           P  P
Sbjct: 374 PRPP 377



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+V+ D E+D
Sbjct: 539 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDD 597

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 598 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 627


>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
 gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
          Length = 787

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 266/376 (70%), Gaps = 8/376 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M  + +G+   G +  +  L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+ 
Sbjct: 1   MDDNGNGIAVSGKDSGD-ALYKELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQA 59

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIP 119
            D  +P Y +LP +++C++ NV + A+ +TDEV+AQ+TL P S  EQ +  V  + L  P
Sbjct: 60  ADEQMPAY-DLPGKILCRVVNVQLKAEPDTDEVFAQITLLPQS--EQDENLVEKKALPAP 116

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++   + FCKTLTASDTSTHGGFSV RR A++  P LD SLQPPAQEL+A+DL   EW+F
Sbjct: 117 TRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLLGNEWRF 176

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHIFRGQP+RHLL +GWS+FVSAK+LVAGD+ +F+  E  +L +G+RRA+R    +PSS 
Sbjct: 177 RHIFRGQPRRHLLQSGWSLFVSAKKLVAGDAFIFLRGETGELRVGVRRAMRQSCNVPSSF 236

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SS SMHIG+LA A HA +T + FTV++ PR SP+EF+IP+ KY+++V     ++GMRF+
Sbjct: 237 MSSHSMHIGILATAWHAVSTGTMFTVYYKPRTSPAEFIIPMDKYMESV-KNNFTIGMRFK 295

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M FE EE+  +R++GT+ G+   DP RW  S WR +KV WDE+++  R  RVS WE+EP 
Sbjct: 296 MRFEAEEAPEQRFLGTVIGVEHADPKRWPTSRWRCLKVRWDETSSLHRPDRVSPWEVEPA 355

Query: 360 TTFPMYPSLFPLRLKR 375
              P+ P L   RLKR
Sbjct: 356 LA-PLDP-LPTCRLKR 369



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 60/92 (65%), Gaps = 2/92 (2%)

Query: 694 VKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
           VKV+K G +VGR +D+++F+ YNEL  EL ++F   G+     ++ W + F D E D++L
Sbjct: 677 VKVHKQGIAVGRYVDLTKFNGYNELIAELDRIFEFSGELITSNKN-WLIAFTDDEGDMML 735

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           +GDDPWE F S V  I + + E++ +M ++ +
Sbjct: 736 VGDDPWEEFCSMVRRIFVYTREEINRMNQRSL 767


>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 665

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 254/364 (69%), Gaps = 7/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L +ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 18  ALCTELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76

Query: 79  LHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           + N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTS
Sbjct: 77  VINIQRRAEPETDEVYAQITLLPELDQNEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWS 194

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA 
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
            T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI 
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 375
           G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373

Query: 376 PWHP 379
           P  P
Sbjct: 374 PRPP 377



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+     +  WQ+V+ D E+D
Sbjct: 542 RSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFEIKGELLKSTKK-WQVVYTDDEDD 600

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 601 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630


>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
 gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
 gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
 gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 665

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 253/364 (69%), Gaps = 7/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76

Query: 79  LHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           + N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTS
Sbjct: 77  VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA 
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
            T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI 
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 375
           G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373

Query: 376 PWHP 379
           P  P
Sbjct: 374 PRPP 377



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+V+ D E+D
Sbjct: 542 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDD 600

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 601 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630


>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
 gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 812

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/379 (51%), Positives = 256/379 (67%), Gaps = 9/379 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M  +   L  Q        L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+ 
Sbjct: 1   MPPAAMALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQV 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--I 118
             + +  Y +LP +L+C++ NV + A+ +TDEVYAQ+ L P  PE+          G   
Sbjct: 61  AGNPMRLY-DLPSKLLCRVLNVELKAETDTDEVYAQIMLMP-EPEQNDVAAEKTSSGSAA 118

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           P +     FCKTLTASDTSTHGGFSV RR A++  P+LD S  PP QEL+A+DLH +EW+
Sbjct: 119 PPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWR 178

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSS
Sbjct: 179 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSS 238

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           V+SS SMH+G+LA A HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRF
Sbjct: 239 VISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRF 297

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RM FE EE+  +R+ GTI G  +LDP+ W +S WR +KV WDE +   R  +VS W+IEP
Sbjct: 298 RMRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 356

Query: 359 LTTFPMYPSLFPL-RLKRP 376
            ++ P+ P   PL R KRP
Sbjct: 357 ASSPPVNP--LPLSRGKRP 373



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 8/100 (8%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+S+F+ Y EL+ EL +MF  EG+     R+ WQ+V+ D E 
Sbjct: 691 TRSCTKVHKQGVALGRSVDLSKFTDYGELKAELDKMFEFEGELVSANRN-WQIVYTDNEG 749

Query: 749 DVLLLGDDPWE------AFVSNVWYIKILSPEDVQKMGEQ 782
           D++L+GDDPW+       F + V  I I + E+VQKM  +
Sbjct: 750 DMMLVGDDPWDPLLTSREFCNIVRKIYIYTKEEVQKMNSK 789


>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
 gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 806

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/379 (51%), Positives = 256/379 (67%), Gaps = 9/379 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M  +   L  Q        L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+ 
Sbjct: 1   MPPAAMALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQV 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--I 118
             + +  Y +LP +L+C++ NV + A+ +TDEVYAQ+ L P  PE+          G   
Sbjct: 61  AGNPMRLY-DLPSKLLCRVLNVELKAETDTDEVYAQIMLMP-EPEQNDVAAEKTSSGSAA 118

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           P +     FCKTLTASDTSTHGGFSV RR A++  P+LD S  PP QEL+A+DLH +EW+
Sbjct: 119 PPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWR 178

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSS
Sbjct: 179 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSS 238

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           V+SS SMH+G+LA A HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRF
Sbjct: 239 VISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRF 297

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RM FE EE+  +R+ GTI G  +LDP+ W +S WR +KV WDE +   R  +VS W+IEP
Sbjct: 298 RMRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 356

Query: 359 LTTFPMYPSLFPL-RLKRP 376
            ++ P+ P   PL R KRP
Sbjct: 357 ASSPPVNP--LPLSRGKRP 373



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+S+F+ Y EL+ EL +MF  EG+     R+ WQ+V+ D E 
Sbjct: 691 TRSCTKVHKQGVALGRSVDLSKFTDYGELKAELDKMFEFEGELVSANRN-WQIVYTDNEG 749

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           D++L+GDDPWE F + V  I I + E+VQKM  +
Sbjct: 750 DMMLVGDDPWEEFCNIVRKIYIYTKEEVQKMNSK 783


>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
 gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
          Length = 704

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/373 (51%), Positives = 251/373 (67%), Gaps = 8/373 (2%)

Query: 7   GLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP 66
            L  Q        L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + + 
Sbjct: 8   ALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMR 67

Query: 67  NYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP--- 123
            Y +LP +L+C++ NV + A+ +TDEVYAQ+ L P    EQ D          +  P   
Sbjct: 68  LY-DLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEP--EQTDVAAEKASSASAASPRPA 124

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
              FCKTLTASDTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIF
Sbjct: 125 VRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIF 184

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS 
Sbjct: 185 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQ 244

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           SMH+G+LA A HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE
Sbjct: 245 SMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFE 303

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            EE+  +R+ GTI G  +LDP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P
Sbjct: 304 GEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPP 362

Query: 364 MYPSLFPLRLKRP 376
           + P     R+KRP
Sbjct: 363 VNPLPLSSRVKRP 375


>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
 gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/365 (53%), Positives = 255/365 (69%), Gaps = 7/365 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV-AATT 57
           M L  S     G      C  L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TT
Sbjct: 1   MALVASNYPSGGPHAGAPCDALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTT 60

Query: 58  NKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG 117
           ++ +D  +P++ NLP +++C++ +V + A+ ETDEVYAQ+TL P  P++ + T     L 
Sbjct: 61  HQGLDQQMPSF-NLPSKILCKVVHVQLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLP 118

Query: 118 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
            P +   + FCKTLTASDTSTHGGFSV RR A+   P LD S QPP QEL+A DLH  EW
Sbjct: 119 EPQRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEW 178

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS 237
            FRHIFRGQP+RHLLTTGWSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  + MPS
Sbjct: 179 HFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLSNMPS 238

Query: 238 SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
           SV+SS SMH+G+LA A+HA +T + F+VF+ PR S SEF++ L KY++A  H ++SVGMR
Sbjct: 239 SVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSLNKYLEARNH-KLSVGMR 297

Query: 298 FRMLFETEESSVRRYMGTITGISDLDPVR-WSNSHWRSVKVGWDESTAGERQPRVSLWEI 356
           F+M FE EE   RR+ GTI G+ D +    W++S WRS+KV WDE  +  R  RVS WE+
Sbjct: 298 FKMRFEGEEVPERRFSGTIVGVGDKNTSSGWADSEWRSLKVQWDEPASIFRPERVSAWEL 357

Query: 357 EPLTT 361
           EPL  
Sbjct: 358 EPLVA 362



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF  Y +L ++L +MF I+G+    L S WQ+V+ D E+D
Sbjct: 553 RSCTKVHMQGIAVGRAVDLTRFDRYEDLLKKLEEMFDIQGELCG-LTSIWQVVYTDDEDD 611

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 612 MMMVGDDPWLEFCSMVRKIFIYTAEEVKRL 641


>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
 gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
          Length = 839

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/365 (51%), Positives = 251/365 (68%), Gaps = 15/365 (4%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELW ACAGPL S+P +G +V YFPQGH EQV A+TN+  +       NLP ++ C+L N+
Sbjct: 30  ELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIPCKLMNI 89

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-----PSKQPTN------YFCKTL 131
            + A+ +TDEVYAQ+TL P   +++  +             P   PTN       FCKTL
Sbjct: 90  ELKAEPDTDEVYAQLTLLPDKKQDENTSTTVENEEAEEEVVPHAPPTNEGPRIHSFCKTL 149

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH +EW+FRHIFRGQP+RHL
Sbjct: 150 TASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQPRRHL 209

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA
Sbjct: 210 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVLA 269

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A HA  T S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE EE++ +R
Sbjct: 270 TAWHAVNTGSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGEEAAEQR 328

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFP 370
           + GTI GI   DP  W++S WRS+KV WDE+++  R  RVS W+IEP ++  P+ P   P
Sbjct: 329 FTGTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAISPSPVNP--LP 386

Query: 371 LRLKR 375
           +R KR
Sbjct: 387 VRFKR 391



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 3/157 (1%)

Query: 650 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDI 708
           DP  +  P  D    +S+    Q   E   N+    Q + TR+  KV+K GS +GRS+D+
Sbjct: 670 DPSKTVKPF-DGPQSDSITENNQPCPEATQNIQNKVQSSSTRSCKKVHKQGSALGRSIDL 728

Query: 709 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 768
           ++F+ Y+EL  EL QMF  +G+ ++P ++ W +V+ D E D++L+GDDPW  F   V  I
Sbjct: 729 TKFTCYDELIAELDQMFDFDGELKNPCKN-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKI 787

Query: 769 KILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDP 805
            I + E+V++M    + S S  S   +  RG   ++P
Sbjct: 788 FIYTREEVERMNPGALNSRSEDSLSDSQGRGLASKEP 824


>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
          Length = 817

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/384 (49%), Positives = 262/384 (68%), Gaps = 12/384 (3%)

Query: 7   GLCQQ----GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD 62
           GLC      G  G    + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  +
Sbjct: 55  GLCCSLLLAGGGGTEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAE 114

Query: 63  SHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS-- 120
            H+  Y +LP +++C++ NV + A+ + DEVYAQ+TL P S  E+  +   +    P+  
Sbjct: 115 QHMQFY-DLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAAL 173

Query: 121 -KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
            +   + FCKTLTASDTSTHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+F
Sbjct: 174 ARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRF 233

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHIFRGQP+RHLL +GWSVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV
Sbjct: 234 RHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSV 293

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SS SMH+G+LA A HA  T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+
Sbjct: 294 ISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFK 352

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M FE EE+  +R+ GTI G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP 
Sbjct: 353 MRFEGEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPA 412

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSS 383
            +    P + PL + RP  P +++
Sbjct: 413 VS---PPPINPLPVHRPKRPRSNA 433



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 2/71 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 748 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 806

Query: 749 DVLLLGDDPWE 759
           D++L+GDDPW+
Sbjct: 807 DMMLVGDDPWK 817


>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
          Length = 801

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/373 (52%), Positives = 254/373 (68%), Gaps = 9/373 (2%)

Query: 7   GLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP 66
            L  Q        L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + + 
Sbjct: 2   ALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMR 61

Query: 67  NYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPT 124
            Y +LP +L+C++ NV + A+ +TDEVYAQ+ L P  PE+          G   P +   
Sbjct: 62  LY-DLPSKLLCRVLNVELKAETDTDEVYAQIMLMP-EPEQNDVAAEKTSSGSAAPPRPAV 119

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
             FCKTLTASDTSTHGGFSV RR A++  P+LD S  PP QEL+A+DLH +EW+FRHIFR
Sbjct: 120 RSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFR 179

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS S
Sbjct: 180 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQS 239

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           MH+G+LA A HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE 
Sbjct: 240 MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEG 298

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
           EE+  +R+ GTI G  +LDP+ W +S WR +KV WDE +   R  +VS W+IEP ++ P+
Sbjct: 299 EEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPV 357

Query: 365 YPSLFPL-RLKRP 376
            P   PL R KRP
Sbjct: 358 NP--LPLSRGKRP 368



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+S+F+ Y EL+ EL +MF  EG+     R+ WQ+V+ D E 
Sbjct: 686 TRSCTKVHKQGVALGRSVDLSKFTDYGELKAELDKMFEFEGELVSANRN-WQIVYTDNEG 744

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           D++L+GDDPWE F + V  I I + E+VQKM  +
Sbjct: 745 DMMLVGDDPWEEFCNIVRKIYIYTKEEVQKMNSK 778


>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 728

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/379 (51%), Positives = 256/379 (67%), Gaps = 9/379 (2%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M  +   L  Q        L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+ 
Sbjct: 1   MPPAAMALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQV 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--I 118
             + +  Y +LP +L+C++ NV + A+ +TDEVYAQ+ L P  PE+          G   
Sbjct: 61  AGNPMRLY-DLPSKLLCRVLNVELKAETDTDEVYAQIMLMP-EPEQNDVAAEKTSSGSAA 118

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           P +     FCKTLTASDTSTHGGFSV RR A++  P+LD S  PP QEL+A+DLH +EW+
Sbjct: 119 PPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWR 178

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSS
Sbjct: 179 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSS 238

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           V+SS SMH+G+LA A HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRF
Sbjct: 239 VISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRF 297

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RM FE EE+  +R+ GTI G  +LDP+ W +S WR +KV WDE +   R  +VS W+IEP
Sbjct: 298 RMRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 356

Query: 359 LTTFPMYPSLFPL-RLKRP 376
            ++ P+ P   PL R KRP
Sbjct: 357 ASSPPVNP--LPLSRGKRP 373


>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
          Length = 665

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/366 (52%), Positives = 256/366 (69%), Gaps = 14/366 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C++
Sbjct: 19  LCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 77

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP----TNYFCKTLTASD 135
            N+   A+ ETDEVYAQ+TL P     + D   P+    P ++P     + FCKTLTASD
Sbjct: 78  INIQRRAEPETDEVYAQITLLP-----EADQSEPMSPDAPVQEPEKCTVHSFCKTLTASD 132

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTG 192

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAH
Sbjct: 193 WSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAH 252

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           A  T + F+VF+ PR S SEF++ + +Y++A  + +++VGMRF+M FE EE+  +R+ GT
Sbjct: 253 AITTGTIFSVFYKPRTSRSEFIVSVNRYLEAK-NQKLAVGMRFKMRFEGEEAPEKRFSGT 311

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS--LFPLRL 373
           I G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL      PS  L P R 
Sbjct: 312 IVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVAN-NTPSAHLPPQRN 370

Query: 374 KRPWHP 379
           KRP  P
Sbjct: 371 KRPRPP 376



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 683 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q    R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+
Sbjct: 534 QKSQSRQIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQV 592

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           V+ D E+D++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 593 VYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630


>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
 gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 841

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/366 (52%), Positives = 248/366 (67%), Gaps = 15/366 (4%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELW ACAGPLV++P VG RV Y PQGH EQV A+TN+  +       NLP ++ C++ NV
Sbjct: 32  ELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNV 91

Query: 83  TMHADVETDEVYAQMTLQPLSPEE---------QKDTFVPIELGIPS---KQPTNYFCKT 130
            + A+ +TDEVYAQ+TL P   ++          KD     E+  P+   +   + FCKT
Sbjct: 92  ELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKT 151

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RH
Sbjct: 152 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRH 211

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+L
Sbjct: 212 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVL 271

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A A HA  T + FTV++ PR SPSEFV+P   Y K       S+GMRF+M FE EE++ +
Sbjct: 272 ATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLY-KESLKRNHSIGMRFKMTFEGEEAAEQ 330

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLF 369
           R+ GTI G+ D DP  W++S WRS+KV WDE+ +  R  RVS W+IEP  +  P+ P   
Sbjct: 331 RFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPA 390

Query: 370 PLRLKR 375
           P R KR
Sbjct: 391 P-RTKR 395



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 625 VVFGVHIDSSG---LLLPTTVSSFTTSV-----------DPGVSSMPLGDSGFHNSMYGC 670
           ++FG+ +DS     LL+     +F   +           DP  +  PL D   H+S    
Sbjct: 634 MLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPL-DGAQHDSAREK 692

Query: 671 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 729
            Q   +   N+    Q   +R+  KV+K G ++GRS+D+++F+ Y+EL  EL QMF   G
Sbjct: 693 HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNG 752

Query: 730 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSP 789
           +     ++ W +V+ D E D++L+GDDPW  F + V  I I + E+VQKM    + S S 
Sbjct: 753 ELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSE 811

Query: 790 SSGQRANSRGNCGRDPVGSL 809
            S   +  RG  G    G L
Sbjct: 812 DSRSTSVERGLVGEGLQGGL 831


>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
          Length = 849

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/367 (50%), Positives = 257/367 (70%), Gaps = 8/367 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  + H+  Y +LP +++C++
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS---KQPTNYFCKTLTASDT 136
            NV + A+ + DEVYAQ+TL P S  E+  +   +    P+   +   + FCKTLTASDT
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDT 157

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL +GW
Sbjct: 158 STHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGW 217

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA
Sbjct: 218 SVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHA 277

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+M FE EE+  +R+ GTI
Sbjct: 278 VNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFKMRFEGEEAPEQRFTGTI 336

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP  +    P + PL + RP
Sbjct: 337 VGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS---PPPINPLPVHRP 393

Query: 377 WHPSTSS 383
             P +++
Sbjct: 394 KRPRSNA 400



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 715 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 773

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
           D++L+GDDPW  F S V  I + + E+VQ+M    + S    SG
Sbjct: 774 DMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSRPEDSG 817


>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
          Length = 640

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/367 (52%), Positives = 254/367 (69%), Gaps = 5/367 (1%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV++P    RV YFPQGH EQ+ A+ ++ +D  +P++ NLP +++
Sbjct: 16  NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPSKIL 74

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P     + FCKTLTASDT
Sbjct: 75  CKVVNVHLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDT 133

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 134 STHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 193

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRL AGD+ +F+  E  +L +G+RR +R    +P SV+SS SMH+G+LA A+HA
Sbjct: 194 SVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHA 253

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T + F+VF+ P  SPSEF++ + KY++A  H +VSVGMRF+M FE +E+  RR+ GTI
Sbjct: 254 ITTGTLFSVFYKP--SPSEFIVSVNKYLEARNH-KVSVGMRFKMRFEGDEAPERRFSGTI 310

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL T     +    R KRP
Sbjct: 311 VGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQPMQRSKRP 370

Query: 377 WHPSTSS 383
             P  SS
Sbjct: 371 RSPVLSS 377



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D+++FSSY EL  +L +MF I+G+   P +  WQ+V+ D E+D
Sbjct: 516 RSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKK-WQVVYTDDEDD 574

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 575 MMMVGDDPWHEFCSMVRKIFIYTVEEVKEL 604


>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
 gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
 gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 840

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/365 (52%), Positives = 247/365 (67%), Gaps = 14/365 (3%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELW ACAGPLV++P VG RV Y PQGH EQV A+TN+  +       NLP ++ C++ NV
Sbjct: 32  ELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNV 91

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQ--------KDTFVPIELGIPS---KQPTNYFCKTL 131
            + A+ +TDEVYAQ+TL P   +          KD     E+  P+   +   + FCKTL
Sbjct: 92  ELKAEPDTDEVYAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTL 151

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RHL
Sbjct: 152 TASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 211

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA
Sbjct: 212 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLA 271

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A HA  T + FTV++ PR SPSEFV+P   Y K       S+GMRF+M FE EE++ +R
Sbjct: 272 TAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLY-KESLKRNHSIGMRFKMTFEGEEAAEQR 330

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFP 370
           + GTI G+ D DP  W++S WRS+KV WDE+ +  R  RVS W+IEP  +  P+ P   P
Sbjct: 331 FTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAP 390

Query: 371 LRLKR 375
            R KR
Sbjct: 391 -RTKR 394



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 625 VVFGVHIDSSG---LLLPTTVSSFTTSV-----------DPGVSSMPLGDSGFHNSMYGC 670
           ++FG+ +DS     LL+     +F   +           DP  +  PL D   H+S    
Sbjct: 633 MLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPL-DGAQHDSAREK 691

Query: 671 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 729
            Q   +   N+    Q   +R+  KV+K G ++GRS+D+++F+ Y+EL  EL QMF   G
Sbjct: 692 HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNG 751

Query: 730 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSP 789
           +     ++ W +V+ D E D++L+GDDPW  F + V  I I + E+VQKM    + S S 
Sbjct: 752 ELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSE 810

Query: 790 SSGQRANSRGNCGRDPVGSL 809
            S   +  RG  G    G L
Sbjct: 811 DSRSTSVERGLVGEGLQGGL 830


>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 662

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 252/364 (69%), Gaps = 7/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76

Query: 79  LHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           + N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTS
Sbjct: 77  VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           T GGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 TQGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA 
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
            T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI 
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 375
           G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373

Query: 376 PWHP 379
           P  P
Sbjct: 374 PRPP 377



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+V+ D E+D
Sbjct: 539 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDD 597

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 598 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 627


>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
          Length = 681

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/364 (53%), Positives = 250/364 (68%), Gaps = 6/364 (1%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLVSLP  G RV YFPQGH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 26  ALYRELWHACAGPLVSLPREGERVYYFPQGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 84

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV   A+ ETDEVYAQ+TL P  P+  + T        P K   + FCKTLTASDTST
Sbjct: 85  VVNVQRRAEPETDEVYAQITLLP-EPDPNEVTSPDPPPPEPEKCTVHSFCKTLTASDTST 143

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A+   P LD S QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 144 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 203

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+K+LVAGD+ +F+  E  +L +G+RR +R  T MPSSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSSKKLVAGDAFIFLRGETGELRVGVRRHMRQQTNMPSSVISSHSMHLGVLATASHAIA 263

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F++F+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE     + G I G
Sbjct: 264 TGTLFSIFYKPRTSRSEFIVSVNKYLEARKH-KLSVGMRFKMRFEGEEVPDEGFSGIIVG 322

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL---TTFPMYPSLFPLRLKR 375
           + D     W NS WRS+KV WDE ++  R  RVS WE+EPL   TT P  P+  P +  +
Sbjct: 323 VEDNKTSAWPNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPPPNSQPAQRNK 382

Query: 376 PWHP 379
              P
Sbjct: 383 RARP 386



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF  Y++L + L +MF I G+     +  WQ+V+ D E+D
Sbjct: 557 RSCTKVHMQGIAVGRAVDLTRFDRYDDLLKRLEEMFDIGGELSGATKK-WQVVYTDDEDD 615

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 616 MMMVGDDPWHEFCSMVRKIFIYTAEEVKRL 645


>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
 gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
          Length = 850

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/371 (50%), Positives = 257/371 (69%), Gaps = 15/371 (4%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  + H+  Y +LP +++C++
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 80  HNVTMHADVETDEVYAQMTLQPLS--PEEQKDT-----FVPIELGIPSKQPTNYFCKTLT 132
            NV + A+ + DEVYAQ+TL P S  PEE   +       P  L  P     + FCKTLT
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKQPEENGSSEEMPASPPAALARPR---VHSFCKTLT 154

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL
Sbjct: 155 ASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLL 214

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
            +GWSVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV+SS SMH+G+LA 
Sbjct: 215 QSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLAT 274

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           A HA  T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+M FE EE+  +R+
Sbjct: 275 AWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFKMRFEGEEAPEQRF 333

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
            GTI G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP  +    P + PL 
Sbjct: 334 TGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS---PPPINPLP 390

Query: 373 LKRPWHPSTSS 383
           + RP  P +++
Sbjct: 391 VHRPKRPRSNA 401



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 716 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 774

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
           D++L+GDDPW  F S V  I + + E+VQ+M    + S    SG
Sbjct: 775 DMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSRPEDSG 818


>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
          Length = 751

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/367 (50%), Positives = 257/367 (70%), Gaps = 8/367 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  + H+  Y +LP +++C++
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS---KQPTNYFCKTLTASDT 136
            NV + A+ + DEVYAQ+TL P S  E+  +   +    P+   +   + FCKTLTASDT
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDT 157

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL +GW
Sbjct: 158 STHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGW 217

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA
Sbjct: 218 SVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHA 277

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+M FE EE+  +R+ GTI
Sbjct: 278 VNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFKMRFEGEEAPEQRFTGTI 336

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP  +    P + PL + RP
Sbjct: 337 VGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS---PPPINPLPVHRP 393

Query: 377 WHPSTSS 383
             P +++
Sbjct: 394 KRPRSNA 400


>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 398

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/364 (53%), Positives = 246/364 (67%), Gaps = 18/364 (4%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L+ ELWHACAGPL  LP V + V+Y+PQGH EQV A    +V      + NLP  L+C++
Sbjct: 4   LDCELWHACAGPLTQLPPVDSHVMYWPQGHIEQVCAA---DVYQASKQFSNLPAHLLCKI 60

Query: 80  HNVTMHADVETDEVYAQMTLQPLSP----EEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
             + + AD  TDEV+AQM L P       +E KD   P       ++    FCKTLTASD
Sbjct: 61  SKIELQADPHTDEVFAQMDLTPQYETEFTKEMKDAPPPT-----MQKNVRSFCKTLTASD 115

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSVPRRAAE   P LD S+ PP QEL+A+DLH  EW FRHI+RG P+RHLLTTG
Sbjct: 116 TSTHGGFSVPRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLLTTG 175

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVS KRLVAGD+V+F+  E  QL +G+RRA +      S+  S+ ++H+G+LAAA+H
Sbjct: 176 WSVFVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLAAASH 235

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           AA     F+V +NPR SPSEFVIP  KY+K      ++VG RF+M FE++ES+ RRY GT
Sbjct: 236 AATERLRFSVIYNPRTSPSEFVIPYHKYLKTK-ENNLTVGSRFKMKFESDESTERRYSGT 294

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE---PLTTFPMYPSLFPLR 372
           I  +SD DP++W NS WRS+KV WDES A ER  RVS WEIE   P++T P  PS+ P  
Sbjct: 295 IVEVSDADPLKWPNSAWRSMKVEWDES-ASERHERVSPWEIEPFVPISTLPT-PSVGPRP 352

Query: 373 LKRP 376
            +RP
Sbjct: 353 KRRP 356


>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
          Length = 693

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/363 (52%), Positives = 255/363 (70%), Gaps = 15/363 (4%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPL+++P  G RV YFPQGH EQ+ A+TN+++D ++P + NLP +++C +
Sbjct: 71  LFHELWHACAGPLITVPRQGERVYYFPQGHIEQLEASTNQQLDQYLPMF-NLPSKILCSV 129

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP---IELGIPSKQPTNYFCKTLTASDT 136
            NV +  + ++DEVYAQ+ LQP   + +  +  P   +E G       + FCKTLTASDT
Sbjct: 130 VNVELRTEADSDEVYAQIMLQPQDEQSELTSAGPPQELERGT-----IHSFCKTLTASDT 184

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 185 STHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQPRRHLLTTGW 244

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           SVFVS+KRLVAGD+ +F+     +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA
Sbjct: 245 SVFVSSKRLVAGDAFIFLRGGNGELRVGVRRHMRQVNNMPSSVISSHSMHLGVLATASHA 304

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
            +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +E+  RR+ GTI
Sbjct: 305 ISTGTLFSVFYKPRTSRSEFVVSVNKYLEAK-KQNMSVGMRFKMKFEGDEALERRFSGTI 363

Query: 317 TGISD---LDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL-TTFPMYPSLFPLR 372
            G+     +   +W++S W+S+KV WDE ++  R  RVSLWE+EPL +  P  P   PLR
Sbjct: 364 VGMGSTPTMPSSQWADSDWKSLKVQWDEPSSILRPDRVSLWELEPLDSANPQTPEP-PLR 422

Query: 373 LKR 375
            KR
Sbjct: 423 NKR 425



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV   G +VGR++D++R   Y +L  +L +MF I G+    L+  WQ+V+ D E+
Sbjct: 582 VRSCTKVIMKGMAVGRAVDLARLDGYGDLHRKLEEMFDIHGELCSTLKR-WQVVYADDED 640

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           D++L+GDDPW+ F   V  I I S E+ +++  + 
Sbjct: 641 DMMLVGDDPWDEFCGMVKRIYIYSYEEAKQLAPKA 675


>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
          Length = 808

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/379 (51%), Positives = 248/379 (65%), Gaps = 20/379 (5%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN-KEVDSHIPNYPNLPPQLICQLHN 81
           ELW+ACAGPL  LP  G  VVYFPQGH E+ A+++    +   +P +  L PQ+ C++ +
Sbjct: 61  ELWYACAGPLTCLPKKGNVVVYFPQGHMEEAASSSPFSPMKMDLPTF-GLHPQIFCRVDD 119

Query: 82  VTMHADVETDEVYAQMTLQPLSPE---------EQKDTFVPIEL-GI-PSKQPTNYFCKT 130
           V + A+ E DEVY Q++L PL PE         E +D  +  E  G+ P K  ++ FCKT
Sbjct: 120 VQLLANKENDEVYTQLSLLPL-PESVAISLEGKEHEDFGIDEERNGVNPGKSASHMFCKT 178

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QELIA+DLH VEWKFRHI+RGQP+RH
Sbjct: 179 LTASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 238

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS+FVS K LV+GD+VLF+  E   L LGIRRA RP   +P S++ S      +L
Sbjct: 239 LLTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNALPESIIKSQYSGSDVL 298

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           +A A A +T S F VF++PRAS ++FV+P  KYVK++  TR+ VG RF+M F+ ++S  R
Sbjct: 299 SAVASAVSTKSAFNVFYSPRASHADFVVPYQKYVKSI-KTRIPVGTRFKMRFDLDDSPER 357

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-----MY 365
           RY G +TGISD+DP RW NS WR + V WDE      Q RVS WEI+   + P       
Sbjct: 358 RYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEIDSSVSLPPLSIQSS 417

Query: 366 PSLFPLRLKRPWHPSTSSF 384
           P L  LR  +   P  S F
Sbjct: 418 PRLKKLRTSQQAQPVDSHF 436



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 2/111 (1%)

Query: 686 QLTPTRTFVKVYKS-GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R+  KV+K  G +GR  D+S  + + +L  EL ++  IE    DP + GW++++ 
Sbjct: 675 QSSGKRSCTKVHKQRGLIGRPFDLSGLNGHADLLVELERLLNIEDLLSDP-KKGWRILYT 733

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRA 795
           D +ND++++G DPW  F   V  I I + E+V+KM  +G+   + S  + A
Sbjct: 734 DSDNDLMVVGGDPWHEFCEVVSKIHIYTQEEVEKMTIEGISDDTQSCLEEA 784


>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/405 (48%), Positives = 267/405 (65%), Gaps = 10/405 (2%)

Query: 7   GLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP 66
           G  + G E D+  L +ELW ACAGPLV +P    RV YFPQGH EQ+ A+TN+ VD  IP
Sbjct: 9   GGLEPGLESDH--LFTELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIP 66

Query: 67  NYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY 126
            + NLP +++C++ +  + A+ ETDEVYAQ+TLQP + + +  +        P KQ  + 
Sbjct: 67  LF-NLPSKILCRVVHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAP-KQTVHS 124

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           FCK LTASDTSTHGGFSV R+ A +  P LD S   P QEL+ARDLH  EW+F+HIFRGQ
Sbjct: 125 FCKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQ 184

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 246
           P+RHLLTTGWS FV++KRLVAGD+ +F+  +  +L +G+RR  R  + MPSSV+SS SMH
Sbjct: 185 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMH 244

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
           +G+LA A+HA  T + F V++ PR   S+F+I L KY++AV +   +VGMRF+M FE E+
Sbjct: 245 LGVLATASHAVTTQTLFVVYYKPRT--SQFIISLNKYLEAVNYG-FAVGMRFKMRFEGED 301

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMY 365
           S  RR+ GTI GI D+ P +WSNS WRS+K+ WDE    +R  RVS W+IEP + +  + 
Sbjct: 302 SPERRFTGTIVGIGDISP-QWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLN 360

Query: 366 PSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTL 410
            +  P+++KRP  P      +N   +     W  G +    LT L
Sbjct: 361 LTQPPVKIKRP-RPLDLPVAENTSSSVPSPFWYAGSSPSHELTQL 404



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           TRT     +  +VGR++D++    Y+EL  EL +MF I+G+     R+ W++VF D E D
Sbjct: 492 TRTKKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKGELCP--RNKWEVVFTDDEGD 549

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW+ F   V  I I S E+V+KM
Sbjct: 550 MMLVGDDPWQEFCKMVRKIFIYSSEEVKKM 579


>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 693

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/354 (51%), Positives = 249/354 (70%), Gaps = 8/354 (2%)

Query: 7   GLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP 66
           G  ++G EG++  L  ELW ACAGPLV +P  G RV YFPQGH EQ+  +TN+E++  IP
Sbjct: 9   GESRKGLEGED--LYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIP 66

Query: 67  NYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY 126
           ++ +LPP+++C++ N+ + A+ ETDEVYAQ+TL P + + +  +  P E    ++Q  + 
Sbjct: 67  HF-DLPPKILCRVVNIRLLAEKETDEVYAQITLYPEADQSEPQSADP-EPPERTRQTVHS 124

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           FCK LTASDTSTHGGFSV R+ A +  P LD S   P QEL A+DLH  EWKF+HIFRGQ
Sbjct: 125 FCKILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQ 184

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 246
           P+RHLLTTGWS FV++KRLVAGD+ +F+  +  +L +G+RR  R  ++MPSSV+SS SMH
Sbjct: 185 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMH 244

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
           +G+LA A+HA  T + F V++ PR   S+F+I L KY++ V      VGMRF+M FE EE
Sbjct: 245 LGVLATASHAVRTQTYFVVYYKPRT--SQFIISLNKYLETV-KNGYEVGMRFKMRFEGEE 301

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           S  RR+ GTI G+ D+ P +WS+S WRS+K+ WDE    +R  RVS WEIEP  
Sbjct: 302 SPERRFTGTIVGVGDMSP-QWSDSKWRSLKIQWDEPATIQRPERVSPWEIEPFV 354



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 24/186 (12%)

Query: 609 DAAVGTENCNTDSQN--SVVFGVHIDSSGLLL-------PTTVSSFTTSVDPGVSSMPLG 659
           D ++G      D +N  S+V  +   SS L++       P   +  T  VD G  S P  
Sbjct: 500 DISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSK 559

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLT--PTRTFVKVYKSG-SVGRSLDISRFSSYNE 716
           +           Q S+ELL    Q   ++   +RT  KV   G +VGR++D++    Y +
Sbjct: 560 E----------QQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYED 609

Query: 717 LREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           L +EL  +F I+G+      + W +VF D END++L+GDDPW  F   V  I I S E+V
Sbjct: 610 LIDELENVFEIKGELRG--INKWSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEV 667

Query: 777 QKMGEQ 782
           +KM  +
Sbjct: 668 KKMSRE 673


>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 674

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 190/361 (52%), Positives = 251/361 (69%), Gaps = 6/361 (1%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+  + ++  +P++ NLP +++
Sbjct: 16  NDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMYEGLEQQMPSF-NLPSKIL 74

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASD 135
           C++ NV + A+ ETDEVYAQ+TL P +  +Q +   P + L    +   + FCKTLTASD
Sbjct: 75  CKVVNVHLRAEPETDEVYAQITLLPEA--DQSEVTSPDDPLPESPRVKIHSFCKTLTASD 132

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSV RR A+   P LD S QPP QEL+A DLH  EW FRHIFRGQPKRHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPKRHLLTTG 192

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WSVFVS+K+L AGD+ +F+  E  +L +G+RR +R  + +PSSV+SS SMH+G+LA A+H
Sbjct: 193 WSVFVSSKKLAAGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVISSHSMHLGVLATASH 252

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           A AT + F+VF+ PR S SEF++ + KY++   H ++SVGMRF+M FE +E   RR+ GT
Sbjct: 253 AIATGTLFSVFYKPRTSRSEFIVSVNKYLEVQSH-KLSVGMRFKMRFEGDEIPERRFSGT 311

Query: 316 ITGISDLDPVR-WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
           I G+ D      W +S WRS+KV WDE ++  R  RVS WE+EPL +  +  S    R K
Sbjct: 312 IVGVGDNKSSSVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLVSTTLANSQPTQRNK 371

Query: 375 R 375
           R
Sbjct: 372 R 372



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 2/98 (2%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q    R+  KV+  G +VGR++D++RF  Y +L  +L  MF I+ +    L+  WQ+
Sbjct: 542 QESQSKQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEDMFNIKTELCGSLKK-WQV 600

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           V+ D E+D++++GDDPW+ F S V  I I + E+V+K+
Sbjct: 601 VYTDNEDDMMMVGDDPWDEFCSVVRKIFIYTAEEVKKL 638


>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 764

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 192/395 (48%), Positives = 264/395 (66%), Gaps = 8/395 (2%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           ++ ++S+LW ACAGPLV +P    RV YFPQGH EQ+ A+TN+ VD  IP + NLP +++
Sbjct: 80  SEAVSSQLWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLF-NLPSKIL 138

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ +  + A+ ETDEVYAQ+TLQP + + +  +        P KQ  + FCK LTASDT
Sbjct: 139 CRVVHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAP-KQTVHSFCKILTASDT 197

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           STHGGFSV R+ A +  P LD S   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGW
Sbjct: 198 STHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGW 257

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           S FV++KRLVAGD+ +F+  +  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA
Sbjct: 258 STFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHA 317

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
             T + F V++ PR   S+F+I L KY++AV +   +VGMRF+M FE E+S  RR+ GTI
Sbjct: 318 VTTQTLFVVYYKPRT--SQFIISLNKYLEAVNYG-FAVGMRFKMRFEGEDSPERRFTGTI 374

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 375
            GI D+ P +WSNS WRS+K+ WDE    +R  RVS W+IEP + +  +  +  P+++KR
Sbjct: 375 VGIGDISP-QWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPPVKIKR 433

Query: 376 PWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTL 410
           P  P      +N   +     W  G +    LT L
Sbjct: 434 P-RPLDLPVAENTSSSVPSPFWYAGSSPSHELTQL 467



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +RT  KV   G +VGR++D++    Y+EL  EL +MF I+G+     R+ W++VF D E 
Sbjct: 648 SRTRTKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKGELCP--RNKWEVVFTDDEG 705

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I S E+V+KM
Sbjct: 706 DMMLVGDDPWQEFCKMVRKIFIYSSEEVKKM 736


>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
          Length = 973

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 193/356 (54%), Positives = 227/356 (63%), Gaps = 60/356 (16%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP 
Sbjct: 30  QGAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPS 89

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTL 131
           QL+CQ+HN+T+HAD +TDEVYAQMTLQP++ E   D F    LG    SK PT YFCK L
Sbjct: 90  QLLCQVHNITLHADKDTDEVYAQMTLQPVNSE--TDVFPIPTLGAYTKSKHPTEYFCKNL 147

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHL
Sbjct: 148 TASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 207

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FV AKRL AGDSVLFI    +  ++ + R  +   + PS         +G+  
Sbjct: 208 LTTGWSLFVGAKRLKAGDSVLFIRTSPSPFVIPVARYNKATYMQPS---------VGMR- 257

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
                      F + F                                   ETEESS RR
Sbjct: 258 -----------FAMMF-----------------------------------ETEESSKRR 271

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
           Y GT+ GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 272 YTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPS 327



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 70/91 (76%)

Query: 689 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           P RT+ KV K GSVGRS+D++ F +Y+ELR  +  MFG++GK E P  S W+LV+VD EN
Sbjct: 795 PVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEN 854

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           DVLL+GDDPWE F++ V  I+ILSP +VQ+M
Sbjct: 855 DVLLVGDDPWEEFINCVRCIRILSPSEVQQM 885


>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 826

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 190/364 (52%), Positives = 251/364 (68%), Gaps = 14/364 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LP +L+C++
Sbjct: 22  LYDELWHACAGPLVTVPRVGDMVYYFPQGHIEQVEASMNQVAANQMRLY-DLPSKLLCRV 80

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG-------IPSKQPTNYFCKTLT 132
            NV + A+ +TDEVYAQ+ L P  PE+ +      E         +P++     FCKTLT
Sbjct: 81  LNVELKAEADTDEVYAQVMLMP-EPEQSEAAATTTEKSSSATGGTMPARPAVRSFCKTLT 139

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL
Sbjct: 140 ASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 199

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + + SSV+SS SMH+G+LA 
Sbjct: 200 QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 259

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           A HA  T + FTV++ PR S SEF+IP  KY ++V +   S+G RF+M FE EE+  +R+
Sbjct: 260 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVKNI-YSIGTRFKMRFEGEEAPEQRF 318

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL- 371
            GTI G  +LD + W  S WRS+KV WDES+   R  RVS WEIEP ++ P+ P   PL 
Sbjct: 319 TGTIVGSDNLDQL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPPVNP--LPLS 375

Query: 372 RLKR 375
           R KR
Sbjct: 376 RAKR 379



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 6/137 (4%)

Query: 647 TSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRS 705
           T   P VS    G +    ++  C Q S +    V        TR+  KV+K G ++GRS
Sbjct: 656 TDCSPEVSLSIAGTTDNEKNIQQCPQSSKD----VQSKSHGASTRSCTKVHKQGVALGRS 711

Query: 706 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 765
           +D+S+F  Y+EL  EL +MF  +G+     ++ WQ+V+ D E D++L+GDDPWE F S V
Sbjct: 712 VDLSKFVDYDELTAELDKMFDFDGELMSSNKN-WQIVYTDNEGDMMLVGDDPWEEFCSMV 770

Query: 766 WYIKILSPEDVQKMGEQ 782
             I I + E+VQKM  +
Sbjct: 771 RKICIYTKEEVQKMNSK 787


>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
 gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
          Length = 676

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 198/377 (52%), Positives = 261/377 (69%), Gaps = 11/377 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G  GD   L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NL
Sbjct: 11  GSAGD--ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NL 67

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           P +++C++ NV + A+ ++DEVYAQ+ LQP + E+ + T    E   P +   + FCKTL
Sbjct: 68  PHKILCKVVNVELRAETDSDEVYAQIMLQPQT-EQSEPTSPDPEPPEPERCNIHSFCKTL 126

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTH G SV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 127 TASDTSTH-GLSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHL 185

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA
Sbjct: 186 LTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLA 245

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A+HA +T + F+VF+ PR S SEFV+ + KY++A  H ++SVGMRF+M FE +ES  RR
Sbjct: 246 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KMSVGMRFKMRFEGDESPERR 304

Query: 312 YMGTITGISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
           + G I G+  + P      W+NS WRS+KV WDE +A  R  RVS WE+EPL      P 
Sbjct: 305 FSGIIIGMGCM-PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEPLNRTNPQPP 363

Query: 368 LFPLRLKRPWHPSTSSF 384
             PLR KR   P++ S 
Sbjct: 364 QPPLRNKRARPPASPSI 380



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 10/160 (6%)

Query: 626 VFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMP-----LGDSGFHNSMYGCMQDSSELLHN 680
           +FG+ I SS +    TV+S      P   S+      L      N        SS+   N
Sbjct: 477 LFGIEIGSSAVSPVVTVASVGHDPPPPALSVDAESDQLSQPSHANKATDAPAASSDRSPN 536

Query: 681 VGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 739
             +  Q    R+  KV   G +VGR++D++R   Y++LR +L +MF I G+    L + W
Sbjct: 537 ETESRQ---ARSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIPGELSASL-NKW 592

Query: 740 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++ D E+D++L+GDDPW  F   V  I I S E+ + +
Sbjct: 593 KVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSL 632


>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
          Length = 830

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/370 (50%), Positives = 250/370 (67%), Gaps = 11/370 (2%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP +
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TN 125
           + C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  +
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS +M
Sbjct: 196 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNM 255

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           H+G+LA A HA  T+S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE E
Sbjct: 256 HLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGE 314

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           E++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P +
Sbjct: 315 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCH 373

Query: 366 PSLFPLRLKR 375
            +  P+R KR
Sbjct: 374 VNPLPVRFKR 383



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 672 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 730
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 683 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 742

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 790
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 743 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 801

Query: 791 SGQRANSRGNCGRDPVG 807
           S   +  RG   RDP G
Sbjct: 802 SLSDSLGRGVASRDPRG 818


>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
 gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
          Length = 810

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 184/351 (52%), Positives = 241/351 (68%), Gaps = 13/351 (3%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGPL SLP  G  VVYFPQGH EQVA ++       +P + +L PQ+ C++ NV
Sbjct: 47  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVAPSSPFS-PMEMPTF-DLQPQIFCKVVNV 104

Query: 83  TMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 132
            + A+ E DEVY Q+ L P        L  +E ++  V  E G  +P+K   + FCKTLT
Sbjct: 105 QLLANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGGGGLPAKSTPHMFCKTLT 164

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 165 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 224

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P SV+   + +  +L+ 
Sbjct: 225 TTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNGLPDSVIGKQNSYPSVLSV 284

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            A+A +T S F V ++PRAS ++FV+P  KY+K++ +  V +G RF+M FE ++S  RR 
Sbjct: 285 VANAISTKSMFNVLYSPRASHADFVVPYKKYMKSIMNP-VCIGTRFKMRFEMDDSPERRC 343

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            G +TGISDL+P RW NS WR + V WDE    + Q RVS WEI+P  + P
Sbjct: 344 SGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSVSLP 394



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 19/188 (10%)

Query: 607 GKDAAVGTENCNTDSQN------SVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLG- 659
           G+DA + +   N   +N      S+  GV  D  G   P  +S   T  +PG +S  LG 
Sbjct: 571 GQDARMRSYATNFPRENFQFGAPSIQAGVSRDEVGK--PNQLSDLKTQ-EPGSASPALGV 627

Query: 660 ------DSGFHNSMYGC-MQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRF 711
                 D+ F  +  GC +   S    +     Q +  R+  KV+K GS VGR++D+SR 
Sbjct: 628 NLRSQKDNSFGGTSSGCKLFGFSLTAESPNPNSQNSGKRSCTKVHKQGSLVGRAIDLSRL 687

Query: 712 SSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 771
           + Y++L  EL ++F +EG  +DP   GW++++ D ENDV+++GDDPW  F + V  I I 
Sbjct: 688 NGYSDLLSELERLFSMEGLLQDP-NKGWRILYTDSENDVMVVGDDPWHEFCNVVSKIHIY 746

Query: 772 SPEDVQKM 779
           + E+V+KM
Sbjct: 747 TQEEVEKM 754


>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
          Length = 832

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/370 (50%), Positives = 250/370 (67%), Gaps = 11/370 (2%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP +
Sbjct: 18  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 77

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TN 125
           + C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  +
Sbjct: 78  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 137

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRG
Sbjct: 138 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 197

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS +M
Sbjct: 198 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNM 257

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           H+G+LA A HA  T+S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE E
Sbjct: 258 HLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGE 316

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           E++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P +
Sbjct: 317 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCH 375

Query: 366 PSLFPLRLKR 375
            +  P+R KR
Sbjct: 376 VNPLPVRFKR 385



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 672 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 730
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 685 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 744

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 790
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 745 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 803

Query: 791 SGQRANSRGNCGRDPVG 807
           S   +  RG   RDP G
Sbjct: 804 SLSDSLGRGVASRDPRG 820


>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 707

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/370 (50%), Positives = 250/370 (67%), Gaps = 11/370 (2%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP +
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TN 125
           + C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  +
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS +M
Sbjct: 196 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNM 255

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           H+G+LA A HA  T+S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE E
Sbjct: 256 HLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGE 314

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           E++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P +
Sbjct: 315 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCH 373

Query: 366 PSLFPLRLKR 375
            +  P+R KR
Sbjct: 374 VNPLPVRFKR 383


>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
          Length = 739

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 184/341 (53%), Positives = 245/341 (71%), Gaps = 3/341 (0%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV+LP    RV YFPQGH EQ+ A+ ++ ++  +P++ NLP +++C++
Sbjct: 84  LYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 142

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            NV + A+ +TDEVYAQ+TL P S + +  +  P  L  P++   + FCKTLTASDTSTH
Sbjct: 143 VNVVLRAESDTDEVYAQITLLPESNQNEVTSPDP-PLPEPTRCNVHSFCKTLTASDTSTH 201

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR A+   P LD S QPP QEL+A DLH  +W FRHIFRGQP+RHLLTTGWSVF
Sbjct: 202 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVF 261

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+K+LVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 262 VSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 321

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F+VF+ PR S S F++ L KY++A  H ++SVGMRF+M FE EE   R + GTI G+
Sbjct: 322 GTLFSVFYKPRTSRSTFLVSLNKYLEAQNH-KLSVGMRFKMRFEGEEVPERSFSGTIVGL 380

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
            D     W+NS WRS+KV WDE ++  R  +VS WE+EPL 
Sbjct: 381 GDNASPGWANSEWRSLKVQWDEPSSILRPDKVSAWELEPLV 421



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF+ Y++L  +L +MF IEG+    L+  WQ+V+ D E+D
Sbjct: 614 RSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSLKK-WQVVYTDDEDD 672

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW  F S V  I I + E+V+++
Sbjct: 673 MMLVGDDPWNEFCSMVRKIFIYTTEEVKRL 702


>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
 gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
          Length = 309

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 194/274 (70%), Positives = 232/274 (84%), Gaps = 3/274 (1%)

Query: 5   TSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH 64
           +SG+     EG+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D+ 
Sbjct: 6   SSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDN- 64

Query: 65  IPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQP 123
           IP YP+LP +LIC+L ++T+HAD ETDEVYAQMTLQP++ +  +D  +  ELG+  +KQP
Sbjct: 65  IPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVN-KYDRDAMLASELGLKQNKQP 123

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
             +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+
Sbjct: 124 AEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIY 183

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQPKRHLLTTGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSD
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSD 243

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFV 277
           SMHIG+LAAAAHAAA +S FT+F+NPR   S  +
Sbjct: 244 SMHIGILAAAAHAAANSSPFTIFYNPRYYSSYLI 277


>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
 gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
          Length = 811

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 189/356 (53%), Positives = 241/356 (67%), Gaps = 15/356 (4%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQ-VAATTNKEVDSHIPNYPNLPPQLICQ 78
           +  ELWHACAGPL SLP  G  VVYFPQGH E+ V+A     V   +P +  L PQ+ C+
Sbjct: 59  IYKELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTF-GLQPQIFCR 117

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPE---------EQKDTFVPIE-LGI-PSKQPTNYF 127
           + +V + A+ E DEVY Q+TL PL PE         E +D+    E  G+ P K  ++ F
Sbjct: 118 VEDVQLLANKENDEVYTQLTLLPL-PESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMF 176

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
           CKTLTASDT+THGGFSVPRRAAE  FP LD+  Q P+QELIA+DLH VEWKFRHI+RGQP
Sbjct: 177 CKTLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQP 236

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 247
           +RHLLTTGWS+FVS K LV+GD+VLF+  E   L LGIRRA RP   +P S++ S     
Sbjct: 237 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGP 296

Query: 248 GLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES 307
            +L++ A A +  S F VF++PRAS ++FV+P  KYVKA+ ++R+ VG RF+M F+ ++S
Sbjct: 297 DVLSSVATALSAKSTFHVFYSPRASHADFVVPYQKYVKAI-NSRIPVGTRFKMKFDLDDS 355

Query: 308 SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
             RRY G +TGISD+DP RW NS WR + V WDE      Q RVS WEI+   + P
Sbjct: 356 PERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVSLP 411



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 2/111 (1%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R+  KV+K GS VGR++D+SR + Y++L  EL ++F +E    DP   GW++++ 
Sbjct: 678 QSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNMEDLLRDP-NKGWRILYT 736

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRA 795
           D END++++GDDPW  F   V  I I + E+V+KM  +G+   + S  + A
Sbjct: 737 DSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMTIEGISDDTQSCLEEA 787


>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
          Length = 673

 Score =  368 bits (944), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 183/343 (53%), Positives = 244/343 (71%), Gaps = 5/343 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV+LP VG RV YFPQGH EQ+ A+ ++ ++  +P++ +LP +++C++
Sbjct: 19  LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSF-DLPSKILCKV 77

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASDTST 138
            +V   A+ +TDEVYAQ+TL P    +Q +   P + L  P +   + FCKTLTASDTST
Sbjct: 78  ASVQRKAEPDTDEVYAQITLVP--EVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTST 135

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A+   P LD + QPP QELIA DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 195

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+K+LVAGD+ +F+      L +G+RR +R    MPSSV+SS SMH+G+LA A++A +
Sbjct: 196 FVSSKKLVAGDAFIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSMHLGVLATASYALS 255

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T S F++F+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE   RR+ GTI G
Sbjct: 256 TRSMFSIFYKPRTSLSEFIVSVNKYLEARSH-KLSVGMRFKMRFEGEEVPERRFSGTIVG 314

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           +       W++S WRS+KV WDE ++  R  RVS WE+EPL  
Sbjct: 315 VEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVA 357



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF  Y +L ++L  MF I+G+     ++ WQ+V+ D E+D
Sbjct: 546 RSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKN-WQVVYTDDEDD 604

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+K+
Sbjct: 605 MMMVGDDPWNEFCSMVRKIFIYTSEEVRKL 634


>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
 gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
 gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
 gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
 gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 788

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 192/368 (52%), Positives = 244/368 (66%), Gaps = 14/368 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           + SELWHACAGPL  LP  G  VVYFPQGH EQ A  +       IP + +L PQ++C++
Sbjct: 62  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSS-PLEIPKF-DLNPQIVCRV 119

Query: 80  HNVTMHADVETDEVYAQMTLQPLSP--------EEQKDTFVPIELGIPS--KQPTNYFCK 129
            NV + A+ +TDEVY Q+TL PL          +E K+     E    S  K+  + FCK
Sbjct: 120 VNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCK 179

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAE  F  LD+  Q P+QELIA+DLH VEWKFRHI+RGQP+R
Sbjct: 180 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 239

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FVS K LV+GD+VLF+ +E  +L LGIRRA RP   +P S++  +S    +
Sbjct: 240 HLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 298

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           L+  A+A +T S F VF++PRA+ +EFVIP  KY+ ++  + V +G RFRM FE ++S  
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCIGTRFRMRFEMDDSPE 357

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RR  G +TG+ DLDP RW NS WR + V WDES   + Q RVS WEI+P  + P      
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQS 417

Query: 370 PLRLKRPW 377
             R KRPW
Sbjct: 418 SPRPKRPW 425



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 2/97 (2%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R   KV+K GS VGR++D+SR + Y++L  EL ++F +EG   DP   GW++++ 
Sbjct: 660 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDP-EKGWRILYT 718

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
           D END++++GDDPW  F + VW I + + E+V+   +
Sbjct: 719 DSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENAND 755


>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
 gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 186/352 (52%), Positives = 240/352 (68%), Gaps = 15/352 (4%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWH CAG L SLP  G  VVYFPQGH EQ AA+++      I  + +LPPQ+ C++ NV
Sbjct: 55  ELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTF-DLPPQIFCRVVNV 112

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL-----------GIPSKQPTNYFCKTL 131
            + A+ E DEVY Q+TL P  PE         EL           G P+K   + FCKTL
Sbjct: 113 QLLANKENDEVYTQVTLLP-QPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKTL 171

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEW+FRHI+RGQP+RHL
Sbjct: 172 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 231

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P S++ + + +  +L+
Sbjct: 232 LTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVLS 291

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            AA+A AT S F VF++PRAS +EFVIP  KYVK++ +  +S+G RF+M ++ ++S  RR
Sbjct: 292 LAANAVATKSMFHVFYSPRASHAEFVIPYQKYVKSITNP-ISIGTRFKMRYDMDDSPERR 350

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
             G +TGI DLDP RW NS WR + V WD+    + Q RVS WEI+P  + P
Sbjct: 351 SSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLP 402



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 2/121 (1%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           D  F  +  GC      L        Q +  R+  KV+K G+ VGR++D+SR + Y +L 
Sbjct: 639 DDTFSGTAAGCKLFGFSLTGETPPNSQNSGKRSCTKVHKQGNLVGRAIDLSRLNGYGDLF 698

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
            EL ++FG+EG   DP + GWQ+++ D END++++GDDPW  F + V  I I + E+V+K
Sbjct: 699 SELERLFGMEGLLRDPDK-GWQILYTDSENDMMVVGDDPWHEFCNVVSKIHIYTQEEVEK 757

Query: 779 M 779
           M
Sbjct: 758 M 758


>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 791

 Score =  365 bits (936), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 190/368 (51%), Positives = 242/368 (65%), Gaps = 14/368 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           + SELWHACAGPL  LP  G  VVYFPQGH EQ A  +       IP + +L PQ+ C++
Sbjct: 57  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSS-PLEIPKF-DLNPQIFCRV 114

Query: 80  HNVTMHADVETDEVYAQMTLQPLSP--------EEQKDTFVPIELGIPS--KQPTNYFCK 129
            +V + A+ ETDEVY Q+TL PL          +E K+     E  + S  K+  + FCK
Sbjct: 115 VHVQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERNVSSSVKRTPHMFCK 174

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAE  F  LD+  Q P+QELIA+DLH VEWKFRHI+RGQP+R
Sbjct: 175 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 234

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS+FVS K L +GD+VLF+ +E  +L LGIRRA RP   +P S++  +S    +
Sbjct: 235 HLLTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 293

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           L+  A+A +T S F VF++PRA+ +EFVIP  KY+ ++    + +G RFRM FE ++S  
Sbjct: 294 LSLLANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RNPICIGTRFRMRFEMDDSPE 352

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RR  G +TG+ DLDP RW NS WR + V WDES   + Q RVS WEI+P  + P      
Sbjct: 353 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSISLPHLSIQS 412

Query: 370 PLRLKRPW 377
             R KRPW
Sbjct: 413 SPRPKRPW 420



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 2/97 (2%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R   KV+K GS VGR++D+SR + Y++L  EL ++F +EG   DP   GW++++ 
Sbjct: 663 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLTELERLFNMEGLLRDP-EKGWRILYT 721

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
           D END++++GDDPW  F + VW I + + E+V+   +
Sbjct: 722 DSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENAND 758


>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 791

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 187/352 (53%), Positives = 236/352 (67%), Gaps = 14/352 (3%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGPL SLP  G  VVYFPQGH EQVA+ +       IP Y +L PQ+ C++ NV
Sbjct: 53  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASFS-PFTPLEIPTY-DLQPQIFCRVVNV 110

Query: 83  TMHADVETDEVYAQMTLQPLSPEE----------QKDTFVPIELGIPSKQPTNYFCKTLT 132
            + A+ E DEVY Q+TL P +  E          +       +   P+K   + FCKTLT
Sbjct: 111 QLLANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPTKSTPHMFCKTLT 170

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLHDVEWKFRHI+RGQP+RHLL
Sbjct: 171 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYRGQPRRHLL 230

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P SV+ S + +  +L++
Sbjct: 231 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYPNVLSS 290

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            A+A +T S F VF++PRAS ++FV+P  KYVK++    VS+G RF+M FE +ES  RR 
Sbjct: 291 VANAISTKSKFHVFYSPRASQADFVVPYQKYVKSI-KNPVSIGTRFKMRFEMDESQERRC 349

Query: 313 M-GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
             G + G SDLDP RW  S WR + V WDE      + RVS WEI+P    P
Sbjct: 350 CSGMLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDPSAPLP 401



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R+  KV+K GS VGR++D+SR S YN+L  EL ++F +EG  +DP + GW++++ 
Sbjct: 658 QNSAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDK-GWKILYT 716

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 717 DSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKM 751


>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
 gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 179/352 (50%), Positives = 253/352 (71%), Gaps = 16/352 (4%)

Query: 31  PLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQLHNVTMHADVE 89
           PLV++P  G  V YFPQGH EQV A+TN+  D   +P Y NL P+++C++ NV + A+++
Sbjct: 4   PLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAY-NLSPKILCRVVNVQLKAELD 62

Query: 90  TDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTLTASDTSTHGGFSVPR 146
           TDEV+AQ+ L P   E Q+D  +  E  +P   ++   + FCK LTASDTSTHGGFSV +
Sbjct: 63  TDEVFAQVILLP---ETQQDVELVEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVLK 119

Query: 147 RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLV 206
           R A++  P LD SLQPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWS+FVSAK+LV
Sbjct: 120 RHADECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLV 179

Query: 207 AGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVF 266
           AGD+ +F+  E  +L +G+RRA+R P+ +PSS++SS SMHIG+LA A HA +T S FTV+
Sbjct: 180 AGDAFIFLRGETEELRVGVRRALRQPSKIPSSLISSHSMHIGILATAWHAVSTGSMFTVY 239

Query: 267 FNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVR 326
           + PR SP+EF+IP+ KY+++V     ++GMRF+M FE +++  +R+ GT+ G+ + DP +
Sbjct: 240 YKPRTSPAEFIIPVDKYMESV-KINYAIGMRFKMRFEADDAPEQRFSGTVIGVEEADPKK 298

Query: 327 WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL---RLKR 375
           W  S+WR +KV WDE++   R  RVS W++EP     + PS+ P+   RLKR
Sbjct: 299 WPRSNWRCLKVHWDETSPVHRPDRVSPWKVEPA----LAPSMDPVSGCRLKR 346



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R  VKV+K G+ VGRSLD+S+F+ YNEL  EL Q+F   G+   P +  W +VF D E+
Sbjct: 608 ARRCVKVHKQGTAVGRSLDLSKFNGYNELTAELDQIFEFNGELVAPNKD-WLIVFTDDED 666

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F S V  I I + E++ +M
Sbjct: 667 DMMLVGDDPWQEFCSMVRRIFIYTKEEINRM 697


>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
          Length = 1045

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 191/306 (62%), Positives = 231/306 (75%), Gaps = 8/306 (2%)

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W F
Sbjct: 1   NRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTF 60

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV
Sbjct: 61  RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSV 120

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SSDSMHIG+LAAAAHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFR
Sbjct: 121 ISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFR 179

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M+FETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+
Sbjct: 180 MIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV 239

Query: 360 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSL 415
            T P Y  + P    RP         D+  +  S L     WL      +  ++  F  L
Sbjct: 240 LT-PFY--ICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGL 296

Query: 416 GMFPWM 421
            +  WM
Sbjct: 297 SLVQWM 302



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 918  RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 977

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 802
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 978  LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1028


>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
          Length = 837

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 188/377 (49%), Positives = 248/377 (65%), Gaps = 23/377 (6%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELW ACAGP++SLP  GT VVYFPQGH EQ         D        +PP L C++ NV
Sbjct: 33  ELWRACAGPVISLPRKGTIVVYFPQGHLEQAPKFRAFAHD--------IPPHLFCRVLNV 84

Query: 83  TMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
            +HA++ TDEVYAQ++L P        L  + + +        + +  P + FCKTLTAS
Sbjct: 85  NLHAEIATDEVYAQVSLVPEPEVGAKSLDEDGEGNGEEEEIEELSTATP-HMFCKTLTAS 143

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAE  FP+LD+  Q P+QEL+A+DLH VEWKFRHI+RGQP+RHLLTT
Sbjct: 144 DTSTHGGFSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTT 203

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWS FV+ K+LV+GD+VLF+  E  +L LGIRRA RP   +P S+L S ++++  LAA +
Sbjct: 204 GWSSFVNQKKLVSGDAVLFLRGENGELRLGIRRAARPEGGVPYSILCSQNLNLSALAAVS 263

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
            A +T S F V++NPRASP+EF+IP  K+ K++ +  +S+G RF+M +ETE+++ +R  G
Sbjct: 264 TAVSTKSMFHVYYNPRASPAEFIIPYRKFSKSI-NQPLSIGTRFKMRYETEDATEQRPTG 322

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP---LTTF--PMYPSLF 369
            ITGI D+DPVRW  S WR + V WDE      Q +VS WEIEP   L+ F  P+ P   
Sbjct: 323 LITGIGDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEPSGSLSGFSSPLTPGSK 382

Query: 370 PLRLKRPWHPSTSSFND 386
             R+  P   +   F D
Sbjct: 383 KPRISLPSIKADFPFRD 399



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 2/119 (1%)

Query: 678 LHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 736
           LH   Q    T  R+  KV++ G+ VGR++D+S+   Y++L  EL ++F +EG   DP +
Sbjct: 698 LHAEVQSSTKTAGRSCTKVHRQGNLVGRAIDLSKLDGYDDLITELERLFNMEGLLNDPGK 757

Query: 737 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRA 795
            GWQ+V+ D E+D++L+GDDPW+ F + V  I I + ++V+ M   G    + S  + A
Sbjct: 758 -GWQVVYTDDEDDMMLVGDDPWQEFCNIVSKILIYTHDEVELMVPGGTSDDAHSCSEEA 815


>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
          Length = 758

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 189/374 (50%), Positives = 240/374 (64%), Gaps = 26/374 (6%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           + SELWHACAGPL SLP  G  VVYFPQGH EQ  A  +      IP   +L PQ+ C++
Sbjct: 50  IYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-GAMVSYSSPLDIPKL-DLSPQIFCRV 107

Query: 80  HNVTMHADVETDEVYAQMTLQPLSP----------------EEQKDTFVPIELGIPSKQP 123
            NV + A+ ETDEVY Q+TL PL                  +E+K+    +      K+ 
Sbjct: 108 ANVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSV------KKT 161

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
            + FCKTLTASDTSTHGGFSVPRRAAE  F  LD+  Q P+QELIA+DLH VEWKFRHI+
Sbjct: 162 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIY 221

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 243
           RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ +E  +L LGIRR+ RP   +P S++   
Sbjct: 222 RGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKY 281

Query: 244 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
           S    +L+  A+A +  S F VF++PRA+ SEFVIP  KY+ ++    + +G RFRM FE
Sbjct: 282 SSS-SILSLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSI-KNPICIGTRFRMRFE 339

Query: 304 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            ++S  RR  G +TG+ D+DP RW NS WR + V WDES   + Q RVS WEI+P  + P
Sbjct: 340 MDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVSPWEIDPSGSLP 399

Query: 364 MYPSLFPLRLKRPW 377
                   R KRPW
Sbjct: 400 PLSIQSSPRPKRPW 413



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 2/93 (2%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R   KV+K GS VGR++D+SR + YN+L  EL ++F +EG   DP + GW++++ 
Sbjct: 632 QSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEK-GWRILYT 690

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 777
           D END++++GDDPW  F S V  I + + E+V+
Sbjct: 691 DSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVE 723


>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 791

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 192/356 (53%), Positives = 239/356 (67%), Gaps = 22/356 (6%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGPL SL   G  VVYFPQGH EQVA+ +       IP Y +L PQ+ C++ NV
Sbjct: 54  ELWHACAGPLTSLLKKGNVVVYFPQGHLEQVASFS-PFTPLEIPTY-DLQPQIFCRVVNV 111

Query: 83  TMHADVETDEVYAQMTLQPLSPE------EQKDTFVPIELGI--------PSKQPTNYFC 128
            + A+ E DEVY Q+TL P  PE      E K+     ELG         P+K   + FC
Sbjct: 112 QLLANKENDEVYTQVTLLP-QPELEGMYSEGKEL---EELGAEEDGDERSPTKSTPHMFC 167

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEWKFRHI+RGQP+
Sbjct: 168 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPR 227

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P SV+ S + +  
Sbjct: 228 RHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYSN 287

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           +L++ A+A +T S F VF++PRAS ++FV+P  KYVK++    VS+G RF+M FE +ES 
Sbjct: 288 VLSSVANAISTKSKFHVFYSPRASHADFVVPYQKYVKSI-KNPVSIGTRFKMRFEMDESQ 346

Query: 309 VRRY-MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            RR   GT+   SDLDP RW+ S WR + V WDE      Q RVS WEI+P    P
Sbjct: 347 ERRCSSGTLIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDPSAPLP 402



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R+  KV+K GS VGR++D+SR S YN+L  EL ++F +EG  +DP + GW++++ 
Sbjct: 658 QNSAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDK-GWRILYT 716

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 717 DSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKM 751


>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
          Length = 840

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 194/392 (49%), Positives = 253/392 (64%), Gaps = 36/392 (9%)

Query: 2   KLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEV 61
           +++  G   +  EG    +  E+W ACAG L+SLP  G+ VVYF QGH EQ  A+ +   
Sbjct: 8   RVTAEGHAPRAEEGAAGTVCLEVWQACAGSLISLPRKGSVVVYFXQGHLEQAGASCDGW- 66

Query: 62  DSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-- 119
                    LPPQ+ C++ NV +HAD  +DEVYAQ++L P+ PE       P+E G+P  
Sbjct: 67  --------GLPPQVFCRVINVNLHADQVSDEVYAQVSLTPI-PE-------PVEKGLPEE 110

Query: 120 -------------SKQPT-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQ 165
                        S+  T + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+Q
Sbjct: 111 EVREDGEEEFEFVSRSATPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQ 170

Query: 166 ELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGI 225
           EL+A+DLH  EWKFRHI+RGQP+RHLLTTGWSVFV+ K+LVAGD+VLF+  E  +L LGI
Sbjct: 171 ELVAKDLHGFEWKFRHIYRGQPRRHLLTTGWSVFVNQKKLVAGDAVLFLRGESGELRLGI 230

Query: 226 RRAIRP-PTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYV 284
           RRA RP    +PS  L S ++     AA + A +T S F V +NPRASP+EF++P  KY 
Sbjct: 231 RRAGRPRGGSVPSLALLSQNLSGSTFAAVSKAVSTKSVFHVSYNPRASPAEFIVPYWKYY 290

Query: 285 KAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 344
           K  F+ + S+GMRF+M  ETE+++ RR  G I+G+ D+DPVRW  S WR + V WDE + 
Sbjct: 291 KN-FNQQFSLGMRFKMKIETEDTAERRCTGLISGVGDIDPVRWPGSKWRCLMVRWDEDSG 349

Query: 345 GERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            +R  RVS WEI+ L + P++ S     LKRP
Sbjct: 350 NDRLDRVSPWEIDLLGSVPVF-SPPATGLKRP 380



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 66/93 (70%), Gaps = 2/93 (2%)

Query: 688 TPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           T  R+  KV+K GS VGR++++S+F  Y++L  EL ++F +EG   DP + GWQ+V+ D 
Sbjct: 699 TANRSCTKVHKQGSMVGRAINLSKFEGYDDLISELERLFNMEGLLNDP-KKGWQVVYTDS 757

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++D++L+GDDPW+ F + V  I I + ++V+KM
Sbjct: 758 DDDMMLVGDDPWQEFCNIVSKILIYTHDEVEKM 790


>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
 gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
          Length = 376

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 189/354 (53%), Positives = 255/354 (72%), Gaps = 9/354 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 78
           L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  D   +P Y NLPP+++C+
Sbjct: 4   LYKELWHACAGPLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAY-NLPPKILCR 62

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 137
           + NV + A+++TDEV+AQ+ L P++ E+  D     +L  P  +P  + FCK LTASDTS
Sbjct: 63  VVNVQLKAELDTDEVFAQVILLPVA-EQDVDLVEKEDLPPPPARPRVHSFCKMLTASDTS 121

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSV RR A++  P LD SLQPPAQEL+A+DLH  EW+FRHIFRGQP+RHLL +GWS
Sbjct: 122 THGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 181

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           +FVSAK+LVAGD+ +F+  E  +L +G+RRA+  P+ +PSSV+SS SMHIG+LA   HA 
Sbjct: 182 LFVSAKKLVAGDAFIFLRGETEELRVGVRRALSQPSNVPSSVMSSHSMHIGILATVWHAV 241

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           +T S FTV++ PR SP+EF+IP+ KY ++V     ++GMRF+M FE EE+  +R+ GT+ 
Sbjct: 242 STGSMFTVYYKPRTSPAEFIIPIDKYRESV-KINYAIGMRFKMKFEAEEAPEQRFSGTVI 300

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           G+ + DP +W  S WR +KV WDE++   R  RVS W+IE      + PSL P+
Sbjct: 301 GVEEADPKKWPRSKWRCLKVRWDETSPVHRPDRVSPWKIE----RALAPSLDPV 350


>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
          Length = 362

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 180/342 (52%), Positives = 239/342 (69%), Gaps = 7/342 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELW ACAGPL ++P VG RV YFPQGH EQV A+TN+  +       NLP ++ C++
Sbjct: 22  LFVELWKACAGPLAAVPAVGERVFYFPQGHIEQVEASTNQVAEQQGTPLYNLPWKIPCKV 81

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQ-----KDTFVP-IELGIPSKQPTNYFCKTLTA 133
            NV + A+ +TDEVYAQ+TL P   +++     ++  VP     +  +   + FCKTLTA
Sbjct: 82  MNVELKAEQDTDEVYAQLTLLPEKKQDENVSKEEEEVVPDAPPAVAERTRVHSFCKTLTA 141

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW FRHIFRGQP+RHLL 
Sbjct: 142 SDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFRGQPRRHLLQ 201

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A
Sbjct: 202 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRANIPSSVISSHSMHLGVLATA 261

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
            H A T + FTV++ PR SP+EFV+P   + +++     S+GMRF+M FE EE++ +R+ 
Sbjct: 262 WHVANTGTMFTVYYKPRTSPAEFVVPRDWFDESLKRNH-SIGMRFKMRFEGEEAAEQRFT 320

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWE 355
           GTI GI D DP  W +S WRS+KV WDE+++  R  RVS W+
Sbjct: 321 GTIVGIGDSDPSGWVDSKWRSLKVRWDEASSVPRPERVSPWQ 362


>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
 gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
 gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
 gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
 gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
 gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 602

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 189/370 (51%), Positives = 252/370 (68%), Gaps = 12/370 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 78
           L +ELW  CAGPLV +P    RV YFPQGH EQ+ A+TN+ ++S  IP + +LPP+++C+
Sbjct: 22  LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  +G P+KQ  + F K LTASDTST
Sbjct: 81  VLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVG-PTKQEFHSFVKILTASDTST 139

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  PSLD +   P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E   L +G+RR  R  + MP+SV+SS SMH+G+LA A+HA  
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES  R + GTI G
Sbjct: 260 TTTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIFTGTIVG 316

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM-YPSLFP---LRL 373
             DL   +W  S WRS++V WDE T  +R  +VS WEIEP L T P+  P+  P    + 
Sbjct: 317 SGDLS-SQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKR 375

Query: 374 KRPWHPSTSS 383
            RP  PS  +
Sbjct: 376 SRPIEPSVKT 385



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 488 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 545

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L GDDPW  F      I I S ++V+KM
Sbjct: 546 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 576


>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
           Aux/IAA_ARF_dimerisation [Medicago truncatula]
          Length = 810

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 185/364 (50%), Positives = 240/364 (65%), Gaps = 14/364 (3%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGPL SLP  G  VVYFPQGH EQVA+ +       IP Y  L PQ++C++ NV
Sbjct: 56  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFS-SLEIPTY-GLQPQILCRVVNV 113

Query: 83  TMHADVETDEVYAQMTLQPLSP-------EEQKDTFVPIELG---IPSKQPTNYFCKTLT 132
            + A+ E DEVY Q+ L P +        +++ +     + G    P+K  ++ FCKTLT
Sbjct: 114 QLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLT 173

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH V WKFRHI+RGQP+RHLL
Sbjct: 174 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHLL 233

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA RP   +P S++ + S     L++
Sbjct: 234 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQSCSPSFLSS 293

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            A+A +  S F VF++PRAS ++FV+P  KY K++    V++G RF+M FE +ES  RR 
Sbjct: 294 VANAISAKSMFHVFYSPRASHADFVVPYQKYAKSI-RNPVTIGTRFKMKFEMDESPERRC 352

Query: 313 -MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
             G +TG+SDLDP +W  S WR + V WDE      Q RVS WEI+P T+ P        
Sbjct: 353 SSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNIQSSR 412

Query: 372 RLKR 375
           RLK+
Sbjct: 413 RLKK 416



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R+  KV+K GS VGR++D+SR SSYN+L  EL ++FG+EG   DP + GW++++ 
Sbjct: 677 QNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYT 735

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 736 DSENDIMVVGDDPWHEFCDMVSKIHIYTQEEVEKM 770


>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
          Length = 1055

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 184/358 (51%), Positives = 247/358 (68%), Gaps = 9/358 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 78
           L +ELW ACAGPLV +P VG RV YFPQGH EQ+ A+TN+ ++S  IP++  LPP+++CQ
Sbjct: 21  LYTELWKACAGPLVEVPLVGERVFYFPQGHMEQLVASTNQGIESEKIPDF-KLPPKILCQ 79

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + +V + A+ +TDEVYAQ+TL+P   + +  +  P  +  P+KQ  + F K LTASDTST
Sbjct: 80  VLSVMLKAEHDTDEVYAQITLKPEEDQSEPTSLDP-PIVEPTKQMFHSFVKILTASDTST 138

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  P+LD +   P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 139 HGGFSVLRKHATECLPALDMTQAIPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 198

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E   L +G+RR  R    MP+SV+SS SMH+G+LA A+HA  
Sbjct: 199 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQNTMPASVISSQSMHLGVLATASHAVN 258

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES  R + GTI G
Sbjct: 259 TQTMFLVFYKPRI--SQFIVSVNKYMEAMKHG-FSLGTRFRMRFEGEESPERIFTGTIVG 315

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
           I DL   +W  S WRS++V WDE T  +R  +VS WEIEP    P  P+  P +  +P
Sbjct: 316 IGDLS-SQWPASTWRSLQVQWDEPTTVQRPDKVSPWEIEPF--LPSSPASTPSQQSQP 370



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +RT  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 454 SRTRTKVQMQGIAVGRAVDLTLLKSYDELIKELEEMFEIQGQLLP--RDKWIVVFTDDEG 511

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPED 775
           D++L GDDPW  F      I I S ++
Sbjct: 512 DMMLAGDDPWNEFCKMAKKIFIYSSDE 538


>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
          Length = 693

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 180/346 (52%), Positives = 241/346 (69%), Gaps = 8/346 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G EGD+  L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E+   IP + NL
Sbjct: 6   GGEGDD--LYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLF-NL 62

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           P +++C++ ++ + A+ ETDEVYAQ+TL P   + +  +  P     P +   + FCK L
Sbjct: 63  PSKILCRVIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPC-TPEPPRPTVHSFCKVL 121

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV R+ A +  P LD +   P QEL+A+DLH  EW+F+HIFRGQP+RHL
Sbjct: 122 TASDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHL 181

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS FV++KRLVAGDS +F+  +  +L +G+RR  R  + MP+SV+SS SMH+G+LA
Sbjct: 182 LTTGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLA 241

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A+HA AT + F V++ PR   S+F+I L KY++AV +   +VGMRF+M FE E+S  RR
Sbjct: 242 TASHAVATQTLFIVYYKPRT--SQFIIGLNKYLEAVSNG-FAVGMRFKMRFEGEDSPERR 298

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           + GTI G  D  P  W +S WRS+KV WDE  +  R  +VS WEIE
Sbjct: 299 FSGTIVGGEDFSP-EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIE 343



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV   G +VGR++D++    Y+EL +EL +MF I+G+     R  W++VF D E 
Sbjct: 580 TRSRTKVQMQGIAVGRAVDLTALEGYDELIDELEEMFEIKGELRP--RYKWEIVFTDDEG 637

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 638 DMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 668


>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 180/346 (52%), Positives = 241/346 (69%), Gaps = 8/346 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G EGD+  L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E+   IP + NL
Sbjct: 6   GGEGDD--LYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLF-NL 62

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           P +++C++ ++ + A+ ETDEVYAQ+TL P   + +  +  P     P +   + FCK L
Sbjct: 63  PSKILCRVIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPC-TPEPPRPTVHSFCKVL 121

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV R+ A +  P LD +   P QEL+A+DLH  EW+F+HIFRGQP+RHL
Sbjct: 122 TASDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHL 181

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS FV++KRLVAGDS +F+  +  +L +G+RR  R  + MP+SV+SS SMH+G+LA
Sbjct: 182 LTTGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLA 241

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A+HA AT + F V++ PR   S+F+I L KY++AV +   +VGMRF+M FE E+S  RR
Sbjct: 242 TASHAVATQTLFIVYYKPRT--SQFIIGLNKYLEAVSNG-FAVGMRFKMRFEGEDSPERR 298

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           + GTI G  D  P  W +S WRS+KV WDE  +  R  +VS WEIE
Sbjct: 299 FSGTIVGGEDFSP-EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIE 343



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV   G +VGR++D++    Y+EL +EL +MF I+G+     R  W++VF D E 
Sbjct: 569 TRSRTKVQMQGIAVGRAVDLTALEGYDELIDELEEMFEIKGELRP--RYKWEIVFTDDEG 626

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 627 DMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 657


>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
          Length = 799

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 177/342 (51%), Positives = 237/342 (69%), Gaps = 6/342 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELW  CAGPLV +P  G RV YFPQGH EQ+ A+T++E++  IP++ NLP ++ C++
Sbjct: 112 LYRELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHF-NLPAKIFCRV 170

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            N+ + A+ +TDEVYA + L P S + +     P  +  P KQ  + FCK LTASDTSTH
Sbjct: 171 VNIQLLAEQDTDEVYACIALLPESDQTEPTNPDP-NISEPPKQKFHSFCKILTASDTSTH 229

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV R+ A +  P+LD +   P QEL A+DLH  EWKF+HI+RGQP+RHLLTTGWS F
Sbjct: 230 GGFSVLRKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTF 289

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           V++KRLVAGD+ +F+  E  QL +G+RR  R  + MPSSV+SS SMH+G+LA A+HA  T
Sbjct: 290 VASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMT 349

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F V++ PR   S+F++ L KY++AV + + S+GMRF+M FE ++S  RR+ GTI G+
Sbjct: 350 RTMFLVYYKPRT--SQFIVGLNKYLEAV-NNKFSLGMRFKMRFEGDDSPERRFSGTIVGV 406

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
            D+    WSNS WRS+KV WDE     R  RVS WEIEP   
Sbjct: 407 GDVS-AGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVA 447



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           RT  KV   G +VGR+ D++  S Y++L EEL ++F I G+     +  W + F D END
Sbjct: 679 RTRTKVQMQGVAVGRAFDLTTLSGYDDLIEELEKLFEIRGELHS--QDKWAVTFTDDEND 736

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW  F + V  I I S ED++KM
Sbjct: 737 MMLVGDDPWPEFCNMVKRIFICSREDLKKM 766


>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
          Length = 555

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 181/348 (52%), Positives = 242/348 (69%), Gaps = 7/348 (2%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQL 75
           N  L +ELW ACAGPLV +P  G +V YFPQGH EQ+ A+TN+ ++S  IP++  LPP++
Sbjct: 18  NDELYTELWKACAGPLVEVPLAGEKVFYFPQGHMEQLVASTNQGIESEEIPDF-KLPPKI 76

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           +C++ +V + A+ +TDEVYAQ+TL+P   + +  +  P  L  P+KQ  + F K LTASD
Sbjct: 77  LCRVLSVMLKAEHDTDEVYAQITLKPEEDQSELTSLDP-PLVEPTKQMFHSFVKILTASD 135

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSV R+ A +  P+LD     P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTG
Sbjct: 136 TSTHGGFSVLRKHATECLPALDMGQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTG 195

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WS FVS+KRLVAGD+ +F+  E   L +G+RR  R  + MP+SV+SS SMH+G+LA A+H
Sbjct: 196 WSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASH 255

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           A  T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES  R + GT
Sbjct: 256 AVVTKTIFLVFYKPRI--SQFIVGVNKYMEAMKHG-FSLGTRFRMRFEGEESPERMFTGT 312

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           I GI DL   +W  S WRS++V WDE T  +R  RVS WEIEP  + P
Sbjct: 313 IVGIGDLSS-QWPASTWRSLQVQWDEPTTFQRPDRVSPWEIEPFLSSP 359



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           RT  KV   G +VGR++D++   SYNEL +EL +MF I+G+     R  W +VF D E D
Sbjct: 451 RTRTKVIMQGVAVGRAVDLTLLKSYNELIKELEEMFEIKGQLLT--REKWVVVFTDDEGD 508

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L GDDPW  F      I I S ++V+KM
Sbjct: 509 MMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 538


>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 187/353 (52%), Positives = 237/353 (67%), Gaps = 31/353 (8%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 74
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ++            +YP    +LPP 
Sbjct: 44  CL--ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS------------DYPAVAYDLPPH 89

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK----------DTFVPIELGIPSKQPT 124
           + C++ +V +HA+V TDEVYAQ++L P +  +QK               IE  I S  P 
Sbjct: 90  VFCRVVDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTP- 148

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH  EW+FRHI+R
Sbjct: 149 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYR 208

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LGIRRA +     P   L S  
Sbjct: 209 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQ 268

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           +++  L A  +A +T S F + +NPRAS SEF+IPL K+ K++ H+  S GMRF+M  ET
Sbjct: 269 LNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHS-FSAGMRFKMRVET 327

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           E+++ RRY G ITGISD+DPVRW  S WR + V WD+  A  R  RVS WEIE
Sbjct: 328 EDAAERRYTGLITGISDMDPVRWPGSKWRCLLVRWDDIEA-NRHNRVSPWEIE 379


>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
          Length = 584

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 191/373 (51%), Positives = 246/373 (65%), Gaps = 14/373 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEV-DSHIPNYPNLPPQLICQ 78
           L  ELW ACAGPLV +P    RV YFPQGH EQ+ A+TN+ V D  IP + NLPP+++C+
Sbjct: 9   LYMELWKACAGPLVEVPRYDERVFYFPQGHMEQLVASTNQRVVDKDIPVF-NLPPKILCR 67

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ ETDEVYAQ+TLQP   + +  +  P  L  P+KQ  + F K LTASDTST
Sbjct: 68  VLNVMLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLTEPAKQTVDSFVKILTASDTST 126

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  P LD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 127 HGGFSVLRKHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 186

Query: 199 FVSAKRLVAGDSVLFIW-NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           FV++KRLVAGD+ +F+  ++   L +G+RR  +  + MP+SV+SS SMH+G+LA A+HA 
Sbjct: 187 FVTSKRLVAGDAFVFLRGHQTGDLRVGVRRLAKQQSTMPASVISSQSMHLGVLATASHAF 246

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
            T + F V + PR   S+F+I + KY+ A       +GMRFRM FE EES  R + GTI 
Sbjct: 247 NTTTMFVVLYKPRI--SQFIISVNKYM-AAMKKGFGIGMRFRMRFEGEESPERIFTGTIV 303

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-----LTTFPMYPSLFPLR 372
           G  DL P +W  S WRS++V WDES+  +R  +VS WEIEP     LTT P  P     R
Sbjct: 304 GTGDLSP-QWPASKWRSLQVQWDESSTVQRPNKVSPWEIEPFLPSTLTTSPTQPYSKSKR 362

Query: 373 LKRPWHPSTSSFN 385
             RP  PS S   
Sbjct: 363 -SRPIDPSVSEIT 374



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 3/103 (2%)

Query: 683 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q + TR+  KV   G+ VGR++D++   SY+EL  EL +MF IEG+     +  W +
Sbjct: 465 QKQQTSSTRSRTKVQMQGTAVGRAVDLTLLRSYDELIRELEKMFEIEGELR--TKDKWAI 522

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 784
           VF D E D++L+GDDPW+ F      + I S ++V+KM  + +
Sbjct: 523 VFTDDEGDMMLVGDDPWDEFCKMAKKLFIYSSDEVKKMSSKSL 565


>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 793

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 184/364 (50%), Positives = 240/364 (65%), Gaps = 14/364 (3%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGPL SLP  G  VVYFPQGH EQ AA+ +      +P Y +L PQ+ C++ N+
Sbjct: 50  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPMEMPTY-DLQPQIFCRVVNI 107

Query: 83  TMHADVETDEVYAQMTLQPLSP-------EEQKDTFVPIELG---IPSKQPTNYFCKTLT 132
            + A+ E DEVY Q+TL P +         ++ +     E G    P+K   + FCKTLT
Sbjct: 108 QLLANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTPHMFCKTLT 167

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEWKFRHI+RGQP+RHLL
Sbjct: 168 ASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 227

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA RP   +P S++ S S +   L++
Sbjct: 228 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGSQSYYPNFLSS 287

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            A+A +  S F VF++PRAS ++F +P  KY+K++    V++G RF+M FE +ES  RR 
Sbjct: 288 VANAISAKSMFHVFYSPRASHADFAVPYQKYIKSI-KNPVTIGTRFKMKFEMDESPERRC 346

Query: 313 M-GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
             G +TG+SDLDP +W  S WR + V WDE      Q RVS WE++P  + P        
Sbjct: 347 TSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDPSASLPPLSIQSSR 406

Query: 372 RLKR 375
           RLK+
Sbjct: 407 RLKK 410



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 65/95 (68%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R+  KV+K GS VGR++D+SR SSYN+L  EL ++F +EG   DP   GW++++ 
Sbjct: 659 QNSSKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLIELERLFSMEGLLIDP-NKGWRILYT 717

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 718 DSENDIMVVGDDPWHEFCDVVSKIHIHTQEEVEKM 752


>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 187/358 (52%), Positives = 239/358 (66%), Gaps = 40/358 (11%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 74
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ++            +YP    +LPP 
Sbjct: 47  CL--ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS------------DYPAVAYDLPPH 92

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE---------------EQKDTFVPIELGIP 119
           + C++ +V +HA+V TDEVYAQ++L P + +               E++D    IE  I 
Sbjct: 93  VFCRVVDVKLHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEED----IEGSIK 148

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           S  P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH  EW+F
Sbjct: 149 SMTP-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRF 207

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LGIRRA +     P   
Sbjct: 208 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPA 267

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           L S  +++  L A  +A +T S F + +NPRAS SEF+IPL K+ K++ H+  S GMRF+
Sbjct: 268 LCSQQLNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHS-FSAGMRFK 326

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           M  ETE+++ RRY G ITGISD+DPVRW  S WR + V WD+  A  R  RVS WEIE
Sbjct: 327 MRVETEDAAERRYTGLITGISDMDPVRWPGSKWRCLLVRWDDIEA-NRHNRVSPWEIE 383


>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
 gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
           [Arabidopsis thaliana]
 gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 601

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 242/349 (69%), Gaps = 7/349 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 78
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+  VD  IP + NLPP+++C+
Sbjct: 18  LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  L  P+K   + F K LTASDTST
Sbjct: 77  VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKPTVDSFVKILTASDTST 135

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 136 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FV++KRLVAGD+ +F+  E   L +G+RR  +  + MP+SV+SS SM +G+LA A+HA  
Sbjct: 196 FVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 255

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F VF+ PR   S+F+I + KY+ A+     S+GMR+RM FE EES  R + GTI G
Sbjct: 256 TTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIG 312

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
             DL   +W  S WRS+++ WDE ++ +R  +VS WEIEP +   + P+
Sbjct: 313 SGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 360



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 461 DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 518

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F      + I   ++V+K
Sbjct: 519 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 576

Query: 779 M 779
           M
Sbjct: 577 M 577


>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
          Length = 695

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 188/380 (49%), Positives = 252/380 (66%), Gaps = 19/380 (5%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           GD+  L +ELW  CAGPLV +P  G +V YFPQGH EQ+ ++TN+E++  IP + NLP +
Sbjct: 19  GDD--LYTELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESSTNQELNQQIPLF-NLPSK 75

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           ++C + ++ + A+ ETDEVYAQ+TL P + + +  +  P +   P K   ++FCK LTAS
Sbjct: 76  ILCSVVHIRLLAEQETDEVYAQITLHPEADQCEPSSPDPCKPEAP-KATVHWFCKILTAS 134

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV R+ A +  P LD +   P QELIA+DLH  EWKF+HIFRGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVLRKHATECLPPLDMNQATPTQELIAKDLHGYEWKFKHIFRGQPRRHLLTT 194

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWS FV++KRLVAGD+ +F+  +  +L  G+RR  R  + +PSSV+SS SMH+G+LA A+
Sbjct: 195 GWSTFVTSKRLVAGDAFVFLRGDNGELRAGVRRLARQQSQIPSSVISSQSMHLGVLATAS 254

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA  T + F V+  PR   S+F+I L+KY++A   T+ S+G RFRM FE +ES  RR+ G
Sbjct: 255 HALMTKTLFVVYSKPRT--SQFIIGLSKYLEAT-KTKFSLGTRFRMRFEGDESPERRFTG 311

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF-------PMYPS 367
           TI  + DL P +WS S WRS+KV WDE  A +R  RVS W+IEP           PM  S
Sbjct: 312 TIVEVGDLSP-QWSESKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASAPSNLAQPMVKS 370

Query: 368 LFPLRLKRPWHPSTSSFNDN 387
             P    RP   S+S    N
Sbjct: 371 KRP----RPVEISSSEVTTN 386



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 3/100 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TRT  KV   G +VGR++D++    Y+ L +EL +MF I+G+     ++ W +VF D EN
Sbjct: 579 TRTRTKVQMQGVAVGRAVDLTALKGYDHLIDELEKMFEIKGELRP--KNKWAVVFTDDEN 636

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFS 788
           D++L+GDD W  F   V  I I S ++VQKM    ++S S
Sbjct: 637 DMMLMGDDQWPDFCKLVKKIFIYSSDEVQKMNRCKLQSSS 676


>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
           [Arabidopsis thaliana]
          Length = 601

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 242/349 (69%), Gaps = 7/349 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 78
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+  VD  IP + NLPP+++C+
Sbjct: 18  LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  L  P+K   + F K LTASDTST
Sbjct: 77  VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKPAVDSFVKILTASDTST 135

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 136 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FV++KRLVAGD+ +F+  E   L +G+RR  +  + MP+SV+SS SM +G+LA A+HA  
Sbjct: 196 FVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 255

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F VF+ PR   S+F+I + KY+ A+     S+GMR+RM FE EES  R + GTI G
Sbjct: 256 TTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIG 312

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
             DL   +W  S WRS+++ WDE ++ +R  +VS WEIEP +   + P+
Sbjct: 313 SGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 360



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 461 DSNISDSTTKCHDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 518

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F      + I   ++V+K
Sbjct: 519 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 576

Query: 779 M 779
           M
Sbjct: 577 M 577


>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
 gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
           [Arabidopsis thaliana]
 gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
           [Arabidopsis thaliana]
 gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
 gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 622

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 242/349 (69%), Gaps = 7/349 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 78
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+  VD  IP + NLPP+++C+
Sbjct: 39  LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 97

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  L  P+K   + F K LTASDTST
Sbjct: 98  VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKPTVDSFVKILTASDTST 156

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 157 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 216

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FV++KRLVAGD+ +F+  E   L +G+RR  +  + MP+SV+SS SM +G+LA A+HA  
Sbjct: 217 FVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 276

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F VF+ PR   S+F+I + KY+ A+     S+GMR+RM FE EES  R + GTI G
Sbjct: 277 TTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIG 333

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
             DL   +W  S WRS+++ WDE ++ +R  +VS WEIEP +   + P+
Sbjct: 334 SGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 381



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 482 DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 539

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F      + I   ++V+K
Sbjct: 540 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 597

Query: 779 M 779
           M
Sbjct: 598 M 598


>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
 gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
          Length = 713

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 185/357 (51%), Positives = 241/357 (67%), Gaps = 25/357 (7%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH--IPNYPNLPPQLICQLH 80
           ELWHACAGPL SLP  G  VVYFPQGH EQ+A+++     SH  +PN+ +L PQ+ C++ 
Sbjct: 41  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQLASSSPF---SHRDMPNF-DLHPQIFCKVV 96

Query: 81  NVTMHADVETDEVYAQMTLQPLSPE------EQKDTFVPIELGI--------PSKQPTNY 126
           NV + A+ E DEVY ++TL P  PE      E K+     ELG+        P+K   + 
Sbjct: 97  NVQLLANRENDEVYTRLTLLP-QPEVVGQDLEGKEL---QELGVDGEGDDASPTKSTPHM 152

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           FCKTLTASDTSTHGGFSVPRRAAE  FPSLD+  Q P+QEL+A+DLH VEW+FRHI+RGQ
Sbjct: 153 FCKTLTASDTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQ 212

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 246
           P+RHLLTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA RP   +P SV    +  
Sbjct: 213 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAARPRNGLPDSVTGKQNSL 272

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
              L+  ++A +T S FTV ++PRA+ + FV+P  KY+K++ +  V +G RF+M FE ++
Sbjct: 273 PSALSLVSNAISTKSVFTVSYSPRATHAVFVVPYQKYIKSITNA-VCIGTRFKMRFEMDD 331

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           S  RR  G +TG +DLDP +W NS WR + V WDE    + Q RVS WEI+   + P
Sbjct: 332 SPERRCSGVVTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEIDASVSLP 388



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           D  F+ +  GC      L        Q T  R+  KV+K GS VGR++D+SR + Y++L 
Sbjct: 564 DDFFNGNATGCKLFGFSLNAETSPNSQNTSKRSCTKVHKQGSLVGRAIDLSRLNGYSDLL 623

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
            EL ++F +EG   +P   GW++++ D ENDV+++GDDPW  F +    I I + E+V+K
Sbjct: 624 NELERLFSMEGLLRNP-EEGWRILYTDSENDVMVVGDDPWLEFCNVATKIHIYTQEEVEK 682

Query: 779 M 779
           M
Sbjct: 683 M 683


>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
 gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
          Length = 730

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 189/370 (51%), Positives = 239/370 (64%), Gaps = 29/370 (7%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 74
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ            +P+ P    +LP  
Sbjct: 51  CL--ELWHACAGPLISLPKKGSVVVYFPQGHLEQ------------LPDLPLAVYDLPSY 96

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE-EQKDTFVPIE--------LGIPSKQPTN 125
           + C++ +V +HA+   DEVYAQ++L P S + EQK     +E          +     T+
Sbjct: 97  IFCRVVDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVEAVVKSTTTH 156

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+RG
Sbjct: 157 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHIYRG 216

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA +         L S  +
Sbjct: 217 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCSQQL 276

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           +   L    HA +  S F + +NPRAS SEF+IPL K++K++ ++  SVGMRF+M FETE
Sbjct: 277 NQSTLTDVVHAMSMRSLFNICYNPRASSSEFIIPLHKFLKSLDYS-FSVGMRFKMRFETE 335

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           +++ RRYMG ITGISDLDP RW  S WR + V WD+     R  RVS WEIEP  +    
Sbjct: 336 DAAERRYMGLITGISDLDPARWPGSKWRCLVVRWDDMET-NRHSRVSPWEIEPSGSVSSC 394

Query: 366 PSLFPLRLKR 375
            S     LKR
Sbjct: 395 NSFMTPGLKR 404


>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
 gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
          Length = 405

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 179/359 (49%), Positives = 244/359 (67%), Gaps = 6/359 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+TN+E++  IP + NL P+++C++
Sbjct: 28  LCQELWRLCAGPLVDVPKNEERVYYFPQGHMEQLEASTNQELNQSIPLF-NLQPKILCRV 86

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            ++ + A+ ++DEVYAQ+ L P   ++ + T   + L  P +   ++FCK LTASDTSTH
Sbjct: 87  LHIQLLAEQDSDEVYAQIALLP-EADQVEPTSPDLSLPEPPRPKVHFFCKVLTASDTSTH 145

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFS+ R+ A +  P LD +   PAQEL+A+DLH  EW F+HIFRGQP+RHLLTTGWS F
Sbjct: 146 GGFSILRKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRRHLLTTGWSTF 205

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+KRLV GDS +F+ + K ++ +GIRR  R P+ MP SV+SS SMH+G+LA A+HA  T
Sbjct: 206 VSSKRLVTGDSFVFLRSGKGEVRIGIRRLARQPSSMPQSVISSQSMHLGVLATASHAVTT 265

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F V++ PR   S+F+I L KY++AV H R SVGMRF+M FE EE   +R+ GTI G+
Sbjct: 266 QTMFVVYYKPRT--SQFIIGLNKYLEAVKH-RYSVGMRFKMKFEGEEIPEKRFTGTIVGV 322

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
            D    +W +S WRS+KV WDE  +  R  RVS W+IEP       P + P+ +K   H
Sbjct: 323 ED-SSSQWKDSKWRSLKVQWDEPASVPRPDRVSPWDIEPFVASVATPLVPPMGVKNKRH 380


>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
          Length = 559

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 237/349 (67%), Gaps = 7/349 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 78
           L  ELW ACAGPLV +P  G RV YFPQGH EQ+ A TN+  VD  IP++ NLPP+++C+
Sbjct: 18  LYMELWKACAGPLVEVPRYGERVFYFPQGHMEQLVALTNQGVVDQEIPDF-NLPPKILCR 76

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + +V + A+ ETDEVYAQ+TLQP   + +  +  P  L  P+KQ  + F K LTASDTST
Sbjct: 77  VLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKQSVDSFVKILTASDTST 135

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  PSLD       QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 136 HGGFSVLRKHATECLPSLDMRQPTQTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FV++KRLVAGD+ +F+  +   L +G+RR  R  + MP+SV+SS SMH+G+LA A+HA  
Sbjct: 196 FVTSKRLVAGDAFVFLRGQTGDLRVGVRRLARQQSTMPASVISSQSMHLGVLATASHAVN 255

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F VF+ PR   S+F+I + KY+ A       +GMRFRM FE EES  R + GTI G
Sbjct: 256 TKTLFVVFYKPRI--SQFIIGVNKYM-AAMKIGFPIGMRFRMRFEGEESPERIFTGTIVG 312

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
             DL   +W  S WRS+++ WDE +  +R  +VS WEIEP +   + P+
Sbjct: 313 TGDLSS-QWPASKWRSLQIQWDEPSTVQRPNKVSTWEIEPFSPSVLTPT 360



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 7/91 (7%)

Query: 664 HNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELG 722
           +NS     QD + L        Q T TR+  KV K G+ VGR++D++   SY+EL  EL 
Sbjct: 475 NNSGSAKCQDPNSLTEQ----KQQTSTRSRTKVQKQGTAVGRAVDLTLLRSYDELINELE 530

Query: 723 QMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 753
           +MF I+G+     +  W +VF D E D++L+
Sbjct: 531 KMFEIDGELSP--KDKWAIVFTDDEGDMMLV 559


>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
          Length = 613

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 190/381 (49%), Positives = 253/381 (66%), Gaps = 23/381 (6%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 78
           L +ELW  CAGPLV +P    RV YFPQGH EQ+ A+TN+ ++S  IP + +LPP+++C+
Sbjct: 22  LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  +G P+KQ  + F K LTASDTST
Sbjct: 81  VLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVG-PTKQEFHSFVKILTASDTST 139

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  PSLD +   P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E   L +G+RR  R  + MP+SV+SS SMH+G+LA A+HA  
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR-------- 310
           T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES  R        
Sbjct: 260 TTTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIVLDSETW 316

Query: 311 ---RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM-Y 365
              R+ GTI G  DL   +W  S WRS++V WDE T  +R  +VS WEIEP L T P+  
Sbjct: 317 NVFRFTGTIVGSGDLS-SQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIST 375

Query: 366 PSLFP---LRLKRPWHPSTSS 383
           P+  P    +  RP  PS  +
Sbjct: 376 PAQQPQSKCKRSRPIEPSVKT 396



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 499 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 556

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L GDDPW  F      I I S ++V+KM
Sbjct: 557 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 587


>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
          Length = 802

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 185/373 (49%), Positives = 240/373 (64%), Gaps = 32/373 (8%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP------NLPPQLI 76
           ELWHACAGPL SLP  G  VVYFPQGH EQ+A+ +        P  P      +L P ++
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASAS--------PFSPMEMRTFDLQPHIL 105

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--------------GIPSKQ 122
           C++ NV + A+ E DEVY Q+TL+PL PE         EL              G P++ 
Sbjct: 106 CRVINVHLLANKENDEVYTQLTLRPL-PELLGTGVAGKELEELALNGADGDGSGGSPTRS 164

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
             + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++   P+QELIA+DLH VEW+FRHI
Sbjct: 165 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHI 224

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQP+RHLLTTGWS+FVS K L++GD+VLF+  E  +L LGIRRA+RP   +P S++ +
Sbjct: 225 YRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGN 284

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
            +     LA    A +T S F VF+NPRA  ++F+I   KYVK++ +  VSVG RF+M F
Sbjct: 285 QNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSI-NNPVSVGTRFKMRF 343

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           E ++S  RR+ G + GISD+D  RW NS WR + V WD+ +  + Q RVS WEI+P  + 
Sbjct: 344 EMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDS--DHQERVSPWEIDPSVSL 401

Query: 363 PMYPSLFPLRLKR 375
           P        RLK+
Sbjct: 402 PPLSVQSSPRLKK 414



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           D   +++  GC      L        Q +  R+  KV+K GS VGR++D+SR + Y +L 
Sbjct: 643 DEHVNDNATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLI 702

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
            EL ++F +EG  +DP + GW++++ D ENDV+++GD PW  F   V  I I + E+V+K
Sbjct: 703 SELERLFSMEGLLKDPDK-GWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEK 761

Query: 779 M 779
           M
Sbjct: 762 M 762


>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
 gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
          Length = 694

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 191/374 (51%), Positives = 258/374 (68%), Gaps = 15/374 (4%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           +G  GD+  L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E++  +P + N
Sbjct: 15  EGSCGDD--LYTELWKACAGPLVDVPKDGERVFYFPQGHMEQLEASTNQELNQRVPLF-N 71

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCK 129
           LP +++C++ N+ + A+ +TDEVYAQ+TL P S + +  +  P     PS++P  + FCK
Sbjct: 72  LPSKILCRVINIHLLAEQDTDEVYAQITLLPESDQTEPTSPDP-SPAEPSRRPAVHSFCK 130

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
            LTASDTSTHGGFSV R+ A +  P LD +   P QEL+A+DLH  EW+F+HIFRGQP+R
Sbjct: 131 VLTASDTSTHGGFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRR 190

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS FV++KRLVAGDS +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+
Sbjct: 191 HLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSQSMHLGV 250

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LA A+HA AT + F V++ PR   S+F+I L KY++A+ + + SVGMRF+M FE E+S  
Sbjct: 251 LATASHAVATQTLFVVYYKPRT--SQFIISLNKYLEAI-NNKFSVGMRFKMRFEGEDSPE 307

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RR+ GTI G+ D  P  W +S WR +KV WDE  +  R  +VS WEIEP +     PS  
Sbjct: 308 RRFSGTIVGVEDFSP-HWLDSKWRQLKVQWDEPASIPRPDKVSPWEIEPFSA--SAPSNI 364

Query: 370 ----PLRLKRPWHP 379
               PL+ KRP  P
Sbjct: 365 SQPVPLKNKRPRPP 378



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV   G +VGR++D++    YN+L +EL +MF I+G+     R  W++V+ D E 
Sbjct: 581 TRSRTKVQMQGVAVGRAIDLTMIKGYNQLLDELEEMFDIKGQLHP--RDKWEIVYTDDEG 638

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 639 DMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 669


>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
          Length = 722

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 178/351 (50%), Positives = 240/351 (68%), Gaps = 8/351 (2%)

Query: 10  QQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP 69
           ++G + D+  L  ELW  CAGPLV +P  G RV YFPQGH EQ+ A+T++E++  IP++ 
Sbjct: 20  EKGLKDDD--LYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQASTDQELNQEIPHF- 76

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCK 129
           NLP ++ C++ N+ + A+ +TDEVYA + L P S + +     P     P KQ  + FCK
Sbjct: 77  NLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNVSEAP-KQKFHSFCK 135

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
            LTASDTSTHGGFSV R+ A +  P LD +   P QEL A+DLH  EWKF+HI+RGQP+R
Sbjct: 136 ILTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKHIYRGQPRR 195

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS FV++KRLVAGD+ +F+  E  QL +G+RR  R  + MPSSV+SS SMH+G+
Sbjct: 196 HLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGV 255

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LA A+HA  T + F V++ PR   S+F++ L KY++AV + + S+ MRF+M FE ++S  
Sbjct: 256 LATASHAVMTRTMFLVYYKPRT--SQFIVGLNKYLEAV-NNKFSLSMRFKMRFEGDDSPE 312

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           RR+ GTI G+ D+    WSNS WRS+KV WDE     R  RVS WEIEP  
Sbjct: 313 RRFSGTIVGVGDVS-AGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFV 362



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           RT  KV   G +VGR+ D++  S Y++L +EL ++F I G+     +  W + F D END
Sbjct: 602 RTRTKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFEIRGELRS--QDKWAVTFTDDEND 659

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L GDDPW  F + V  I I S ED++KM
Sbjct: 660 MMLAGDDPWPEFCNMVKRIFICSREDLKKM 689


>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 662

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 178/340 (52%), Positives = 240/340 (70%), Gaps = 6/340 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L ++LW  CAGPLV +P  G RV YFPQGH EQ+ A+TN+ ++  IP++ NLPP+++C++
Sbjct: 9   LYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQGLNQEIPHF-NLPPKILCRV 67

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            ++ + A+ ETDEVYA++TL P S +E+  +  P       KQ  + F K LTASDTSTH
Sbjct: 68  VHIQLLAEQETDEVYARITLLPESNQEEPTSPDPSPPET-QKQVFHTFSKILTASDTSTH 126

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR A +  P LD +   P+QEL+A DLH  EWKF+HIFRGQP+RHLLTTGWS F
Sbjct: 127 GGFSVLRRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQPRRHLLTTGWSTF 186

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           V++K+LVAGD+ +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA  T
Sbjct: 187 VTSKKLVAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHLGVLATASHAFLT 246

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
           ++ F V++ PR   S+F+I + KY++A  + + SVGMRF+M FE E+S  RR+ GTI G+
Sbjct: 247 STMFVVYYKPRT--SQFIIGVNKYLEAE-NNKFSVGMRFKMRFEVEDSPERRFSGTIVGV 303

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
            D+ P  W NS WRS+KV WDE     R  RVS WEIEP 
Sbjct: 304 GDVSP-GWWNSQWRSLKVQWDEPAIIPRPERVSSWEIEPF 342



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TRT  KV   G +VGR++D++    Y++L +EL +MF I+G+ +  +++ W + F D  N
Sbjct: 555 TRTRTKVQMQGIAVGRAVDLTVLKDYDDLIDELEKMFDIKGELQ--MQTKWAITFTDDGN 612

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           D++L+GDDPW  F + V  I I S EDV
Sbjct: 613 DMMLVGDDPWPEFCTVVKRIFICSREDV 640


>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
 gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
          Length = 733

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 182/361 (50%), Positives = 236/361 (65%), Gaps = 32/361 (8%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP------NLPPQLI 76
           ELWHACAGPL SLP  G  VVYFPQGH EQ+A+ +        P  P      +L P ++
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASAS--------PFSPMEMRTFDLQPHIL 105

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--------------GIPSKQ 122
           C++ NV + A+ E DEVY Q+TL+PL PE         EL              G P++ 
Sbjct: 106 CRVINVHLLANKENDEVYTQLTLRPL-PELLGTGVAGKELEELALNGADGDGSGGSPTRS 164

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
             + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++   P+QELIA+DLH VEW+FRHI
Sbjct: 165 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHI 224

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQP+RHLLTTGWS+FVS K L++GD+VLF+  E  +L LGIRRA+RP   +P S++ +
Sbjct: 225 YRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGN 284

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
            +     LA    A +T S F VF+NPRA  ++F+I   KYVK++ +  VSVG RF+M F
Sbjct: 285 QNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSI-NNPVSVGTRFKMRF 343

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           E ++S  RR+ G + GISD+D  RW NS WR + V WD+ +  + Q RVS WEI+P  + 
Sbjct: 344 EMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDS--DHQERVSPWEIDPSVSL 401

Query: 363 P 363
           P
Sbjct: 402 P 402



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           D   +++  GC      L        Q +  R+  KV+K GS VGR++D+SR + Y +L 
Sbjct: 574 DEHVNDNATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLI 633

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
            EL ++F +EG  +DP + GW++++ D ENDV+++GD PW  F   V  I I + E+V+K
Sbjct: 634 SELERLFSMEGLLKDPDK-GWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEK 692

Query: 779 M 779
           M
Sbjct: 693 M 693


>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
          Length = 733

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 185/373 (49%), Positives = 240/373 (64%), Gaps = 32/373 (8%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP------NLPPQLI 76
           ELWHACAGPL SLP  G  VVYFPQGH EQ+A+ +        P  P      +L P ++
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASAS--------PFSPMEMRTFDLQPHIL 105

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--------------GIPSKQ 122
           C++ NV + A+ E DEVY Q+TL+PL PE         EL              G P+K 
Sbjct: 106 CRVINVHLLANKENDEVYTQLTLRPL-PELLGTGVAGKELEELALNGADGDGSGGSPTKS 164

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
             + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++   P+QELIA+DLH VEW+FRHI
Sbjct: 165 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHI 224

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RGQP+RHLLTTGWS+FVS K L++GD+VLF+  E  +L LGIRRA+RP   +P S++ +
Sbjct: 225 YRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGN 284

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
            +     LA    A +T S F VF+NPRA  ++F+I   KYVK++ +  VSVG RF+M F
Sbjct: 285 QNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSI-NNPVSVGTRFKMRF 343

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           E ++S  R++ G + GISD+D  RW NS WR + V WD+ +  + Q RVS WEI+P  + 
Sbjct: 344 EMDDSPERKFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDS--DHQERVSPWEIDPSVSL 401

Query: 363 PMYPSLFPLRLKR 375
           P        RLK+
Sbjct: 402 PPLSVQSSPRLKK 414



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           D   +++  GC      L        Q +  R+  KV+K GS VGR++D+SR + Y +L 
Sbjct: 574 DEHVNDNATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLI 633

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
            EL ++F +EG  +DP + GW++++ D ENDV+++GD PW  F   V  I I + E+V+K
Sbjct: 634 SELERLFSMEGLLKDPDK-GWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEK 692

Query: 779 M 779
           M
Sbjct: 693 M 693


>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 692

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 189/373 (50%), Positives = 255/373 (68%), Gaps = 11/373 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G  G+++ L  + W ACAGPLV +P VG RV YFPQGH EQ+ A+TN+E++  IP    L
Sbjct: 14  GESGEDE-LYEQQWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-LLKL 71

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           P +++C++ NV + A+ ETDEVYAQ+TL P S +++     P     P + P + F K L
Sbjct: 72  PTKILCRVVNVHLLAEQETDEVYAQITLVPESSQDEPTNADPC-TAEPPRAPVHSFSKVL 130

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV R+ A +  P LD S   P QEL+A+DLH  EW+F+HIFRGQP+RHL
Sbjct: 131 TASDTSTHGGFSVLRKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 190

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS FV++KRLVAGD+ +F+  +  +L +G+RR  R  + MPSSV+SS SMH+G+LA
Sbjct: 191 LTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLA 250

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV-- 309
            A+HA AT + F V++ PR   S+F+I + KY++A+   + SVGMRF+M FE ++S+   
Sbjct: 251 TASHAVATQTLFVVYYKPRT--SQFIIGVNKYLEAM-DKKFSVGMRFKMRFEGDDSAETD 307

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           +R+ GTI G+ D+ P  W NS WRS+KV WDE  A  R  RVS WEIEP       PS+ 
Sbjct: 308 KRFSGTIVGVEDISP-HWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQ 366

Query: 370 P--LRLKRPWHPS 380
           P  ++ KRP  PS
Sbjct: 367 PTMVKTKRPRPPS 379



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 8/131 (6%)

Query: 654 SSMPLGDSGFHN--SMYGCMQDSSELLH---NVGQIDQLTPTRTFVKVYKSGSVGRSLDI 708
           S++   D+G  +  SM   M+   E L       Q  Q+  +RT V++ +  +VGR++D+
Sbjct: 541 STLSRTDAGHKSDVSMASSMERKQEQLQVSPKDTQSKQICRSRTKVQM-QGVAVGRAVDL 599

Query: 709 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 768
           +    Y +L  EL  MF I+G+ +   R+ W++VF D E D++L+GDDPW  F + V  I
Sbjct: 600 TMLDGYGQLINELEDMFNIKGQLQH--RNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRI 657

Query: 769 KILSPEDVQKM 779
            I S +DV+KM
Sbjct: 658 FICSSQDVKKM 668


>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 608

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 191/378 (50%), Positives = 252/378 (66%), Gaps = 23/378 (6%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 78
           L +ELW  CAGPLV +P    RV YFPQGH EQ+ A+TN+ + S  IP + +LPP+++C+
Sbjct: 22  LYTELWKVCAGPLVEVPRADERVFYFPQGHMEQLVASTNQGIKSEEIPVF-DLPPKILCR 80

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           +  +T+ A+ ETDEVYAQ+TLQP   + +  +  P  L  P+KQ  + F K LTASDTST
Sbjct: 81  VLGITLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPTKQMFHSFVKILTASDTST 139

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  P+LD +   P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 140 HGGFSVLRKHATECLPALDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLVAGD+ +F+  E   L +G+RR  R  + MP+SV+SS SMH+G+LA A+HA  
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES----------- 307
           T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES           
Sbjct: 260 TTTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIVLDSETW 316

Query: 308 SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM-Y 365
           SV R+ GTI G  DL   +W  S WRS++V WDE T  +R  +VS WEIEP L T P+  
Sbjct: 317 SVFRFTGTIVGTGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIST 375

Query: 366 PSLFP-LRLK--RPWHPS 380
           P+  P L+ K  RP  PS
Sbjct: 376 PAQQPQLKCKRSRPTEPS 393



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 3/92 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL EEL +MF I+G+     R  W +VF D E 
Sbjct: 502 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIEELEEMFEIQGQLRP--RDKWIVVFTDDEG 559

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           D++L GDDPW  F      I I S ++V+KM 
Sbjct: 560 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMA 591


>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 185/381 (48%), Positives = 245/381 (64%), Gaps = 5/381 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           + L   GL  +  + +N  L +ELW  CAGPLV++   G +VVYFPQGH EQV A TN++
Sbjct: 12  VDLEGDGLQSKNIQDENDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQD 71

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
               +P Y NLP ++ C++  V + A+  TDEV+AQ+TL P + +E +          P 
Sbjct: 72  GQMEMPIY-NLPSKIFCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDHGNSQFFPR 130

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +  +  F KTLT SDT+THGGFSVP+R A++  P LD + QPP QELIA+DLH  EW+FR
Sbjct: 131 RTHSYSFSKTLTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFR 190

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLT+GWS FV++K+LVAGD+ +F+     +L +G+RRA R    + +SVL
Sbjct: 191 HIFRGQPKRHLLTSGWSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVL 250

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           S  SM  G+LA+A HA +T + FTV+F P  SP EF+IP  +Y+K+      SVG RFRM
Sbjct: 251 SGHSMQHGILASAFHAISTGTMFTVYFRPWTSP-EFIIPYDQYIKSA-ENNYSVGTRFRM 308

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFE EE S +R  GTI GI D+D +RW NS WR  KV WD S       RV+ W IEP+ 
Sbjct: 309 LFEGEECSQQRCAGTIVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIE 368

Query: 361 TF-PMYPSLFP-LRLKRPWHP 379
                + S+ P L+  RP  P
Sbjct: 369 FIKKKHTSILPQLKRARPTDP 389



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV K G+ +GRS+D++RF  Y+EL  EL QMF   G   D     W + + D E 
Sbjct: 601 VRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDG-SCRWHVTYTDDEG 659

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++LLGD PW+ F S V  I I   E+ +++
Sbjct: 660 DMMLLGDYPWQEFRSMVQRIFICPKEETERL 690


>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 584

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 182/362 (50%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELW ACAGPLV +P V  RV YFPQGH EQ+ A+TN E++  IP + NL  +++C++
Sbjct: 24  LYMELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRIPLF-NLDSKILCRV 82

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            ++   AD E+DEVYAQ+TL P S + +  + +      P +   + FCK LTASDTSTH
Sbjct: 83  IHIEPLADHESDEVYAQITLMPESNQNEPKS-MDPCPPEPPRPVVHSFCKVLTASDTSTH 141

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV R+ A +  P LD +L  P Q+L+A+DLH  EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 142 GGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 201

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           V++KRL AGDS +F+  +  +L +G+RR  R  + MP SV+SS SMH+G+LA A+HA  T
Sbjct: 202 VTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTT 261

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F V++ PR    +F+I L KY++AV + + SVGMRF M FE E+S  RR+ GTI G 
Sbjct: 262 QTRFVVYYKPRT--CQFIISLNKYLEAV-NNKFSVGMRFNMSFEGEDSPERRFSGTIIGA 318

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP-LRLKRPWH 378
            D+ P  W NS WRS++V WDE T+  R  RVS W+IEPLT+  +     P  + KRP  
Sbjct: 319 VDISP-HWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPXFKNKRPRQ 377

Query: 379 PS 380
           P+
Sbjct: 378 PT 379


>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
          Length = 801

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 185/381 (48%), Positives = 245/381 (64%), Gaps = 5/381 (1%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           + L   GL  +  + +N  L +ELW  CAGPLV++   G +VVYFPQGH EQV A TN++
Sbjct: 117 VDLEGDGLQSKNIQDENDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQD 176

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
               +P Y NLP ++ C++  V + A+  TDEV+AQ+TL P + +E +          P 
Sbjct: 177 GQMEMPIY-NLPSKIFCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDHGNSQFFPR 235

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           +  +  F KTLT SDT+THGGFSVP+R A++  P LD + QPP QELIA+DLH  EW+FR
Sbjct: 236 RTHSYSFSKTLTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFR 295

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HIFRGQPKRHLLT+GWS FV++K+LVAGD+ +F+     +L +G+RRA R    + +SVL
Sbjct: 296 HIFRGQPKRHLLTSGWSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVL 355

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           S  SM  G+LA+A HA +T + FTV+F P  SP EF+IP  +Y+K+      SVG RFRM
Sbjct: 356 SGHSMQHGILASAFHAISTGTMFTVYFRPWTSP-EFIIPYDQYIKSA-ENNYSVGTRFRM 413

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           LFE EE S +R  GTI GI D+D +RW NS WR  KV WD S       RV+ W IEP+ 
Sbjct: 414 LFEGEECSQQRCAGTIVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIE 473

Query: 361 TF-PMYPSLFP-LRLKRPWHP 379
                + S+ P L+  RP  P
Sbjct: 474 FIKKKHTSILPQLKRARPTDP 494



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
            R+  KV K G+ +GRS+D++RF  Y+EL  EL QMF   G   D     W + + D E 
Sbjct: 706 VRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDG-SCRWHVTYTDDEG 764

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++LLGD PW+ F S V  I I   E+ +++
Sbjct: 765 DMMLLGDYPWQEFRSMVQRIFICPKEETERL 795


>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 691

 Score =  351 bits (901), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 192/393 (48%), Positives = 263/393 (66%), Gaps = 14/393 (3%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G+ G+++ +   LW  CAGPLV +P VG RV YFPQGH EQ+ A+TN+E++  IP    L
Sbjct: 14  GYSGEDE-MYEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-LLKL 71

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
           P +++C++ NV + A+ ETDEVYAQ+TL P S +++     P     P + P + F K L
Sbjct: 72  PTKILCRVVNVHLLAEQETDEVYAQITLVPESNQDEPMNPDPC-TAEPPRAPVHSFSKVL 130

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV R+ A +  P+LD S   P QEL+A+DLH  EW+F+HIFRGQP+RHL
Sbjct: 131 TASDTSTHGGFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 190

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS FV++KRLVAGD+ +F+  +  +L +G+RR  R  + MPSSV+SS SMH+G+LA
Sbjct: 191 LTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLA 250

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV-- 309
            A+HA AT + F V++ PR   S+F+I + KY++A+   R SVGMR +M FE ++S+   
Sbjct: 251 TASHAVATQTLFVVYYKPRT--SQFIISVNKYLEAM--NRFSVGMRLKMRFEGDDSAETD 306

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           +R+ GTI G+ D+ P  W NS WRS+KV WDE  A  R  RVS WEIEP       PS+ 
Sbjct: 307 KRFSGTIVGVEDISP-HWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQ 365

Query: 370 P--LRLKRPWHPSTSSFNDNRDETASGLNWLRG 400
           P  ++ KRP  PS +   D    +A+ + W  G
Sbjct: 366 PTMVKTKRPRPPSETPDVDT--TSAASVFWDAG 396



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 3/97 (3%)

Query: 683 QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 742
           Q  Q+  +RT V++ +  +VGR++D++    Y++L  EL +MF I+G+ +   R+ W++V
Sbjct: 574 QSKQICRSRTKVQM-QGVAVGRAVDLTMLDGYDQLINELEEMFDIKGQLQH--RNKWEIV 630

Query: 743 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           F D E D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 631 FTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 667


>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 600

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 179/349 (51%), Positives = 239/349 (68%), Gaps = 7/349 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 78
           L SELW ACAGPLV +P    RV YFPQGH EQ+ A+TN+  VD  IP + NLPP+++C+
Sbjct: 18  LYSELWKACAGPLVEVPRSNERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + +V + A+ ETDEVYAQ+TLQP   + +  +  P  L  P+K   + F K LTASDTST
Sbjct: 77  VLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKPTVDSFVKILTASDTST 135

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 136 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FV++KRLVAGD+ +F+  +   L +G+RR  +  + MP+SV+SS SM +G+LA A+HA  
Sbjct: 196 FVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 255

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F VF+ PR   S+F+I + KY+ A+     S+GMRFRM FE EES  R + GTI G
Sbjct: 256 TTTIFVVFYKPRI--SQFIISVNKYMVAM-KNGFSLGMRFRMRFEGEESPERIFTGTIVG 312

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
             DL   +W  S WRS+++ WDE ++  R  +VS WEIEP +   + P+
Sbjct: 313 SGDLSS-QWPASKWRSLQIQWDEPSSIPRPNKVSPWEIEPFSPSALTPT 360



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 5/126 (3%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 460 DSNISDSTPKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 517

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
           +EL +MF IEG+     +  W +VF D E D++L+GDDPW  F      + I   ++V+K
Sbjct: 518 KELEKMFEIEGELSP--KDKWTIVFTDDEGDMMLVGDDPWNEFCKMAKKLFIYPSDEVKK 575

Query: 779 MGEQGV 784
           +  + +
Sbjct: 576 LSSKSL 581


>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
 gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
          Length = 822

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 185/376 (49%), Positives = 240/376 (63%), Gaps = 26/376 (6%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGPL SLP  G  VVYFPQGH EQVA+ +       IP Y  L PQ++C++ NV
Sbjct: 56  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFS-SLEIPTY-GLQPQILCRVVNV 113

Query: 83  TMHADVETDEVYAQMTLQPLSP-------EEQKDTFVPIELG---IPSKQPTNYFCKTLT 132
            + A+ E DEVY Q+ L P +        +++ +     + G    P+K  ++ FCKTLT
Sbjct: 114 QLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLT 173

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG------- 185
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH V WKFRHI+RG       
Sbjct: 174 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETELL 233

Query: 186 -----QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
                QP+RHLLTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA RP   +P S++
Sbjct: 234 CWLDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESII 293

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
            + S     L++ A+A +  S F VF++PRAS ++FV+P  KY K++    V++G RF+M
Sbjct: 294 GNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSI-RNPVTIGTRFKM 352

Query: 301 LFETEESSVRRY-MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
            FE +ES  RR   G +TG+SDLDP +W  S WR + V WDE      Q RVS WEI+P 
Sbjct: 353 KFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPS 412

Query: 360 TTFPMYPSLFPLRLKR 375
           T+ P        RLK+
Sbjct: 413 TSLPPLNIQSSRRLKK 428



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q +  R+  KV+K GS VGR++D+SR SSYN+L  EL ++FG+EG   DP + GW++++ 
Sbjct: 689 QNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYT 747

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 748 DSENDIMVVGDDPWHEFCDMVSKIHIYTQEEVEKM 782


>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
 gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
          Length = 471

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 198/423 (46%), Positives = 264/423 (62%), Gaps = 38/423 (8%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN-KEVDSHIPNYPNLPPQLICQLHN 81
           ELWHACAGPL SLP  G  VVYFPQGH EQ A+ +  K+++  IPNY +L PQ+ C++ N
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQFASFSPFKQLE--IPNY-DLQPQIFCRVVN 110

Query: 82  VTMHADVETDEVYAQMTLQPLSP----------EEQKDTFVPIELGIPSKQPTNYFCKTL 131
           V + A+ E DEVY Q+TL P +            E+ +     + G P+K   + FCKTL
Sbjct: 111 VQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTL 170

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SDTSTHGGFSVPRRAAE  FP LD+ LQ P+QEL+A+DLH VEWKFRHI+RGQP+RHL
Sbjct: 171 TVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 230

Query: 192 LTTGWSVFVSAKRLVAGDSVLFI--------------WNEKNQLLLGIRRAIRPPTVMPS 237
           LTTGWS+FV+ K LV+GD+VLF+              W +  +L LGIRRA+RP   +P 
Sbjct: 231 LTTGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRRAVRPRNGLPE 290

Query: 238 SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
           S++ + + +   L++ A+A +T S F VF++PRAS +EFV+P  KYVK++    +++G R
Sbjct: 291 SIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSI-KNPMTIGTR 349

Query: 298 FRMLFETEESSVRRY-MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 356
           F+M  E +ES  RR   G + GI+DLDP RW  S WR + V WD+ T    Q RVS WEI
Sbjct: 350 FKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEI 409

Query: 357 EPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGE-QGLTTLNFQSL 415
           +P +  P        RLK+   P T     + +   +G+N      GE + L  LNF   
Sbjct: 410 DPSSPQPPLSIQSSPRLKK---PRTGLLVASPNHLITGMN----PNGEMECLLLLNFMYQ 462

Query: 416 GMF 418
            +F
Sbjct: 463 ALF 465


>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 669

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 185/368 (50%), Positives = 253/368 (68%), Gaps = 11/368 (2%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELW   AGPLV +P +  +V+YFPQGH EQ+ A+TN+E++  +P + NLP +++CQ+ + 
Sbjct: 1   ELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLF-NLPXKILCQVVDT 59

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVP--IELGIPSKQPTNYFCKTLTASDTSTHG 140
            + A+ ++DEVYAQ+TL P + +    TF P  IE     K   + FCK LTASDTSTHG
Sbjct: 60  RLLAEQDSDEVYAQITLMPEANQALPSTFEPPLIEC---RKTKVHSFCKVLTASDTSTHG 116

Query: 141 GFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFV 200
           GFSV R+ A +  P LD + Q P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS FV
Sbjct: 117 GFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 176

Query: 201 SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATN 260
           ++KRLVAGDS +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA +T 
Sbjct: 177 TSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQ 236

Query: 261 SCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 320
           + F V++ PRA  S+F++ L+KY++A+ + +  VGMRF+M FE EES  RR+ GTI G+ 
Sbjct: 237 TRFVVYYKPRA--SQFIVSLSKYMEAM-NNKFMVGMRFKMRFEGEESPERRFSGTIVGVD 293

Query: 321 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRPWHP 379
           D+ P  W NS WRS++V WDE  + +R  RVS WEIEP     P  P    ++ KRP  P
Sbjct: 294 DMSP-HWPNSEWRSLRVQWDELASIQRPDRVSPWEIEPFVAPTPSIPHSISVKNKRPRPP 352

Query: 380 STSSFNDN 387
                +DN
Sbjct: 353 LEIPDSDN 360



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 3/80 (3%)

Query: 701 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 760
           +VGR++D++    Y +L +EL +MF I+G+     R+ W++VF D E D++L+GD PW+ 
Sbjct: 569 AVGRAVDLTTLEGYGQLIDELEKMFDIKGELRP--RNKWEIVFTDDEGDMMLMGDYPWQE 626

Query: 761 FVSNVWYIKILSPEDVQKMG 780
           F + V  I I S +DV KMG
Sbjct: 627 FCNMVRRIYIWSSQDV-KMG 645


>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
          Length = 712

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/366 (49%), Positives = 236/366 (64%), Gaps = 22/366 (6%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGPL+SLP  GT VVY PQGH EQV+       D        LPP L C+
Sbjct: 39  CL--ELWHACAGPLISLPKKGTVVVYLPQGHLEQVSDFPTSAYD--------LPPHLFCR 88

Query: 79  LHNVTMHADVETDEVYAQMTLQP---------LSPEEQKDTFVPIELGIPSKQPTNYFCK 129
           + +V +HA+  TD+V+AQ++L P         L  E   D    +E    S  P + FCK
Sbjct: 89  VVDVKLHAESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKSTTP-HMFCK 147

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH +EW+FRHI+RGQP+R
Sbjct: 148 TLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQPRR 207

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA +  +      L S  ++   
Sbjct: 208 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQLNYST 267

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           +    +A +T + F V++NPRAS SEF+IP  K+++++ H   S GMRF+M FETE+++ 
Sbjct: 268 VTDVVNAVSTKNAFNVYYNPRASSSEFIIPSRKFLRSLDHC-FSAGMRFKMRFETEDAAE 326

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RRY G ITGI  LDP+RW  S W+ + V WD+     +  RVS WEIEP  +     SL 
Sbjct: 327 RRYTGLITGIGALDPIRWPGSKWKCLVVRWDDIDT-SKHGRVSPWEIEPSGSVSSSHSLM 385

Query: 370 PLRLKR 375
              LKR
Sbjct: 386 GTGLKR 391


>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
          Length = 718

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/350 (51%), Positives = 233/350 (66%), Gaps = 22/350 (6%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGPL+SLP  G+ VVY PQGH EQ         D  +  Y N+P  + C+
Sbjct: 47  CL--ELWHACAGPLISLPKKGSVVVYIPQGHFEQAQ-------DFPVTAY-NIPTHVFCR 96

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQK---------DTFVPIELGIPSKQPTNYFCK 129
           + +V +HA+  +DEVY Q+ L P S + +K         D     E  + S  P + FCK
Sbjct: 97  VLDVKLHAEEGSDEVYCQVLLIPESEQVEKNLGEGDTDADGEEDTEAMVKSTTP-HMFCK 155

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EWKFRHI+RGQP+R
Sbjct: 156 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRR 215

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA +  +V   +  S   +  G 
Sbjct: 216 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSVGSFAAPSGQHLSPGT 275

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           L   A+A ++   F+  +NPR S SEF+IP+ K++K++     SVGMRFRM FETE+S+ 
Sbjct: 276 LMDVANALSSRCAFSACYNPRVSSSEFIIPVNKFMKSL-DCSYSVGMRFRMRFETEDSAE 334

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           RR+ G + GISD+DPVRW  S WR + V WD+  AG R  RVS WEIEP 
Sbjct: 335 RRFTGLVLGISDVDPVRWPGSKWRCLLVRWDDIEAG-RHNRVSPWEIEPF 383


>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
          Length = 629

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 180/370 (48%), Positives = 243/370 (65%), Gaps = 21/370 (5%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP--NLPPQLICQLH 80
           ELW  CAGP+V +P    RV YFPQGH EQ+ A+T +++++  P  P  +LPP+++C++ 
Sbjct: 10  ELWKLCAGPVVDVPQAAERVFYFPQGHMEQLEASTQQDLNAVKPTKPLFDLPPKILCRVM 69

Query: 81  NVTMHADVETDEVYAQMTL-------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 133
           +V + A+ +TDEVYAQ+ L       +P+SP+       P E   P     + F K LTA
Sbjct: 70  DVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPS-----PPESQRPK---VHSFSKVLTA 121

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RHLLT
Sbjct: 122 SDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLT 181

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS FV+AKRLVAGD+ +F+  E  +L +G+RRA R  T MPSSV+SS SMH+G+LA A
Sbjct: 182 TGWSTFVTAKRLVAGDTFVFLRGENGELRVGVRRANRQQTNMPSSVISSHSMHLGVLATA 241

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
            HA  T S FTV++ PR   S+F+I L KY++A+   + SVG+RF+M FE E+S  RR+ 
Sbjct: 242 CHATQTRSMFTVYYKPRT--SQFIISLNKYLEAM-SNKFSVGIRFKMRFEGEDSPERRFS 298

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GT+ G+ D     W +S+WR ++V WDE  +  R  +VS WEIEP  T    P     + 
Sbjct: 299 GTVVGVKDCS-THWKDSNWRCLEVHWDEPASISRPDKVSPWEIEPFVTSENVPHSVMPKN 357

Query: 374 KRPWHPSTSS 383
           KRP H S  S
Sbjct: 358 KRPRHYSEVS 367



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 65/98 (66%), Gaps = 3/98 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  +++ TR+  KV   G  VGR++D++  + Y+EL ++L ++F IEG+ +   R+ W++
Sbjct: 505 QSKEISSTRSRTKVQMQGVPVGRAVDLTVLNGYSELIDDLEKLFDIEGELKS--RNQWEI 562

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 563 VFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 600


>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
          Length = 672

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 180/343 (52%), Positives = 243/343 (70%), Gaps = 5/343 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV+LP VG RV YFPQGH EQ+ A+ ++ ++  +P++ +LP +++C++
Sbjct: 19  LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSF-DLPSKILCKV 77

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASDTST 138
            +V   A+ +TDEVYAQ+TL P    +Q +   P + L  P +   + FCKTLTASDTST
Sbjct: 78  ASVQRKAEPDTDEVYAQITLVPEV--DQSEVMSPDDPLQEPERCIVHSFCKTLTASDTST 135

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A+   P LD + QPP QELIA DLH  EW FRHI RGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPRRHLLTTGWSV 195

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+K+LVAGD+++F+      L +G+RR +R    MPSSV+SS S+ +G+LA A++A +
Sbjct: 196 FVSSKKLVAGDALIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSIILGVLATASYALS 255

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T S F++F+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE   RR+ GTI G
Sbjct: 256 TRSMFSIFYKPRTSLSEFIVSVNKYLEARSH-KLSVGMRFKMRFEGEEVPERRFSGTIVG 314

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           +       W++S WRS+KV WDE ++  R  RVS WE+EPL  
Sbjct: 315 VEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVA 357



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 3/90 (3%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF  Y +L ++L  MF I+G+     ++ WQ+V+ D E+D
Sbjct: 546 RSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKN-WQVVYTDDEDD 604

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++++GDDPW  F S V  I I + E+V+K+
Sbjct: 605 MMMVGDDPWNEFCSMVRKI-IYTSEEVRKL 633


>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
          Length = 771

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 185/374 (49%), Positives = 240/374 (64%), Gaps = 27/374 (7%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGPL SLP  G  VVYFPQGH EQ AA+ +      +P Y +L PQ+ C++ NV
Sbjct: 44  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPLDVPTY-DLHPQIFCKVANV 101

Query: 83  TMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 132
            + A+ E DEVY Q+TL P        L  +E +     +E     P+K   + FCKTLT
Sbjct: 102 QLLANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGNGKTPAKSTPHMFCKTLT 161

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP L    Q P+QEL+A+DLH VEWKFRHI+RGQP+RHLL
Sbjct: 162 ASDTSTHGGFSVPRRAAEDCFPPL----QRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 217

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS+FVS K+LV+GD+VLF+  E  +L LGIRRA RP   +P S++ + S +   L++
Sbjct: 218 TTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPNFLSS 277

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            A+A +  S F VF++PRAS ++FV+P  KYV+++    V+VG RF+M F+ +ES  RR 
Sbjct: 278 VANAISARSMFHVFYSPRASHADFVVPYHKYVRSI-KNPVTVGTRFKMKFDMDESPERRS 336

Query: 313 M----------GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
                      G +TG+SDLDP +W  S WR + V WDE      Q RVS WE++P  + 
Sbjct: 337 TTAVTINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVDPSASL 396

Query: 363 PMYPSLFPLRLKRP 376
                    RLK+P
Sbjct: 397 SPLSIQASRRLKKP 410



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 647 TSVDPGVSSMPLGDSGFHNSMYGCMQDSSELL-HNVGQIDQLTPTRTFVKVYKSGS-VGR 704
           T+   G +   L D  F   +  C      L   +  Q  Q T  R+  KV+K GS VGR
Sbjct: 598 TAASLGANIRILNDDNFDGKVNACKLFGFPLSGESTSQNLQNTAKRSCTKVHKQGSLVGR 657

Query: 705 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 764
           ++D+SR SSYN+L  EL ++F +EG   +P + GW++++ DREND++++GDDPW  F + 
Sbjct: 658 AIDLSRLSSYNDLLSELERLFSMEGLLREPDK-GWRVLYTDRENDIMVVGDDPWHEFCNV 716

Query: 765 VWYIKILSPEDVQKM 779
           V  I I + E+V+KM
Sbjct: 717 VSKIHIYTQEEVEKM 731


>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
 gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
          Length = 575

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 187/361 (51%), Positives = 248/361 (68%), Gaps = 14/361 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E++  +P + NLP +++C++
Sbjct: 17  LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLF-NLPSKILCRV 75

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASDTST 138
            N  + A+ ETDEVYAQ+TL P S  +Q +T  P        +PT + FCK LTASDTST
Sbjct: 76  INTQLLAEQETDEVYAQITLLPES--DQIETTSPDPCPSEPPRPTVHSFCKVLTASDTST 133

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  P LD     P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 134 HGGFSVLRKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 193

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FV++KRLVAGDS +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA +
Sbjct: 194 FVTSKRLVAGDSFVFLRGENGELRVGVRRVARQQSSMPSSVISSQSMHLGVLATASHAIS 253

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F V++ PR   S+F+I L KY++AV + + +VGMRF+M FE E+S  RR+ GTI G
Sbjct: 254 TLTLFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRFKMRFEGEDSPERRFSGTIVG 310

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 378
           + D  P  W++S WRS+KV WDE  +  R  RVS WEIEP        +  P  L +P  
Sbjct: 311 VEDFSP-HWNDSKWRSLKVQWDEPASISRPDRVSPWEIEPCV------ASVPANLSQPVQ 363

Query: 379 P 379
           P
Sbjct: 364 P 364



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 3/93 (3%)

Query: 688 TPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           T TR+  KV   G +VGR++D++    Y +L +EL Q+F I+G+     R  W++V+ D 
Sbjct: 479 TSTRSRTKVQLQGIAVGRAVDLTLIKGYGQLIDELEQLFDIKGQLHP--RDKWEIVYTDD 536

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           E D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 537 EGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 569


>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
 gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
          Length = 666

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 254/381 (66%), Gaps = 9/381 (2%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           C + ELW A AGPLV +P VG  V YFPQGH EQ+ A+TN+E++  IP    LP +++C+
Sbjct: 15  CSDEELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQRIPVL-KLPTKILCR 73

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + N+ + A+ ETDEVYAQ+TL P S + +     P    +P +   + FCK LTASDTST
Sbjct: 74  IVNIHLLAEQETDEVYAQITLVPESNQNEPTIPDPPTEELP-RPKIHSFCKILTASDTST 132

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV R+ A +  P LD S   P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 133 HGGFSVLRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 192

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FV++KRLVAGD+ +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA A
Sbjct: 193 FVTSKRLVAGDTFVFL-GENGELRVGVRRLARQSSSMPSSVISSQSMHLGVLATASHAVA 251

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES--SVRRYMGTI 316
           T + F V++ PR   S+F++ + KY+ AV   + +VGMRFRM FE+++S  S +R+ GTI
Sbjct: 252 TQTLFVVYYKPRT--SQFIVSVNKYLSAV-SNKFAVGMRFRMRFESDDSAESDKRFSGTI 308

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
            G+ D+ P  W+NS WRS+KV WDE +A  R  RVS WEIEP  +     ++ P   K  
Sbjct: 309 VGVEDISP-HWANSKWRSLKVQWDEPSAITRPDRVSPWEIEPFVSSASTATVQPTAAKTK 367

Query: 377 WHPSTSSFNDNRDETASGLNW 397
               TS   D    +A+ + W
Sbjct: 368 RPRPTSEIPDVDTTSAASIFW 388



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++  + Y++L  EL ++F I+G+ +   R+ W++VF D E 
Sbjct: 553 SRSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELFDIKGQLQH--RNTWEIVFTDDEG 610

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 611 DMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 641


>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
          Length = 335

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 172/318 (54%), Positives = 229/318 (72%), Gaps = 3/318 (0%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            L  ELWHACAGPLV+LP    RV YFPQGH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 21  ALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 79

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ +TDEVYAQ+TL P S + +  +  P  L  P++   + FCKTLTASDTST
Sbjct: 80  VVNVVLRAESDTDEVYAQITLLPESNQNEVTSPDP-PLPEPTRCNVHSFCKTLTASDTST 138

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A+   P LD S QPP QEL+A DLH  +W FRHIFRGQP+RHLLTTGWSV
Sbjct: 139 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSV 198

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+K+LVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 199 FVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 258

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           T + F+VF+ PR S S F++ L KY++A  H ++SVGMRF+M FE EE   R + GTI G
Sbjct: 259 TGTLFSVFYKPRTSRSTFLVSLNKYLEAQNH-KLSVGMRFKMRFEGEEVPERSFSGTIVG 317

Query: 319 ISDLDPVRWSNSHWRSVK 336
           + D     W+NS WRS+K
Sbjct: 318 LGDNASPGWANSEWRSLK 335


>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
           leschenaultii]
          Length = 550

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 204/468 (43%), Positives = 282/468 (60%), Gaps = 50/468 (10%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAAT-TNKEVDSHIPNYPNLPPQ 74
           D + +N ELWHACAGP+VSLP  G+ VVYFPQGH EQ+         D+       LPP 
Sbjct: 17  DREAVNIELWHACAGPVVSLPKKGSVVVYFPQGHLEQIGCHFVGLSADA-------LPPH 69

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTF--------------VPIELGIPS 120
           +  ++ +VT+ ADV TDEVYAQ++L PLS EE++                    +LG P+
Sbjct: 70  VFSRVVHVTLMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLG-PT 128

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           K P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P QEL+A+DLH  EW+FR
Sbjct: 129 KIP-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFR 187

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA++  +    ++ 
Sbjct: 188 HIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSTNFPAIQ 247

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           +S+  +I      A A +  S F + +NPR   SEF++P  K++K+ F+  +S+G RF+M
Sbjct: 248 NSNISNI------AQAISKKSLFHICYNPRDGQSEFIVPYWKFMKS-FNHPISIGTRFKM 300

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
            FE+E++S RRY G ITGISD+DP+RW  S WR + V WDE+    RQ RVS WEIE   
Sbjct: 301 NFESEDASERRYNGLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIELTG 360

Query: 361 TFP---MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGM 417
           T     M P+    RLK P  P+ +  N++ D       + +   G++   +L F+S   
Sbjct: 361 TVSQGMMAPN--SKRLK-PCTPTITGNNNSSDYLEPSGRFQKVLQGQE--MSLGFKS--- 412

Query: 418 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQY 465
            PW +  +  +       Q + A+   G   G P   Q  ++  P+ +
Sbjct: 413 -PWDRIPITST-------QPFCAVYTTGASLGFPKVLQGQEILPPYNH 452


>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
 gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 173/350 (49%), Positives = 239/350 (68%), Gaps = 15/350 (4%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV-----AATTNKEVDSHIPNYPNLPPQ 74
           L +ELWHACAGPLV +P  G +V YFPQGH EQV     AA  N+E    +P Y +LP +
Sbjct: 2   LYTELWHACAGPLVYVPRAGDKVFYFPQGHMEQVLLSTVAARMNEEGKMEMPIY-DLPYK 60

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ----KDTFVPIELGIPSKQPTNYFCKT 130
           ++C++ +V + A+  TDEV+A++TL P++ E++    KD      L +  K     F K 
Sbjct: 61  ILCKVVHVELKAEAGTDEVFARITLLPVAEEDELSSNKDG---KSLPLHRKTCARSFTKK 117

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT SDT THGGFSVP+R A++  P LD S QPP QEL+A+DLH  EW F+HI+RGQPKRH
Sbjct: 118 LTPSDTKTHGGFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRGQPKRH 177

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           L+T+GWS FVS+KRLVAGDS +F+  E  +L +G+RRA++    + +++LSS SM +G+L
Sbjct: 178 LITSGWSTFVSSKRLVAGDSFIFLRGESGELRVGVRRAMKLENNLSANILSSHSMQLGIL 237

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           ++A+HA  T S FT++F+P  SP+EF+IP  +Y+K+      S G RFRMLFE EE + +
Sbjct: 238 SSASHAITTGSMFTIYFHPWTSPAEFIIPYDQYMKSA-EIDYSAGTRFRMLFEGEECAEQ 296

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAG-ERQPRVSLWEIEPL 359
           R+ GT+ G  D+D +RW NS WR +KV WD ++     Q RVS W IEP+
Sbjct: 297 RFEGTVVGTEDVDHIRWPNSEWRILKVKWDAASEPFVHQERVSPWNIEPI 346


>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
          Length = 831

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 188/383 (49%), Positives = 239/383 (62%), Gaps = 61/383 (15%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 74
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ++            +YP    +LPP 
Sbjct: 47  CL--ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS------------DYPAVAYDLPPH 92

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK----------DTFVPIELGIPSKQPT 124
           + C++ +V +HA+V TDEVYAQ++L P +  +QK               IE  I S  P 
Sbjct: 93  VFCRVVDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTP- 151

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH  EW+FRHI+R
Sbjct: 152 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYR 211

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LGIRRA +     P   L S  
Sbjct: 212 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQ 271

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           +++  L A  +A +T S F + +NPRAS SEF+IPL K+ K++ H+  S GMRF+M  ET
Sbjct: 272 LNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHS-FSAGMRFKMRVET 330

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWR------------------------------S 334
           E+++ RRY G ITGISD+DPVRW  S WR                              S
Sbjct: 331 EDAAERRYTGLITGISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLS 390

Query: 335 VKVGWDESTAGERQPRVSLWEIE 357
           ++V WD+  A  R  RVS WEIE
Sbjct: 391 LQVRWDDIEA-NRHNRVSPWEIE 412


>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
           [Cucumis sativus]
          Length = 730

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 239/366 (65%), Gaps = 22/366 (6%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQLIC 77
           CL  ELWHACAGPL SLP  G+ VVY PQGH EQ+            P  P +LPP ++C
Sbjct: 44  CL--ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILC 92

Query: 78  QLHNVTMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELGIPSKQPTNYFCK 129
           ++ +V +HA+  +DEVYAQ++L P        +  E   D+              + FCK
Sbjct: 93  RVIDVQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCK 152

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DL  ++WKFRHI+RGQP+R
Sbjct: 153 TLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRR 212

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS FV+ KRLV+GD+VLF+     +L LGIRRA +  +    S + S  ++   
Sbjct: 213 HLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSS 272

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           +    +A ++ S F+V +NPRA+ S+FV+P  K++K++ H+  SVG+RFR+ FET++ + 
Sbjct: 273 IMDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHS-FSVGLRFRLSFETDDGAD 331

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RR+ G ITG+SD+DP+RW  S WRS+ V WD+     R  RVS WEIEP  +  +  +L 
Sbjct: 332 RRHTGHITGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTNLV 390

Query: 370 PLRLKR 375
           P  LKR
Sbjct: 391 PPGLKR 396


>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 736

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 181/375 (48%), Positives = 240/375 (64%), Gaps = 39/375 (10%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 74
           CL  ELWHACAGPL+SLP  G+ VVY PQGH E            H+ ++P    ++PP 
Sbjct: 51  CL--ELWHACAGPLISLPKKGSVVVYLPQGHFE------------HVQDFPVTAYDIPPH 96

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPS 120
           + C++ +V +HA+  +DEVY Q+ L P S +              E++DT   ++   P 
Sbjct: 97  VFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEQSLREGEIVADGEEEDTEAIVKSTTP- 155

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
               + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EW+FR
Sbjct: 156 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFR 211

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA +  +    +V 
Sbjct: 212 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVP 271

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           S   ++   L    +A +T   F+V +NPR S SEF+IP+ K++K++     SVGMRFRM
Sbjct: 272 SGQQLNPATLKGVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSL-DCSYSVGMRFRM 330

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
            FETE+++ RR  G I GISD+DPVRW  S WR + V WD+  A  R  RVS WEIEP  
Sbjct: 331 RFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEAARRN-RVSPWEIEPSG 389

Query: 361 TFPMYPSLFPLRLKR 375
           +     +L    LKR
Sbjct: 390 SASNSSNLMSAGLKR 404


>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
          Length = 731

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 239/366 (65%), Gaps = 22/366 (6%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQLIC 77
           CL  ELWHACAGPL SLP  G+ VVY PQGH EQ+            P  P +LPP ++C
Sbjct: 44  CL--ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILC 92

Query: 78  QLHNVTMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELGIPSKQPTNYFCK 129
           ++ +V +HA+  +DEVYAQ++L P        +  E   D+              + FCK
Sbjct: 93  RVIDVQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCK 152

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DL  ++WKFRHI+RGQP+R
Sbjct: 153 TLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRR 212

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS FV+ KRLV+GD+VLF+     +L LGIRRA +  +    S + S  ++   
Sbjct: 213 HLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSS 272

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           +    +A ++ S F+V +NPRA+ S+FV+P  K++K++ H+  SVG+RFR+ FET++ + 
Sbjct: 273 IMDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHS-FSVGLRFRLSFETDDGAD 331

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           RR+ G ITG+SD+DP+RW  S WRS+ V WD+     R  RVS WEIEP  +  +  +L 
Sbjct: 332 RRHTGHITGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTNLV 390

Query: 370 PLRLKR 375
           P  LKR
Sbjct: 391 PPGLKR 396


>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
          Length = 856

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 180/364 (49%), Positives = 244/364 (67%), Gaps = 14/364 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  DS +  Y +LP +L+C++
Sbjct: 16  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRV 74

Query: 80  HNVTMHADVETDEVYAQMTLQP------LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 133
            NV + A+ +TDEVYAQ+ L P      ++ E+   T  P++   P + P+      LT 
Sbjct: 75  LNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPGEGPSARRSPRLTP 134

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           + T+     +    +A    P  D +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL 
Sbjct: 135 ARTAASLYSAATLMSAS--LPWYDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQ 192

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A
Sbjct: 193 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 252

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
            HA  T S FTV++ PR SPSEF+IP  +Y+++V     SVGMRFRM FE EE+  +R+ 
Sbjct: 253 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSVGMRFRMRFEGEEAPEQRFT 311

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-R 372
           GTI G  +LDPV W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R
Sbjct: 312 GTIIGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSR 368

Query: 373 LKRP 376
           +KRP
Sbjct: 369 VKRP 372



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 82/134 (61%), Gaps = 4/134 (2%)

Query: 672 QDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGK 730
           Q + +   +V    Q+  TR+  KV+K G ++GRS+D+S+FS+Y+EL+ EL +MF  +G+
Sbjct: 670 QQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGE 729

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 790
                ++ WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +        
Sbjct: 730 LVSSNKN-WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAPRKDD 788

Query: 791 SGQRANSRGNCGRD 804
           S +  N +G+  RD
Sbjct: 789 SSE--NEKGSVKRD 800


>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 714

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 181/371 (48%), Positives = 237/371 (63%), Gaps = 29/371 (7%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP++SLP  G+ VVYFPQGH EQ         D  +P   N+P  + C+
Sbjct: 31  CL--ELWHACAGPMISLPKKGSVVVYFPQGHLEQHLH------DFPLPASANIPSHVFCR 82

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPSKQPT 124
           + +V +HA+  +DEVY Q+ L P S +              E++D     E  + S  P 
Sbjct: 83  VLDVKLHAEEGSDEVYCQVVLVPESEQVQQKLREGEFDADGEEEDA----EAVMKSTTP- 137

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+R
Sbjct: 138 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYR 197

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LGIRRA +  +    S LS   
Sbjct: 198 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQ 257

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
                L    +A +    F++ +NPR S SEF+IP+ ++VK++ ++  S GMRFRM FET
Sbjct: 258 GSPTSLMDVVNALSARCAFSIHYNPRVSSSEFIIPIHRFVKSLDYS-YSAGMRFRMRFET 316

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
           E+++ RR+ G I GI+D+DPVRW  S WR + V WD+  A  R  RVS WEIEP  +   
Sbjct: 317 EDAAERRFTGLIVGIADVDPVRWPGSRWRCLMVRWDDLEA-TRHNRVSPWEIEPSGSAST 375

Query: 365 YPSLFPLRLKR 375
             +L    LKR
Sbjct: 376 ANNLMSAGLKR 386


>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
          Length = 605

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/307 (56%), Positives = 219/307 (71%), Gaps = 6/307 (1%)

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-LSPEE--QKDTFVPIELG--IPSKQPTNYFC 128
           Q+ C++ +V +HAD E D+VYAQ+TL P L   E   K+     E G  I  K   + FC
Sbjct: 1   QIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFC 60

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+RGQP+
Sbjct: 61  KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPR 120

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGWSVFV+ K LV+GD+VLF+  E  +L LGIRRA RPP+ +P SVLSS  +H+ 
Sbjct: 121 RHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLS 180

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           +L+ AA+A +T S F VF++PRASPSEFVIP  KYVK++    +S+GMRF+M  E E+S+
Sbjct: 181 ILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRP-ISIGMRFKMRLEMEDSA 239

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            +R  G ITG  D+DP+RW NS WR + V WD+S+   RQ RVS WEIEP  + P     
Sbjct: 240 EKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALSCP 299

Query: 369 FPLRLKR 375
              R+KR
Sbjct: 300 VAPRIKR 306


>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
 gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 178/354 (50%), Positives = 236/354 (66%), Gaps = 31/354 (8%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 74
           CL  ELWHACAGPL+SLP  G+ VVY PQGH EQ            +P+ P    +LPP 
Sbjct: 47  CL--ELWHACAGPLISLPKRGSIVVYVPQGHLEQ------------LPDLPLGIYDLPPH 92

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE-EQK---------DTFVPIELGIPSKQPT 124
           + C++ +V +HA+  +D+VYAQ++L P S E EQK              +E  + +  P 
Sbjct: 93  VFCRVVDVKLHAEAASDDVYAQVSLVPESEEIEQKLREGVFEGDGEEEDVEATVKTTTP- 151

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH  EWKFRHI+R
Sbjct: 152 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYR 211

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LG+RRA +         L +  
Sbjct: 212 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPALWNQQ 271

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           ++   LA  A+A +  S F +++NPRAS SEF+IP  K++K++  +  S GMR +M FET
Sbjct: 272 LNQSSLADVANAISMRSAFRIYYNPRASSSEFIIPFNKFLKSLDQS-FSAGMRVKMRFET 330

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           E+++ RRY G ITGIS+LDP RW  S W+ + V WD++ A  R  RVS WE+EP
Sbjct: 331 EDAAERRYTGLITGISELDPTRWPGSKWKCLLVRWDDTEAN-RHSRVSPWEVEP 383


>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 189/385 (49%), Positives = 251/385 (65%), Gaps = 12/385 (3%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPP 73
           G  + L  ELW  C+GPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LPP
Sbjct: 2   GGGEYLYDELWKLCSGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LPP 60

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTF---VPIELGIPSKQPTNYFCKT 130
           +++C + NV++ A+ +TDEVYAQ+TL P+  E    T     P EL  P     + F K 
Sbjct: 61  KILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDGPTSPDPSPPELQRPK---VHSFSKV 117

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RH
Sbjct: 118 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 177

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FV++KRLVAGD+ +F+  EK +L +G+RRA R  + MPSSV+SS SMH+G+L
Sbjct: 178 LLTTGWSTFVTSKRLVAGDTFVFLRGEKGELRVGVRRANRQQSSMPSSVISSHSMHLGVL 237

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A A HA  T + F V++ PR   S+F+I L KY++A+   + SVGMRF+M FE E+S  R
Sbjct: 238 ATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPER 294

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 370
           RY GT+ G++D  P  W +S WR ++V WDE  +  R  +VS WEIEP  T    P    
Sbjct: 295 RYSGTVIGVNDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVTSENVPKSVM 353

Query: 371 LRLKRPWHPSTSSFNDNRDETASGL 395
           L+ KRP   S  S  D    TAS L
Sbjct: 354 LKNKRPRQVSEVSALDVGGITASNL 378



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 3/98 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+ +   R+ W++
Sbjct: 514 QSKQSSSTRSRTKVQMQGVPVGRAVDLTALKGYNELIDDIEKLFDIKGELQS--RNQWEI 571

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 572 VFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 609


>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
 gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
           truncatula]
 gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
          Length = 682

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 181/375 (48%), Positives = 236/375 (62%), Gaps = 38/375 (10%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 74
           CL  ELWHACAGPL+SLP  G+ VVY PQGH EQ              ++P    N+PP 
Sbjct: 51  CL--ELWHACAGPLISLPKKGSIVVYVPQGHFEQAH------------DFPVSACNIPPH 96

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPS 120
           + C++ +V +HA+  +DEVY Q+ L P + +              E++DT    E  + S
Sbjct: 97  VFCRVLDVKLHAEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDT----EAIVKS 152

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
             P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH  EW+FR
Sbjct: 153 TTP-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFR 211

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LGIRRA++  +      L
Sbjct: 212 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGL 271

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           S   +  G L    +A +  S F+V +NPR S SEF+IP+ K++K++     S GMRFRM
Sbjct: 272 SGMQLDPGSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSL-DCSYSAGMRFRM 330

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
            FETE+++ RR+ G I GISD DPVRW  S W+ + V WD+  A     RVS WEIEP  
Sbjct: 331 RFETEDAAERRFTGLIAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSG 390

Query: 361 TFPMYPSLFPLRLKR 375
           +     +L    LKR
Sbjct: 391 SASNSSNLMAASLKR 405


>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
          Length = 608

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 174/353 (49%), Positives = 233/353 (66%), Gaps = 20/353 (5%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G   CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP 
Sbjct: 48  GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPH 97

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE---EQKDTFVPIELG------IPSKQPTN 125
           + C++ +V +HA+  TDEVYAQ++L P S +   + ++  + ++ G      +      +
Sbjct: 98  VFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH 157

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRG 217

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + +M
Sbjct: 218 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNM 277

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           +    +  AHA +T+S F++ +NP+AS S F+IP  K++K V +    +GMRF+   E+E
Sbjct: 278 NHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESE 336

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           ++S RR  G I+GISDLDP+RW  S WR + V WD+  A   Q RVS WEIEP
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389


>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
 gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
 gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
 gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
           thaliana]
 gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
           thaliana]
 gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
 gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
          Length = 608

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 174/353 (49%), Positives = 233/353 (66%), Gaps = 20/353 (5%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G   CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP 
Sbjct: 48  GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPH 97

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE---EQKDTFVPIELG------IPSKQPTN 125
           + C++ +V +HA+  TDEVYAQ++L P S +   + ++  + ++ G      +      +
Sbjct: 98  VFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH 157

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRG 217

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + +M
Sbjct: 218 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNM 277

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           +    +  AHA +T+S F++ +NP+AS S F+IP  K++K V +    +GMRF+   E+E
Sbjct: 278 NHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESE 336

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           ++S RR  G I+GISDLDP+RW  S WR + V WD+  A   Q RVS WEIEP
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389


>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
 gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
          Length = 644

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 178/348 (51%), Positives = 239/348 (68%), Gaps = 13/348 (3%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  ELW  CAGP+V +P  G RV YFPQGH EQ+ A+ N+E+D  +P++ NL  +
Sbjct: 5   GKKDALYHELWQLCAGPVVDVPREGERVYYFPQGHMEQLVASINQEMDQRVPSF-NLKSK 63

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK----DTFVPIELGIPSKQPTNYFCKT 130
           ++C++ N    A+ + DEVY Q+TL P +P   +    D  +P ++    K   + FCK 
Sbjct: 64  VLCRVINSHFLAEEDNDEVYVQITLMPEAPHVPEPTTPDPLIPQDV----KPRFHSFCKV 119

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV R+ A +  P LD + Q P QELIA+DLHDVEW+F+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRRH 179

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FVS+K+LVAGDS +F+     QL +G++R +R  + MPSSV+SS SMH+G+L
Sbjct: 180 LLTTGWSTFVSSKKLVAGDSFVFLRGNNGQLRVGVKRLVRQQSSMPSSVMSSQSMHLGVL 239

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A A+HA  T + F V++ PR   ++F++ + KY++A+ H   +VGMRF+M FE E +  R
Sbjct: 240 ATASHAVTTQTMFVVYYKPRT--TQFIVGVNKYLEALKH-EYAVGMRFKMQFEAEGNPDR 296

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           R+MGTI GI DL   +W NS WRS+KV WDE  A  R  RVS WEI+P
Sbjct: 297 RFMGTIVGIDDLSS-QWKNSAWRSLKVRWDEPAAIARPDRVSPWEIKP 343



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 25/181 (13%)

Query: 616 NCNTDSQNSVVFGVHIDSSGL--------LLPTTVSSFTTSVDPGVSSMPLGDSG----- 662
            C+T  +   +FG+ + SS +        L P  +S       P  +++P GDS      
Sbjct: 465 KCDT-KKTCRLFGIDLKSSSISTTEARLQLQPAGISCVFAERAPP-NTVPAGDSDQKSEL 522

Query: 663 ---FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELR 718
              F + M G ++    L     Q  Q   TR+  KV   G +VGR++D++    Y+EL 
Sbjct: 523 SVDFKDQMQGHLR----LPLKEVQSKQSCSTRSRTKVQMQGVAVGRAVDLTILKGYDELT 578

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
           +EL +MF I+G+ +   R  W ++F D E D +L+GD PW+ F + V  I I S +D++K
Sbjct: 579 KELEEMFEIQGELQS--RQKWGILFTDDEGDTMLMGDYPWQDFCNVVRKIFICSSQDMKK 636

Query: 779 M 779
           +
Sbjct: 637 L 637


>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
          Length = 608

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 174/353 (49%), Positives = 233/353 (66%), Gaps = 20/353 (5%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G   CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP 
Sbjct: 48  GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPH 97

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE---EQKDTFVPIELG------IPSKQPTN 125
           + C++ +V +HA+  TDEVYAQ++L P S +   + ++  + ++ G      +      +
Sbjct: 98  VFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH 157

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRG 217

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + +M
Sbjct: 218 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNM 277

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
           +    +  AHA +T+S F++ +NP+AS S F+IP  K++K V +    +GMRF+   E+E
Sbjct: 278 NHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESE 336

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           ++S RR  G I+GISDLDP+RW  S WR + V WD+  A   Q RVS WEIEP
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389


>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 709

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 176/371 (47%), Positives = 236/371 (63%), Gaps = 29/371 (7%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ         D  +P   N+P  + C+
Sbjct: 26  CL--ELWHACAGPLISLPKKGSVVVYFPQGHLEQHLH------DFPLPASANIPSHVFCR 77

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPSKQPT 124
           + +V +HA+  +DEV+ Q+ L P + +              E++D    ++   P     
Sbjct: 78  VLDVKLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVMKSTTP----- 132

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+R
Sbjct: 133 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYR 192

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LGIRRA +  +    S LS   
Sbjct: 193 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQ 252

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           +    L    +A +    F++ +NPR S SEF+IP+ +++K++ ++  S GMRFRM FET
Sbjct: 253 LSPTSLMDVVNALSARCAFSIHYNPRVSTSEFIIPIHRFLKSLDYS-YSAGMRFRMRFET 311

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
           E+++ RR+ G I GI+D+DPVRW  S WR + V WD+     R  RVS WEIEP  +   
Sbjct: 312 EDAAERRFTGLIVGIADVDPVRWPGSKWRCLMVRWDDLEV-TRHNRVSPWEIEPSGSAST 370

Query: 365 YPSLFPLRLKR 375
             +L    LKR
Sbjct: 371 ANNLMSAGLKR 381


>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
          Length = 605

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 173/350 (49%), Positives = 233/350 (66%), Gaps = 21/350 (6%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP + C+
Sbjct: 50  CL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPHVFCR 99

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELG------IPSKQPTNYFCK 129
           + +V +HA+  TDEVYAQ++L P S + ++   +  + ++ G      +      + FCK
Sbjct: 100 ILDVKLHAETATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVVKRTNTPHMFCK 159

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAE  FP LD++   P+QEL+ARDLH +EW+FRHI+RGQP+R
Sbjct: 160 TLTASDTSTHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRR 219

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + +M+   
Sbjct: 220 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFSSQYNQNMNHNN 279

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
            A   HA +TNS F +++NP+AS S F+IP  K++K V +    +GMRF+   E+E++S 
Sbjct: 280 FAEVVHAISTNSAFNIYYNPKASWSNFIIPAPKFLKTVDYP-FCIGMRFKARVESEDASE 338

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA-GERQPRVSLWEIEP 358
           RR  G ITGI+DLDP+RW  S WR + V WD++ A G  Q R+S WEIEP
Sbjct: 339 RRSPGIITGINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEP 388


>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
          Length = 688

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 178/362 (49%), Positives = 241/362 (66%), Gaps = 13/362 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELW ACAGPLV +P V  RV YFPQ       A+TN E++  IP + NL  +++C++
Sbjct: 27  LYMELWRACAGPLVDIPRVDERVFYFPQ------QASTNLELNKRIPLF-NLDSKILCRV 79

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            ++   AD E+DEVYAQ+TL P S + +  + +      P +   + FCK LTASDTSTH
Sbjct: 80  IHIEPLADHESDEVYAQITLMPESNQNEPKS-MDPCPPEPPRPVVHSFCKVLTASDTSTH 138

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV R+ A +  P LD +L  P Q+L+A+DLH  EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 198

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           V++KRL AGDS +F+  +  +L +G+RR  R  + MP SV+SS SMH+G+LA A+HA  T
Sbjct: 199 VTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTT 258

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F V++ PR    +F+I L KY++AV + + SVGMRF M FE E+S  RR+ GTI G 
Sbjct: 259 QTRFVVYYKPRT--CQFIISLNKYLEAV-NNKFSVGMRFNMSFEGEDSPERRFSGTIIGA 315

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRPWH 378
            D+ P  W NS WRS++V WDE T+  R  RVS W+IEPLT+  +     P+ + KRP  
Sbjct: 316 VDISP-HWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPISKNKRPRQ 374

Query: 379 PS 380
           P+
Sbjct: 375 PT 376



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV   G +VGR++D++    Y++L +EL +MF + G+     R  W++V+ D E 
Sbjct: 576 TRSRTKVLMHGMAVGRAVDLTILEGYDQLIDELEKMFDVRGQL--CARDKWEIVYTDDEG 633

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPWE F + V  I I S E V+ M
Sbjct: 634 DMMLVGDDPWEEFRNMVRRIFICSKEQVKNM 664


>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 664

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 181/370 (48%), Positives = 252/370 (68%), Gaps = 10/370 (2%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           +G  G+   L  +LW ACAGP V +P  G RV YFPQGH EQ+  +TN+E++  IP +  
Sbjct: 5   RGGGGEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLF-K 63

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           LP +++C++ NV + A+ ETDEVYAQ+TL P S + +  +  P    +PS +  + FCK 
Sbjct: 64  LPSKILCRVVNVHLLAEQETDEVYAQITLVPESNQAEPMSPDPCPAELPSPR-VHSFCKV 122

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV R+ A +  P+LD S   P QEL+A+DL   EW+F+HIFRGQP+RH
Sbjct: 123 LTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRRH 182

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FV++KRLVAGD+ +F+     +L +G+RR     + MPSSV+SS SMH+G+L
Sbjct: 183 LLTTGWSNFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPVQSSMPSSVISSQSMHLGVL 242

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES--S 308
           A A+HA AT + F V++ PRA  S+F++ + KY++A+ + + +VGMRF+  FE +ES  +
Sbjct: 243 ATASHAVATQTLFVVYYKPRA--SQFIVSVNKYLEAI-NQKCNVGMRFKTRFEGDESPEN 299

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPS 367
            +R+ GTI G+ D+ P  W NS+WRS+KV WDE  +  R  RV  WEIEP L + P   S
Sbjct: 300 YKRFSGTIVGVEDISP-HWVNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTSS 358

Query: 368 -LFPLRLKRP 376
               ++ KRP
Sbjct: 359 QTAAIKNKRP 368



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++    Y++L +EL +MF I+G+ +  LR+ W++VF D E 
Sbjct: 553 SRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQ--LRNKWEIVFTDDEG 610

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F   V  I I S +DV K+
Sbjct: 611 DMMLVGDDPWLEFCKMVRRIFIYSSQDVHKL 641


>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
 gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
          Length = 537

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 178/339 (52%), Positives = 238/339 (70%), Gaps = 6/339 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E++  +P + NLP +++C++
Sbjct: 3   LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLF-NLPSKILCRV 61

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            +  + A+ +TDEVYAQ+TL P S ++ + T        P +   + FCK LTASDTSTH
Sbjct: 62  IHTQLLAEQDTDEVYAQITLIPES-DQIEPTSPDSSSSEPPRPTVHSFCKVLTASDTSTH 120

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV R+ A +  P LD +   P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 121 GGFSVLRKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 180

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           V++KRLVAGDS +F+  E  +L +G+RR     + MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 181 VTSKRLVAGDSFVFLRGENGELRVGVRRVACQQSSMPSSVISSQSMHLGVLATASHAVST 240

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            + F V++ PR   S+F+I L KY++AV +  V VGMRF+M FE E+S  RR+ GTI G+
Sbjct: 241 LTLFVVYYKPRT--SQFIISLNKYLEAVSNKFV-VGMRFKMRFEGEDSPDRRFSGTIVGV 297

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
            D  P  W++S WRS+KV WDE     R  RVS WEIEP
Sbjct: 298 EDFSP-HWNDSKWRSLKVQWDEPAPIPRPDRVSPWEIEP 335



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 3/93 (3%)

Query: 688 TPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           T TR+  KV   G +VGR++D++    Y++L +EL Q+F I+G+     R  W++V+ D 
Sbjct: 447 TSTRSRTKVQMQGIAVGRAVDLTMLKGYSQLIDELEQLFDIKGQLHP--RDKWEIVYTDD 504

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           E D++L+GDDPW  F + V  I I S +DV++M
Sbjct: 505 EGDMMLVGDDPWPEFCNMVRRIYICSSQDVKRM 537


>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 728

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 177/375 (47%), Positives = 236/375 (62%), Gaps = 39/375 (10%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 74
           CL  ELWHACAGPL+SLP  G+ VVY PQGH E            H+ ++P    ++PP 
Sbjct: 42  CL--ELWHACAGPLISLPKRGSVVVYLPQGHFE------------HVQDFPVNAFDIPPH 87

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPS 120
           + C++ +V +HA+  +DEVY Q+ L P S +              E++DT   ++   P 
Sbjct: 88  VFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATVKSTTP- 146

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
               + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EW+FR
Sbjct: 147 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFR 202

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LGIRRA +       +V 
Sbjct: 203 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVP 262

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           S   ++   L    +A +T   F+V +NPR     F+IP+ K+++++     SVGMRFRM
Sbjct: 263 SGQQLNPATLMDVVNALSTRCAFSVCYNPRYFSXXFIIPVHKFLESL-DCSYSVGMRFRM 321

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
            FETE+++ RR+ G I GISD+DPVRW  S WR + V WD+  A  R  RVS WEIEP  
Sbjct: 322 RFETEDAADRRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDIEAA-RHNRVSPWEIEPSG 380

Query: 361 TFPMYPSLFPLRLKR 375
           +     +L    LKR
Sbjct: 381 SASNSSNLMAAGLKR 395


>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
 gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
          Length = 714

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 177/358 (49%), Positives = 234/358 (65%), Gaps = 39/358 (10%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 74
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ            +P+ P    +LP  
Sbjct: 47  CL--ELWHACAGPLISLPKRGSVVVYFPQGHLEQ------------LPDLPLAVYDLPSH 92

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPE-EQK-------------DTFVPIELGIPS 120
           + C++ +V +HA+  +DEVYAQ++L P S E EQK             D    +++  P 
Sbjct: 93  VFCRVVDVKLHAEAASDEVYAQVSLVPESEEIEQKLREGIFEGDGEEEDGEATVKMTTP- 151

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
               + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH  EWKFR
Sbjct: 152 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFR 207

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LG+RRA +          
Sbjct: 208 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPAQ 267

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
            +  ++       A+A +T S F +++NPRAS SEF+IP  K++K++  +  S GMRF+M
Sbjct: 268 WNHQLNQISPGDVANAISTRSFFHIYYNPRASSSEFIIPFNKFLKSLDQS-FSSGMRFKM 326

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
            FETE+++ RRY G ITG+S+LDP RW  S W+ + V WD+  A  R  RVS WE+EP
Sbjct: 327 RFETEDAAERRYTGIITGVSELDPARWPGSKWKCLLVRWDDREA-NRLSRVSPWEVEP 383


>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
          Length = 631

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 179/254 (70%), Positives = 197/254 (77%), Gaps = 8/254 (3%)

Query: 213 FIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRAS 272
            + N+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA+TNS FT+F+NPRAS
Sbjct: 5   LVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRAS 64

Query: 273 PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHW 332
           PSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGTITGISDLD VRW NSHW
Sbjct: 65  PSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHW 124

Query: 333 RSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDET- 391
           RSVKVGWDESTAG+RQPRVSLWEIEPLTTFP Y S FPLRLKRPW     S +  +D+  
Sbjct: 125 RSVKVGWDESTAGDRQPRVSLWEIEPLTTFPTYTSPFPLRLKRPWPTGLPSLHGGKDDDL 184

Query: 392 ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDP 451
           A+ L WLR  T   G  +LNF  LGM  WMQ R++ S LG   +  YQAM     Q  DP
Sbjct: 185 ANSLMWLRDTTNP-GFQSLNFGGLGMNSWMQPRLDTSLLGLQPD-MYQAMATGAFQ--DP 240

Query: 452 VRQQ---FMQLQQP 462
            +Q     +Q QQP
Sbjct: 241 TKQASPTMLQFQQP 254



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/159 (51%), Positives = 106/159 (66%), Gaps = 17/159 (10%)

Query: 615 ENCNTDSQNSVVFGVHIDSSGLLLP-----------TTVSSFTTS--VDPGVSSMPLGDS 661
           ++ N D QN ++FGV IDS  LL+            +T   ++TS  + P  +  PL D 
Sbjct: 476 QDANPDPQNHLLFGVSIDSQSLLMEGGIHGLQNGNDSTAIPYSTSNFLSPSQNDFPL-DH 534

Query: 662 GFHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRFSSYNELREE 720
             ++S  GC+ DS  +       DQ+  P  TFVKVYKSG+ GRSLDI+RFSSY+ELR E
Sbjct: 535 TLNSS--GCLDDSGYVPPCSDNSDQVNRPPATFVKVYKSGTYGRSLDITRFSSYHELRRE 592

Query: 721 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 759
           LG++FG+EG+ EDPLRSGWQLVFVDRE DVLL+GDDPW+
Sbjct: 593 LGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQ 631


>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
          Length = 686

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 23/392 (5%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           QG   D + L  ELW ACAGPLV LP    RV YF QGH EQ+   T+  + +       
Sbjct: 3   QGAGRDPEELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQ 62

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           +P +++C++ NV + A+ ETDE+YAQ+TLQP   +          L   S+   + FCK 
Sbjct: 63  VPNKILCKVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKI 122

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT SDTSTHGGFSV RR A +  P+LD S+  P QELI +DLH  EW+F+HI+RGQP+RH
Sbjct: 123 LTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRH 182

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FV++K+L+AGD+ +++ +E  Q  +G+RR ++  + MP+SV+SS SMH+G+L
Sbjct: 183 LLTTGWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVL 242

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A+A+HA  T+S F V++ PR S S++++ L KY+++       VGMRF+M FE ++  ++
Sbjct: 243 ASASHAIRTHSIFLVYYRPRLSQSQYIVRLNKYLESS-KIGFDVGMRFKMSFEGDDVPIK 301

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL------TTFPM 364
           ++ GT+    DL P +W  S W+++KV WDE+T      RVS WEIEP        T P+
Sbjct: 302 KFSGTVVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPV 360

Query: 365 YPSLFPLRLKRPWHPSTSSFNDNRDETASGLN 396
            PS   ++ KRP             ETA GL+
Sbjct: 361 QPS---MKNKRP------------RETAEGLD 377



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 683 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q    R+ +KV   G+ V R++D+     Y +L  E+G+MF I+       +  W++
Sbjct: 576 QSHQSCSGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKV 634

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQ 793
            F++ EN+ + +G  PW+ F   V  I I S      +G++G     P  GQ
Sbjct: 635 TFINDENETMEVGAVPWQEFCQMVRKIVIHS------IGDRGHMEACPCLGQ 680


>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
 gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
          Length = 688

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 181/423 (42%), Positives = 262/423 (61%), Gaps = 21/423 (4%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G +  L +ELW ACAGPLV LP    RV YF QGH EQ+   T+  + +       +P 
Sbjct: 3   QGRDPELFAELWRACAGPLVELPQTDERVFYFLQGHLEQLQEPTDPALLADQIKMFQVPN 62

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLT 132
           +++C++ NV + A+ ETDE+YAQ+TLQP  P++     +P      + +P  + FCK LT
Sbjct: 63  KILCKVVNVELKAETETDEMYAQITLQP-EPDQMDLPTLPDPPLPETSRPVVHSFCKILT 121

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
            SDTSTHGGFSV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLL
Sbjct: 122 PSDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLL 181

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS FV++K+L+AGD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+
Sbjct: 182 TTGWSTFVTSKKLIAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 241

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           A+HA  TNS F V++ PR S S++++ L KY+++      +VGMRF+M FE E+  V+++
Sbjct: 242 ASHAIKTNSIFLVYYRPRLSQSQYIVSLNKYLESS-KIGFNVGMRFKMSFEGEDVPVKKF 300

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL------TTFPMYP 366
            GT+    DL P  W  S W+++KV WDE+T      RVS WEIEP          P+ P
Sbjct: 301 SGTVVDKGDLSP-HWQGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASAPAINIPVQP 359

Query: 367 SLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTL-----NFQSLGMFPWM 421
           S   ++ KRP   +  S + +  E A    WL  G  EQ  T++     N  S+    W 
Sbjct: 360 S---MKNKRP-RETAESLDIHALEPAQEF-WL-SGRPEQHKTSISSNEPNCISVHQVAWT 413

Query: 422 QQR 424
            +R
Sbjct: 414 SER 416



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 626 VFGV----HIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNV 681
           +FGV    H  SSG+    TV    TS+    S     DSG  +++    +D + L++  
Sbjct: 519 LFGVNLVNHTRSSGIADKMTVGVGETSMRGAGS---FEDSGQLSALSRVTKDHTHLVNES 575

Query: 682 G---QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIE--GKFEDPL 735
               Q  Q    R  +KV   G +VG+++D+     Y +L  EL +MF I+  G  E+  
Sbjct: 576 PREIQSHQSCSGRNRIKVQMHGHAVGKAVDLGNLDGYVQLMGELEEMFEIKDLGSKEE-- 633

Query: 736 RSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 770
              W++ F + END + +G   W+ F   V  I I
Sbjct: 634 ---WKVTFTNDENDTMEVGAVLWQEFCQMVRKIVI 665


>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
 gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
          Length = 686

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 23/392 (5%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           QG   D + L  ELW ACAGPLV LP    RV YF QGH EQ+   T+  + +       
Sbjct: 3   QGAGRDPEELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQ 62

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           +P +++C++ NV + A+ ETDE+YAQ+TLQP   +          L   S+   + FCK 
Sbjct: 63  VPNKILCKVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKI 122

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT SDTSTHGGFSV RR A +  P+LD S+  P QELI +DLH  EW+F+HI+RGQP+RH
Sbjct: 123 LTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRH 182

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FV++K+L+AGD+ +++ +E  Q  +G+RR ++  + MP+SV+SS SMH+G+L
Sbjct: 183 LLTTGWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVL 242

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A+A+HA  T+S F V++ PR S S++++ L KY+++       VGMRF+M FE ++  ++
Sbjct: 243 ASASHAIRTHSIFLVYYRPRLSQSQYIVRLNKYLESS-KIGFDVGMRFKMSFEGDDVPIK 301

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL------TTFPM 364
           ++ GT+    DL P +W  S W+++KV WDE+T      RVS WEIEP        T P+
Sbjct: 302 KFSGTVVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPV 360

Query: 365 YPSLFPLRLKRPWHPSTSSFNDNRDETASGLN 396
            PS   ++ KRP             ETA GL+
Sbjct: 361 QPS---MKNKRP------------RETAEGLD 377



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 683 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q    R+ +KV   G+ V R++D+     Y +L  E+G+MF I+       +  W++
Sbjct: 576 QSHQSCSGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKV 634

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQ 793
            F++ EN+ + +G  PW+ F   V  I I S      +G++G     P  GQ
Sbjct: 635 TFINDENETMEVGAVPWQEFCQMVRKIVIHS------IGDRGHMEACPCLGQ 680


>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 771

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 166/313 (53%), Positives = 220/313 (70%), Gaps = 10/313 (3%)

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY--- 126
           NLP +++C++ NV + A+ +TDEVYAQ+TL P S  +Q++     E  +PS     +   
Sbjct: 5   NLPWKILCEVMNVELKAEPDTDEVYAQLTLLPES--KQQEDNGSTEEEVPSAPAAGHVRP 62

Query: 127 ----FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
               FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHI
Sbjct: 63  RVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHI 122

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           FRGQP+RHLL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS
Sbjct: 123 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISS 182

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
            SMH+G+LA A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M F
Sbjct: 183 HSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KQNYSIGMRFKMRF 241

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
           E EE+  +R+ GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + 
Sbjct: 242 EGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSP 301

Query: 363 PMYPSLFPLRLKR 375
           P    L   R KR
Sbjct: 302 PPVNPLPVPRTKR 314



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 674 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 732
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 626 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 685

Query: 733 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 686 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 744

Query: 793 QRANSRGNCGRDPVGSL 809
             +  RG+ GR+  G L
Sbjct: 745 ANSMERGSVGREMRGCL 761


>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 763

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 165/346 (47%), Positives = 237/346 (68%), Gaps = 7/346 (2%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G +  L +ELW ACAGPLV +P  G RV YF QGH EQ+   T+  + +       +P +
Sbjct: 65  GRDPELFAELWRACAGPLVEVPQRGERVFYFLQGHLEQLQEPTDSALLAEQIKMFQVPYK 124

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS--KQPTNYFCKTLT 132
           ++C++ NV + A+ ETDEVYAQ+TLQP +  +Q D  + ++  +P   +   + FCK LT
Sbjct: 125 ILCKVVNVELKAETETDEVYAQITLQPDA--DQSDLPLILDPTLPETPRPVVHTFCKILT 182

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
            SDTSTHGGFSV RR A +  P LD ++  P QE+I++DLH  EW+F+HI+RGQP+RHLL
Sbjct: 183 PSDTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQPRRHLL 242

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS FV++K+L+AGD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+
Sbjct: 243 TTGWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 302

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           A+HA  TNS F V++ PR S S++++ + KY  A   T  +VGMRFRM FE E+  V+++
Sbjct: 303 ASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLAS-KTGFTVGMRFRMNFEAEDVPVKKF 361

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIE 357
            GTI G  D  P +WS S W+S+KV WD+S A    P RVS WEI+
Sbjct: 362 FGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEID 406



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R  VKV   G +VGR++D++    Y  L  EL QMF I+      ++  +++ F D E D
Sbjct: 659 RNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIKD-----IKQNFKVAFNDNEGD 713

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF--SPSSGQRAN 796
            + +GDDPW  F   V  I I   ED + M       F  +P    +AN
Sbjct: 714 TMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDPHQTSVFAAAPDEDLKAN 762


>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
 gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
          Length = 185

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 153/185 (82%), Positives = 167/185 (90%)

Query: 1   MKLSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE 60
           M+ S++    Q  EG+ + LNSELWHACAGPLVSLP VG+RVVYF QGHSEQVAA+TNKE
Sbjct: 1   MRHSSASFNPQTQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKE 60

Query: 61  VDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS 120
           VD+ IPNYP+LPPQLICQLHNVTMHADVETDEVYAQ+TLQPLSP+EQKD ++P +LG PS
Sbjct: 61  VDARIPNYPSLPPQLICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPS 120

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFR
Sbjct: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 180

Query: 181 HIFRG 185
           HIFRG
Sbjct: 181 HIFRG 185


>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 664

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 178/369 (48%), Positives = 248/369 (67%), Gaps = 10/369 (2%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G  G+   L  +LW ACAGP V +P  G RV YFPQGH EQ+  +TN+E++  IP +  L
Sbjct: 7   GCGGEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLF-KL 65

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 131
             +++C++ NV + A+ ETDEVYAQ+TL P S + +  +  P    +P  +  + FCK L
Sbjct: 66  SSKILCRVVNVHLLAEQETDEVYAQITLVPESNQTEPTSPDPCPAELPRPR-VHSFCKVL 124

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV R+ A +  P+LD S   P QEL+A+DL   EW+F+HIFRGQP+RHL
Sbjct: 125 TASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGFEWRFKHIFRGQPRRHL 184

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS FV++KRLVAGD+ +F+     +L +G+RR     + MPSSV+SS SMH+G+LA
Sbjct: 185 LTTGWSTFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPLQSSMPSSVISSQSMHLGVLA 244

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES--SV 309
            A+HA AT + F V++ PR   S+F++ + KY++A+ + + +VGMRF+M FE +ES  + 
Sbjct: 245 TASHAVATQTLFVVYYKPRT--SQFIVSVNKYLEAI-NQKCNVGMRFKMRFEGDESPEND 301

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369
           +R+ GTI G+ D+ P  W NS+WRS+KV WDE  +  R  RVS WEIE +       S  
Sbjct: 302 KRFSGTILGVEDISP-HWVNSNWRSLKVQWDEPASFPRPDRVSSWEIEHILACVPTTSSQ 360

Query: 370 P--LRLKRP 376
           P  ++ KRP
Sbjct: 361 PAVIKNKRP 369



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++    Y++L +EL +MF I+G+ +   R+ W+ VF D E 
Sbjct: 553 SRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQH--RNKWETVFTDDEG 610

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW  F + V  I I S +DV K+
Sbjct: 611 DMMLVGDDPWPEFCNMVKRIFICSSQDVHKL 641


>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
 gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
 gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
 gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
 gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
 gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 699

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 168/370 (45%), Positives = 241/370 (65%), Gaps = 13/370 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV +P    RV YF QGH EQ+   T+  + +       +P +++C++
Sbjct: 15  LFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCKV 74

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASDTST 138
            NV + A+ ETDEV+AQ+TLQP  P+++    +P        +P  + FCK LT SDTST
Sbjct: 75  VNVELKAETETDEVFAQITLQP-DPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTST 133

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLLTTGWS 
Sbjct: 134 HGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 193

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FV++K+L++GD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+A+HA  
Sbjct: 194 FVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 253

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           TNS F V++ PR S S++++ + KY+ A      +VGMRF+M FE E+  V+++ GTI G
Sbjct: 254 TNSIFLVYYRPRLSQSQYIVSVNKYL-AASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVG 312

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE------PLTTFPMYPSLFPLR 372
             DL  ++WS S W+S+KV WDE T      RVS WEIE      P    P+  +    +
Sbjct: 313 EGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQSA---TK 368

Query: 373 LKRPWHPSTS 382
            KRP  PS +
Sbjct: 369 NKRPREPSET 378



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           RT +KV   G +VGR++D++    Y +L  EL +MF I+      L+  W++ F D E D
Sbjct: 595 RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKD-----LKQKWKVAFTDDEGD 649

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            + +GDDPW  F   V  I +   ED +K+
Sbjct: 650 TMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 679


>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 636

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 179/366 (48%), Positives = 240/366 (65%), Gaps = 22/366 (6%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 78
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LPP+++C 
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LPPKILCN 67

Query: 79  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           + NV++ A+ +TDEVYAQ+TL        +P+SP+       P EL  P     + F K 
Sbjct: 68  VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPS-----PPELQRPK---VHSFSKV 119

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FV++KRLVAGD+ +F+  E  +L +G+RRA    + MPSSV+SS SMH+G+L
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A A HA  T + F V++ PR   S+F+I L KY++A+   + SVGMRF+M FE E+S  R
Sbjct: 240 ATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPER 296

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 370
           RY GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP       P    
Sbjct: 297 RYSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVM 355

Query: 371 LRLKRP 376
           L+ KRP
Sbjct: 356 LKNKRP 361



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 621 SQNSVVFGVHIDSSGLLLPTTVSSFTTSVD---PGVSSMPLGDSGFHNSMYGCMQDSSEL 677
           + N  +FG+ + SS L +P   ++    ++   P + S     S          Q+ +E 
Sbjct: 448 TANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEG 507

Query: 678 LHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 736
                Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+     R
Sbjct: 508 SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--R 565

Query: 737 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           + W++VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 566 NQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 608


>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
 gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
 gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
 gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
 gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
 gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 638

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 179/366 (48%), Positives = 240/366 (65%), Gaps = 22/366 (6%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 78
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LPP+++C 
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LPPKILCN 67

Query: 79  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           + NV++ A+ +TDEVYAQ+TL        +P+SP+       P EL  P     + F K 
Sbjct: 68  VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPS-----PPELQRPK---VHSFSKV 119

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FV++KRLVAGD+ +F+  E  +L +G+RRA    + MPSSV+SS SMH+G+L
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           A A HA  T + F V++ PR   S+F+I L KY++A+   + SVGMRF+M FE E+S  R
Sbjct: 240 ATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPER 296

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 370
           RY GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP       P    
Sbjct: 297 RYSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVM 355

Query: 371 LRLKRP 376
           L+ KRP
Sbjct: 356 LKNKRP 361



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 621 SQNSVVFGVHIDSSGLLLPTTVSSFTTSVD---PGVSSMPLGDSGFHNSMYGCMQDSSEL 677
           + N  +FG+ + SS L +P   ++    ++   P + S     S          Q+ +E 
Sbjct: 450 TANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEG 509

Query: 678 LHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 736
                Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+     R
Sbjct: 510 SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--R 567

Query: 737 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           + W++VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 568 NQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 610


>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
          Length = 695

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 168/370 (45%), Positives = 241/370 (65%), Gaps = 13/370 (3%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW ACAGPLV +P    RV YF QGH EQ+   T+  + +       +P +++C++
Sbjct: 11  LFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCKV 70

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASDTST 138
            NV + A+ ETDEV+AQ+TLQP  P+++    +P        +P  + FCK LT SDTST
Sbjct: 71  VNVELKAETETDEVFAQITLQP-DPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTST 129

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLLTTGWS 
Sbjct: 130 HGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 189

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FV++K+L++GD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+A+HA  
Sbjct: 190 FVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 249

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
           TNS F V++ PR S S++++ + KY+ A      +VGMRF+M FE E+  V+++ GTI G
Sbjct: 250 TNSIFLVYYRPRLSQSQYIVSVNKYL-AASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVG 308

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE------PLTTFPMYPSLFPLR 372
             DL  ++WS S W+S+KV WDE T      RVS WEIE      P    P+  +    +
Sbjct: 309 EGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQSA---TK 364

Query: 373 LKRPWHPSTS 382
            KRP  PS +
Sbjct: 365 NKRPREPSET 374



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           RT +KV   G +VGR++D++    Y +L  EL +MF I+      L+  W++ F D E D
Sbjct: 591 RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKD-----LKQKWKVAFTDDEGD 645

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            + +GDDPW  F   V  I +   ED +K+
Sbjct: 646 TMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 675


>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
          Length = 827

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 177/372 (47%), Positives = 236/372 (63%), Gaps = 26/372 (6%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ     ++  +SH   Y +LPPQ+IC+
Sbjct: 37  CL--ELWHACAGPLISLPQKGSVVVYFPQGHLEQ-----HQVQESHTRTY-DLPPQIICR 88

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL-----------GIPSKQPTNYF 127
           + +V + A+V  DE+YAQ++L         D  V   L           GI    P + F
Sbjct: 89  VVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIP-HMF 147

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
           CKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL A+DL+   W+FRHI+RGQP
Sbjct: 148 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQP 207

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-PPTVMPSSVLSSDSMH 246
           +RHLLTTGWS F + K+L  GD+VLF+  +  +L LGIRRA R     +P + L      
Sbjct: 208 RRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQLSR 267

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
           + +L+  A A +    F +++NPRASP+EF++P  KY+++  H   S+GMR ++  ETE+
Sbjct: 268 VNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHP-FSMGMRLKIRVETED 326

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 366
           +  +RY G ITG+ D+DP+RW NS WR + V WD++       RVS WEIE  +    + 
Sbjct: 327 AVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSLVSSFS 386

Query: 367 SLFPLR--LKRP 376
             FPL+   KRP
Sbjct: 387 --FPLKSTSKRP 396



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 2/88 (2%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR   KVYK  S VGR++D+++ + Y++L  EL ++  +EG   DP R GWQ+V+ D  +
Sbjct: 720 TRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELERLLDMEGLLRDP-RKGWQVVYTDNVS 778

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           D++L+GD+PW+ F   V  I I + E+V
Sbjct: 779 DMMLVGDEPWQEFCDIVSKIHIFTREEV 806


>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
 gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
          Length = 739

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 171/360 (47%), Positives = 223/360 (61%), Gaps = 27/360 (7%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G   CL  ELWHACAGP+  LP  GT VVY PQGH E +                 LPP 
Sbjct: 50  GAAVCL--ELWHACAGPVAPLPRKGTVVVYLPQGHLEHLGDAAAAAAGGAPAPA-ALPPH 106

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP--------------- 119
           + C++ +VT+HAD  TDEVYAQ+ L      E +D    +  G                 
Sbjct: 107 VFCRVVDVTLHADASTDEVYAQLALV----AENEDVARRLRGGSEDGSAGDGDDGEAVKQ 162

Query: 120 --SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
             S+ P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW
Sbjct: 163 RFSRMP-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEW 221

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS 237
           +FRHI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       
Sbjct: 222 RFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAF 281

Query: 238 SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
             L +   ++G LA  AHA AT S F +++NPR S SEF+IP +K++K+ F  + S G+R
Sbjct: 282 PALYNQCSNLGSLANVAHAVATKSVFHIYYNPRLSQSEFIIPYSKFMKS-FSQQFSAGLR 340

Query: 298 FRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           F+M +E++++S RR  G I GI D DP+ W  S W+ + V WD+     R  R+S WEIE
Sbjct: 341 FKMRYESDDASERRCTGVIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRRPNRISPWEIE 399


>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
          Length = 699

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 166/366 (45%), Positives = 238/366 (65%), Gaps = 13/366 (3%)

Query: 24  LWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVT 83
           LW ACAGPLV +P    RV YF QGH EQ+   T+  + +       +P +++C++ NV 
Sbjct: 19  LWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCKVVNVE 78

Query: 84  MHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASDTSTHGGF 142
           + A+ ETDEV+AQ+TLQP  P+++    +P        +P  + FCK LT SDTSTHGGF
Sbjct: 79  LKAETETDEVFAQITLQP-DPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGF 137

Query: 143 SVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSA 202
           SV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 138 SVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTS 197

Query: 203 KRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSC 262
           K+L++GD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+A+HA  TNS 
Sbjct: 198 KKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIKTNSI 257

Query: 263 FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDL 322
           F V++ PR S S++++ + KY+ A      +VGMRF+M FE E+  V+++ GTI G  DL
Sbjct: 258 FLVYYRPRLSQSQYIVSVNKYL-AASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVGEGDL 316

Query: 323 DPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE------PLTTFPMYPSLFPLRLKRP 376
             ++WS S W+S+KV WDE T      RVS WEIE      P    P+  +    + KRP
Sbjct: 317 S-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQSA---TKNKRP 372

Query: 377 WHPSTS 382
             PS +
Sbjct: 373 REPSET 378



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           RT +KV   G +VGR++D++    Y +L  EL +MF I+      L+  W++ F D E D
Sbjct: 595 RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKD-----LKQKWKVAFTDDEGD 649

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            + +GDDPW  F   V  I +   ED +K+
Sbjct: 650 TMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 679


>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
 gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
          Length = 747

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 173/367 (47%), Positives = 230/367 (62%), Gaps = 29/367 (7%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQLICQ 78
           ELWHACAGPL+SLP  G+ VVY PQGH E            H+  YP    NLPP + C+
Sbjct: 55  ELWHACAGPLISLPKKGSAVVYLPQGHLE------------HLSEYPSIACNLPPHVFCR 102

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPE-EQK---------DTFVPIELGIPSKQPTNYFC 128
           + +V + AD  TDEVYAQ++L P + + EQK              IE    S  P + FC
Sbjct: 103 VVDVKLQADAATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKSITP-HMFC 161

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLTASDTSTHGGFSVPRRAAE  F  LD+  Q P+QEL+A+DLH +EWKFRHI+RGQP+
Sbjct: 162 KTLTASDTSTHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPR 221

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGWS FV+ K+LV+GD+VLF+     +L LG+RRA +  T        S  +++ 
Sbjct: 222 RHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSSYLAPCSKPLNVS 281

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
            +  A +  ++ + F + +NPR S S+F++P  K+ K + H   S GMRF+M  ETE+++
Sbjct: 282 GIVDAVNVISSRNAFNICYNPRDSSSDFIVPYHKFSKTLAHP-FSAGMRFKMRVETEDAA 340

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            +R+ G + G+S++DPVRW  S WR + V WD+     R  RVS WEIEP  + P+  SL
Sbjct: 341 EQRFTGLVVGVSNVDPVRWPGSKWRCLLVRWDDLDV-SRHNRVSPWEIEPSGSAPVPSSL 399

Query: 369 FPLRLKR 375
                KR
Sbjct: 400 VMPSAKR 406


>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
          Length = 1043

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 179/386 (46%), Positives = 239/386 (61%), Gaps = 25/386 (6%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH--IPNYPNLPPQLIC 77
           L +ELW ACAG  V +P V  RV YFPQGH EQVAA T  + DSH  IP Y +LP +++C
Sbjct: 411 LYTELWRACAGSFVYVPRVDDRVFYFPQGHLEQVAAYTQNQPDSHLEIPVY-DLPSKILC 469

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTF-----VPIELGIPSKQPTNYFCKTLT 132
           ++ NV + A+  +DEVYAQ+TL    PE QKD       V I+  IPS+     F K LT
Sbjct: 470 KIMNVELKAEAYSDEVYAQVTL---VPEVQKDNLCFEEEVNID-QIPSRNAAYSFSKILT 525

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
            SDTSTHGGFSVP++ A++ FP LD +LQ PAQE++A+DL+  EW+FRHI+RGQPKRHLL
Sbjct: 526 PSDTSTHGGFSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEWRFRHIYRGQPKRHLL 585

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM--PSSVLSSDSMHIGLL 250
           T+GWS+FV+AK+LVAGDS +F+  E  +L +GIRRA    + +   SS++S  SM +G+L
Sbjct: 586 TSGWSLFVNAKKLVAGDSCIFVRGESGELRVGIRRAAENLSNISQSSSLISGHSMQLGIL 645

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
             A++A    + F V++ P  +P EF++ L  Y+K+       +G R +M  E EE S+R
Sbjct: 646 TNASNAVGNRTMFLVYYRPWTNPFEFIVHLQTYLKSTLQD-YPIGTRVQMQHEVEE-SLR 703

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIEPLTTFPMYPSLF 369
           R  GTI G  D+D +RW  S WR +KV WD     +  P RV  W IEPL +      + 
Sbjct: 704 RLAGTIIGNEDIDSIRWPGSAWRRLKVQWDAIVEDKMHPERVCPWWIEPLESAKEKKQVP 763

Query: 370 PLRLKRPWH--------PSTSSFNDN 387
            L  K+  H        P  S F  N
Sbjct: 764 ALPTKKKGHALLNQRSLPGISGFGKN 789



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 691  RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
            R+  KV K G ++GR++D++RF+ Y EL  EL  MF  +G       SGW +  +D E D
Sbjct: 965  RSCTKVLKLGNALGRAVDLARFNGYTELIAELDSMFDFQGTLISG-GSGWHVTCLDDEGD 1023

Query: 750  VLLLGDDPWE 759
            ++ LGD PW+
Sbjct: 1024 MMQLGDYPWQ 1033


>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
 gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
          Length = 844

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 173/365 (47%), Positives = 240/365 (65%), Gaps = 13/365 (3%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L +ELW+ACAGPLV++P     V YFPQGH EQV A+TN+  D  +P Y NLP +++C
Sbjct: 50  KALYTELWNACAGPLVTVPRENELVYYFPQGHIEQVEASTNQLADQQMPVY-NLPSKILC 108

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           ++ NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTS
Sbjct: 109 RVINVQLKAEPDTDEVFAQVTLLPEPIQDENAVKKDPPQPPPPRFHVHSFCKTLTASDTS 168

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSV RR A++  P L  S+   + E + R L D+      +  GQP+RHLL +GWS
Sbjct: 169 THGGFSVLRRHADECLPPL-VSIN--STEFV-RCLIDIIM----LIPGQPRRHLLQSGWS 220

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA 
Sbjct: 221 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 280

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
           +T + FTV++ PR SP+EF++P  +Y+++V      +GMRF+M FE EE+  +R+ GTI 
Sbjct: 281 STGTLFTVYYKPRTSPAEFIVPFDRYMESV-KNNYCIGMRFKMRFEGEEAPEQRFTGTIV 339

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 377
           GI D D  RW  S WRS+KV WDE++   R  RVS W +EP       P+L PL + RP 
Sbjct: 340 GIEDADSKRWRESKWRSLKVRWDETSTIPRPDRVSPWSVEPALA---PPALNPLPVPRPK 396

Query: 378 HPSTS 382
            P ++
Sbjct: 397 RPRSN 401



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 7/142 (4%)

Query: 639 PTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYK 698
           P  + S   S  P VS M   D   H   +   Q       ++    Q   TR+  KV+K
Sbjct: 671 PRALESDQRSEQPRVSKM--ADDNEHEKQF---QSGHLHTRDIQGKTQTGSTRSCTKVHK 725

Query: 699 SG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDP 757
            G ++GRS+D+++F++Y+EL  EL ++F   G+   P +  W +V+ D E D++L+GDDP
Sbjct: 726 QGIALGRSVDLAKFNNYDELIAELDRLFEFGGELISP-KKNWLIVYTDDEGDMMLVGDDP 784

Query: 758 WEAFVSNVWYIKILSPEDVQKM 779
           W+ FV  V  I I + E+VQKM
Sbjct: 785 WQEFVGMVRKIFIYTREEVQKM 806


>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
          Length = 730

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 171/350 (48%), Positives = 223/350 (63%), Gaps = 23/350 (6%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  +P  G+ VVYFPQGH EQ+            P+       + C+
Sbjct: 66  CL--ELWHACAGPVAPMPRKGSVVVYFPQGHLEQLGGDAAAANAPVPPH-------VFCR 116

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-----------SKQPTNYF 127
           + +V++HAD  TDEVYAQ++L P + E  +      E G             S+ P + F
Sbjct: 117 VVDVSLHADASTDEVYAQLSLLPENEEAVRRKREGAEEGSGGEDGETGKQRFSRMP-HMF 175

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
           CKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL A+DLH  EWKFRHI+RGQP
Sbjct: 176 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIYRGQP 235

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 247
           +RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +  T      L S   ++
Sbjct: 236 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLYSQCSNL 295

Query: 248 GLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES 307
           G LA  AHA AT   F +++NPR S SEF++P  K+ K++     SVG+RF+M +E+E++
Sbjct: 296 GTLANVAHAVATKGMFRIYYNPRLSQSEFIVPYWKFTKSLSQP-FSVGLRFKMRYESEDA 354

Query: 308 SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           + RRY G ITG  D DP+ W  S W+ + V WD+     R  RVS WEIE
Sbjct: 355 AERRYTGIITGTGDADPM-WRGSKWKCLLVRWDDDVECRRPNRVSPWEIE 403


>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
          Length = 602

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 170/347 (48%), Positives = 237/347 (68%), Gaps = 20/347 (5%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +  ELW   AGPLV +P    RV YFPQGH EQ+ A+T +++++  P + +LPP+++C++
Sbjct: 1   MYEELWKLSAGPLVDVPQAEERVYYFPQGHMEQLEASTQQDLNTMKPLF-DLPPKILCRV 59

Query: 80  HNVTMHADVETDEVYAQMTL-------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 132
            NV + A+ +TDEVYAQ+ L       +P+SP+       P EL  P     + F K LT
Sbjct: 60  MNVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPS-----PPELQKPK---FHSFTKVLT 111

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RHLL
Sbjct: 112 ASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIFRGQPRRHLL 171

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS FV++K+LVAGD+ +F+  E  +L +G+RRA R  + MPSSV+SS SMH+G+LA 
Sbjct: 172 TTGWSTFVTSKKLVAGDTFVFLRGENGELRVGVRRANRQQSSMPSSVISSHSMHLGVLAT 231

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           A HA  T S FTV++ PR   S+F++ L KY++A+ +++ SVGMRF+M FE ++S  RR+
Sbjct: 232 ACHATQTRSMFTVYYKPRT--SQFILSLHKYLEAM-NSKFSVGMRFKMRFEGDDSPERRF 288

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
            GT+ G+ D  P  W +S WRS+ V WDE  +  R  +VS WE+EP 
Sbjct: 289 SGTVVGVQDCSP-HWKDSKWRSLIVNWDEPASFTRPDKVSPWEMEPF 334



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 25/217 (11%)

Query: 576 QQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDA-AVGTENCNTDSQNSVVFGVHIDSS 634
            +F Q  + S+  P Q  D+   +S  S+ NG+    V  +   T + +  +FG+ + SS
Sbjct: 373 HEFAQSCITSQRNPPQNSDW--PVSPYSTLNGQMVFPVEQKKPETTTASCRLFGIDLMSS 430

Query: 635 GL---------LLPTTVS--SFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQ 683
            L         + P  ++  +  ++ DP      L +           Q+ ++      Q
Sbjct: 431 SLPAHEEKTAPMRPINITKPTLDSNADPKSEISKLSEEK--------KQEPAQASPKEVQ 482

Query: 684 IDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 742
             Q+  +R+  KV   G  VGR++D++  + Y EL ++L ++F IEG+ +   R+ W++V
Sbjct: 483 SKQINSSRSRTKVQMQGVPVGRAVDLTLINGYVELIDDLEKLFDIEGELKS--RNQWEIV 540

Query: 743 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           F D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 541 FTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 577


>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
 gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
          Length = 667

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 160/309 (51%), Positives = 218/309 (70%), Gaps = 8/309 (2%)

Query: 52  QVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTF 111
           Q+ A+TN+E+   IP + NLP +++C++ ++ + A+ ETDEVYAQ+TL P    +Q +  
Sbjct: 66  QLEASTNQELTQQIPKF-NLPSKILCRVVHIHLLAEQETDEVYAQITLHP--EVDQTEPT 122

Query: 112 VPIELG-IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIAR 170
            P +    P K+P + FCK LTASDTSTHGGFSV R+ A +  P LD +   P QEL+A+
Sbjct: 123 SPDQCTPEPQKRPVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQSIPTQELVAK 182

Query: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           DLH  EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ ++  +L +G+RR  R
Sbjct: 183 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRSDNGELRVGVRRLAR 242

Query: 231 PPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 290
             + MPSSV+SS SMH+G+LA A+HA  T + F V++ PR   S+F+I L KY++AV H 
Sbjct: 243 QQSPMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRT--SQFIIGLNKYLEAVNHG 300

Query: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR 350
             S+GMRF+M FE E+S  RR+MGTI G+ D  P  WS S WRS+K+ WDE    +R  R
Sbjct: 301 -FSLGMRFKMRFEGEDSPERRFMGTIVGVGDFSP-EWSGSKWRSLKIQWDEPATVQRPDR 358

Query: 351 VSLWEIEPL 359
           VS WEIEP 
Sbjct: 359 VSPWEIEPF 367



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 3/93 (3%)

Query: 688 TPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           T TRT  KV   G +VGR++D++    Y +L +EL ++F I+G+     R  W +VF D 
Sbjct: 549 TSTRTRTKVQMQGVAVGRAVDLTALKGYGDLIKELEELFEIKGELS--TREKWAVVFTDD 606

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           E D++L+GDDPW  F   V  I I S E+ +K+
Sbjct: 607 EGDMMLVGDDPWREFCKMVRKILIYSSEEAKKL 639


>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 731

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 223/349 (63%), Gaps = 17/349 (4%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  +P  G+ VVY PQGH + +    +    +       +PP + C+
Sbjct: 66  CL--ELWHACAGPVAPMPRKGSVVVYLPQGHLDHLG---DAPAHAAASPAAAVPPHVFCR 120

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPE------EQKDTFVPIELGIPSKQP----TNYFC 128
           + +VT+HAD  TDEVYAQ++L P + E      E  D     E G   KQ      + FC
Sbjct: 121 VVDVTLHADATTDEVYAQLSLLPENEELVRRMREATDDVSGGEDGETVKQRFARMPHMFC 180

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLTASDTSTHGGFS PRRAAE  FP LD++ Q P+QEL+A+DLH  EWKFRHI+RGQP+
Sbjct: 181 KTLTASDTSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYRGQPR 240

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA++         L S   ++G
Sbjct: 241 RHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLG 300

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
            LA   HA +T S F +F+NPR S SEF++P  K+ K++     SVG RF+M +E+E+++
Sbjct: 301 TLANVTHAVSTKSMFQIFYNPRLSQSEFIVPYWKFTKSISQP-FSVGWRFKMRYESEDAA 359

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            RRY G ITG  D DP RW  S W+ + V WD+     R  R+S WEIE
Sbjct: 360 ERRYTGIITGTVDADP-RWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIE 407


>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 733

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 159/315 (50%), Positives = 218/315 (69%), Gaps = 5/315 (1%)

Query: 65  IPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT 124
           +P Y +L P+++C++ NV + A+ +TDEV+AQ+TL P   +++           P +   
Sbjct: 1   MPVY-DLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHV 59

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFR
Sbjct: 60  HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFR 119

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS S
Sbjct: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 179

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           MH+G+LA A HA  T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE 
Sbjct: 180 MHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEG 238

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
           EE+  +R+ GTI GI D D  RW  S WR +KV WDE++   R  RVS W+IEP      
Sbjct: 239 EEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA--- 295

Query: 365 YPSLFPLRLKRPWHP 379
            P+L PL + RP  P
Sbjct: 296 PPALNPLPMPRPKRP 310



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 671 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 729
           +Q S   + +V    Q    R+  KV+K G ++GRS+D+++FS Y+EL  EL Q+F   G
Sbjct: 590 LQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRG 649

Query: 730 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           +   P +  W +VF D E D++L+GDDPW+ F S V  I I   E++QKM
Sbjct: 650 ELISPQKD-WLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKM 698


>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
          Length = 326

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 157/294 (53%), Positives = 214/294 (72%), Gaps = 3/294 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y +L  +++C++
Sbjct: 34  LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIY-DLRSKILCRV 92

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            NV + A  +TDEV+AQ+TL P   +++          +  +   + FCKTLTASDTSTH
Sbjct: 93  INVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTH 152

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSV RR AE+  P LD S QPP Q+L+A+DLH  EW+FRHIFRGQP+RHLL +GWSVF
Sbjct: 153 GGFSVLRRHAEECLPVLDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 212

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           VS+KRLVAGD+ +F+  EK +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +T
Sbjct: 213 VSSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 271

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
            + FTV++ PR SP+EF++P  +Y+++V  +  S+GMRF+M FE EE+  +R +
Sbjct: 272 GTMFTVYYKPRISPAEFIVPFDQYMESV-KSNYSIGMRFKMRFEGEEAPEQRLV 324


>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
 gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
           protein 2; AltName: Full=OsETTIN2
 gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
 gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
          Length = 718

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 166/358 (46%), Positives = 224/358 (62%), Gaps = 22/358 (6%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           +   G   CL  ELWHACAGP+  LP  G+ VVY PQGH E + A       + +P    
Sbjct: 29  EARAGGAVCL--ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSGPGAAVP---- 82

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK-----------DTFVPIELGIP 119
             P + C++ +V++HAD  TDEVYAQ++L   + E ++           D      +  P
Sbjct: 83  --PHVFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRP 140

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++ P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+SLQ P QEL+A+DLH  EW+F
Sbjct: 141 ARIP-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRF 199

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           RHI+RGQP+RHLLTTGWS F++ K+LV+GD+VLF+  E  +L LG+RRA +     P   
Sbjct: 200 RHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPA 259

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           L +   +   L+  AHA A  S F +++NPR S SEF+IP  K++++ F    SVGMRF+
Sbjct: 260 LHNQISNTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRS-FSQPFSVGMRFK 318

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           + +E+E++S RR  G I G  + DP+ W  S W+ + V WD+     R   VS WEIE
Sbjct: 319 LRYESEDASERRRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIE 375


>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
 gi|223975541|gb|ACN31958.1| unknown [Zea mays]
          Length = 766

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/317 (49%), Positives = 220/317 (69%), Gaps = 7/317 (2%)

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS---KQPTNY 126
           +LP +++C++ NV + A+ + DEVYAQ+TL P S  E+  +   +    P+   +   + 
Sbjct: 5   DLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHS 64

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           FCKTLTASDTSTHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+FRHIFRGQ
Sbjct: 65  FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQ 124

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 246
           P+RHLL +GWSVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV+SS SMH
Sbjct: 125 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMH 184

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
           +G+LA A HA  T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+M FE EE
Sbjct: 185 LGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFKMRFEGEE 243

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 366
           +  +R+ GTI G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP  +    P
Sbjct: 244 APEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS---PP 300

Query: 367 SLFPLRLKRPWHPSTSS 383
            + PL + RP  P +++
Sbjct: 301 PINPLPVHRPKRPRSNA 317



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 632 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 690

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
           D++L+GDDPW  F S V  I + + E+VQ+M    + S    SG
Sbjct: 691 DMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSRPEDSG 734


>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
          Length = 736

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 165/351 (47%), Positives = 221/351 (62%), Gaps = 18/351 (5%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +         +       LPP + C+
Sbjct: 50  CL--ELWHACAGPVAPLPRKGSVVVYLPQGHIEHLGDAAAAGGGAP--PPVALPPHVFCR 105

Query: 79  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQP----TNY 126
           + +VT+HAD  TDEVYAQ+ L        + L    +  +    + G   KQ      + 
Sbjct: 106 VVDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHM 165

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQ
Sbjct: 166 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQ 225

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 246
           P+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +  ++
Sbjct: 226 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLN 285

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
           +G L   AHA AT S F +++NPR S SEF+IP +K++K+ F    S G RF++ +E+++
Sbjct: 286 LGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKS-FSQPFSAGSRFKVKYESDD 344

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           +S RR  G I GI D DP+ W  S W+ + V WD+     +  R+S WEIE
Sbjct: 345 ASERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE 394


>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
          Length = 736

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 165/351 (47%), Positives = 221/351 (62%), Gaps = 18/351 (5%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +         +       LPP + C+
Sbjct: 50  CL--ELWHACAGPVAPLPRKGSVVVYLPQGHIEHLGDAAAAGGGAP--PPVALPPHVFCR 105

Query: 79  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQP----TNY 126
           + +VT+HAD  TDEVYAQ+ L        + L    +  +    + G   KQ      + 
Sbjct: 106 VVDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHM 165

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQ
Sbjct: 166 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQ 225

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 246
           P+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +  ++
Sbjct: 226 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLN 285

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
           +G L   AHA AT S F +++NPR S SEF+IP +K++K+ F    S G RF++ +E+++
Sbjct: 286 LGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKS-FSQPFSAGSRFKVKYESDD 344

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           +S RR  G I GI D DP+ W  S W+ + V WD+     +  R+S WEIE
Sbjct: 345 ASERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE 394


>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
          Length = 712

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 165/345 (47%), Positives = 217/345 (62%), Gaps = 16/345 (4%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  LP  G  VVY PQGH E +         +           + C+
Sbjct: 36  CL--ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPP-----HVFCR 88

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP------SKQPTNYFCKTLT 132
           + +VT+ AD  TDEVYAQ++L P   E  +                 ++ P + FCKTLT
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMP-HMFCKTLT 147

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQP+RHLL
Sbjct: 148 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLL 207

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +   ++G LA 
Sbjct: 208 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLAN 267

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            AHA AT S F +++NPR S SEF++P  K++K++     SVG+RF+M +E+E++S RRY
Sbjct: 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQP-FSVGLRFKMRYESEDASERRY 326

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            G ITG  D DP+ W  S W+ + V WD+     R  RVS WEIE
Sbjct: 327 TGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE 370


>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
          Length = 719

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/345 (47%), Positives = 217/345 (62%), Gaps = 16/345 (4%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  LP  G  VVY PQGH E +         +           + C+
Sbjct: 36  CL--ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPP-----HVFCR 88

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP------SKQPTNYFCKTLT 132
           + +VT+ AD  TDEVYAQ++L P   E  +                 ++ P + FCKTLT
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMP-HMFCKTLT 147

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQP+RHLL
Sbjct: 148 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLL 207

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +   ++G LA 
Sbjct: 208 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLAN 267

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            AHA AT S F +++NPR S SEF++P  K++K++     SVG+RF+M +E+E+++ RRY
Sbjct: 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQP-FSVGLRFKMRYESEDATERRY 326

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            G ITG  D DP+ W  S W+ + V WD+     R  RVS WEIE
Sbjct: 327 TGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE 370


>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
 gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
           protein 1; AltName: Full=OsETTIN1
 gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
 gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
 gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
          Length = 712

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/345 (47%), Positives = 217/345 (62%), Gaps = 16/345 (4%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  LP  G  VVY PQGH E +         +           + C+
Sbjct: 36  CL--ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPP-----HVFCR 88

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP------SKQPTNYFCKTLT 132
           + +VT+ AD  TDEVYAQ++L P   E  +                 ++ P + FCKTLT
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMP-HMFCKTLT 147

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQP+RHLL
Sbjct: 148 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLL 207

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +   ++G LA 
Sbjct: 208 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLAN 267

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            AHA AT S F +++NPR S SEF++P  K++K++     SVG+RF+M +E+E+++ RRY
Sbjct: 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQP-FSVGLRFKMRYESEDATERRY 326

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            G ITG  D DP+ W  S W+ + V WD+     R  RVS WEIE
Sbjct: 327 TGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE 370


>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
          Length = 714

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 167/353 (47%), Positives = 225/353 (63%), Gaps = 17/353 (4%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           +   G   CL  ELWHACAGP+  LP  G+ VVY PQGH E + A       + +P +  
Sbjct: 29  EARAGGAVCL--ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGPAAVAAVPPH-- 84

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPE------EQKDTFVPIELGIPSKQPT 124
               + C++ +V++HAD  TDEVYAQ++L   + E      E +D      +  P++ P 
Sbjct: 85  ----VFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGEGEDAVKRPARIP- 139

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+SLQ P+QEL+A+DLH  EW+FRHI+R
Sbjct: 140 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYR 199

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLLTTGWS F++ K+LV+GD+VLF+  E  +L LG+RRA +   V P   L +  
Sbjct: 200 GQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQI 259

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
                L+  AHA A  S F +++NPR S SEF+IP  K++++ F    SVGMRF++ +E+
Sbjct: 260 SSTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRS-FSQPFSVGMRFKLRYES 318

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           E++S RR  G I G  + DP+ W  S W+ + V WD+     R   VS WEIE
Sbjct: 319 EDASERRRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIE 370


>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
          Length = 826

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 171/356 (48%), Positives = 225/356 (63%), Gaps = 34/356 (9%)

Query: 52  QVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE----- 106
           QV A+TN+  +       NLP ++ C++ NV + A+ +TDEVYAQ+TL P   ++     
Sbjct: 27  QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSG 86

Query: 107 ----QKDTFVPIELGIPS---KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL--- 156
                KD     E+  P+   +   + FCKTLTASDTSTHGGFSV RR A++  P L   
Sbjct: 87  NGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSF 146

Query: 157 ----------------DFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFV 200
                           D S  PP QEL+A+DLH VEW+FRHIFRGQP+RHLL +GWSVFV
Sbjct: 147 FDRLIVAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 206

Query: 201 SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATN 260
           SAKRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  T 
Sbjct: 207 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTG 266

Query: 261 SCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 320
           + FTV++ PR SPSEFV+P   Y K       S+GMRF+M FE EE++ +R+ GTI G+ 
Sbjct: 267 TMFTVYYKPRTSPSEFVVPRDLY-KESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVG 325

Query: 321 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 375
           D DP  W++S WRS+KV WDE+ +  R  RVS W+IEP  +  P+ P   P R KR
Sbjct: 326 DSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAP-RTKR 380



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 625 VVFGVHIDSSG---LLLPTTVSSFTTSV-----------DPGVSSMPLGDSGFHNSMYGC 670
           ++FG+ +DS     LL+     +F   +           DP  +  PL D   H+S    
Sbjct: 619 MLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPL-DGAQHDSAREK 677

Query: 671 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 729
            Q   +   N+    Q   +R+  KV+K G ++GRS+D+++F+ Y+EL  EL QMF   G
Sbjct: 678 HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNG 737

Query: 730 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSP 789
           +     ++ W +V+ D E D++L+GDDPW  F + V  I I + E+VQKM    + S S 
Sbjct: 738 ELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSE 796

Query: 790 SSGQRANSRGNCGRDPVGSL 809
            S   +  RG  G    G L
Sbjct: 797 DSRSTSVERGLVGEGLQGGL 816


>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
          Length = 701

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 162/344 (47%), Positives = 224/344 (65%), Gaps = 2/344 (0%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G +  L SELW ACAGPLV LP  G RV YF QGH EQV   ++++V +       +P +
Sbjct: 6   GRDAELFSELWRACAGPLVELPQPGQRVFYFLQGHLEQVQQPSDQKVLADQIKMFQVPYK 65

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           ++C++ NV + A+VET+EVYAQ+TL P   +E   +     L    +   + F K LT S
Sbjct: 66  ILCRVVNVELKAEVETEEVYAQITLLPEQDQEYLPSSPDPPLPEVRRPVVHSFSKILTPS 125

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSV RR A +  P LD S+  P QELI +D+   EW+F+HI+RGQP+RHLLTT
Sbjct: 126 DTSTHGGFSVLRRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQPRRHLLTT 185

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GWS FV++K+LV GD+ +++  E+ +  +G+R  ++  T MPSSV+SS SMH+G+LA+A+
Sbjct: 186 GWSTFVTSKKLVYGDAFVYLRTEEGEQRVGVRHHVQKRTAMPSSVMSSQSMHLGVLASAS 245

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
           HA  T S F V++ PR S S++++ + KY       R +VG+RF+M FE EE  V+++ G
Sbjct: 246 HALQTKSIFLVYYRPRVSQSQYIVNVNKYF-LTSKLRYTVGVRFKMSFEGEEVPVKKFSG 304

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           TI G   L P +WS S W+S KV WD+        RVS WEIEP
Sbjct: 305 TIVGDGALSP-QWSCSEWKSKKVQWDDPANCNGPERVSPWEIEP 347



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 20/163 (12%)

Query: 626 VFGVHIDSSGLLLPTTVSSFTTSVDPGVSSM------PLGDSGFHNSMYGCMQDSSELLH 679
           +FGV+     L+ PT+ ++   +   G          P  +SG  +++    +D   +  
Sbjct: 528 LFGVN-----LMKPTSGTATADNAGAGAGETSARVAGPCEESGQVSALSRVTKDHKVVNE 582

Query: 680 NVGQI--DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 736
           +  +I  +Q    R  VKV   G +VGR++D++    Y +L  EL QMF I+      ++
Sbjct: 583 SPREIQSNQSCIARNRVKVQMHGNAVGRAVDLANLDGYEQLIRELEQMFDIKD-----IK 637

Query: 737 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
             +++ F D + D + +GDDPW  F   V  I ++ P + +KM
Sbjct: 638 QNFKVAFADNDGDTMKVGDDPWMEFCRMVKKI-VIYPLEEEKM 679


>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
          Length = 840

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 170/348 (48%), Positives = 222/348 (63%), Gaps = 27/348 (7%)

Query: 53  VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLS--PEEQKDT 110
           V A+TN+  +       NLP ++ C++ NV + A+ +TDEVYAQ+TL P        KD 
Sbjct: 49  VEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYGNVSKDK 108

Query: 111 FVPIELGIPS---KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL----------- 156
               E+  P+   +   + FCKTLTASDTSTHGGFSV RR A++  P L           
Sbjct: 109 VEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVAM 168

Query: 157 --------DFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAG 208
                   D S  PP QEL+A+DLH VEW+FRHIFRGQP+RHLL +GWSVFVSAKRLVAG
Sbjct: 169 PLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAG 228

Query: 209 DSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFN 268
           D+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  T + FTV++ 
Sbjct: 229 DAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYK 288

Query: 269 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWS 328
           PR SPSEFV+P   Y K       S+GMRF+M FE EE++ +R+ GTI G+ D DP  W+
Sbjct: 289 PRTSPSEFVVPRDLY-KESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWA 347

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 375
           +S WRS+KV WDE+ +  R  RVS W+IEP  +  P+ P   P R KR
Sbjct: 348 DSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAP-RTKR 394



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 625 VVFGVHIDSSG---LLLPTTVSSFTTSV-----------DPGVSSMPLGDSGFHNSMYGC 670
           ++FG+ +DS     LL+     +F   +           DP  +  PL D   H+S    
Sbjct: 633 MLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPL-DGAQHDSATEK 691

Query: 671 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 729
            Q   +   N+    Q   +R+  KV+K G ++GRS+D+++F+ Y+EL  EL QMF   G
Sbjct: 692 HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNG 751

Query: 730 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSP 789
           +     ++ W +V+ D E D++L+GDDPW  F + V  I I + E+VQKM    + S S 
Sbjct: 752 ELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSE 810

Query: 790 SSGQRANSRGNCGRDPVGSL 809
            S   +  RG  G    G L
Sbjct: 811 DSRSTSVERGLVGEGLRGGL 830


>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 750

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 155/304 (50%), Positives = 211/304 (69%), Gaps = 11/304 (3%)

Query: 81  NVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TNYFCKTL 131
           N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  + FCKTL
Sbjct: 2   NIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTL 61

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRGQP+RHL
Sbjct: 62  TASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHL 121

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS +MH+G+LA
Sbjct: 122 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVLA 181

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
            A HA  T+S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE EE++ +R
Sbjct: 182 TAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGEEAAEQR 240

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           + GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P + +  P+
Sbjct: 241 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCHVNPLPV 299

Query: 372 RLKR 375
           R KR
Sbjct: 300 RFKR 303



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 672 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 730
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 603 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 662

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 790
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 663 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 721

Query: 791 SGQRANSRGNCGRDPVG 807
           S   +  RG   RDP G
Sbjct: 722 SLSDSLGRGVASRDPRG 738


>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
          Length = 641

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 168/338 (49%), Positives = 232/338 (68%), Gaps = 11/338 (3%)

Query: 53  VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV 112
           + A+TN+E++  +P + NLPP+++CQ+ +  + A+ ++DEVYAQ+TL P + +    TF 
Sbjct: 3   LEASTNQELNQKLPLF-NLPPKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPSTFE 61

Query: 113 P--IELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIAR 170
           P  IE     K   + FCK LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A+
Sbjct: 62  PPLIEC---RKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAK 118

Query: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           DLH  EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGDS +F+  E  +L +G+RR  R
Sbjct: 119 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLAR 178

Query: 231 PPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 290
             + MPSSV+SS SMH+G+LA A+HA +T + F V++ PRA  S+F++ L+KY++A+ + 
Sbjct: 179 QQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRA--SQFIVSLSKYMEAM-NN 235

Query: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR 350
           +  VGMRF+M FE EES  RR+ GTI G+ D+ P  W NS WRS++V WDE  + +R  R
Sbjct: 236 KFMVGMRFKMRFEGEESPERRFSGTIVGVDDMSP-HWPNSEWRSLRVQWDELASIQRPDR 294

Query: 351 VSLWEIEPLTT-FPMYPSLFPLRLKRPWHPSTSSFNDN 387
           VS WEIEP     P  P    ++ KRP  P     +DN
Sbjct: 295 VSPWEIEPFVAPTPSIPHSISVKNKRPRPPLEIPDSDN 332



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 3/80 (3%)

Query: 701 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 760
           +VGR++D++    Y +L +EL +MF I+G+     R+ W++VF D E D++L+GD PW+ 
Sbjct: 541 AVGRAVDLTTLEGYGQLIDELEKMFDIKGELRP--RNKWEIVFTDDEGDMMLMGDYPWQE 598

Query: 761 FVSNVWYIKILSPEDVQKMG 780
           F + V  I I S +DV KMG
Sbjct: 599 FCNMVRRIYIWSSQDV-KMG 617


>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
 gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
          Length = 702

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 165/356 (46%), Positives = 220/356 (61%), Gaps = 24/356 (6%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G   CL  ELWHACAGP+  LP  G+ VVY PQGH E +    +    +       +PP 
Sbjct: 30  GGAVCL--ELWHACAGPVAPLPRKGSAVVYLPQGHLEHIGGDADAAGAA-------VPPH 80

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ----------KDTFVPIELGI---PSK 121
           ++C++ +VT+HAD  TDEVYA+++L P   E +          +D     E G    P  
Sbjct: 81  VLCRVVDVTLHADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAMKPLA 140

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           +  + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRH
Sbjct: 141 RTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRH 200

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLS 241
           I+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E   L LG+RRA +   V P   L 
Sbjct: 201 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPALH 260

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           +       L   A A AT + F +++NPR S SEF++P  K+ ++  +  +SVGMR RM 
Sbjct: 261 NQCSSQTTLGNVAQAVATRTVFHIYYNPRLSQSEFIVPYWKFTRS-LNQPISVGMRCRMR 319

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           +E++++S RR  G I G  + +P+ W  S W+ + V WD+        RVS WEIE
Sbjct: 320 YESDDASERRCTGIIIGSREAEPI-WYGSKWKCLVVRWDDGIECHWPNRVSPWEIE 374


>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 588

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 221/350 (63%), Gaps = 39/350 (11%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP + C+
Sbjct: 50  CL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPHVFCR 99

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPE---EQKDTFVPIELG------IPSKQPTNYFCK 129
           + +V +HA+  TDEVYAQ++L P S +   + ++  + ++ G      +      + FCK
Sbjct: 100 ILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCK 159

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RGQP+R
Sbjct: 160 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRR 219

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-PPTVMPSSVLSSDSMHIG 248
           HLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +   T+MP            
Sbjct: 220 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTLMP------------ 267

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
                 +     S FT   +  AS S F+IP  K++K V +    +GMRF+   E+E++S
Sbjct: 268 ------YRPIVFSAFTTTNHNWASWSNFIIPAPKFLKIVDYP-FCIGMRFKARVESEDAS 320

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
            RR  G ITGISDLDP+RW  S WR + V WD+  A   Q RVS WEIEP
Sbjct: 321 ERRSPGIITGISDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEP 370


>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
 gi|224033653|gb|ACN35902.1| unknown [Zea mays]
 gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
 gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
          Length = 708

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 164/357 (45%), Positives = 221/357 (61%), Gaps = 31/357 (8%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +     +   +       +PP ++C+
Sbjct: 32  CL--ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAAS-----AVPPHVLCR 84

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--------------IPSKQPT 124
           + +VT+HAD  TDEVYA+++L P   + +K       +                P  +  
Sbjct: 85  VVDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTP 144

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+R
Sbjct: 145 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYR 204

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA----IRPPTVMPSSVL 240
           GQP+RHLLTTGWS FV+ K+L++GD+VLF+  E   L LG+RRA    I  P   P +  
Sbjct: 205 GQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQC 264

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SS+S     L   A A AT + F +++NPR + SEF++P  K+ ++ F+  +SVGMR RM
Sbjct: 265 SSNSN----LGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRS-FNQPISVGMRCRM 319

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            +E++++S RR  G I G  + DP+ W  S W+ + V WD+        RVS WEIE
Sbjct: 320 RYESDDASERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIE 375


>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
          Length = 698

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 164/357 (45%), Positives = 221/357 (61%), Gaps = 31/357 (8%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +     +   +       +PP ++C+
Sbjct: 32  CL--ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAAS-----AVPPHVLCR 84

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--------------IPSKQPT 124
           + +VT+HAD  TDEVYA+++L P   + +K       +                P  +  
Sbjct: 85  VVDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTP 144

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+R
Sbjct: 145 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYR 204

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA----IRPPTVMPSSVL 240
           GQP+RHLLTTGWS FV+ K+L++GD+VLF+  E   L LG+RRA    I  P   P +  
Sbjct: 205 GQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQC 264

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           SS+S     L   A A AT + F +++NPR + SEF++P  K+ ++ F+  +SVGMR RM
Sbjct: 265 SSNSN----LGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRS-FNQPISVGMRCRM 319

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            +E++++S RR  G I G  + DP+ W  S W+ + V WD+        RVS WEIE
Sbjct: 320 RYESDDASERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIE 375


>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
          Length = 674

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/344 (45%), Positives = 217/344 (63%), Gaps = 15/344 (4%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LWHACAGP+VSLP  G+ VVY PQGH     A      +  +     LPP + C++ +V
Sbjct: 25  DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGRIRGEVAVA----LPPHVACRVVDV 80

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKD---------TFVPIELGIPSKQPTNYFCKTLTA 133
            + AD  TDEVYA++ L+      +++           +         +  + FCKTLTA
Sbjct: 81  ELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTA 140

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAE  FP LD     P+QEL+A+DLH  +W+FRHI+RGQP+RHLLT
Sbjct: 141 SDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 200

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +          SS+S  +  L+A 
Sbjct: 201 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAV 260

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A +    S F + +NPRA+ SE+V+P  K+VK+  H  V +GMRF+  +E+E+ + RR  
Sbjct: 261 ADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHP-VCIGMRFKFHYESEDVNERR-S 318

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           G I G+S++DP+RW  S WRS+ V W+++T    Q RVS WEIE
Sbjct: 319 GMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE 362


>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
 gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
 gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
 gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
 gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
 gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 731

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 158/344 (45%), Positives = 217/344 (63%), Gaps = 15/344 (4%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LWHACAGP+VSLP  G+ VVY PQGH     A      +  +     LPP + C++ +V
Sbjct: 82  DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVA----LPPHVACRVVDV 137

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKD---------TFVPIELGIPSKQPTNYFCKTLTA 133
            + AD  TDEVYA++ L+      +++           +         +  + FCKTLTA
Sbjct: 138 ELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTA 197

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAE  FP LD     P+QEL+A+DLH  +W+FRHI+RGQP+RHLLT
Sbjct: 198 SDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 257

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +          SS+S  +  L+A 
Sbjct: 258 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAV 317

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A +    S F + +NPRA+ SE+V+P  K+VK+  H  V +GMRF+  FE+E+ + RR  
Sbjct: 318 ADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHP-VCIGMRFKFHFESEDVNERR-S 375

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           G I G+S++DP+RW  S WRS+ V W+++T    Q RVS WEIE
Sbjct: 376 GMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE 419


>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
          Length = 744

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 170/365 (46%), Positives = 219/365 (60%), Gaps = 46/365 (12%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWH CAG L SLP  G  VVYFPQGH EQ AA+++      I  + +LPPQ+ C++ NV
Sbjct: 55  ELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTF-DLPPQIFCRVVNV 112

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL-----------GIPSKQPTNYFCKTL 131
            + A+ E DEVY Q+TL P  PE         EL           G P+K   + FCKTL
Sbjct: 113 QLLANKENDEVYTQVTLLP-QPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKTL 171

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           TASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEW+FRHI+RGQP+RHL
Sbjct: 172 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 231

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P S++ + + +  +L+
Sbjct: 232 LTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVLS 291

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR----------FRML 301
            AA+A AT S F                   +   VF+ +  + M            +ML
Sbjct: 292 LAANAVATKSMF-------------------HGLKVFNKQTHLNMLQDGNQVNKFFLKML 332

Query: 302 FETEE-SSVRRYM--GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
            E     +V  ++  G +TGI DLDP RW NS WR + V WD+    + Q RVS WEI+P
Sbjct: 333 PEIHNLQNVEVFLSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDP 392

Query: 359 LTTFP 363
             + P
Sbjct: 393 SVSLP 397


>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
          Length = 798

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 163/360 (45%), Positives = 214/360 (59%), Gaps = 60/360 (16%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C++ NV
Sbjct: 44  ELWHACAGPLVTVPRRDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCRVINV 102

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGF 142
            + A+V+TDEVYAQ+TL P   +++           P +   + FCKTLTASDTSTHGGF
Sbjct: 103 DLKAEVDTDEVYAQITLLPEPNQDENAVEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGF 162

Query: 143 SVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSA 202
           SV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSVFVS+
Sbjct: 163 SVLRRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQSGWSVFVSS 222

Query: 203 KRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSC 262
           KR                                            L+A  A        
Sbjct: 223 KR--------------------------------------------LVAGDA-------- 230

Query: 263 FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDL 322
              F   R SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 231 ---FIFLRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDS 286

Query: 323 DPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTS 382
           DP RW+ S WRS+KV WDE+++  R  RVS W+IEP       P+L P+ + RP  P ++
Sbjct: 287 DPTRWAKSKWRSLKVRWDETSSIPRPERVSPWKIEPALA---PPALSPVPMTRPKRPRSN 343



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+K G ++GRS+D+S+F +Y EL  EL  +F   G+   P +  W +V+ D END
Sbjct: 651 RSCTKVHKQGIALGRSVDLSKFQNYEELIAELDMLFEFNGELMAP-KKDWLIVYTDDEND 709

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW+ F   V  I I + E+V+ M
Sbjct: 710 MMLVGDDPWQEFCCMVRKIFIYTKEEVRNM 739


>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
          Length = 697

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 164/352 (46%), Positives = 211/352 (59%), Gaps = 26/352 (7%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +    +            +PP + C+
Sbjct: 28  CL--ELWHACAGPVGPLPRKGSAVVYLPQGHLEHIGDAGSAAA--------KVPPHVFCR 77

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-----------LGIPSKQPT--N 125
           + +V + AD  TDEVYAQ+TL  +  EE K      E                + P   +
Sbjct: 78  VVDVNLQADAATDEVYAQVTLA-VDNEESKRRVRDGENEEARDGDGEDADAMKRLPRIPH 136

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+SL  P+QEL+A+DLH  EW+FRHI+RG
Sbjct: 137 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFRHIYRG 196

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LG+RR  +   V P     +   
Sbjct: 197 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQLKNVSPFPAPHNQDP 256

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
               L   AHA A  S F V++NPR   SEF+IP  K++++V     S GMRF+M +E E
Sbjct: 257 GHSSLGNVAHALAVKSTFHVYYNPRLCQSEFIIPYWKFMRSVGQP-FSAGMRFKMRYENE 315

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           ++S RR  G I G  + DP  +  S W+ + V WD+   G R  RVS W+IE
Sbjct: 316 DASERRSTGIIIGSRESDPKSY-GSKWKCLVVRWDDDIEGRRPNRVSPWDIE 366


>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
          Length = 811

 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 149/226 (65%), Positives = 183/226 (80%), Gaps = 1/226 (0%)

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 1   ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWSVFV  K LV+GD+VLF+ +E  +L LGIRRA R  +V+PSSV+SS SMH+G+LAA
Sbjct: 61  TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           AA+A +T S F +F+NPRASP+EF+IP  KYVK+     +S+GMRF+M FETE+++ RRY
Sbjct: 121 AANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSCSQP-LSIGMRFKMRFETEDAAERRY 179

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
            G ITGI D+DP RW  S WRS+ VGWDE  A E+Q RVS WEIEP
Sbjct: 180 TGIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEP 225



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 63/89 (70%), Gaps = 2/89 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+K G +VGR++D+S+   Y+EL  EL ++F +EG   DP + GWQ+V+ D E+D
Sbjct: 670 RSCTKVHKQGNAVGRAVDLSKLDGYDELISELERLFNMEGLLNDPDK-GWQVVYTDSEDD 728

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
           ++L+GDDPW+ F + V  I I + E+++K
Sbjct: 729 MMLVGDDPWQEFCNIVCKILIYTHEELKK 757


>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
          Length = 657

 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 156/348 (44%), Positives = 219/348 (62%), Gaps = 27/348 (7%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGP+V+LP  G++VVY PQ H        +  V         LPP + C++ +V
Sbjct: 27  ELWHACAGPIVALPRRGSKVVYLPQAHLAAAGCGGDVAV--------ALPPHVACRVVDV 78

Query: 83  TMHADVETDEVYAQMTLQPLSP-----------EEQKDTFVPIELGIPSKQPT--NYFCK 129
            + AD  TDEVYA++ L                E + DT    E G   ++      FCK
Sbjct: 79  ELCADPSTDEVYARLALMAEGEVFERNMEGGRNEGEDDT----EDGDGERKSRMLQMFCK 134

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLTASDTSTHGGFSVPRRAAE  F  LD+    P+QEL+A+DLH  +W+FRHI+RGQP+R
Sbjct: 135 TLTASDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRR 194

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          SS+S  +  
Sbjct: 195 HLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFKAFSSNSSKMNA 254

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           L+A A++    S F + +NPR + SEF++P  K++K++ H    +GMRF++ + +E+ + 
Sbjct: 255 LSAVANSLKHRSVFHICYNPRDAASEFIVPYWKFLKSLNHP-FCIGMRFKIQYGSEDVNE 313

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           RR  G ITG++++DP+RW  S+WRS+ V W++ T    Q R+S WEIE
Sbjct: 314 RRS-GMITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIE 360


>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 645

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 162/326 (49%), Positives = 210/326 (64%), Gaps = 19/326 (5%)

Query: 42  VVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQP 101
           VVY PQGH + +        D+  P+   +PP + C++ +VT+HAD  TDEVYAQ++L P
Sbjct: 1   VVYLPQGHLDHLG-------DAPAPSPAAVPPHVFCRVVDVTLHADASTDEVYAQLSLLP 53

Query: 102 LSPE------EQKDTFVPIELGIPSKQP----TNYFCKTLTASDTSTHGGFSVPRRAAEK 151
            + E      E  +     E G   KQ      + FCKTLTASDTSTHGGFSVPRRAAE 
Sbjct: 54  ENEEVVRRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAED 113

Query: 152 VFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV 211
            FP LD+S Q P QEL+A+DLH  EWKFRHI+RGQP+RHLLTTGWS FV+ K+LV+GD+V
Sbjct: 114 CFPPLDYSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAV 173

Query: 212 LFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRA 271
           LF+  +  +L LG+RRA++         L S   ++G LA  AHA AT S F +F+NPR 
Sbjct: 174 LFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAHAVATKSMFQIFYNPRL 233

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSH 331
           S SEF++P  K+ K+ F    SVG RF+M +E+E+++ RRY G ITG  D DP+ W  S 
Sbjct: 234 SQSEFIVPYWKFTKS-FSQPFSVGSRFKMRYESEDAAERRYTGIITGTGDADPM-WRGSK 291

Query: 332 WRSVKVGWDESTAGERQPRVSLWEIE 357
           W+ + V WD+     R  RVS WEIE
Sbjct: 292 WKCLLVRWDDDGEFRRPNRVSPWEIE 317


>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
          Length = 1067

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 148/224 (66%), Positives = 175/224 (78%), Gaps = 12/224 (5%)

Query: 14  EGDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV------AATTNKEVDSHI 65
           EG+ K   +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQV      AA+  K+VD+H+
Sbjct: 33  EGERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHV 92

Query: 66  PNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-T 124
           P+YPNLP +LIC LH V +HAD +TDEVYAQMTLQP++    K+     EL +   +P  
Sbjct: 93  PSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVN-TYGKEALQLSELALKQARPQM 151

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
            +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARD+HD  W FRHI+R
Sbjct: 152 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYR 211

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIR 226
           GQPKRHLLTTGWS+FVS KRL AGDSV+ +    + NQ+ LG+R
Sbjct: 212 GQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRRHCDSNQISLGMR 255



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 691  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
            RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 934  RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 993

Query: 751  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 994  LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1026



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 107/211 (50%), Gaps = 29/211 (13%)

Query: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR 350
           ++S+GMRFRM+FETEE   RRYMGTITGISDLDP            VGWDES AGER+ R
Sbjct: 249 QISLGMRFRMMFETEELGTRRYMGTITGISDLDP------------VGWDESAAGERRNR 296

Query: 351 VSLWEIEPLTT-FPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT 409
           VS+WEIEP+   F + P  F   +KRP      S  +N  + A  + WL      +    
Sbjct: 297 VSIWEIEPVAAPFFLCPQPF-FGVKRPRQLDDESEMENLFKRA--MPWLGEEVCIKDTQN 353

Query: 410 LNFQS--LGMFPWMQ-QRVEPSFLGNDHNQQ--YQAMLAAGMQ---SGDPVRQQFMQLQQ 461
            N  +  L +  WM   R + S L N   Q    QA+    MQ   + +  RQ ++Q   
Sbjct: 354 QNSTAPGLSLVQWMNMNRQQSSSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQ--- 410

Query: 462 PFQYLQQSGSQ-NPLQLKQQQHLLQQLNSQA 491
               LQQ+  Q N  +L QQ   +  L+  A
Sbjct: 411 -NNLLQQNCIQFNSPKLPQQMQTMNDLSKAA 440


>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
 gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
          Length = 680

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/344 (43%), Positives = 215/344 (62%), Gaps = 14/344 (4%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAG  V+LP  G+ VVY PQ H   +AA          P  P +PP ++C++ +V
Sbjct: 20  ELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGGLAPAPPRVPPHVVCRVVDV 76

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDT---------FVPIELGIPSKQPTNYFCKTLTA 133
            + AD  TDEVYA++ L  +     ++              +     K  ++ FCKTLTA
Sbjct: 77  ELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTA 136

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FRHI+RGQP+RHLLT
Sbjct: 137 SDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLT 196

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS F++ K+LV+GD+VLF+     +L LG+RRA++         ++     + +L+A 
Sbjct: 197 TGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAV 256

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++ R + 
Sbjct: 257 ANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSL-NYHFSVGTRFKVGCENEDANERSF- 314

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 315 GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 358


>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/347 (45%), Positives = 221/347 (63%), Gaps = 21/347 (6%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPNLPPQLICQLHN 81
           ELWHACAGP V+LP  G+ VVY PQ H   +AA      D+  P    ++PP + C++  
Sbjct: 21  ELWHACAGPGVALPRRGSAVVYLPQAH---LAAGGG---DAPAPAGRAHVPPHVACRVVG 74

Query: 82  VTMHADVETDEVYAQMTL-----------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           V + AD  TDEVYA++ L           +    EE +D     +     + P + FCKT
Sbjct: 75  VELCADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMAAGDGENKPRMP-HMFCKT 133

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSVPRRAAE  F  LD+    P+QEL+A+DLH  +W+FRHI+RGQP+RH
Sbjct: 134 LTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLHGTQWRFRHIYRGQPRRH 193

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA++         ++++   +  L
Sbjct: 194 LLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRNEALFEAVNTNDSKLHTL 253

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
           +A A +    S F V F+PR+  SEF++P  ++ K++ HT  S+GMRF++  E+++++  
Sbjct: 254 SAVASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHT-FSIGMRFKVSNESDDAN-E 311

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           R  G I+GIS++DP+RW  S WR + V WD+ST    Q RVS WEIE
Sbjct: 312 RSTGLISGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPWEIE 358


>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
 gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
          Length = 680

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 14/345 (4%)

Query: 22  SELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHN 81
           +ELWHACAG  V+LP  G+ VVY PQ H   +AA          P  P +PP ++C++ +
Sbjct: 19  AELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGVSAPAPPRVPPHVVCRVVD 75

Query: 82  VTMHADVETDEVYAQMTLQPLSPEEQKDT---------FVPIELGIPSKQPTNYFCKTLT 132
           V + AD  TDEVYA++ L  +     ++              +     K  ++ FCKTLT
Sbjct: 76  VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FRHI+RGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS F++ K+LV+GD+VLF+     +L LG+RRA++         ++     + +L+A
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSA 255

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++ R +
Sbjct: 256 VANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNY-HFSVGTRFKVGCENEDANERSF 314

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 315 -GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 358


>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
          Length = 676

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 161/344 (46%), Positives = 223/344 (64%), Gaps = 16/344 (4%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGP VSLP  G+ +VY PQGH         +   +     P +PP + C++ +V
Sbjct: 26  ELWHACAGPGVSLPRQGSALVYLPQGHLASGGGGGGEVAGA----APPVPPHVACRVLDV 81

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTF------VPIELGIPSKQPT--NYFCKTLTAS 134
            + AD  TDEVYA++ L  +    +++          +E G   K+P   + FCKTLTAS
Sbjct: 82  ELCADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKPRMPHMFCKTLTAS 141

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH  +W+FRHI+RGQP+RHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPRRHLLTT 201

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTV-MPSSVLSSDSMHIGLLAAA 253
           GWS FV+ K+LV+GD+VLF+     +L LGIRRA++     +  +V SSDS     L+A 
Sbjct: 202 GWSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNSSDSRQR-TLSAV 260

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A +    S F V F+PR+  SEF++P  K+ K++ H  +S+GMRF++ +E+E+++  R  
Sbjct: 261 ASSFRNRSTFHVCFDPRSGASEFIVPYWKFSKSLNHP-LSIGMRFKLSYESEDAN-ERST 318

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           G I+G+S++DP+RW  S WR + V WD +T    Q R+S WEIE
Sbjct: 319 GMISGVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIE 362


>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
          Length = 680

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 14/345 (4%)

Query: 22  SELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHN 81
           +ELWHACAG  V+LP  G+ VVY PQ H   +AA          P  P +PP ++C++ +
Sbjct: 19  AELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGMSAPAPPRVPPHVVCRVVD 75

Query: 82  VTMHADVETDEVYAQMTLQPLSPEEQKDT---------FVPIELGIPSKQPTNYFCKTLT 132
           V + AD  TDEVYA++ L  +     ++              +     K  ++ FCKTLT
Sbjct: 76  VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FRHI+RGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS F++ K+LV+GD+VLF+     +L LG+RRA++         ++     + +L+A
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSA 255

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++ R +
Sbjct: 256 VANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYP-FSVGTRFKVGCENEDANERSF 314

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 315 -GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 358


>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
          Length = 680

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 14/345 (4%)

Query: 22  SELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHN 81
           +ELWHACAG  V+LP  G+ VVY PQ H   +AA          P  P +PP ++C++ +
Sbjct: 19  AELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGMSAPAPPRVPPHVVCRVVD 75

Query: 82  VTMHADVETDEVYAQMTLQPLSPEEQKDT---------FVPIELGIPSKQPTNYFCKTLT 132
           V + AD  TDEVYA++ L  +     ++              +     K  ++ FCKTLT
Sbjct: 76  VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FRHI+RGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS F++ K+LV+GD+VLF+     +L LG+RRA++         ++     + +L+A
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSA 255

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++ R +
Sbjct: 256 VANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYP-FSVGTRFKVGCENEDANERSF 314

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 315 -GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 358


>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
 gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
          Length = 331

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 146/293 (49%), Positives = 210/293 (71%), Gaps = 3/293 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L +ELW+ACAGPLV +P VG +V YFPQGH EQVAA  N++  + +P Y +LP +++C++
Sbjct: 1   LYTELWYACAGPLVYVPRVGDKVFYFPQGHLEQVAAFLNEDSKTAMPIY-DLPYKILCKV 59

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASDTST 138
            +V + A+ +TDEV+A +TL P++  ++  +    E L +  K     F K LT SDTST
Sbjct: 60  VHVQLKAEAKTDEVFAHITLLPVAEGDELSSNKDGESLLLHRKTRVLSFTKKLTPSDTST 119

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
            GGFSVP+R AE+  P LD S QPPAQEL+A+DLH  EW+FRHI+RGQPKRHLLT GWS 
Sbjct: 120 QGGFSVPKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRHLLTGGWST 179

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           F+S+KR+VAGDS +F+  E  +L +G+RRA++    + ++V+++ SM +G+L++A+HA +
Sbjct: 180 FISSKRVVAGDSFIFLRGESGELRVGVRRAMKLENNLSANVVTAHSMQLGILSSASHAIS 239

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           T S FT+FF+P  SP+EF+IP  +Y+K+      S+G RF M FE EE + +R
Sbjct: 240 TGSIFTIFFHPWTSPAEFIIPFDQYMKSA-EIEYSIGTRFIMQFEGEECTEQR 291


>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 648

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 151/345 (43%), Positives = 218/345 (63%), Gaps = 21/345 (6%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LWHACAGP+V+LP  G+ +VY PQ H        +  V         LPP + C++ +V
Sbjct: 23  DLWHACAGPVVALPRRGSALVYLPQAHLAAAGGGGDAPV--------GLPPHVACRVVDV 74

Query: 83  TMHADVETDEVYAQMTLQPLSPE----------EQKDTFVPIELGIPSKQPTNYFCKTLT 132
            + AD  TDEVYA++ L                E +D    ++ G    +  + FCKTLT
Sbjct: 75  ELCADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDMEDVD-GERKSRMLHMFCKTLT 133

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QEL+A+DLH  +W+FRHI+RGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHLL 193

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           TTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +S+S  I  L+A
Sbjct: 194 TTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHTLSA 253

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
             ++    S F + +NPRA+ SEF++P  K++K++ +    +GMRF++ + +E+ + RR 
Sbjct: 254 VVNSLKHRSVFHICYNPRAAASEFIVPYWKFLKSL-NRPFCIGMRFKIQYGSEDVNERRS 312

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            G ITGI+++DP+RW+ S W+S+ V W++      Q R+S WEIE
Sbjct: 313 -GMITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIE 356


>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 151/347 (43%), Positives = 206/347 (59%), Gaps = 8/347 (2%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLN +LWHACAG +V +P V ++V YFPQGH+E   A+ +        NYP +P  + C
Sbjct: 16  KCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVD------FRNYPRIPAYIPC 69

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           ++  +   AD E+DEVYA++TL PL+  E          G  S++    F KTLT SD +
Sbjct: 70  RVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASFAKTLTQSDAN 129

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
             GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGWS
Sbjct: 130 NGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 189

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
            FV+ K+L+AGDS++F+  E   L +GIRRA R       S      +    +  A   A
Sbjct: 190 TFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCSNGSFFGRVKVTAEAVIEAVRLA 249

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTI 316
                F V + PRAS  EF +  +  VK+    R   GMRF+M FETE+SS +  +MGTI
Sbjct: 250 VNGQPFEVIYYPRASTPEFCVK-SSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTI 308

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           + +   DPVRW +S WR ++V WDE    +   RVS W +E ++  P
Sbjct: 309 SSVQVADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP 355



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S  +SY+EL  +L +MF IE   +  +R+   +++ D    V  
Sbjct: 494 CKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE---DSEMRN--HVLYRDATGAVKH 548

Query: 753 LGDDPWEAFVSNVWYIKIL 771
           +GD+P+  F      + IL
Sbjct: 549 IGDEPFSDFTKTAKRLTIL 567


>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
 gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
          Length = 702

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 169/411 (41%), Positives = 229/411 (55%), Gaps = 57/411 (13%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCL+S+LWHACAG +V +P V T+V YFPQGH+E  + + +        N+P LPP ++C
Sbjct: 18  KCLDSQLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGSVD------FRNFPRLPPYILC 71

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           ++  +   AD ETDEVYA++ L P+  +E   + +    I  G   +     F KTLT S
Sbjct: 72  RVSGIKFMADPETDEVYAKIKLTPICSKENGMEDEEEGVINGGEGQENKPASFAKTLTQS 131

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 132 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTT 191

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----PPT---------VMP---- 236
           GWS FV+ K+LVAGDS++F+  E   L +GIRRA R     P +         VMP    
Sbjct: 192 GWSTFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGGNCVMPYGGF 251

Query: 237 SSVLSSDSMHI-----------------GLLAA-----AAHAAATNSCFTVFFNPRASPS 274
           +S    D   +                 G + A     AA  AA    F V + PRAS  
Sbjct: 252 NSFFREDGNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVVYYPRASTP 311

Query: 275 EFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 333
           EF +  +  VKA F  R   GMRF+M FETE+SS +  +MGTI  +   DP+RW +S WR
Sbjct: 312 EFCVKAS-MVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPLRWPDSPWR 370

Query: 334 SVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 379
            ++V WDE    +   RVS W +E ++  P+   L P      +L+ P HP
Sbjct: 371 LLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFSPPRKKLRMPQHP 420



 Score = 42.7 bits (99), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY+EL  +L  MFGIE        +   +++ D    V  
Sbjct: 619 CKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIENS-----ETLNNVLYRDIAGIVKH 673

Query: 753 LGDDPWEAFVSNVWYIKIL 771
           +GD+P+  F+     + I+
Sbjct: 674 IGDEPFSDFMKTARRLTII 692


>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
          Length = 552

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/351 (44%), Positives = 208/351 (59%), Gaps = 61/351 (17%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ A   +  +         LPP + C+
Sbjct: 49  CL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQQAPGFSAAI-------YGLPPHVFCR 99

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELG--------IPSKQPTNYF 127
           + +V +HA+ +TDEVYAQ++L P S + ++   +  + +  G        +      + F
Sbjct: 100 ILDVKLHAETDTDEVYAQVSLLPESEDIERKLREGVIDVVDGGDQEDYEVVKRSNTPHMF 159

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
           CKTLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RGQP
Sbjct: 160 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLEWRFRHIYRGQP 219

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 247
           +RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + + + 
Sbjct: 220 RRHLLTTGWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGASAFSAQYNQNTNH 279

Query: 248 GLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES 307
              +  AHA +TNS F +++NP++                                    
Sbjct: 280 NNFSEVAHAISTNSAFNIYYNPKS------------------------------------ 303

Query: 308 SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
                +G ITGISDLDP+RW  S WR + V WD++ A   Q RVS WEIEP
Sbjct: 304 -----LGIITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIEP 349


>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
          Length = 285

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 141/252 (55%), Positives = 188/252 (74%), Gaps = 3/252 (1%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN-KEVDSHIPNYPNLPPQLICQ 78
           L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+ + +++D ++P + +LPP+++C+
Sbjct: 19  LYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMF-DLPPKILCR 77

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + NV + A+ ++DEVYAQ+ LQP   ++ + T +  E     K   + FCKTLTASDTST
Sbjct: 78  VVNVELRAEADSDEVYAQIMLQP-EADQNELTSLDAEPQEREKCTAHSFCKTLTASDTST 136

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQPKRHLLTTGWSV
Sbjct: 137 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSV 196

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           FVS+KRLV+GD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 197 FVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAIS 256

Query: 259 TNSCFTVFFNPR 270
           T + F+VF+ PR
Sbjct: 257 TGTLFSVFYKPR 268


>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
          Length = 687

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 156/345 (45%), Positives = 215/345 (62%), Gaps = 16/345 (4%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGP V+LP  G+ +VY PQ H     A      +        +PP + C++  V
Sbjct: 23  ELWHACAGPGVALPRRGSALVYLPQAH----LAADGGGGEVPPAGAAAVPPHVACRVVGV 78

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKD--------TFVPIELGIPSKQPT--NYFCKTLT 132
            + AD  TDEVYA++ L       Q++            +E     K+P   + FCKTLT
Sbjct: 79  ELRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLT 138

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA DLH  +WKFRHI+RGQP+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLL 198

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
           T GWS FV+ K+LV+GD+VLF+  +  QL LG+RRA++         ++S    + +L++
Sbjct: 199 TIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSS 258

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
            A +    S F + FNPR+  SEF++P  + +K++ H   S+GMRFR+ +E+E+++  R 
Sbjct: 259 VASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHP-FSIGMRFRVCYESEDAN-ERS 316

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            G I+GIS++DP+RW  S W+ + V WD+ST    Q RVS WEIE
Sbjct: 317 AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIE 361


>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
          Length = 662

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 146/317 (46%), Positives = 212/317 (66%), Gaps = 13/317 (4%)

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCK 129
           +P +++C++ NV + A+ ETDEV+AQ+TLQP  P+++    +P        +P  + FCK
Sbjct: 29  VPYKILCKVVNVELKAETETDEVFAQITLQP-DPDQENLPTLPDPPLPEQPRPVVHSFCK 87

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
            LT SDTSTHGGFSV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+R
Sbjct: 88  ILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRR 147

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
           HLLTTGWS FV++K+L++GD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+
Sbjct: 148 HLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGV 207

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
           LA+A+HA  TNS F V++ PR S S++++ + KY+ A      +VGMRF+M FE E+  V
Sbjct: 208 LASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYL-AASKVGFNVGMRFKMSFEGEDVPV 266

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE------PLTTFP 363
           +++ GTI G  DL  ++WS S W+S+KV WDE T      RVS WEIE      P    P
Sbjct: 267 KKFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVP 325

Query: 364 MYPSLFPLRLKRPWHPS 380
           +  +    + KRP  PS
Sbjct: 326 LQSA---TKNKRPREPS 339



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           RT +KV   G +VGR++D++    Y +L  EL +MF I+      L+  W++ F D E D
Sbjct: 558 RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKD-----LKQKWKVAFTDDEGD 612

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            + +GDDPW  F   V  I +   ED +K+
Sbjct: 613 TMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 642


>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
          Length = 620

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/367 (41%), Positives = 221/367 (60%), Gaps = 17/367 (4%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G    +  +LW  CAGPL  +P +G  V YFPQG+ E V A+T +E++   P   +LP 
Sbjct: 30  DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPS 88

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE+YA++TL P     + P + ++ F P+          N F 
Sbjct: 89  KLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRPL---------VNSFT 139

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS +GGFSVP++ A +  P LD S   PAQE++A DLHD +W+FRH +RG P+
Sbjct: 140 KVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQ 199

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RH LTTGW+ F+++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G
Sbjct: 200 RHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 259

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           ++A+A HA      F V + P    S+F++   K++ AV + + +VG RF M FE ++ S
Sbjct: 260 VIASAKHAFDNQCIFIVVYKPSIRSSQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFS 318

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            RRY GTI G+SD  P  W  S WRS++V WDE  +  R  +VS WEIE L      P  
Sbjct: 319 ERRYFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRS 377

Query: 369 FPLRLKR 375
             L+ KR
Sbjct: 378 SLLKNKR 384



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 3/96 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q + +RT  KV   G ++GR++D+S  + Y++L  EL ++F I+G+ +   R+ W++
Sbjct: 517 QSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKI 574

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 777
            F D +   +L+GDDPW  F   V  I I S E+V+
Sbjct: 575 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 610


>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
 gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
          Length = 688

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 155/344 (45%), Positives = 210/344 (61%), Gaps = 20/344 (5%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGP+V+LP  G+ VVY PQGH    A   N  VD        LPP + C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHL-AAAGGGNVAVD--------LPPHVACRVADV 74

Query: 83  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSK-QPTNYFCKTLTA 133
            + AD  TDEVYA++ L        + L            +  +  K +  + FCKTLTA
Sbjct: 75  ELCADAATDEVYARLALVAEGEAFGRNLRGGGVDGDDDMEDFDVERKSRMLHMFCKTLTA 134

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          S DS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFDDFSCDSTKRHTLLAV 254

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A +    S F + +NPRA+ SE++IP  K++K++ +    +G R  +    E+ S RR  
Sbjct: 255 ADSLKHKSVFHISYNPRATASEYIIPHHKFLKSL-NLPFCIGARINLQCHNEDVSERR-S 312

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           G +  +S++DP++W  S WRS+ V W++      Q RVS WEIE
Sbjct: 313 GMVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIE 356


>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
 gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
 gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
          Length = 606

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 153/367 (41%), Positives = 223/367 (60%), Gaps = 19/367 (5%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G    +  +LW  CAGPL  +P +G  V YFPQG+ E V A+T +E++   P   +LP 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPS 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE+YA++TL P     + P + ++ F P+          N F 
Sbjct: 77  KLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRPL---------VNSFT 127

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS +GGFSVP++ A +  P LD S   PAQE++A DLHD +W+FRH +RG P+
Sbjct: 128 KVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQ 187

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RH LTTGW+ F+++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G
Sbjct: 188 RHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 247

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           ++A+A HA      F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S
Sbjct: 248 VIASAKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFS 304

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            RRY GTI G+SD  P  W  S WRS++V WDE  +  R  +VS WEIE L      P  
Sbjct: 305 ERRYFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRS 363

Query: 369 FPLRLKR 375
             L+ KR
Sbjct: 364 SLLKNKR 370



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 3/96 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q + +RT  KV   G ++GR++D+S  + Y++L  EL ++F I+G+ +   R+ W++
Sbjct: 503 QSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKI 560

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 777
            F D +   +L+GDDPW  F   V  I I S E+V+
Sbjct: 561 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596


>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
          Length = 775

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 145/250 (58%), Positives = 185/250 (74%), Gaps = 1/250 (0%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           FCKTLTASDTSTHGGFSV RR A++  P LD + QPPAQEL+A+DLH V W FRHIFRGQ
Sbjct: 18  FCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVGWHFRHIFRGQ 77

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 246
           P+RHLLTTGWSVFVS+KRL+AGD+ +F+  +  +L +G+RRA+R    + SSV+SS SMH
Sbjct: 78  PRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVSSSVISSHSMH 137

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
           +G++A A+HA +T++ FTV++ PR SPS F+IP  KY++A+ +   SVGMRF+M FE EE
Sbjct: 138 LGVVATASHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAM-NNNFSVGMRFKMRFEGEE 196

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 366
           +  +R++GTI G  D DPVRW  S WRS+KV WDE +   R  RVS WEIE + T     
Sbjct: 197 APEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIELIATAAALS 256

Query: 367 SLFPLRLKRP 376
            L   R KRP
Sbjct: 257 PLPVSRNKRP 266



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 10/98 (10%)

Query: 691 RTFVKVYKSGSV-GRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV K GS  GR++D+ +F  Y E   EL QMF IEG+ EDP R GW +V+ D E D
Sbjct: 638 RSHTKVQKQGSAFGRAVDLMKFEGYPEFIHELEQMFNIEGELEDP-RKGWLVVYTDNEGD 696

Query: 750 VLLLGDDPWEAFVSNV--------WYIKILSPEDVQKM 779
           ++L+GD PW+ F+  +          I I + E+V+KM
Sbjct: 697 MMLVGDHPWQEFLHPINREFCRIAHKIYIYTREEVEKM 734


>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
          Length = 686

 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 207/344 (60%), Gaps = 20/344 (5%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGP+V+LP  G+ VVY PQGH                    +LPP ++C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA---------DLPPHVVCRVADV 74

Query: 83  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 133
            + AD  TDEV A++ L        + L     +      +     K    + FCKTLTA
Sbjct: 75  ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +SDS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A +    S F + +NPRA+ SE++IP  K++K++ H  V +G R       E+ S RR  
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHP-VCIGARINFQCHNEDVSERRS- 312

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           G +  IS++DP++W  S WRS+ V W++      Q RVS WEIE
Sbjct: 313 GVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356


>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 683

 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 207/344 (60%), Gaps = 20/344 (5%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGP+V+LP  G+ VVY PQGH                    +LPP ++C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA---------DLPPHVVCRVADV 74

Query: 83  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 133
            + AD  TDEV A++ L        + L     +      +     K    + FCKTLTA
Sbjct: 75  ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +SDS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A +    S F + +NPRA+ SE++IP  K++K++ H  V +G R       E+ S RR  
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHP-VCIGARINFQCHNEDVSERRS- 312

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           G +  IS++DP++W  S WRS+ V W++      Q RVS WEIE
Sbjct: 313 GVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356


>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
          Length = 273

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 148/210 (70%), Positives = 156/210 (74%), Gaps = 36/210 (17%)

Query: 1   MKLSTSGLCQQ-GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           MKLSTSGL QQ GHEG+ KCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQ       
Sbjct: 1   MKLSTSGLGQQQGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQ------- 53

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP 119
                                     ADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIP
Sbjct: 54  --------------------------ADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIP 87

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKF
Sbjct: 88  SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 147

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGD 209
           RHIFRG  +   L   W V   + R V  D
Sbjct: 148 RHIFRG--RDSYLEQSWPVITLSGRRVGRD 175


>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
 gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
 gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
 gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
 gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
          Length = 593

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/367 (41%), Positives = 221/367 (60%), Gaps = 19/367 (5%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G    +  +LW  CAGPL  +P +G +V YFPQGH E V  +T +E++   P   +LP 
Sbjct: 18  DGSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPS 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F 
Sbjct: 77  KLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPL---------VNSFT 127

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS HGGF VP++ A +  PSLD S   PAQEL+A DLH  +W+F H +RG P+
Sbjct: 128 KVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQ 187

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGW+ F ++K+LVAGD ++F+  E  +L +GIRRA      +PSS++S D M  G
Sbjct: 188 RHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 247

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           ++A+A HA      FTV + PR+  S+F++   K++ AV + + +VG RF M  E ++ S
Sbjct: 248 VVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFS 304

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            RR  GTI G+SD  P  W  S WRS++V WDE T+     +VS W+IE L      P  
Sbjct: 305 ERRCFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAINVPRS 363

Query: 369 FPLRLKR 375
           F L+ KR
Sbjct: 364 FLLKNKR 370



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 17/169 (10%)

Query: 604 SYNGKDAAVGTENCNTDS-QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 662
           +YN +      EN  T +  N  +FGV +D+     P  +      +   +S +  G   
Sbjct: 436 NYNNQMVTEMEENITTKTGTNFRLFGVTLDT-----PPVIKDPIEEIGSEISKLTEGKKF 490

Query: 663 FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREEL 721
               +   ++  +E+     Q  Q + +RT  KV   G ++GR++D+S  + Y++L  EL
Sbjct: 491 ---GLSQTLRSPTEI-----QNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILEL 542

Query: 722 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 770
            ++F I+G+ +   R+ W++ F D + D +L+GDDPW  F + V  I I
Sbjct: 543 EKLFDIKGQLQT--RNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589


>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
 gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
          Length = 779

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/401 (40%), Positives = 228/401 (56%), Gaps = 56/401 (13%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
            K L+S+LWHACAG +V LP VG +V+YFPQGH EQ AA         IP++P     ++
Sbjct: 19  KKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTIL 69

Query: 77  CQLHNVTMHADVETDEVYAQMTLQP-LSP---------EEQKDTFVPIELGIPSKQPTNY 126
           C++ +V   AD ETDEVYA+M LQP ++P         ++++    P  +  P+      
Sbjct: 70  CRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKPAS----- 124

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 125 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGT 184

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV------- 239
           P+RHLLTTGWS FV+ K+LVAGD+++F+ +   +L +G+RR++R P    S +       
Sbjct: 185 PRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPG 244

Query: 240 -------LSSDSMHIGLLAAAAHAAATNS--------------CFTVFFNPRASPSEFVI 278
                  LS +       + A + A   S               F V + PRAS +EF +
Sbjct: 245 QSGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVYYPRASTAEFCV 304

Query: 279 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 337
                VKA        GMRF+M FETE+SS +  +MGTI+ +   DP+RW +S WR ++V
Sbjct: 305 -RASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRWPSSPWRILQV 363

Query: 338 GWDESTAGERQPRVSLWEIEPLTTFPMY--PSLFPLRLKRP 376
            WDE    +   RVS W++E ++T PM   P   P +  RP
Sbjct: 364 SWDEPDLLQGVNRVSPWQVELVSTLPMQLPPFSLPRKKIRP 404


>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 597

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 152/359 (42%), Positives = 220/359 (61%), Gaps = 23/359 (6%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + +  +LW  CAGPL  +P +G +V YFPQGH E + A T +E++   P + +LP +L C
Sbjct: 23  RYMYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELIEAYTREELNKIQPIF-DLPSKLQC 81

Query: 78  QLHNVTMHADVETDEVYAQMTLQP----LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 133
           ++  + +  +  +DE YA++TL P    + P +  + + P+          N F K LTA
Sbjct: 82  RVIAIQLKVEKNSDETYAEITLMPDTQVVIPTQNDNHYRPL---------VNSFTKVLTA 132

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTS HGGFSVPR+ A +  P LD S   PAQEL+  DLH  +W+F+H +RG P+RHLLT
Sbjct: 133 SDTSVHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLT 192

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           +GW+ F ++K+LVAGD ++F+  E  +L +GIRRA      + SS++S DSM  G++A+A
Sbjct: 193 SGWNAFTTSKKLVAGDVIVFLRGETGELRVGIRRAGHQQKNIHSSLISIDSMRHGVIASA 252

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
            HA      F V + PR+  S+F++   K+V AV + + +VG RF M FE E+ S RRY 
Sbjct: 253 VHAFNNQCMFIVVYKPRS--SQFIVSYNKFVDAV-NNKFNVGSRFTMRFEGEDFSERRYS 309

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 372
           GTI G+++     W  S WRS++V WDE  +  R  +VS W+IE LT     PSL  LR
Sbjct: 310 GTIIGVNNFSS-HWMESEWRSLEVKWDEFASFPRPDKVSPWDIEHLT-----PSLNVLR 362



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 683 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q + TR+  KV   G  VGR+LD++  + Y+ L  EL ++F + G+ +   R+ W++
Sbjct: 508 QSKQFSSTRSCTKVQMQGVPVGRALDLNVLNGYDHLIIELEKLFDLNGQLQT--RNQWKI 565

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKI 770
            F D E +  L+GD+PW  F S V  I I
Sbjct: 566 AFKDNEGNEKLVGDNPWPEFCSMVKKIFI 594


>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 393

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 207/344 (60%), Gaps = 20/344 (5%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGP+V+LP  G+ VVY PQGH                    +LPP ++C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA---------DLPPHVVCRVADV 74

Query: 83  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 133
            + AD  TDEV A++ L        + L     +      +     K    + FCKTLTA
Sbjct: 75  ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +SDS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A +    S F + +NPRA+ SE++IP  K++K++ H  V +G R       E+ S RR  
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHP-VCIGARINFQCHNEDVSERRS- 312

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           G +  IS++DP++W  S WRS+ V W++      Q RVS WEIE
Sbjct: 313 GVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356


>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
          Length = 668

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 153/340 (45%), Positives = 211/340 (62%), Gaps = 13/340 (3%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LWHACAGP+VSLP  G+ VVY PQGH     A      +  +     LPP + C++ +V
Sbjct: 25  DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVA----LPPHVACRVVDV 80

Query: 83  TMHAD-----VETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
            +        V    +Y + TL       +++  +         +  + FCKTLTASDTS
Sbjct: 81  ELCVSEPLSLVVGFSLYLRGTLH--GGGIEREDDMEDGDEERKSRMLHMFCKTLTASDTS 138

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           THGGFSVPRRAAE  FP LD     P+QEL+A+DLH  +W+FRHI+RGQP+RHLLTTGWS
Sbjct: 139 THGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWS 198

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
            FV+ K+LV+GD+VLF+  +  +L LG+RRA +          SS+S  +  L+A A + 
Sbjct: 199 SFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSL 258

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
              S F + +NPRA+ SE+V+P  K+VK+  H  V +GMRF+  FE+E+ + RR  G I 
Sbjct: 259 KHGSVFHICYNPRATASEYVVPYWKFVKSFNHP-VCIGMRFKFHFESEDVNERR-SGMIA 316

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           G+S++DP+RW  S WRS+ V W+++T    Q RVS WEIE
Sbjct: 317 GVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE 356


>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
 gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
          Length = 755

 Score =  285 bits (728), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 189/534 (35%), Positives = 276/534 (51%), Gaps = 92/534 (17%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L+ +LWHACAG +V +P+V T+V YFPQGH+E   A +N +          +PP ++C
Sbjct: 62  KSLDPQLWHACAGGMVQMPSVNTKVFYFPQGHAEH--AQSNVDFGDSF----RIPPLILC 115

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           ++ +V   AD ETDEV++++TL PL   E ++     +    S++P + F KTLT SD +
Sbjct: 116 RVASVKFLADSETDEVFSKITLIPLRNSELENDDSDGDGSENSEKPAS-FAKTLTQSDAN 174

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
             GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+RHLLTTGWS
Sbjct: 175 NGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWS 234

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT--VMPSSVLSSDSMHIGL------ 249
            FV+ K+LVAGDS++F+  E  +L +GIRRA R     +   S  SS + + GL      
Sbjct: 235 SFVNQKKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPYGGA 294

Query: 250 -----------------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPL 280
                                        +  A   AA+N  F V + PRAS  EF I  
Sbjct: 295 FTAFLREENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYYPRASTPEFCIK- 353

Query: 281 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 339
           T  VKA    +   GMRF+M FETE+SS +  +MGTI+ +  +DP+RW NS WR ++V W
Sbjct: 354 TSAVKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTW 413

Query: 340 DESTAGERQPRVSLWEIEPLTT-----------------FPMYPSLFPLRLKR------- 375
           DE        RVS W +E ++                  FP +P  FPL + +       
Sbjct: 414 DEPDLLHNVKRVSPWLVELVSNMSMIHLAPFSPPRKKLRFPQHPD-FPLDVVQFQIPTFS 472

Query: 376 --PWHP-STSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQS----LGMFPWMQQRV-EP 427
             P++P    S +DN +  A+G+   R       L+ L+  +    LG+FP  ++ +   
Sbjct: 473 GNPFNPLCCLSSSDNYNAPAAGIQGARHAQIGISLSDLHLNNNKFQLGVFPNNRETISNV 532

Query: 428 SFLGNDHNQQYQAMLAAGMQSGDP-------------VRQQFMQLQQPFQYLQQ 468
           S +  +H+ + +  ++  +  G+               R QF+   QP    QQ
Sbjct: 533 SNITTNHDNKSKESISCLLTIGNSHKRSLEIKSDNNDNRHQFLLFGQPILTEQQ 586


>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
 gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
          Length = 835

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 162/416 (38%), Positives = 230/416 (55%), Gaps = 71/416 (17%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
            K L+S+LWHACAG +V LP VG +V+YFPQGH EQ AA         IP++P     ++
Sbjct: 60  KKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTIL 110

Query: 77  CQLHNVTMHADVETDEVYAQMTLQP-LSP---------EEQKDTFVPIELGIPSKQPTNY 126
           C++ +V   AD ETDEVYA+M LQP ++P         ++++    P  +  P+      
Sbjct: 111 CRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKPAS----- 165

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 166 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGT 225

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV------- 239
           P+RHLLTTGWS FV+ K+LVAGD+++F+ +   +L +G+RR++R P    S +       
Sbjct: 226 PRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPG 285

Query: 240 ------------LSSDSMHIGLLAAAAHAAATNS------------------------CF 263
                       + S+S +  LL+      +  S                         F
Sbjct: 286 QRSLPQNSSRWEIKSESGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAF 345

Query: 264 TVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDL 322
            V + PRAS +EF +     VKA        GMRF+M FETE+SS +  +MGTI+ +   
Sbjct: 346 EVVYYPRASTAEFCV-RASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPA 404

Query: 323 DPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY--PSLFPLRLKRP 376
           DP+RW +S WR ++V WDE    +   RVS W++E ++T PM   P   P +  RP
Sbjct: 405 DPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVELVSTLPMQLPPFSLPRKKIRP 460


>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 688

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 169/412 (41%), Positives = 226/412 (54%), Gaps = 55/412 (13%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCL+S LWHACAG +V +P V  +V YFPQGH+E      +  V      YP +PP + C
Sbjct: 12  KCLDSRLWHACAGGMVQMPVVNAKVFYFPQGHAEHACGPVDFRV------YPKIPPFIQC 65

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ++  +   AD ETDEVY ++ L PL+  E   +D  V    G  +K  +  F KTLT SD
Sbjct: 66  KVGAIKYMADPETDEVYVKLRLVPLTRNEGDFEDDAVGGINGSENKDKSPSFAKTLTQSD 125

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
            +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTG
Sbjct: 126 ANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTG 185

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA---------------------IRPPTV 234
           WS FV+ K+LVAGDS++F+  EK+ L +GIRRA                     IRP   
Sbjct: 186 WSSFVNHKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAPAGWNSGGGIRP--- 242

Query: 235 MPSSVLS-------SDSMHIGL------------LAAAAHAAATNSCFTVFFNPRASPSE 275
           MP    S       S  +  GL            +  AA  AA    F V + PRAS  E
Sbjct: 243 MPYGGFSAFLREEDSQLLRNGLSPNAKGKVRPEAVIEAATLAANMQPFEVVYYPRASAPE 302

Query: 276 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 334
           F +     V+A    R   GMRF+M FETE+SS +  +MGTI+ ++  DP RW NS WR 
Sbjct: 303 FCVK-ANLVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFADP-RWPNSPWRL 360

Query: 335 VKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSFN 385
           ++V WDE    +   RVS W +E ++  P ++ S +  + K+P  P    F+
Sbjct: 361 LQVTWDEPELLQNVKRVSPWLVEIVSNMPTIHLSHYSTQQKKPRFPQHPDFS 412


>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
 gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
 gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
          Length = 605

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 146/352 (41%), Positives = 214/352 (60%), Gaps = 19/352 (5%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G    +  +LW  CAGPL  +P +G +V YFPQGH E V A+T +E++   P   + P 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQP-ICDFPS 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F 
Sbjct: 77  KLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRPL---------VNSFT 127

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS HGGFSVP++ A +  P LD S   P QE++A DLH  +W+FRHI+RG  +
Sbjct: 128 KVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQ 187

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLT GW+ F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S +SM  G
Sbjct: 188 RHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHG 247

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           ++A+A HA      F V + PR+  S+F++   K++  V + + +VG RF M FE ++ S
Sbjct: 248 IIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFS 304

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
            RR  GTI G+SD  P  W  S WRS++V WDE  +  R  +VS W+IE LT
Sbjct: 305 ERRSFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLT 355



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 61/98 (62%), Gaps = 3/98 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q + TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 502 QSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--ARNQWEI 559

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
            F + E D +L+G+DPW  F + V  I I S E+V+ +
Sbjct: 560 AFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597


>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 214/390 (54%), Gaps = 51/390 (13%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCLN +LWHACAG +V +P V ++V YFPQGH+E   A+ +        NYP +P  + C
Sbjct: 16  KCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVD------FRNYPRIPAYIPC 69

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
           ++  +   AD E+DEVYA++TL PL+  E          G  S++    F KTLT SD +
Sbjct: 70  RVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASFAKTLTQSDAN 129

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
             GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGWS
Sbjct: 130 NGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 189

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----PPT-----------VMP----S 237
            FV+ K+L+AGDS++F+  E   L +GIRRA R     P +           VMP    S
Sbjct: 190 TFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAGCNYVMPYGGFS 249

Query: 238 SVLSSDSMHIG-----------------------LLAAAAHAAATNSCFTVFFNPRASPS 274
           + L  D   +                         +  A   A     F V + PRAS  
Sbjct: 250 AFLREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVNGQPFEVIYYPRASTP 309

Query: 275 EFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 333
           EF +  +  VK+    R   GMRF+M FETE+SS +  +MGTI+ +   DPVRW +S WR
Sbjct: 310 EFCVK-SSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPVRWPDSPWR 368

Query: 334 SVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            ++V WDE    +   RVS W +E ++  P
Sbjct: 369 LLQVTWDEPDLLQNVKRVSPWLVELVSNMP 398



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S  +SY+EL  +L +MF IE   +  +R+   +++ D    V  
Sbjct: 615 CKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE---DSEMRN--HVLYRDATGAVKH 669

Query: 753 LGDDPWEAFVSNVWYIKIL 771
           +GD+P+  F      + IL
Sbjct: 670 IGDEPFSDFTKTAKRLTIL 688


>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
          Length = 615

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 150/367 (40%), Positives = 220/367 (59%), Gaps = 19/367 (5%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G    +  +LW  CAGPL  +P +G  V YFPQG+ E V A+T +E++   P   +LP 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPS 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F 
Sbjct: 77  KLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRPL---------VNSFT 127

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS +GGF VP++ A +  P LD S   PAQEL+A+DLH  +W+FRH +RG P+
Sbjct: 128 KVLTASDTSAYGGFFVPKKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGTPQ 187

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RH LTTGW+ F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G
Sbjct: 188 RHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 247

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           ++A+A HA      F V + PR+  S+F++   K++ A+ + +  VG RF M FE ++ S
Sbjct: 248 VIASAKHALDNQCIFIVVYKPRS--SQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFS 304

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            RRY GTI G++D  P  W  S WRS++V WDE  +  R  +VS WEIE L +    P  
Sbjct: 305 ERRYFGTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRS 363

Query: 369 FPLRLKR 375
             L+ KR
Sbjct: 364 SLLKNKR 370



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 3/96 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q   TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 512 QSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKI 569

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 777
            F D +   +L+GDDPW  F   V  I I S E+V+
Sbjct: 570 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 605


>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 590

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 133/240 (55%), Positives = 172/240 (71%), Gaps = 4/240 (1%)

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           ++Q   +FCK LTASDTSTHGGFSV R+ A +  P LD S   P QEL A+DLH  EWKF
Sbjct: 15  TRQTVRFFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQELAAKDLHGYEWKF 74

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
           +HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+  +  +L +G+RR  R  ++MPSSV
Sbjct: 75  KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSV 134

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +SS SMH+G+LA A+HA  T + F V++ PR   S+F+I L KY++ V      VGMRF+
Sbjct: 135 ISSHSMHLGVLATASHAVRTQTYFVVYYKPRT--SQFIISLNKYLETV-KNGYEVGMRFK 191

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M FE EES  RR+ GTI G+ D+ P +WS+S WRS+K+ WDE    +R  RVS WEIEP 
Sbjct: 192 MRFEGEESPERRFTGTIVGVGDMSP-QWSDSKWRSLKIQWDEPATIQRPERVSPWEIEPF 250



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 24/186 (12%)

Query: 609 DAAVGTENCNTDSQN--SVVFGVHIDSSGLLL-------PTTVSSFTTSVDPGVSSMPLG 659
           D ++G      D +N  S+V  +   SS L++       P   +  T  VD G  S P  
Sbjct: 397 DISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSK 456

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLT--PTRTFVKVYKSG-SVGRSLDISRFSSYNE 716
           +           Q S+ELL    Q   ++   +RT  KV   G +VGR++D++    Y +
Sbjct: 457 E----------QQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYED 506

Query: 717 LREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           L +EL  +F I+G+      + W +VF D END++L+GDDPW  F   V  I I S E+V
Sbjct: 507 LIDELENVFEIKGELRGI--NKWSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEV 564

Query: 777 QKMGEQ 782
           +KM  +
Sbjct: 565 KKMSRE 570


>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
          Length = 647

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/399 (41%), Positives = 226/399 (56%), Gaps = 42/399 (10%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  K L+ +LWHACAG +V +P + ++V YFPQGH+E         VD    N P +PP 
Sbjct: 11  GSEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAY----DHVD--FKNLP-IPPM 63

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPL--SPEEQKDTFVPIELGIPSKQPTNYFCKTLT 132
           ++C++  +   AD E+DEV+A++ L PL  +  E +D      LG  + + T  F KTLT
Sbjct: 64  VLCRVLAIKYMADPESDEVFAKLKLIPLKDNDHEYRDGEESNGLGSNNSEKTPSFAKTLT 123

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
            SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG P+RHLL
Sbjct: 124 QSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLL 183

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR---------------PPTVMPS 237
           TTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R               P     S
Sbjct: 184 TTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWNPIGGSYS 243

Query: 238 SVLSSDSM--------HIGLLAA-----AAHAAATNSCFTVFFNPRASPSEFVIPLTKYV 284
           S+L  D            G + A     AA  A +   F V + PRAS SEF +      
Sbjct: 244 SLLRDDERRSSSSLADRKGKVTAESVVEAAKLAVSGRGFEVVYYPRASSSEFCVKALD-A 302

Query: 285 KAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 343
           +A        GMRF+M FETE+SS +  +MGT++ +S  DPVRW NS WR ++V WDE  
Sbjct: 303 RAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLLQVAWDEPD 362

Query: 344 AGERQPRVSLWEIEPLTTF-PMYPSLFPLR--LKRPWHP 379
             +   RV+ W +E ++   P+ PS  P R  ++ P HP
Sbjct: 363 LLQYVKRVNPWLVELVSNVHPIIPSFSPPRKKMRLPQHP 401



 Score = 40.8 bits (94), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 79/180 (43%), Gaps = 33/180 (18%)

Query: 612 VGTENCN-TDSQNS--VVFGVHIDSSGLLLPTT-VSSFTTSVDPGVSSMPLGDSGFHNSM 667
           +GT  CN T+S+ S  V+FG       L+LP     S  T +  G S+         N +
Sbjct: 493 MGTSPCNDTESKKSHIVLFG------KLILPEEQKGSEKTQLSSGGSN--------QNCV 538

Query: 668 YGCMQDSSELLHNVGQIDQLTPTRTFVKVY-KSGSVGRSLDISRFSSYNELREELGQMFG 726
            G   +      N    D L       KV+ +S  VGR+LD+S   SY EL  +L  MFG
Sbjct: 539 AGSSSEEGSPCSNKAH-DGLGLETGHCKVFMESDDVGRTLDLSVLGSYEELGMKLSDMFG 597

Query: 727 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 786
           I+    + L S   +++ D    V   G++P+  F+     + ILS        EQG ES
Sbjct: 598 IQK--SEMLSS---VLYRDASGAVKYPGNEPFSEFLKTARRLTILS--------EQGSES 644


>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 144/338 (42%), Positives = 209/338 (61%), Gaps = 11/338 (3%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW  CAGPL  LP  G  + YFPQGH E + A+T  E+D   P++ +LP +L C + ++
Sbjct: 27  QLWKICAGPLCDLPKPGETIYYFPQGHIELIEASTKDELDQIRPHF-DLPSKLRCCVDDI 85

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASDTSTHGG 141
            +  D  TD+VYA++ L P    +  D   PI   + +++P  Y F K LT+SD +THGG
Sbjct: 86  QLKIDQNTDDVYAEIYLMP----DTTDVITPI-TTMDNQRPMVYSFSKILTSSDANTHGG 140

Query: 142 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVS 201
            S+ +R A +  P LD S + P Q L+A+DLH  EW F+H FRG P+RHL T+GWS+F +
Sbjct: 141 LSILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLFAT 200

Query: 202 AKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNS 261
            KRL+ GD+ +F+  E  +L +GIRRA       PS V+S+  M  G++A+  +A  +  
Sbjct: 201 TKRLIVGDAFVFLRGENGELGVGIRRARHQLGHKPSLVISTQCMKDGVIASVVNAFKSKC 260

Query: 262 CFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISD 321
            F V + P  S S+FV+   K+V A+ + +  VG RFRM FE ++ S +RY GTI G++D
Sbjct: 261 KFIVVYKP--SSSQFVVNYDKFVDAM-NNKFIVGSRFRMRFEGQDFSEKRYSGTIIGVND 317

Query: 322 LDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           + P  W +S WRS++V WDE +   R  +VS WEIE L
Sbjct: 318 MSP-HWKDSEWRSLQVQWDELSPFPRPDKVSPWEIEHL 354



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 3/98 (3%)

Query: 683 QIDQLTPTRTFVKVYKSGSV-GRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  +   TR  +KV   G V GR++D++ F  YN+L ++L ++F ++ +     R+ W++
Sbjct: 504 QSSKFNSTRRRIKVQMQGVVIGRAVDLTVFHGYNQLIQKLEELFDLKDELRS--RNQWEI 561

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           VF++ E +V+ LGDDPW  F +    I I S E+++KM
Sbjct: 562 VFINNEGNVMPLGDDPWPEFCNMAKKIFIGSKEEIEKM 599


>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
          Length = 620

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/351 (41%), Positives = 213/351 (60%), Gaps = 27/351 (7%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW  CAGPL  +P +G  V YFPQG+ E   A+T +E++   P   +LP +L C++  +
Sbjct: 4   QLWKLCAGPLCDIPKLGENVYYFPQGNIE--LASTREELNELQP-ICDLPSKLQCRVIAI 60

Query: 83  TMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
            +  +  +DE+YA++TL P     + P + ++ F P+          N F K LTASDTS
Sbjct: 61  HLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRPL---------VNSFTKVLTASDTS 111

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
            +GGFSVP++ A +  P LD S   PAQE++A DLHD +W+FRH +RG P+RH LTTGW+
Sbjct: 112 AYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWN 171

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
            F+++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G++A+A HA 
Sbjct: 172 EFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAF 231

Query: 258 ATNSCFTVFFNPR--------ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
                F V + PR           S+F++   K++ AV + + +VG RF M FE ++ S 
Sbjct: 232 DNQCIFIVVYKPRFIFCVFISIRSSQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSE 290

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           RRY GTI G+SD  P  W  S WRS++V WDE  +  R  +VS WEIE L 
Sbjct: 291 RRYFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLV 340



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 701 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 760
           ++GR++D+S  + Y++L  EL ++F I+G+ +   R+ W++ F D +   +L+GDDPW  
Sbjct: 536 TIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKIAFTDSDGYEMLVGDDPWPE 593

Query: 761 FVSNVWYIKILSPEDVQ 777
           F   V  I I S E+V+
Sbjct: 594 FCKMVKKILIYSKEEVK 610


>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
          Length = 593

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 211/342 (61%), Gaps = 19/342 (5%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW  CAGPL  +P +G +V YFPQG+ E V A+T +E++   P   +LP +L C++  +
Sbjct: 27  QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQCRVIAI 85

Query: 83  TMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
            +  +  +DE YA++TL P     + P + ++ F P+          N F K LTASD S
Sbjct: 86  HLKVENNSDETYAKITLMPDTTQVVIPTQNENQFRPL---------VNSFTKVLTASDIS 136

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
            +G FSVP++ A +  P LD S   PAQEL+A DLH  +W FRH +RG P+RHLLTTGW+
Sbjct: 137 ANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWN 196

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
            F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G++A+A HA 
Sbjct: 197 EFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAF 256

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
                F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S RRY GTI 
Sbjct: 257 DNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGTII 313

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           G+S+  P  W  S WRS++V WDE  +  R  +VS WEIE L
Sbjct: 314 GVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL 354



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 3/89 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q + TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 503 QSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKI 560

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKI 770
           +F   + D +L+GDDPW  F + V  I I
Sbjct: 561 IFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589


>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 647

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/411 (40%), Positives = 221/411 (53%), Gaps = 59/411 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           +CL+ +LWHACAG +V +PTV T+V YFPQGH+E      N          P +PP + C
Sbjct: 16  RCLDPQLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVN------FKTCPKVPPFVPC 69

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEE-QKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           ++  V   AD ETDEVYA++ L PL+  +   D  V   +G  ++     F KTLT SD 
Sbjct: 70  RVVAVKYMADPETDEVYAKLKLVPLNANDVDYDHDV---IGAETRDKPASFAKTLTQSDA 126

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGW
Sbjct: 127 NNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGW 186

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP--------------------PTVMP 236
           S FV+ K+LVAGDS++F+  E   L +GIRRA +                     P    
Sbjct: 187 STFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFPMPYSGF 246

Query: 237 SSVLSSDSMHI-------GL----------------LAAAAHAAATNSCFTVFFNPRASP 273
           S  L  D   I       GL                +  AA+ AA    F V + PRAS 
Sbjct: 247 SPFLREDDNRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVYYPRAST 306

Query: 274 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 332
            EF +  +  V+A   TR   G+RF+M FETE+SS +  +MGTI+ +   DP+ W NS W
Sbjct: 307 PEFCVKAS-LVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNWPNSPW 365

Query: 333 RSVKVGWDESTAGERQPRVSLWEIEPLTTFPM--YPSLFPLR--LKRPWHP 379
           R ++V WDE    +   RVS W +E ++  P   +    P R  L+ P HP
Sbjct: 366 RLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPFSPPRKKLRLPQHP 416



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR++D+S   SY+EL  +L  MFGIE K E   R    +++ D    +  
Sbjct: 564 CKVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIE-KSEMLSR----VLYCDSVGAIKH 618

Query: 753 LGDDPWEAFVSNVWYIKIL 771
           +GD+P+  F      + IL
Sbjct: 619 IGDEPFSDFTRTAKRLTIL 637


>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
          Length = 570

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 211/342 (61%), Gaps = 19/342 (5%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW  CAGPL  +P +G +V YFPQG+ E V A+T +E++   P   +LP +L C++  +
Sbjct: 27  QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQCRVIAI 85

Query: 83  TMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 137
            +  +  +DE YA++TL P     + P + ++ F P+          N F K LTASD S
Sbjct: 86  HLKVENNSDETYAKITLMPDTTQVVIPTQNENQFRPL---------VNSFTKVLTASDIS 136

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
            +G FSVP++ A +  P LD S   PAQEL+A DLH  +W FRH +RG P+RHLLTTGW+
Sbjct: 137 ANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWN 196

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 257
            F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G++A+A HA 
Sbjct: 197 EFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAF 256

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
                F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S RRY GTI 
Sbjct: 257 DNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGTII 313

Query: 318 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           G+S+  P  W  S WRS++V WDE  +  R  +VS WEIE L
Sbjct: 314 GVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL 354



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 41/58 (70%), Gaps = 2/58 (3%)

Query: 701 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 758
           ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W+++F   + D +L+GDDPW
Sbjct: 514 TIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKIIFTGSDEDEMLVGDDPW 569


>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 670

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 159/377 (42%), Positives = 216/377 (57%), Gaps = 37/377 (9%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +K L+ +LWHACAG +V +P V ++V YFPQGH+E   +     VD      P +PP ++
Sbjct: 5   DKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSN----VDFGAARIP-IPPLIL 59

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           C++  V   AD ETDEV+A++ L PL   E   +D+    E    S++P + F KTLT S
Sbjct: 60  CRVAAVKFLADPETDEVFARLRLVPLRNSELDYEDSDANGE-AEGSEKPAS-FAKTLTQS 117

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD+S +PP Q +IARD+H   WKFRHI+RG P+RHLLTT
Sbjct: 118 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLTT 177

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP------------------ 236
           GWS FV+ K+LVAGDS++F+  E   L +GIRRA R     P                  
Sbjct: 178 GWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGSGGLGLGP 237

Query: 237 ----SSVLSSDSMHIGL----LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVF 288
               S  +  +S    +    +  A   AA+N  F V + PRA+  EF I  T  V+   
Sbjct: 238 YGAFSGFMREESGRAKVSGESVREAVTLAASNQAFEVVYYPRANTPEFCI-RTSAVRGAM 296

Query: 289 HTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGER 347
             +   GMRF+M FETE+SS +  +MGTI  +  LDP+RW NS WR ++V WDE      
Sbjct: 297 RIQWCSGMRFKMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVSWDEPDLLHN 356

Query: 348 QPRVSLWEIEPLTTFPM 364
             RVS W +E ++  P+
Sbjct: 357 VKRVSPWLVELVSNVPI 373



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 686 QLTPTRTFVKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           QL    +  KV+ +S  VGR+LD+S  SSY EL   L  MFGIE    D L     +++ 
Sbjct: 552 QLGSDTSHCKVFMESEDVGRTLDLSCLSSYQELYMRLANMFGIERS--DMLS---HVLYC 606

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILS 772
           D    +  +G++P+  F+     + IL+
Sbjct: 607 DSSGALKQIGEEPFSEFMKTAKRLTILT 634


>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
 gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
          Length = 598

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 145/338 (42%), Positives = 209/338 (61%), Gaps = 6/338 (1%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW  CAGPL  +P +G +V YFPQG+ E V A+T +E++   P   +LP +L C++  +
Sbjct: 27  QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQCRVIAI 85

Query: 83  TMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGG 141
            +  +  +DE YA++TL P  +  E     +P +     +   N F K LTASD S +G 
Sbjct: 86  HLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRPLVNSFTKVLTASDISANGV 145

Query: 142 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVS 201
           FSVP++ A +  P LD S   PAQEL+A DLH  +W FRH +RG P+RHLLTTGW+ F +
Sbjct: 146 FSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTT 205

Query: 202 AKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNS 261
           +K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G++A+A HA     
Sbjct: 206 SKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQC 265

Query: 262 CFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISD 321
            F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S RRY GTI G+S+
Sbjct: 266 MFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSN 322

Query: 322 LDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
             P  W  S WRS++V WDE  +  R  +VS WEIE L
Sbjct: 323 FSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL 359



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 3/89 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q + TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 508 QSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKI 565

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKI 770
           +F   + D +L+GDDPW  F + V  I I
Sbjct: 566 IFTGSDEDEMLVGDDPWPEFCNMVKRIYI 594


>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
          Length = 541

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 142/352 (40%), Positives = 209/352 (59%), Gaps = 16/352 (4%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           +G EG N+ L  +LW  CAGPL  LP +G  V YFPQG+ EQ+ A+ N  +    P + +
Sbjct: 14  RGTEGVNRYLYDQLWKLCAGPLFDLPKIGEEVYYFPQGNIEQLVASANDNLCQLKPIF-D 72

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS---KQPTNYF 127
           +  ++ C + ++ +  +  TDEVYA+++L P SPE        +E+  P+   +Q   YF
Sbjct: 73  ISSRIHCNVISIKLKVETNTDEVYAKVSLLPCSPE--------VEITFPNDNNEQNIKYF 124

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
            K LTASD   HG F + ++ A +  P LD S   P+QE++A+DLHD  WKF+H FRG P
Sbjct: 125 TKVLTASDIGPHGDFILFKKDAIECLPPLDMSQLIPSQEIVAKDLHDHVWKFKHTFRGTP 184

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 247
           KRHL T+GW  FV  K L  GDS +F+  E  +  +GIR+     + M SSV+S +SMH 
Sbjct: 185 KRHLFTSGWKEFVKGKSLAVGDSFVFLRGENGESRVGIRKTSHQQSDMSSSVISKESMHH 244

Query: 248 GLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES 307
           G +A+A++A  T   F VF+ P++  S+F++   K++ AV + + +   RF M FE  + 
Sbjct: 245 GFIASASNAIHTKCMFDVFYKPKS--SKFIVNCDKFLDAV-NMKFNTSSRFTMKFEGHDF 301

Query: 308 SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           +   Y GTI  + D   + W  S WR+++V WDE+    R  +VSLWEIEPL
Sbjct: 302 NEIIYSGTIVKMEDF-SIYWKGSEWRNLQVQWDEAATIPRPNKVSLWEIEPL 352



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 3/90 (3%)

Query: 683 QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 742
           Q  +L+ T +  KV+  G V R++D++ F  YN +  EL ++F IEGK    + S W+L 
Sbjct: 454 QRKELSFTTSSTKVHMEG-VTRTVDLTVFDGYNHMIVELEKLFNIEGKLH--MHSQWKLT 510

Query: 743 FVDRENDVLLLGDDPWEAFVSNVWYIKILS 772
           F D E D++L+GDDPW  F + V  I I S
Sbjct: 511 FKDHEGDMMLVGDDPWPKFCNIVKEIVISS 540


>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
 gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
 gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
 gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
          Length = 590

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 216/367 (58%), Gaps = 21/367 (5%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G    +  +LW  CAGPL  +P +G  V YFPQG+ E V A+T +E++   P   +LP 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPS 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F 
Sbjct: 77  KLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRPL---------VNSFT 127

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS +GGF VP++ A +  P L      PAQEL+A+DLH  +W+FRH +RG P+
Sbjct: 128 KVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQ 183

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RH LTTGW+ F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G
Sbjct: 184 RHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 243

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           ++A+A HA      F V + P    S+F++   K++ A+ + +  VG RF M FE ++ S
Sbjct: 244 VIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFS 302

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            RRY GTI G++D  P  W  S WRS++V WDE  +  R  +VS WEIE L +    P  
Sbjct: 303 ERRYFGTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRS 361

Query: 369 FPLRLKR 375
             L+ KR
Sbjct: 362 SLLKNKR 368



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 3/96 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q   TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 487 QSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKI 544

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 777
            F D +   +L+GDDPW  F   V  I I S E+V+
Sbjct: 545 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580


>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 191/535 (35%), Positives = 267/535 (49%), Gaps = 92/535 (17%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L+S+LWHACAG +V +P V ++V YFPQGH+E   A TN +  +     P +P  ++C
Sbjct: 6   KSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAA----APRIPALVLC 59

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ++  V   AD ETDEVYA++ L P++  E   +D  V    G  + +    F KTLT SD
Sbjct: 60  RVAAVKFMADPETDEVYAKIRLVPIANNELDCEDDGVMGSSGSEAPEKPASFAKTLTQSD 119

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
            +  GGFSVPR  AE +FP LD+S  PP Q +IA+D+H   WKFRHI+RG P+RHLLTTG
Sbjct: 120 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTG 179

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----------------PPTVMPSSV 239
           WS FV+ K+LVAGDS++F+  E   L +GIRRA R                P    P  +
Sbjct: 180 WSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASPYAGFPKFL 239

Query: 240 LSSDS--MHIGL----------------------LAAAAHAAATNSCFTVFFNPRASPSE 275
              +S  M  G+                      +  AA  AA    F V + PRAS  E
Sbjct: 240 REDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPE 299

Query: 276 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 334
           F +  +  V++    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR 
Sbjct: 300 FCVKASG-VRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRL 358

Query: 335 VKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS--------T 381
           ++V WDE    +   RVS W +E ++  P+   L P      +L+ P HP          
Sbjct: 359 LQVTWDEPDLLQNVKRVSPWLVELVSNMPII-HLSPFSPPRKKLRIPQHPDFPFDGQFPM 417

Query: 382 SSFNDN-----------RDETASGLNWLRGGTGEQGLTTLNFQSL---GMFPWMQQRVEP 427
           SSF+ N            D T +G+   R       L+ L+  +    G+FP   QR + 
Sbjct: 418 SSFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKLQSGLFPTSFQRFDQ 477

Query: 428 -SFLGN-------DHNQQYQAMLAAG------MQSGDPVRQQFMQLQQPFQYLQQ 468
            S + N        +N+    +L  G       +S +    QF+   QP    QQ
Sbjct: 478 HSRITNGIITAHRKNNESISCLLTMGNSSQNLEKSANEKTPQFLLFGQPILTEQQ 532



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 13/113 (11%)

Query: 676 ELLHNVG-------QIDQLTPTRTFVKVY-KSGSVGRSLDISRFSSYNELREELGQMFGI 727
           E L NVG       Q  ++       KV+ +S  VGRSLD+S   SY EL   L  MFGI
Sbjct: 577 ENLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTRLANMFGI 636

Query: 728 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           E        +   +++ D    V   GD+P+  F      + IL       +G
Sbjct: 637 ERS-----ETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTILMDSGSNNIG 684


>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 777

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/370 (41%), Positives = 206/370 (55%), Gaps = 66/370 (17%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP +
Sbjct: 18  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 77

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TN 125
           + C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  +
Sbjct: 78  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 137

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRG
Sbjct: 138 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 197

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLL +GWSVFVSAKR                                         
Sbjct: 198 QPRRHLLQSGWSVFVSAKR----------------------------------------- 216

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
              L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE E
Sbjct: 217 ---LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGE 261

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           E++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P +
Sbjct: 262 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCH 320

Query: 366 PSLFPLRLKR 375
            +  P+R KR
Sbjct: 321 VNPLPVRFKR 330



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 672 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 730
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 630 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 689

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 790
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 690 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 748

Query: 791 SGQRANSRGNCGRDPVG 807
           S   +  RG   RDP G
Sbjct: 749 SLSDSLGRGVASRDPRG 765


>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 775

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/370 (41%), Positives = 206/370 (55%), Gaps = 66/370 (17%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP +
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TN 125
           + C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  +
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLL +GWSVFVSAKR                                         
Sbjct: 196 QPRRHLLQSGWSVFVSAKR----------------------------------------- 214

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
              L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE E
Sbjct: 215 ---LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGE 259

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           E++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P +
Sbjct: 260 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCH 318

Query: 366 PSLFPLRLKR 375
            +  P+R KR
Sbjct: 319 VNPLPVRFKR 328



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 672 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 730
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 628 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 687

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 790
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 688 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 746

Query: 791 SGQRANSRGNCGRDPVG 807
           S   +  RG   RDP G
Sbjct: 747 SLSDSLGRGVASRDPRG 763


>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
 gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
          Length = 620

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/346 (44%), Positives = 212/346 (61%), Gaps = 8/346 (2%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELW ACAGPLV+LP  G RV YFPQGH EQ+ A   ++ +  + +  NLP +++
Sbjct: 42  NNALYKELWDACAGPLVTLPREGERVYYFPQGHIEQLGAPIQQQSEHQMASL-NLPSKIL 100

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASD 135
           C++ NV   A+  TD+VYAQ+ L P    EQ D   P   L  P +   + F + LT SD
Sbjct: 101 CKVINVQCKAEPITDQVYAQIMLLP--EPEQIDVISPDPPLPEPERCVVHSFRRILTVSD 158

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
            S+H  F V ++ AE   P LD S Q P QEL+A DL+  +W F+HIF+G+  +HLLTTG
Sbjct: 159 ISSHDHFFVDQKHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQHIFQGKSNKHLLTTG 218

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WS FVS+K+LV+GD  +F+  E  +L +G+RR +   T + SS  S+   H  LLA A++
Sbjct: 219 WSAFVSSKKLVSGDMFIFLRGENGELRVGVRRLMGRKTNILSSATSNQIRH-SLLAVASY 277

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           A +T S F VF+ PR S SEF++ + KY++A  H +  +GMRF M FE EE  + R  GT
Sbjct: 278 AISTGSLFCVFYEPRTSRSEFIVSVNKYIEARNH-KFCIGMRFLMRFEGEEVPIERINGT 336

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           I  + +  P RW +S WR  KV WDE +      RVS WE+E +++
Sbjct: 337 IVSM-ETSP-RWPDSEWRCFKVRWDEPSLIVHPERVSPWEMENISS 380



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)

Query: 701 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 760
           ++GRS+D+++F  + +L +EL  MF IEG+     +  W +V+ D ++++ L+GD  WE 
Sbjct: 548 ALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTKK-WLIVYTDADSEMKLVGDYQWEV 606

Query: 761 FVSNVWYIKI 770
             + V  I I
Sbjct: 607 VCNMVKKILI 616


>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
           thaliana [Arabidopsis thaliana]
          Length = 619

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 154/393 (39%), Positives = 221/393 (56%), Gaps = 45/393 (11%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQ--------------------- 52
           +G    +  +LW  CAGPL  +P +G +V YFPQGH E                      
Sbjct: 18  DGSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVSSLSLSLPLFSFSLHLFSLS 77

Query: 53  -----VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQP-----L 102
                V  +T +E++   P   +LP +L C++  + +  +  +DE YA++TL P     +
Sbjct: 78  LLSLSVETSTREELNELQP-ICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVV 136

Query: 103 SPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQP 162
            P + ++ F P+          N F K LTASDTS HGGF VP++ A +  PSLD S   
Sbjct: 137 IPTQNENQFRPL---------VNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPL 187

Query: 163 PAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLL 222
           PAQEL+A DLH  +W+F H +RG P+RHLLTTGW+ F ++K+LVAGD ++F+  E  +L 
Sbjct: 188 PAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELR 247

Query: 223 LGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTK 282
           +GIRRA      +PSS++S D M  G++A+A HA      FTV + PR+  S+F++   K
Sbjct: 248 VGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDK 305

Query: 283 YVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 342
           ++ AV + + +VG RF M  E ++ S RR  GTI G+SD  P  W  S WRS++V WDE 
Sbjct: 306 FLDAV-NNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSP-HWKCSEWRSLEVQWDEF 363

Query: 343 TAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           T+     +VS W+IE L      P  F L+ KR
Sbjct: 364 TSFPGPKKVSPWDIEHLMPAINVPRSFLLKNKR 396



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 17/169 (10%)

Query: 604 SYNGKDAAVGTENCNTDS-QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 662
           +YN +      EN  T +  N  +FGV +D+     P  +      +   +S +  G   
Sbjct: 462 NYNNQMVTEMEENITTKTGTNFRLFGVTLDT-----PPVIKDPIEEIGSEISKLTEGKKF 516

Query: 663 FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREEL 721
               +   ++  +E+     Q  Q + +RT  KV   G ++GR++D+S  + Y++L  EL
Sbjct: 517 ---GLSQTLRSPTEI-----QNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILEL 568

Query: 722 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 770
            ++F I+G+ +   R+ W++ F D + D +L+GDDPW  F + V  I I
Sbjct: 569 EKLFDIKGQLQT--RNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 615


>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 771

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/370 (41%), Positives = 206/370 (55%), Gaps = 66/370 (17%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP +
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TN 125
           + C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  +
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLL +GWSVFVSAKR                                         
Sbjct: 196 QPRRHLLQSGWSVFVSAKR----------------------------------------- 214

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
              L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE E
Sbjct: 215 ---LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGE 259

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           E++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P +
Sbjct: 260 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCH 318

Query: 366 PSLFPLRLKR 375
            +  P+R KR
Sbjct: 319 VNPLPVRFKR 328



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 672 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 730
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 624 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 683

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 790
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 684 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 742

Query: 791 SGQRANSRGNCGRDPVG 807
           S   +  RG   RDP G
Sbjct: 743 SLSDSLGRGVASRDPRG 759


>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 652

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/370 (41%), Positives = 206/370 (55%), Gaps = 66/370 (17%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP +
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TN 125
           + C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  +
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLL +GWSVFVSAKR                                         
Sbjct: 196 QPRRHLLQSGWSVFVSAKR----------------------------------------- 214

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
              L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE E
Sbjct: 215 ---LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGE 259

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           E++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P +
Sbjct: 260 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCH 318

Query: 366 PSLFPLRLKR 375
            +  P+R KR
Sbjct: 319 VNPLPVRFKR 328


>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
 gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
          Length = 752

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 158/417 (37%), Positives = 229/417 (54%), Gaps = 69/417 (16%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN-LPP 73
           G+ K L+ +LW ACAG +V LPTVG++++YFPQGH+EQ A++         P++P  L P
Sbjct: 33  GEEKHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASS---------PDFPRALGP 83

Query: 74  Q--LICQLHNVTMHADVETDEVYAQMTLQPLS-PEEQKDTFVPIELGIPSKQPTNYFCKT 130
              + C++ +V   AD ETDEV+A + L P S  +E  D    +    PS +    F KT
Sbjct: 84  AGTVPCRVLSVKFLADKETDEVFASLRLHPESGSDEDNDRAAALS---PSPEKPASFAKT 140

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT SD +  GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG P+RH
Sbjct: 141 LTQSDANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRH 200

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA---------------------- 228
           LLTTGWS FV+ K+LVAGD+++F+ +   +L +G+RR+                      
Sbjct: 201 LLTTGWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNADALLWHSASSRSS 260

Query: 229 ----IRPP--TVMPSSVLSSDS-----------------------MHIGLLAAAAHAAAT 259
               +RPP  T +    L  ++                       +    +  AA  AA+
Sbjct: 261 SRWELRPPMDTGLSDGTLMGENGSSRSAGGGGGNGGGSFTRNRAKVTAKSVLDAATLAAS 320

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITG 318
              F V + PRAS +EF +   + V+A        GMRF+M FETE+SS +  +MGTI+ 
Sbjct: 321 GKAFEVVYYPRASTAEFCV-RAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTISA 379

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           +   DP+ W +S WR ++V WDE    +   RVS W++E ++T PM    F L  K+
Sbjct: 380 VQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLPMQLPPFSLPRKK 436



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 698 KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDP 757
           +SG V R+LD+S F SY+EL ++L  +F +     D  +   ++V+ D E   +  G +P
Sbjct: 678 ESGDVKRTLDLSSFGSYDELYKQLATVFCV-----DMAKISGRVVYKDSEGSTIHTGGEP 732

Query: 758 WEAFVSNVWYIKILS 772
           +  FV +V  + IL+
Sbjct: 733 YANFVKSVRRLTILA 747


>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/410 (39%), Positives = 221/410 (53%), Gaps = 56/410 (13%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCL+ +LWHACAG +V +P V  RV YFPQGH+E   A  +        N P +P   +C
Sbjct: 16  KCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVD------FRNCPKVPSYTLC 69

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ++  +   AD +TDEV+A++ L P++  E   +D  +    G    +PT+ F KTLT SD
Sbjct: 70  RVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTS-FAKTLTQSD 128

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
            +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTG
Sbjct: 129 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTG 188

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP------------------- 236
           WS FV+ K+LVAGDS++F+  E   L +GIRRA R     P                   
Sbjct: 189 WSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGA 248

Query: 237 -SSVLSSDSMHI-----GL----------------LAAAAHAAATNSCFTVFFNPRASPS 274
            S+ L  D   +     G+                +  AA  A+    F + F PRAS  
Sbjct: 249 FSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRASTP 308

Query: 275 EFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 333
           EF +     VKA    R   GMRF+M FETE+SS +  +MGTI  +   DP+RW  S WR
Sbjct: 309 EFCVK-AALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWR 367

Query: 334 SVKVGWDESTAGERQPRVSLWEIEPLTTF-PMYPSLFP---LRLKRPWHP 379
            ++V WDE    +   RVS W +E +++  P++ + F     + + P HP
Sbjct: 368 LLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQHP 417



 Score = 43.1 bits (100), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +LG MFGI     D   +   +++ D    V  
Sbjct: 615 CKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGI-----DNSETLNHVLYRDVSGAVKH 669

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           +GD+ +  F+     + IL+      +G
Sbjct: 670 VGDEQFSDFIKTARRLTILTDSGSNNVG 697


>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 701

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/410 (39%), Positives = 221/410 (53%), Gaps = 56/410 (13%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCL+ +LWHACAG +V +P V  RV YFPQGH+E   A  +        N P +P   +C
Sbjct: 16  KCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVD------FRNCPKVPSYTLC 69

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQPTNYFCKTLTASD 135
           ++  +   AD +TDEV+A++ L P++  E   +D  +    G    +PT+ F KTLT SD
Sbjct: 70  RVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTS-FAKTLTQSD 128

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
            +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTG
Sbjct: 129 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTG 188

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP------------------- 236
           WS FV+ K+LVAGDS++F+  E   L +GIRRA R     P                   
Sbjct: 189 WSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGA 248

Query: 237 -SSVLSSDSMHI-----GL----------------LAAAAHAAATNSCFTVFFNPRASPS 274
            S+ L  D   +     G+                +  AA  A+    F + F PRAS  
Sbjct: 249 FSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRASTP 308

Query: 275 EFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 333
           EF +     VKA    R   GMRF+M FETE+SS +  +MGTI  +   DP+RW  S WR
Sbjct: 309 EFCVK-AALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWR 367

Query: 334 SVKVGWDESTAGERQPRVSLWEIEPLTTF-PMYPSLFP---LRLKRPWHP 379
            ++V WDE    +   RVS W +E +++  P++ + F     + + P HP
Sbjct: 368 LLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQHP 417


>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
 gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
          Length = 671

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/402 (39%), Positives = 218/402 (54%), Gaps = 53/402 (13%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCL+S+LWHACAG +V +P V ++V YFPQGH+E    + +         +  +P  + C
Sbjct: 6   KCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVDF-------GHFQIPALIPC 58

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPE---------EQKDTFVPIELGIPSKQPTNYFC 128
           ++  +   A+ ETDEVYA++ L P S           E  D  +P   GI S++    F 
Sbjct: 59  KVSAIKYMAEPETDEVYAKIRLTPSSNSDLMFGDGCGEDSDDRLPN--GIESQEKPASFA 116

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG P+
Sbjct: 117 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPR 176

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--PPTVMPSSVLSSDSMH 246
           RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R        SS  +S   +
Sbjct: 177 RHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSSGWNSFGGY 236

Query: 247 IGLL-------------------------AAAAHAAATNSCFTVFFNPRASPSEFVIPLT 281
            G L                           AA  AA    F V + PRAS  EF +  +
Sbjct: 237 SGFLREDESKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYYPRASTPEFCVRAS 296

Query: 282 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWD 340
             V+   H +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR ++V WD
Sbjct: 297 A-VRTAMHIQWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPNSPWRLLQVAWD 355

Query: 341 ESTAGERQPRVSLWEIEPLTTFPMY------PSLFPLRLKRP 376
           E    +   RVS W  E ++  P        P    LRL +P
Sbjct: 356 EPDLLQNVKRVSPWLAELVSNMPAIHLSPFSPPRKKLRLPQP 397



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  +GR+LD+S   SY EL  +L  MFGIE      + S   +++ D       
Sbjct: 588 CKVFLESEDIGRTLDLSVLGSYEELHRKLASMFGIE---SSEMLS--NVLYRDAAGATKH 642

Query: 753 LGDDPWEAFVSNVWYIKILS 772
            GD+P+  F+     + ILS
Sbjct: 643 AGDEPFSEFLKTARRLTILS 662


>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 661

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 155/370 (41%), Positives = 206/370 (55%), Gaps = 66/370 (17%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP +
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TN 125
           + C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  +
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 245
           QP+RHLL +GWSVFVSAKR                                         
Sbjct: 196 QPRRHLLQSGWSVFVSAKR----------------------------------------- 214

Query: 246 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 305
              L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE E
Sbjct: 215 ---LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGE 259

Query: 306 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365
           E++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P +
Sbjct: 260 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCH 318

Query: 366 PSLFPLRLKR 375
            +  P+R KR
Sbjct: 319 VNPLPVRFKR 328


>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
          Length = 683

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/386 (39%), Positives = 213/386 (55%), Gaps = 47/386 (12%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +KCL+ +LWHACAG +V +P++ +RVVYFPQGH+E      +          P +PP ++
Sbjct: 12  DKCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-------GNPRIPPLVL 64

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPL--SPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           C++  V   AD E+DEVYA++ L PL  +  E +D  +    GI + +    F KTLT S
Sbjct: 65  CRVSAVKYLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPEKPASFAKTLTQS 124

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   W+FRHI+RG P+RHLLTT
Sbjct: 125 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTT 184

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-------------------PTVM 235
           GWS FV+ K LVAGDS++F+  E   L +GIRRA R                    P   
Sbjct: 185 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRG 244

Query: 236 PSSVLSSDSMHIGL-----------------LAAAAHAAATNSCFTVFFNPRASPSEFVI 278
            S  L  D     L                 +A AA  AA    F + + PRAS  EF +
Sbjct: 245 YSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCV 304

Query: 279 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 337
             +  V+A    +   GM+F+M FET++SS +  +MG I+ +   DP+RW NS WR ++V
Sbjct: 305 KASS-VRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQV 363

Query: 338 GWDESTAGERQPRVSLWEIEPLTTFP 363
            WDE    +   RV+ W +E ++  P
Sbjct: 364 TWDEPDLLQNVKRVNPWLVELVSHVP 389


>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
          Length = 705

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 160/414 (38%), Positives = 221/414 (53%), Gaps = 46/414 (11%)

Query: 8   LCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPN 67
           L +    G+ +CL+ +LWHACAG +V +P   +RV YFPQGH+E   +            
Sbjct: 17  LVEMKEVGEERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANSGGGGAAAELAAT 76

Query: 68  Y-PNLPPQLI-CQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIPSK 121
             P L P L+ C +  V   AD ETDEV+A++ L P+ P+E    + +   P+E    ++
Sbjct: 77  VGPRLLPALVLCSVAGVRFLADPETDEVFAKIRLVPVGPDEVAFREPEGLGPLE--AEAQ 134

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           +    F KTLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRH
Sbjct: 135 EKLASFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRH 194

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----------- 230
           I+RG P+RHLLTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R           
Sbjct: 195 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSG 254

Query: 231 --PPTVMPSSVLSSD-----------------SMHIGLLAAAAHAAATNSCFTVFFNPRA 271
              P     S    D                  + I  +  AA  AA    F V + PRA
Sbjct: 255 WNAPGYGGFSAFLKDEENKMMNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYYPRA 314

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 330
           S  EFV+     ++A        GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS
Sbjct: 315 STPEFVVKAAS-MQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNS 373

Query: 331 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 379
            WR ++V WDE    +    VS W +E +++ P    L P      +L+ P HP
Sbjct: 374 PWRLLQVSWDEPDLLQNVKCVSPWLVELVSSIPPI-HLGPFSPPRKKLRVPQHP 426


>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
 gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
          Length = 644

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 211/383 (55%), Gaps = 37/383 (9%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ +CL+ +LWHACAG +V +P V +RV YFPQGH+E  A       D        LPP 
Sbjct: 5   GEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEH-AHGGGGATDLAGARARPLPPL 63

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTL 131
           ++C +  V   AD ETDEV+A++ L P +P E  +   P E GI    +++  + F KTL
Sbjct: 64  VLCTVAGVRFLADPETDEVFAKIRLVPAAPGEV-EFGEPREFGIDPEDAREKLSSFAKTL 122

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHIFRG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHL 182

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMPSS 238
           LTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P     S
Sbjct: 183 LTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALS 242

Query: 239 VLSSD-----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLT 281
               D                  + I  +  AA  AA+   F V + PRAS  EFV+   
Sbjct: 243 AFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAA 302

Query: 282 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWD 340
             V+     +   GMRF+M FETE+SS +  +MGTI      D +RW NS WR ++V WD
Sbjct: 303 S-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLLQVSWD 361

Query: 341 ESTAGERQPRVSLWEIEPLTTFP 363
           E    +    V+ W +E +++ P
Sbjct: 362 EPDLLQNVKCVNPWLVEIVSSIP 384


>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 608

 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 152/388 (39%), Positives = 211/388 (54%), Gaps = 44/388 (11%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           +CL+S+LWHACAG +V +P + T+V YFPQGH+E           +H      +PP + C
Sbjct: 6   RCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKVEYFGKNH---QTRVPPLIPC 62

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS-------KQPTNYFCKT 130
           +L  +   AD +TDEVY +M L PL   E  D+     LG  +       ++P   F KT
Sbjct: 63  RLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNTNSGGVENQEKPPTSFAKT 122

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT SD +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+RH
Sbjct: 123 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRH 182

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------------- 230
           LLTTGWS FV+ KRLVAGDS++F+  E   L +GIRRA +                    
Sbjct: 183 LLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWNNPLFGGG 242

Query: 231 -------PPTVMPSSVLSSDSMHIGLLA-----AAAHAAATNSCFTVFFNPRASPSEFVI 278
                    + +  +    D   +G +A      A   A     F V + PRAS  EF +
Sbjct: 243 GGFLCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYYPRASSPEFCV 302

Query: 279 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 337
             +  VKA    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW +S WR ++V
Sbjct: 303 KAS-VVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQV 361

Query: 338 GWDESTAGERQPRVSLWEIEPLTTFPMY 365
            WDE    +    V+ W +E ++  P +
Sbjct: 362 VWDEPDLLQNVKCVNPWLVELVSNMPTF 389


>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
          Length = 744

 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 145/317 (45%), Positives = 198/317 (62%), Gaps = 18/317 (5%)

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL-----------GIPSKQ 122
           Q+IC++ +V + A+V  DE+YAQ++L         D  V   L           GI    
Sbjct: 1   QIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTI 60

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
           P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL A+DL+   W+FRHI
Sbjct: 61  P-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHI 119

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-PPTVMPSSVLS 241
           +RGQP+RHLLTTGWS F + K+L  GD+VLF+  +  +L LGIRRA R     +P + L 
Sbjct: 120 YRGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLL 179

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
                + +L+  A A +    F +++NPRASP+EF++P  KY+++  H   S+GMR ++ 
Sbjct: 180 CQLSRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHP-FSMGMRLKIR 238

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
            ETE++  +RY G ITG+ D+DP+RW NS WR + V WD++       RVS WEIE  + 
Sbjct: 239 VETEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSL 298

Query: 362 FPMYPSLFPLR--LKRP 376
              +   FPL+   KRP
Sbjct: 299 VSSFS--FPLKSTSKRP 313



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 2/88 (2%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR   KVYK  S VGR++D+++ + Y++L  EL ++  +EG   DP R GWQ+V+ D  +
Sbjct: 637 TRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELERLLDMEGLLRDP-RKGWQVVYTDNVS 695

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           D++L+GD+PW+ F   V  I I + E+V
Sbjct: 696 DMMLVGDEPWQEFCDIVSKIHIFTREEV 723


>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 589

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 158/386 (40%), Positives = 214/386 (55%), Gaps = 43/386 (11%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           +CL+S+LWHACAG +V +P + T+V YFPQGH+E       K VD    N   +PP + C
Sbjct: 6   RCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHG---KRVD-FPKNQTRVPPLIPC 61

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIPS-----KQPTNYFC 128
           +L  +   AD +TDEVY +M L PL   E    Q D F+    G        ++P   F 
Sbjct: 62  RLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNSAGGGGVDQGQEKPPTSFA 121

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+    WKFRHI+RG P+
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHIYRGTPR 181

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP--------------PTV 234
           RHLLTTGWS FV+ KRLVAGDS++F+  E   L +GIRRA +               P  
Sbjct: 182 RHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGGWNNPLF 241

Query: 235 MPSSVLSSDS---------MHIGLLAA-----AAHAAATNSCFTVFFNPRASPSEFVIPL 280
               +  S+S         M +G +AA     A   A     F V + PRAS  EF +  
Sbjct: 242 GGGFLCGSESNLMSGGDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYYPRASSPEFCVKA 301

Query: 281 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 339
           +  VKA    +   GMRF+M FETE+SS +  +MGTI+ +   DP+ W +S WR ++V W
Sbjct: 302 S-VVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPDSPWRLLQVVW 360

Query: 340 DESTAGERQPRVSLWEIEPLTTFPMY 365
           DE    +    V+ W +E ++  P +
Sbjct: 361 DEPDLLQNVKCVNPWLVELVSNMPTF 386


>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 632

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 192/307 (62%), Gaps = 16/307 (5%)

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-------- 115
           H+     +PP + C++ +V + AD  TDEVYAQ++L  +  EE K      E        
Sbjct: 25  HLTAVAAVPPHVFCRVVDVNLQADPATDEVYAQVSLL-VDNEEAKRRMRQGESEEACDGD 83

Query: 116 ---LGIPSKQPT--NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIAR 170
               G   ++    + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++LQ P+QEL+A+
Sbjct: 84  GEDTGAAKRRARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAK 143

Query: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           DLH  EW+FRHI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E   L LG+RRA +
Sbjct: 144 DLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQ 203

Query: 231 PPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 290
              V P   L +    +  L   AHA A  S F +++NPR   SEF++P  K++++ F  
Sbjct: 204 LKNVSPFPALFNQDSSLRSLGNVAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRS-FSQ 262

Query: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR 350
             SVGMRF+M +E E++S RR  G ITG  + D ++   S W+ + V WD+     R  R
Sbjct: 263 PFSVGMRFKMKYENEDASERRSTGMITGSRESD-LKSHGSKWKCLVVRWDDDVECRRLNR 321

Query: 351 VSLWEIE 357
           VS WEIE
Sbjct: 322 VSPWEIE 328


>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
          Length = 704

 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           +L +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 237
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 238 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 268
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 269 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 327
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 328 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 594 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 649

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 793
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 650 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 699


>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
 gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
          Length = 619

 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 152/386 (39%), Positives = 216/386 (55%), Gaps = 47/386 (12%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCL+S+LWHACAG +V +P + T+V YFPQGH+E      + +VD    +   +PP + C
Sbjct: 14  KCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHA----HNKVDF---SKTRVPPLIPC 66

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           ++  +   AD ETDEVY +M L PL   E   ++D F     G+ S++    F KTLT S
Sbjct: 67  RISAMKYMADPETDEVYVKMKLTPLRENELDFEEDCFFGNN-GLESQEKPASFAKTLTQS 125

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 126 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTT 185

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT--------------------- 233
           GWS FV+ K+LVAGDS++F+  E   L +GIRRA +                        
Sbjct: 186 GWSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTWNRVSPLF 245

Query: 234 --VMPSSVLSSDSMHIGL-----------LAAAAHAAATNSCFTVFFNPRASPSEFVIPL 280
             V    +  +D+   G            +  A + A     F V + PRAS  EF + +
Sbjct: 246 GGVGSGFLCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYYPRASTPEFCVKV 305

Query: 281 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 339
           +  VK+    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW +S WR ++V W
Sbjct: 306 SS-VKSAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVQDPIRWPDSPWRLLQVVW 364

Query: 340 DESTAGERQPRVSLWEIEPLTTFPMY 365
           DE    +    V+ W +E ++  P +
Sbjct: 365 DEPDLLQNVKCVNPWLVELVSNMPNF 390


>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
 gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/386 (40%), Positives = 215/386 (55%), Gaps = 47/386 (12%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD-SHIPNYPNLPPQLI 76
           KC++S+LWHACAG +V +P V ++V YFPQGH+E     T   VD S +P  P L   ++
Sbjct: 7   KCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEH----TLMNVDFSALPRSPAL---IL 59

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI---PSKQPTNYFCKTLTA 133
           C++  V   AD ETDEVYA++ + P+  +          LG     + +  N F KTLT 
Sbjct: 60  CRVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQ 119

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFSVPR  AE +FP LD++  PP Q + A+D+H   WKFRHI+RG P+RHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYRGTPRRHLLT 179

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------------S 237
           TGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R     P                S
Sbjct: 180 TGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFS 239

Query: 238 SVLSSDSMHIGLLAA------------------AAHAAATNSCFTVFFNPRASPSEFVIP 279
           + L  +    G L +                  AAH A++   F V + PRA+  EF + 
Sbjct: 240 AFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQPFEVVYYPRANTPEFCVR 299

Query: 280 LTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVG 338
            +  V A    +   GMRF+M FETE+SS +  +MGTI+ I   DP+RW NS WR ++V 
Sbjct: 300 ASS-VNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVA 358

Query: 339 WDESTAGERQPRVSLWEIEPLTTFPM 364
           WDE    +    VS W +E ++  P+
Sbjct: 359 WDEPDLLQNVKHVSPWLVELVSNMPV 384



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL + L  MFG+E    D L    ++++ D    V  
Sbjct: 591 CKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLER--PDMLT---RVLYHDATGAVKH 645

Query: 753 LGDDPWEAFVSNVWYIKIL 771
            GD+P+  FV +   + IL
Sbjct: 646 TGDEPFSDFVKSAKRLTIL 664


>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
 gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
          Length = 793

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/413 (38%), Positives = 226/413 (54%), Gaps = 67/413 (16%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN-LPPQ-- 74
           K L+ +LW ACAG +V LPTVG++++YFPQGH+EQ A++         P++P  L P   
Sbjct: 36  KHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASS---------PDFPRALGPAGT 86

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           + C++ +V   AD ETDEV+A + L P S  ++ +         PS +    F KTLT S
Sbjct: 87  VPCRVLSVKFLADKETDEVFASLRLHPESGSDEDNDRAAAP--SPSPEKPASFAKTLTQS 144

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 145 DANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 204

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA-------------------------- 228
           GWS FV+ K+LVAGD+++F+ +   +L +G+RR+                          
Sbjct: 205 GWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNADALLWHSASSRSSSRWE 264

Query: 229 IRPP--------TVM-----------------PSSVLSSDSMHIGLLAAAAHAAATNSCF 263
           +RPP        T+M                  S   +   +    +  AA  AA+   F
Sbjct: 265 LRPPMDTGLSDGTLMRENGSSRSAGGGAGNGGGSFTRNRAKVTAKSVLDAATLAASGKAF 324

Query: 264 TVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDL 322
            V + PRAS +EF +   + V+A        GMRF+M FETE+SS +  +MGTI+ +   
Sbjct: 325 EVVYYPRASTAEFCV-RAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTISAVQAA 383

Query: 323 DPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           DP+ W +S WR ++V WDE    +   RVS W++E ++T PM    F L  KR
Sbjct: 384 DPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLPMQLPPFSLPRKR 436


>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
          Length = 706

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           +L +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 237
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 238 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 268
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 269 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 327
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 328 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 596 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 651

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 793
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 652 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 701


>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
          Length = 705

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           +L +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 237
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 238 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 268
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 269 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 327
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 328 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 595 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 650

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 793
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 651 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 700


>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
          Length = 443

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/393 (38%), Positives = 219/393 (55%), Gaps = 52/393 (13%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           +  CL+S+LWHACAG +V +P + ++V YFPQGH+E      +  +       P +PP +
Sbjct: 5   EKNCLDSQLWHACAGGMVQMPPMNSKVFYFPQGHAEHTLGNVDFSM------LPKIPPLI 58

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK--DTFVPIELGIPSKQPTNYFCKTLTA 133
           +C++  V   ADVETDEVYA++ L P+   E +  D  +       +++PT+ F KTLT 
Sbjct: 59  LCRVGAVKYLADVETDEVYAKIRLVPVGNNEPEFEDAVLGSSASETAEKPTS-FAKTLTQ 117

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHLLT
Sbjct: 118 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLLT 177

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTV---MP-------------- 236
           TGWS FV+ K+LVAGDS++F+  +   L +GIRRA R   +    P              
Sbjct: 178 TGWSTFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPSGWNTGAPGSYGGF 237

Query: 237 SSVLSSDSMHI---GL---------------------LAAAAHAAATNSCFTVFFNPRAS 272
           S+ L  D   I   G+                     +  AA+ AAT   F V + PRA+
Sbjct: 238 SAYLREDENRIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFEVVYYPRAN 297

Query: 273 PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSH 331
             EF +  +  V A    +   G+RF+M FETE+SS +  +MGTI+ +   DP+ W NS 
Sbjct: 298 TPEFCVRASS-VNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVADPIHWPNSP 356

Query: 332 WRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
           WR ++V WDE    +    VS W +E ++  PM
Sbjct: 357 WRLLQVTWDEPDLLQNVKHVSPWLVELVSNMPM 389


>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 601

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/378 (40%), Positives = 226/378 (59%), Gaps = 27/378 (7%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G  + +  +LW  CAGPL  +P +G +V YFPQGH E V A+T ++++   P   +LP 
Sbjct: 19  DGSKRYMYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELVEASTGEKLNELQP-IVDLPS 77

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLS-----PEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE YA++TL P +     P + ++ F P+          N F 
Sbjct: 78  KLQCRVITIQLKVERNSDETYAEITLMPYTTQVVIPTQNENQFRPL---------VNSFT 128

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS HGGFSVPR+ A +  P LD S   PAQEL+  DLH  +W+F+H +RG P+
Sbjct: 129 KVLTASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPR 188

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGW+ F+++K+LVAGD ++F+  E  +L +GIRRA      +PSS++S +SM  G
Sbjct: 189 RHLLTTGWNAFITSKKLVAGDVIVFLRGETGELRVGIRRAGYQQGNIPSSIISIESMRHG 248

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           ++A+A HA      F V + PR+  S+F++   K++ A+ + + +VG RF   FE ++ S
Sbjct: 249 VIASAKHAFDNQCMFIVVYKPRS--SQFIVNYDKFLDAM-NNKFNVGSRFTKRFEEDDFS 305

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 368
            RRY GTI G+ D  P  W  S WRS+K   DE  +  R  +VS WEIE  T     PS 
Sbjct: 306 ERRYFGTIIGVIDFSP-HWKCSEWRSLK---DEFASFPRPDKVSPWEIEYST-----PSS 356

Query: 369 FPLRLKRPWHPSTSSFND 386
             LRL    +  +  FN+
Sbjct: 357 NVLRLSMLKNKCSREFNE 374



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 3/96 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  QL+ TRT  KV   G ++GR+LD+S  + Y++L  EL ++F ++G+ ++  R+ W++
Sbjct: 506 QSKQLSSTRTCTKVQMHGVALGRALDLSVLNGYDQLILELEKLFDLKGQLQN--RNQWEI 563

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 777
            F D E D +L+GDDPW  F + V  I I S E+V+
Sbjct: 564 AFKDNEEDEMLVGDDPWPEFCNMVKKIIIYSNEEVK 599


>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
 gi|238014578|gb|ACR38324.1| unknown [Zea mays]
 gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 340

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/325 (44%), Positives = 197/325 (60%), Gaps = 20/325 (6%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           ELWHACAGP+V+LP  G+ VVY PQGH                    +LPP ++C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA---------DLPPHVVCRVADV 74

Query: 83  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 133
            + AD  TDEV A++ L        + L     +      +     K    + FCKTLTA
Sbjct: 75  ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 253
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +SDS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
           A +    S F + +NPRA+ SE++IP  K++K++ H  V +G R       E+ S RR  
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHP-VCIGARINFQCHNEDVSERRS- 312

Query: 314 GTITGISDLDPVRWSNSHWRSVKVG 338
           G +  IS++DP++W  S WRS+ +G
Sbjct: 313 GVVVRISEIDPMKWPGSKWRSLLMG 337


>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
 gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
          Length = 669

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 155/399 (38%), Positives = 217/399 (54%), Gaps = 48/399 (12%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           KCL+S+LWHACAG +V +P V ++V YFPQGH+E    +           +  +P  + C
Sbjct: 6   KCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVEF-------GHFQIPALIPC 58

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEE-------QKDTFVPIELGIPSKQPTNYFCKT 130
           ++  +   AD ETDEVYA++ L PL+  +        +D    +  G  S++    F KT
Sbjct: 59  KVSAIKYMADPETDEVYAKIRLIPLNNSDLMLGHGCGEDNDDRLHSGNESQEKPASFAKT 118

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG P+RH
Sbjct: 119 LTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRH 178

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP-SSVLSSDSMHIGL 249
           LLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R       SS  +S + + G 
Sbjct: 179 LLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSGF 238

Query: 250 -------------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYV 284
                                    +  AA  AA    F   + PRAS  EF +  +  V
Sbjct: 239 FREDESKLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYYPRASTPEFCVKASA-V 297

Query: 285 KAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 343
           ++    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR ++V WDE  
Sbjct: 298 RSAIQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPD 357

Query: 344 AGERQPRVSLWEIEPLTTFPMY------PSLFPLRLKRP 376
                 RVS W +E ++  P        P    LRL +P
Sbjct: 358 LLHNVKRVSPWLVELVSNMPAIHLSPFSPPRKKLRLPQP 396


>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
          Length = 700

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 157/392 (40%), Positives = 217/392 (55%), Gaps = 47/392 (11%)

Query: 17  NKCL-NSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
            +CL + +LWHACAG +V +P V +RV YFPQGH+E      + ++ +       +P  +
Sbjct: 17  GRCLVDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-----RVPALV 71

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTA 133
           +C++  V   AD +TDEV A++ L P+ P E    D   P   G    +P + F KTLT 
Sbjct: 72  LCRVDAVRFLADPDTDEVLARVRLAPVRPNEPDHADAAAP---GAREDKPAS-FAKTLTQ 127

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+RHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 187

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMP---- 236
           TGWS FV+ KRLVAGDS++F+      L +GIRRA +             PP        
Sbjct: 188 TGWSAFVNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYG 247

Query: 237 ----SSVL---SSDSMHIGL---------LAAAAHAAATNSCFTVFFNPRASPSEFVIPL 280
               S+ L     D+   G          +  AA+ AA+   F V + PRAS  EF +  
Sbjct: 248 YAGFSTFLRGEEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCV-K 306

Query: 281 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 339
              V+A   T+   GMRF+M FETE+SS +  +MGT+  +   DP+RW NS WR ++V W
Sbjct: 307 AGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAW 366

Query: 340 DESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           DE    +   RVS W +E +++ P    L P 
Sbjct: 367 DEPDLLQNVKRVSPWLVELVSSTPAIHHLTPF 398


>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 210/389 (53%), Gaps = 52/389 (13%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL+ +LWHACAG +V +P V ++V YFPQGH+E      N          P +PP + C+
Sbjct: 17  CLDPQLWHACAGGIVQMPAVNSKVYYFPQGHAEHACGPVN------FRTCPKVPPFVPCR 70

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           +  V   AD ETDEVYA++ L PL+  +  D    +  G  ++     F KTLT SD + 
Sbjct: 71  VTAVKYRADPETDEVYAKLKLIPLNANDV-DYDRDVVGGAETQDKPASFAKTLTQSDANN 129

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
            GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGWS 
Sbjct: 130 GGGFSVPRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWST 189

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT------------------------- 233
           FV+ K+LVAGDS++F+  E   L +GIRRA +                            
Sbjct: 190 FVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWNPAGGNCHIPYGGFSP 249

Query: 234 -----------------VMPS-SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSE 275
                            + PS S++    +    ++ A++ AA    F V + PRAS  E
Sbjct: 250 FFREDDNRISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANKKPFEVVYYPRASTPE 309

Query: 276 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 334
           F +  +  V+A    R   G+RF+M FETE+SS +  +MGTI+     DP+ W NS WR 
Sbjct: 310 FCVKAS-LVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQVADPLNWPNSPWRL 368

Query: 335 VKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           ++V WDE    +   RVS W +E ++  P
Sbjct: 369 LQVTWDEPDLLQNVRRVSPWLVELVSNMP 397


>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
          Length = 705

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADSETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 237
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 238 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 268
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 269 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 327
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 328 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 595 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 650

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 793
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 651 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 700


>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
          Length = 706

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 212/396 (53%), Gaps = 59/396 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           +L +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 237
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 238 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 268
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 269 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 327
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 328 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            NS WR ++V WDE    +   R S W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRASPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 596 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 651

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 793
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 652 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 701


>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 155/386 (40%), Positives = 215/386 (55%), Gaps = 47/386 (12%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD-SHIPNYPNLPPQLI 76
           KC++S+LWHACAG +V +P V ++V YFPQGH+E     T   VD S +P  P L   ++
Sbjct: 7   KCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEH----TLMNVDFSALPRSPAL---IL 59

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI---PSKQPTNYFCKTLTA 133
           C++  V   AD ETDEVYA++ + P+  +          LG     + +  N F KTLT 
Sbjct: 60  CRVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQ 119

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFSVPR  AE +FP LD++  PP Q + A+D+H   WKFRHI+RG P+RHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHLLT 179

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------------S 237
           TGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R     P                S
Sbjct: 180 TGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFS 239

Query: 238 SVLSSDSMHIGLLAA------------------AAHAAATNSCFTVFFNPRASPSEFVIP 279
           + L  +    G L +                  AA+ A++   F V + PRA+  EF + 
Sbjct: 240 AFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYYPRANTPEFCVR 299

Query: 280 LTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVG 338
            +  V A    +   GMRF+M FETE+SS +  +MGTI+ I   DP+RW NS WR ++V 
Sbjct: 300 ASS-VNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVA 358

Query: 339 WDESTAGERQPRVSLWEIEPLTTFPM 364
           WDE    +    VS W +E ++  P+
Sbjct: 359 WDEPDLLQNVKHVSPWLVELVSNMPV 384



 Score = 42.4 bits (98), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL + L  MFG+E    D L    ++++ D    V  
Sbjct: 591 CKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLER--PDMLT---RVLYHDATGAVKH 645

Query: 753 LGDDPWEAFVSNVWYIKIL 771
            GD+P+  FV +   + IL
Sbjct: 646 TGDEPFSDFVKSAKRLTIL 664


>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
 gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 703

 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 159/403 (39%), Positives = 226/403 (56%), Gaps = 50/403 (12%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +K L+S+LWHACAG L+ LPT+ ++VVYFPQGH+E         VD      P++ P   
Sbjct: 12  DKHLDSQLWHACAGGLIQLPTINSKVVYFPQGHTEHAQGN----VDFGNARIPSIIP--- 64

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEE-----QKDTFVPIELGIPSKQPTNYFCKTL 131
           C++  +   AD ETDEV+A++ L PL+  E     + D  +  EL    K PT+ F KTL
Sbjct: 65  CRVSGIRHMADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKSQDK-PTS-FAKTL 122

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD+S++PP Q ++A+D+H   WKFRHI+RG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHGEIWKFRHIYRGTPRRHL 182

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP------------PTVMPSSV 239
           LTTGWS FV+ K+LVAGDS++F+  E   L +G+RRA R             PT   SS+
Sbjct: 183 LTTGWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGCGIDYSPGWNPTNSGSSL 242

Query: 240 LS-SDSMH--------------------IGLLAAAAHAAATNSCFTVFFNPRASPSEFVI 278
           +  SD M                     +  +  AA  AA+   F + + P A   EFV+
Sbjct: 243 VGYSDYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQSFEIVYYPCAGTPEFVV 302

Query: 279 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 337
             +  +++         MRF+M FETE+SS +  +MGT++ I   DP+RW +S WR ++V
Sbjct: 303 KASS-LRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSSIQAADPIRWPDSPWRMLQV 361

Query: 338 GWDESTAGERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHP 379
            WDE    +    V+ W +E +   P ++ S F    K+P  P
Sbjct: 362 TWDEPDLLQNVKSVNPWLVEVVVNMPAIHVSPFSPPRKKPRFP 404


>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
          Length = 705

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADSETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 237
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 238 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 268
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 269 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 327
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 328 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 595 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 650

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 793
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 651 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 700


>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
          Length = 703

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 153/395 (38%), Positives = 212/395 (53%), Gaps = 58/395 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----------------PPTV 234
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R                  P  
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGLGSDNNNNSNNPYP 236

Query: 235 MPSSVLSSDSMHIG-LLAAAAHAAATNS------------------------CFTVFFNP 269
             S  L  D +    L+    +    N                          F V + P
Sbjct: 237 GFSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 296

Query: 270 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 328
           RAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 297 RASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 355

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 390



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 16/111 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 593 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 648

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 793
           +GD+P+  F+     + I   +  ++V+K        GE G++S S  +GQ
Sbjct: 649 IGDEPFSDFMRATKRLTIKMDICGDNVRKTWITGIRNGENGIDS-STKTGQ 698


>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
 gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
          Length = 590

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 154/387 (39%), Positives = 210/387 (54%), Gaps = 55/387 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN---KEVDSHIPNYPNLPPQ 74
           KCL+S+LWHACAG +V +P + +RV YFPQGH+E      +    ++ + IP        
Sbjct: 20  KCLDSQLWHACAGGMVQMPPLNSRVFYFPQGHAEHAQGNVDFGRCQISAMIP-------- 71

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP---------IELGIPSKQPTN 125
             C++  +   AD ETDEVYA++ L PL     +D F+          +  G  S++   
Sbjct: 72  --CKVSAIKYLADPETDEVYAKIRLIPLI---DRDVFLENSGDDCDDGLYNGAESQEKPA 126

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            F KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q ++A+D+H   WKFRHI+RG
Sbjct: 127 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIYRG 186

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP---PTVMPSSVLSS 242
            P+RHLLTTGWS FV+ K+LVAGDS++F+  +   L +GIRRA R        PS   S 
Sbjct: 187 TPRRHLLTTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWNSF 246

Query: 243 DSMHIGLLAA-------------------------AAHAAATNSCFTVFFNPRASPSEFV 277
                G L                           AA  AA    F + + PRAS  EF 
Sbjct: 247 GGYAAGFLREDESKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYYPRASTPEFC 306

Query: 278 IPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVK 336
           +  +  V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR ++
Sbjct: 307 VRASA-VRAAMQIQWCPGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQ 365

Query: 337 VGWDESTAGERQPRVSLWEIEPLTTFP 363
           V WDE    +   RVS W +E +   P
Sbjct: 366 VAWDEPDLLQNVKRVSPWLVELVANMP 392



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L  MF IE    D L S   +++ D    +  
Sbjct: 507 CKVFMESEDVGRTLDLSVLGSYEELYGKLANMFEIENS--DMLSS---VLYRDAAGAIKR 561

Query: 753 LGDDPWEAFVSNVWYIKILS 772
            GD+P+  F+     + IL+
Sbjct: 562 TGDEPFSEFLKTARRLTILT 581


>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
 gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
 gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
 gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
 gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
 gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
          Length = 693

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 158/395 (40%), Positives = 215/395 (54%), Gaps = 61/395 (15%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L+ +LWHACAG +V +P++ + V YF QGH+E   A      D H P    +PP ++C
Sbjct: 5   KSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PS-------KQPTNYFC 128
           ++ +V   AD ETDEV+A++TL PL P    D      LG+  PS       K+    F 
Sbjct: 58  RVVSVKFLADAETDEVFAKITLLPL-PGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFA 116

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+
Sbjct: 117 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPR 176

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R       S   SD+ + G
Sbjct: 177 RHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGL---GSNAGSDNPYPG 233

Query: 249 LLA----------------------AAAHAAATNS-----------------CFTVFFNP 269
                                       +AAAT                    F V + P
Sbjct: 234 FSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYP 293

Query: 270 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 328
           RAS  EF +     V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 294 RASTPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 352

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 353 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 387



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 15/104 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MF IE +  D L     +V+ D    +  
Sbjct: 583 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEER-SDLLT---HVVYRDANGVIKR 638

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQK-------MGEQGVES 786
           +GD+P+  F+     + I   +  ++V+K        GE G+++
Sbjct: 639 IGDEPFSDFMKATKRLTIKMDIGGDNVRKTWITGIRTGENGIDA 682


>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 697

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 157/393 (39%), Positives = 212/393 (53%), Gaps = 56/393 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L+ +LWHACAG +V +P+V + V YF QGH+E   A      D H P    +PP ++C
Sbjct: 5   KSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNY---------- 126
           ++ +V   AD ETDEV+A++TL PL P    D      LG+ P     N           
Sbjct: 58  RVVSVKFLADAETDEVFAKITLLPL-PGNDLDLENDAVLGLTPPSSDVNVNGNGNEKPAS 116

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 117 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 176

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-----------PTVM 235
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R            P   
Sbjct: 177 PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSTGLGSDNPYPG 236

Query: 236 PSSVLSSDS-------MHIGLLAAAAHAAA-----------------TNSCFTVFFNPRA 271
            S  L  D        M +       +AAA                     F V + PRA
Sbjct: 237 FSGFLRDDETSTTSKLMMMKRNGNDGNAAAGGRVRVEAVAEAVARAACGQAFEVVYYPRA 296

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 330
           S  EF +     V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW NS
Sbjct: 297 STPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNS 355

Query: 331 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 388



 Score = 43.5 bits (101), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 15/104 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MF IE +  D L     +V+ D    +  
Sbjct: 588 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEER-SDLLT---HVVYRDANGAIKR 643

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQK-------MGEQGVES 786
           +GD+P+  F+ +   + I   +  ++V+K        GE G+++
Sbjct: 644 IGDEPFSDFMKSTKRLTIKMDIGGDNVRKTWITGIRTGENGIDA 687


>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
          Length = 702

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/400 (39%), Positives = 222/400 (55%), Gaps = 66/400 (16%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L+ +LWHACAG +V +P+V + V YF QGH+E   A      D H P    +PP ++C
Sbjct: 5   KSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PS---------KQPTNYF 127
           ++  V   AD ETDEV++++TL PL P    D      LG+ PS         ++P + F
Sbjct: 58  RVVAVKFLADAETDEVFSKITLLPL-PGNDLDLENDAVLGLTPSPDGNGPNGNEKPAS-F 115

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
            KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P
Sbjct: 116 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTP 175

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 247
           +RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R    + S+ + SD+ +I
Sbjct: 176 RRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGVGSDNNNI 233

Query: 248 ------GLL-------------------AAAAHAAA------------------TNSCFT 264
                 G L                      A+AAA                      F 
Sbjct: 234 PYPGFSGFLRDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAARGQAFE 293

Query: 265 VFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLD 323
           V + PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   D
Sbjct: 294 VVYYPRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 352

Query: 324 PVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           P+RW NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 353 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 392



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 15/104 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MF IE +  D L     +V+ D    +  
Sbjct: 592 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFCIEER-SDLLT---HVVYRDANGVIKR 647

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVES 786
           +GD+P+  F+     + I   +  ++V+K        GE G++S
Sbjct: 648 IGDEPFSDFMRATKRLTIKMDIGGDNVRKTWITGIRNGENGIDS 691


>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 155/386 (40%), Positives = 213/386 (55%), Gaps = 56/386 (14%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQ--LI 76
           L+++LWHACAG +V LP VG +VVYFPQGH EQ A+T         P +P  L P   + 
Sbjct: 27  LDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQAAST---------PEFPRTLVPNGSVP 77

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ +V   AD ETDEV+A++ LQP      +D      L  P  +    F KTLT SD 
Sbjct: 78  CRVVSVNFLADTETDEVFARICLQPEIGSSAQD-LTDDSLASPPLEKPASFAKTLTQSDA 136

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           +  GGFS+PR  AE +FP LD+ + PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGW
Sbjct: 137 NNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGW 196

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------------------- 230
           S FV+ K+LVAGD+++F+     +L +G+RR++R                          
Sbjct: 197 STFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVGDNGYALNS 256

Query: 231 --------PPTVMPSSVLSSDSMHI---GLLAAAAHAAATNSCFTVFFNPRASPSEFVIP 279
                    PT   +S  + D   +    +L AAA A +    F V + PRAS +EF + 
Sbjct: 257 SIRSENQGSPT---TSSFARDRARVTAKSVLEAAALAVSGER-FEVVYYPRASTAEFCVK 312

Query: 280 LTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVG 338
               VK         GMRF+M FETE+SS +  +MGTI  +   DPV W +S WR ++V 
Sbjct: 313 -AGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVT 371

Query: 339 WDESTAGERQPRVSLWEIEPLTTFPM 364
           WDE    +   RVS W++E + T PM
Sbjct: 372 WDEPDLLQGVNRVSPWQLELVATLPM 397


>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
          Length = 700

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 185/539 (34%), Positives = 259/539 (48%), Gaps = 96/539 (17%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPN--LPP 73
           +KCL+ +LWHACAG +V +P V ++V YFPQGH+E            H P  +P   +P 
Sbjct: 17  DKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHA--------QGHGPVEFPGGRVPA 68

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ------KDTFVPIELGIPSKQPTNYF 127
            ++C++  V   AD +TDEV+A++ L P+   EQ       D           ++    F
Sbjct: 69  LVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASF 128

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
            KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P
Sbjct: 129 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTP 188

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------- 236
           +RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA +     P           
Sbjct: 189 RRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPP 248

Query: 237 -----------SSVLSSDSMHIGLLAA----------------AAHAAATNSCFTVFFNP 269
                      S  L  D     + AA                AA+ A +   F V + P
Sbjct: 249 TPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYP 308

Query: 270 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 328
           RAS  EF +     V+A   T+   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 309 RASTPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 367

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS--- 380
           NS WR ++V WDE    +   RVS W +E ++  P    L P      +L  P +P    
Sbjct: 368 NSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAI-HLAPFSPPRKKLCVPLYPELPI 426

Query: 381 -----TSSFNDN------------RDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQ 423
                T  F+ N             D T +G+   R       L+ L+   L      Q 
Sbjct: 427 DGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLNKL------QS 480

Query: 424 RVEP-SFLGNDHNQQYQAMLAAGMQSGDPVRQQ----FMQLQQPFQYLQQSGSQNPLQL 477
            + P  F   DH  Q +  +AAG+  G P  +      + +  P    +  G + P QL
Sbjct: 481 SLSPHGFHQLDHGMQPR--IAAGLIIGHPAARDDISCLLTIGSPQNNKKSDGKKAPAQL 537


>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
 gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
          Length = 709

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 200/582 (34%), Positives = 281/582 (48%), Gaps = 112/582 (19%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L+ +LWHACAG +V +P + ++V YFPQGH+E   +    +  S IP+       ++C
Sbjct: 6   KRLDPQLWHACAGSMVQIPPINSKVFYFPQGHAEHSQSPV--DFSSRIPSL------VLC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY------FCKTL 131
           ++  V   AD ETDEVYA+++L PL P  + D    I L   S   TN       F KTL
Sbjct: 58  RVAGVKYLADSETDEVYAKISLFPL-PSNELDFGDEIGLCDTSTNGTNSTEKPTSFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------PPTVMPS------- 237
           LTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R       P +  PS       
Sbjct: 177 LTTGWSTFVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTNAS 236

Query: 238 ---------SVLSSDSMHIGL----------------LAAAAHAAATNSCFTVFFNPRAS 272
                    S+   +    GL                +  +A  AA    F V + PRAS
Sbjct: 237 CVNPYTGGFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALAANGQPFEVVYYPRAS 296

Query: 273 PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSH 331
             EF +  +  V+A    +   GMRF+M FETE+SS +  +MGTI  +   DP+RW NS 
Sbjct: 297 TPEFCVKASS-VRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPIRWPNSP 355

Query: 332 WRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS------ 380
           WR ++V WDE    +   RVS W +E ++  P+   L P      +L+ P H        
Sbjct: 356 WRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFSPPRKKLRLPQHLDFPLDGQ 414

Query: 381 --TSSFNDN-----------RDETASGLNWLRGGTGEQGLTTLNFQSL--GMFPWMQQ-- 423
               SF+ N            D T +G+   R       L+ L    L  G+F    Q  
Sbjct: 415 FQLPSFSGNPLGPSSPLCCLSDNTPAGIQGARHAQFGISLSDLQLNKLQSGLFLSSLQRF 474

Query: 424 ----RVEPSFL--GNDHNQQYQAMLAAG------MQSGDPVRQQFMQLQQPF---QYLQQ 468
               RV  SF+    + N+    +L  G       +S +  R QF+   QP    Q + +
Sbjct: 475 NSHSRVSESFMKSNTNSNENLSCLLTMGNSNTNSEKSDNVKRHQFVLFGQPILTEQQISR 534

Query: 469 SGSQNPLQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDAL 510
           S S + +     Q L ++L+S         + P++   HD L
Sbjct: 535 SCSTDAV----SQVLSKKLSS--------DESPEKAKIHDVL 564



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW--QLVFVDRENDV 750
            KV+ +S  VGR+LD+S   SY EL   L  MFGIE       RS     +++ D    +
Sbjct: 599 CKVFLESEDVGRTLDLSVLGSYEELYSRLANMFGIE-------RSEMLHHVLYRDAAGAI 651

Query: 751 LLLGDDPWEAFVSNVWYIKIL 771
              GD+P+  F      + IL
Sbjct: 652 RQTGDEPFSVFAKTAKRLTIL 672


>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
 gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
 gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
 gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 700

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 185/539 (34%), Positives = 259/539 (48%), Gaps = 96/539 (17%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPN--LPP 73
           +KCL+ +LWHACAG +V +P V ++V YFPQGH+E            H P  +P   +P 
Sbjct: 17  DKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHA--------QGHGPVEFPGGRVPA 68

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ------KDTFVPIELGIPSKQPTNYF 127
            ++C++  V   AD +TDEV+A++ L P+   EQ       D           ++    F
Sbjct: 69  LVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASF 128

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
            KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P
Sbjct: 129 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTP 188

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------- 236
           +RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA +     P           
Sbjct: 189 RRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPP 248

Query: 237 -----------SSVLSSDSMHIGLLAA----------------AAHAAATNSCFTVFFNP 269
                      S  L  D     + AA                AA+ A +   F V + P
Sbjct: 249 TPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYP 308

Query: 270 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 328
           RAS  EF +     V+A   T+   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 309 RASTPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 367

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS--- 380
           NS WR ++V WDE    +   RVS W +E ++  P    L P      +L  P +P    
Sbjct: 368 NSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAI-HLAPFSPPRKKLCVPLYPELPI 426

Query: 381 -----TSSFNDN------------RDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQ 423
                T  F+ N             D T +G+   R       L+ L+   L      Q 
Sbjct: 427 DGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLNKL------QS 480

Query: 424 RVEPSFLGN-DHNQQYQAMLAAGMQSGDPVRQQ----FMQLQQPFQYLQQSGSQNPLQL 477
            + P  L   DH  Q +  +AAG+  G P  +      + +  P    +  G + P QL
Sbjct: 481 SLSPHGLHQLDHGMQPR--IAAGLIIGHPAARDDISCLLTIGSPQNNKKSDGKKAPAQL 537


>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 595

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 160/393 (40%), Positives = 220/393 (55%), Gaps = 43/393 (10%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L+++LWHACAG +V LP VG +V+YFPQGH EQ AATT     S  P+       + C++
Sbjct: 12  LDAQLWHACAGGMVQLPQVGAKVIYFPQGHGEQ-AATTPDFSASMGPSG-----TIPCRV 65

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            +V   AD ETDEV+A+M LQP       D         P ++P + F KTLT SD +  
Sbjct: 66  VSVNFLADTETDEVFARMRLQPEGLHGLNDMTEEAPSSPPPEKPAS-FAKTLTQSDANNG 124

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGWS F
Sbjct: 125 GGFSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLTTGWSTF 184

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           V+ K+LVAGD+++F+ +   +L +G+RR++R          SS+    G+  + +  A+T
Sbjct: 185 VNQKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSN----GVSRSGSQGAST 240

Query: 260 NSCFT-------------------------VFFNPRASPSEFVIPLTKYVKAVFHTRVSV 294
            S F                          V + PRAS +EF +      +A+ HT  + 
Sbjct: 241 TSSFARNRARVTAKSVLDAAALAVAGKPFEVVYYPRASTAEFCVKAGLVKQALDHTWYA- 299

Query: 295 GMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSL 353
           GMRF+M FETE+SS +  +MGTI  +   DP+ W NS WR   V WDE    +   RVS 
Sbjct: 300 GMRFKMAFETEDSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGVSRVSP 356

Query: 354 WEIEPLTTFPMY--PSLFPLRLKRPWHPSTSSF 384
           W++E + T PM   P  +P +  R   P    F
Sbjct: 357 WQVELVATLPMQLPPFSYPKKKLRAVQPQELHF 389



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 21/140 (15%)

Query: 639 PTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQID-----QLTPTRTF 693
           PTT   F  S+DP  +S          +   C+  +S  +    Q +     +L+     
Sbjct: 469 PTTFLLFGQSIDPSSNS--------KAAQEQCVASASSSVEGYRQNEGGPWPELSIGTEH 520

Query: 694 VKVYKSGS-VGRSLDISRFSSYNELREELGQMFGI-EGKFEDPLRSGWQLVFVDRENDVL 751
            KV++ G  VGR+LD++ F SY E+ + L  MF +    F++      ++V+ D E   L
Sbjct: 521 CKVFREGDEVGRTLDLANFKSYEEVYDRLAGMFSVPAASFKN------RVVYQDGEGCTL 574

Query: 752 LLGDDPWEAFVSNVWYIKIL 771
            +G +P+  FV+ V  + IL
Sbjct: 575 PVGAEPYGNFVAAVRRLTIL 594


>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
          Length = 621

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 206/340 (60%), Gaps = 13/340 (3%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 25  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 83

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYF-CKTLTASDTSTHGG 141
               D  TDEVYAQ++L P + E      +     + +++P  YF  K LTASD S  GG
Sbjct: 84  DRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138

Query: 142 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT--GWSVF 199
             +P++ A + FP LD S     Q L+A+DL+  EW F+H+FRG P+RH+ T+  GWSVF
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
            + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
              F V + P  S S+FVI   K+V A+ +  + VG RFRM FE ++ S +RY GTI G+
Sbjct: 259 KCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDGTIIGV 315

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           +D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 316 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 354



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 4/109 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+ +KV+  G ++ R++D++    YN+L ++L ++F ++ +     R+ W++VF + E 
Sbjct: 507 TRSRIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELR--TRNQWEIVFTNNEG 564

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 797
             +L+GDDPW  F +    I I S E+++KM  +  + F P S    +S
Sbjct: 565 AEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKN-KFFQPESKALTSS 612


>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
 gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
 gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
 gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
 gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
          Length = 703

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 152/395 (38%), Positives = 212/395 (53%), Gaps = 58/395 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + L+ +LW ACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----------------PPTV 234
           LTTGWS FV+ K+L+AGDS++F+ +E  +L +GIRRA R                  P  
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNNNSNNPYP 236

Query: 235 MPSSVLSSDSMHIG-LLAAAAHAAATNS------------------------CFTVFFNP 269
             S  L  D +    L+    +    N                          F V + P
Sbjct: 237 GFSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 296

Query: 270 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 328
           RAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 297 RASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 355

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 390



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 593 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 648

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 793
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 649 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 698


>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 670

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 165/419 (39%), Positives = 228/419 (54%), Gaps = 74/419 (17%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP-- 72
           G  K L+ +LWHACAG +V +P + ++V YFPQGH+E      +         + NLP  
Sbjct: 11  GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD---------FGNLPIH 61

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--------PSKQPT 124
           P ++C++  +   AD E+DEVYA++ L PL    + D +V  E G          + + T
Sbjct: 62  PMVLCRVLAIKYMADAESDEVYAKLRLIPL----KDDEYVDHEYGDGEDSNGFESNSEKT 117

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
             F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+R
Sbjct: 118 PSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYR 177

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------- 230
           G P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R              
Sbjct: 178 GTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWN 237

Query: 231 --PPTVMPSSVLSSDSMH------------IGLLAA-----AAHAAATNSCFTVFFNPRA 271
               +   SS+L  D  +             G + A     AA  A +   F V + PRA
Sbjct: 238 PIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRA 297

Query: 272 SPSEFVIPLTKYVKAVFHTRV--SVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 328
           S SEF +   K V A    R+    GMRF+M FETE+SS +  +MGT++ ++  DP+RW 
Sbjct: 298 STSEFCV---KAVDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWP 354

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIE--------PLTTFPMYPSLFPLRLKRPWHP 379
           NS WR ++V WDE    +   RV+ W +E        PLT+F   P    +RL  P HP
Sbjct: 355 NSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS--PPRKKMRL--PQHP 409



 Score = 42.4 bits (98), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 14/94 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L  MFGI  K  + L S   +++ D    +  
Sbjct: 587 CKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGI--KKSEMLSS---VLYRDASGAIKY 641

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 786
            G++P+  F+     + IL+        EQG ES
Sbjct: 642 AGNEPFSEFLKTARRLTILT--------EQGSES 667


>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
          Length = 706

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 177/521 (33%), Positives = 258/521 (49%), Gaps = 84/521 (16%)

Query: 4   STSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDS 63
           S +G  ++G + D +CL+ +LWHACAG +V +P V ++V YFPQGH+E  A     +   
Sbjct: 7   SAAGERERGGD-DGRCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEH-AQCGGGDFPP 64

Query: 64  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ---------KDTFVPI 114
                  +P  ++C++  V   AD +TDEV+A++ L P  P EQ                
Sbjct: 65  GAGAGRGIPALVLCRVAGVHFMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAA 124

Query: 115 ELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHD 174
                +++P + F KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H 
Sbjct: 125 AGHAEAEKPAS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHG 183

Query: 175 VEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR---- 230
           V WKFRHI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA +    
Sbjct: 184 VVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIG 243

Query: 231 -----------------------------PPTVMPSSVLSSDSMHIGL----LAAAAHAA 257
                                           +M ++  +     + +    +A AA+ A
Sbjct: 244 GPELLPPPPPPPGTNYGGFSMFLRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLA 303

Query: 258 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTI 316
           A+   F V + PRAS  EF +     V+A   T+   GMRF+M FETE+SS +  +MGT+
Sbjct: 304 ASGQPFDVVYYPRASTPEFCVK-AGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTV 362

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL----- 371
           + +   DP+RW NS WR ++V WDE    +   RVS W +E ++  P    L P      
Sbjct: 363 SAVQVSDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAI-HLAPFSPPRK 421

Query: 372 RLKRPWHPS--------TSSFNDN-------------RDETASGLNWLRGGTGEQGLTTL 410
           +L  P++P            F+ N              D T +G+   R       L+ L
Sbjct: 422 KLCVPFYPELPLDGQFPAPMFHGNPLGRGGVGPMCYFPDGTPAGIQGARHAQFGISLSDL 481

Query: 411 NFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDP 451
           +   L      Q  + P  L N  +   Q  +AAG+  G P
Sbjct: 482 HLNKL------QSSLSPHGLHNQIDHGAQPRIAAGLIIGHP 516


>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
 gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
 gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 505

 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 206/340 (60%), Gaps = 13/340 (3%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 25  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 83

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYF-CKTLTASDTSTHGG 141
               D  TDEVYAQ++L P + E      +     + +++P  YF  K LTASD S  GG
Sbjct: 84  DRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138

Query: 142 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT--GWSVF 199
             +P++ A + FP LD S     Q L+A+DL+  EW F+H+FRG P+RH+ T+  GWSVF
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
            + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
              F V + P  S S+FVI   K+V A+ +  + VG RFRM FE ++ S +RY GTI G+
Sbjct: 259 KCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDGTIIGV 315

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           +D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 316 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 354


>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 697

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 159/412 (38%), Positives = 224/412 (54%), Gaps = 59/412 (14%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           EG+ K L+ +LWHACAG +V +P V ++V YFPQGH+E    T +  V          PP
Sbjct: 3   EGE-KVLDPQLWHACAGGMVQMPQVHSKVFYFPQGHAEHAHTTIDLRV----------PP 51

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPS--KQPTNYFC 128
            ++C +  V   AD ETD+V+A+++L PL   E     D+    +   PS  ++P + F 
Sbjct: 52  FILCNVEAVKFMADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSCEKPAS-FA 110

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLT SD +  GGFSVPR  AE +FP LD + +PP Q ++A+D+H   W+FRHI+RG P+
Sbjct: 111 KTLTQSDANNGGGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPR 170

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR------------------ 230
           RHLLTTGWS FV+ K+LVAGDSV+F+  E   L +GIRRA +                  
Sbjct: 171 RHLLTTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVWSSAS 230

Query: 231 PPTVMPSSVLSSDSMHI--------GLLAA-----------AAHAAATNSCFTVFFNPRA 271
              + P S    +   +        G L+            A   AA+N  F V + PRA
Sbjct: 231 GSGIGPFSFFLKEENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKAFEVVYYPRA 290

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 330
           S  EF +  +  V A    +   GMRF+M FETE+++ +  +MGTI  +  +DP+ W NS
Sbjct: 291 STPEFCVKASS-VGAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVVDPICWPNS 349

Query: 331 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM--YPSLFPLRLK-RPWHP 379
            WR ++V WDE    +   RVS W +E ++  P+  +    P R K RP HP
Sbjct: 350 PWRLLQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPFSPPRKKLRPQHP 401



 Score = 46.2 bits (108), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW--QLVFVDRENDV 750
            KV+ +S  VGR+LD+S+F SY EL   LG MFGIE       RS     +++ D    V
Sbjct: 588 CKVFLESEDVGRTLDLSQFGSYEELYRRLGNMFGIE-------RSEILNHVLYYDAAGAV 640

Query: 751 LLLGDDPWEAFVSNVWYIKILS 772
              G++P+  F+     + IL+
Sbjct: 641 KQTGEEPFSDFMKTAKRLTILT 662


>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 709

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 158/407 (38%), Positives = 222/407 (54%), Gaps = 45/407 (11%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  +CL+ +LWHACAG +V +P   +RV YFPQGH+E        E+ + +   P LP  
Sbjct: 26  GAERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANGGGAAELAAAVGPRP-LPAL 84

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIP-SKQPTNYFCK 129
           ++C +  V   AD +TDEV+A++ L P+ P E    + +   P+    P +++  + F K
Sbjct: 85  VLCCVAGVRFLADPDTDEVFAKIRLVPVGPGEAGFREPEGLGPLGSDPPEAREKLSSFAK 144

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHI+RG P+R
Sbjct: 145 TLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRR 204

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMP 236
           HLLTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P    
Sbjct: 205 HLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAPGYGG 264

Query: 237 SSVLSSD------------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVI 278
            S    D                   + I  +  AA  AA +  F V + PRAS  EFV+
Sbjct: 265 FSAFLKDEENKMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPRASTPEFVV 324

Query: 279 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 337
                ++A        GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR ++V
Sbjct: 325 KAAA-MQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPLRWPNSPWRLLQV 383

Query: 338 GWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 379
            WDE    +    VS W +E +++ P    L P      +L+ P HP
Sbjct: 384 TWDEPDLLQNVKCVSPWLVELVSSIPPI-HLGPFSPPRKKLRVPQHP 429


>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
 gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
 gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
 gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
 gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 670

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 161/415 (38%), Positives = 225/415 (54%), Gaps = 66/415 (15%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  K L+ +LWHACAG +V +P + ++V YFPQGH+E      +        N P +PP 
Sbjct: 11  GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD------FGNLP-IPPM 63

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--------PSKQPTNY 126
           ++C++  +   AD E+DEV+A++ L PL    + D +V  E G          + + T  
Sbjct: 64  VLCRVLAIKYMADAESDEVFAKLRLIPL----KDDEYVDHEYGDGEDSNGFESNSEKTPS 119

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGT 179

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR---------------- 230
           P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R                
Sbjct: 180 PRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPI 239

Query: 231 PPTVMPSSVLSSDSMH------------IGLLAA-----AAHAAATNSCFTVFFNPRASP 273
             +   SS+L  D  +             G + A     AA  A +   F V + PRAS 
Sbjct: 240 GGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRAST 299

Query: 274 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 332
           SEF +      +A        GMRF+M FETE+SS +  +MGT++ ++  DP+RW NS W
Sbjct: 300 SEFCVKALD-ARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPW 358

Query: 333 RSVKVGWDESTAGERQPRVSLWEIE--------PLTTFPMYPSLFPLRLKRPWHP 379
           R ++V WDE    +   RV+ W +E        PLT+F   P    +RL  P HP
Sbjct: 359 RLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS--PPRKKMRL--PQHP 409



 Score = 42.4 bits (98), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 14/94 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L  MFGI  K  + L S   +++ D    +  
Sbjct: 587 CKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGI--KKSEMLSS---VLYRDASGAIKY 641

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 786
            G++P+  F+     + IL+        EQG ES
Sbjct: 642 AGNEPFSEFLKTARRLTILT--------EQGSES 667


>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
          Length = 600

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 145/351 (41%), Positives = 213/351 (60%), Gaps = 19/351 (5%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G    +  +LW  CAGPL  +P +G ++ YFPQG+ E V A+T +E++   P   +LP 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPS 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F 
Sbjct: 77  KLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPL---------VNSFT 127

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS  GGF VP++ A +  P LD S   P QEL+A DLH  +W+F H +RG P+
Sbjct: 128 KVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQ 185

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGW+ F ++K+LVAGD ++F+  E  +L +GIRRA      +PSS++S +SM  G
Sbjct: 186 RHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHG 245

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           ++A+A HA      F V + P    S+F++   K++ AV + + +VG RF M FE ++ S
Sbjct: 246 VIASAKHAFDNQCMFIVVYKPSIRSSQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFS 304

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
            RRY GTI G+SD  P  W  S WR+++V WDE  +  R  +VS WEIE L
Sbjct: 305 ERRYFGTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL 354



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)

Query: 604 SYNGKDAAVGTENCNTDS-QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 662
           +YN +      EN  T +  N  +FGV      L+ P+ +      +   +S +  G   
Sbjct: 436 NYNNQMVTQIEENITTKTGTNFRLFGV-----SLVTPSVIKDPIEEIGSEISKLTEGKK- 489

Query: 663 FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREEL 721
           F  S    ++  +E+     Q  Q + TRT  KV   G ++ R++D+S  + Y++L  EL
Sbjct: 490 FGQSQ--TLRSPTEI-----QSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILEL 542

Query: 722 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 771
            ++F ++G+ +   R+ W++ F D ++D +L+GDDPW  F + V  I I 
Sbjct: 543 EELFDLKGQLQT--RNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 590


>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 171/478 (35%), Positives = 237/478 (49%), Gaps = 81/478 (16%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           EGD +CL+ +LWHACAG +V +P V  +V YFPQGH+E      +        N P +P 
Sbjct: 13  EGD-RCLDPQLWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPVD------FRNCPRVPA 65

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQPTNYFCKTL 131
            ++C++  +   AD  TDEVYA++ L PL+  E   +D  +    G  +      F KTL
Sbjct: 66  HILCRVAAIKFMADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPDKPASFAKTL 125

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHL
Sbjct: 126 TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHL 185

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-------------------- 231
           LTTG S FV+ K+LV+GDS++F+  E   L +GIRRA R                     
Sbjct: 186 LTTGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMGGNCTV 245

Query: 232 PTVMPSSVLSSDSMHI------------GLLAA-----------AAHAAATNSCFTVFFN 268
           P    S+ L  D   +            G L             AA  AA    F V + 
Sbjct: 246 PYGGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVYY 305

Query: 269 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 327
           PRAS  EF +  +  VKA    R   GMRF+M FETE+SS +  +MGTI+ +   +P+RW
Sbjct: 306 PRASTPEFCVKAS-LVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQVAEPLRW 364

Query: 328 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS-- 380
             S WR ++V WDE    +   RVS W +E ++  P    L P      +++ P HP   
Sbjct: 365 PESPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAI-HLTPFSPPRKKMRLPQHPDFP 423

Query: 381 -----------------TSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL--GMFP 419
                            +S F    D+T +G+   R       L+ ++   L  G+FP
Sbjct: 424 FEGQLPMPTFSGNLLGPSSPFGCLPDKTPAGMQGARHAHYGLSLSDMHLNKLHTGLFP 481


>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
 gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
          Length = 653

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 161/415 (38%), Positives = 225/415 (54%), Gaps = 66/415 (15%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  K L+ +LWHACAG +V +P + ++V YFPQGH+E      +        N P +PP 
Sbjct: 11  GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD------FGNLP-IPPM 63

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--------PSKQPTNY 126
           ++C++  +   AD E+DEV+A++ L PL    + D +V  E G          + + T  
Sbjct: 64  VLCRVLAIKYMADAESDEVFAKLRLIPL----KDDEYVDHEYGDGEDSNGFESNSEKTPS 119

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGT 179

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR---------------- 230
           P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R                
Sbjct: 180 PRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPI 239

Query: 231 PPTVMPSSVLSSDSMH------------IGLLAA-----AAHAAATNSCFTVFFNPRASP 273
             +   SS+L  D  +             G + A     AA  A +   F V + PRAS 
Sbjct: 240 GGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRAST 299

Query: 274 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 332
           SEF +      +A        GMRF+M FETE+SS +  +MGT++ ++  DP+RW NS W
Sbjct: 300 SEFCVKALD-ARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPW 358

Query: 333 RSVKVGWDESTAGERQPRVSLWEIE--------PLTTFPMYPSLFPLRLKRPWHP 379
           R ++V WDE    +   RV+ W +E        PLT+F   P    +RL  P HP
Sbjct: 359 RLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS--PPRKKMRL--PQHP 409


>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
          Length = 297

 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 146/290 (50%), Positives = 198/290 (68%), Gaps = 21/290 (7%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 78
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LPP+++C 
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLF-VLPPKILCN 67

Query: 79  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           + NV++ A+ +TDEVYAQ+TL        +P+SP+       P EL  P     + F K 
Sbjct: 68  VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPS-----PPELQRPK---VHSFSKV 119

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FV++KRLVAGD+ +F+  E  +L +G+RRA    + MPSSV+SS SMH+G+L
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           A A HA  T + F V++ PR   S+F+I L KY++A+   + SVGMRF+M
Sbjct: 240 ATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKM 286


>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
          Length = 417

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/341 (42%), Positives = 201/341 (58%), Gaps = 32/341 (9%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +K L+ +LWHACAGP+V +P + ++V YFPQGH+E   A  +       P+ P +P  ++
Sbjct: 5   DKSLDPQLWHACAGPMVQIPPLNSKVFYFPQGHAEHSLAAVD------FPSSPPVPALVL 58

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ ++   AD ETDEVYA++ L PL   E     V +     +++P + F KTLT SD 
Sbjct: 59  CRVASLKFMADTETDEVYAKILLMPLPNTELDLEHVAVFGSDNAEKPAS-FAKTLTQSDA 117

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           +  GGFSVPR  AE +FP LD++  PP Q ++A D+H   WKFRHI+RG P+RHLLTTGW
Sbjct: 118 NNGGGFSVPRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLLTTGW 177

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS------SVLSSDSMHI--- 247
           S FV+ K+LVAGDS++F+ +E   L +GIRRA R     P       S L  D   +   
Sbjct: 178 STFVNHKKLVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDESKMMMM 237

Query: 248 ---------GLLAA-----AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVS 293
                    G L A     AA  AA+   F V + PRAS  EF +  +  VKA       
Sbjct: 238 NRNGDWRGKGKLKAEAVLQAATLAASGQPFEVVYYPRASTPEFCVKASS-VKAAMRVPWC 296

Query: 294 VGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 333
            GMRF+M FETE+SS +  +MGT++ +  +DP+RW NS WR
Sbjct: 297 CGMRFKMAFETEDSSRISWFMGTVSSVQVVDPIRWPNSPWR 337


>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
 gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
 gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
 gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
          Length = 598

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/351 (41%), Positives = 215/351 (61%), Gaps = 21/351 (5%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G    +  +LW  CAGPL  +P +G ++ YFPQG+ E V A+T +E++   P   +LP 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPS 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F 
Sbjct: 77  KLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPL---------VNSFT 127

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS  GGF VP++ A +  P LD S   P QEL+A DLH  +W+F H +RG P+
Sbjct: 128 KVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQ 185

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHLLTTGW+ F ++K+LVAGD ++F+  E  +L +GIRRA      +PSS++S +SM  G
Sbjct: 186 RHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHG 245

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           ++A+A HA      F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S
Sbjct: 246 VIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFS 302

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
            RRY GTI G+SD  P  W  S WR+++V WDE  +  R  +VS WEIE L
Sbjct: 303 ERRYFGTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL 352



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)

Query: 604 SYNGKDAAVGTENCNTDS-QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 662
           +YN +      EN  T +  N  +FGV      L+ P+ +      +   +S +  G   
Sbjct: 434 NYNNQMVTQIEENITTKTGTNFRLFGV-----SLVTPSVIKDPIEEIGSEISKLTEGKK- 487

Query: 663 FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREEL 721
           F  S    ++  +E+     Q  Q + TRT  KV   G ++ R++D+S  + Y++L  EL
Sbjct: 488 FGQSQ--TLRSPTEI-----QSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILEL 540

Query: 722 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 771
            ++F ++G+ +   R+ W++ F D ++D +L+GDDPW  F + V  I I 
Sbjct: 541 EELFDLKGQLQT--RNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 588


>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
 gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 716

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/461 (36%), Positives = 232/461 (50%), Gaps = 77/461 (16%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L+ +LWHACAG +V +P + ++V YFPQGH+E   AT +      IP      P + C
Sbjct: 6   KILDPQLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLRIP------PLIPC 59

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           ++  V   AD+ETDEV+A + + PL      D     E G  S    N       F KTL
Sbjct: 60  RVLAVKFLADLETDEVFANVRMVPL---PNSDLNFEEEGGFGSSGSENNMEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++  PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------------P 231
           LTTGWS FV+ K+LVAGDS++F+ ++   L +GIRRA R                    P
Sbjct: 177 LTTGWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCASDHPYGWNPGGGNCIP 236

Query: 232 PTVMPSSVLSSDSMHIGL-----------------------LAAAAHAAATNSCFTVFFN 268
           P    +  L  D   +                         +  AA  AA+   F V + 
Sbjct: 237 PYGGLTMFLRDDDNKLSRKGSLSSSGSGGNLRGKGKVRPESVMEAAALAASGQPFEVVYY 296

Query: 269 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 327
           PRAS  EF +  +  V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW
Sbjct: 297 PRASTPEFCVKASS-VRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRW 355

Query: 328 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS-- 380
            NS WR ++V WDE    +   RVS W +E ++  P+   L P      + + P HP   
Sbjct: 356 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-QLSPFSPPRKKFRLPQHPDFP 414

Query: 381 -------TSSFNDNRDETASGLNWLRGGT--GEQGLTTLNF 412
                  +SSF+ N    +S +  L   T  G QG     F
Sbjct: 415 LDSQFPLSSSFSSNTLRPSSPMCCLSDNTSVGIQGARHTQF 455



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+L++S  SSY EL   L  MFG+E    D L     +++ D    V  
Sbjct: 607 CKVFMESEDVGRTLNLSVISSYEELYRRLANMFGMEK--PDILS---HVLYQDATGAVKQ 661

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
            GD P+  F+     + IL+     K+G 
Sbjct: 662 AGDKPFSDFIKTARRLTILTDSGSDKLGR 690


>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
 gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
          Length = 708

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/392 (40%), Positives = 212/392 (54%), Gaps = 54/392 (13%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           D K L+ +LW ACAG +V +P + T+V YFPQGH+E     +   VD     +P   P L
Sbjct: 5   DKKSLDPQLWQACAGSMVQIPPLNTKVFYFPQGHAEH----SQSPVD-----FPQRIPSL 55

Query: 76  I-CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-----FCK 129
           + C++ +V   AD  TDEV+A+++L PL P+   D    +++        N      F K
Sbjct: 56  VLCRVASVKFLADPGTDEVFAKISLVPL-PDADLDISQDVDICGDGNDSNNAEKPASFAK 114

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLT SD +  GGFSVPR  AE +FP LD+S  PP Q LIA+D+H   WKFRHI+RG P+R
Sbjct: 115 TLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYRGTPRR 174

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR------PPTVMPSSV---- 239
           HLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R       P   PS +    
Sbjct: 175 HLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGVGIGSGPESSPSHIGWNS 234

Query: 240 ---------------LSSDSMHIGLLAA-----------AAHAAATNSCFTVFFNPRASP 273
                          +  D M  G +             AA  AA  + F V + PRAS 
Sbjct: 235 NNATSANPYGGFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLAANGNPFQVVYYPRAST 294

Query: 274 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 332
            EF +  +  V+A   T    GMRF+M FETE+SS +  +MGT+  +   DP RW NS W
Sbjct: 295 PEFCVKASS-VRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVASVQVADPDRWPNSPW 353

Query: 333 RSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
           R ++V WDE    +    VS W +E ++  P+
Sbjct: 354 RLLQVTWDEPDLLQTVKCVSPWLVELVSNMPV 385



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 698 KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDP 757
           +S  +GR+LD+S   SY ELR +L  MFGIE    D L     +++ D    V  +GD+P
Sbjct: 602 ESEDLGRTLDLSALHSYEELRRKLAIMFGIER--SDMLS---HVLYRDVTGAVKQIGDEP 656

Query: 758 WEAFVSNVWYIKIL 771
           +  F+     + IL
Sbjct: 657 FSVFMKTAKRLTIL 670


>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
 gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
          Length = 716

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/393 (38%), Positives = 208/393 (52%), Gaps = 54/393 (13%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           ++CL+ +LWHACAG +V +P V ++V YFPQGH+E      +            +P  ++
Sbjct: 8   DRCLDPQLWHACAGGMVQMPAVHSKVYYFPQGHAEHAQGPVDLPAG-------RVPALVL 60

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIPSKQPTNYFCKTLT 132
           C++  V   AD +TDEV+A++ L P+ P E              G    +P + F KTLT
Sbjct: 61  CRVAAVRFMADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQEDKPAS-FAKTLT 119

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
            SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+RHLL
Sbjct: 120 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 179

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA----IRPPTVMPSSVLSSDSMHIG 248
           TTGWS FV+ K+LVAGDS++F+  E   L +GIRRA    I  P  M            G
Sbjct: 180 TTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHHHHQQPPPPQGG 239

Query: 249 LLAA------------------------------------AAHAAATNSCFTVFFNPRAS 272
             A                                     AA+ A +   F V + PRAS
Sbjct: 240 GYAGFSMFLRGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVSGQPFEVVYYPRAS 299

Query: 273 PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSH 331
             EF +     V+A   T+   GMRF+M FETE+SS +  +MGT++ +   DP+RW NS 
Sbjct: 300 TPEFCVK-AGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHVADPIRWPNSP 358

Query: 332 WRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
           WR ++V WDE    +   RVS W +E ++  P+
Sbjct: 359 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPV 391



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 11/136 (8%)

Query: 641 TVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVY-KS 699
           TVS+   S  PG S+     SG   +   C Q+        G  D L       KV+ +S
Sbjct: 583 TVSNSDVS-SPGRSNQDGTSSGGGPAARACWQEEECNNRAAGSEDDLL---GHCKVFMQS 638

Query: 700 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL-GDDPW 758
             VGR+LD+S  +SY EL + L  MFG+     D       + + D  +  L   GD+P+
Sbjct: 639 EDVGRTLDLSAVASYEELYQRLADMFGV-----DKAELTSHVFYRDDASGALKHPGDEPF 693

Query: 759 EAFVSNVWYIKILSPE 774
             F      + IL+ E
Sbjct: 694 SEFTKTARRLTILTDE 709


>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
 gi|223942161|gb|ACN25164.1| unknown [Zea mays]
 gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
 gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
          Length = 681

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/404 (38%), Positives = 219/404 (54%), Gaps = 46/404 (11%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
            + +CL+ +LWHACAG +V +P V +RV YFPQGH+E        ++         LP  
Sbjct: 5   AEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR----ALPSL 60

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTL 131
           ++C +  V   AD ETDEV+A++ L P++P E  +   P E  +    +++  + F KTL
Sbjct: 61  VLCSVTGVRFLADPETDEVFAKIRLVPVAPGEV-EFREPDEFSVDPADAREKLSSFAKTL 119

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHI+RG P+RHL
Sbjct: 120 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHL 179

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 237
           LTTGWS FV+ K+LVAGDS++F+  E  +L +GIRR  R              P     S
Sbjct: 180 LTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALS 239

Query: 238 SVLSSD----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLT 281
           + L  +                 + I  +  AA  AA+   F V + PRAS  EFV+   
Sbjct: 240 AFLKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKAA 299

Query: 282 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWD 340
             V+     +   GMRF+M FETE+SS +  +MGTI      DP+RW NS WR ++V WD
Sbjct: 300 S-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVAWD 358

Query: 341 ESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 379
           E    +    V+ W +E +++ P    L P      +L+ P HP
Sbjct: 359 EPDLLQNVKCVNPWLVEIVSSIPPI-HLGPFSPPRKKLRVPHHP 401


>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
 gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
          Length = 698

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/409 (37%), Positives = 221/409 (54%), Gaps = 48/409 (11%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           +CL+ +LWHACAG +V +P   +RV YF QGH+E           +       LPP ++C
Sbjct: 11  RCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLC 70

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPI----ELGIPSKQPTNYFCK 129
           ++  V   AD ++DEVYA++ L P++P E    + D   P+    +   PS +    F K
Sbjct: 71  RVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAK 130

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H V WKFRHI+RG P+R
Sbjct: 131 TLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRR 190

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT----VMP--------- 236
           HLLTTGWS FV+ K+LVAGDS++F+     +L +GIRRA R        M          
Sbjct: 191 HLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGG 250

Query: 237 ---SSVLSSDS------------------MHIGLLAAAAHAAATNSCFTVFFNPRASPSE 275
              S+ L  +                   + +  +  AA  A++   F V + PRAS  +
Sbjct: 251 GGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPD 310

Query: 276 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 334
           FV+     V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP RW NS WR 
Sbjct: 311 FVVKAAS-VQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRL 369

Query: 335 VKVGWDESTAGERQPRVSLWEIEPLTTFP---MYPSLFPL-RLKRPWHP 379
           ++V WDE    +    VS W +E +++ P   + P   P  +L+ P HP
Sbjct: 370 LQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHP 418


>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
 gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
          Length = 709

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/405 (37%), Positives = 215/405 (53%), Gaps = 58/405 (14%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           ++CL+ +LWHACAG +V +P V ++V YFPQGH+E         VD      P L   ++
Sbjct: 17  DRCLDPQLWHACAGGMVQMPPVHSKVYYFPQGHAEHAQGPV---VDLPAGRVPAL---VL 70

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEE--------QKDTFVPIELGIPSKQPTNYFC 128
           C++  V   AD +TDEV+A++ L P+ P E                  G    +P + F 
Sbjct: 71  CRVAAVRFMADPDTDEVFAKIRLAPVRPNEPGYAADADDAIGAAAAGGGAQEDKPAS-FA 129

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+
Sbjct: 130 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPR 189

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP------------ 236
           RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA +     P            
Sbjct: 190 RHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFLHHHQPPPPP 249

Query: 237 -------------------SSVLSSDSMHIG----------LLAAAAHAAATNSCFTVFF 267
                              S ++++ +   G           +  AA+ A +   F V +
Sbjct: 250 GGGGYAGFSMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVVEAANLAVSGQPFEVVY 309

Query: 268 NPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVR 326
            PRAS  EF +     V+A   T+   GMRF+M FETE+SS +  +MGT++ +   DP+R
Sbjct: 310 YPRASTPEFCVK-AGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIR 368

Query: 327 WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           W NS WR ++V WDE    +   RVS W +E ++  P    L P 
Sbjct: 369 WPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHHLTPF 413


>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
 gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
          Length = 700

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 223/422 (52%), Gaps = 67/422 (15%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP- 72
           E  +KCL+S+LWHACAG +V +P V ++V YFPQGH+E      +         + NLP 
Sbjct: 13  EEADKCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVD---------FRNLPG 63

Query: 73  -PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPI----ELGIPSKQPTN 125
               +C++  +   AD ETDEV+A++ L P++  E    D  V +    E    +K+P +
Sbjct: 64  ASHTLCRVSAIKFMADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPVS 123

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            F KTLT SD +  GGFSVPR  AE +FP LD++  PP Q L+A+D+H   WKFRHI+RG
Sbjct: 124 -FAKTLTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRG 182

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV------ 239
            P+RHLLTTGWS FV+ K+LVAGDSV+F+  E   L +G+RRA R  +  P S+      
Sbjct: 183 TPRRHLLTTGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALG 242

Query: 240 -----------LSSDSMHIGL--------------------------LAAAAHAAATNSC 262
                       S +  H  +                          +  AA  AA    
Sbjct: 243 NLVVPYGGFGAFSREDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLP 302

Query: 263 FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 321
           F   + PRA+  EF +  +  VK V   R   GMRF+M FETE+SS +  +MGT+  + D
Sbjct: 303 FETVYYPRANTPEFFVKAS-LVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQD 361

Query: 322 LDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE---PLTTFPMYPSLFPL-RLKRPW 377
            DP+ W  S WR ++V WDE    +   RVS W +E    ++   + P   P  +L+ P 
Sbjct: 362 ADPLCWPGSPWRLLQVTWDEPDLLQNVKRVSPWLVELASHMSAIHLSPFSSPRKKLRLPQ 421

Query: 378 HP 379
           HP
Sbjct: 422 HP 423


>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
           Japonica Group]
 gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
          Length = 760

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 224/417 (53%), Gaps = 48/417 (11%)

Query: 10  QQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP 69
           + G   + +CL+ +LWHACAG +V +P   +RV YF QGH+E           +      
Sbjct: 65  EVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPR 124

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPI----ELGIPSK 121
            LPP ++C++  V   AD ++DEVYA++ L P++P E    + D   P+    +   PS 
Sbjct: 125 ALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSP 184

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           +    F KTLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H V WKFRH
Sbjct: 185 EKPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRH 244

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT----VMP- 236
           I+RG P+RHLLTTGWS FV+ K+LVAGDS++F+     +L +GIRRA R        M  
Sbjct: 245 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSG 304

Query: 237 -----------SSVLSSDS------------------MHIGLLAAAAHAAATNSCFTVFF 267
                      S+ L  +                   + +  +  AA  A++   F V +
Sbjct: 305 WNAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAY 364

Query: 268 NPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVR 326
            PRAS  +FV+     V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP R
Sbjct: 365 YPRASTPDFVVKAAS-VQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNR 423

Query: 327 WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP---MYPSLFPL-RLKRPWHP 379
           W NS WR ++V WDE    +    VS W +E +++ P   + P   P  +L+ P HP
Sbjct: 424 WPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHP 480


>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
          Length = 690

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/389 (38%), Positives = 212/389 (54%), Gaps = 44/389 (11%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           +CL+ +LWHACAG +V +P   +RV YF QGH+E           +       LPP ++C
Sbjct: 31  RCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLC 90

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPI----ELGIPSKQPTNYFCK 129
           ++  V   AD ++DEVYA++ L P++P E    + D   P+    +   PS +    F K
Sbjct: 91  RVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAK 150

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H V WKFRHI+RG P+R
Sbjct: 151 TLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRR 210

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT----VMP--------- 236
           HLLTTGWS FV+ K+LVAGDS++F+     +L +GIRRA R        M          
Sbjct: 211 HLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGG 270

Query: 237 ---SSVLSSDS------------------MHIGLLAAAAHAAATNSCFTVFFNPRASPSE 275
              S+ L  +                   + +  +  AA  A++   F V + PRAS  +
Sbjct: 271 GGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPD 330

Query: 276 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 334
           FV+     V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP RW NS WR 
Sbjct: 331 FVVKAAS-VQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRL 389

Query: 335 VKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           ++V WDE    +    VS W +E +++ P
Sbjct: 390 LQVTWDEPDLLQNVKCVSPWLVELVSSIP 418


>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
          Length = 658

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 14/279 (5%)

Query: 90  TDEVYAQMTLQPLSPEEQK-----------DTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           TDEVYAQ++L   + E ++           D      +  P++ P + FCKTLTASDTST
Sbjct: 40  TDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIP-HMFCKTLTASDTST 98

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSVPRRAAE  FP LD+SLQ P QEL+A+DLH  EW+FRHI+RGQP+RHLLTTGWS 
Sbjct: 99  HGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSG 158

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           F++ K+LV+GD+VLF+  E  +L LG+RRA +     P   L +   +   L+  AHA A
Sbjct: 159 FINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVA 218

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
             S F +++NPR S SEF+IP  K++++ F    SVGMRF++ +E+E++S RR  G I G
Sbjct: 219 VKSIFHIYYNPRLSQSEFIIPYWKFMRS-FSQPFSVGMRFKLRYESEDASERRRTGIIIG 277

Query: 319 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
             + DP+ W  S W+ + V WD+     R   VS WEIE
Sbjct: 278 SREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIE 315


>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
          Length = 701

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 212/393 (53%), Gaps = 56/393 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L+ +LWHACAG +V +P++ + V YF QGH+E   A      D H P    +PP ++C
Sbjct: 5   KSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PS-------KQPTNYFC 128
           ++ +V   AD ETDEV+A++TL PL P    D      LG+  PS       K+    F 
Sbjct: 58  RVVSVKFLADAETDEVFAKITLLPL-PGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFA 116

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q + A+D+H   WKFRHI+RG P+
Sbjct: 117 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIYRGTPR 176

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR------------------ 230
           RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R                  
Sbjct: 177 RHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSG 236

Query: 231 -----PPTVMPSSVL--------SSDSMHIGLLAAAAHAAATNSC------FTVFFNPRA 271
                  T   S ++          ++   G +   A A +  +C      F V + PRA
Sbjct: 237 FLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFEVVYYPRA 296

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 330
           S  EF +     V++        GMR +M FETE+SS +  +MGT + +   DP+RW NS
Sbjct: 297 STPEFCVKAAD-VRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAVQVADPIRWPNS 355

Query: 331 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            WR ++V WDE    +   RVS W +  ++  P
Sbjct: 356 PWRLLQVAWDEPDLXQNVKRVSPWLVXLVSNMP 388


>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
          Length = 679

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 160/376 (42%), Positives = 210/376 (55%), Gaps = 87/376 (23%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           CL  ELWHACAGP++ LP  G+ VVYFPQGH E V        D  +   PN+PP + C+
Sbjct: 42  CL--ELWHACAGPMICLPKKGSVVVYFPQGHLELVQ-------DLQLL-LPNIPPHVFCR 91

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKD-----------TFVPIELGIPSKQPTNYF 127
           + +V +HA+  +DEVY Q+ L P S + Q+                 E  + S  P + F
Sbjct: 92  VVDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSSTP-HMF 150

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG-- 185
           CKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+RG  
Sbjct: 151 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGVS 210

Query: 186 ------QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 239
                 QP+RHLLTTGWS FV               N+K                    +
Sbjct: 211 LMSHVWQPRRHLLTTGWSGFV---------------NKKK-------------------L 236

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +S D++                   +F   RAS SEF++P+ K++K++ ++  S GMRFR
Sbjct: 237 VSGDAV-------------------LFL--RASSSEFIVPIHKFLKSLDYS-YSAGMRFR 274

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           M FET++++ RR  G I GI+D+DPVRW  S W+ + V WD+  A  R  RVS WEIEP 
Sbjct: 275 MRFETDDAAERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDDLEA-TRNNRVSPWEIEPS 333

Query: 360 TTFPMYPSLFPLRLKR 375
            +  +  +L    LKR
Sbjct: 334 GSASIPNNLMAASLKR 349


>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 514

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 128/249 (51%), Positives = 172/249 (69%), Gaps = 4/249 (1%)

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           P+K   + F K LTASDTSTHGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+
Sbjct: 29  PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 88

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 238
           F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+  E   L +G+RR  +  + MP+S
Sbjct: 89  FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPAS 148

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
           V+SS SM +G+LA A+HA  T + F VF+ PR   S+F+I + KY+ A+     S+GMR+
Sbjct: 149 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRY 205

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           RM FE EES  R + GTI G  DL   +W  S WRS+++ WDE ++ +R  +VS WEIEP
Sbjct: 206 RMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP 264

Query: 359 LTTFPMYPS 367
            +   + P+
Sbjct: 265 FSPSALTPT 273



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 374 DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 431

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 778
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F      + I   ++V+K
Sbjct: 432 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 489

Query: 779 M 779
           M
Sbjct: 490 M 490


>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
          Length = 680

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/409 (37%), Positives = 213/409 (52%), Gaps = 70/409 (17%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +KCL+ +LWHACAG +V +P++ +RVVYFPQGH+E      +          P +PP ++
Sbjct: 5   DKCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-------GNPRIPPLVL 57

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPL--SPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           C++  V   AD E+DEVYA++ L PL  +  E +D  +    GI + +    F KTLT S
Sbjct: 58  CRVSAVKYLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPEKPASFAKTLTQS 117

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   W+FRHI+RG P+RHLLTT
Sbjct: 118 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTT 177

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-------------------PTVM 235
           GWS FV+ K LVAGDS++F+  E   L +GIRRA R                    P   
Sbjct: 178 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRG 237

Query: 236 PSSVLSSDSMHIGL-----------------LAAAAHAAATNSCFTVFFNPRASPSEFVI 278
            S  L  D     L                 +A AA  AA    F + + PRAS  EF +
Sbjct: 238 YSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCV 297

Query: 279 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR---- 333
             +  V+A    +   GM+F+M FET++SS +  +MG I+ +   DP+RW NS WR    
Sbjct: 298 KASS-VRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQV 356

Query: 334 -------------------SVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
                               ++V WDE    +   RV+ W +E ++  P
Sbjct: 357 LEYEIQKIVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVELVSHVP 405


>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
          Length = 703

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/395 (37%), Positives = 210/395 (53%), Gaps = 58/395 (14%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           + L+ +LW ACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 131
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H    KFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYRGTPRRHL 176

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----------------PPTV 234
           LTTGWS FV+ K+L+AGDS++F+ +E  +L +GIRRA R                  P  
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNNNSNNPYP 236

Query: 235 MPSSVLSSDSMHIG-LLAAAAHAAATNS------------------------CFTVFFNP 269
             S  L  D +    L+    +    N                          F V + P
Sbjct: 237 GFSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 296

Query: 270 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES-SVRRYMGTITGISDLDPVRWS 328
           RAS  EF +  +  V++    R   GMRF+M FETE+S  +  +MGT++ +   DP+RW 
Sbjct: 297 RASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVSAVQVADPIRWP 355

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
           NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 390



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 593 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 648

Query: 753 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 793
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 649 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 698


>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
 gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
          Length = 690

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 190/550 (34%), Positives = 263/550 (47%), Gaps = 101/550 (18%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           E + K L+ +LW ACAG +V +P + + V YFPQGH+E   +  N         +P   P
Sbjct: 3   ETEKKSLDPQLWQACAGSMVHIPPLNSTVFYFPQGHAEHSQSPVN---------FPQRIP 53

Query: 74  QLI-CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--------GIPSKQPT 124
            LI C++  V   AD +TDEVYA++   PL P    D      L          P K  +
Sbjct: 54  SLILCRVATVKFLADPDTDEVYAKIGFVPL-PNTDLDFAHDRGLCGNGNDGDSCPDKPAS 112

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
             F KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q +IA+D+H   WKFRHI+R
Sbjct: 113 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYR 170

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTV--MPSSVLSS 242
           G P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRR+ R   +   P S L++
Sbjct: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTT 230

Query: 243 ----------------------DSMHIGLLAA-----------AAHAAATNSCFTVFFNP 269
                                 D M  G +             AA  AA    F V + P
Sbjct: 231 GWNSNNATCAIPYDGFSLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKPFQVVYYP 290

Query: 270 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 328
           R+S  EF +  +  V+A        GMRF+M FETE+SS +  +MGT+T +   DPVRW 
Sbjct: 291 RSSTPEFCVKASS-VRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVTSVQVADPVRWP 349

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM--------------YPSL--FPLR 372
           NS WR ++V WDE    +   RVS W +E ++  P+              +P    FPL 
Sbjct: 350 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRKKSRFPQQLGFPLD 409

Query: 373 LK--------RPWHPST--SSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQ 422
           L+         P  PS+     +DN      G    + G     +   N Q  GMF    
Sbjct: 410 LQFQLPSFSGNPLGPSSPMCCLSDNTPAGIQGARHAQFGISLSDIQFNNKQQSGMFLSSL 469

Query: 423 QRVEP------SFLG--NDHNQQYQAMLAAG-----MQSGDPVRQ-QFMQLQQPF---QY 465
           QR  P      ++L    + N+    +L  G     ++  D V++ QF+   QP    Q+
Sbjct: 470 QRFNPHSRNSETYLTGHTNSNENISCLLTMGNSNPNLEKSDNVKKHQFLLFGQPILIEQH 529

Query: 466 LQQSGSQNPL 475
           +  S S + +
Sbjct: 530 ISHSCSTDAV 539



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 9/95 (9%)

Query: 678 LHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 736
           LHN  +I + T P + F++   S  VG +LD+S   SY EL  +L  MFGIE      + 
Sbjct: 586 LHNTSEIGKDTGPCKVFLE---SEDVGWTLDLSALCSYEELHGKLANMFGIE---RSEMS 639

Query: 737 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 771
           S   +++ D    V  +GD+P+  F+     + IL
Sbjct: 640 S--HVLYRDATGSVKQIGDEPFSVFMKTAKRLTIL 672


>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
          Length = 711

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 154/413 (37%), Positives = 219/413 (53%), Gaps = 36/413 (8%)

Query: 3   LSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD 62
           ++ + L +    G  +C++ +LW ACAG + ++P VG  V YFPQGH+E          D
Sbjct: 2   ITFADLTEPAAAGAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGA-AD 60

Query: 63  SHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE---LGIP 119
                 P L P   C++  V   AD +TDEV+A++ L PL   +       +E       
Sbjct: 61  LSAARVPALVP---CRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAAD 117

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
            ++    F KTLT SD +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKF
Sbjct: 118 EQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKF 177

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--- 236
           RHI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+  +   L +GIRRA R         
Sbjct: 178 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGG 237

Query: 237 --SSVLSSDSMHIGLL------AAAAHA---------------AATNSCFTVFFNPRASP 273
              S  +    + GL+       AAA A               AA    F V + PRAS 
Sbjct: 238 GDDSPAAGWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRAST 297

Query: 274 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 332
            EF +     V+     + S GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S W
Sbjct: 298 PEFCV-RAAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPW 356

Query: 333 RSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 384
           R ++V WDE    +   RVS W +E +++ P ++ + F    K+P  P+   F
Sbjct: 357 RLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRIPAYPEF 409


>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
 gi|194699576|gb|ACF83872.1| unknown [Zea mays]
 gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
          Length = 373

 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 149/357 (41%), Positives = 198/357 (55%), Gaps = 37/357 (10%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ +CL+ +LWHACAG +V +P V +RV YFPQGH+E  A       D        LPP 
Sbjct: 5   GEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEH-AHGGGGATDLAGARARPLPPL 63

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTL 131
           ++C +  V   AD ETDEV+A++ L P +P E  +   P E GI    +++  + F KTL
Sbjct: 64  VLCTVAGVRFLADPETDEVFAKIRLVPAAPGEV-EFGEPREFGIDPEDAREKLSSFAKTL 122

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHIFRG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHL 182

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMPSS 238
           LTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P     S
Sbjct: 183 LTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALS 242

Query: 239 VLSSD-----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLT 281
               D                  + I  +  AA  AA+   F V + PRAS  EFV+   
Sbjct: 243 AFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAA 302

Query: 282 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 337
             V+     +   GMRF+M FETE+SS +  +MGTI      D +RW NS WR ++V
Sbjct: 303 S-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLLQV 358


>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
          Length = 689

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 154/413 (37%), Positives = 219/413 (53%), Gaps = 36/413 (8%)

Query: 3   LSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD 62
           ++ + L +    G  +C++ +LW ACAG + ++P VG  V YFPQGH+E          D
Sbjct: 2   ITFADLTEPAAAGAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGA-AD 60

Query: 63  SHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE---LGIP 119
                 P L P   C++  V   AD +TDEV+A++ L PL   +       +E       
Sbjct: 61  LSAARVPALVP---CRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAAD 117

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
            ++    F KTLT SD +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKF
Sbjct: 118 EQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKF 177

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--- 236
           RHI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+  +   L +GIRRA R         
Sbjct: 178 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGG 237

Query: 237 --SSVLSSDSMHIGLL------AAAAHA---------------AATNSCFTVFFNPRASP 273
              S  +    + GL+       AAA A               AA    F V + PRAS 
Sbjct: 238 GDDSPAAGWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRAST 297

Query: 274 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 332
            EF +     V+     + S GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S W
Sbjct: 298 PEFCV-RAAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPW 356

Query: 333 RSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 384
           R ++V WDE    +   RVS W +E +++ P ++ + F    K+P  P+   F
Sbjct: 357 RLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRIPAYPEF 409


>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
 gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 149/395 (37%), Positives = 209/395 (52%), Gaps = 61/395 (15%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP- 72
           E  +KCL+S+LWHACAG +V +P V ++V YFPQGH+E      +         + NLP 
Sbjct: 13  EEADKCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVD---------FRNLPR 63

Query: 73  -PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK--DTFVPIELGIPSKQPTNY--- 126
               +C++ ++   AD ETDEV+A++ L P++  E    D  V +  G+ + Q  N    
Sbjct: 64  VSHNLCRVSDIKFMADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVS 123

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++  PP Q L+A+D+H   WKFRHI+RG 
Sbjct: 124 FAKTLTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGT 183

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP--------------P 232
           P+RHLLTTGWS FV+ K+L+AGDSV+F   E   L +G+RRA R                
Sbjct: 184 PRRHLLTTGWSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGS 243

Query: 233 TVMPS-----------------------------SVLSSDSMHIGLLAAAAHAAATNSCF 263
           + +PS                             S++    +    +  A   AA    F
Sbjct: 244 SAVPSGGFGAFLREDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPF 303

Query: 264 TVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDL 322
            V + PRA+  EF +  +  VK     R   GMRF+M FETE+SS +  +MGT+  +   
Sbjct: 304 EVVYYPRANTPEFCVKAS-LVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAA 362

Query: 323 DPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           D + W +S WR ++V WDE    +   RVS W +E
Sbjct: 363 DSLWWPHSPWRLLQVTWDEPDLLQNVKRVSPWLVE 397


>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
          Length = 694

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/401 (38%), Positives = 216/401 (53%), Gaps = 36/401 (8%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  +C++ +LW ACAG + ++P VG+ V YFPQGH+E   A         +     +P  
Sbjct: 14  GAERCVDRQLWLACAGGMCTVPPVGSSVYYFPQGHAEH--ALGLAAAGPGVGGLSRVPAL 71

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           L C++  V   AD +TDEV+A + L PL  + Q D           ++P + F KTLT S
Sbjct: 72  LPCRVAAVRYMADPDTDEVFAGIRLVPLRQDVQDDGAAAAGEDEEHEKPAS-FAKTLTQS 130

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 131 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYRGTPRRHLLTT 190

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP---------PTVMPSSVLSSDSM 245
           GWS FV+ K+LVAGDS++F+  +   L +GIRRA R          P      + +   M
Sbjct: 191 GWSAFVNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGWENQQLYTMGPM 250

Query: 246 HIGL------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV 287
             G                   +A AA  A +   F V + PRAS  EF +     V+A 
Sbjct: 251 RGGGNVSPSCKGGRRGKVRAEDVAEAARLAGSGQPFEVVYYPRASTPEFCV-RAAAVRAA 309

Query: 288 FHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 346
              +   GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S WR ++V WDE    +
Sbjct: 310 MRVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLLQVTWDEPDLLQ 369

Query: 347 RQPRVSLWEIEPLTTFP---MYPSLFPLRLKRPWHPSTSSF 384
              RVS W +E +++ P   +  S  P R K+P  P+   F
Sbjct: 370 NVKRVSPWLVELVSSMPAIHLASSFSPPR-KKPRIPAYPEF 409


>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
 gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
 gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
          Length = 695

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 215/393 (54%), Gaps = 57/393 (14%)

Query: 14  EGDNK-CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 72
           EGD    ++S+LW ACAG + S+P VG  V YFPQGH+EQ +A  +        +   +P
Sbjct: 8   EGDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVP 60

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK----------- 121
           P + C++  V   AD E+DEV+A++ L PL P +       +++G  +            
Sbjct: 61  PLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAV-----VDVGEAAAAEARREEENSR 115

Query: 122 -QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
            +PT+ F KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q + A+D+H VEW FR
Sbjct: 116 PRPTS-FAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFR 174

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RG P+RHLLTTGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     
Sbjct: 175 HIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDE 234

Query: 241 SSDSM-----HIGLLA------------------------AAAHAAATNSCFTVFFNPRA 271
           S  S+     + GL+                          AA  A T   F V + PRA
Sbjct: 235 SLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRA 294

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 330
           S  EF +     V+     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRW  S
Sbjct: 295 STPEFCV-RAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQS 353

Query: 331 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            WR ++V WDE    +   RV  W +E +++ P
Sbjct: 354 PWRLLQVTWDEPELLQNVKRVCPWLVELVSSMP 386



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 686 QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 745
           +L P +  V V +S +VGRSLD+S  SS+ EL   L  MF I     D LRS   LV+  
Sbjct: 606 ELNPGQCKVFV-ESETVGRSLDLSALSSFEELYACLSDMFSIG---SDELRS--HLVYRS 659

Query: 746 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
              +V   GD+P+ AFV +   ++IL+      +G+
Sbjct: 660 PAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNLGD 695


>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
 gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
          Length = 689

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/409 (39%), Positives = 224/409 (54%), Gaps = 50/409 (12%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + +CL+ +LWHACAG +V +P V +RV YFPQGH+E   A    ++ +       LPP +
Sbjct: 7   EERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHAGGAADLAA---GARPLPPLV 63

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIP-----SKQPTNY 126
           +C +  V   AD ETDEV+A++ L PL+P E    + D F     G+      +++  + 
Sbjct: 64  LCAVTGVRFLADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADAREKLSS 123

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 124 FAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGT 183

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PP 232
           P+RHLLTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P 
Sbjct: 184 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMSGWNAPG 243

Query: 233 TVMPSSVLSSD----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEF 276
               S+ L  +                 + I  +  AA  AA+   F V + PRAS  EF
Sbjct: 244 YGALSAFLKDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYYPRASTPEF 303

Query: 277 VIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSV 335
           V+     V+     +   GMRF+M FETE+SS +  +MGTI      DP+RW NS WR +
Sbjct: 304 VVKAAS-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLL 362

Query: 336 KVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 379
           +V WDE    +    V+ W +E +++ P    L P      +L+ P HP
Sbjct: 363 QVTWDEPDLLQNVKCVNPWLVEIVSSIPPI-HLGPFSPPRKKLRMPQHP 410


>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
          Length = 647

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/390 (39%), Positives = 210/390 (53%), Gaps = 49/390 (12%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K L+ +LWHACAG +V +P V ++V YFPQGH+E      +        + P +P  L+C
Sbjct: 7   KSLDPQLWHACAGSMVQIPPVNSKVFYFPQGHAEHSLYPVD------FSSSPPIPALLLC 60

Query: 78  QLHNVTMHADVETDEVYAQMTLQPL---SPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           ++ +V   AD ETDEVYA++ L PL    P+ + D       G  + +    F KTLT S
Sbjct: 61  RVASVKFLADAETDEVYAKIMLVPLPNTEPDLENDAV--FGGGSDNVEKPASFAKTLTQS 118

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD++  PP Q +IARD+H   WKFRHI+RG P+RHLLTT
Sbjct: 119 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPRRHLLTT 178

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----------------PPTVMPSS 238
           GWS FV+ K+LVAGDS++F+  E  +L +GIRRA R                 P    S 
Sbjct: 179 GWSSFVNHKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGNDVSPYGGFSG 238

Query: 239 VLSSDSMHI--------------GLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYV 284
            L  D   I                +  A   AA    F + + PRAS  EF +  +  V
Sbjct: 239 FLKEDESKITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYYPRASTPEFCVKASA-V 297

Query: 285 KAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 343
           +A         MRF+M FETE+ S +  +MGT++ +   DP+RW NS WR ++V WDE  
Sbjct: 298 RAAMRVPWCSLMRFKMAFETEDCSRISWFMGTVSSVHIADPLRWPNSPWRLLQVTWDEPD 357

Query: 344 AGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
             +   RVS W +E      + P++ P+ L
Sbjct: 358 LLQNVERVSPWLVE------LVPNMLPVHL 381


>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
 gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
 gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
          Length = 699

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 215/393 (54%), Gaps = 57/393 (14%)

Query: 14  EGDNK-CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 72
           EGD    ++S+LW ACAG + S+P VG  V YFPQGH+EQ +A  +        +   +P
Sbjct: 12  EGDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVP 64

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK----------- 121
           P + C++  V   AD E+DEV+A++ L PL P +       +++G  +            
Sbjct: 65  PLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAV-----VDVGEAAAAEARREEENSR 119

Query: 122 -QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
            +PT+ F KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q + A+D+H VEW FR
Sbjct: 120 PRPTS-FAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFR 178

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RG P+RHLLTTGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     
Sbjct: 179 HIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDE 238

Query: 241 SSDSM-----HIGLL------------------------AAAAHAAATNSCFTVFFNPRA 271
           S  S+     + GL+                          AA  A T   F V + PRA
Sbjct: 239 SLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRA 298

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 330
           S  EF +     V+     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRW  S
Sbjct: 299 STPEFCV-RAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQS 357

Query: 331 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            WR ++V WDE    +   RV  W +E +++ P
Sbjct: 358 PWRLLQVTWDEPELLQNVKRVCPWLVELVSSMP 390



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 686 QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 745
           +L P +  V V +S +VGRSLD+S  SS+ EL   L  MF I     D LRS   LV+  
Sbjct: 610 ELNPGQCKVFV-ESETVGRSLDLSALSSFEELYACLSDMFSIG---SDELRS--HLVYRS 663

Query: 746 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
              +V   GD+P+ AFV +   ++IL+      +G+
Sbjct: 664 PAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNLGD 699


>gi|297738134|emb|CBI27335.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 128/163 (78%), Positives = 140/163 (85%), Gaps = 7/163 (4%)

Query: 656 MPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYN 715
           MPLG SGF  S++GC+QD SELL N GQ+D  TP+RTFVKVYKSGSVGRSLDI+RFSSY+
Sbjct: 1   MPLGASGFQGSLFGCVQDPSELLQNAGQVDPPTPSRTFVKVYKSGSVGRSLDITRFSSYH 60

Query: 716 ELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPED 775
           ELREELGQMFGIEGK E+PLRSGWQLVFVDRENDVLLLGDDPWEAFV+NVWYIKILSPED
Sbjct: 61  ELREELGQMFGIEGKLENPLRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYIKILSPED 120

Query: 776 VQKMGEQGVES-FSPSSGQRANSRGNCGRDPV------GSLEY 811
           VQKMG+QG+ES FSP+S QR NS G   RD V      GSLEY
Sbjct: 121 VQKMGKQGIESGFSPNSAQRMNSSGTDDRDLVSGLPSAGSLEY 163


>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
          Length = 690

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/392 (39%), Positives = 212/392 (54%), Gaps = 57/392 (14%)

Query: 17  NKCL-NSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
            +CL + +LWHACAG +V +P V +RV YFPQGH+E      + ++ +       +P  +
Sbjct: 17  GRCLVDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-----RVPALV 71

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTA 133
           +C++  V   AD +TDEV A++ L P+ P E    D   P   G    +P + F KTLT 
Sbjct: 72  LCRVDAVRFLADPDTDEVLARVRLAPVRPNEPDHADAAAP---GAREDKPAS-FAKTLTQ 127

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+RHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 187

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMP---- 236
           TGWS FV+ KRLVAGDS++F+      L +GIRRA +             PP        
Sbjct: 188 TGWSAFVNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYG 247

Query: 237 ----SSVL---SSDSMHIGL---------LAAAAHAAATNSCFTVFFNPRASPSEFVIPL 280
               S+ L     D+   G          +  AA+ AA+   F V + PRAS  EF +  
Sbjct: 248 YAGFSTFLRGEEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCV-K 306

Query: 281 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 339
              V+A   T+   GMRF+M FETE+SS +  +MGT+  +   DP+RW NS WR +    
Sbjct: 307 AGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLL---- 362

Query: 340 DESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
                 +   RVS W +E +++ P    L P 
Sbjct: 363 ------QNVKRVSPWLVELVSSTPAIHHLTPF 388


>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 537

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 120/231 (51%), Positives = 167/231 (72%), Gaps = 2/231 (0%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+QEL+A+DLH  +W+FRHI+RGQ
Sbjct: 11  FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQ 70

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 246
           P+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +S+S  
Sbjct: 71  PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSK 130

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
           I  L+A A++    S F + +NPRA+ SEF+IP  K++K++ +    +GMRF++ + +E+
Sbjct: 131 IHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSL-NRPFCIGMRFKIQYGSED 189

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            + RR  G ITGI+D+DP+RW+ S W+S+ V W++ T    Q R+S WEIE
Sbjct: 190 VNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIE 239


>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
          Length = 715

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/420 (38%), Positives = 223/420 (53%), Gaps = 54/420 (12%)

Query: 9   CQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNY 68
           C  G    +  ++S+LW ACAG + S+P VG  V YFPQGH+EQ A      VD  +P  
Sbjct: 9   CPAGSSAADDAVDSQLWLACAGSMCSVPPVGAAVYYFPQGHAEQAAGA--GAVD--MPRV 64

Query: 69  PNLPPQLICQLHNVTMHADVETDEVYAQMTLQPL-------SPEEQKDTFVPIELGIPSK 121
           P+L P   C++  V   AD ++DEV+A++ L PL          E      P++    + 
Sbjct: 65  PDLVP---CRVSAVRFMADPQSDEVFAKIRLLPLRRGEPVADVGEAAAAREPLQQDADNN 121

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           +P + F KTLT SD +  GGFSVPR  AE +FP+LD+  +PP Q +  RD+H  E+KFRH
Sbjct: 122 KPAS-FAKTLTQSDANNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRH 180

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-----WNEKNQLLLGIRRAIR----PP 232
           I+RG P+RHLLTTGWS FV+ K+L+AGDSV+F+          ++ +GIRRA R      
Sbjct: 181 IYRGTPRRHLLTTGWSNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGAD 240

Query: 233 TVMPSSVLSSDSMHIGLLAAAAHA-------------------------AATNSCFTVFF 267
              PSS  S    + GL+   A +                         AA    F V +
Sbjct: 241 VEGPSSAASGWDHYRGLMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLAAAGQVFEVVY 300

Query: 268 NPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVR 326
            PRAS  EF +     VKA    R   GMRF+M FETE+SS +  +MGT+ G+   DPV 
Sbjct: 301 YPRASTPEFCV-RAGAVKAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVAGVCAADPVH 359

Query: 327 WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP--MYPSLFPLRLKRPWHPSTSSF 384
           W  S WR ++V WDE    +   RV  W +E +++ P    PS  P R K+P  P+ + F
Sbjct: 360 WPQSPWRLLQVSWDEPELLQNVKRVCPWLVELVSSMPNLHLPSFSPPR-KKPRIPTCADF 418



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S ++GR+LD+S+ SS+ EL   +  MF IE      LR+   + +     +V  
Sbjct: 638 CKVFVESDAIGRNLDLSQLSSFEELYSRMSDMFDIESA---ELRN--NVHYRSAAGEVKN 692

Query: 753 LGDDPWEAFVSNVWYIKILS 772
           +GD+P+ AFV +   + I +
Sbjct: 693 VGDEPFRAFVKSARRLTIFA 712


>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
          Length = 681

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/397 (37%), Positives = 212/397 (53%), Gaps = 33/397 (8%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E        E+ +       +P  
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           + C++ +V   AD +TDEV+A++ L PL   E  D            +    F KTLT S
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H V W FRHI+RG P+RHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----PPTVMPSSVLSSDSMHIGLL 250
           GWS FV+ K+LVAGDS++F+  +   L +GIRRA R           + L     + GL+
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247

Query: 251 ---------------------AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH 289
                                  AA  A+    F V + PRAS  EF +     V+A   
Sbjct: 248 RGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYYPRASTPEFCV-RAAAVRAAMR 306

Query: 290 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 348
            +   GMRF+M FETE+SS +  +MGT+  +   DP+RW  S WR ++V WDE    +  
Sbjct: 307 VQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNV 366

Query: 349 PRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 384
            RVS W +E +++ P ++ S F    K+P  P+   F
Sbjct: 367 KRVSPWLVELVSSMPAIHLSSFSPPRKKPRIPAYPEF 403


>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
          Length = 707

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 155/411 (37%), Positives = 221/411 (53%), Gaps = 34/411 (8%)

Query: 3   LSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD 62
           ++ + L +    G  +C++ +LW ACAG + ++P VG  V YFPQGH+E  A   +   D
Sbjct: 2   ITFADLTEPAAAGAERCVDRQLWLACAGSMCTVPLVGASVCYFPQGHAEH-ALGLDGAAD 60

Query: 63  SHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQ 122
                 P L P   C++  V   AD +TDEV+A++ L PL   E     +  ++    +Q
Sbjct: 61  LSAARVPALVP---CRVTAVRYMADPDTDEVFARIRLVPLRGGEAHAGGLDDDVAAADEQ 117

Query: 123 PT-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
                F KTLT SD +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRH
Sbjct: 118 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRH 177

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLS 241
           I+RG P+RHLLTTGWS FV+ K+L+AGDS++F+  +   L +GIRRA R           
Sbjct: 178 IYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGD 237

Query: 242 SDSM-----HIGLL------AAAAHA---------------AATNSCFTVFFNPRASPSE 275
                    + GL+       AAA A               AA    F V + PRAS  E
Sbjct: 238 EAPTPGWHHYAGLIRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPE 297

Query: 276 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 334
           F +     V+A    + S GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S WR 
Sbjct: 298 FCV-RAAAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRL 356

Query: 335 VKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 384
           ++V WDE    +   RVS W +E +++ P ++ + F    K+P  P+   F
Sbjct: 357 LQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRIPAYPEF 407



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S +VGR+LD+S   S++EL   L +MFG+EG     +RS  ++++     +V  
Sbjct: 624 CKVFVESDTVGRNLDLSALGSFDELYGRLSEMFGVEGA---EMRS--RVLYRGATGEVRH 678

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMG 780
            GD+P+  FV +   I IL+      +G
Sbjct: 679 AGDEPFSDFVKSARRITILTDAGSDNLG 706


>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
 gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
          Length = 671

 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 142/382 (37%), Positives = 207/382 (54%), Gaps = 48/382 (12%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           + KC++S  WH C G +V +P V ++V YFPQG++E      +  V + IP        +
Sbjct: 5   EEKCVDSLFWHVCTGSMVQIPPVNSKVFYFPQGYAEHTFTNVDFTVLARIP------AMI 58

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           +C++  V   AD ETDEVYA++ L P+  E+ +D  V  E   P+     +F KTLT SD
Sbjct: 59  LCRVDAVKFLADTETDEVYAKIRLIPV--EDFEDDSVVEETEKPA-----FFAKTLTQSD 111

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
            +  GGFSVPR  AE +FP LDF+  PP Q + A+D+H V W FRHI+RG P+RHLLT+G
Sbjct: 112 ANNGGGFSVPRYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLTSG 171

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS--SVLSSDSMHIGLLAAA 253
           WS FV+ K+LVAG SV+F+  E ++L +GIRR  R     P   S   S +   G     
Sbjct: 172 WSAFVNKKKLVAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACSYGGFVTE 231

Query: 254 AHAAATN------------------------SC-------FTVFFNPRASPSEFVIPLTK 282
              ++TN                        SC       F + + P AS  E+ +  + 
Sbjct: 232 DENSSTNGNLISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPEYCVKASS 291

Query: 283 YVKAVFHTRVSVGMRFRMLFETEE-SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDE 341
            V+A    +   GMRF+M FETE+ S +  +MG+I+ +  +DP+RW +S WR ++V WDE
Sbjct: 292 -VRAAMSVQWCSGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLLQVTWDE 350

Query: 342 STAGERQPRVSLWEIEPLTTFP 363
               +    V+ W +E ++  P
Sbjct: 351 PDLLQNVKSVNPWLVELVSNMP 372


>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
          Length = 714

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/405 (37%), Positives = 210/405 (51%), Gaps = 71/405 (17%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQ--LI 76
           L+++LWHACAG +V LP VG +VVYFPQGH EQ A+T         P +P  L P   + 
Sbjct: 36  LDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQAAST---------PEFPRTLVPNGSVP 86

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ +V   AD ETDEV+A++ LQP      +D      L  P  +    F KTLT SD 
Sbjct: 87  CRVVSVNFLADTETDEVFARICLQPEIGSSAQD-LTDDSLASPPLEKPASFAKTLTQSDA 145

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           +  GGFS+PR  AE +FP LD+ + PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGW
Sbjct: 146 NNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGW 205

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----------------PPTVMPS--S 238
           S FV+ K+LVAGD+++F+     +L +G+RR++R                  T+ PS   
Sbjct: 206 STFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISNASTIRPSRWE 265

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCF----------TVFFNPRA----------------- 271
           V  ++S    L     +  A NS            + F   RA                 
Sbjct: 266 VKGTESFSDFLGGVGDNGYALNSSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSG 325

Query: 272 -----------SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGI 319
                      S +EF +     VK         GMRF+M FETE+SS +  +MGTI  +
Sbjct: 326 ERFEVVYYPRASTAEFCVK-AGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAV 384

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
              DPV W +S WR ++V WDE    +   RVS W++E + T PM
Sbjct: 385 QAADPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLELVATLPM 429


>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
 gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
          Length = 634

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/369 (39%), Positives = 200/369 (54%), Gaps = 60/369 (16%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L  ELW ACAGPLV +P  G +VVY+PQGH EQV A  N++    +P Y NLP ++ C++
Sbjct: 44  LYKELWRACAGPLVYVPRAGEKVVYYPQGHMEQVEAYMNQDGKMEMPVY-NLPSKIFCKV 102

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG----IPSKQPTNYFCKTLTASD 135
            NV + A+  TDEV+AQ+TL P   E ++D     E G    +P K     F K LT+SD
Sbjct: 103 INVQLKAEAGTDEVFAQITLLP---ETKQDVLSLKEDGNSLPLPRKADLRSFSKKLTSSD 159

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
           TSTHGGFSV +R AE+  P +D S +PP Q L+A+D+H                      
Sbjct: 160 TSTHGGFSVLKRHAEECLPPMDMSGEPPEQMLVAKDMH---------------------- 197

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
                                E  +L +G+RRA++  +   +SV+S+ SM  G+L+ A H
Sbjct: 198 --------------------GENGELRIGLRRAMKLHSNASTSVISAHSMQHGILSMAFH 237

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
           A  T S FTV++ P  +P+EF+IP  +YV++      SVG  F MLFE EE + +R  GT
Sbjct: 238 AITTGSIFTVYYRPWTNPTEFIIPFDQYVESA-ELEYSVGTTFGMLFEVEECAEQRSEGT 296

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIEPLTTFPMYPSLFPLRLK 374
           I G  D+D +RW NS WRS+K  WD ++ G   P RVS W I P+     Y S       
Sbjct: 297 IVGNEDVDHIRWPNSEWRSLKAKWDATSEGFVHPDRVSPWMIVPIEPIKKYDS------- 349

Query: 375 RPWHPSTSS 383
            P HPS  +
Sbjct: 350 -PLHPSKKA 357



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 49/221 (22%)

Query: 554 GSLPEGSGNLLNFS---GAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDA 610
           G++    GN+   S   G  P ++    P+ ++GS+                        
Sbjct: 416 GTILFSGGNITRLSLPNGCSPPLISNGIPENAIGSR---------------------NLT 454

Query: 611 AVGTENCNTDSQN------------------SVVFGVHIDSSGLLLPTTVSSFTTSVDPG 652
            +  ++CN+ SQ+                   ++FGV +  S   LP+  ++  +  +  
Sbjct: 455 VLNVKSCNSGSQDWRTLELKDAHAPPNGGGRYMLFGVDLVKSLPELPSPQAATYSDHESL 514

Query: 653 VSSMPLGDSGFHN-SMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRF 711
            S +P+  S     S      +S     N      L+ T    KV K GS GRS+DI++F
Sbjct: 515 YSVLPISQSSVAEPSKCTSATNSGSQCKNCCSFTNLSCT----KVLKHGSAGRSVDITKF 570

Query: 712 SSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
             Y++L  EL QMF  +G   D   SGW++ + D E D++L
Sbjct: 571 DGYDKLIRELDQMFDFKGTLIDG-SSGWEVTY-DDEGDIML 609


>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
 gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
          Length = 379

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/369 (38%), Positives = 201/369 (54%), Gaps = 44/369 (11%)

Query: 12  GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 71
           G   + +CL+ +LWHACAG +V +P   +RV YF QGH+E           +       L
Sbjct: 5   GEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRAL 64

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPI----ELGIPSKQP 123
           PP ++C++  V   AD ++DEVYA++ L P++P E    + D   P+    +   PS + 
Sbjct: 65  PPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEK 124

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
              F KTLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H V WKFRHI+
Sbjct: 125 PTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIY 184

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT----VMP--- 236
           RG P+RHLLTTGWS FV+ K+LVAGDS++F+     +L +GIRRA R        M    
Sbjct: 185 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWN 244

Query: 237 ---------SSVLSSDS------------------MHIGLLAAAAHAAATNSCFTVFFNP 269
                    S+ L  +                   + +  +  AA  A++   F V + P
Sbjct: 245 APGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYP 304

Query: 270 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 328
           RAS  +FV+     V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP RW 
Sbjct: 305 RASTPDFVVKAAS-VQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWP 363

Query: 329 NSHWRSVKV 337
           NS WR ++V
Sbjct: 364 NSPWRLLQV 372


>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
 gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
          Length = 708

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/410 (37%), Positives = 219/410 (53%), Gaps = 34/410 (8%)

Query: 3   LSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD 62
           ++ + L +    G  +C++ +LW ACAG + ++P VG  V YFPQGH+E          D
Sbjct: 2   ITFADLTEPATAGAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGT-AD 60

Query: 63  SHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQ 122
                 P L P   C++  V   AD +TDEV+A++ L PL   E     +  +     ++
Sbjct: 61  LSAARVPALVP---CRVAAVRYMADPDTDEVFARIRLVPLRGGEADAGGLEDDAADEQEK 117

Query: 123 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
           P + F KTLT SD +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI
Sbjct: 118 PAS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHI 176

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RG P+RHLLTTGWS FV+ K+LVAGDS++F+  +   L +GIRRA R            
Sbjct: 177 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEE 236

Query: 243 D-----SMHIGLL------AAAAHA---------------AATNSCFTVFFNPRASPSEF 276
                   + GL+       AAA A               AA    F   + PRAS  EF
Sbjct: 237 APSPGWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPRASTPEF 296

Query: 277 VIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSV 335
            +     V+A    + S GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S WR +
Sbjct: 297 CV-RAAAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLL 355

Query: 336 KVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 384
           +V WDE    +   RVS W +E +++ P ++ + F    K+P  P+   F
Sbjct: 356 QVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRIPAYPEF 405



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 14/112 (12%)

Query: 669 GCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIE 728
           G  Q  SEL    GQ       + FV+   S +VGR+LD+S  SS++EL   L +MFGIE
Sbjct: 610 GSQQQVSELGLEPGQC------KVFVE---SDTVGRNLDLSALSSFDELYRRLSEMFGIE 660

Query: 729 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           G     LRS  ++++     +V   GD+P+  FV +   + IL+      +G
Sbjct: 661 GA---ELRS--RVLYRCATGEVKHAGDEPFSDFVRSARRLTILTDAGSDNLG 707


>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
 gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
          Length = 681

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/375 (38%), Positives = 201/375 (53%), Gaps = 32/375 (8%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E        E+ +       +P  
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           + C++ +V   AD +TDEV+A++ L PL   E  D            +    F KTLT S
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H V W FRHI+RG P+RHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----PPTVMPSSVLSSDSMHIGL- 249
           GWS FV+ K+LVAGDS++F+  +   L +GIRRA R           + L     + GL 
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247

Query: 250 --------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH 289
                               L  AA  A     F V + PRAS  EF +     V+A   
Sbjct: 248 RGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCV-RAAAVRAAMR 306

Query: 290 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 348
            +   GMRF+M FETE+SS +  +MGT+  +   DP+RW  S WR ++V WDE    +  
Sbjct: 307 VQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNV 366

Query: 349 PRVSLWEIEPLTTFP 363
            RVS W +E +++ P
Sbjct: 367 KRVSPWLVELVSSMP 381


>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
          Length = 588

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 120/233 (51%), Positives = 164/233 (70%), Gaps = 2/233 (0%)

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA DLH  +WKFRHI+R
Sbjct: 32  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYR 91

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLLT GWS FV+ K+LV+GD+VLF+  +  QL LG+RRA++         ++S  
Sbjct: 92  GQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSD 151

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
             + +L++ A +    S F + FNPR+  SEF++P  + +K++ H   S+GMRFR+ +E+
Sbjct: 152 SKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHP-FSIGMRFRVCYES 210

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           E+++  R  G I+GIS++DP+RW  S W+ + V WD+ST    Q RVS WEIE
Sbjct: 211 EDAN-ERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIE 262


>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
 gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
          Length = 587

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 120/233 (51%), Positives = 164/233 (70%), Gaps = 2/233 (0%)

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA DLH  +WKFRHI+R
Sbjct: 31  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYR 90

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           GQP+RHLLT GWS FV+ K+LV+GD+VLF+  +  QL LG+RRA++         ++S  
Sbjct: 91  GQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSD 150

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
             + +L++ A +    S F + FNPR+  SEF++P  + +K++ H   S+GMRFR+ +E+
Sbjct: 151 SKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHP-FSIGMRFRVCYES 209

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           E+++  R  G I+GIS++DP+RW  S W+ + V WD+ST    Q RVS WEIE
Sbjct: 210 EDAN-ERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIE 261


>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
          Length = 549

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 131/344 (38%), Positives = 202/344 (58%), Gaps = 20/344 (5%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  LN +LW  CAGPL   P +G           E++ A+ + E+    P + ++P ++ 
Sbjct: 20  NNYLNDKLWKLCAGPLFDTPKIG-----------EKLVASMDDELCQLKPIF-DIPSKIC 67

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C + ++ +  +  T+E+YA+++L P    +  D  +PI     + Q  NYF K L+ASDT
Sbjct: 68  CNVFSINLKVEPSTNEIYAEVSLLP----DTSDVEIPIPKNENNIQNINYFTKVLSASDT 123

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           ST+GGF + +R A +  P LD S   P+QE+IA+D+H  EW F+H  RG PKRHL T+GW
Sbjct: 124 STNGGFVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRHLFTSGW 183

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           + F   K+LVAGDS +F+  E  +  +GI +A      +P+S++S +SMH  ++A A +A
Sbjct: 184 NEFAKGKKLVAGDSFVFLRGENGESRVGISKAAHQQRNIPTSLISKESMHHSVVATALNA 243

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
                 F VF+ PR+  S+F++   K+V  V + + S+G +F M FE ++ +  RY GT+
Sbjct: 244 IENKCMFVVFYKPRS--SQFIVNFDKFVDRV-NNKFSIGSKFSMKFEGKDLNEIRYNGTV 300

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
            G+ D     W +S WRS++V WDE+    R  +VS WEIE LT
Sbjct: 301 VGVRDFS-THWKDSEWRSLEVQWDEAATIPRPDKVSPWEIELLT 343



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 691 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
           ++  KV+  G + R++D++ F  YN+L +EL ++F I+G+    + + W++ F+  + D+
Sbjct: 438 KSRTKVHMEGVIERTVDLTIFDGYNQLIDELERLFDIKGELH--MHNKWKMFFIYNDGDM 495

Query: 751 LLLGDDPWEAFVSNVWYIKILSPEDVQ 777
           ++LGDDPW  F +    I I S EDV+
Sbjct: 496 MILGDDPWPKFCNMAKEIFICSKEDVK 522


>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
          Length = 370

 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 143/360 (39%), Positives = 199/360 (55%), Gaps = 40/360 (11%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
            + +CL+ +LWHACAG +V +P V +RV YFPQGH+E        ++         LP  
Sbjct: 5   AEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR----ALPSL 60

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTL 131
           ++C +  V   AD ETDEV+A++ L P++P E  +   P E  +    +++  + F KTL
Sbjct: 61  VLCSVTGVRFLADPETDEVFAKIRLVPVAPGEV-EFREPDEFSVDPADAREKLSSFAKTL 119

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHI+RG P+RHL
Sbjct: 120 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHL 179

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 237
           LTTGWS FV+ K+LVAGDS++F+  E  +L +GIRR  R              P     S
Sbjct: 180 LTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALS 239

Query: 238 SVLSSD----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLT 281
           + L  +                 + I  +  AA  AA+   F V + PRAS  EFV+   
Sbjct: 240 AFLKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKAA 299

Query: 282 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWD 340
             V+     +   GMRF+M FETE+SS +  +MGTI      DP+RW NS WR ++V  D
Sbjct: 300 S-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVLLD 358


>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 629

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/355 (39%), Positives = 197/355 (55%), Gaps = 28/355 (7%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW  CAGPL  +P VG +V YFPQGH E + + +     S   +        + ++  +
Sbjct: 28  QLWKLCAGPLYDIPKVGEKVYYFPQGHIE-ILSLSLSLSLSLSLSLSLSLSLSLSRVIAI 86

Query: 83  TMHADVETDEVYAQMTLQPLSPE----EQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
            +  +  +DE YA++TL P + +     Q D           +   N F K LTASDTS 
Sbjct: 87  QLKVEKNSDETYAEITLMPYTTQVVIHNQNDNHY--------RPSVNSFTKVLTASDTSA 138

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
           HGGFSVPR+ A +  P L+ S   PAQEL+  DL   +W+F+H +RG P RHL+TTGW+ 
Sbjct: 139 HGGFSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPPRHLITTGWNA 198

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           F ++K+LVAGD ++F+  E  +L +GIRRA       PSS++S DSM  G++A+A HA  
Sbjct: 199 FTTSKKLVAGDVIVFLRGECGELRVGIRRAGHQQGNRPSSLISIDSMGHGVIASAVHAFD 258

Query: 259 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
               F V   P    S+F++   K++ AV + + +VG RF M FE ++ S RRY GTI G
Sbjct: 259 NQCMFIVVCKPSIRSSQFIVSYDKFLDAV-NKKFNVGSRFTMRFEGDDLSERRYSGTIIG 317

Query: 319 ISDLDPVRWSNSHWRS-------------VKVGWDESTAGERQPRVSLWEIEPLT 360
           + D  P  W  S WRS             ++V WDE  +  R  +VS WEIE LT
Sbjct: 318 VKDFSP-HWIESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEIEHLT 371



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 3/101 (2%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  QL+ TR+  KV   G +VGR+LD+S  + Y++L  EL ++F + G+ +   R+ W++
Sbjct: 524 QSKQLSSTRSCTKVQMEGVTVGRALDLSVLNGYDQLILELEKLFDLNGQLQT--RNQWEI 581

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
            F+D E D + +GDDPW  F + V  I I + E V+ +  +
Sbjct: 582 SFIDNEGDKMFVGDDPWPEFCNMVKRIIIYTKEKVKNLKSE 622


>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
          Length = 585

 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 115/237 (48%), Positives = 164/237 (69%), Gaps = 2/237 (0%)

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
           K  ++ FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FR
Sbjct: 29  KHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 88

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RGQP+RHLLTTGWS F++ K+LV+GD+VLF+     +L LG+RRA++         +
Sbjct: 89  HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAV 148

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           +     + +L+A A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++
Sbjct: 149 NCTDSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSL-NYHFSVGTRFKV 207

Query: 301 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
             E E+++ R + G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 208 GCENEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 263


>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
 gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
          Length = 575

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 120/252 (47%), Positives = 169/252 (67%), Gaps = 4/252 (1%)

Query: 106 EQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQ 165
           E+KD     E G   K  ++ FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+Q
Sbjct: 12  EEKDG--EKEDGDGEKLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQ 69

Query: 166 ELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGI 225
           ELIA+DLH ++W+FRHI+RGQP+RHLLTTGWS F++ K+LV+GD+VLF+     +L LG+
Sbjct: 70  ELIAKDLHGMKWRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGV 129

Query: 226 RRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVK 285
           RRA++         ++     + +L+A A +    S F + FNPR   SEF++P  K++K
Sbjct: 130 RRAVQLKNEALLEAVNCTDSKLLMLSAVASSLDNRSIFHICFNPRIGASEFIVPYCKFLK 189

Query: 286 AVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAG 345
            + +   S+G RF++  + E+++ R + G I+GIS++DP+RW  S W+S+ V WD  T  
Sbjct: 190 GLNYP-FSIGTRFKVGCKNEDANERSF-GLISGISEVDPIRWPGSKWKSLLVKWDGDTKY 247

Query: 346 ERQPRVSLWEIE 357
             Q RVS W+IE
Sbjct: 248 SHQNRVSPWDIE 259


>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
          Length = 360

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/337 (41%), Positives = 187/337 (55%), Gaps = 37/337 (10%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G+ +CL+ +LWHACAG +V +P V +RV YFPQGH+E  A       D        LPP 
Sbjct: 5   GEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEH-AHGGGGATDLAGARARPLPPL 63

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTL 131
           ++C +  V   AD ETDEV+A++ L P +P E  +   P E GI    +++  + F KTL
Sbjct: 64  VLCTVAGVRFLADPETDEVFAKIRLVPAAPGEV-EFGEPREFGIDPEDAREKLSSFAKTL 122

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHIFRG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHL 182

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMPSS 238
           LTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P     S
Sbjct: 183 LTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALS 242

Query: 239 VLSSD-----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLT 281
               D                  + I  +  AA  AA+   F V + PRAS  EFV+   
Sbjct: 243 AFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAA 302

Query: 282 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTIT 317
             V+     +   GMRF+M FETE+SS +  +MGTI 
Sbjct: 303 S-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIA 338


>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
          Length = 699

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 147/393 (37%), Positives = 210/393 (53%), Gaps = 57/393 (14%)

Query: 14  EGDNK-CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 72
           EGD    ++S+LW ACAG + S+P VG  V YFPQGH+EQ +A  +        +   +P
Sbjct: 12  EGDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVP 64

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK----------- 121
           P + C++  V   AD E+DEV+A++ L PL P +       +++G  +            
Sbjct: 65  PLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAV-----VDVGEAAAAEARREEENSR 119

Query: 122 -QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
            +PT+ F KTLT SD +   G    R  AE +FP LD+S +PP Q + A+D+H VEW FR
Sbjct: 120 PRPTS-FAKTLTQSDANNGRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFR 178

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RG P+RHLLTTGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     
Sbjct: 179 HIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDE 238

Query: 241 SSDSM-----HIGLL------------------------AAAAHAAATNSCFTVFFNPRA 271
           S  S+     + GL+                          AA  A T   F V + PRA
Sbjct: 239 SLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRA 298

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 330
           S  EF +     V+     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRW  S
Sbjct: 299 STPEFCV-RAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQS 357

Query: 331 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
            WR ++V WDE    +   RV  W +E +++ P
Sbjct: 358 PWRLLQVTWDEPELLQNVKRVCPWLVELVSSMP 390



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 686 QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 745
           +L P +  V V +S +VGRSLD+S  SS+ EL   L  MF I     D LRS   LV+  
Sbjct: 610 ELNPGQCKVFV-ESETVGRSLDLSALSSFEELYACLSDMFSIG---SDELRS--HLVYRS 663

Query: 746 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
              +V   GD+P+ AFV +   ++IL+      +G+
Sbjct: 664 PAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNLGD 699


>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
           Group]
          Length = 599

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 120/245 (48%), Positives = 164/245 (66%), Gaps = 14/245 (5%)

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL------------DFSLQPPAQELIARDL 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP L            D+    P+QELIA DL
Sbjct: 31  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVRPSQELIAVDL 90

Query: 173 HDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPP 232
           H  +WKFRHI+RGQP+RHLLT GWS FV+ K+LV+GD+VLF+  +  QL LG+RRA++  
Sbjct: 91  HGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLR 150

Query: 233 TVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRV 292
                  ++S    + +L++ A +    S F + FNPR+  SEF++P  + +K++ H   
Sbjct: 151 NEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHP-F 209

Query: 293 SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVS 352
           S+GMRFR+ +E+E+++  R  G I+GIS++DP+RW  S W+ + V WD+ST    Q RVS
Sbjct: 210 SIGMRFRVCYESEDAN-ERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVS 268

Query: 353 LWEIE 357
            WEIE
Sbjct: 269 PWEIE 273


>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
 gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
          Length = 375

 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 203/366 (55%), Gaps = 54/366 (14%)

Query: 15  GDNK--CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 72
            DNK  C +S LW ACAG +V +P V + V+YFPQGH+E          D  IP+Y    
Sbjct: 9   ADNKSNCFDSRLWQACAGTMVKMPAVDSIVLYFPQGHAEHAGVNVEFRSDVKIPSY---- 64

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPL-------SPEEQKDTFVPIELGIPSKQPTN 125
             + C++ ++   A+ ETDEV+A++ L P+       +PEE+      +++G  + +   
Sbjct: 65  --IPCRVSSIKYMAERETDEVFAKIRLTPVRLSEFFETPEEEG----MVKIGSDNSRKPL 118

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
            F KTLT SD +  GGFSVP+  A+ +FP+LD+++ PP Q L A D+H   W+FRHI+RG
Sbjct: 119 SFAKTLTQSDANNGGGFSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIYRG 178

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR------AIRP---PTVMP 236
            P+RHLLTTGWS FV+ K+LVAGDS++F+ NE +++ +GIRR      A+ P   P   P
Sbjct: 179 TPERHLLTTGWSTFVNQKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWWFP 238

Query: 237 S-------------------------SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRA 271
           S                         S+++  ++    +  A   A     F V F P++
Sbjct: 239 SVGNLTIPRGGFSAFLRDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYPQS 298

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSH 331
           +  EF +  ++ VKA        GMRF+M FETE+  +  +MGTI+ +   DP +W +S 
Sbjct: 299 TTPEFFVKASR-VKAALQIPWCSGMRFKMPFETEDLVISWFMGTISSVQANDPSQWPDSP 357

Query: 332 WRSVKV 337
           WR ++V
Sbjct: 358 WRMLQV 363


>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
 gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
          Length = 392

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/367 (39%), Positives = 202/367 (55%), Gaps = 57/367 (15%)

Query: 14  EGDNK-CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 72
           EGD    ++S+LW ACAG + S+P VG  V YFPQGH+EQ +A  +        +   +P
Sbjct: 12  EGDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVP 64

Query: 73  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK----------- 121
           P + C++  V   AD E+DEV+A++ L PL P +       +++G  +            
Sbjct: 65  PLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAV-----VDVGEAAAAEARREEENSR 119

Query: 122 -QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 180
            +PT+ F KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q + A+D+H VEW FR
Sbjct: 120 PRPTS-FAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFR 178

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 240
           HI+RG P+RHLLTTGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     
Sbjct: 179 HIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDE 238

Query: 241 SSDSM-----HIGLLA------------------------AAAHAAATNSCFTVFFNPRA 271
           S  S+     + GL+                          AA  A T   F V + PRA
Sbjct: 239 SLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRA 298

Query: 272 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 330
           S  EF +     V+     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRW  S
Sbjct: 299 STPEFCV-RAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQS 357

Query: 331 HWRSVKV 337
            WR ++V
Sbjct: 358 PWRLLQV 364


>gi|327493279|gb|AEA86346.1| auxin response factor [Solanum nigrum]
          Length = 139

 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 115/139 (82%), Positives = 125/139 (89%), Gaps = 3/139 (2%)

Query: 1   MKLSTSGLCQQGHE--GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN 58
           M++S+SG   Q  E  G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN
Sbjct: 1   MRVSSSGFNPQPEEATGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60

Query: 59  KEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKD-TFVPIELG 117
           KEVD+HIPNYP LPPQLICQLHN+TMHADVETDEVYAQMTLQPLSP+EQKD   +P ELG
Sbjct: 61  KEVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELG 120

Query: 118 IPSKQPTNYFCKTLTASDT 136
           IPSKQPTNYFCKTLTASDT
Sbjct: 121 IPSKQPTNYFCKTLTASDT 139


>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 578

 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 129/314 (41%), Positives = 184/314 (58%), Gaps = 24/314 (7%)

Query: 57  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTF 111
           T+  +   +P     PP L  ++  + +  +  +DE YA++TL P     + P + ++ F
Sbjct: 18  THHTISHTLPCKAKQPPPLQRRVIAIQLKVERNSDETYAEITLMPNTTQVVIPTQNENQF 77

Query: 112 VPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARD 171
            P+          N F K LTASDTS HGGFSVPR+ A +  P LD S   PAQEL+  D
Sbjct: 78  RPL---------VNSFTKVLTASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTID 128

Query: 172 LHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP 231
           LH  +W+F+H +RG P+RHLLTTGW+ F+++K+LVAGD ++F+  E  +L + IRRA   
Sbjct: 129 LHGNQWRFKHSYRGTPRRHLLTTGWNAFITSKKLVAGDVIVFLRGETGELRVSIRRARYQ 188

Query: 232 PTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPR--------ASPSEFVIPLTKY 283
              +PSS++S +SM  G++A+A HA      F V + PR           S+F++   K+
Sbjct: 189 QGNIPSSLISIESMRHGVIASAKHAFDNQCMFIVVYKPRFIFCVCISIRSSQFIVNYDKF 248

Query: 284 VKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 343
           + AV + + +VG RF M FE E  S RRY GTI G+SD  P  W  S WRS+KV WDE  
Sbjct: 249 LDAV-NNKFNVGSRFTMRFEEENFSERRYFGTIIGVSDFSP-HWKCSEWRSLKVQWDEFA 306

Query: 344 AGERQPRVSLWEIE 357
           +  R  +VS WEI+
Sbjct: 307 SFPRPDKVSPWEIK 320



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 69/110 (62%), Gaps = 8/110 (7%)

Query: 669 GCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGI 727
           G M+ + E+     Q  QL+ TRT  KV   G ++GR+LD+S  + Y++L  EL ++F +
Sbjct: 466 GQMRSTREI-----QSKQLSSTRTCTKVQMHGVTLGRALDLSVLNGYDQLILELEKLFDL 520

Query: 728 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 777
           +G+ ++  R+ W++VF D E D +L+GDDPW  F + V  I I S E+V+
Sbjct: 521 KGQLQN--RNQWEIVFTDNEEDEMLVGDDPWPEFCNMVKKIIIYSKEEVK 568


>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
 gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
 gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 479

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 133/340 (39%), Positives = 189/340 (55%), Gaps = 39/340 (11%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 25  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 83

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYF-CKTLTASDTSTHGG 141
               D  TDEVYAQ++L P + E      +     + +++P  YF  K LTASD S  GG
Sbjct: 84  DRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138

Query: 142 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT--GWSVF 199
             +P++ A + FP LD S     Q L+A+DL+  EW F+H+FRG P+RH+ T+  GWSVF
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
            + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
              F V + P                             RM FE ++ S +RY GTI G+
Sbjct: 259 KCMFNVVYKP-----------------------------RMQFEGKDFSEKRYDGTIIGV 289

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           +D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 290 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 328


>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
          Length = 767

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 190/314 (60%), Gaps = 19/314 (6%)

Query: 52  QVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEE 106
            V A+T +E++   P   + P +L C++  + +  +  +DE YA++TL P     + P +
Sbjct: 112 HVEASTREELNELQP-ICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQ 170

Query: 107 QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 166
            ++ F P+          N F K LTASDTS HGGFSVP++ A +  P LD S   P QE
Sbjct: 171 NQNQFRPL---------VNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQE 221

Query: 167 LIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 226
           ++A DLH  +W+FRHI+RG  +RHLLT GW+ F ++K+LV GD ++F+  E  +L +GIR
Sbjct: 222 ILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIR 281

Query: 227 RAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKA 286
           RA      +PSS++S +SM  G++A+A HA      F V + PR+  S+F++   K++  
Sbjct: 282 RAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDV 339

Query: 287 VFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 346
           V + + +VG RF M FE ++ S RR  GTI G+SD  P  W  S WRS++V WDE  +  
Sbjct: 340 V-NNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFP 397

Query: 347 RQPRVSLWEIEPLT 360
           R  +VS W+IE LT
Sbjct: 398 RPNQVSPWDIEHLT 411



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 3/99 (3%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q + TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 558 QSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--ARNQWEI 615

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
            F + E D +L+G+DPW  F +   Y+   S +D  K+ 
Sbjct: 616 AFTNNEEDKMLVGEDPWPEFCNMRGYVASNSKDDPAKVA 654



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 25/40 (62%)

Query: 14 EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV 53
          +G    +  +LW  CAGPL  +P +G +V YFPQGH E V
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELV 57


>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
 gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 546

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 133/340 (39%), Positives = 189/340 (55%), Gaps = 39/340 (11%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 25  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 83

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYF-CKTLTASDTSTHGG 141
               D  TDEVYAQ++L P + E      +     + +++P  YF  K LTASD S  GG
Sbjct: 84  DRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138

Query: 142 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT--GWSVF 199
             +P++ A + FP LD S     Q L+A+DL+  EW F+H+FRG P+RH+ T+  GWSVF
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
            + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
              F V + P                             RM FE ++ S +RY GTI G+
Sbjct: 259 KCMFNVVYKP-----------------------------RMQFEGKDFSEKRYDGTIIGV 289

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           +D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 290 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 328



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 693 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
             KV+  G ++ R++D++    YN+L ++L ++F ++ +     R+ W++VF + E   +
Sbjct: 435 LTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRT--RNQWEIVFTNNEGAEM 492

Query: 752 LLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 797
           L+GDDPW  F +    I I S E+++KM  +  + F P S    +S
Sbjct: 493 LVGDDPWPEFCNMAKRIFICSKEEIKKMKLKN-KFFQPESKALTSS 537


>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 388

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/357 (38%), Positives = 196/357 (54%), Gaps = 42/357 (11%)

Query: 9   CQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNY 68
           C    EG  + ++++LW ACAG + ++P VG  V YFPQGH+EQ  A  +          
Sbjct: 9   CPADGEGQPRSVDAQLWLACAGSMCTVPPVGAAVYYFPQGHAEQATAAVDLSAAC----- 63

Query: 69  PNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN--- 125
             +P  L C++  V   AD  +DEV+A++ L PL      D  V +       +P +   
Sbjct: 64  --VPALLPCRVSAVRFMADAHSDEVFAKIRLVPL---RHGDPAVDVGDAAAQGRPQDDRP 118

Query: 126 ---YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 182
               F KTLT SD +  GGFSVPR  AE +FP+LD+S +PP Q ++ RD+H  E+KFRHI
Sbjct: 119 KPASFAKTLTQSDANNGGGFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHI 178

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 242
           +RG P+RHLLTTGWS FV+ K+L+AGDS++F+ ++  ++ +G+RRA R   V      S 
Sbjct: 179 YRGTPRRHLLTTGWSNFVNQKKLLAGDSIVFLRSDGGEVHVGVRRAKR---VFCDEGHSG 235

Query: 243 DSMHIGLL----AAAAHAAATNSC-----------------FTVFFNPRASPSEFVIPLT 281
              + GL+    A +  AAA                     F V + PRAS  EF +   
Sbjct: 236 WDHYRGLMRGGNAGSGDAAAKGKVPAEDVVAAARLAAAGQPFEVVYYPRASTPEFCV-RA 294

Query: 282 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 337
             V+A    +   GMRF+M FETE+SS +  +MGT+ GI   DP RW  S WR ++V
Sbjct: 295 GAVRAAMQVQWRPGMRFKMAFETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQV 351


>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
          Length = 624

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/392 (36%), Positives = 201/392 (51%), Gaps = 85/392 (21%)

Query: 11  QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 70
           QG   D + L  ELW ACAGPLV LP    RV YF QGH EQ+   T+  + +       
Sbjct: 3   QGAGRDPEELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQ 62

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           +P +++C+       A+ ETDE+YAQ+TLQP   +          L   S+   + FCK 
Sbjct: 63  VPNKILCK-------AETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKI 115

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT SDTSTHGGFSV RR A +  P+LD S+  P QELI +DLH  EW+F+HI+RGQP+RH
Sbjct: 116 LTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRH 175

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           LLTTGWS FV++K+L+AGD+ +++   ++Q ++ + + +             +S  IG  
Sbjct: 176 LLTTGWSTFVTSKKLIAGDAFVYLRLSQSQYIVRLNKYL-------------ESSKIGF- 221

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
                                                      VGMRF+M FE ++  ++
Sbjct: 222 ------------------------------------------DVGMRFKMSFEGDDVPIK 239

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL------TTFPM 364
           ++ GT+    DL P +W  S W+++KV WDE+T      RVS WEIEP        T P+
Sbjct: 240 KFSGTVVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPV 298

Query: 365 YPSLFPLRLKRPWHPSTSSFNDNRDETASGLN 396
            PS   ++ KRP             ETA GL+
Sbjct: 299 QPS---MKNKRP------------RETAEGLD 315



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 683 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q    R+ +KV   G+ V R++D+     Y +L  E+G+MF I+       +  W++
Sbjct: 514 QSHQSCSGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKV 572

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQ 793
            F++ EN+ + +G  PW+ F   V  I I S      +G++G     P  GQ
Sbjct: 573 TFINDENETMEVGAVPWQEFCQMVRKIVIHS------IGDRGHMEACPCLGQ 618


>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
           truncatula]
          Length = 648

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 143/401 (35%), Positives = 203/401 (50%), Gaps = 61/401 (15%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           NK ++ +LWHA AG +V +P V ++V YFPQGH+E      N    S IP++      + 
Sbjct: 25  NKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF------IP 78

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTA 133
           C++  +   A+ ETDEVYA++ L P++  +     D    I +   +K     F KTLT 
Sbjct: 79  CRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVS-ETKDKHQSFAKTLTQ 137

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFS PR  AE +FP LD+S  PP Q++  +D+H  +W FRH++RG PKRHLLT
Sbjct: 138 SDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLT 197

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM--PSSVLSSDSMHIGLLA 251
           TGWS FVS K+L +GDS++F+ +E   L +GIRRA R   V   P S   S S  IG+ A
Sbjct: 198 TGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGS-GIGICA 256

Query: 252 A---------------------------------------------AAHAAATNSCFTVF 266
           A                                             A         F V 
Sbjct: 257 APPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVV 316

Query: 267 FNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPV 325
           + PR+   EF +  T  +      R   GMRF+M  ETE+SS +  ++GT+  +   DP 
Sbjct: 317 YYPRSGTPEFFVK-TSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADP- 374

Query: 326 RWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 366
            WS+S WR ++V WDE    +   RV+ W++E ++  P  P
Sbjct: 375 SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIP 415


>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
 gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
          Length = 1252

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 143/401 (35%), Positives = 203/401 (50%), Gaps = 61/401 (15%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           NK ++ +LWHA AG +V +P V ++V YFPQGH+E      N    S IP++      + 
Sbjct: 25  NKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF------IP 78

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTA 133
           C++  +   A+ ETDEVYA++ L P++  +     D    I +   +K     F KTLT 
Sbjct: 79  CRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVS-ETKDKHQSFAKTLTQ 137

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFS PR  AE +FP LD+S  PP Q++  +D+H  +W FRH++RG PKRHLLT
Sbjct: 138 SDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLT 197

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM--PSSVLSSDSMHIGLLA 251
           TGWS FVS K+L +GDS++F+ +E   L +GIRRA R   V   P S   S S  IG+ A
Sbjct: 198 TGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGS-GIGICA 256

Query: 252 A---------------------------------------------AAHAAATNSCFTVF 266
           A                                             A         F V 
Sbjct: 257 APPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVV 316

Query: 267 FNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPV 325
           + PR+   EF +  T  +      R   GMRF+M  ETE+SS +  ++GT+  +   DP 
Sbjct: 317 YYPRSGTPEFFVK-TSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADP- 374

Query: 326 RWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 366
            WS+S WR ++V WDE    +   RV+ W++E ++  P  P
Sbjct: 375 SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIP 415



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/344 (35%), Positives = 177/344 (51%), Gaps = 43/344 (12%)

Query: 24   LWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVT 83
            LWHA AG +V +P V ++V YFPQGH+E      N    S IP++      + C++ ++ 
Sbjct: 810  LWHAIAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF------IPCRVEDIR 863

Query: 84   MHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHG 140
              A+ ETDEVYA++ L P++  +     D    I +   +K     F KTLT SD +  G
Sbjct: 864  YMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVS-ETKDKHQSFAKTLTQSDANNGG 922

Query: 141  GFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFV 200
            GFS PR  AE +FP +D+S  PP Q +  +D+H  +W FRH++RG PKRHLLTTGWS FV
Sbjct: 923  GFSCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFV 982

Query: 201  SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS----------------------- 237
            S K+L +GDSV+F+ +E  +L +GI R      + P+                       
Sbjct: 983  SDKKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFSEEEDNKLRRNGKG 1042

Query: 238  -SVLSSDSM------HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 290
              +L SD M       +  +  A         F V + PR+   EF +  T  +      
Sbjct: 1043 NGLLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVK-TSLIGITLQI 1101

Query: 291  RVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 333
            R   GMRF+M  ETE+SS +  ++GT+  +   DP  W +S WR
Sbjct: 1102 RWCPGMRFKMPIETEDSSRISWFIGTVASVQAADP-SWPDSLWR 1144


>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
          Length = 202

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 114/204 (55%), Positives = 151/204 (74%), Gaps = 2/204 (0%)

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           AS TSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL
Sbjct: 1   ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 252
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + + SSV+SS SMH+G+LA 
Sbjct: 61  QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
           A HA  T + FTV++ PR S SEF+IP  KY+ +V +   S+G RF+M FE EE+  +R+
Sbjct: 121 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNI-YSIGTRFKMRFEGEEAPEQRF 179

Query: 313 MGTITGISDLDPVRWSNSHWRSVK 336
            GTI G  +LD + W  S WRS+K
Sbjct: 180 TGTIVGSDNLDQL-WPESSWRSLK 202


>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
 gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
          Length = 381

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/355 (38%), Positives = 190/355 (53%), Gaps = 32/355 (9%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E        E+ +       +P  
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           + C++ +V   AD +TDEV+A++ L PL   E  D            +    F KTLT S
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H V W FRHI+RG P+RHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----PPTVMPSSVLSSDSMHIGL- 249
           GWS FV+ K+LVAGDS++F+  +   L +GIRRA R           + L     + GL 
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247

Query: 250 --------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH 289
                               L  AA  A     F V + PRAS  EF +     V+A   
Sbjct: 248 RGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCV-RAAAVRAAMR 306

Query: 290 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 343
            +   GMRF+M FETE+SS +  +MGT+  +   DP+RW  S WR ++V ++  T
Sbjct: 307 VQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVRYNIYT 361


>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
 gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
          Length = 593

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/390 (36%), Positives = 202/390 (51%), Gaps = 42/390 (10%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           LN +LW A AG  V +PTV +RV YFPQGH +Q  +  N      +       P ++C +
Sbjct: 16  LNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQATSLPNNLSPLLLSR-----PYILCSV 70

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
             V   AD +TDEV+A++ LQPL+        +P+ +     +  + F K LT SD +  
Sbjct: 71  SAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIPV-IEADDGERISSFAKILTPSDANNG 129

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSVPR  A+ +FP LD+S+ PP Q L+  D+H + W+FRHI+RG P+RHLLTTGWS F
Sbjct: 130 GGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSKF 189

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           V+AK+LVAGDSV+F+ N +  + +GIRRA+R      SS + SD   + L      +   
Sbjct: 190 VNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICGVRSRVD 249

Query: 260 NS---------------------------------CFTVFFNPRASPSEFVIPLTKYVKA 286
           +                                   F V + PRA  S+FV+   + V A
Sbjct: 250 DEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLK-AEVVDA 308

Query: 287 VFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAG 345
                   GMR +M  ET++SS    + G ++ +S  D   W  S WR + + WDE    
Sbjct: 309 AMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAWRGSPWRMLHITWDEPEVL 368

Query: 346 ERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           +    VS W++E L+T P   + FP  LKR
Sbjct: 369 QTSKWVSPWQVELLSTTPSLHTPFP-PLKR 397


>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 630

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 148/401 (36%), Positives = 211/401 (52%), Gaps = 60/401 (14%)

Query: 10  QQG----HEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH- 64
           QQG     +G    L +ELW ACAG  V +P     V+YFPQGH EQVAA T  + D H 
Sbjct: 7   QQGLLPSKKGVKDSLYTELWRACAGSFVYVPREEETVLYFPQGHLEQVAAYTQHQQDGHM 66

Query: 65  -IPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP 123
            IP Y +LP +++C++ ++ + A+  +DEVYAQ+TL P   ++     V     IPS   
Sbjct: 67  EIPVY-DLPSKILCKIMHIELKAEAFSDEVYAQVTLVPALKQDNLRLEVEENDQIPSITT 125

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 183
           T  F K LT SDTSTHGGFSVP++ A++ FP LD + Q PAQE++A+DL+          
Sbjct: 126 TYTFSKILTPSDTSTHGGFSVPKKHADECFPPLDMTQQTPAQEIVAKDLNGA-------- 177

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--PPTVMPSSVLS 241
                                            E  ++ +GIRRA          SS++S
Sbjct: 178 ---------------------------------ESGEIRVGIRRATEHLSNVSQSSSLIS 204

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
             SM +G+LA+A+HA ++ + F V+++P  +P EF++PL  Y+K+       +GMR +M 
Sbjct: 205 GHSMQLGILASASHAVSSGTMFIVYYHPWTNPFEFIVPLRTYLKSTV-PDYPIGMRVQMQ 263

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIEPLT 360
            E EE S+RR+ GTI G  D+D +RW  S WR +KV WD     +  P RV  W IEPL 
Sbjct: 264 HEVEE-SLRRHAGTIIGHEDIDKIRWPGSEWRCLKVQWDAVLDDKMNPERVCPWWIEPLE 322

Query: 361 T------FPMYPSL-FPLRLKRPWHPSTSSFNDNRDETASG 394
           +       P  P+    L L +   P  SSF  +  + ++G
Sbjct: 323 SAKEKKQVPALPTTKKALALNQRSLPGISSFGMHDGQNSAG 363



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 10/108 (9%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV K G+ +GR++D++RF  Y EL  EL  MF   G   +   SGW +  +D + D
Sbjct: 531 RSCTKVLKLGTALGRAVDLARFHGYTELIAELDSMFEFRGSLINE-SSGWHVTCMDDDGD 589

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 797
           ++ LGD PW+ F   V  + I+ P       ++G  +  PSS    +S
Sbjct: 590 MMQLGDYPWQDFQGVVQKM-IICP-------KEGTNNIKPSSSANPSS 629


>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
          Length = 555

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/347 (36%), Positives = 192/347 (55%), Gaps = 29/347 (8%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G N  L  +LW  CAGPL   P +G           E++  + N E+    P + N+P +
Sbjct: 18  GTNNYLYDQLWKLCAGPLFDPPKIG-----------EELVTSINDELCQLKPVF-NIPSK 65

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           + C + ++ +  +  TDE+YA+++L P + E +    +P      + Q    F K L+AS
Sbjct: 66  IRCNVFSIKLKVETTTDEIYAEISLLPDTSEVE----IPTSKCENNIQNIKCFTKVLSAS 121

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DTS  GGF + +R A +  P LD S   P+QE+ A D+H  EWKF+H  +G PKRHL T+
Sbjct: 122 DTSKKGGFVLNKRHAIECLPPLDMSHLTPSQEINATDIHGHEWKFKHALKGTPKRHLFTS 181

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAI-RPPTVMPSSVLSSDSMHIGLLAAA 253
           GW+ F  AK+LV GDS +F+  E  +  +GI++A       +PSS++S +SMH G++A A
Sbjct: 182 GWNEFAKAKKLVVGDSFIFLRGENGESRVGIKKAAHHQQENIPSSIISKESMHHGVVATA 241

Query: 254 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 313
            +A      F VF+ PR+  S+FV+ + K+   V + + S+G RF M FE ++       
Sbjct: 242 LNAIKNKCMFVVFYKPRS--SQFVVNIDKFRDGV-NKKFSIGSRFLMKFEGKD------- 291

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
                IS+     W +S WR ++V WDE+    R  +VS WEIEPLT
Sbjct: 292 --FNEISERFLPHWKDSEWRCLEVQWDEAATIPRPDKVSPWEIEPLT 336



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 2/88 (2%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           TR+  KV   G++ R++D+S F  YN+L +EL ++F I+GK    + + W++VF++ + D
Sbjct: 443 TRSHTKVRMEGAMERTVDLSIFDGYNQLIDELERLFDIKGKLH--IHNQWKIVFINADGD 500

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQ 777
           ++LLGDDPW  F +    I I S  D +
Sbjct: 501 IMLLGDDPWPKFCNTAEEIFICSKNDAK 528


>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
          Length = 694

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/352 (39%), Positives = 192/352 (54%), Gaps = 48/352 (13%)

Query: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK-QPTNYFCK 129
           +PP ++C++  +   AD E+DEV+A++ L PL  ++          G  +  + T  F K
Sbjct: 100 IPPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHDYGDGQEGNGFETNSEKTPSFAK 159

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 189
           TLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG P+R
Sbjct: 160 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 219

Query: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----PPTVMP-------- 236
           HLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R      P   P        
Sbjct: 220 HLLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPEYSPGWNPIGGS 279

Query: 237 ---SSVLSSDSMH------------IGLLAA-----AAHAAATNSCFTVFFNPRASPSEF 276
              SS+L  D  +             G +AA     AA  A     F V + PRAS SEF
Sbjct: 280 CGYSSLLREDESNSLRRSNCSLADRKGKVAAESVIEAATLAINGRGFEVVYYPRASTSEF 339

Query: 277 VIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSV 335
            +      +A        GMRF+M FETE+SS +  +MGT++ +S  DP+RW NS WR +
Sbjct: 340 CVKALD-ARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLL 398

Query: 336 KVGWDESTAGERQPRVSLWEIE--------PLTTFPMYPSLFPLRLKRPWHP 379
           +V WDE    +   RV+ W +E        PLT+F   P    +RL  P HP
Sbjct: 399 QVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS--PPRKKMRL--PQHP 446



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 34/180 (18%)

Query: 612 VGTENCNTDSQNS----VVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM 667
           +GT  CN D+++     V+FG       L+LP    S   S D   +S   G S   +S 
Sbjct: 541 MGTTPCNDDTESKKSHIVLFG------KLILPEEQISEKGSTDTANTS---GGSKLSSSE 591

Query: 668 YGCMQDSSELLHNVGQIDQLTPTRTFVKVY-KSGSVGRSLDISRFSSYNELREELGQMFG 726
            G     S   H+   ++         KV+ +S  VGR+LD+S   SY EL  +L  MFG
Sbjct: 592 EG--SPCSNKAHDAAGLET-----GHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFG 644

Query: 727 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 786
           I+    + L S   +++ D    +   G++P+  F+     + I++        EQG ES
Sbjct: 645 IQKA--EMLSS---VLYRDASGAIKYAGNEPFSEFLKTARRLTIVT--------EQGSES 691


>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
          Length = 336

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 110/231 (47%), Positives = 152/231 (65%), Gaps = 2/231 (0%)

Query: 145 PRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 204
           PRRAAE  FP LD+  Q P+QEL+A+DLH +EWKFRHI+RGQP+RHLLTTGWS FV+ K+
Sbjct: 1   PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKK 60

Query: 205 LVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFT 264
           LV+GD+VLF+     +L LG+RRA +  T        S  +++  +    +A ++ + F+
Sbjct: 61  LVSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVNAISSTNAFS 120

Query: 265 VFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP 324
           + +NPRAS S F+IP  K+ K + H   S GMRF+M  ETE+++ +R+ G + G+SD+DP
Sbjct: 121 ICYNPRASSSGFIIPYHKFSKTLAHP-FSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDP 179

Query: 325 VRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           VRW  S WR + V WD+     R  RVS WEIEP  + P+  SL     KR
Sbjct: 180 VRWPGSKWRCLLVRWDDLDV-SRHNRVSPWEIEPSGSAPVSSSLVMPSAKR 229


>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
          Length = 336

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 109/231 (47%), Positives = 151/231 (65%), Gaps = 2/231 (0%)

Query: 145 PRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 204
           PRRAAE  FP LD+  Q P+QEL+A+DLH +EWKFRHI+RGQP+RHLLTTGWS FV+ K+
Sbjct: 1   PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKK 60

Query: 205 LVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFT 264
           LV+GD+VLF+     +L LG+RRA +  T        S  +++  +     A ++ + F+
Sbjct: 61  LVSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVKAISSTNAFS 120

Query: 265 VFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP 324
           + +NPRAS S F++P  K+ K + H   S GMRF+M  ETE+++ +R+ G + G+SD+DP
Sbjct: 121 ICYNPRASSSGFILPYHKFSKTLAHP-FSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDP 179

Query: 325 VRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 375
           VRW  S WR + V WD+     R  RVS WEIEP  + P+  SL     KR
Sbjct: 180 VRWPGSKWRCLLVRWDDLDV-SRHNRVSPWEIEPSGSAPVSSSLVMPSAKR 229


>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
 gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
          Length = 603

 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 150/456 (32%), Positives = 214/456 (46%), Gaps = 73/456 (16%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
            D + ++  +W ACAG  V +PT+ +RV YFPQGH EQ + +++      + +     P 
Sbjct: 9   ADLRRVDRRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPV 68

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP----IELGIPSKQPTNY---- 126
           + CQ+  V   AD  TDEVY ++ L P+      D+F P    +E     +Q   Y    
Sbjct: 69  IPCQISAVQFLADPVTDEVYTKLLLFPI------DSFNPSVPVLEHSGNLEQHHGYDYDD 122

Query: 127 -------FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
                  F K LT SD +  GGFSVPR  A+ +FP L++  +PP Q L   D+H + W F
Sbjct: 123 DEDKIVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDF 182

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT------ 233
           RHI+RG P+RHLLTTGWS FV+ K+L+AGDSV+F+ N   ++ +G+RRA+RP        
Sbjct: 183 RHIYRGTPRRHLLTTGWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSDCA 242

Query: 234 --------------------------------VMPSSVLSSDSMHIGLLAAAAHAAATNS 261
                                           V P +V+            A   AA   
Sbjct: 243 RWREQIACFGGGGGDVKMKVKEEGYSRNGRGKVSPEAVME-----------AVERAAQGF 291

Query: 262 CFTVFFNPRAS-PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGI 319
            F V + PRA   S+FV+  T  V        S GMR +M  ETE+SS +  + GTI   
Sbjct: 292 SFEVVYYPRAGWYSDFVV-RTDVVDGALAVCWSAGMRVKMAMETEDSSRMTWFQGTIASA 350

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHP 379
           S  D   W  S WR ++V WDE    +   RVS W++E ++  P     FP   K  +  
Sbjct: 351 SLPDCGLWRGSPWRMLQVAWDEPEVLQNAKRVSPWQVEYVSPSPPLHGAFPPAKKFRFPE 410

Query: 380 STSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 415
           ++    D   E    ++ L   T      +LN+ S 
Sbjct: 411 NSGFLTDGEGELFFPMSGLTNSTMGNINQSLNYHSF 446


>gi|293336069|ref|NP_001170351.1| uncharacterized protein LOC100384328 [Zea mays]
 gi|224035287|gb|ACN36719.1| unknown [Zea mays]
          Length = 326

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/199 (59%), Positives = 144/199 (72%), Gaps = 6/199 (3%)

Query: 586 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 645
           K+  SQ   F  S+SL +S   KD +V  +    D QN  +F   +DSS LL    V + 
Sbjct: 126 KFMGSQSMSFGGSVSL-NSPTSKDGSVDNK-VGRDVQNQSLFSPQVDSSSLLY-NMVPNL 182

Query: 646 TTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGR 704
           T++V D  +S+ P G +   + MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGR
Sbjct: 183 TSNVADNNISAFPSGSTYLQSPMYGCLDDSSGLLQNTGEND--PTTRTFVKVYKSGSVGR 240

Query: 705 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 764
           SLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++
Sbjct: 241 SLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNS 300

Query: 765 VWYIKILSPEDVQKMGEQG 783
           VWYIKILSPEDV KMG+ G
Sbjct: 301 VWYIKILSPEDVHKMGKPG 319


>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
 gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
          Length = 622

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/371 (37%), Positives = 197/371 (53%), Gaps = 38/371 (10%)

Query: 24  LWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVT 83
           +W A AG  V +P VGTRV YFPQGH+E    T+   +       P +P  ++C++ +V 
Sbjct: 15  VWRAIAGNSVKIPPVGTRVYYFPQGHAEHATFTSPAVMS------PGMPAFILCRVLSVR 68

Query: 84  MHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFS 143
             A+ +TDEVYA++ L P+S  E  +  V +      +     F K LT SD +  GGFS
Sbjct: 69  FLAESDTDEVYARIFLHPISQSEVDE--VTMREEEVVEDEIVSFVKILTPSDANNGGGFS 126

Query: 144 VPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAK 203
           VPR  A+ ++P LDF  +PP Q L  RD+  V W+FRHI+RG P+RHLLTTGWS FV++K
Sbjct: 127 VPRFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLTTGWSKFVNSK 186

Query: 204 RLVAGDSVLFI-WNEKNQLLLGIRRAIR----------------------PPTVMPSSVL 240
           +LVAGDS +F+     NQL +G+RRAIR                       P V  S  +
Sbjct: 187 QLVAGDSAVFMRRTANNQLYVGVRRAIRRNDDSQKWTSSFLMREHINNGGSPDV--SWGI 244

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
               M +  +AA A  AA    F V   PR + + FV+   + V+   +   +VGMR +M
Sbjct: 245 RKGRMTMEAVAAVAEKAARGVPFEVSCYPRDAWAGFVVK-AQEVQMALNMPWTVGMRVKM 303

Query: 301 LFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
             E E+SS    Y GT++ +   +   W  S WR +++ W+E    +   RV+ W++E  
Sbjct: 304 AVEAEDSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANRVNPWQVE-- 361

Query: 360 TTFPMYPSLFP 370
             FP  P   P
Sbjct: 362 -CFPPIPQFLP 371


>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
          Length = 588

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 205/369 (55%), Gaps = 33/369 (8%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ +LW+ACAGP  ++P VGT V YFPQGH+E   A  +  + +        PP + C++
Sbjct: 33  VHPQLWYACAGPTCTVPPVGTAVYYFPQGHAEHAGAAADANLHA--------PPFVPCRV 84

Query: 80  HNVTMHADVETDEVYAQMTLQPL-SPEEQKDT----FVPIELGIPSKQPTNYF---CKTL 131
             V   A+++TDE++ ++ L PL S E   D      V  E G   +QPT       KTL
Sbjct: 85  AGVRFMAELDTDEIFVKIRLDPLRSGEPLTDVGEAQVVNDEAG--QRQPTRPVISSAKTL 142

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD+ + G  SV R  AE +FP LD S++ P Q + ARD+H VEW FRH++RG P+R+L
Sbjct: 143 TKSDSYSGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYRGTPERNL 202

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT-------VMPSSVLSSDS 244
           LTTGWS FV++K++V GDSV+F+  E   + +G+RRA R          ++  +   + +
Sbjct: 203 LTTGWSDFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERASRRNAYGRQLVRGNASGTGA 262

Query: 245 MHIGLLAA------AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
              G+L A      A   AA  + F V   PRA+   F + +   ++A+       G+RF
Sbjct: 263 AADGVLRAEDVVAAAVTLAAAGNPFEVVHYPRATAPAFCVRVATVIEAL-QVSWCPGLRF 321

Query: 299 RMLFETEE-SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           +M FE ++ S +  +MGT+ G+   DP RW  S WR ++V WDE        R+S W++E
Sbjct: 322 KMAFEAKDLSRISWFMGTVAGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRLSPWQVE 381

Query: 358 PLTTFPMYP 366
            + T P  P
Sbjct: 382 LVATMPNLP 390


>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
          Length = 451

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 184/310 (59%), Gaps = 10/310 (3%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +GD+  L  E+W AC+G L+ +   G RV YFP+ H EQ+  ++N+E+   +    NLPP
Sbjct: 19  KGDDD-LCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKL-QLSNLPP 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT--FVPIELGIPSKQPTNYFCKTL 131
           +++C++ ++ +  + ET+EVYA+  L P   + +     F P++   P  Q    FCK L
Sbjct: 77  KILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQS---FCKCL 133

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD  ++ G SVP + A K FP LD   + P QELIA+DL   EW+F+H  +GQP+RH 
Sbjct: 134 TQSDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHS 193

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LT GWS FV++K+L+AGD V+F+ +E  +L +GIRR       + +S  S  SM + +LA
Sbjct: 194 LTNGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLA 252

Query: 252 AAAHAAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
            A+HA AT S F V+  P  +  S+F++ ++KY +   H  + VGM  RM  E+E+    
Sbjct: 253 VASHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHG-IGVGMISRMQIESEDYCHV 311

Query: 311 RYMGTITGIS 320
           R    +  IS
Sbjct: 312 RRTNDLEQIS 321


>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
 gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
          Length = 472

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 184/310 (59%), Gaps = 10/310 (3%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +GD+  L  E+W AC+G L+ +   G RV YFP+ H EQ+  ++N+E+   +    NLPP
Sbjct: 19  KGDDD-LCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKL-QLSNLPP 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT--FVPIELGIPSKQPTNYFCKTL 131
           +++C++ ++ +  + ET+EVYA+  L P   + +     F P++   P  Q    FCK L
Sbjct: 77  KILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQS---FCKCL 133

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD  ++ G SVP + A K FP LD   + P QELIA+DL   EW+F+H  +GQP+RH 
Sbjct: 134 TQSDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHS 193

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           LT GWS FV++K+L+AGD V+F+ +E  +L +GIRR       + +S  S  SM + +LA
Sbjct: 194 LTNGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLA 252

Query: 252 AAAHAAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
            A+HA AT S F V+  P  +  S+F++ ++KY +   H  + VGM  RM  E+E+    
Sbjct: 253 VASHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHG-IGVGMISRMQIESEDYCHV 311

Query: 311 RYMGTITGIS 320
           R    +  IS
Sbjct: 312 RRTNDLEQIS 321


>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 103/137 (75%), Positives = 115/137 (83%)

Query: 59  KEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI 118
           K ++S  P +P+L P L+      +   + ETDEVYAQMTLQPLSP+EQKD ++P ELG+
Sbjct: 66  KTLNSRRPPFPSLLPSLLFSFSLHSSFFNFETDEVYAQMTLQPLSPQEQKDAYLPAELGV 125

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           PSKQP+NYFCKTL ASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWK
Sbjct: 126 PSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWK 185

Query: 179 FRHIFRGQPKRHLLTTG 195
           FRHIFRGQPKRHLLTTG
Sbjct: 186 FRHIFRGQPKRHLLTTG 202


>gi|326487181|dbj|BAJ89575.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 449

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 114/199 (57%), Positives = 141/199 (70%), Gaps = 6/199 (3%)

Query: 586 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 645
           K+  SQ   F  S  L SS   KD ++ ++   +D QN  +F   +DSS LL     +  
Sbjct: 249 KFMGSQSLSFGGS-GLLSSPTSKDGSLESK-IGSDVQNQSLFSPQVDSSSLLYNMVPNMA 306

Query: 646 TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPT-RTFVKVYKSGSVGR 704
           +   D  +S++P G +   + MYGC+ DSS +  N G+ D   PT RTFVKVYKSGSVGR
Sbjct: 307 SNVADNSMSTIPSGSTYLQSPMYGCLDDSSGIFQNTGEND---PTSRTFVKVYKSGSVGR 363

Query: 705 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 764
           SLDI+RFS+Y ELREELGQMFGI G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++
Sbjct: 364 SLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNS 423

Query: 765 VWYIKILSPEDVQKMGEQG 783
           VWYIKILSPEDV K+G+QG
Sbjct: 424 VWYIKILSPEDVHKLGKQG 442


>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
          Length = 187

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 97/110 (88%), Positives = 104/110 (94%)

Query: 87  DVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPR 146
           + ETDEVYAQMTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTL ASDTSTHGGFSVPR
Sbjct: 67  NFETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPR 126

Query: 147 RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           RAAEKVFPSLDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTTG+
Sbjct: 127 RAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGY 176


>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
          Length = 648

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/304 (39%), Positives = 181/304 (59%), Gaps = 10/304 (3%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           EGDN  L  E+W AC+G L+ +P +G RV YFP+ H +Q+  ++N E    +    +LP 
Sbjct: 15  EGDN-ALCREIWRACSGSLLDVPKLGERVHYFPRLHMDQLEQSSNLEWIQGL-QLSHLPR 72

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT--FVPIELGIPSKQPTNYFCKTL 131
           +++C++ ++ +  + +T+EVYA+  L P   + +  T  F P+E   P +     FCK L
Sbjct: 73  KILCRVLHIRLLVEHDTEEVYAETILLPNQEQNEPSTPEFCPLE---PPRPQYQSFCKAL 129

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD  ++ G SV R+ A K FP LD   + P QELI  DL   EW+F+H+F+GQP+RHL
Sbjct: 130 TTSDIKSNWGLSVHRKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHVFQGQPRRHL 189

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
           L  GWS FV++K+L+AGD V+F+ +E  +L +GIRR       + SS  S  SM  G+LA
Sbjct: 190 LKHGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQCNSVGSSTFSRQSME-GVLA 248

Query: 252 AAAHAAATNSCFTVFFNPRAS-PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 310
            A+HA AT S F+V++ P  +  S+F++ L+ Y +   H    VG   R    + +S V+
Sbjct: 249 VASHAFATRSLFSVYYKPCYNRSSQFIMSLSNYFEGGNHG-PGVGTISRTQHTSLDSHVK 307

Query: 311 RYMG 314
           R  G
Sbjct: 308 RTSG 311


>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/408 (34%), Positives = 203/408 (49%), Gaps = 46/408 (11%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           L+  LW  CAG  V +PT+ +RV YFPQGH +Q A++  + +   + +     P ++C++
Sbjct: 16  LDPALWLVCAGTTVEIPTLHSRVYYFPQGHFDQ-ASSAPRNLSPLLLS----KPAVLCRV 70

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-----YFCKTLTAS 134
            +V   AD  TDEV+A++ L P++                +   T       F K LTAS
Sbjct: 71  ESVQFLADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTAS 130

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  A+ +FP L+F   PP Q L+  D+H   W+FRHI+RG P+RHLLTT
Sbjct: 131 DANNGGGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTT 190

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR------------------------ 230
           GWS FV+ K+LVAGD V+F+ N    L +GIRRA R                        
Sbjct: 191 GWSTFVNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMRIRVDEEEEEEE 250

Query: 231 --PPTVMPSSVLSSDSMHIGLLAAAAHAAAT-----NSCFTVFFNPRASPSEFVIPLTKY 283
                     V S D    G L+A   A A      N  F V + P+   SEFV+  T+ 
Sbjct: 251 EEEEEEEVREVFSRDGR--GKLSAKVVAEAAELAARNMPFEVVYYPKERWSEFVVK-TEA 307

Query: 284 VKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 342
           V        S G+R ++  ET++SS V    GT++ ++     +W  S WR ++V WDE 
Sbjct: 308 VNEAMKVAWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTWDEP 367

Query: 343 TAGERQPRVSLWEIEPLTTFPMYPSLF-PLRLKRPWHPSTSSFNDNRD 389
              +    VS W++E ++T P   S F P++  +  H S    N  RD
Sbjct: 368 EGLQIAKWVSPWQVELVSTTPALHSAFPPIKRIKAAHDSGVFTNGERD 415


>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
 gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
          Length = 518

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/399 (34%), Positives = 204/399 (51%), Gaps = 66/399 (16%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ ++W ACA PL  LPTVG  V YFP GH+EQ  A        H+P     P    C +
Sbjct: 14  VDRDVWLACAVPLSRLPTVGAEVYYFPHGHAEQCPA--------HLPAPIPAPHLFPCIV 65

Query: 80  HNVTMHADVETDEVYAQMTLQP------------LSPEEQKDTFVPIELGIPSKQP--TN 125
            N+T+ AD +T+EV+A+++L P            + P+    T        P  QP   +
Sbjct: 66  TNLTLGADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSPPHPQPQELS 125

Query: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
           YF K LT SD +  GGFSVPR  A+ +FP+LDF   PP Q L+ RD     W+FRHI+RG
Sbjct: 126 YFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPWQFRHIYRG 185

Query: 186 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS- 244
            P+RHLLTTGWS FV+AK LVAGD V+F+      L++G+RR  R P V P +  ++++ 
Sbjct: 186 TPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPRYPLVFPGADANANAN 245

Query: 245 -------------MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTR 291
                        +    +  AA  AA    FTV + PR +  EFV+P  + V+    TR
Sbjct: 246 QDQQPPPRNARARVPPQDVMEAARLAAEGRPFTVTYFPRQAAGEFVVPRDE-VERALATR 304

Query: 292 VSVGMRFRM-LFETEESSVRRYMGTITGISDLDPVRWSNSH--------WRSVKVGWDES 342
              G   RM + E E++  RR +             W++ H        WR++++ WD+S
Sbjct: 305 WEPGTEVRMQVMEAEDT--RRTV-------------WADGHVKALHQNIWRALEIDWDDS 349

Query: 343 TAGERQPR--VSLWEIEPLTTFPMYPSLFPLRLKRPWHP 379
           +    +    V+ W+++ L  +P  P+   +R+  P  P
Sbjct: 350 SPLSLKLSRFVNAWQVQ-LVAYPPLPNT--VRICDPIAP 385


>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
 gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
          Length = 521

 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/384 (34%), Positives = 197/384 (51%), Gaps = 41/384 (10%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           + S++W  CAGP V++P V ++V YFP GH E    + N +  + I  Y    P   C +
Sbjct: 9   VKSKIWQTCAGPSVNVPKVRSKVYYFPHGHLEHACPSPNPQTITVIDGYG---PSFPCII 65

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
             V + AD  TDEV+A++ L P++  ++    V  E     K  +  F KTLT SD++  
Sbjct: 66  TAVDLLADPHTDEVFAKLLLSPVTEGQEFPEVVDEEDDGGDKFVS--FVKTLTKSDSNNG 123

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSVPR  A+ +FP LD +   P+Q+L   D+HD  WKF H++RG+PKRHL TTGW+ F
Sbjct: 124 GGFSVPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHLFTTGWTPF 183

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLS-----------------S 242
           V+ K+LVAGDS++F+ N    +++GIRR I+       +V +                 S
Sbjct: 184 VNTKKLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGLEVKREGFS 243

Query: 243 DSMHIGLLA-----AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
                G+L       A   A  N  F V + PRA+   FV+     V        + GMR
Sbjct: 244 RGGRRGMLTEKAVIEAVELAEKNLAFEVIYYPRANWCNFVVD-ANVVDDAMKIGWASGMR 302

Query: 298 FRMLFETEESSVRRYM-----GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVS 352
            ++  + +ESS  +       GTI+ +S +        +WR ++V WDE    + Q RV+
Sbjct: 303 VKLPLKIDESSNSKMTFFQPQGTISNVSSV-------PNWRMLQVNWDELEILQNQNRVN 355

Query: 353 LWEIEPLTTFPMYPSLFPLRLKRP 376
            W++E ++  P     F L  K+P
Sbjct: 356 PWQVELISHTPAVHLPF-LSTKKP 378


>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 572

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 194/396 (48%), Gaps = 44/396 (11%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           +++ ++  +W ACAG  V +P + +RV YFPQGH E             I   P+    +
Sbjct: 12  NHRQVDPRIWRACAGASVQIPLLYSRVYYFPQGHVEHCCPL--------ISTLPSSTSPV 63

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTL 131
            C + ++ + AD  TDEV+A + LQP++ E+   T    F   +  +        F K L
Sbjct: 64  PCLITSIQLLADPITDEVFAHLVLQPVTQEQFTPTNYSRFGRYDGDVDDNNKVTTFAKIL 123

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  A+ VFP LDF + PP Q+L   D+H   W FRHI+RG P+RHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRHIYRGTPRRHL 183

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--------------- 236
           LTTGWS FV++K+L+AGDSV+F+    +++ +G+RR     +                  
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYGGDEYNGYYSQ 243

Query: 237 SSVLSSDSMHI---------GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTK 282
           SSV   D             G L A A   A N       F V + P A  SEFV+   +
Sbjct: 244 SSVAKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFEVAYYPTAGWSEFVV-RAE 302

Query: 283 YVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 342
            V++      + G R +M  ETE+SS   +   I   +  +   W  S W+ +++ WDE 
Sbjct: 303 DVESSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEP 362

Query: 343 TAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRP 376
              +   RV+ W++E +       + FP   RLK P
Sbjct: 363 EILQNVKRVNPWQVEIVANATQLHATFPPAKRLKYP 398


>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 139/214 (64%), Gaps = 6/214 (2%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +K L+ +LWHACAG +V +P V ++V YFPQGH+E   +     VD      P +PP ++
Sbjct: 5   DKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSN----VDFGAARIP-IPPLIL 59

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C +  V   AD ETDEV+A++ + PL   E             S++P + F KTLT SD 
Sbjct: 60  CCVAAVKFLADPETDEVFARLRMVPLRNSELDYEDSDGNGAEGSEKPAS-FAKTLTQSDA 118

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+RHLLTTGW
Sbjct: 119 NNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGW 178

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           S FV+ K+LVAGDS++F+  E   L +GIRRA R
Sbjct: 179 SSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKR 212



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 8/133 (6%)

Query: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRR 311
           A   AA+N  F V + PRA+  EF I  T  V+     + S GMRF+M FETE+SS +  
Sbjct: 275 AVTLAASNQPFEVVYYPRANTPEFCI-RTSAVRGAMRIQWSSGMRFKMPFETEDSSRISW 333

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           +MGTI  +  LDP+RW NS WR ++V WDE        RVS W +E ++  P+   L P 
Sbjct: 334 FMGTIASVQLLDPIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVELVSNVPII-HLAPF 392

Query: 372 -----RLKRPWHP 379
                +L+ P HP
Sbjct: 393 SPPRKKLRFPQHP 405


>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
 gi|224030297|gb|ACN34224.1| unknown [Zea mays]
 gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
 gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
 gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
          Length = 513

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 193/384 (50%), Gaps = 67/384 (17%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +  ++ ++W ACA PL  LP VG  V YFP GH+EQ  A        H+P     P    
Sbjct: 15  DSIVDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPA--------HLPAPLPAPHLFP 66

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT---NYFCKTLTA 133
           C +  V++ AD ET+EV+A+++L   SP   +           S  P    +YF K LT 
Sbjct: 67  CTVAGVSLGADDETNEVFAKISL---SPGPHRGPAAACRTDPTSDCPPQELSYFTKELTQ 123

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFSVPR  A+ +FP+LDF   PP Q+L  RD     W+FRHI+RG P+RHLLT
Sbjct: 124 SDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRGTPRRHLLT 183

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------------- 236
           TGWS FV+AK LVAGD V+F+      L++G+RR  R P V P                 
Sbjct: 184 TGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQPPPRN 243

Query: 237 --SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSV 294
             + V   D +       AA  AA    F V + PR +  EF++P  + V+ V  TR   
Sbjct: 244 ARARVPPQDVIE------AARLAAEGRSFAVTYFPRQAAGEFIVPRDE-VEGVLATRWEP 296

Query: 295 GMRFRM-LFETEESSVRRYMGTITGISDLDPVRWSNSH--------WRSVKVGWDEST-- 343
           G + RM + E E++  RR +             W++ H        WR++++ WD+S+  
Sbjct: 297 GAQVRMQVMEAEDT--RRTV-------------WADGHVKSLHQNIWRALEIDWDDSSPL 341

Query: 344 AGERQPRVSLWEIEPLTTFPMYPS 367
           +      V+ W++E L T P  P+
Sbjct: 342 SPNLSRFVNAWQVE-LVTHPPLPN 364


>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 891

 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/290 (43%), Positives = 174/290 (60%), Gaps = 34/290 (11%)

Query: 546 ISPMQNMLGSLP-EGSGNLLNFSGAGPSMLRQQF-PQQSLGSKYEPSQ----VRDFVHSM 599
           +S MQ++LGS   +G+ +LLN  G+ P +    F P+Q       PS     V   V  +
Sbjct: 604 VSTMQSLLGSFSQDGTSHLLNLHGSNPVISSSAFFPKQVAVEPPLPSGTTQCVLPQVEEL 663

Query: 600 SLPSS-----------YNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TT 647
           + P S           + G++ +V       D QN+++FGV+IDSS L+L   +S+  + 
Sbjct: 664 ATPPSNASELSTLLPPFPGREYSV--YQGVADPQNNLLFGVNIDSSSLMLQNGMSNLRSI 721

Query: 648 SVDPGVSSMPLGDSGFHN------------SMYGCMQDSSELLHNVGQIDQLTP-TRTFV 694
             +    SMP     F N            +   C+ D S  L +   ++Q+ P TRTFV
Sbjct: 722 GSENDSVSMPFSTPNFANAPGTDFPLNSDMTTSSCI-DESGFLQSSENLEQVNPPTRTFV 780

Query: 695 KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 754
           KV+K GS GRSLDI++FSSY+ELR ELG+MFG+EG+ EDPLRSGWQLVFVDRENDVLLLG
Sbjct: 781 KVHKLGSFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDRENDVLLLG 840

Query: 755 DDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD 804
           DDPW+ FV+NVWYIKILSP +VQ+MG++G+   +P    R ++ GN   D
Sbjct: 841 DDPWQEFVNNVWYIKILSPLEVQQMGKEGINVPNPIPSHRISNSGNSCDD 890


>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
          Length = 479

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/317 (37%), Positives = 168/317 (52%), Gaps = 59/317 (18%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 21  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 79

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGF 142
               D  TDEVYAQ++L P                                 DT+     
Sbjct: 80  DRKVDKNTDEVYAQISLMP---------------------------------DTT----- 101

Query: 143 SVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG--WSVFV 200
                         D S     Q L+A+DL+  EW F+H+FRG P+RH+ T+G  WSVF 
Sbjct: 102 --------------DMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 147

Query: 201 SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATN 260
           + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T 
Sbjct: 148 TTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTK 207

Query: 261 SCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 320
             F V + P  S S+FVI   K+V A+ +  + VG RFRM FE ++ S +RY GTI G++
Sbjct: 208 CMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDGTIIGVN 264

Query: 321 DLDPVRWSNSHWRSVKV 337
           D+ P  W +S WRS+K+
Sbjct: 265 DMSP-HWKDSEWRSLKI 280



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 4/100 (4%)

Query: 693 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
             KV+  G ++ R++D++    YN+L ++L ++F ++ +     R+ W++VF + E   +
Sbjct: 368 LTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELR--TRNQWEIVFTNNEGAEM 425

Query: 752 LLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSS 791
           L+GDDPW  F +    I I S E+++KM  +  + F P S
Sbjct: 426 LVGDDPWPEFCNMAKRIFICSKEEIKKMKLKN-KFFQPES 464


>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
           [Vitis vinifera]
          Length = 593

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 192/371 (51%), Gaps = 42/371 (11%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAA--TTNKEVDSHIPNYPNLPPQLIC 77
           L+  +W ACAG  V +P V +RV YFPQGH EQ ++    +  V S         P ++C
Sbjct: 12  LDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQASSPPVLSPLVFSK--------PSVLC 63

Query: 78  QLHNVTMHADVETDEVYAQMTLQPL-------SPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           ++  V   AD +TDEV+A++ L+P+       + E ++      +     +     F K 
Sbjct: 64  RVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKI 123

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT+SD +  GGFSVPR  A+ +FP L+F   PP Q L+  DL   +W FRHI+RG P+RH
Sbjct: 124 LTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRH 183

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIRRAIR---------PPTVMPSSVL 240
           LLTTGWS FV+ K+LVAGDSV+F+  N  ++L +G+RR  R           + +  +V 
Sbjct: 184 LLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVK 243

Query: 241 SSDSMHIGLLAAAAHAAATNSC-------------FTVFFNPRASPSEFVIPLTKYVKAV 287
           + +   I   + ++                     F V + PR   S+FV+   + V+  
Sbjct: 244 AKEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVK-AEVVEEA 302

Query: 288 FHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 346
                + GMR +M  ETE+SS    + GT++  + +D   W  S WR ++V WDE    +
Sbjct: 303 LSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQVTWDEPEVLQ 362

Query: 347 RQPRVSLWEIE 357
              RVS W++E
Sbjct: 363 NVMRVSPWQVE 373


>gi|170677574|gb|ACB30859.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677576|gb|ACB30860.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677578|gb|ACB30861.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677580|gb|ACB30862.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677582|gb|ACB30863.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677584|gb|ACB30864.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677586|gb|ACB30865.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677588|gb|ACB30866.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677590|gb|ACB30867.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677592|gb|ACB30868.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677594|gb|ACB30869.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677596|gb|ACB30870.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677598|gb|ACB30871.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677600|gb|ACB30872.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677602|gb|ACB30873.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677604|gb|ACB30874.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677606|gb|ACB30875.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677608|gb|ACB30876.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677610|gb|ACB30877.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677612|gb|ACB30878.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677614|gb|ACB30879.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677616|gb|ACB30880.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677618|gb|ACB30881.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677620|gb|ACB30882.1| ARF8, partial [Arabidopsis thaliana]
          Length = 130

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/130 (74%), Positives = 110/130 (84%), Gaps = 1/130 (0%)

Query: 646 TTSVDPGVSSMPLGDSGFHNSMYGCMQDSS-ELLHNVGQIDQLTPTRTFVKVYKSGSVGR 704
           ++S D   S M L DSGF NS+Y CMQD++ ELLH  GQI+    T+ FVKVYKSGSVGR
Sbjct: 1   SSSGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSGSVGR 60

Query: 705 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 764
           SLDISRFSSY+ELREELG+MF IEG  EDPLRSGWQLVFVD+END+LLLGDDPWE+FV+N
Sbjct: 61  SLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVNN 120

Query: 765 VWYIKILSPE 774
           VWYIKILSPE
Sbjct: 121 VWYIKILSPE 130


>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
          Length = 241

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/227 (47%), Positives = 144/227 (63%), Gaps = 14/227 (6%)

Query: 65  IPNYP-----NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPE-EQK--------DT 110
           IP YP     NL P + C++ +V + AD   DEVYAQ+ L P + + EQK        DT
Sbjct: 15  IPAYPPVVYNNLRPHVFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADT 74

Query: 111 FVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIAR 170
                 G       + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+
Sbjct: 75  EEEDLEGAGKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAK 134

Query: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           DLH + WKFRHI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LG+RRA +
Sbjct: 135 DLHGMGWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQ 194

Query: 231 PPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFV 277
             T        S  +++  +    +A ++ + F + +NPRAS S+F+
Sbjct: 195 AKTCSNYLAPYSQLLNVSGIVDVVNAISSRNAFNICYNPRASSSDFI 241


>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
          Length = 546

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/411 (33%), Positives = 201/411 (48%), Gaps = 49/411 (11%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ ++W ACAG  V +P++ +RV YFPQGH E    +      S I ++    P + C +
Sbjct: 15  VDPQIWRACAGASVQIPSLYSRVYYFPQGHVEHSCPS------SLISSFSTAAP-VPCVV 67

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG------------IPSKQPTNYF 127
             V + AD  TDEV+A + LQP+SPE     F P                  +K     F
Sbjct: 68  SAVELLADPITDEVFAHLALQPISPEH----FSPSNFSGFGSDDDDDNNSNSNKNKVVTF 123

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
            K LT SD +  GGFSVPR  A+ VFP LDF   PP Q+L   D+H V W FRHI+RG P
Sbjct: 124 AKILTPSDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVWDFRHIYRGTP 183

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS--- 244
           +RHLLTTGWS FV+ K+L+AGDSV+F+    +++ +G+RRA  P +              
Sbjct: 184 RRHLLTTGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRA--PISNHGDEYYGGGKKGF 241

Query: 245 --MHIGLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
             + +G L A A + A N       F V + P A  S+FV+   + V+       S G R
Sbjct: 242 RRIGMGKLTAEAVSEAVNKAVQGYPFEVVYYPTAGWSDFVV-RAEDVEVFMAGYWSPGTR 300

Query: 298 FRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 356
            +M  ETE+SS V  + G ++              W+ +++ WDE    +   RV+ W++
Sbjct: 301 VKMAMETEDSSRVTWFQGVVSSTFQ------ETGLWKQLQITWDEPEILQNLKRVNPWQV 354

Query: 357 EPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGL 407
           E +       +++P   +     S S F     E       L  G G+Q +
Sbjct: 355 EVVANSSHLLAIYPPAKRLKPSSSASGFLSGEGEM------LYSGRGQQAV 399


>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 701

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 103/222 (46%), Positives = 145/222 (65%), Gaps = 17/222 (7%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           EG+ K L+ +LWHACAG +V +P + ++V YFPQGH+E           +H   +  LPP
Sbjct: 3   EGE-KVLDPQLWHACAGGMVQMPQMNSKVFYFPQGHAEH----------AHTNIHLRLPP 51

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPS--KQPTNYFC 128
            ++C +  V   A+ ETDEV+A+++L PL   E     D     ++  PS  ++P + F 
Sbjct: 52  FILCNVEAVKFMANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEPSCCEKPAS-FA 110

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   W+FRHI+RG P+
Sbjct: 111 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPR 170

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           RHLLTTGWS FV+ K+LVAGDSV+F+  E   L +GIRRA +
Sbjct: 171 RHLLTTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKK 212



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 5/134 (3%)

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS- 308
           +  A   AA+N  F V + PRAS  EF +  +  V+A    +   GMRF+M FETE++S 
Sbjct: 275 VVEAVTLAASNKPFEVVYYPRASTPEFCVKASA-VRAAMRIQWCSGMRFKMAFETEDASR 333

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM--YP 366
           +  +MGTI  +  +DP+RW NS WR ++V WDE    +   RVS W +E ++  P+  + 
Sbjct: 334 ISWFMGTIASVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFT 393

Query: 367 SLFPLRLK-RPWHP 379
              P R K RP HP
Sbjct: 394 PFSPPRKKLRPQHP 407


>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
          Length = 585

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 193/396 (48%), Gaps = 44/396 (11%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           +++ ++  +W ACAG  V +P + +RV YFPQGH E      +    S  P        +
Sbjct: 12  NHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--------V 63

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTL 131
            C + ++ + AD  TDEV+A + LQP++ ++   T    F   +  +        F K L
Sbjct: 64  PCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSQFGRFDGDVDDNNKVTTFAKIL 123

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  A+ VFP L+F + PP Q+L   D+H   W FRHI+RG P+RHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHL 183

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--------------- 236
           LTTGWS FV++K+L+AGDSV+F+    +++ +G+RR     +                  
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQ 243

Query: 237 SSVLSSDSMHI---------GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTK 282
           SSV   D             G L A A   A N       F V F P A  SEFV+   +
Sbjct: 244 SSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAE 302

Query: 283 YVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 342
            V++      + G R +M  ETE+SS   +   I   +  +   W  S W+ +++ WDE 
Sbjct: 303 DVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEP 362

Query: 343 TAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRP 376
              +   RV+ W++E         + FP   RLK P
Sbjct: 363 EILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYP 398


>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
 gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
 gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
 gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
          Length = 585

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 193/396 (48%), Gaps = 44/396 (11%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           +++ ++  +W ACAG  V +P + +RV YFPQGH E      +    S  P        +
Sbjct: 12  NHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--------V 63

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTL 131
            C + ++ + AD  TDEV+A + LQP++ ++   T    F   +  +        F K L
Sbjct: 64  PCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKIL 123

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  A+ VFP L+F + PP Q+L   D+H   W FRHI+RG P+RHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHL 183

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--------------- 236
           LTTGWS FV++K+L+AGDSV+F+    +++ +G+RR     +                  
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQ 243

Query: 237 SSVLSSDSMHI---------GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTK 282
           SSV   D             G L A A   A N       F V F P A  SEFV+   +
Sbjct: 244 SSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAE 302

Query: 283 YVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 342
            V++      + G R +M  ETE+SS   +   I   +  +   W  S W+ +++ WDE 
Sbjct: 303 DVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEP 362

Query: 343 TAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRP 376
              +   RV+ W++E         + FP   RLK P
Sbjct: 363 EILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYP 398


>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
          Length = 596

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 193/396 (48%), Gaps = 44/396 (11%)

Query: 16  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
           +++ ++  +W ACAG  V +P + +RV YFPQGH E      +    S  P        +
Sbjct: 12  NHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--------V 63

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTL 131
            C + ++ + AD  TDEV+A + LQP++ ++   T    F   +  +        F K L
Sbjct: 64  PCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKIL 123

Query: 132 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
           T SD +  GGFSVPR  A+ VFP L+F + PP Q+L   D+H   W FRHI+RG P+RHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHL 183

Query: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--------------- 236
           LTTGWS FV++K+L+AGDSV+F+    +++ +G+RR     +                  
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQ 243

Query: 237 SSVLSSDSMHI---------GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTK 282
           SSV   D             G L A A   A N       F V F P A  SEFV+   +
Sbjct: 244 SSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAE 302

Query: 283 YVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 342
            V++      + G R +M  ETE+SS   +   I   +  +   W  S W+ +++ WDE 
Sbjct: 303 DVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEP 362

Query: 343 TAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRP 376
              +   RV+ W++E         + FP   RLK P
Sbjct: 363 EILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYP 398


>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
 gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
          Length = 525

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 188/356 (52%), Gaps = 28/356 (7%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPN-YPNLPPQLICQ 78
           ++  +W ACA PL  +P VGT+V YFP+GH+EQ  A         +P+  P+     +C 
Sbjct: 24  IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAP--------LPDPLPSAHRFFLCT 75

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           +  V + AD  T E YA ++L PL  +         EL     Q   Y+ K LT SD + 
Sbjct: 76  ITAVDLSADTTTGEPYATISLLPLRHDAPAPAPAAAELAEAESQEFRYYAKQLTQSDANN 135

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
            GGFSVPR  A+ +FP+L+    PP Q L   DL    W+FRHI+RG P+RHLLTTGWS 
Sbjct: 136 GGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSK 195

Query: 199 FVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           FV+AK+LVAGD+V+F+W      + +LL+G+RRA R      S+  +   +    +  A 
Sbjct: 196 FVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAAR--YSGESACNARGRVQPQEVMEAV 253

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM-LFETEESSVRRYM 313
             AA  + F V + PR    EFV+P  +  K    T    GM+ R  + E E++    ++
Sbjct: 254 RLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKG-LTTPWRCGMQVRAQVMEAEDTRRLAWL 312

Query: 314 -GTITGISDLDPVRWSNSHWRSVKVGWDESTAGE--RQPRVSLWEIEPLTTFPMYP 366
            GT+T +            WR+++V WD S A    +   V+ W+++P+  FP  P
Sbjct: 313 NGTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPV-DFPPLP 360


>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
          Length = 496

 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 103/123 (83%), Positives = 112/123 (91%)

Query: 216 NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSE 275
           NEKNQLLLGIR A RP TVMPS VLSSDSMHI LLAA AHAAATNS FT+FFNPRASP+E
Sbjct: 22  NEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPTE 81

Query: 276 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSV 335
           FVIPL+KY+KA+FHTR+SVGMRFRMLFETEESSVRRYMGTIT +SD DPVRW +S+WRSV
Sbjct: 82  FVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSV 141

Query: 336 KVG 338
           KV 
Sbjct: 142 KVA 144



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/121 (84%), Positives = 111/121 (91%)

Query: 216 NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSE 275
           NEKNQLLLGIR A RP TVMPS VLSSDSMHI LLAA AHAAATNS FT+FFNPRASP+E
Sbjct: 226 NEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPTE 285

Query: 276 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSV 335
           FVIPL+KY+KA+FHTR+SVGMRFRMLFETEESSVRRYMGTIT +SD DPVRW +S+WRSV
Sbjct: 286 FVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSV 345

Query: 336 K 336
           K
Sbjct: 346 K 346


>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
 gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
          Length = 524

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 196/380 (51%), Gaps = 29/380 (7%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ ++W  CAG  V +P + + V YFP GH E +  + N    SH+       P ++C +
Sbjct: 8   VDQKIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPSPNPNTLSHLDRSR---PFILCTV 64

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY----FCKTLTASD 135
             V + AD+ TDEV+ ++ L P++    K    P  L +   +  +     + KTLT SD
Sbjct: 65  SAVDLLADLCTDEVFVKLLLTPVT---NKGVHEPHSLEVREDKDDDKKVVSYSKTLTPSD 121

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
            +  G FSVP   A+ +FP LD + + P QEL   D+H   WKFRH++RG P RHLLTT 
Sbjct: 122 ANNGGAFSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHLLTTD 181

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
           WS FV  KRLV GDS++F+ +    + +G+RR  +      ++ ++  S        A  
Sbjct: 182 WSEFVDKKRLVGGDSLIFMKDSDGNISVGVRRQTK---FGGAAKITEKS-----FTEAVE 233

Query: 256 AAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR--RY 312
            A  N  F V + P A     FV+   K V+   +   S+G+R  +  +  +SS R  ++
Sbjct: 234 LADKNLAFEVVYYPTAKGWCNFVVD-AKVVEDAMNISWSLGVRIELSSKNYDSSKRCSKF 292

Query: 313 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT-TFPMYPSLFPL 371
            GTI+ +S        N  WR ++V WDE    +   RVS WE+E ++  F ++P   P 
Sbjct: 293 EGTISALSA------PNCPWRMLEVKWDEPKVSQVPERVSPWEVETISDIFALHPQFHPT 346

Query: 372 RLKRPWHPSTSSFNDNRDET 391
           +  +   P +++F+D + ++
Sbjct: 347 KKLKKSDPDSAAFSDKKGDS 366


>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
          Length = 546

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 201/396 (50%), Gaps = 50/396 (12%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           ++ ++ ++W ACAG  V +P + +RV Y+PQGH E    +++    S I           
Sbjct: 11  HRVIDPKIWRACAGASVKIPALFSRVYYYPQGHVEHCCPSSSAVTASPI----------A 60

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP---IELGIPSKQPTNYFCKTLTA 133
           C + ++ + AD  TDEV+A +TL P + ++Q   F P    E    S++    F K LTA
Sbjct: 61  CVVSSIDLLADPITDEVFAHLTLHPAAAQDQFQ-FPPQSRFEEEDESEKVVT-FAKVLTA 118

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFSVPR  A+ VFP LDF   PP Q+L   D+H   W FRHI+RG P+RHLLT
Sbjct: 119 SDANNGGGFSVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPRRHLLT 178

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD---------- 243
           TGWS FV++K+L+ GDSV+F+    +++ +G+RRA        SS    +          
Sbjct: 179 TGWSKFVNSKKLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSSYYGDEYFPGGYYGVK 238

Query: 244 ---------SMHIGLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTKYVKAVFH 289
                     + +G L A A + A         F V + P A  SEFV+   + V+A  +
Sbjct: 239 KEDGGEKFRRVGMGKLTAEAVSEAIGKASRGLPFEVVYYPTAGWSEFVV-RAEDVEASTN 297

Query: 290 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 348
              + G R +M  ETE+SS +  + G ++              W+ +++ WDE    +  
Sbjct: 298 VYWTPGTRVKMAMETEDSSRITWFQGIVSAT--------FQETWKQLQITWDEPEILQNL 349

Query: 349 PRVSLWEIEPLT-TFPMYPSLFPLRLKRPWHPSTSS 383
            RV+ W++E +T +     + +P   KR  +P  SS
Sbjct: 350 KRVNPWQVEAVTASSTQLHATYPPPPKRSKYPHASS 385


>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 529

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/368 (37%), Positives = 187/368 (50%), Gaps = 28/368 (7%)

Query: 21  NSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLH 80
           + ++W ACA PL  +P VG++V YFP GHSEQ    T     +H     NL P   C + 
Sbjct: 24  DRDVWLACATPLSRVPVVGSQVYYFPHGHSEQC--PTPPRAPAH-----NLFP---CTVA 73

Query: 81  NVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP-IELGIPSKQPTNYFCKTLTASDTSTH 139
            V + AD +TDE +A ++L P  P       +P      P      Y+ K LT SD +  
Sbjct: 74  AVRLFADPKTDEPFATVSLVP-GPHRAPAPDLPHASARRPEPTAFRYYAKQLTQSDANNG 132

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
           GGFSVPR  AE VFP LDF   PP Q L   D     W FRHI+RG P+RHLLTTGWS F
Sbjct: 133 GGFSVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTTGWSKF 192

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM---PSSVLSSDSMHIGL--LAAAA 254
           V+AK LVAGD+V+F+     +LL GIRRA R P V    P     +    +    +  A 
Sbjct: 193 VNAKLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRNARARVPPQEVDDAV 252

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314
             AA  + FTV + PR    EFV+P  +  +A+       G++ RM F   E     ++ 
Sbjct: 253 RLAAEGAPFTVTYYPRQGAGEFVVPKQEVEEALVGA-WRPGVQVRMKFLDAEERRSEWIN 311

Query: 315 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374
            +  +  +DP     + WR +++ W ES AG     V+ W++E +   P+   L  L++ 
Sbjct: 312 GV--VKAVDP-----NIWRMLEINWAESVAGSLNRYVNAWQVEHVGHPPI---LKKLKIS 361

Query: 375 RPWHPSTS 382
              HP  S
Sbjct: 362 EVHHPLCS 369


>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
          Length = 502

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/354 (36%), Positives = 181/354 (51%), Gaps = 24/354 (6%)

Query: 19  CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
            ++ ++W ACA PL  LP VG +V YFP GHSEQ        +      +P+L P   C 
Sbjct: 10  VVDRDVWLACATPLSRLPAVGAQVYYFPHGHSEQCPTALAAPLP-----HPHLFP---CT 61

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           +  V + AD  TDE +A ++L P  P        P     P+     ++ K LT SD + 
Sbjct: 62  VAAVALSADPSTDEPFATISLVP-GPHRALGGGAPHHAVDPA---FAHYAKQLTQSDANN 117

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198
            GGFSVPR  A+ VFP LDF   PP Q L  RDL    W+FRHI+RG P+RHLLTTGWS 
Sbjct: 118 GGGFSVPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLLTTGWSR 177

Query: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM-PSSVLSSDSMHIGL--LAAAAH 255
           FV+AK LVAGD+V+F+     +LL G+RR  R P    P+    +    +    +  AA 
Sbjct: 178 FVNAKLLVAGDAVVFMRRPDGELLAGVRRTPRYPVSQDPAEPPRNARARVPAQEVEDAAR 237

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 315
            AA  + FTV + PR    EFV+P  K V+    +    G + RM F   E     ++  
Sbjct: 238 RAAQGAPFTVTYYPRQGAGEFVVP-RKEVEDALISPWEPGTQVRMQFLHPEDRRSEWING 296

Query: 316 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR-VSLWEIEPLTTFPMYPSL 368
           +    D       +S WR +++ WDES     + R V+ W+++ +   P+   L
Sbjct: 297 VVRAVD-------HSIWRMLEIDWDESAPPSLKNRHVNAWQVQLVGCPPLLKRL 343


>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
 gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
          Length = 698

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 139/218 (63%), Gaps = 13/218 (5%)

Query: 17  NKCL-NSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 75
            +CL + +LWHACAG +V +P V +RV YFPQGH+E      + ++ +       +P  +
Sbjct: 17  GRCLVDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-----RVPALV 71

Query: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTA 133
           +C++  V   AD +TDEV A++ L P+ P E    D   P   G    +P + F KTLT 
Sbjct: 72  LCRVDAVRFLADPDTDEVLARVRLAPVRPNEPDHADAAAP---GAREDKPAS-FAKTLTQ 127

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+RHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 187

Query: 194 TGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIRRAIR 230
           TGWS FV+ KRLVAGDS++F+       L +GIRRA +
Sbjct: 188 TGWSAFVNQKRLVAGDSIVFMRTGGTGDLCVGIRRAKK 225



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)

Query: 290 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 348
           T+   GMRF+M FETE+SS +  +MGT+  +   DP+RW NS WR ++V WDE    +  
Sbjct: 314 TQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDLLQNV 373

Query: 349 PRVSLWEIEPLTTFPMYPSLFPL 371
            RVS W +E +++ P    L P 
Sbjct: 374 KRVSPWLVELVSSTPAIHHLTPF 396


>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
 gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
          Length = 550

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 184/373 (49%), Gaps = 44/373 (11%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV--AATTNKEVDSHIPNYPNLPPQLIC 77
           ++  LW A +G    + TVG+ V YF QGH EQ     T ++ V S+        P   C
Sbjct: 2   MDPNLWRAFSGNSAHIHTVGSEVYYFVQGHLEQATYVPTLSRSVLSN--------PITKC 53

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTLTA 133
            +      AD  +DEV  ++ L P+ P +        F   + G   +     F K LT+
Sbjct: 54  IVSAADYTADPLSDEVCLKLNLNPIPPGQSVSQVVHPFSSCDDGNGQRNRIEKFAKVLTS 113

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
           SD +  GGFSVPR  A+ +FP L++ ++PP Q L   D+H V W FRHI+RG P+RHLLT
Sbjct: 114 SDANNGGGFSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLT 173

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD---------- 243
           TGWS FV+ K+L+AGD+V+F  +    + +GIRR+ +       S  +S           
Sbjct: 174 TGWSKFVNNKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRCNVE 233

Query: 244 -------------SMHIG-----LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVK 285
                          +IG      +A AA  AA    F V + PR   SEFVIP  K V 
Sbjct: 234 EKRSGDRSTDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRIGTSEFVIPAEK-VN 292

Query: 286 AVFHTRVSVGMRFRMLFETEES-SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 344
              + +   G+R +M  ETE+S   + Y GT+T  S      W  S WR ++V W+E+ A
Sbjct: 293 NSLNYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDA 352

Query: 345 GERQPRVSLWEIE 357
            +    VS WE+E
Sbjct: 353 LQSAKFVSPWEVE 365


>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
 gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
 gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 529

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/360 (35%), Positives = 187/360 (51%), Gaps = 32/360 (8%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPN-YPNLPPQLICQ 78
           ++  +W ACA PL  +P VGT+V YFP+GH+EQ  A         +P+  P+     +C 
Sbjct: 24  IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAP--------LPDPLPSAHRFFLCT 75

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS----KQPTNYFCKTLTAS 134
           +  V + AD  T E YA ++L PL  +       P            Q   Y+ K LT S
Sbjct: 76  ITAVDLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQS 135

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           D +  GGFSVPR  A+ +FP+L+    PP Q L   DL    W+FRHI+RG P+RHLLTT
Sbjct: 136 DANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTT 195

Query: 195 GWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 250
           GWS FV+AK+LVAGD+V+F+W      + +LL+G+RRA R      S+  +   +    +
Sbjct: 196 GWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAAR--YSGESACNARGRVQPQEV 253

Query: 251 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM-LFETEESSV 309
             A   AA  + F V + PR    EFV+P  +  K    T    GM+ R  + E E++  
Sbjct: 254 MEAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKG-LTTPWRCGMQVRAQVMEAEDTRR 312

Query: 310 RRYM-GTITGISDLDPVRWSNSHWRSVKVGWDESTAGE--RQPRVSLWEIEPLTTFPMYP 366
             ++ GT+T +            WR+++V WD S A    +   V+ W+++P+  FP  P
Sbjct: 313 LAWLNGTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPV-DFPPLP 364


>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
 gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
          Length = 460

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 195/376 (51%), Gaps = 19/376 (5%)

Query: 18  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
           K ++ E+W   AGP   +P + ++V YFP GH E    + N E  S I +Y    P + C
Sbjct: 7   KRVDREIWQCLAGPSFKIPKLNSQVFYFPLGHLEHACPSPNTEALSLINSYR---PIIPC 63

Query: 78  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP-IELGIPSKQPTNYFCKTLTASDT 136
            + +V + AD++TDEV+A++ L P++ +   +   P +           +  KTLT SD 
Sbjct: 64  VVSDVDLLADLQTDEVFAKLILTPITNDSVHEPQEPEVRENEHGGDRLVFSGKTLTQSDA 123

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           +  G FSVP   A+ +FP LD +   P+Q L  +D+H+  W FRH +RG PKRHL+TT W
Sbjct: 124 NNGGAFSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLITTKW 183

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
           S FV  K+++ GDS++ +   K++    I   IR   +  ++ ++  S     +  AA  
Sbjct: 184 SKFVDTKKIIGGDSLVLMKISKDKDKDKIFIGIRRHKLSAAAKITEKS-----VMEAAEL 238

Query: 257 AATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR--YM 313
           A  N  F V + P AS    FV+   + VK         GMR +   +T+ESS R   + 
Sbjct: 239 ADKNMTFEVIYYPTASHWCNFVVD-AEAVKKAMQINWQSGMRVKHCLKTDESSKRSSIFQ 297

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 373
           GT++ +SD      S+  WR ++V WDES   +   +VS W+IE ++  P  P  FP + 
Sbjct: 298 GTVSALSDP-----SHHPWRMLQVNWDESEVSQNPSQVSPWQIELISHTPALPLQFPPQK 352

Query: 374 K-RPWHPSTSSFNDNR 388
           K R  H S  S N  R
Sbjct: 353 KLRIAHVSALSTNIER 368


>gi|304308101|gb|ADL70363.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 185/326 (56%), Gaps = 58/326 (17%)

Query: 406 GLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP 462
           GL  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P
Sbjct: 1   GLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEP 60

Query: 463 -FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM--------- 505
             QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M         
Sbjct: 61  HHQYLQQSASHNSDLMLQQQQQQQATRHLM-----HAQTQIMSENLPQQNMRQEVSNQPA 115

Query: 506 -------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQN 551
                        Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP   
Sbjct: 116 RQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA-- 173

Query: 552 MLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAA 611
                  G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A
Sbjct: 174 ------SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLA 223

Query: 612 VGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGC 670
           +   N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y C
Sbjct: 224 LEPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSC 278

Query: 671 MQDSS-ELLHNVGQIDQLTPTRTFVK 695
           MQD++ ELLH  GQI+    T+ FVK
Sbjct: 279 MQDTTHELLHGAGQINSSNQTKNFVK 304


>gi|304308091|gb|ADL70358.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 185/326 (56%), Gaps = 58/326 (17%)

Query: 406 GLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP 462
           GL  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P
Sbjct: 1   GLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEP 60

Query: 463 -FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM--------- 505
             QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M         
Sbjct: 61  HHQYLQQSASHNSDLMLQQQQQQQATRHLM-----HAQTQIMSENLPQQNMRQEVSNQPA 115

Query: 506 -------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQN 551
                        Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP   
Sbjct: 116 GQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA-- 173

Query: 552 MLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAA 611
                  G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A
Sbjct: 174 ------SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLA 223

Query: 612 VGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGC 670
           +   N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y C
Sbjct: 224 LEPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSC 278

Query: 671 MQDSS-ELLHNVGQIDQLTPTRTFVK 695
           MQD++ ELLH  GQI+    T+ FVK
Sbjct: 279 MQDTTHELLHGAGQINSSNQTKNFVK 304


>gi|298111082|gb|ADB96361.2| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308083|gb|ADL70354.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308085|gb|ADL70355.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308089|gb|ADL70357.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308097|gb|ADL70361.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308099|gb|ADL70362.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 185/326 (56%), Gaps = 58/326 (17%)

Query: 406 GLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP 462
           GL  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P
Sbjct: 1   GLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEP 60

Query: 463 -FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM--------- 505
             QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M         
Sbjct: 61  HHQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPA 115

Query: 506 -------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQN 551
                        Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP   
Sbjct: 116 GQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA-- 173

Query: 552 MLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAA 611
                  G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A
Sbjct: 174 ------SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLA 223

Query: 612 VGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGC 670
           +   N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y C
Sbjct: 224 LEPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSC 278

Query: 671 MQDSS-ELLHNVGQIDQLTPTRTFVK 695
           MQD++ ELLH  GQI+    T+ FVK
Sbjct: 279 MQDTTHELLHGAGQINSSNQTKNFVK 304


>gi|304308103|gb|ADL70364.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 185/326 (56%), Gaps = 58/326 (17%)

Query: 406 GLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP 462
           GL  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P
Sbjct: 1   GLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEP 60

Query: 463 -FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM--------- 505
             QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M         
Sbjct: 61  HHQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPA 115

Query: 506 -------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQN 551
                        Y +A +++   L Q +QQS +PSPSF K++F DS+ + + + SP   
Sbjct: 116 GQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSNNKFATTASPA-- 173

Query: 552 MLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAA 611
                  G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A
Sbjct: 174 ------SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLA 223

Query: 612 VGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGC 670
           +   N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y C
Sbjct: 224 LEPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSC 278

Query: 671 MQDSS-ELLHNVGQIDQLTPTRTFVK 695
           MQD++ ELLH  GQI+    T+ FVK
Sbjct: 279 MQDTTHELLHGAGQINSSNQTKNFVK 304


>gi|298111078|gb|ADB96359.2| auxin response factor 8 [Arabidopsis thaliana]
          Length = 303

 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 184/325 (56%), Gaps = 58/325 (17%)

Query: 407 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP- 462
           L  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P 
Sbjct: 1   LLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPH 60

Query: 463 FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM---------- 505
            QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M          
Sbjct: 61  HQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAG 115

Query: 506 ------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNM 552
                       Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP    
Sbjct: 116 QQQQLQQSDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--- 172

Query: 553 LGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAV 612
                 G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A+
Sbjct: 173 -----SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLAL 223

Query: 613 GTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCM 671
              N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CM
Sbjct: 224 EPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCM 278

Query: 672 QDSS-ELLHNVGQIDQLTPTRTFVK 695
           QD++ ELLH  GQI+    T+ FVK
Sbjct: 279 QDTTHELLHGAGQINSSNQTKNFVK 303


>gi|298111076|gb|ADB96358.2| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308079|gb|ADL70352.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308081|gb|ADL70353.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308087|gb|ADL70356.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308093|gb|ADL70359.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308095|gb|ADL70360.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 303

 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 184/325 (56%), Gaps = 58/325 (17%)

Query: 407 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP- 462
           L  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P 
Sbjct: 1   LLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPH 60

Query: 463 FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM---------- 505
            QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M          
Sbjct: 61  HQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAG 115

Query: 506 ------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNM 552
                       Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP    
Sbjct: 116 QQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--- 172

Query: 553 LGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAV 612
                 G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A+
Sbjct: 173 -----SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLAL 223

Query: 613 GTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCM 671
              N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CM
Sbjct: 224 EPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCM 278

Query: 672 QDSS-ELLHNVGQIDQLTPTRTFVK 695
           QD++ ELLH  GQI+    T+ FVK
Sbjct: 279 QDTTHELLHGAGQINSSNQTKNFVK 303


>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 119

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 88/98 (89%), Positives = 93/98 (94%)

Query: 97  MTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL 156
           MTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTL ASDTSTHGGFSVPRRAAEKVFPSL
Sbjct: 1   MTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPSL 60

Query: 157 DFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
           DFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 61  DFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 98


>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
          Length = 624

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 192/400 (48%), Gaps = 71/400 (17%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAA--TTNKEVDSHIPNYPNLPPQLIC 77
           L+  +W ACAG  V +P V +RV YFPQGH EQ ++    +  V S         P ++C
Sbjct: 12  LDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQASSPPVLSPLVFSK--------PSVLC 63

Query: 78  QLHNVTMHADVETDEVYAQMTLQPL-------SPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           ++  V   AD +TDEV+A++ L+P+       + E ++      +     +     F K 
Sbjct: 64  RVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKI 123

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 190
           LT+SD +  GGFSVPR  A+ +FP L+F   PP Q L+  DL   +W FRHI+RG P+RH
Sbjct: 124 LTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRH 183

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIRRAIR---------PPTVMPSSVL 240
           LLTTGWS FV+ K+LVAGDSV+F+  N  ++L +G+RR  R           + +  +V 
Sbjct: 184 LLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVK 243

Query: 241 SSDSMHIGLLAAAAHAAATNSC-------------FTVFFNPRASPSEFVIPLTKYVKAV 287
           + +   I   + ++                     F V + PR   S+FV+   + V+  
Sbjct: 244 AKEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVK-AEVVEEA 302

Query: 288 FHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR------------- 333
                + GMR +M  ETE+SS    + GT++  + +D   W  S WR             
Sbjct: 303 LSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQTWSYLQDTKM 362

Query: 334 ----------------SVKVGWDESTAGERQPRVSLWEIE 357
                            VKV WDE    +   RVS W++E
Sbjct: 363 RSLIVTFFSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVE 402


>gi|293332071|ref|NP_001169029.1| uncharacterized protein LOC100382863 [Zea mays]
 gi|223974533|gb|ACN31454.1| unknown [Zea mays]
          Length = 122

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 92/117 (78%), Positives = 103/117 (88%), Gaps = 2/117 (1%)

Query: 667 MYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 726
           MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLDI+RFS+Y ELREELGQMFG
Sbjct: 1   MYGCLDDSSGLLQNTGEND--PTTRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFG 58

Query: 727 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           I+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWYIKILSPEDV KMG+ G
Sbjct: 59  IKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPG 115


>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 551

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 185/355 (52%), Gaps = 29/355 (8%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ ++W ACAG  V +P + +RV YFPQGH E   A+ +  +   I + P +P    C +
Sbjct: 9   VDPKIWRACAGAAVQIPKLHSRVYYFPQGHMEH--ASPSHYLSPLIRSLPFVP----CHV 62

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQ-------KDTFVPIELGIPSKQPTNYFCKTLT 132
            ++   AD  +DEV+A+  L PLS  +Q       K+     +           F K LT
Sbjct: 63  SSLDFLADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILT 122

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
            SD +  GGFSVPR  A+  FP LDF   PP Q L   D+H VEW+FRHI+RG P+RHL 
Sbjct: 123 PSDANNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHLF 182

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------PPTVMPSSVLSSDSM 245
           TTGWS FV+ K+LVAGD+V+F+ +    + +GIRRA R       PP         S + 
Sbjct: 183 TTGWSKFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPAEREGFSRSTTG 242

Query: 246 HIGLLAAAAHAAATNSC--FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 303
            +   A AA A +      F V + PR   ++FV+   + V+         GMR ++  E
Sbjct: 243 RVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVS-AEVVEESMKCAWVGGMRVKISME 301

Query: 304 TEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
           TE+SS +  Y GT++     +     N  WR ++V WDE    +   +VS W++E
Sbjct: 302 TEDSSRMTWYQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKQVSPWQVE 351


>gi|298111080|gb|ADB96360.2| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 184/326 (56%), Gaps = 58/326 (17%)

Query: 407 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP- 462
           L  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GD +RQQF+QLQ+P 
Sbjct: 1   LLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDLLRQQFVQLQEPH 60

Query: 463 FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM---------- 505
            QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M          
Sbjct: 61  HQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAG 115

Query: 506 ------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNM 552
                       Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP    
Sbjct: 116 QQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--- 172

Query: 553 LGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAV 612
                 G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A+
Sbjct: 173 -----SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLAL 223

Query: 613 GTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCM 671
              N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CM
Sbjct: 224 EPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCM 278

Query: 672 QDSS-ELLHNVGQIDQLTPTRTFVKV 696
           QD++ ELLH  GQI+    T+ FVKV
Sbjct: 279 QDTTHELLHGAGQINSSNQTKNFVKV 304


>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
          Length = 330

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 180/357 (50%), Gaps = 76/357 (21%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           +  +LW  CAGPL  +P +G +V YFPQGH E V A+T +E++   PN  +LP +L C++
Sbjct: 1   MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPSKLQCRV 59

Query: 80  HNVTMHADVETDEVYAQMTLQP----------LSPEEQKDTFVPIELGIPSKQPTNYFCK 129
             + +  +  +DE Y ++TL P          + P E ++ F PI          N F K
Sbjct: 60  IAIHLKVENNSDETYVEITLMPDTTVSKNLQVVIPTENENQFRPI---------VNSFTK 110

Query: 130 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSL----QP-PAQELIARDLHDVEWKFRHIFR 184
            LTASDTS  G FSVP + A +  P L F      QP PAQELIA DLH  +W+F+H +R
Sbjct: 111 VLTASDTSAQGEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYR 170

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
                                  GD ++F                        +  + +S
Sbjct: 171 -----------------------GDVIVF------------------------ARYNIES 183

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           M  G++A+A HA      F + + PR+  S++++   K++ AV + + +VG ++ M FE 
Sbjct: 184 MRHGVIASAKHAFDNQCMFIMVYKPRS--SQYIVSHEKFLDAV-NNKFNVGSKYTMRFED 240

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361
           ++ S  RY GTI GISD  P  W  S WRS++V WDE  +  R  +VS W+I+ L +
Sbjct: 241 DDLSETRYFGTIIGISDFSP-HWKCSEWRSLEVQWDEFASFPRPKKVSPWDIKHLMS 296


>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
 gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
          Length = 695

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 178/375 (47%), Gaps = 50/375 (13%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
            G +  ++  LW ACAG + ++P VG  V YFPQGH+E         VD  +P      P
Sbjct: 42  RGRDVDVHPRLWQACAGSMRAVPPVGAAVYYFPQGHAEHAGGAA---VDLRVP------P 92

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPL---SPEEQKDTFVPIELGIPSKQPTNY---- 126
            + C++  V + AD +TD+VYA++ L PL    P         ++    S+   +     
Sbjct: 93  FVPCRVAAVRLMADPDTDDVYARIRLVPLRAWEPVADVGDAALVKTDGSSRGGADGDGDG 152

Query: 127 --------------FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDL 172
                         F KTLT SD +  GGFSVPR  A  +FP LD+S  PP Q + ARD+
Sbjct: 153 DAGGGQQQQPRPLSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQFVSARDV 212

Query: 173 HDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPP 232
           H VEW FRHI+R  P+R LL  G  +   AKR       +F          G+  A+  P
Sbjct: 213 HGVEWTFRHIYRSTPRRTLLNPGCRL-RRAKR-------VFCRRGGGGSNAGV--AVAGP 262

Query: 233 TVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRV 292
           +     V + D +    LAAA         F V   PRAS  EFV+     VK       
Sbjct: 263 SD--GKVPAEDVVEAARLAAAGQP------FEVVHYPRASAPEFVV-RAAAVKESMQAPW 313

Query: 293 SVGMRFRMLFETEE-SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRV 351
             G+RF+M FETE+ S +  +MGTI G+   DP RW  S WR ++V WDE        RV
Sbjct: 314 CPGLRFKMAFETEDLSRISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELLRNVNRV 373

Query: 352 SLWEIEPLTTFPMYP 366
             W +E +++ P  P
Sbjct: 374 CPWRVELVSSMPKLP 388



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S ++GR+LD+S  SS+ EL   L   FGI       LRS   +V+     +V  
Sbjct: 612 CKVFVESDTLGRNLDLSALSSFEELCARLSSFFGINNA---DLRS--HMVYRTIAGEVKH 666

Query: 753 LGDDPWEAFVSNVWYIKILS 772
           +GD+P+  FV +   I IL+
Sbjct: 667 VGDEPFSVFVKSARRITILT 686


>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
           vinifera]
          Length = 247

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 127/218 (58%), Gaps = 45/218 (20%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHAC  PLV++P    RV YFPQGH E + A+ ++E+D  +P++ NLP +++
Sbjct: 33  NIALYKELWHACTXPLVNIPHEXERVYYFPQGHMEXLEASMHQELDQKMPSF-NLPSKIL 91

Query: 77  CQ----LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 132
           C+    +HN  +H                                         FCKTLT
Sbjct: 92  CKXVNFIHNCIVHP----------------------------------------FCKTLT 111

Query: 133 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
           ASDTSTHGGFSV RR  ++  P LD S  PP QEL+A+D+H  E  FRHIF+GQP+ HLL
Sbjct: 112 ASDTSTHGGFSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPFRHIFQGQPRCHLL 171

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           TTGWSVFVS KRL  GD+++F+  E  +L +G+RR  R
Sbjct: 172 TTGWSVFVSTKRLAVGDALIFLRKENGELCVGVRRLTR 209


>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
          Length = 540

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 171/344 (49%), Gaps = 51/344 (14%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  LN +L   CAGPL   P VG           E++  + N E+    P + ++P ++ 
Sbjct: 20  NNYLNGQLLKLCAGPLFDTPKVG-----------EKLVTSINDELCQLKPIF-DIPSKIC 67

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C + ++ +  +  T+++YA++ L P    +  D  +PI     + Q  NYF K L+ASDT
Sbjct: 68  CNVFSINLKVENNTNDIYAEVALLP----DTSDVEIPIPKNENNIQNINYFTKVLSASDT 123

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
              GGF + +R A +  P LD S   P+QE+IA+D+H  +W F+H  RG           
Sbjct: 124 CKTGGFVLYKRHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKHTLRG----------- 172

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 256
                               E  +  +GI RA      +P+S +S  SMH G++A A + 
Sbjct: 173 --------------------ENGESRVGISRAAHQERNIPTSSISKQSMHHGVVATALNT 212

Query: 257 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 316
                 F VF+ PR+  S+F++   K+V  V + + S+G +F M FE ++ +  RY GTI
Sbjct: 213 IKNKCMFVVFYKPRS--SQFLVNFDKFVDRV-NNKFSIGSKFSMKFEGKDLNETRYNGTI 269

Query: 317 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
            G+ D     W +S WRS+KV WD +    R  +VS WEIE LT
Sbjct: 270 VGVGDF-STHWKDSEWRSLKVQWDGTATIPRPDKVSPWEIEMLT 312



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 683 QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 742
           +ID +   R+  KV+  G + R++D++ F  Y++L +EL ++F I+G+    + + W++ 
Sbjct: 422 KIDHVQ-ARSHTKVHMEGVIERTVDLTIFDGYSQLIDELERLFDIKGELH--MHNKWKMF 478

Query: 743 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 777
           F+  + D+++LGDDPW  F      I I S + V+
Sbjct: 479 FIYDDGDMMILGDDPWTKFCYMAKEIFICSKKGVK 513


>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
 gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
 gi|224031343|gb|ACN34747.1| unknown [Zea mays]
 gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
 gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
          Length = 462

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 185/381 (48%), Gaps = 59/381 (15%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  ++ ++W ACA PL  LPTVG  V YFP GH+EQ  A        H+P     P    
Sbjct: 15  NSIVDRDVWLACAAPLSRLPTVGDDVYYFPDGHAEQCPA--------HLPAPLPAPHFFP 66

Query: 77  CQLHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           C + ++++ AD +TDEV+A+++L+P L+   + D   P     P ++P +Y  K L+ SD
Sbjct: 67  CTVTDISLGADDKTDEVFAKISLRPGLAAASRPD---PGSSNSPPREPLSYSIKELSQSD 123

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
            +  G F VPR   + V+P +DF   PP Q L+  D    +W+FRH++R +  RH+LTTG
Sbjct: 124 ANGGGSFCVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRHVLTTG 183

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL------ 249
           WS FV+AK LVAGD ++F+      L++G+RR  R    +       D+           
Sbjct: 184 WSKFVNAKLLVAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDPDQPPPPPP 243

Query: 250 -----------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 298
                      +  AA  AA    FTV + PR +  EFV+P  + V+ V  T    G   
Sbjct: 244 RNALARVPPKDVMEAARLAAEGRPFTVTYYPRKAAGEFVVPRNE-VEGVLDTLWEPGSHV 302

Query: 299 RMLFETEESSVRRYMGTITGISDLDPVRWSNSH--------WRSVKVGWD---ESTAGER 347
            M F  E    RR M             W++ H        WR++++ WD    + + + 
Sbjct: 303 LMQF-AEAEDTRRTM-------------WADGHVKAIHQKIWRALEIDWDVASSAISAQL 348

Query: 348 QPRVSLWEIEPLTTFPMYPSL 368
              V+ W+++ +     YPS+
Sbjct: 349 GRFVNAWQVQRIA----YPSI 365


>gi|284811247|gb|ADB96362.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 296

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 180/318 (56%), Gaps = 58/318 (18%)

Query: 414 SLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQS 469
           S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS
Sbjct: 1   SVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQS 60

Query: 470 GSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM----------------- 505
            S N  L L+QQ      +HL+      A+ +   +  PQQ+M                 
Sbjct: 61  ASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQ 115

Query: 506 -----YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEG 559
                Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP          G
Sbjct: 116 PDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--------SG 167

Query: 560 SGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNT 619
            GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A+   N   
Sbjct: 168 DGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALEPGN--- 220

Query: 620 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSS-EL 677
             QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CMQD++ EL
Sbjct: 221 -PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTTHEL 278

Query: 678 LHNVGQIDQLTPTRTFVK 695
           LH  GQI+    T+ FVK
Sbjct: 279 LHGAGQINSSNQTKNFVK 296


>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
 gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
          Length = 216

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 96/223 (43%), Positives = 132/223 (59%), Gaps = 23/223 (10%)

Query: 24  LWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP---PQLICQLH 80
           +W ACAG  V +PT+ +RV YFPQGH EQ +++T      H P   NL    P + CQ+ 
Sbjct: 1   IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAP----HPPFLSNLALSKPLISCQIS 56

Query: 81  NVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-------------YF 127
            V   AD  TDEV+ ++ L PL+        +P+    PS+                  F
Sbjct: 57  AVDFLADPVTDEVFIRLLLLPLN---NHSCNLPLSFLEPSRSEGGGVNDVDDDENKILAF 113

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
            K LT SD +  GGFSVPR  A+ +FP L++  +PP Q L   D+H + W FRHI+RG P
Sbjct: 114 AKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTP 173

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           +RHLLTTGWS FV+ K+L+AGDSV+F+ N K ++ +G+RRA+R
Sbjct: 174 RRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216


>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
          Length = 907

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/197 (50%), Positives = 135/197 (68%), Gaps = 18/197 (9%)

Query: 615 ENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHN--------- 665
           ++ N+D QN ++FGV+IDS  LL+   + S     D   +++P   S F +         
Sbjct: 689 QDGNSDPQNHLLFGVNIDSQSLLMQGGIPSLHDEND--STTIPYSTSNFLSPSQNDFSLD 746

Query: 666 ---SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREE 720
              +  GC+ +S  +   HN  Q +Q  P  TFVKVYKSG+ GRSLDI+RFSSY+ELR E
Sbjct: 747 QTLNSPGCLDESGYVPCSHNPNQGNQ--PPATFVKVYKSGTYGRSLDITRFSSYHELRRE 804

Query: 721 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           LG++FG+EG+ EDPLRSGWQLVFVDRE DVLL+GDDPW+ FV++V+ IKILSP++VQ+MG
Sbjct: 805 LGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFVNSVFCIKILSPQEVQQMG 864

Query: 781 EQGVESFSPSSGQRANS 797
           +QG+E  S +  +R  S
Sbjct: 865 KQGLELLSSAPSKRLGS 881


>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 151

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 100/122 (81%)

Query: 43  VYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPL 102
           ++F +    ++     KEVD+ IPNYPNLPP+LICQLHNV MHAD  TDEVYAQMTLQPL
Sbjct: 30  IFFHRAIVSRLLHQLIKEVDAQIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQPL 89

Query: 103 SPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQP 162
           SPEEQK+ F+PIELG  SKQPTNYF KTLT S+ STHGGFS+PRR+AEKVFP LDFSLQP
Sbjct: 90  SPEEQKEPFLPIELGGASKQPTNYFYKTLTTSERSTHGGFSLPRRSAEKVFPPLDFSLQP 149

Query: 163 PA 164
           P 
Sbjct: 150 PC 151


>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
          Length = 652

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 182/386 (47%), Gaps = 51/386 (13%)

Query: 33  VSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDE 92
           V +P + +RV YFPQGH E      +    S  P        + C + ++ + AD  TDE
Sbjct: 26  VQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--------VPCIITSIQLLADPVTDE 77

Query: 93  VYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRA 148
           V+A + LQP++ ++   T    F   +  +        F K LT SD +  GGFSVPR  
Sbjct: 78  VFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANNGGGFSVPRFC 137

Query: 149 AEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAG 208
           A+ VFP L+F + PP Q+L   D+H   W FRHI+RG P+RHLLTTGWS FV++K+L+AG
Sbjct: 138 ADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAG 197

Query: 209 DSVLFIWNEKNQLLLGIRRAIRPPTVMP---------------SSVLSSDSMHI------ 247
           DSV+F+    +++ +G+RR     +                  SSV   D          
Sbjct: 198 DSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRR 257

Query: 248 ---GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
              G L A A   A N       F V F P A  SEFV+   + V++      + G R +
Sbjct: 258 SGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAEDVESSMSMYWTPGTRVK 316

Query: 300 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKV-------GWDESTAGERQPRVS 352
           M  ETE+SS   +   I   +  +   W  S W+ ++V        WDE    +   RV+
Sbjct: 317 MAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQVYDVFEMITWDEPEILQNVKRVN 376

Query: 353 LWEIEPLTTFPMYPSLFP--LRLKRP 376
            W++E         + FP   RLK P
Sbjct: 377 PWQVEIAAHATQLHTPFPPAKRLKYP 402


>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
 gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
          Length = 215

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 96/222 (43%), Positives = 131/222 (59%), Gaps = 23/222 (10%)

Query: 25  WHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP---PQLICQLHN 81
           W ACAG  V +P V +RV YFPQGH EQ +++T      H P   NL    P + CQ+  
Sbjct: 1   WRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTAP----HPPFLTNLALSKPSIPCQISA 56

Query: 82  VTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK-------------QPTNYFC 128
           V   AD  TDEV+ ++ L PL   +   + +P+    P +             +    F 
Sbjct: 57  VDFLADPVTDEVFTRLLLIPL---DNPFSNLPLSFLEPCRSEGEGANDVDDDERKILAFS 113

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LT SD +  GGFSVPR  A+ +FP L++  +PP Q L   D+H V W FRHI+RG P+
Sbjct: 114 KILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYRGTPR 173

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           RHLLTTGWS FV+ K+L+AGDSV+F+ N K ++ +G+RRA+R
Sbjct: 174 RHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215


>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
          Length = 188

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/169 (54%), Positives = 118/169 (69%), Gaps = 2/169 (1%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           N  L  ELWHACAGPLV++P    RV YFPQGH EQ+ A+ ++ +D  +P++ NLP +++
Sbjct: 16  NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPSKIL 74

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P     + FCKTLTASDT
Sbjct: 75  CKVVNVHLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDT 133

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 185
           STHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW FRHIFRG
Sbjct: 134 STHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRG 182


>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
          Length = 889

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/219 (47%), Positives = 133/219 (60%), Gaps = 28/219 (12%)

Query: 620 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM------------ 667
           DSQN+ ++G + D   +L     +   ++ D G  S+P   S F N++            
Sbjct: 672 DSQNNAMYGFNTDCLNILQNGMSNMKDSTGDNGSLSIPYATSTFTNTVGNEYPINSDMTT 731

Query: 668 YGCMQDSSELLHNVGQIDQLTPT-RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 726
             C+ D S  L +    DQ  PT RTFVKV+KSGS GRSLDIS+FS+Y+ELR EL  MFG
Sbjct: 732 SSCV-DESGFLQSSENGDQRNPTNRTFVKVHKSGSFGRSLDISKFSNYHELRSELAHMFG 790

Query: 727 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 786
           +EG  EDP RSGWQLVFVDRENDVLLLGDDPW+ FV+NVWYIKILSP +VQ+MG+ G++ 
Sbjct: 791 LEGLLEDPERSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKDGLDL 850

Query: 787 FSPSSGQRANSRGNCGRD--------------PVGSLEY 811
            +    QR  S G    D              P+GSL+Y
Sbjct: 851 PNAGLAQRLPSNGVGCDDYMNQKGSRNTMNGIPLGSLDY 889


>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
 gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
          Length = 622

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 171/367 (46%), Gaps = 58/367 (15%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           E   + ++ +LW ACAG + ++P VG    YFPQGH+EQ  A  +  V         +PP
Sbjct: 26  EDKGRDVHPQLWQACAGSMCAVPPVGAADYYFPQGHAEQAGAAVDLRV---------VPP 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 133
            + C++  V + A+ +TD++YA++ L PL P E         LG  S+       +    
Sbjct: 77  FVACRVAAVRLMAEPDTDDIYAKIRLVPLRPWEPVTDVGDALLGEGSRGGDGDGQQRRRR 136

Query: 134 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 193
                                 L F          A+ L   +W FRH++RG P RHL+T
Sbjct: 137 RPRP------------------LSF----------AKTLTQSDWTFRHVYRGNPPRHLIT 168

Query: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----------PPTVMPS--SVL 240
            GWS FV  K+L+ GDSV+F+  E  ++ +G+RRA R                PS   V 
Sbjct: 169 AGWSNFVHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGRSGAAVAGPSDGKVP 228

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 300
           + D +    LAAA         F V   PRAS  EF +     VK    +    G+RF+M
Sbjct: 229 AEDVVEAARLAAAGQP------FEVVHYPRASAPEFCV-RADAVKESMRSPWCPGLRFKM 281

Query: 301 LFETEE-SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
            FETE+ S +  +MGTI G+   DP RW  S WR ++V WDE    +   RV  W +E +
Sbjct: 282 AFETEDLSRISWFMGTIAGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRVELV 341

Query: 360 TTFPMYP 366
           ++ P  P
Sbjct: 342 SSMPNLP 348



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S ++GR+LD+S   S  EL   L  MFGI    E  LRS   +V+     +V  
Sbjct: 534 CKVFVESETLGRNLDLSALGSLEELCARLSSMFGISNNAE--LRS--HMVYRTISGEVKH 589

Query: 753 LGDDPWEAFVSNVWYIKILS 772
           +GD+P+  FV +   I I +
Sbjct: 590 IGDEPFSVFVKSARRITIYT 609


>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
          Length = 915

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 136/210 (64%), Gaps = 25/210 (11%)

Query: 607 GKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF--------TTSVDPGVSSMPL 658
           G+++ V  +  N+D QN ++FGV+IDS  LL+   +           +   D G +++P 
Sbjct: 680 GRESVVDQDE-NSDHQNHLLFGVNIDSQSLLMQDDIPGLQNENDCIASLQDDNGSNTIPY 738

Query: 659 GDSGFHN------------SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGR 704
               F +            +  GC+  S  +    N  Q+++  P  TFVKVYKSG+VGR
Sbjct: 739 STCNFLSPSQNNFPLNEALTSSGCLDGSGYVPFSENPDQVNR--PPATFVKVYKSGAVGR 796

Query: 705 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 764
            LDI+RFSSY+ELR ELG +FG+EG+ EDP+RSGWQLVFVDRENDVLL+GDDPW+ FV++
Sbjct: 797 LLDITRFSSYHELRSELGHLFGLEGQLEDPVRSGWQLVFVDRENDVLLVGDDPWQEFVNS 856

Query: 765 VWYIKILSPEDVQKMGEQGVESFSPSSGQR 794
           V  IKILSP++VQ+MG+QG+E  S +  +R
Sbjct: 857 VSCIKILSPQEVQQMGKQGIELLSSAPARR 886


>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 176

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 100/132 (75%), Gaps = 4/132 (3%)

Query: 57  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL 116
           T K  +S IPNYP+LP QL+CQ+HN+TMHAD +TDEVYAQM LQP++ E   D F    L
Sbjct: 39  TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSET--DVFPIQSL 96

Query: 117 G--IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHD 174
           G    SK P  YFCK LTASD STHGGFS+PRRAA K+FP LD+S+QPP QELI +DLHD
Sbjct: 97  GSYAKSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHD 156

Query: 175 VEWKFRHIFRGQ 186
             W FRHI+RG+
Sbjct: 157 NMWIFRHIYRGR 168


>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
 gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
          Length = 170

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/196 (54%), Positives = 125/196 (63%), Gaps = 42/196 (21%)

Query: 105 EEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPA 164
           +EQK+ ++P ELG PSKQPTNYFCKTLTAS  +                           
Sbjct: 5   QEQKEAYLPAELGTPSKQPTNYFCKTLTASQVT--------------------------- 37

Query: 165 QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW-------NE 217
            + +  D   +  + +  F     RHLLTTGWSVFVSAK LVAGDSV+F W       NE
Sbjct: 38  -QALTGDCLCLVGRLKKCFL---LRHLLTTGWSVFVSAKILVAGDSVMFTWQCIFFNRNE 93

Query: 218 KNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFV 277
           KNQLL GIR AI P TVMPSSVLS+DS+H+GLLAA AHAAATNS FT+F+NPRA PSEFV
Sbjct: 94  KNQLLFGIRHAIWPQTVMPSSVLSTDSLHLGLLAAVAHAAATNSPFTIFYNPRACPSEFV 153

Query: 278 IP----LTKYVKAVFH 289
           IP    + +YVK V+H
Sbjct: 154 IPSLSIMLEYVKVVYH 169


>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 176

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 85/133 (63%), Positives = 101/133 (75%), Gaps = 6/133 (4%)

Query: 57  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE- 115
           T K  +S IPNYP+LP QL+CQ+HN+TMHAD +TDEVYAQM LQP++ E       PI+ 
Sbjct: 39  TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETN---VFPIQS 95

Query: 116 LG--IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLH 173
           LG    SK P  YFCK LTASD STHGGFS+PRRAA K+FP LD+S+QPP QELI +DLH
Sbjct: 96  LGSYAKSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLH 155

Query: 174 DVEWKFRHIFRGQ 186
           D  W FRHI+RG+
Sbjct: 156 DNMWIFRHIYRGR 168


>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
          Length = 881

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/168 (57%), Positives = 114/168 (67%), Gaps = 17/168 (10%)

Query: 266 FFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 325
            +NPR SPSEFV+PL KY KA + T+VS+GMRFRM+FETEESSVRRYMGTITGISDLDPV
Sbjct: 1   VYNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDPV 60

Query: 326 RWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRPWHPSTSSF 384
           RW NS WR+++VGWDES AG++Q RVS+WEIE + T F + P  F  RLKRP  P     
Sbjct: 61  RWPNSQWRNLQVGWDESGAGDKQNRVSIWEIETVATPFFICPPFF--RLKRPLLPGILG- 117

Query: 385 NDNRDETAS--GLNWLRGGTGEQGLTTLNFQS----LGMFPWM--QQR 424
            D+  E AS     WLR          L+FQ+     G+  WM  QQR
Sbjct: 118 EDSEIEAASKRSFPWLREEND-----VLDFQNPLPGAGLDAWMGLQQR 160



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 82/97 (84%)

Query: 689 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           P RT+ KVYK G+VGRS+D++R+ +Y ELR EL +MFG+EG+ EDP ++GWQLVFVD EN
Sbjct: 769 PMRTYTKVYKLGNVGRSIDVTRYKNYGELRHELARMFGLEGQLEDPKKTGWQLVFVDHEN 828

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           D+LL+GDDPWE FVS V YIKILSP++V +M ++G++
Sbjct: 829 DILLVGDDPWEEFVSCVRYIKILSPQEVLQMSQEGMD 865


>gi|224062579|ref|XP_002300855.1| predicted protein [Populus trichocarpa]
 gi|222842581|gb|EEE80128.1| predicted protein [Populus trichocarpa]
          Length = 201

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/150 (59%), Positives = 113/150 (75%), Gaps = 8/150 (5%)

Query: 638 LPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTP-TRTFVKV 696
           +P T S+FT++     S +PL      +S   C+ D S  L +   +DQ+ P TRTFVKV
Sbjct: 1   MPFTASTFTSATG---SDIPLTSDMTASS---CV-DESGFLQSSENVDQVNPSTRTFVKV 53

Query: 697 YKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDD 756
           +KSGS GRSLDIS+FSSY+ELR EL ++F +EG+ ED  RSGWQLVFVDRENDVLLLGDD
Sbjct: 54  HKSGSYGRSLDISKFSSYDELRSELARLFCLEGQLEDRQRSGWQLVFVDRENDVLLLGDD 113

Query: 757 PWEAFVSNVWYIKILSPEDVQKMGEQGVES 786
           PW+ FV+NVWYIKILSP +VQ+MG++G+ S
Sbjct: 114 PWQEFVNNVWYIKILSPLEVQQMGKEGLTS 143


>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 109

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 77/88 (87%), Positives = 82/88 (93%)

Query: 97  MTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL 156
           MTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTL ASDTSTHGGFSVPRRAAEKVFP L
Sbjct: 1   MTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPPL 60

Query: 157 DFSLQPPAQELIARDLHDVEWKFRHIFR 184
           DFS QPPAQELIARDLHD EWKFRHIFR
Sbjct: 61  DFSQQPPAQELIARDLHDNEWKFRHIFR 88


>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
          Length = 207

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 123/202 (60%), Gaps = 10/202 (4%)

Query: 32  LVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETD 91
           +V +P V ++V YFPQGH+E      N    S IP++      + C++ ++   A+ ETD
Sbjct: 1   MVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF------IPCRVEDIRYMANHETD 54

Query: 92  EVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRA 148
           EVYA++ L P++  +     D    I +   +K     F KTLT SD +  GGFS PR  
Sbjct: 55  EVYAKLRLVPMNINQVSFDNDGVAGINVS-ETKDKHQSFAKTLTQSDANNGGGFSCPRYC 113

Query: 149 AEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAG 208
           AE +FP +D+S  PP Q +  +D+H  +W FRH++RG PKRHLLTTGWS FVS K+L +G
Sbjct: 114 AEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASG 173

Query: 209 DSVLFIWNEKNQLLLGIRRAIR 230
           DSV+F+ +E  +L +GI R  R
Sbjct: 174 DSVVFLRSENGELRVGIWREKR 195


>gi|224103213|ref|XP_002334077.1| predicted protein [Populus trichocarpa]
 gi|222869513|gb|EEF06644.1| predicted protein [Populus trichocarpa]
          Length = 163

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/134 (63%), Positives = 106/134 (79%), Gaps = 5/134 (3%)

Query: 670 CMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGI 727
           C+ +S  L  + NVGQ +   P+RTFVKVYKSGS GRSLDI++FS+YNELR EL  MFG+
Sbjct: 6   CIDESGFLQSMENVGQGN--PPSRTFVKVYKSGSFGRSLDITKFSNYNELRSELAFMFGL 63

Query: 728 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 787
           EG+ EDPLRSGWQLVF+DRENDVLLLGD PW  FV++VW IKILSP++VQ+MG++G+E  
Sbjct: 64  EGQLEDPLRSGWQLVFIDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGKRGLELL 123

Query: 788 SPSSGQRANSRGNC 801
           +    QR  S G+C
Sbjct: 124 NSVPIQRL-SNGSC 136


>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
          Length = 546

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/264 (38%), Positives = 142/264 (53%), Gaps = 28/264 (10%)

Query: 142 FSVPRRAAEKVFPSLDFSLQP--PA------------------QELIARDLHDVEWKFRH 181
           F  P+  AE    ++DF+  P  PA                  + +IA+D+H   WKFRH
Sbjct: 31  FYFPQGHAEHAHTNVDFAAAPRIPALVLCRVAAVKFMADPETDETVIAKDVHGEIWKFRH 90

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLS 241
           I+RG P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R        +  
Sbjct: 91  IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGSGGGLRG 150

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
              +    +  AA  AA    F V + PRAS  EF +  +  V++    +   GMRF+M 
Sbjct: 151 GRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASG-VRSAVRIQWCSGMRFKMP 209

Query: 302 FETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
           FETE+SS +  +MGTI+ +   DP+RW NS WR ++V WDE    +   RVS W +E ++
Sbjct: 210 FETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 269

Query: 361 TFPMYPSLFPL-----RLKRPWHP 379
             P+   L P      +L+ P HP
Sbjct: 270 NMPII-HLSPFSPPRKKLRIPQHP 292



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 6/75 (8%)

Query: 18 KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 77
          K L+S+LWHACAG +V +P V ++V YFPQGH+E   A TN +  +     P +P  ++C
Sbjct: 6  KSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAA----APRIPALVLC 59

Query: 78 QLHNVTMHADVETDE 92
          ++  V   AD ETDE
Sbjct: 60 RVAAVKFMADPETDE 74



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 694 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
            KV+ +S  VGRSLD+S   SY EL   L  MFGIE        +   +++ D    V  
Sbjct: 437 CKVFMESEDVGRSLDLSVLGSYEELYTRLANMFGIERS-----ETFSHVLYRDATGAVKH 491

Query: 753 LGDDPWEAFVSNVWYIKILSPEDVQKMG 780
            GD+P+  F      + IL       +G
Sbjct: 492 TGDEPFSDFTKKAKRLTILMDSGSNNIG 519


>gi|297740767|emb|CBI30949.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 111/157 (70%), Gaps = 17/157 (10%)

Query: 670 CMQDSSELL--HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGI 727
           C+ +S  L    NVGQ++   PTRTFVKVYKSGS GRSLDI++FSSY+ELR EL +MFG+
Sbjct: 6   CIDESGFLQSPENVGQVN--PPTRTFVKVYKSGSFGRSLDITKFSSYHELRGELARMFGL 63

Query: 728 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 787
           EG+ EDP RSGWQLVFVDRENDVLLLGDDPW  FV++VW IKILS ++VQ+MG++G+E  
Sbjct: 64  EGQLEDPRRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSLQEVQQMGKRGLELL 123

Query: 788 SPSSGQRANSRG-------------NCGRDPVGSLEY 811
           +    QR  S               + G   VGSL+Y
Sbjct: 124 NSVPIQRLTSSSCDDYASRQDSRNLSTGITSVGSLDY 160


>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
 gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
 gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
          Length = 222

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 128/218 (58%), Gaps = 18/218 (8%)

Query: 14  EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 73
           +G    +  +LW  CAGPL  +P +G +V YFPQGH E V A+T +E++   PN  +LP 
Sbjct: 18  DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPS 76

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFC 128
           +L C++  + +  +  +DE Y ++TL P     + P E ++ F PI          N F 
Sbjct: 77  KLQCRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTENENQFRPI---------VNSFT 127

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           K LTASDTS  G FSVP + A +  P LD S   PAQELIA DLH  +W+F+H +R  P+
Sbjct: 128 KVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPR 186

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 226
               TTGW+ F ++K+LV GD ++F   E  +L +GIR
Sbjct: 187 GD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222


>gi|326512192|dbj|BAJ96077.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 123

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/105 (77%), Positives = 90/105 (85%), Gaps = 6/105 (5%)

Query: 2   KLSTSGLCQ--QGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK 59
           KLS S + Q    ++G+ +CLNSELWHACAGPLVSLP VG+RV+YFPQGHSEQVAA+TNK
Sbjct: 4   KLSMSEMPQPLTENDGEQRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNK 63

Query: 60  EVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSP 104
           EVD+ IPNYPNLPPQLICQLHN    ADVETDEVYAQMTLQ LSP
Sbjct: 64  EVDAQIPNYPNLPPQLICQLHN----ADVETDEVYAQMTLQLLSP 104


>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 545

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 186/369 (50%), Gaps = 50/369 (13%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ ++W ACAG  V +P + +RV YFPQGH E   A+ +  ++  + + P +P    C +
Sbjct: 9   VDPKIWRACAGAAVQIPKLHSRVYYFPQGHLEH--ASPSHYLNPLLRSLPFVP----CHV 62

Query: 80  HNVTMHADVETDEVYAQMTLQPLSP------------EEQKDTFVPIELGIPSKQPTNYF 127
            ++   AD  +DEV+A+  L PLS             EE+KD     E G+ S      F
Sbjct: 63  SSLDFLADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEEKDR----ENGVVS------F 112

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
            K LT SD +  GGFSVPR  A+  FP LDF    P+   +A     V    RHI+RG P
Sbjct: 113 SKILTPSDANNGGGFSVPRYCADSWFPPLDFXXXXPSSP-VATSRRRV--ALRHIYRGTP 169

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGI------RRAIRPPTVMPSSVLS 241
           +RHL TTGWS FV+ K+LVAGD+V+F+ +   ++ +GI        AI  P   P+    
Sbjct: 170 RRHLFTTGWSKFVNHKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREG 229

Query: 242 SDSMHIGLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 296
                 G + A A AAA  S      F V + PR   ++FV+   + V+         GM
Sbjct: 230 FSRSATGRVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVS-AEVVEESMKCAWVGGM 288

Query: 297 RFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWE 355
           R ++  ETE+SS +  + GT++     +     N  WR ++V WDE    +   RVS W+
Sbjct: 289 RVKIAMETEDSSRMTWFQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKRVSPWQ 343

Query: 356 IEPLTTFPM 364
           +E L + P 
Sbjct: 344 VE-LVSLPF 351


>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
 gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
          Length = 456

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 188/374 (50%), Gaps = 16/374 (4%)

Query: 23  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
           E+WH CA   V +P + +RV YFPQGH E  A+ ++  +        +  P  +C +  V
Sbjct: 13  EIWHTCATAAVKIPKLHSRVYYFPQGHLEN-ASPSSSSITHTHSFLQSFRPFTLCIVSAV 71

Query: 83  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGF 142
            + AD  TDEV+ ++ L P++ +   +        +  +     F KTLT SD +    F
Sbjct: 72  DLLADPHTDEVFVKLLLTPITNDVHLENPKEEVANLNDRNEVVSFVKTLTRSDVNNARSF 131

Query: 143 SVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL-TTGWSVFVS 201
            +PR  A+ VFP LD   +  +Q L   D+H    KF H+ RG PKR++L  + W+ FV 
Sbjct: 132 HIPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYISEWNSFVK 191

Query: 202 AKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNS 261
            K+LVAGDSV+F+ +   ++ +GIRR  +   V  ++    D +   ++ A    A  N 
Sbjct: 192 RKKLVAGDSVIFMKDSTGKIFVGIRRNTQ--FVAAAAEQKKDELEKAVMEALK-LAEENK 248

Query: 262 CFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 320
            F + + P+     +FV+      +++   ++    R R+  +T++SS   Y GTI+ +S
Sbjct: 249 AFEIVYYPQGDDWCDFVVDGNVVDESM---KIQWNPRMRVKMKTDKSSRIPYQGTISIVS 305

Query: 321 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPS 380
                R SN  WR ++V WDE    +   RV+ W +E ++  P  P+ FP   K     S
Sbjct: 306 -----RTSNL-WRMLQVNWDEFQVSQIPRRVNPWWVELISHKPA-PTPFPQTKKFRTTQS 358

Query: 381 TSSFNDNRDETASG 394
           ++  +D ++   +G
Sbjct: 359 SAQLSDKKETLLNG 372


>gi|170677526|gb|ACB30835.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677528|gb|ACB30836.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677530|gb|ACB30837.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677532|gb|ACB30838.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677534|gb|ACB30839.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677536|gb|ACB30840.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677538|gb|ACB30841.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677540|gb|ACB30842.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677542|gb|ACB30843.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677544|gb|ACB30844.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677546|gb|ACB30845.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677548|gb|ACB30846.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677550|gb|ACB30847.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677552|gb|ACB30848.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677554|gb|ACB30849.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677556|gb|ACB30850.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677560|gb|ACB30852.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677562|gb|ACB30853.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677564|gb|ACB30854.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677566|gb|ACB30855.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677568|gb|ACB30856.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677570|gb|ACB30857.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677572|gb|ACB30858.1| ARF6, partial [Arabidopsis thaliana]
          Length = 113

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/96 (77%), Positives = 88/96 (91%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           + TFVKVYKSGS GRSLDIS+FSSY+ELR EL +MFG+EG+ EDP+RSGWQLVFVDREND
Sbjct: 3   SNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDREND 62

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           VLLLGDDPW  FVS+VW IKILSP++VQ+MG++G+E
Sbjct: 63  VLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLE 98


>gi|170677558|gb|ACB30851.1| ARF6, partial [Arabidopsis thaliana]
          Length = 113

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 73/96 (76%), Positives = 88/96 (91%)

Query: 690 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           + TFVKVYKSGS GRSLDIS+FSSY+ELR EL +MFG+EG+ E+P+RSGWQLVFVDREND
Sbjct: 3   SNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLENPVRSGWQLVFVDREND 62

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           VLLLGDDPW  FVS+VW IKILSP++VQ+MG++G+E
Sbjct: 63  VLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLE 98


>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
          Length = 630

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 172/380 (45%), Gaps = 79/380 (20%)

Query: 167 LIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 226
           ++A+D+H V WKFRHI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIR
Sbjct: 98  VLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIR 157

Query: 227 RAIRPPTVMP----------------------SSVLSSDSMHIGLLAA------------ 252
           RA +     P                      S  L  D     + AA            
Sbjct: 158 RAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPE 217

Query: 253 ----AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
               AA+ A +   F V + PRAS  EF +     V+A   T+   GMRF+M FETE+SS
Sbjct: 218 EVVEAANLAVSGQPFEVVYYPRASTPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSS 276

Query: 309 -VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 367
            +  +MGT++ +   DP+RW NS WR ++V WDE    +   RVS W +E ++  P    
Sbjct: 277 RISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAI-H 335

Query: 368 LFPL-----RLKRPWHPS--------TSSFNDN------------RDETASGLNWLRGGT 402
           L P      +L  P +P         T  F+ N             D T +G+   R   
Sbjct: 336 LAPFSPPRKKLCVPLYPELPIDGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQ 395

Query: 403 GEQGLTTLNFQSLGMFPWMQQRVEPSFLGN-DHNQQYQAMLAAGMQSGDPVRQQ----FM 457
               L+ L+   L      Q  + P  L   DH  Q +  +AAG+  G P  +      +
Sbjct: 396 FGISLSDLHLNKL------QSSLSPHGLHQLDHGMQPR--IAAGLIIGHPAARDDISCLL 447

Query: 458 QLQQPFQYLQQSGSQNPLQL 477
            +  P    +  G + P QL
Sbjct: 448 TIGSPQNNKKSDGKKAPAQL 467



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 11/88 (12%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPN--LPP 73
           +KCL+ +LWHACAG +V +P V ++V YFPQGH+E            H P  +P   +P 
Sbjct: 17  DKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEH--------AQGHGPVEFPGGRVPA 68

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQP 101
            ++C++  V   AD +TDEV+A++ L P
Sbjct: 69  LVLCRVAGVRFMADPDTDEVFAKIRLVP 96


>gi|224085429|ref|XP_002307573.1| predicted protein [Populus trichocarpa]
 gi|222857022|gb|EEE94569.1| predicted protein [Populus trichocarpa]
          Length = 137

 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 103/142 (72%), Gaps = 8/142 (5%)

Query: 636 LLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTP-TRTFV 694
           L +P   S+FT++     S +PL      +S   C+ D S  L +   +DQ+ P TRTFV
Sbjct: 3   LSMPFAASTFTSATG---SDIPLNSDMTASS---CV-DESGFLQSSENVDQVNPSTRTFV 55

Query: 695 KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 754
           KV+KSGS GRSLDIS+FSSY+ELR EL ++F +EG  EDP RSGWQLVF DRENDVLLLG
Sbjct: 56  KVHKSGSYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRENDVLLLG 115

Query: 755 DDPWEAFVSNVWYIKILSPEDV 776
           DDPW+ FV+NVWYIKILSP +V
Sbjct: 116 DDPWQEFVNNVWYIKILSPLEV 137


>gi|295918075|gb|ADG60256.1| ARF8-like protein [Nicotiana tabacum]
          Length = 119

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/119 (64%), Positives = 92/119 (77%), Gaps = 7/119 (5%)

Query: 700 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 759
           G  GRSLDI++F SY+ELR ELGQMFGIEG  EDP RSGWQLVFVDREND+LLLGDDPWE
Sbjct: 1   GVCGRSLDITQFHSYHELRRELGQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWE 60

Query: 760 AFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC-------GRDPVGSLEY 811
           AFV+NVWYIKILSPEDVQK+G++  +S +  + +R +S  +        G   +GSLEY
Sbjct: 61  AFVNNVWYIKILSPEDVQKLGKEEAKSLNRGAVERMSSSTSADDRDLVSGMPSLGSLEY 119


>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 886

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 16/141 (11%)

Query: 650 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTR--TFVKVYKSGSVGRSLD 707
           +P  +S  LG+SG  NS+                +  + P++  TFVKVYKSGS GRSLD
Sbjct: 724 NPIATSSCLGESGTFNSL--------------DDVCGVNPSQGGTFVKVYKSGSPGRSLD 769

Query: 708 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 767
           I+RFSSY ELR EL ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ FV++VW 
Sbjct: 770 ITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFVNSVWC 829

Query: 768 IKILSPEDVQKMGEQGVESFS 788
           IKILSP+DVQ+M   G +  S
Sbjct: 830 IKILSPQDVQQMVRGGGDLLS 850


>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
 gi|219886495|gb|ACL53622.1| unknown [Zea mays]
 gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 888

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 16/141 (11%)

Query: 650 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTR--TFVKVYKSGSVGRSLD 707
           +P  +S  LG+SG  NS+                +  + P++  TFVKVYKSGS GRSLD
Sbjct: 726 NPIATSSCLGESGTFNSL--------------DDVCGVNPSQGGTFVKVYKSGSPGRSLD 771

Query: 708 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 767
           I+RFSSY ELR EL ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ FV++VW 
Sbjct: 772 ITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFVNSVWC 831

Query: 768 IKILSPEDVQKMGEQGVESFS 788
           IKILSP+DVQ+M   G +  S
Sbjct: 832 IKILSPQDVQQMVRGGGDLLS 852


>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
          Length = 881

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 16/141 (11%)

Query: 650 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTR--TFVKVYKSGSVGRSLD 707
           +P  +S  LG+SG  NS+                +  + P++  TFVKVYKSGS GRSLD
Sbjct: 719 NPIATSSCLGESGTFNSL--------------DDVCGVNPSQGGTFVKVYKSGSPGRSLD 764

Query: 708 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 767
           I+RFSSY ELR EL ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ FV++VW 
Sbjct: 765 ITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFVNSVWC 824

Query: 768 IKILSPEDVQKMGEQGVESFS 788
           IKILSP+DVQ+M   G +  S
Sbjct: 825 IKILSPQDVQQMVRGGGDLLS 845


>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
          Length = 366

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 125/226 (55%), Gaps = 10/226 (4%)

Query: 3   LSTSGLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD 62
           ++T     QGH   +  ++ ++W ACA P   +PTVG  V YFP GH+EQ        + 
Sbjct: 1   MATEPALPQGHGDGDSIVDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQ-------HLL 53

Query: 63  SHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS-K 121
           + +P     P    C + +V++ A+  TDEV+A+++L+P      +    P      S +
Sbjct: 54  APLPASHRFP--CTCTVTDVSLGAEDRTDEVFAKISLRPGPAAASRPEPGPGPGSSNSTR 111

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           Q  +YF   L   DTST G F +PR   E +FP LD +  PP Q+L+ RD     W+F H
Sbjct: 112 QGLSYFVNELLHRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHH 171

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 227
           I+  + ++H LT GWS FV AK LVAGD+++F+ +    L+LG+RR
Sbjct: 172 IYVVKIRQHRLTAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRR 217


>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
 gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
          Length = 410

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 155/332 (46%), Gaps = 40/332 (12%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ ++W  CAG  V +P + + V YFP GH E V+ + N    S +       P   C +
Sbjct: 9   VDPKIWQCCAGAAVKIPKLNSHVYYFPLGHLEHVSPSPNPSTLSLLDRSRQFIP---CTV 65

Query: 80  HNVTMHADVETDEVYAQMTLQPLSP-----------EEQKDTFVPIELGIPSKQPTNYFC 128
             V + AD  TDEV+ ++ L P +            E+Q D    +  G           
Sbjct: 66  STVNLLADPVTDEVFVKLLLTPGTNNCVHEPPPEVREDQHDGVKVVSSG----------- 114

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTLT SD +  G FSVP   A+ +FP LD   + P+Q+L   D+H  EWK RH++RG P 
Sbjct: 115 KTLTPSDANNGGAFSVPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPL 174

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 248
           RHL+TT WS FV  K+L+ GDS++F+          I   I       ++ ++  S    
Sbjct: 175 RHLITTNWSEFVDEKKLIGGDSLVFMKKSTRTGTETISVGIHRQKFGAATKIAEKS---- 230

Query: 249 LLAAAAHAAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES 307
            +  A   A  N  F V + P A    +FV+   K V+     + + G+R +   + + S
Sbjct: 231 -VTEAVELAEKNMAFDVVYYPTAEGWCDFVVN-AKVVEDAMKNKWNSGLRIKHSLKKDNS 288

Query: 308 SVR--RYMGTITGISDLDPVRWSNSHWRSVKV 337
           S R   + GTI+ +S        N  WR ++V
Sbjct: 289 SKRCSNFEGTISALSA------PNRPWRMLEV 314


>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 614

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/153 (51%), Positives = 106/153 (69%), Gaps = 5/153 (3%)

Query: 225 IRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYV 284
            RRA+R  + +PSSV+SS SMH+G+LA A HA  T S FTV++ PR SPSEF+IP  +Y+
Sbjct: 37  FRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYM 96

Query: 285 KAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 344
           ++V     S+GMRFRM FE EE+  +R+ GTI G  +LD + W  S+WRS+KV WDE + 
Sbjct: 97  ESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQL-WPESNWRSLKVRWDEPST 154

Query: 345 GERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRP 376
             R  RVS W+IEP ++ P+ P   PL R+KRP
Sbjct: 155 IPRPDRVSPWKIEPASSPPVNP--LPLSRVKRP 185



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 2/94 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+S+F  Y+EL  EL +MF   G+     R  WQ+V+ D E 
Sbjct: 492 TRSCTKVHKQGVALGRSVDLSKFGDYDELTAELDRMFEFGGELMSSNRD-WQIVYTDPEG 550

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 551 DMMLVGDDPWEEFCSIVRKIFIYTKEEVQKMNSK 584


>gi|49617493|gb|AAT67457.1| auxin response factor, partial [Trifolium repens]
          Length = 116

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/119 (65%), Positives = 87/119 (73%), Gaps = 6/119 (5%)

Query: 330 SHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRD 389
           SHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKRPW P   SFN  +D
Sbjct: 1   SHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFNGMKD 60

Query: 390 E---TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAG 445
           +     S L WLR    ++GL +LNFQ +G+ PWMQ R +PS L N     YQA+ AA 
Sbjct: 61  DDFGMNSPLMWLR--DTDRGLPSLNFQGIGLNPWMQPRFDPSML-NMQTDMYQAVAAAA 116


>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
 gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
          Length = 523

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 176/369 (47%), Gaps = 38/369 (10%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++S++W   AGP V +P +G++V YF +GH E   ++ N E +  +   P   P ++C +
Sbjct: 9   VDSKIWQIRAGPAVKIPKIGSKVYYFSEGHLEHACSSPNIETELLLCLRP---PSVLCII 65

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-------------- 125
            +V + A++ TDEV+A++ L P++ +       P     P K+  +              
Sbjct: 66  SSVDLLANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPAPP 125

Query: 126 --------------YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARD 171
                          + K LT SDT    G  VPR   E +FP+LD      +++L   D
Sbjct: 126 EVPDEEDDDSNNLVSYVKILTQSDT--QSGLFVPRECMELIFPNLDLEDPMQSEKLSVTD 183

Query: 172 LHDVEWKFRHIFRGQP-KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGI-RRAI 229
           + DV W +++ +  +    +  TTGWS FV  K+LVA DSV+FI N   ++ +GI R+A+
Sbjct: 184 IQDVVWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGICRKAM 243

Query: 230 RPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH 289
            P T        S+++    +  A   A  N  F V + P A+  +FV+  +   +A+ +
Sbjct: 244 YPATEEEGG--KSENLTEKAVKDAVELAGKNMAFQVVYYPTANWCDFVVDASVVDEAMKN 301

Query: 290 T-RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 348
                +G++ R+      +S + Y      IS++  V  +   WR ++V WD     +  
Sbjct: 302 GWEFGMGIKLRLNEFASSNSKKTYYQPKGTISNMSNVPSNVPSWRMLQVNWDGPDISQNP 361

Query: 349 PRVSLWEIE 357
            RV+ W+++
Sbjct: 362 NRVNPWQVD 370


>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
          Length = 152

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/118 (55%), Positives = 88/118 (74%), Gaps = 2/118 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 12  FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 71

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R    + S+ L+SD+
Sbjct: 72  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGG--LGSNGLASDN 127


>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
 gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
          Length = 283

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 100/172 (58%), Gaps = 40/172 (23%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           GD K +N  LW  C GPL++LP +G++VVYFPQG++EQV A+T KE D  IP        
Sbjct: 8   GDKKAINQALWLECPGPLITLPAIGSQVVYFPQGYTEQVVASTQKEADFDIP-------- 59

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
            I  L     HAD E DEV+AQMTLQP S  +  D F+  + GI +KQ    F +TLT  
Sbjct: 60  -ISHL-----HADQENDEVFAQMTLQPFS--QTADPFLLPDFGIQTKQTIVSFSRTLT-- 109

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
                                 DF+  PPAQEL+ARDLH++EW+FRHI+RG+
Sbjct: 110 ----------------------DFTQTPPAQELVARDLHNIEWRFRHIYRGR 139


>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
          Length = 627

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 168/365 (46%), Gaps = 52/365 (14%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPN--LPP 73
           +KCL+ +LWHACAG +V +P V ++V YFPQGH+E            H P  +P   +P 
Sbjct: 17  DKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEH--------AQGHGPVEFPGGRVPA 68

Query: 74  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ------KDTFVPIELGIPSKQPTNYF 127
            ++C++  V   AD +TDEV+A++ L P+   EQ       D           ++    F
Sbjct: 69  LVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASF 128

Query: 128 CKTLTASDTSTHGGFSVPRR---AAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
            KTLT SD +  GG  V ++   A + +               +  +  D+    R   +
Sbjct: 129 AKTLTQSDANNGGGTFVNQKKLVAGDSIV-------------FMRTENGDLCVGIRRAKK 175

Query: 185 ---GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW--NEKNQLLLGIRRAIRPPTVMPSSV 239
              G P+             A     G   +F+   ++ N++    R  +R   V P  V
Sbjct: 176 GGVGGPEFLPPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVR-ARVRPEEV 234

Query: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 299
           +            AA+ A +   F V + PRAS  EF +     V+A   T+   GMRF+
Sbjct: 235 VE-----------AANLAVSGQPFEVVYYPRASTPEFCVK-AGAVRAAMRTQWFAGMRFK 282

Query: 300 MLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 358
           M FETE+SS +  +MGT++ +   DP+RW NS WR ++V WDE    +   RVS W +E 
Sbjct: 283 MAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVEL 342

Query: 359 LTTFP 363
           ++  P
Sbjct: 343 VSNMP 347


>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
          Length = 135

 Score =  142 bits (358), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
 gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
 gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  142 bits (358), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  142 bits (358), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  142 bits (358), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 66/118 (55%), Positives = 88/118 (74%), Gaps = 2/118 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R    + S+ L+SD+
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGG--LGSNGLTSDN 118


>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 138

 Score =  142 bits (358), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 66/118 (55%), Positives = 88/118 (74%), Gaps = 2/118 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R    + S+ L+SD+
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGG--LGSNGLTSDN 118


>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
 gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
          Length = 824

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 101/168 (60%), Gaps = 4/168 (2%)

Query: 620 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLH 679
           DS++ ++FGV I+   +   T  S    S D     +    S  H S      +    L 
Sbjct: 639 DSRSHLLFGVSIEPECI---TPSSQGPKSKDGQQRVLGSTSSDLHLSSDNGTLEEPAYLQ 695

Query: 680 NVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 739
                  + P RTF KVYK+GSVGRSLD++R + Y+ LR EL +MFG+EG+ EDP RSGW
Sbjct: 696 RSSSAQPMLP-RTFTKVYKTGSVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGW 754

Query: 740 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 787
           QLVFVD ENDVLL+GDDPWE FVS V  IKI+SP ++  M ++ + + 
Sbjct: 755 QLVFVDNENDVLLVGDDPWEEFVSCVRCIKIMSPSELSHMNQEQLNAI 802


>gi|23343944|gb|AAN16891.1| auxin-responsive factor protein [Mirabilis jalapa]
          Length = 137

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 87/117 (74%), Gaps = 4/117 (3%)

Query: 662 GFHNSMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELRE 719
           G   S   C+ +S  L  + NV Q +Q  PTRTFVKV+K GS GRSLDIS+FSSY ELR 
Sbjct: 23  GSEMSTTSCIDESGYLQSIENVDQTNQ--PTRTFVKVHKMGSFGRSLDISQFSSYQELRS 80

Query: 720 ELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           EL ++FG+E + +D  RSG QLVFVDRENDVLLLGDDPW+ FV  V +I+ILSP++V
Sbjct: 81  ELARLFGLENELKDSPRSGSQLVFVDRENDVLLLGDDPWQEFVKTVGHIRILSPQEV 137


>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
          Length = 273

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 115/222 (51%), Gaps = 23/222 (10%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K LTASD +    FSV    A+ VFP LD+SL  P Q +  RD+H VEW F HI+RG 
Sbjct: 57  FTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGVEWMFCHIWRGS 116

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS-------- 238
           PKRHLLT GW+ FV+ K+L  GDSV+F+  E +++ +G+RR  R    M  +        
Sbjct: 117 PKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFGAMQGNGGGPAGAV 176

Query: 239 -VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
              S   +    + AAA  A     F V + P  + SEF + +            +V   
Sbjct: 177 VGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCVSVA-----------AVKES 225

Query: 298 FRMLFETEESS---VRRYMGTITGISDLDPVRWSNSHWRSVK 336
            +M FETEESS   V  +MGTI  +   DP  W  S WR +K
Sbjct: 226 MQMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267


>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
 gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
          Length = 377

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 163/344 (47%), Gaps = 23/344 (6%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ ++W  C GP V +P + ++V YFP+GH E   ++      + +  Y +  P   C +
Sbjct: 9   VDPKIWQICVGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRSSIP---CIV 65

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            +V +  D  TDEV+A++ L P++ +E     VP +         +Y  KTLT SD +  
Sbjct: 66  SSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYV-KTLTQSDCTR- 123

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
               VP   +  +FP LD      +Q +   DL + EW++ + +    + H   TGW  F
Sbjct: 124 -VLCVPIECSNLIFPKLDLD---KSQSITVTDLKNQEWRYTYTYSNSSRLH---TGWLNF 176

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           V  K+LVA DSV+FI N   ++ +GIRR  +  T   +    + +  I +L  AA  A  
Sbjct: 177 VREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEAAEGSENLTDEIKVL-DAAELAEK 235

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-----VRRYMG 314
           N+ F V + P AS     +   K V          GMR ++  +  ESS     + +  G
Sbjct: 236 NTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKG 295

Query: 315 TITGISDLDPVRWSN-SHWRSVKVGWDESTAGERQPRVSLWEIE 357
           TI+ + +      SN  +WR ++V WD     +    V+ W++E
Sbjct: 296 TISFVFNHS----SNVPNWRILEVNWDGLDIPQIPNLVNPWQVE 335


>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 192

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/140 (48%), Positives = 96/140 (68%), Gaps = 4/140 (2%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  + H+  Y +LP +++C++
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTLTASDT 136
            NV + A+ + DEVYAQ+TL P S  E+  +   +    P   ++   + FCKTLTASDT
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDT 157

Query: 137 STHGGFSVPRRAAEKVFPSL 156
           STHGGFSV RR A++  P L
Sbjct: 158 STHGGFSVLRRHADECLPPL 177


>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 109/367 (29%)

Query: 17  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 76
           +KCL+ +LWHACAG +V +P++ +RVVYFPQGH+E      +          P +PP ++
Sbjct: 12  DKCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-------GNPRIPPLVL 64

Query: 77  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 136
           C++  V   AD E+DE          +PE+                    F KTLT SD 
Sbjct: 65  CRVSAVKYLADPESDE----------APEKPAS-----------------FAKTLTQSDA 97

Query: 137 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
           +  GG+S                                   F +      K++L+    
Sbjct: 98  NNGGGWS----------------------------------NFVN------KKNLVAGDS 117

Query: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-----------------PTVMPSSV 239
            VF+ A              E   L +GIRRA R                  P +  S+ 
Sbjct: 118 IVFLRA--------------ENGDLCVGIRRAKRAGCGPEGYSGFLREDENRPILTHSNA 163

Query: 240 --LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 297
                  +    +A AA  AA    F + + PRAS  EF +  +  V+A    +   GM+
Sbjct: 164 GFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASS-VRAAMQIQWCPGMK 222

Query: 298 FRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 356
           F+M FET++SS +  +MG I+ +   DP+RW NS WR ++V WDE    +   RV+ W +
Sbjct: 223 FKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWLV 282

Query: 357 EPLTTFP 363
           E ++  P
Sbjct: 283 ELVSHVP 289


>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
 gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
 gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
 gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
          Length = 323

 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 152/314 (48%), Gaps = 36/314 (11%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ ++W  C G  V +P + +RV YFPQGH E  A++++     H  +     P  IC +
Sbjct: 17  VHPQIWQTCTGAAVQIPKLHSRVYYFPQGHLEH-ASSSSSNAYIHSLDLQRFRPFTICII 75

Query: 80  HNVTMHADVETDEVYAQMTLQPLS-----------PEEQKDTFVPIELGIPSKQPTNYFC 128
             V + AD  TDEV+A++ L P++           P    D  V  E+        + F 
Sbjct: 76  SAVDLLADPHTDEVFAKLLLTPVTNNSCVQDPHEVPNCSNDDDVCDEV-------IDSFT 128

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           + L  ++ S H  F +PR  AE +FP L   +   +Q L+  D+H   WKF H+  G  K
Sbjct: 129 RILALTNVSKH-AFYIPRFCAENMFPPLGMEV---SQHLLVTDVHGEVWKFHHVCHGFAK 184

Query: 189 RHLL-TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 247
           R++  T+ W+ FV  K+L  GD+V+F+ N   +L +GIRR         ++    D +  
Sbjct: 185 RNVFYTSEWASFVERKKLDVGDAVVFMKNSTGKLFVGIRRK-------DAAEQKKDELEK 237

Query: 248 GLLAAAAHAAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
            ++ A    A  N  F + + PR     +FV+      +++   ++    R R+  +T++
Sbjct: 238 AVMEAVK-LAEENKPFEIVYYPRGDDWCDFVVDGNIVDESM---KIQWNPRMRVKMKTDK 293

Query: 307 SSVRRYMGTITGIS 320
           SS   Y GTIT +S
Sbjct: 294 SSRIPYQGTITTVS 307


>gi|209419738|gb|ACI46673.1| auxin response factor 8 [Solanum lycopersicum]
          Length = 96

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/96 (66%), Positives = 74/96 (77%), Gaps = 6/96 (6%)

Query: 722 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
           GQMFGIEG  EDP RSGWQLVFVDREND+LLLGDDPWEAFV+NVWYIKILSPEDVQK+G+
Sbjct: 1   GQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEAFVNNVWYIKILSPEDVQKLGK 60

Query: 782 QGVESFSPSSGQRANSRGNCGRDPV------GSLEY 811
           +  ES +  + +R +S     RD +      GSLEY
Sbjct: 61  EEAESLNRGAVERMSSTNADDRDLISGMPSLGSLEY 96


>gi|147765452|emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
          Length = 893

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 65/69 (94%)

Query: 88  VETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRR 147
           V+TDEVYAQMTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTL ASDTSTHGGFSVPRR
Sbjct: 374 VKTDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRR 433

Query: 148 AAEKVFPSL 156
           AAEKVFP L
Sbjct: 434 AAEKVFPPL 442


>gi|20146083|emb|CAD29695.1| early auxin-induced protein 22 [Arabidopsis thaliana]
          Length = 278

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 96/144 (66%), Gaps = 6/144 (4%)

Query: 652 GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 709
           G+ S+P    G  N + G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 113 GIPSIPF-KPGCSNEV-GGINDSG--IMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVT 168

Query: 710 RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 769
           R+S Y+ELR +L +MFGIEG+ EDPL S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 169 RYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 228

Query: 770 ILSPEDVQKMGEQGVESFSPSSGQ 793
           ILS  +VQ+M   G  +  P++ Q
Sbjct: 229 ILSSVEVQQMSLDGDLAAIPTTNQ 252


>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
 gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
          Length = 377

 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 23/344 (6%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++ ++W  CAGP V +P + ++V YFP+GH E   ++      + +  Y +  P   C +
Sbjct: 9   VDPKIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRSSIP---CIV 65

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 139
            +V +  D  TDEV+A++ L P++ +E     VP +         +Y  KTLT SD +  
Sbjct: 66  SSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYV-KTLTQSDCTR- 123

Query: 140 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
               VP   +  +FP LD      +Q +   DL + E  + + +    + H   TGW  F
Sbjct: 124 -VLCVPIECSNLIFPKLDLD---KSQSITVTDLKNQERGYTYTYSNSSRLH---TGWLNF 176

Query: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
           V  K+LVA DSV+FI N   ++ +GIRR  +  T        + +  I +L  AA  A  
Sbjct: 177 VREKKLVANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTDEIKVL-DAAELAEK 235

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-----VRRYMG 314
           N+ F V + P AS     +   K V          GMR ++  +  ESS     + +  G
Sbjct: 236 NTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKG 295

Query: 315 TITGISDLDPVRWSN-SHWRSVKVGWDESTAGERQPRVSLWEIE 357
           TI+ + +      SN  +WR ++V WD     +    V+ W++E
Sbjct: 296 TISFVYN----HSSNVPNWRMLEVNWDGLDIPQNPNLVNPWQVE 335


>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
 gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
          Length = 239

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 12/206 (5%)

Query: 22  SELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHN 81
           +++W  C G  V +P + ++V YFPQGH + V+  T   + + +  YP   P + C +  
Sbjct: 37  TKIWQKCVGASVKIPKLHSKVYYFPQGHLKHVSPHT---IITLLHCYP---PSISCIISA 90

Query: 82  VTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY----FCKTLTASDTS 137
           V +  D  TDEV+A++ L P+      +   P E  +P++    Y    F K LT SD +
Sbjct: 91  VDLLVDPHTDEVFAKLLLTPVMDGHGHEQEAPPE--VPAEDDDGYNVVSFVKILTQSDCN 148

Query: 138 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 197
           +  GF VP    + + P L      P+Q+L   D+    W++ HI+RG+ KRHL + GW+
Sbjct: 149 SGCGFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIYRGKSKRHLFSRGWT 208

Query: 198 VFVSAKRLVAGDSVLFIWNEKNQLLL 223
            FV+ K+LVAGDS +FI N    L+L
Sbjct: 209 SFVNNKKLVAGDSFVFIKNSAWWLML 234


>gi|297598571|ref|NP_001045857.2| Os02g0141100 [Oryza sativa Japonica Group]
 gi|255670593|dbj|BAF07771.2| Os02g0141100, partial [Oryza sativa Japonica Group]
          Length = 304

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 687 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           L   RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D 
Sbjct: 167 LQRMRTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDH 226

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           E+D+LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 227 EDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 263


>gi|2618731|gb|AAB84358.1| IAA21 [Arabidopsis thaliana]
          Length = 381

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 691 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
           RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 254 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 313

Query: 751 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 802
           LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 314 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 364


>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
          Length = 155

 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 90/142 (63%), Gaps = 16/142 (11%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           G    L  E W ACAGPLV +  VG RV  FPQGH EQ+ A+TN+E++  IP + NLPP+
Sbjct: 23  GVKDALYEEFWKACAGPLVDVLKVGERVYCFPQGHMEQLEASTNQELNQRIPMF-NLPPK 81

Query: 75  LICQLHNVTMHADVETDEVYAQMTL-------QPLSPEEQKDTFVPIELGIPSKQPTNYF 127
           ++C++ N+ + A+ +TDEVYAQ+TL       +P+SP+       P E   P K   + F
Sbjct: 82  ILCRVFNIQLLAEQDTDEVYAQITLMPEADQTEPISPDS-----CPEE---PPKPDVHSF 133

Query: 128 CKTLTASDTSTHGGFSVPRRAA 149
           CK LTASDTSTHG FSV R+  
Sbjct: 134 CKVLTASDTSTHGEFSVLRKTC 155


>gi|149390661|gb|ABR25348.1| auxin responsive protein [Oryza sativa Indica Group]
          Length = 209

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/99 (56%), Positives = 75/99 (75%)

Query: 687 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           L   RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D 
Sbjct: 71  LKRMRTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDH 130

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           E+D+LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +
Sbjct: 131 EDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCD 169


>gi|1711205|gb|AAB92474.1| IAA23 [Arabidopsis thaliana]
          Length = 591

 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 54/92 (58%), Positives = 69/92 (75%)

Query: 692 TFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
              KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+L
Sbjct: 480 NLYKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDIL 539

Query: 752 LLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           L+GDDPWE FV+ V  IKILS  +VQ+M   G
Sbjct: 540 LVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 571


>gi|302761230|ref|XP_002964037.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
 gi|300167766|gb|EFJ34370.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
          Length = 113

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/88 (60%), Positives = 72/88 (81%), Gaps = 2/88 (2%)

Query: 689 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           PTRT+ KVYK GS+GR++D++RFS+Y ELR EL +MF ++G+ +   +SGWQLVF+D E 
Sbjct: 28  PTRTYTKVYKLGSIGRAVDVTRFSNYTELRWELARMFNLDGQLDQ--KSGWQLVFIDHEG 85

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           D+LL+GDDPWE FVS+V  I+ILSP +V
Sbjct: 86  DILLVGDDPWEEFVSSVRGIRILSPSEV 113


>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
          Length = 497

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/146 (45%), Positives = 91/146 (62%), Gaps = 18/146 (12%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 78
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LPP+++C 
Sbjct: 44  LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLF-VLPPKILCN 102

Query: 79  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 130
           + NV++ A+ +TDEVYAQ+TL        +P+SP+       P EL  P     + F K 
Sbjct: 103 VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPS-----PPELQRPK---VHSFSKV 154

Query: 131 LTASDTSTHGGFSVPRRAAEKVFPSL 156
           LTASDTSTHGGFSV R+ A +  P L
Sbjct: 155 LTASDTSTHGGFSVLRKHATECLPPL 180



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 6/161 (3%)

Query: 623 NSVVFGVHIDSSGLLLPTTVSSFTTSVD---PGVSSMPLGDSGFHNSMYGCMQDSSELLH 679
           N  +FG+ + SS L +P   ++    ++   P + S     S          Q+ +E   
Sbjct: 311 NYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSP 370

Query: 680 NVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 738
              Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+     R+ 
Sbjct: 371 KEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--RNQ 428

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           W++VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 429 WEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 469


>gi|168037231|ref|XP_001771108.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677641|gb|EDQ64109.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 160

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 70/91 (76%)

Query: 691 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 750
           RTF KV+K GSVGRSLD+  F++Y ELR+EL +MF ++   EDP  SGWQ+VFVD END 
Sbjct: 30  RTFTKVHKLGSVGRSLDVRIFNTYAELRKELAKMFHLDCLMEDPPTSGWQIVFVDNENDT 89

Query: 751 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
           LLLGDDPWE F++ V  IKILSP +V ++ +
Sbjct: 90  LLLGDDPWEDFLNCVRSIKILSPSEVTQISQ 120


>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 476

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 84/141 (59%), Gaps = 2/141 (1%)

Query: 217 EKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEF 276
           +  +L LG+RRA++         L S   ++G LA   HA +T S F +F+NPR S SEF
Sbjct: 14  DDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQSEF 73

Query: 277 VIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVK 336
           ++P  K+ K++     SVG RF+M +E+E+++ RRY G ITG  D DP RW  S W+ + 
Sbjct: 74  IVPYWKFTKSISQP-FSVGWRFKMRYESEDAAERRYTGIITGTVDADP-RWRGSKWKCLL 131

Query: 337 VGWDESTAGERQPRVSLWEIE 357
           V WD+     R  R+S WEIE
Sbjct: 132 VRWDDDGEFRRPNRLSPWEIE 152


>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
 gi|194708626|gb|ACF88397.1| unknown [Zea mays]
          Length = 543

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 77/114 (67%), Gaps = 2/114 (1%)

Query: 263 FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDL 322
           FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ GTI G  +L
Sbjct: 2   FTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENL 60

Query: 323 DPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376
           DP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P+ P +   R KRP
Sbjct: 61  DPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKRP 113



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 8/136 (5%)

Query: 653 VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRF 711
           +  +P G      +    +Q + +   ++    Q   TR+  KV+K G ++GRS+D+S+F
Sbjct: 390 IECLPEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKF 449

Query: 712 SSYNELREELGQMFGIEGKFEDPLRSG---WQLVFVDRENDVLLLGDDPWEAFVSNVWYI 768
           + Y EL+ EL +MF  EG+    L SG   WQ+V+ D E D++L+GDDPWE F S V  I
Sbjct: 450 TDYGELQAELDKMFDFEGE----LVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKI 505

Query: 769 KILSPEDVQKMGEQGV 784
            I + E+VQKM  +  
Sbjct: 506 YIYTKEEVQKMNSKSA 521


>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
 gi|223949733|gb|ACN28950.1| unknown [Zea mays]
 gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
          Length = 446

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 166/367 (45%), Gaps = 55/367 (14%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           GDN  ++ ++W ACA P   +PTVG  V YFP GH EQ           H+   P LP Q
Sbjct: 14  GDN-TVDRDVWLACAAPFSRIPTVGDEVYYFPDGHIEQ---------HQHLSAAP-LPAQ 62

Query: 75  --LICQLHNVTMHADVETDEVYAQMTLQPLSPEE---------QKDTFVPIELGIPSKQP 123
               C + +V++  D +TDEV+A+++L+P                ++  P   G P K  
Sbjct: 63  DRFHCTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPAP-GPPQK-- 119

Query: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFP----SLDFSLQPPAQ--ELIARDLHDVEW 177
             YF K L  S T  +  F +P    E V P      D + Q   Q  +++ RD     W
Sbjct: 120 LRYFTKDL--SQTDVYAKFRIPLEN-EHVLPIPKVETDGADQQRVQRQDVVMRDTRGKSW 176

Query: 178 KFRHIFRGQP-KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP 236
           +F   +R  P K H L TGW  F  AKRL AGD ++F+      L++G+RR +  P   P
Sbjct: 177 RFSETYRVNPSKEHSLGTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRR-LHVPRYRP 235

Query: 237 SSVL--SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSV 294
                 + D M    LAAA         FTV + PR +  EF++P ++ V     T    
Sbjct: 236 FDFQGPAQDVMEAVRLAAAGRP------FTVTYFPRQAAVEFIVPRSE-VDDALATSWEP 288

Query: 295 GMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGW--DESTAGERQPRVS 352
           G   RM  E  E   R++   + G   ++ +R   + WR +++ W  D   A  R   V+
Sbjct: 289 GAVVRM--EVMEDENRQHTVWVHG--RVNAIR--QNIWRMLEIIWGVDPPLATTRS--VN 340

Query: 353 LWEIEPL 359
            W++  L
Sbjct: 341 AWQVASL 347


>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
          Length = 418

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 150/335 (44%), Gaps = 33/335 (9%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN-LPP 73
           GDN  ++ ++W ACA P   +PTVG  V YFP GH EQ           H+   P  LP 
Sbjct: 55  GDN-TVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQ-----------HLSAAPQPLPA 102

Query: 74  Q--LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK----QPTNYF 127
           Q    C + +V++  D +TDEV+A+++L+P           P            Q   YF
Sbjct: 103 QHRFHCTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYF 162

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKV-FPSLDFS-LQPPAQELIARDLHDVEWKFRHIFRG 185
            K L  S T  +  F +P      +  P +D   +Q   Q+++ RD     W+F   +  
Sbjct: 163 TKEL--SQTDVYARFRIPLDNEHVLPIPMVDTDGVQ--RQDVVMRDTSGKSWRFSKTYSV 218

Query: 186 QP-KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
            P K+H LTTGW  F  AKRL AGD ++F+      L++G+RR   P   +         
Sbjct: 219 NPSKQHSLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPD 278

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
                +  A   AA    FTV + PR +  EF++P ++ V     T    G   RM  E 
Sbjct: 279 QPAQDVMEAVRLAAAGRPFTVTYFPRQAAVEFIVPRSE-VDDALATSWEPGALVRM--EV 335

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGW 339
            E   R+Y   + G   ++ +R   + WR +++ W
Sbjct: 336 MEDENRQYTMWVVG--RVEAIR--QNIWRMLEIIW 366


>gi|302800377|ref|XP_002981946.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
 gi|302802339|ref|XP_002982925.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
 gi|300149515|gb|EFJ16170.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
 gi|300150388|gb|EFJ17039.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
          Length = 93

 Score =  112 bits (281), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/82 (60%), Positives = 69/82 (84%), Gaps = 2/82 (2%)

Query: 695 KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 754
           +VYK GS+GR++D++RF +Y ELR EL +MFG++G+ +   R+GWQLVFVD+END+LL+G
Sbjct: 1   QVYKLGSIGRAVDVARFKNYVELRAELSRMFGLDGQLDQ--RNGWQLVFVDKENDLLLVG 58

Query: 755 DDPWEAFVSNVWYIKILSPEDV 776
           DDPWE FVS+V  I+ILSP +V
Sbjct: 59  DDPWEEFVSSVRGIRILSPSEV 80


>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
 gi|194689238|gb|ACF78703.1| unknown [Zea mays]
          Length = 430

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 150/335 (44%), Gaps = 33/335 (9%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN-LPP 73
           GDN  ++ ++W ACA P   +PTVG  V YFP GH EQ           H+   P  LP 
Sbjct: 55  GDN-TVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQ-----------HLSAAPQPLPA 102

Query: 74  Q--LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK----QPTNYF 127
           Q    C + +V++  D +TDEV+A+++L+P           P            Q   YF
Sbjct: 103 QHRFHCTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYF 162

Query: 128 CKTLTASDTSTHGGFSVPRRAAEKV-FPSLDFS-LQPPAQELIARDLHDVEWKFRHIFRG 185
            K L  S T  +  F +P      +  P +D   +Q   Q+++ RD     W+F   +  
Sbjct: 163 TKEL--SQTDVYARFRIPLDNEHVLPIPMVDTDGVQ--RQDVVMRDTSGKSWRFSKTYSV 218

Query: 186 QP-KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
            P K+H LTTGW  F  AKRL AGD ++F+      L++G+RR   P   +         
Sbjct: 219 NPSKQHSLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPD 278

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
                +  A   AA    FTV + PR +  EF++P ++ V     T    G   RM  E 
Sbjct: 279 QPAQDVMEAVRLAAAGRPFTVTYFPRQAAVEFIVPRSE-VDDALATSWEPGALVRM--EV 335

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGW 339
            E   R+Y   + G   ++ +R   + WR +++ W
Sbjct: 336 MEDENRQYTMWVVG--RVEAIR--QNIWRMLEIIW 366


>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
 gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
          Length = 412

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 80/122 (65%), Gaps = 4/122 (3%)

Query: 235 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSV 294
           +PSSVLS+++M I  L  AA+     +   V + P A  SEFV+PL+KY  A+F +++S+
Sbjct: 37  LPSSVLSANNMPIDALVVAAN----RTLLPVVYYPGACVSEFVVPLSKYNNALFVSQLSI 92

Query: 295 GMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLW 354
           G+RF M+FET+       MGTI GISDLDP+ W +S W++++V WD+   G +  RV  W
Sbjct: 93  GLRFDMMFETKAFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNRVCSW 152

Query: 355 EI 356
           +I
Sbjct: 153 DI 154


>gi|168053340|ref|XP_001779095.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669547|gb|EDQ56132.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 825

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 76/118 (64%), Gaps = 2/118 (1%)

Query: 659 GDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELR 718
           GD    +++     D   LL       Q   TR+++KVYK GS+ R++D++RF  Y ELR
Sbjct: 685 GDINLSSTVMNGAFDDPRLLQRAFLCPQPKITRSYIKVYKLGSITRAVDVNRFKDYTELR 744

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
            EL +MF ++G+ +  +  GWQLVF D E+D+LL+GDDPW+ FV NV  I+IL+P +V
Sbjct: 745 CELARMFNLDGQLDPTV--GWQLVFTDNEDDLLLVGDDPWDEFVRNVRGIRILTPAEV 800


>gi|302806463|ref|XP_002984981.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
 gi|300147191|gb|EFJ13856.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
          Length = 317

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 76/124 (61%), Gaps = 16/124 (12%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 74
           GD K +N  LW  C GPL++LP +G++VVYFPQGH+EQV A+T KE D  IP        
Sbjct: 8   GDKKAINQALWLECPGPLITLPAIGSQVVYFPQGHTEQVVASTQKEADFDIP-------- 59

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
            I  L     HAD E DEV+AQMTLQP S  +  D F+  + GI +KQ    F +TLT+S
Sbjct: 60  -ISHL-----HADQENDEVFAQMTLQPFS--QTADPFLLPDFGIQTKQTIVSFSRTLTSS 111

Query: 135 DTST 138
             S+
Sbjct: 112 GESS 115


>gi|2708482|gb|AAB92475.1| IAA25 [Arabidopsis thaliana]
          Length = 476

 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 105/192 (54%), Gaps = 13/192 (6%)

Query: 620 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLH 679
           DS+NS++ G ++D+    +P T+ S        + +M     G  N +   M  S+    
Sbjct: 272 DSRNSLLGGANVDNG--FVPDTLLSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVRTQ 329

Query: 680 NVGQIDQLTPTRTFVKVYKSGSVGRSL---------DISRFSSYNELREELGQMFGIEGK 730
           + G +  +      + V  +G +G  L         D++R+  Y+ELR +L +MFGIEG+
Sbjct: 330 SFG-VPNVPAISNDLAVNDAGVLGGGLWPAQTQRMRDVNRYRGYDELRHDLARMFGIEGQ 388

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 790
            EDP  S W+LV+VD END+LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P 
Sbjct: 389 LEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPV 448

Query: 791 SGQRANSRGNCG 802
           + Q A S G+ G
Sbjct: 449 TNQ-ACSGGDSG 459


>gi|414584846|tpg|DAA35417.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 67

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 56/60 (93%)

Query: 724 MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           MFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWYIKILSPEDV KMG+ G
Sbjct: 1   MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPG 60


>gi|168059962|ref|XP_001781968.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666541|gb|EDQ53192.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 139

 Score =  107 bits (268), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/104 (50%), Positives = 72/104 (69%), Gaps = 2/104 (1%)

Query: 673 DSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFE 732
           D   LL       Q   TR+++KVYK GS+ R++D++RF  Y ELR EL +MF ++G+  
Sbjct: 13  DDPTLLQRAFTGPQPKITRSYIKVYKLGSITRAVDVNRFKDYTELRCELARMFNLDGQL- 71

Query: 733 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           DP + GWQLVF D E+D+LL+GDDPWE FV NV  I+IL+P +V
Sbjct: 72  DP-KVGWQLVFTDNEDDLLLVGDDPWEEFVRNVRGIRILTPAEV 114


>gi|302759398|ref|XP_002963122.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
 gi|300169983|gb|EFJ36585.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
          Length = 289

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 81/137 (59%), Gaps = 17/137 (12%)

Query: 654 SSMP-LGDSGFHNSMYGCMQDSSELLHNV-------------GQIDQLTPTRTFVKVYKS 699
           SSMP LGD G  +S            H                   Q+ P R++ KV K 
Sbjct: 132 SSMPALGDGGATSSRQSLYSSQGRAAHGARGDHHDQNAQRVSSSFKQMKP-RSYTKVLKL 190

Query: 700 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 759
           GS+GRSL+I+RF+SY ELR EL +MFG+EG+ +    S WQLV++D + D+LL+GDD WE
Sbjct: 191 GSIGRSLNIARFNSYAELRSELARMFGLEGQLDQS--SHWQLVYMDNDGDILLVGDDRWE 248

Query: 760 AFVSNVWYIKILSPEDV 776
            FVS+V  I+I+SP +V
Sbjct: 249 EFVSSVRGIRIISPSEV 265


>gi|302796880|ref|XP_002980201.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
 gi|300151817|gb|EFJ18461.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
          Length = 289

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 17/137 (12%)

Query: 654 SSMP-LGDSGFHNSMYGCMQDSSELLHNV-------------GQIDQLTPTRTFVKVYKS 699
           SSMP LGD G  +S            H                   Q+ P R++ KV K 
Sbjct: 132 SSMPALGDGGATSSRQSLYSSQGRAAHGARGDHHDQNAQRVSSSFKQMKP-RSYTKVLKL 190

Query: 700 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 759
           GS+GRSL+I+RF+SY ELR EL +MFG+EG+ +    S WQLV++D + D+LL+GDD WE
Sbjct: 191 GSIGRSLNIARFNSYAELRSELARMFGLEGQLDQS--SHWQLVYMDNDGDILLVGDDRWE 248

Query: 760 AFVSNVWYIKILSPEDV 776
            FV++V  I+I+SP +V
Sbjct: 249 EFVTSVRGIRIISPSEV 265


>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 467

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 3/112 (2%)

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
            G+LA+A+HA  TNS F V++ PR S S++++ + KY  A   T  +VGMRFRM FE E+
Sbjct: 1   FGVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLAS-KTGFTVGMRFRMNFEAED 59

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIE 357
             V+++ GTI G  D  P +WS S W+S+KV WD+S A    P RVS WEI+
Sbjct: 60  VPVKKFFGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEID 110



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 683 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 741
           Q  Q +  R  VKV   G +VGR++D++    Y  L  EL QMF I+      ++  +++
Sbjct: 355 QSQQSSIGRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIKD-----IKQNFKV 409

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF--SPSSGQRAN 796
            F D E D + +GDDPW  F   V  I I   ED + M       F  +P    +AN
Sbjct: 410 AFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDPHQTSVFAAAPDEDLKAN 466


>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
          Length = 796

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 150/350 (42%), Gaps = 80/350 (22%)

Query: 20  LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ---- 74
           +  E+W ACA P    LP VG+ V YFP GH++Q                P+ PP+    
Sbjct: 404 ITREMWRACAAPKSGRLPAVGSFVYYFPDGHAQQC---------------PSRPPEPLPG 448

Query: 75  --LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY---FCK 129
              +C++  V +  D   +E++A M+L P++ ++      P + G  S Q       F K
Sbjct: 449 RVFLCKVTAVRL--DATRNELFATMSLIPVARDQAIQPQAPADPGPSSPQVKTTLVSFVK 506

Query: 130 TLTASD-TSTHGGFSVPRR-AAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 187
            LT +D       F VP+R AA  V P L  +   P   L  +D+H  EW   + ++   
Sbjct: 507 PLTCTDAVKNRYRFIVPKREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY- 562

Query: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWN-EKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 246
             H+L++GW  F +A RLV GD+V+F+ + +  +  +G+RR ++P  V    V+      
Sbjct: 563 -THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPEPVSVDEVIE----- 616

Query: 247 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 306
                 A   AA    F V +  R    EFV+PL            +VG +         
Sbjct: 617 ------AVWRAARLEPFEVAYLSRQDGDEFVVPLP-----------NVGPQ--------- 650

Query: 307 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 356
                  G +  I +     ++ S WR ++V W       R   V+ W+I
Sbjct: 651 -------GKVIAIEN-----YATSIWRMIQVEWPSCAGMNRY--VNFWQI 686



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 154/365 (42%), Gaps = 45/365 (12%)

Query: 12  GHEGDNKCLNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDS-HIPNYP 69
             +GD   ++  +W ACA P    LP VG+ V YF  GH+EQ        ++   +P   
Sbjct: 9   ADDGDG-IVDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG-- 65

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNY 126
             P   +C +  V + AD  T+E YA +TL P++  +         P       +Q   Y
Sbjct: 66  --PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRY 123

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KTL +SD      F+VP   A+ VFP L  +     Q LI +DL      F +   G 
Sbjct: 124 FVKTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN 181

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIR-----------RAIRPPTV 234
             R  L   W  F      V GDSV+F+   + ++L +G+R           R  RPPT 
Sbjct: 182 --RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTP 239

Query: 235 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV-FHTRVS 293
           +P +V          + AAA  AA    FT  +  R    EFV+P     + +   +R +
Sbjct: 240 LPVAVQE--------VIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEEGLRLRSRFT 291

Query: 294 VGMRFRMLFETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRV 351
             M    ++  E+ +       G IT I D      +   WRSV++GW  +   E     
Sbjct: 292 PEMEVEFVWALEDGAPPSVGPHGKITAIHD------TTWMWRSVEIGW--TGGSEMNKYA 343

Query: 352 SLWEI 356
           + W++
Sbjct: 344 NFWQV 348


>gi|222629830|gb|EEE61962.1| hypothetical protein OsJ_16730 [Oryza sativa Japonica Group]
          Length = 496

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 145/355 (40%), Gaps = 55/355 (15%)

Query: 20  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
           ++  +W ACA PL  +P VGT+V YFP+GH+EQ  A     +       P+     +C +
Sbjct: 24  IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPL-------PSAHRFFLCTI 76

Query: 80  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS----KQPTNYFCKTLTASD 135
             V + AD  T E YA ++L PL  +       P            Q   Y+ K LT SD
Sbjct: 77  TAVDLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSD 136

Query: 136 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 195
            +  GGFSVPR  A+ +FP+L+    PP  E                  G P   L+   
Sbjct: 137 ANNGGGFSVPRLCADHIFPALNLDDDPPRPE---------------PHHGGPAGRLVGIP 181

Query: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 255
             +   A    A D V  +   +     G      P  VM                 A  
Sbjct: 182 PHLPRHAAPAPADDRVEQVRERQAAGGRGHGGVHVPQEVM----------------EAVR 225

Query: 256 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM-LFETEESSVRRYM- 313
            AA  + F V + PR    EFV+P  +  K +  T    GM+ R  + E E++    ++ 
Sbjct: 226 LAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLT-TPWRCGMQVRAQVMEAEDTRRLAWLN 284

Query: 314 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGE--RQPRVSLWEIEPLTTFPMYP 366
           GT+T +            WR+++V WD S A    +   V+ W+++P+  FP  P
Sbjct: 285 GTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPV-DFPPLP 331


>gi|62865708|gb|AAY17048.1| p-167-1_1 [Pinus resinosa]
          Length = 97

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 56/70 (80%)

Query: 728 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 787
           EG+ EDPLRSGWQLVFVD+E D LLLGDDPWE FV+NVW+IKILSP +VQ+M ++G+E  
Sbjct: 1   EGQLEDPLRSGWQLVFVDKEKDALLLGDDPWEEFVNNVWFIKILSPPEVQQMTQEGLELL 60

Query: 788 SPSSGQRANS 797
           S    QR  S
Sbjct: 61  SSFPTQRQAS 70


>gi|224286963|gb|ACN41183.1| unknown [Picea sitchensis]
          Length = 450

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 75/112 (66%), Gaps = 5/112 (4%)

Query: 672 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 730
           Q SS+  HN  Q +    TR+  KV+K GS +GR++D+++F  Y EL  EL QMF IEG+
Sbjct: 303 QKSSKETHNRPQSNS---TRSCTKVHKQGSALGRAVDLTKFEGYTELIRELEQMFNIEGE 359

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
            EDP + GWQ+V+ D E D++L+GDDPW+ F S V  I I + E+V+KM  Q
Sbjct: 360 LEDPNK-GWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIYIYTREEVEKMTPQ 410


>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
           Os07g0183300/Os07g0183600
 gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
          Length = 762

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 154/363 (42%), Gaps = 45/363 (12%)

Query: 14  EGDNKCLNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDS-HIPNYPNL 71
           +GD   ++  +W ACA P    LP VG+ V YF  GH+EQ        ++   +P     
Sbjct: 11  DGDG-IVDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG---- 65

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFC 128
           P   +C +  V + AD  T+E YA +TL P++  +         P       +Q   YF 
Sbjct: 66  PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 125

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTL +SD      F+VP   A+ VFP L  +     Q LI +DL      F +   G   
Sbjct: 126 KTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN-- 181

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIR-----------RAIRPPTVMP 236
           R  L   W  F      V GDSV+F+   + ++L +G+R           R  RPPT +P
Sbjct: 182 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTPLP 241

Query: 237 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV-FHTRVSVG 295
            +V          + AAA  AA    FT  +  R    EFV+P     + +   +R +  
Sbjct: 242 VAVQE--------VIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEEGLRLRSRFTPE 293

Query: 296 MRFRMLFETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSL 353
           M    ++  E+ +       G IT I D      +   WRSV++GW  +   E     + 
Sbjct: 294 MEVEFVWALEDGAPPSVGPHGKITAIHD------TTWMWRSVEIGW--TGGSEMNKYANF 345

Query: 354 WEI 356
           W++
Sbjct: 346 WQV 348



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 132/302 (43%), Gaps = 40/302 (13%)

Query: 69  PNLPPQ------LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQ 122
           P+ PP+       +C++  V +  D   +E++A M+L P++ ++      P + G  S Q
Sbjct: 377 PSRPPEPLPGRVFLCKVTAVRL--DATRNELFATMSLIPVARDQAIQPQAPADPGPSSPQ 434

Query: 123 PTNY---FCKTLTASD-TSTHGGFSVPRR-AAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
                  F K LT +D       F VP+R  A  V P L  +   P   L  +D+H  EW
Sbjct: 435 VQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEW 491

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN-EKNQLLLGIRRAIRPPTVMP 236
              + ++     H+L++GW  F +A RLV GD+V+F+ + +  +  +G+RR ++P  V  
Sbjct: 492 VINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPEPVSV 549

Query: 237 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 296
             V+            A   AA    F V +  R    EFV+P    V      + + GM
Sbjct: 550 DEVIE-----------AVWRAARLEPFEVTYLSRQDGDEFVVP-CGIVHNALRAKFTPGM 597

Query: 297 RFRMLFETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLW 354
               ++  EE  +      G +  I +     ++ S WR ++V W       R   V+ W
Sbjct: 598 VVNFVWAVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNRY--VNFW 650

Query: 355 EI 356
           +I
Sbjct: 651 QI 652


>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
          Length = 728

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 155/352 (44%), Gaps = 58/352 (16%)

Query: 20  LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           ++ ++WHACA P    LP VGT V Y P GH EQ A      + S +P+ P  P  + C 
Sbjct: 19  IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLL-SRLPD-PIHP--VPCT 74

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + ++ +  D E+ E YA ++L P S     DT    ++    +    +F K L+ +D ++
Sbjct: 75  VADLVLDVDAESGEAYATISLLPGS---HDDTTARRQVPAHGEPGFRFFEKQLSPADVTS 131

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL------ 192
           +    +P   AE V P LD +    A+    RDL    ++F HI+  +  R++L      
Sbjct: 132 N-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVN 189

Query: 193 -TTGWSVFVSAKRLVAGDSVLFIWN------EKNQLLLGIRRAIRP-------PTVMPSS 238
              GW  FV AKRL   D+V+F+           +LL+G+RRA R        P V  + 
Sbjct: 190 DNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK 249

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH------TRV 292
           V+S   +          A    + F V + PR    EFV+   +Y+   F          
Sbjct: 250 VVSEVWL----------AMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGT 299

Query: 293 SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 344
           +V +R   L   +  S     GT+     L P       WR ++V WD++ +
Sbjct: 300 TVHLRMNPLQIAQSIS-----GTVRTFDHLRP-------WRMLEVDWDQAAS 339



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 49/292 (16%)

Query: 88  VETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTLTASDTSTHGG 141
           V +D+ YA ++L P       D +V       ++ P        +F K L+ SD + +GG
Sbjct: 397 VPSDDSYAMISLFP------GDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGG 450

Query: 142 -----FSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG-----QPKRH 190
                F +P+  AAE V P +         +L   +L    W+F H +       +   H
Sbjct: 451 GSGALFVIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEFGHTWSDADTDRRSSSH 502

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEK-NQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
            L  GWS FV AKRL  GD+V+F+      + L+G+RR  +P   MP  +         L
Sbjct: 503 TLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRR--KPHGGMPVGIPDKHVADAWL 560

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
            A++A        F V + P    +EFV+   +  +      ++ G R R+L   +++  
Sbjct: 561 DASSAQP------FRVTYCPWQGTAEFVV---RREEVEGSPPLAPGTRVRLLMNPDDARR 611

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST--AGERQPRVSLWEIEPL 359
           R        + D+       S WR ++V WD  +  A     RV+ W+++P+
Sbjct: 612 RSQPPVYGTVRDVH----CRSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 659


>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
 gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
 gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
          Length = 752

 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 155/352 (44%), Gaps = 58/352 (16%)

Query: 20  LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           ++ ++WHACA P    LP VGT V Y P GH EQ A      + S +P+ P  P  + C 
Sbjct: 19  IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLL-SRLPD-PIHP--VPCT 74

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + ++ +  D E+ E YA ++L P S     DT    ++    +    +F K L+ +D ++
Sbjct: 75  VADLVLDVDAESGEAYATISLLPGS---HDDTTARRQVPAHGEPGFRFFEKQLSPADVTS 131

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL------ 192
           +    +P   AE V P LD +    A+    RDL    ++F HI+  +  R++L      
Sbjct: 132 N-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVN 189

Query: 193 -TTGWSVFVSAKRLVAGDSVLFIWN------EKNQLLLGIRRAIRP-------PTVMPSS 238
              GW  FV AKRL   D+V+F+           +LL+G+RRA R        P V  + 
Sbjct: 190 DNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK 249

Query: 239 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH------TRV 292
           V+S   +          A    + F V + PR    EFV+   +Y+   F          
Sbjct: 250 VVSEVWL----------AMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGT 299

Query: 293 SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 344
           +V +R   L   +  S     GT+     L P       WR ++V WD++ +
Sbjct: 300 TVHLRMNPLQIAQSIS-----GTVRTFDHLRP-------WRMLEVDWDQAAS 339



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 49/290 (16%)

Query: 90  TDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTLTASDTSTHGG-- 141
           +D+ YA ++L P       D +V       ++ P        +F K L+ SD + +GG  
Sbjct: 423 SDDSYAMISLFP------GDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGGGS 476

Query: 142 ---FSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG-----QPKRHLL 192
              F +P+  AAE V P +         +L   +L    W+F H +       +   H L
Sbjct: 477 GALFVIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTL 528

Query: 193 TTGWSVFVSAKRLVAGDSVLFIWNEK-NQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 251
             GWS FV AKRL  GD+V+F+      + L+G+RR  +P   MP  +         L A
Sbjct: 529 AAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRR--KPHGGMPVGIPDKHVADAWLDA 586

Query: 252 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 311
           ++A        F V + P    +EFV+   +  +      ++ G R R+L   +++  R 
Sbjct: 587 SSAQP------FRVTYCPWQGTAEFVV---RREEVEGSPPLAPGTRVRLLMNPDDARRRS 637

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDEST--AGERQPRVSLWEIEPL 359
                  + D+       S WR ++V WD  +  A     RV+ W+++P+
Sbjct: 638 QPPVYGTVRDVH----CRSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 683


>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
 gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
 gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
          Length = 407

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 176/413 (42%), Gaps = 65/413 (15%)

Query: 12  GHEGDNKCLNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDS-HIPNYP 69
             +GD   ++ ++W ACA P    LP VG+ V YF  GH+ Q        ++   +P   
Sbjct: 9   ADDGDG-IVDRDMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG-- 65

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP--------IELGIPSK 121
             P   +C +  V + AD  T+E YA++TL P++     D  VP                
Sbjct: 66  --PRVFLCTVAAVRLRADALTNEAYAEITLDPVA-----DHDVPRLAPAPAPAPAAAAGG 118

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           Q   YF KTL  SD      FS P   A+ VFP L  +     Q L+ +DLH     F +
Sbjct: 119 QQLRYFVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKA--VQPLLVKDLHGSPMTFDY 176

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-----WNEKNQLLLGIR---------- 226
             +G  KR  L   W  F      V GDSV+F+      ++  +L +G+R          
Sbjct: 177 GRKG--KRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLR 234

Query: 227 ---RAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKY 283
              R  RPPT   ++V  +       + AAA  AA    FTV +  R    EFV+P  + 
Sbjct: 235 NTMRRYRPPTPPQAAVQEA-------VLAAAGHAAAGERFTVAYRSRKDGDEFVVP-REA 286

Query: 284 VKAVFHTRVSVGMRFRMLFETEESS--VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDE 341
           V+     R++       ++  E+ +  +    G +T I+       +   WR++++ WD 
Sbjct: 287 VEEGLRARLTSLAEVEFVWAVEDGAPPIVGPRGKVTAIA-------TGQLWRNLEIVWDG 339

Query: 342 STAGERQPRVSLWEIEPLTTFPMYPSL-FPLRLKRPWHPSTSSFN---DNRDE 390
           ++  E     + W++ P+    + PS   P RLK      T+S +   DN DE
Sbjct: 340 NS--EMDMSANFWQVRPVEEVDISPSTPPPKRLKNCEIDDTASTSVSVDNGDE 390


>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
          Length = 407

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 175/413 (42%), Gaps = 65/413 (15%)

Query: 12  GHEGDNKCLNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDS-HIPNYP 69
             +GD   ++  +W ACA P    LP VG+ V YF  GH+ Q        ++   +P   
Sbjct: 9   ADDGDG-IVDRAMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG-- 65

Query: 70  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP--------IELGIPSK 121
             P   +C +  V + AD  T+E YA++TL P++     D  VP                
Sbjct: 66  --PRVFLCTVAAVRLRADALTNEAYAEITLDPVA-----DHDVPRLAPAPAPAPAAAAGG 118

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           Q   YF KTL  SD      FS P   A+ VFP L  +     Q L+ +DLH     F +
Sbjct: 119 QQLRYFVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKA--VQPLLVKDLHGSPMTFDY 176

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-----WNEKNQLLLGIR---------- 226
             +G  KR  L   W  F      V GDSV+F+      ++  +L +G+R          
Sbjct: 177 GRKG--KRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLR 234

Query: 227 ---RAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKY 283
              R  RPPT   ++V  +       + AAA  AA    FTV +  R    EFV+P  + 
Sbjct: 235 NTMRRYRPPTPPQAAVQEA-------VLAAAGHAAAGERFTVAYRSRQDGDEFVVP-REA 286

Query: 284 VKAVFHTRVSVGMRFRMLFETEESS--VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDE 341
           V+     R++       ++  E+ +  +    G +T I+       +   WR++++ WD 
Sbjct: 287 VEEGLRARLTSLAEVEFVWAVEDGAPPIVGPRGKVTAIA-------TGQLWRNLEIVWDG 339

Query: 342 STAGERQPRVSLWEIEPLTTFPMYPSL-FPLRLKRPWHPSTSSFN---DNRDE 390
           ++  E     + W++ P+    + PS   P RLK      T+S +   DN DE
Sbjct: 340 NS--EMDMSANFWQVRPVEEVDISPSTPPPKRLKNCEIDDTASTSVSVDNGDE 390


>gi|357472329|ref|XP_003606449.1| Auxin response factor [Medicago truncatula]
 gi|355507504|gb|AES88646.1| Auxin response factor [Medicago truncatula]
          Length = 361

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 65/95 (68%), Gaps = 2/95 (2%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           Q T  R+  KV+K GS VGR++D+SR S YN+L  EL ++FG+EG   D  + GW++++ 
Sbjct: 227 QNTAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDK-GWRILYT 285

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 286 DSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKM 320


>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
          Length = 429

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 70/109 (64%), Gaps = 2/109 (1%)

Query: 249 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 308
           +L+A A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++
Sbjct: 1   MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSL-NYHFSVGTRFKVGCENEDAN 59

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 357
            R + G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 60  ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 107


>gi|168061668|ref|XP_001782809.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665711|gb|EDQ52386.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 100

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 1/80 (1%)

Query: 696 VYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGD 755
           VY+ G VGR++D+ +  SY+ LR  L  +F ++G+ +D +  GWQLV+ D ENDVLL+GD
Sbjct: 1   VYQQGKVGRTIDLRKCESYDGLRRVLANLFNLQGQLDD-VTKGWQLVYTDHENDVLLVGD 59

Query: 756 DPWEAFVSNVWYIKILSPED 775
           DPWE F   V  +KILSP+D
Sbjct: 60  DPWEEFCGCVRSLKILSPQD 79


>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
          Length = 722

 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 65/359 (18%)

Query: 20  LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           ++ ++WHACA P    LP VGT V Y P GH EQ A      + S +P+ P  P  + C 
Sbjct: 19  IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLL-SRLPD-PIHP--VPCT 74

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 138
           + ++ +  D E+ E YA ++L P S     DT    ++    +    +F K L+ +D ++
Sbjct: 75  VADLVLDVDAESGEAYATISLLPGS---HDDTTARRQVPAHGEPGFRFFEKQLSPADVTS 131

Query: 139 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH-----IFRGQPKRHLL- 192
           +    +P   AE V P LD +    A+    RDL    ++F H     I+  +  R++L 
Sbjct: 132 N-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRCRYMLG 189

Query: 193 ------TTGWSVFVSAKRLVAGDSVLFIWN--------EKNQLLLGIRRAIRP------- 231
                   GW  FV AKRL   D+V+F+             +LL+G+RRA R        
Sbjct: 190 DLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARGGHHPR 249

Query: 232 PTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH-- 289
           P V  + V+S   + +  +          + F V + PR    EFV+   +Y+   F   
Sbjct: 250 PGVEDNKVVSEVWLEMQGV----------TPFEVTYYPREGTFEFVVSRDEYIGFSFSPF 299

Query: 290 ----TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 344
                  +V +R   L   +  S     GT+     L P       WR ++V WD++ +
Sbjct: 300 YPFVPGTTVHLRMNPLQIAQSIS-----GTVRTFDHLRP-------WRMLEVDWDQAAS 346



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 116/292 (39%), Gaps = 62/292 (21%)

Query: 88  VETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTLTASDTSTHGG 141
           V +D+ YA ++L P       D +V       ++ P        +F K L+ SD + +GG
Sbjct: 404 VPSDDSYAMISLFP------GDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGG 457

Query: 142 -----FSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG-----QPKRH 190
                F +P+  AAE V P +         +L   +L    W+F H +       +   H
Sbjct: 458 GSGALFVIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEFGHTWSDADTDRRSSSH 509

Query: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNEKN-QLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 249
            L  GWS FV AKRL  GD+V+F+      + ++G+RR                 M +G+
Sbjct: 510 TLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPIVGVRRK------------PHGGMLVGI 557

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
                  A  ++  T  F  R    E   PL              G R R+L   ++   
Sbjct: 558 PDKHVADAWLDAVGTAEFVVRREEVEGSPPLAP------------GTRVRLLMNPDDVRR 605

Query: 310 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST--AGERQPRVSLWEIEPL 359
           R        + D+     S S WR ++V WD  +  A     RV+ W+++P+
Sbjct: 606 RSQPPVYGTVRDVH----SRSKWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 653


>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
 gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
          Length = 585

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 32/295 (10%)

Query: 20  LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           +  ++W ACA P    LPTVG+ V YFP GH+EQ  +   + +   I          +C+
Sbjct: 276 VTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---------FLCK 326

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           + +V + A   T+E  A ++L P++ ++   Q       +      Q    F K LT +D
Sbjct: 327 VTDVRLGA-AATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTD 385

Query: 136 TSTHGGFSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
             T   F VP+  AA  V P +  +   P   L  +DL   EW F + ++   +  +   
Sbjct: 386 V-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRN 439

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GW  F +A  LV GD+ +F+     ++ + +RR    P   P SV          +  A 
Sbjct: 440 GWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPA--PFSVEE--------VIEAV 489

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
             AA    F V +  R    EFV+P    V      R + GM    ++  E+  +
Sbjct: 490 WRAARREPFEVSYCLRQDGDEFVVP-RDIVDDGLRARFAPGMAVNFVWAVEDGKL 543


>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
          Length = 377

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 23/113 (20%)

Query: 121 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW-KF 179
           K+ ++ FCKTLTASDTSTHGGFSVPRRAAE  FP L+F                  W +F
Sbjct: 117 KRMSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRF 158

Query: 180 RHIFRGQPKRHLL----TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA 228
           +   R   + +++    TTG S FV+ K+LV+ D+VLF+  +  +L LG+RRA
Sbjct: 159 KECKRTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVRRA 211


>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
          Length = 541

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 32/295 (10%)

Query: 20  LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           +  ++W ACA P    LPTVG+ V YFP GH+EQ  +   + +   I          +C+
Sbjct: 253 VTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---------FLCK 303

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           + +V + A   T+E  A ++L P++ ++   Q       +      Q    F K LT +D
Sbjct: 304 VTDVRLGA-AATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTD 362

Query: 136 TSTHGGFSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
             T   F VP+  AA  V P +  +   P   L  +DL   EW F + ++   +  +   
Sbjct: 363 V-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRN 416

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GW  F +A  LV GD+ +F+     ++ + +RR    P   P SV          +  A 
Sbjct: 417 GWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPA--PFSVEE--------VIEAV 466

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
             AA    F V +  R    EFV+P    V      R + GM    ++  E+  +
Sbjct: 467 WRAARREPFEVSYCSRQDGDEFVVP-RDIVDDGLRARFAPGMAVNFVWAVEDGKL 520


>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
          Length = 431

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+K GS VGRS+D+S+ + Y++L  EL Q+F +EG   DP + GW++V+ D END
Sbjct: 314 RSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEK-GWRVVYTDNEND 372

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW+ F   V  I I + +DV+ M
Sbjct: 373 MVLVGDDPWQEFCDVVCKILICTQDDVENM 402



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 370
           R  G ITGI D+DP+RW +S WR + V WDE    E + RVS WEIEP +  P  P+L  
Sbjct: 1   RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEP-SVLP--PALNV 57

Query: 371 LRLK--RPWHPSTSS 383
            RLK  RP  PS ++
Sbjct: 58  PRLKKLRPSLPSGAA 72


>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
 gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
          Length = 524

 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 32/295 (10%)

Query: 20  LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 78
           +  ++W ACA P    LPTVG+ V YFP GH+EQ  +   + +   I          +C+
Sbjct: 236 VTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---------FLCK 286

Query: 79  LHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASD 135
           + +V + A   T+E  A ++L P++ ++   Q       +      Q    F K LT +D
Sbjct: 287 VTDVRLGA-AATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTD 345

Query: 136 TSTHGGFSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
             T   F VP+  AA  V P +  +   P   L  +DL   EW F + ++   +  +   
Sbjct: 346 V-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRN 399

Query: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 254
           GW  F +A  LV GD+ +F+     ++ + +RR    P   P SV          +  A 
Sbjct: 400 GWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPA--PFSVEE--------VIEAV 449

Query: 255 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 309
             AA    F V +  R    EFV+P    V      R + GM    ++  E+  +
Sbjct: 450 WRAARREPFEVSYCLRQDGDEFVVP-RDIVDDGLRARFAPGMAVNFVWAVEDGKL 503


>gi|291196877|emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
          Length = 478

 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 66/93 (70%), Gaps = 2/93 (2%)

Query: 688 TPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 746
           T  R+  KV+K GS VGR++++S+F  Y++L  EL ++F +EG   DP + GWQ+V+ D 
Sbjct: 337 TANRSCTKVHKQGSMVGRAINLSKFEGYDDLISELERLFNMEGLLNDP-KKGWQVVYTDS 395

Query: 747 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++D++L+GDDPW+ F + V  I I + ++V+KM
Sbjct: 396 DDDMMLVGDDPWQEFCNIVSKILIYTHDEVEKM 428


>gi|224062031|ref|XP_002300720.1| predicted protein [Populus trichocarpa]
 gi|222842446|gb|EEE79993.1| predicted protein [Populus trichocarpa]
          Length = 75

 Score = 89.0 bits (219), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/66 (57%), Positives = 51/66 (77%)

Query: 694 VKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 753
           ++V K+GSVGRS+D+S F +Y EL   +  MFG++G   +P  SGW+LV+VD ENDVLL+
Sbjct: 10  LQVQKTGSVGRSIDVSSFKNYEELCSAIECMFGLDGLLNNPKGSGWKLVYVDYENDVLLI 69

Query: 754 GDDPWE 759
           GDDPWE
Sbjct: 70  GDDPWE 75


>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
          Length = 528

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 22/202 (10%)

Query: 250 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS- 308
           +  +A  AA    F V + PRAS  EF +   + V A    + S GMRF+M FETE+SS 
Sbjct: 54  VVESATLAAAGQPFEVVYYPRASTPEFCVK-AQAVDAALRVQWSAGMRFKMAFETEDSSR 112

Query: 309 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP---MY 365
           +  +MGTI+ +   DPV W NS WR ++V WDE    +   RVS W +E +++ P   + 
Sbjct: 113 ISWFMGTISSVQLADPVCWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVEVVSSMPPIQLT 172

Query: 366 PSLFP-LRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMF-PW--M 421
           P   P  +L+   HP                   +G  G   + TL    LG F PW  +
Sbjct: 173 PFTLPKKKLRVTQHPELQIEG-------------QGIMGGLQMATLTNNVLGQFNPWHSL 219

Query: 422 QQRVEPSFLGNDHNQQYQAMLA 443
            + +     G  H   Y   L+
Sbjct: 220 SENIPAGMQGARHGHIYGIALS 241



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 6/87 (6%)

Query: 695 KVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 753
           KV+ +S  VGR+LD+S FSSY +L   L +MFGIE      L    ++++ D +  V   
Sbjct: 446 KVFMESEDVGRTLDLSLFSSYEQLYHRLAKMFGIE-----ELELSNRVLYKDTDGTVRHT 500

Query: 754 GDDPWEAFVSNVWYIKILSPEDVQKMG 780
           GD+P+  F+  V  + ILS      MG
Sbjct: 501 GDEPYRDFMKTVRRLTILSDSSSDNMG 527


>gi|326497483|dbj|BAK05831.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 186

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 56/80 (70%), Gaps = 1/80 (1%)

Query: 20 LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 79
          L  ELWHACA PLV+ P VG  V YFPQGH EQV A+ N+   + +  Y +LPP+L+C++
Sbjct: 18 LYDELWHACAVPLVTAPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRV 76

Query: 80 HNVTMHADVETDEVYAQMTL 99
           N+ + A+ + D+VYAQ+ L
Sbjct: 77 INIELKAEADIDKVYAQVIL 96


>gi|242050918|ref|XP_002463203.1| hypothetical protein SORBIDRAFT_02g039703 [Sorghum bicolor]
 gi|241926580|gb|EER99724.1| hypothetical protein SORBIDRAFT_02g039703 [Sorghum bicolor]
          Length = 74

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/71 (67%), Positives = 58/71 (81%), Gaps = 3/71 (4%)

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           SDSMHI L+AAAAH A+ NS FT+F+N RA+PSEFVI L KYV+A++HTR+ VGM FRML
Sbjct: 1   SDSMHISLIAAAAHVASANSWFTIFYNTRANPSEFVISLAKYVEALYHTRIYVGMHFRML 60

Query: 302 F---ETEESSV 309
           F   +TEES V
Sbjct: 61  FLRQQTEESMV 71


>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
          Length = 721

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 132/302 (43%), Gaps = 40/302 (13%)

Query: 69  PNLPPQ------LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQ 122
           P+ PP+       +C++  V +  D   +E++A M+L P++ ++      P + G  S Q
Sbjct: 336 PSRPPEPLPGRVFLCKVTAVRL--DATRNELFATMSLIPVARDQAIQPQAPADPGPSSPQ 393

Query: 123 PTNY---FCKTLTASD-TSTHGGFSVPRR-AAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
                  F K LT +D       F VP+R  A  V P L  +   P   L  +D+H  EW
Sbjct: 394 VQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEW 450

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN-EKNQLLLGIRRAIRPPTVMP 236
              + ++     H+L++GW  F +A RLV GD+V+F+ + +  +  +G+RR ++P  V  
Sbjct: 451 VINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPEPVSV 508

Query: 237 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 296
             V+            A   AA    F V +  R    EFV+P    V      + + GM
Sbjct: 509 DEVIE-----------AVWRAARLEPFEVTYLSRQDGDEFVVP-CGIVHNALRAKFTPGM 556

Query: 297 RFRMLFETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLW 354
               ++  EE  +      G +  I +     ++ S WR ++V W       R   V+ W
Sbjct: 557 VVNFVWAVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNRY--VNFW 609

Query: 355 EI 356
           +I
Sbjct: 610 QI 611



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 126/303 (41%), Gaps = 38/303 (12%)

Query: 72  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFC 128
           P   +C +  V + AD  T+E YA +TL P++  +         P       +Q   YF 
Sbjct: 26  PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 85

Query: 129 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 188
           KTL +SD      F+VP   A+ VFP L  +     Q LI +DL      F +   G   
Sbjct: 86  KTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN-- 141

Query: 189 RHLLTTGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIR-----------RAIRPPTVMP 236
           R  L   W  F      V GDSV+F+   + ++L +G+R           R  RPPT +P
Sbjct: 142 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTPLP 201

Query: 237 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV-FHTRVSVG 295
            +V          + AAA  AA    FT  +  R    EFV+P     + +   +R +  
Sbjct: 202 VAVQE--------VIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEEGLRLRSRFTPE 253

Query: 296 MRFRMLFETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSL 353
           M    ++  E+ +       G IT I D      +   WRSV++GW  +   E     + 
Sbjct: 254 MEVEFVWALEDGAPPSVGPHGKITAIHD------TTWMWRSVEIGW--TGGSEMNKYANF 305

Query: 354 WEI 356
           W++
Sbjct: 306 WQV 308


>gi|222066052|emb|CAX21481.1| ARF8 protein [Olea europaea]
          Length = 56

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/56 (85%), Positives = 52/56 (92%)

Query: 235 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 290
           MPSSVLSSDSMHIGLLAAAAHAAATNS F +F+NPRASPSEFVIPL KY KA++HT
Sbjct: 1   MPSSVLSSDSMHIGLLAAAAHAAATNSRFCIFYNPRASPSEFVIPLAKYAKALYHT 56


>gi|2245394|gb|AAC49752.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|20146085|emb|CAD29696.1| putative auxin-induced protein 26 [Arabidopsis thaliana]
 gi|20372805|emb|CAD30210.1| putative auxin-induced protein 30 [Arabidopsis thaliana]
          Length = 454

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 2/93 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 327 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 385

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 781
           D++L+GDDPW+ F   V  I I + E+V+KM +
Sbjct: 386 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNQ 418


>gi|449475565|ref|XP_004154491.1| PREDICTED: uncharacterized protein LOC101227484 [Cucumis sativus]
          Length = 180

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 57/78 (73%), Gaps = 3/78 (3%)

Query: 7  GLCQQGHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP 66
          G  ++G EG++  L  ELW ACAGPLV +P  G RV YFPQGH EQ+  +TN+E++  IP
Sbjct: 9  GESRKGLEGED--LYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIP 66

Query: 67 NYPNLPPQLICQLHNVTM 84
          ++ +LPP+++C++ N+ +
Sbjct: 67 HF-DLPPKILCRVVNIRL 83


>gi|12484201|gb|AAG53999.1|AF336918_1 ARF2 [Arabidopsis thaliana]
 gi|225879150|dbj|BAH30645.1| hypothetical protein [Arabidopsis thaliana]
          Length = 454

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 327 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 385

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 386 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 416


>gi|359473594|ref|XP_002273120.2| PREDICTED: uncharacterized protein LOC100266020 [Vitis vinifera]
          Length = 1203

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 49/61 (80%)

Query: 217 EKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEF 276
           E+  LL G+RRA R  T +PSSVLS+DS+HIG+LAA +HAAA  S FT+F+NPRA PS+F
Sbjct: 500 EQKPLLFGVRRANRQQTSLPSSVLSTDSLHIGVLAATSHAAANRSPFTIFYNPRACPSKF 559

Query: 277 V 277
           +
Sbjct: 560 I 560



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 25/35 (71%)

Query: 724  MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 758
            M G+E    D   S W++V+VD ENDVLL+GDDPW
Sbjct: 994  MLGVEDVLNDEKGSSWKMVYVDYENDVLLVGDDPW 1028


>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
          Length = 120

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 296 MRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWE 355
           MRFRM FETE+++ RR  G I GISD+DPVRW  S WR + V WD+  A  R  RVS WE
Sbjct: 1   MRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEAARRN-RVSPWE 59

Query: 356 IEPLTTFPMYPSLFPLRLKR 375
           IEP  +     +L    LKR
Sbjct: 60  IEPSGSASNSSNLMSAGLKR 79


>gi|449516481|ref|XP_004165275.1| PREDICTED: auxin response factor 9-like, partial [Cucumis sativus]
          Length = 342

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 691 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 749
           R+  KV+  G +VGR++D++RF+ Y++L  +L +MF IEG+    L+  WQ+V+ D E+D
Sbjct: 217 RSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSLKK-WQVVYTDDEDD 275

Query: 750 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           ++L+GDDPW  F S V  I I + E+V+++
Sbjct: 276 MMLVGDDPWNEFCSMVRKIFIYTTEEVKRL 305


>gi|414868950|tpg|DAA47507.1| TPA: hypothetical protein ZEAMMB73_035781, partial [Zea mays]
          Length = 78

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 3/49 (6%)

Query: 14 EGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV---AATTNK 59
          +G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQV   A + NK
Sbjct: 16 DGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVGHSAVSLNK 64


>gi|194708604|gb|ACF88386.1| unknown [Zea mays]
 gi|413920951|gb|AFW60883.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 379

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 245 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 303

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 792
           D++L+GDDPW  F S V  I + + E+VQ+M    + S    SG
Sbjct: 304 DMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSRPEDSG 347


>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
 gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
 gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
 gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
          Length = 109

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 6/79 (7%)

Query: 266 FFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR-----YMGTITGIS 320
           F   RAS SEF IP  K++K++  +  S GMRF+M FETE+++ RR     Y G ITG+S
Sbjct: 23  FLPCRASSSEFTIPFNKFLKSLDQS-FSSGMRFKMCFETEDAAERRFAIHGYTGIITGVS 81

Query: 321 DLDPVRWSNSHWRSVKVGW 339
           +LDP RW  S W+ + V W
Sbjct: 82  ELDPARWPGSKWKCLLVSW 100


>gi|62321072|dbj|BAD94156.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 313

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 6/161 (3%)

Query: 623 NSVVFGVHIDSSGLLLPTTVSSFTTSVD---PGVSSMPLGDSGFHNSMYGCMQDSSELLH 679
           N  +FG+ + SS L +P   ++    ++   P + S     S          Q+ +E   
Sbjct: 127 NYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSP 186

Query: 680 NVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 738
              Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+     R+ 
Sbjct: 187 KEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--RNQ 244

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           W++VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 245 WEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 285


>gi|413926488|gb|AFW66420.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
          Length = 94

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 37/38 (97%)

Query: 16 DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV 53
          ++KCLNSELWHACAGPLVSLP+VG+RVVYFPQGH EQV
Sbjct: 23 EHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQV 60


>gi|357487803|ref|XP_003614189.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
 gi|355515524|gb|AES97147.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
          Length = 373

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 110/256 (42%), Gaps = 75/256 (29%)

Query: 529 SFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSG---AGPSMLRQQFPQQSLGS 585
           SFS    +  S +I  S +   ++L   P+G G LLN S    +G  ++ +Q PQQS   
Sbjct: 189 SFSGQGLVGHSFDIGESHNNHSSLL--CPKGKGKLLNPSSLPSSGQLLMNEQLPQQSWTP 246

Query: 586 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 645
           +Y+  QV  F ++MS  + Y G+D+A    + + D QN ++ GV  DSS LLLPT     
Sbjct: 247 RYQNMQVDTFGNAMS-HAQYFGQDSATVPPHFDLDVQNHILLGVDFDSSDLLLPTI---- 301

Query: 646 TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELL-HNVGQIDQLTPTRTFVKVYKSGSVGR 704
                                      DSS+LL   +   D L PT            G 
Sbjct: 302 ---------------------------DSSDLLLPTIDSSDLLLPTTIPGYTTSLCETGA 334

Query: 705 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 764
           S              +LG+ FG EG                         DDPWE+F+++
Sbjct: 335 ST------------MQLGE-FGFEG------------------------FDDPWESFMNS 357

Query: 765 VWYIKILSPEDVQKMG 780
           +W+ +ILSPED+QK+G
Sbjct: 358 IWHDEILSPEDIQKIG 373


>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
 gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
          Length = 354

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 32/268 (11%)

Query: 97  MTLQPLSPEEQKDTFVPIELGIPSKQPTNY---FCKTLTASD-TSTHGGFSVPRR-AAEK 151
           M+L P++ ++      P + G  S Q       F K LT +D       F VP+R  A  
Sbjct: 1   MSLIPVARDQAIQPQAPADPGPSSPQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMG 60

Query: 152 VFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV 211
           V P L  +   P   L  +D+H  EW   + ++     H+L++GW  F +A RLV GD+V
Sbjct: 61  VLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANANRLVTGDNV 115

Query: 212 LFIWN-EKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPR 270
           +F+ + +  +  +G+RR ++P  V    V+            A   AA    F V +  R
Sbjct: 116 VFMRSMDSGERYMGLRRTLKPEPVSVDEVIE-----------AVWRAARLEPFEVTYLSR 164

Query: 271 ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY--MGTITGISDLDPVRWS 328
               EFV+P    V      + + GM    ++  EE  +      G +  I +     ++
Sbjct: 165 QDGDEFVVP-CGIVHNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAIEN-----YA 218

Query: 329 NSHWRSVKVGWDESTAGERQPRVSLWEI 356
            S WR ++V W       R   V+ W+I
Sbjct: 219 TSIWRMIQVEWPSCAGMNRY--VNFWQI 244


>gi|359474692|ref|XP_003631516.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATG1-like [Vitis vinifera]
          Length = 548

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 50/73 (68%)

Query: 724 MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 783
           MFG+EG   D   S W++V+VD ENDVLL+GDDP   FV  V  I+ILSP +VQ+M E+G
Sbjct: 429 MFGLEGVLNDQKGSSWKMVYVDYENDVLLVGDDPQNEFVGCVRCIRILSPSEVQQMSEEG 488

Query: 784 VESFSPSSGQRAN 796
           ++  + ++ +  N
Sbjct: 489 MQLLNSTTIEGIN 501


>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
 gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
          Length = 91

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 42/61 (68%)

Query: 153 FPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVL 212
           F  LD++ +PP + ++A+D+H   WKFRHI+RG P+RHLL TGWS FV+ K    G  + 
Sbjct: 10  FSRLDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLC 69

Query: 213 F 213
           F
Sbjct: 70  F 70


>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 216

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 260 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 319
            SC  V F   A+ +EFVIP  KY+ ++    + +G RF M FE  +S   R  G + G+
Sbjct: 88  TSCDVVLF--LATHAEFVIPYEKYITSI-RNPICIGTRFIMRFEMNDSP-ERCAGVVAGV 143

Query: 320 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHP 379
            DLDP RW NS W         S   + Q RVSLWEI+P  +    P L      RPW  
Sbjct: 144 YDLDPYRWPNSKWCD-----GMSLVSDHQERVSLWEIDPSVSL---PHLSIQSSPRPWEI 195

Query: 380 S-TSSFNDNRDETASGLNWLR 399
             +S+F    D    GL  LR
Sbjct: 196 DPSSTFAGILDHYIGGLRSLR 216


>gi|218191398|gb|EEC73825.1| hypothetical protein OsI_08552 [Oryza sativa Indica Group]
          Length = 113

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query: 18 KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVA 54
          KCLN ELWHAC+ PLV LP+VGTRVVYFPQGHSEQV+
Sbjct: 25 KCLNLELWHACSSPLVCLPSVGTRVVYFPQGHSEQVS 61


>gi|222623484|gb|EEE57616.1| hypothetical protein OsJ_08008 [Oryza sativa Japonica Group]
          Length = 140

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query: 18 KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVA 54
          KCLN ELWHAC+ PLV LP+VGTRVVYFPQGHSEQV+
Sbjct: 25 KCLNLELWHACSSPLVCLPSVGTRVVYFPQGHSEQVS 61


>gi|110739728|dbj|BAF01771.1| auxin response factor-like protein [Arabidopsis thaliana]
          Length = 194

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 80  SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQL--LARDKWIVVFTDDEG 137

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 779
           D++L GDDPW  F      I I S ++V+KM
Sbjct: 138 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 168


>gi|304308163|gb|ADL70394.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 188

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 762
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|298112255|gb|ADB96374.2| auxin response factor 11 [Arabidopsis thaliana]
          Length = 185

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 762
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|304308179|gb|ADL70402.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 187

 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 762
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|304308169|gb|ADL70397.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 188

 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 762
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|304308157|gb|ADL70391.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308165|gb|ADL70395.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308167|gb|ADL70396.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 185

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 762
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|304308173|gb|ADL70399.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 192

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 762
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|284811273|gb|ADB96375.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|284811275|gb|ADB96376.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|284811277|gb|ADB96377.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308159|gb|ADL70392.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308161|gb|ADL70393.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308175|gb|ADL70400.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308181|gb|ADL70403.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 183

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 5/103 (4%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 761
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEF 183


>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
          Length = 690

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD +L  P Q L   D+    W+FR+ +   
Sbjct: 199 FEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFEDVSGKHWRFRYSYWNS 257

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAI 229
            + ++ T GWS F+  K+L AGD+V F      +L +  RR +
Sbjct: 258 SQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFRRRL 300



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 119 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 178
           P+ Q  + F K +T SD        +P++ AE+ FP LD +L  P Q L   D+    W+
Sbjct: 64  PTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVPCQTLSFEDVSGKHWR 122

Query: 179 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAI 229
           FR+ +    + ++ T  WS F+  K+L AGD+V F      +L +  RR +
Sbjct: 123 FRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYIDFRRRL 173


>gi|284811269|gb|ADB96373.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308171|gb|ADL70398.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308177|gb|ADL70401.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 180

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 5/100 (5%)

Query: 660 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 718
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 719 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 758
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPW 180


>gi|361069823|gb|AEW09223.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171017|gb|AFG68785.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171018|gb|AFG68786.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171019|gb|AFG68787.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171020|gb|AFG68788.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171021|gb|AFG68789.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171022|gb|AFG68790.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171023|gb|AFG68791.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171024|gb|AFG68792.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171025|gb|AFG68793.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171026|gb|AFG68794.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171027|gb|AFG68795.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171028|gb|AFG68796.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171029|gb|AFG68797.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171030|gb|AFG68798.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171031|gb|AFG68799.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171032|gb|AFG68800.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
          Length = 89

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 4/62 (6%)

Query: 23 ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
          ELWHACAGPL+SLP  GT VVYFPQGH EQ + +  ++    +  Y  LPPQ+ C++ NV
Sbjct: 32 ELWHACAGPLISLPRKGTLVVYFPQGHLEQASTSLKQQ---QMRPY-ELPPQIFCRVLNV 87

Query: 83 TM 84
           +
Sbjct: 88 NL 89


>gi|168034769|ref|XP_001769884.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678790|gb|EDQ65244.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 84

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 41/58 (70%)

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFS 788
            ED  +S W++VFVD END LLLGD+PWE FVS V  IKILSP +V +M +  + + S
Sbjct: 1   MEDSQQSSWKIVFVDNENDTLLLGDEPWEEFVSCVRSIKILSPAEVAQMNQHVLAAVS 58


>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 269

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S   P Q L   D+    W+FR+ +   
Sbjct: 165 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYWNS 223

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 227
            + ++LT GWS FV  K+L AGD V F      +L +  RR
Sbjct: 224 SQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFRR 264


>gi|357489187|ref|XP_003614881.1| Auxin response factor [Medicago truncatula]
 gi|355516216|gb|AES97839.1| Auxin response factor [Medicago truncatula]
          Length = 356

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 9/142 (6%)

Query: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 134
           L C +  V +  D  TDEV+A++ L PL+ +E      P+  G       N      T +
Sbjct: 7   LPCIISAVNLFVDALTDEVFAKLLLTPLTAQEPPPP-PPVVPGQEDDDGNNLVSYFKTLT 65

Query: 135 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194
            T T   F++    A+ +FP LD      +Q +I  DL   EW   ++     K   L T
Sbjct: 66  TTETKSVFNISHECADLIFPKLDLE---KSQIIIVTDLKSQEWGCTYV-----KNSRLRT 117

Query: 195 GWSVFVSAKRLVAGDSVLFIWN 216
           GWS F   K+LVA DSV+F+ N
Sbjct: 118 GWSHFRKEKKLVAKDSVVFMKN 139


>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
 gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 4/124 (3%)

Query: 263 FTVFFNPRAS-PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGIS 320
           F V + PRA   S+FV+   + V+A      + GMR +M  ETE+SS +  + GT++G  
Sbjct: 25  FDVVYYPRAGWYSDFVV-RAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTG 83

Query: 321 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPS 380
             D   W  S WR +++ WDE    +   RVS W++E + T P   + FP  +K+  +P+
Sbjct: 84  LPDSGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVEFVATTPQLQAAFP-PMKKLRYPN 142

Query: 381 TSSF 384
            S F
Sbjct: 143 DSRF 146


>gi|413920950|gb|AFW60882.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 314

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 2/71 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 245 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 303

Query: 749 DVLLLGDDPWE 759
           D++L+GDDPW+
Sbjct: 304 DMMLVGDDPWK 314


>gi|168028298|ref|XP_001766665.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682097|gb|EDQ68518.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 52

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 39/52 (75%)

Query: 731 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
            EDP +S W +V+VD END LLLGD PWEAFVS V  IKILSP +V +M ++
Sbjct: 1   MEDPQQSDWLIVYVDNENDTLLLGDGPWEAFVSCVRSIKILSPVEVAQMSQE 52


>gi|302762190|ref|XP_002964517.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
 gi|300168246|gb|EFJ34850.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
          Length = 335

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 7/112 (6%)

Query: 702 VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 761
           +GR+LD+ +F  Y EL EEL  +FGI+        S WQ V+VD E D+LL+GDDPW  F
Sbjct: 158 MGRALDLRKFRGYRELLEELQHLFGIDKNLNG---SEWQAVYVDNEGDMLLVGDDPWGVF 214

Query: 762 V-SNVWYIKIL-SPEDVQKMGEQGVESFS--PSSGQRANSRGNCGRDPVGSL 809
               V +   + S  ++QK+  Q   S +  PSS        +  R P G L
Sbjct: 215 TFQGVLHDGAMHSAAEIQKLTVQARNSSTEEPSSRLSDQQDSSSPRRPTGCL 266



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 20/29 (68%)

Query: 311 RYMGTITGISDLDPVRWSNSHWRSVKVGW 339
           RYMGTITGI D+DP RW  S WR  K  W
Sbjct: 55  RYMGTITGIGDIDPARWPGSKWRFPKCSW 83


>gi|353441048|gb|AEQ94108.1| putative auxin response transcription factor 1 [Elaeis
          guineensis]
          Length = 58

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 46/57 (80%), Gaps = 1/57 (1%)

Query: 43 VYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTL 99
          +YFPQGH EQ+ A+TN+ +D H+P + NLP +++C++ +V + A+ +TDEVYAQ+T+
Sbjct: 1  IYFPQGHMEQLEASTNQGLDQHMPLF-NLPSKILCRVVHVQLRAEPDTDEVYAQITI 56


>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 227

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S   P Q L   D+    W+FR+ +   
Sbjct: 131 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYWNS 189

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLL 223
            + ++LT GWS FV  K+L AGD V F     ++L +
Sbjct: 190 SQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226


>gi|80750878|dbj|BAE48151.1| auxin response factor 3 [Arabidopsis thaliana]
          Length = 100

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 18/76 (23%)

Query: 15  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----N 70
           G   CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ             P++      
Sbjct: 39  GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQA------------PDFSAAIYG 84

Query: 71  LPPQLICQLHNVTMHA 86
           LPP + C++ +V +HA
Sbjct: 85  LPPHVFCRILDVKLHA 100


>gi|304308275|gb|ADL70450.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308285|gb|ADL70455.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 224

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 157 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 214

Query: 749 DVLLLGDDPW 758
           D++L GDDPW
Sbjct: 215 DMMLAGDDPW 224


>gi|304308269|gb|ADL70447.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 225

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 158 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 215

Query: 749 DVLLLGDDPW 758
           D++L GDDPW
Sbjct: 216 DMMLAGDDPW 225


>gi|304308263|gb|ADL70444.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308267|gb|ADL70446.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308271|gb|ADL70448.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308273|gb|ADL70449.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308277|gb|ADL70451.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308279|gb|ADL70452.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308281|gb|ADL70453.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308283|gb|ADL70454.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 225

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 158 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 215

Query: 749 DVLLLGDDPW 758
           D++L GDDPW
Sbjct: 216 DMMLAGDDPW 225


>gi|304308287|gb|ADL70456.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 225

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 158 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 215

Query: 749 DVLLLGDDPW 758
           D++L GDDPW
Sbjct: 216 DMMLAGDDPW 225


>gi|284811299|gb|ADB96388.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|284811301|gb|ADB96389.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|284811305|gb|ADB96391.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|284811307|gb|ADB96392.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 222

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 155 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 212

Query: 749 DVLLLGDDPW 758
           D++L GDDPW
Sbjct: 213 DMMLAGDDPW 222


>gi|304308265|gb|ADL70445.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 226

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 159 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 216

Query: 749 DVLLLGDDPW 758
           D++L GDDPW
Sbjct: 217 DMMLAGDDPW 226


>gi|298113241|gb|ADB96390.2| auxin response factor 18 [Arabidopsis thaliana]
          Length = 231

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 164 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 221

Query: 749 DVLLLGDDPW 758
           D++L GDDPW
Sbjct: 222 DMMLAGDDPW 231



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 5/59 (8%)

Query: 330 SHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM-YPSLFP---LRLKRPWHPSTSS 383
           S WRS++V WDE T  +R  +VS WEIEP L T P+  P+  P    +  RP  PS  +
Sbjct: 3   SKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKT 61


>gi|62865710|gb|AAY17049.1| p-167-u3_1 [Pinus resinosa]
          Length = 83

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF--SPSSGQRANSRG 799
           VFVD+E DVLLLGDDPWE FV+NV +I ILSP +V  M ++ +E +   P+    ++S  
Sbjct: 1   VFVDKEKDVLLLGDDPWEEFVNNVRFIXILSPPEVLXMXQEDMEXWXSXPTXXXTSSSSE 60

Query: 800 NC 801
           +C
Sbjct: 61  DC 62


>gi|224085810|ref|XP_002307705.1| predicted protein [Populus trichocarpa]
 gi|222857154|gb|EEE94701.1| predicted protein [Populus trichocarpa]
          Length = 53

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/37 (67%), Positives = 32/37 (86%)

Query: 724 MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 760
           MFG++G   +P RSGW+LV+VD ENDVLL+GDDPW+A
Sbjct: 1   MFGLDGLLNNPKRSGWKLVYVDYENDVLLIGDDPWDA 37


>gi|62865712|gb|AAY17050.1| p-167-u4_1 [Pinus resinosa]
          Length = 83

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 38/44 (86%)

Query: 742 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
           VFVD+ENDVLLLGDDPWE FV++V  I+ILSP +V +M ++G+E
Sbjct: 1   VFVDKENDVLLLGDDPWEEFVNSVRSIRILSPPEVLQMTQEGME 44


>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 203

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 30/117 (25%)

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
           + M  G++A+  +A  T   F V + PR                             M F
Sbjct: 1   NCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQF 31

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           E ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  EGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 87


>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 173

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 189

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 176

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 183

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 30/117 (25%)

Query: 243 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 302
           + M  G++A+  +A  T   F V + PR                             M F
Sbjct: 1   NCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQF 31

Query: 303 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           E ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  EGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 87


>gi|294460143|gb|ADE75654.1| unknown [Picea sitchensis]
 gi|294464227|gb|ADE77628.1| unknown [Picea sitchensis]
          Length = 96

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 724 MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           MF IEG+  +P + GWQ+V+ D E D++L+GDDPW+ F S V  I I + E+V+KM  Q
Sbjct: 1   MFNIEGELGNPSK-GWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIFIYTREEVEKMTPQ 58


>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 187

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 30/115 (26%)

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           M  G++A+  +A  T   F V + PR                             M FE 
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQFEG 32

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 33  KDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 86


>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 188

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 30/115 (26%)

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           M  G++A+  +A  T   F V + PR                             M FE 
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQFEG 32

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 33  KDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 86


>gi|85069285|gb|ABC69714.1| ARF2-like protein [Nicotiana tabacum]
          Length = 264

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 690 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           +R+  KV K G ++GRS+D+SR   Y EL  EL ++FG EG   D  +  W + + DRE 
Sbjct: 171 SRSCTKVLKYGCALGRSIDMSRVKGYGELISELDKLFGFEGSLLDGSKD-WHVTYQDREG 229

Query: 749 DVLLLGDDPW 758
           +  LLGD PW
Sbjct: 230 NTKLLGDYPW 239


>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 188

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 30/115 (26%)

Query: 245 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 304
           M  G++A+  +A  T   F V + PR                             M FE 
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQFEG 32

Query: 305 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
            + S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 33  NDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 86


>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
 gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
          Length = 253

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K LT SD        VP++ AE+ FP+     Q     L  +D     W+FR+ + G 
Sbjct: 57  FDKVLTPSDVGKLNRLVVPKQHAERFFPAAGAGTQ-----LCFQDCGGALWQFRYSYWGS 111

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV A RL AGD+V F
Sbjct: 112 SQSYVMTKGWSRFVRAARLAAGDTVTF 138


>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 175

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +V  W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHL 88


>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 168

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 3/78 (3%)

Query: 284 VKAVFHTRV--SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDE 341
           V   F T+   +V  + RM FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE
Sbjct: 4   VVNAFKTKCMFNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDE 62

Query: 342 STAGERQPRVSLWEIEPL 359
            +   R  +VS W+IE L
Sbjct: 63  LSPFLRPNQVSPWDIEHL 80


>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 180

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 3/78 (3%)

Query: 284 VKAVFHTRVSVGMRF--RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDE 341
           V   F T+    + +  RM FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE
Sbjct: 5   VVNAFKTKCMFNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDE 63

Query: 342 STAGERQPRVSLWEIEPL 359
            +   R  +VS W+IE L
Sbjct: 64  LSPFLRPNQVSPWDIEHL 81


>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           FE ++ S +RY GTI G++D+ P  W +S W+S+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)

Query: 242 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 301
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 302 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +V  W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHL 88


>gi|15228649|ref|NP_191756.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
           thaliana]
 gi|75182616|sp|Q9M268.1|NGA2_ARATH RecName: Full=B3 domain-containing transcription factor NGA2;
           AltName: Full=Protein NGATHA 2
 gi|6899895|emb|CAB71904.1| RAV-like protein [Arabidopsis thaliana]
 gi|108385265|gb|ABF85768.1| At3g61970 [Arabidopsis thaliana]
 gi|227060687|gb|ACP18972.1| NGATHA2 [Arabidopsis thaliana]
 gi|332646767|gb|AEE80288.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
           thaliana]
          Length = 299

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 6/131 (4%)

Query: 107 QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 166
           Q+D   PIE    S +  + F K +T SD        +P++ AE+ FP LD S    + +
Sbjct: 3   QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNK 61

Query: 167 LIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQL 221
            +  +  D     W+FR+ +    + +++T GWS FV  K+L AGD V F  +   K++L
Sbjct: 62  GLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKL 121

Query: 222 LLGIRRAIRPP 232
            +  RR  + P
Sbjct: 122 YIDWRRRPKIP 132


>gi|26450371|dbj|BAC42301.1| putative RAV [Arabidopsis thaliana]
          Length = 299

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 6/131 (4%)

Query: 107 QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 166
           Q+D   PIE    S +  + F K +T SD        +P++ AE+ FP LD S    + +
Sbjct: 3   QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNK 61

Query: 167 LIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQL 221
            +  +  D     W+FR+ +    + +++T GWS FV  K+L AGD V F  +   K++L
Sbjct: 62  GLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKL 121

Query: 222 LLGIRRAIRPP 232
            +  RR  + P
Sbjct: 122 YIDWRRRPKIP 132


>gi|356537126|ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 337

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIA--RDLHDVEWKFRHIFR 184
           F K LT SD        +P++ AEK FP    S     + L+    D     W+FR+ + 
Sbjct: 73  FEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSFEDESGKCWRFRYSYW 132

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPPTVMPSSVLSS 242
              + ++LT GWS +V  KRL AGD VLF  +  +  +L +G RR  +    +P + +SS
Sbjct: 133 NSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRRRRQSDAALPPAHVSS 192


>gi|297817532|ref|XP_002876649.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322487|gb|EFH52908.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 304

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 6/131 (4%)

Query: 107 QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 166
           Q+D   PIE    S +  + F K +T SD        +P++ AE+ FP LD S      +
Sbjct: 3   QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDNNK 61

Query: 167 LIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQL 221
            +  +  D     W+FR+ +    + +++T GWS FV  K+L AGD V F  +   K++L
Sbjct: 62  GLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSGNKDKL 121

Query: 222 LLGIRRAIRPP 232
            +  RR  + P
Sbjct: 122 YIDWRRRPKIP 132


>gi|297834672|ref|XP_002885218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331058|gb|EFH61477.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCAFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPE 774
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKITRPE 156


>gi|304308189|gb|ADL70407.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 169

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 293 SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVS 352
           +V  + RM FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS
Sbjct: 2   NVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVS 60

Query: 353 LWEIEPL 359
            W+IE L
Sbjct: 61  PWDIEHL 67


>gi|365818563|gb|AEX00370.1| IAA35 [Solanum lycopersicum]
          Length = 196

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 5/84 (5%)

Query: 693 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
           +VKV   G  + R +D++ F SYN+L + L  MFG   +  D     ++L + D+E D L
Sbjct: 116 YVKVKMEGVGIARKIDLTLFHSYNKLTDTLISMFGKNKEIGDV----YKLTYQDKEGDWL 171

Query: 752 LLGDDPWEAFVSNVWYIKILSPED 775
           L GD PW  FV +V  +K++  ED
Sbjct: 172 LAGDVPWRTFVGSVQRLKLIRDED 195


>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
          Length = 249

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K LT SD        VP++ AE+ FP+        + +L  +D     W+FR+ + G 
Sbjct: 61  FDKVLTPSDVGKLNRLVVPKQHAERFFPAAG----AGSTQLCFQDRGGALWQFRYSYWGS 116

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
            + +++T GWS FV A RL AGD+V F  +   +  +  R   R
Sbjct: 117 SQSYVMTKGWSRFVRAARLAAGDTVTFSRSGGGRYFIEYRHCQR 160


>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 4/143 (2%)

Query: 216 NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSE 275
           N  ++L +G+RR  R       S  SS  +    +A AA  AA    F V + PR   S+
Sbjct: 4   NSNSELFIGVRRDARWNRNGERS--SSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSD 61

Query: 276 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 334
           FV+   + V+       + GMR +M  ETE+SS    + GT++  + +D   W  S WR 
Sbjct: 62  FVVK-AEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRM 120

Query: 335 VKVGWDESTAGERQPRVSLWEIE 357
           ++V WDE    +   RVS W++E
Sbjct: 121 LQVTWDEPEVLQNVMRVSPWQVE 143


>gi|297740162|emb|CBI30344.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 12/167 (7%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K LT SD        +P++ AEK FP L          L   D     W+FR+ +   
Sbjct: 2   FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFRYSYWNS 60

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
            + ++LT GWS FV  KRL AGD VLF  +  + ++  +G RR   P    P++      
Sbjct: 61  SQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRRAGPAQDNPAAAPP--- 117

Query: 245 MHIGLLAAAAHAAATNSCFT-VFFNPRASPSEFVIPLTKYVKAVFHT 290
                +A   +   T+  +T VF++  A PS    P   Y     H 
Sbjct: 118 -----VAVHTNTGNTSVGWTRVFYSAHAYPSHPHAPPLPYQPDCLHA 159


>gi|304322699|gb|ADL70802.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 158

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPE 774
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKITRPE 156


>gi|304322701|gb|ADL70803.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 151

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 64  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 123

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPE 774
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 124 DWMMVGDIPWDMFLETVRRLKITRPE 149


>gi|304322697|gb|ADL70801.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 158

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPE 774
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKITRPE 156


>gi|15229074|ref|NP_188387.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
 gi|46395870|sp|Q8H174.2|IAA31_ARATH RecName: Full=Auxin-responsive protein IAA31; AltName:
           Full=Indoleacetic acid-induced protein 31
 gi|9294148|dbj|BAB02050.1| unnamed protein product [Arabidopsis thaliana]
 gi|15810012|gb|AAL06933.1| AT3g17600/MKP6_15 [Arabidopsis thaliana]
 gi|49616379|gb|AAT67086.1| IAA31 [Arabidopsis thaliana]
 gi|298108635|gb|ADB93680.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|298108639|gb|ADB93682.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|298108641|gb|ADB93683.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322703|gb|ADL70804.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322705|gb|ADL70805.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322707|gb|ADL70806.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322709|gb|ADL70807.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322713|gb|ADL70809.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322715|gb|ADL70810.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322717|gb|ADL70811.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322719|gb|ADL70812.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|332642452|gb|AEE75973.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
          Length = 158

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPE 774
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKITRPE 156


>gi|298108643|gb|ADB93684.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 155

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 70  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 129

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPE 774
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 130 DWMMVGDIPWDMFLETVRRLKITRPE 155


>gi|304322695|gb|ADL70800.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322711|gb|ADL70808.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 157

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 70  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 129

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPE 774
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 130 DWMMVGDIPWDMFLETVRRLKITRPE 155


>gi|298108637|gb|ADB93681.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 138

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 51  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 110

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPE 774
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 111 DWMMVGDIPWDMFLETVRRLKITRPE 136


>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
 gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
          Length = 262

 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S       L   D+    W+FR+ +   
Sbjct: 159 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYWNS 217

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 227
            + ++LT GWS FV  K+L AGD V F      +L +  RR
Sbjct: 218 SQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 258


>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
 gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
          Length = 261

 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S       L   D+    W+FR+ +   
Sbjct: 158 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYWNS 216

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 227
            + ++LT GWS FV  K+L AGD V F      +L +  RR
Sbjct: 217 SQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 257


>gi|312282513|dbj|BAJ34122.1| unnamed protein product [Thellungiella halophila]
          Length = 249

 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 14/93 (15%)

Query: 693 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMF--------GIEGKFEDPLR-----SG 738
           F+KV   G ++GR +D++  SSY  L + L  MF        G+ G+F  PLR     S 
Sbjct: 133 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRNNPGTIGLTGQFTKPLRLLDGSSE 192

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 771
           + L + D+E D +L+GD PW  F+++V  ++++
Sbjct: 193 FVLTYEDKEGDWMLVGDVPWRMFITSVKRLRVM 225


>gi|242062916|ref|XP_002452747.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
 gi|241932578|gb|EES05723.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
          Length = 434

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 103 FDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRYSYWNS 161

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  KRLVAGD+V F
Sbjct: 162 SQSYVMTKGWSRFVKEKRLVAGDTVSF 188


>gi|449445748|ref|XP_004140634.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
           [Cucumis sativus]
 gi|449515921|ref|XP_004164996.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
           [Cucumis sativus]
          Length = 354

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D H   W+FR+ +   
Sbjct: 94  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLILNFEDRHGKPWRFRYSYWNS 152

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 153 SQSYVMTKGWSRFVKEKKLDAGDIVSF 179


>gi|359482026|ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g36080-like [Vitis
           vinifera]
          Length = 346

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 12/167 (7%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K LT SD        +P++ AEK FP L          L   D     W+FR+ +   
Sbjct: 109 FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFRYSYWNS 167

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
            + ++LT GWS FV  KRL AGD VLF  +  + ++  +G RR   P    P++      
Sbjct: 168 SQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRRAGPAQDNPAAAPP--- 224

Query: 245 MHIGLLAAAAHAAATNSCFT-VFFNPRASPSEFVIPLTKYVKAVFHT 290
                +A   +   T+  +T VF++  A PS    P   Y     H 
Sbjct: 225 -----VAVHTNTGNTSVGWTRVFYSAHAYPSHPHAPPLPYQPDCLHA 266


>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
           thaliana]
 gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
           AltName: Full=Protein NGATHA3
 gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
 gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
 gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
           thaliana]
          Length = 358

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 22/205 (10%)

Query: 118 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
           IP  +  + F K +T SD        +P++ AE+ FP LD S       L  +D +   W
Sbjct: 47  IPPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMW 105

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF---IWNEKNQLLLGIRRAIRPPTV 234
           +FR+ +    + +++T GWS FV  K+L AGD V F   I +E  +  L I    RP   
Sbjct: 106 RFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPD-- 163

Query: 235 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSV 294
                +S    H            T S ++  F+          PL +Y     H  +++
Sbjct: 164 -----MSLVQAHQFGNFGFNFNFPTTSQYSNRFH----------PLPEYNSVPIHRGLNI 208

Query: 295 GMRFRMLFETEESSVRRY-MGTITG 318
           G   R  + T+      Y  G + G
Sbjct: 209 GNHQRSYYNTQRQEFVGYGYGNLAG 233


>gi|308080706|ref|NP_001183918.1| uncharacterized protein LOC100502511 [Zea mays]
 gi|238015438|gb|ACR38754.1| unknown [Zea mays]
 gi|413938267|gb|AFW72818.1| hypothetical protein ZEAMMB73_941356 [Zea mays]
          Length = 422

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 101 FDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRYSYWNS 159

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  KRLVAGD+V F
Sbjct: 160 SQSYVMTKGWSRFVKEKRLVAGDTVSF 186


>gi|449507228|ref|XP_004162969.1| PREDICTED: uncharacterized protein LOC101232454 [Cucumis sativus]
          Length = 347

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 21/131 (16%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S       L   D +   W+FR+ +   
Sbjct: 57  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYWNS 115

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRR--------------- 227
            + +++T GWS FV  KRL AGD V F        +++L +  RR               
Sbjct: 116 SQSYVMTKGWSRFVKEKRLDAGDIVSFQRGIGEIGRDRLYIDWRRRPELPIHHYPITTAT 175

Query: 228 -AIRPPTVMPS 237
            AIRP  V+PS
Sbjct: 176 TAIRPSIVIPS 186


>gi|449456452|ref|XP_004145963.1| PREDICTED: uncharacterized protein LOC101211271 [Cucumis sativus]
          Length = 336

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 21/131 (16%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S       L   D +   W+FR+ +   
Sbjct: 57  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYWNS 115

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRR--------------- 227
            + +++T GWS FV  KRL AGD V F        +++L +  RR               
Sbjct: 116 SQSYVMTKGWSRFVKEKRLDAGDIVSFQRGIGEIGRDRLYIDWRRRPELPIHHYPITTAT 175

Query: 228 -AIRPPTVMPS 237
            AIRP  V+PS
Sbjct: 176 TAIRPSIVIPS 186


>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
          Length = 404

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 5/152 (3%)

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ + 
Sbjct: 85  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYW 143

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTVMPSSVL 240
              + +++T GWS FV  KRL AGD+V F        +++L +  R+     +  P  +L
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRML 203

Query: 241 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRAS 272
               +H+  LA+             FF P A+
Sbjct: 204 PRLPLHMPPLASPYGYGPWGGGAGGFFVPPAT 235


>gi|356537192|ref|XP_003537113.1| PREDICTED: uncharacterized protein LOC100783474 [Glycine max]
          Length = 246

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query: 53  VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVET 90
           VAA+T +   S IPNYPNLP QL+CQ+ NVT+HAD ET
Sbjct: 191 VAASTRRTTTSQIPNYPNLPYQLLCQVQNVTLHADKET 228


>gi|23308285|gb|AAN18112.1| At3g17600/MKP6_15 [Arabidopsis thaliana]
          Length = 158

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 748
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 749 DVLLLGDDPWEAFVSNVWYIKILSPE 774
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKIPRPE 156


>gi|147768788|emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
          Length = 505

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 112 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYWNS 170

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 239
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    PSS+
Sbjct: 171 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRR--RPDAPEPSSL 225


>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
           [Brachypodium distachyon]
          Length = 213

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%)

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           +  + F K +T SD        +P++ AE+ FP LDF        L   +     W+FR+
Sbjct: 2   EKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDFDKGNGGIILSFEERGGKAWRFRY 60

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            +    + +++T GWS FV  KRL+AGD+VLF
Sbjct: 61  SYWNSSQSYVMTKGWSRFVKDKRLLAGDAVLF 92


>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 354

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 118 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 177
           IP  +  + F K +T SD        +P++ AE+ FP LD S       L  +D +   W
Sbjct: 44  IPPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMW 102

Query: 178 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
           +FR+ +    + +++T GWS FV  K+L AGD V F
Sbjct: 103 RFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSF 138


>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 322

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 7/114 (6%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 40  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYWNS 98

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTVMP 236
            + +++T GWS FV  KRL AGD+V F        + +L +  RR  RP  V+P
Sbjct: 99  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR--RPDVVLP 150


>gi|297826783|ref|XP_002881274.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327113|gb|EFH57533.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 241

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 17/116 (14%)

Query: 693 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMF--------GIEGKFEDPLR-----SG 738
           F+KV   G ++GR +D+S  SSY  L + L  MF        G+  +F  PLR     S 
Sbjct: 125 FIKVNMDGVAIGRKVDLSAHSSYENLSQTLEDMFFRTNPGTIGLTSQFTKPLRLLDGSSE 184

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 794
           + L + D+E D +L+GD PW  F+++V  ++++   +   +  +  E   P+  QR
Sbjct: 185 FVLTYEDKEGDWMLVGDVPWRMFITSVKRLRVMKTSEANGLAARNQE---PNERQR 237


>gi|195635917|gb|ACG37427.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
          Length = 289

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 22/120 (18%)

Query: 679 HNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLR 736
               + +Q T    FVK+   G  +GR +D+S   SY+EL   + ++F G+    +DPL 
Sbjct: 148 KKAAKPEQTTKRAPFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLA 207

Query: 737 SG--------------------WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
           +G                    + LV+ D E D +L+GD PW  FVS+V  +++L   D+
Sbjct: 208 AGAKECSQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267


>gi|356571279|ref|XP_003553806.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Glycine max]
          Length = 413

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           +  N F K +T SD        +P++ AEK FP LD S       L   D +   W+FR+
Sbjct: 85  EKENMFEKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKVWRFRY 143

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            +    + +++T GWS FV  K+L AGD V F
Sbjct: 144 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSF 175


>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
           vinifera]
          Length = 411

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 112 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYWNS 170

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 239
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    PSS+
Sbjct: 171 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRR--RPDAPEPSSL 225


>gi|356498733|ref|XP_003518204.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 344

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 7/130 (5%)

Query: 118 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP---SLDFSLQPPAQELIARDLHD 174
           I +K+P   F K LT SD        +P++ AEK FP       S +     L   D   
Sbjct: 68  INNKEPM--FEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGGDSGSSECKGLLLSFEDESG 125

Query: 175 VEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRRAIRPP 232
             W+FR+ +    + ++LT GWS +V  KRL AGD VLF  +  +  +L +G RR  +  
Sbjct: 126 KCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRADAQRLFIGWRRRRQSD 185

Query: 233 TVMPSSVLSS 242
            + P + +SS
Sbjct: 186 ALPPPAHVSS 195


>gi|304308105|gb|ADL70365.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308127|gb|ADL70376.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           Y GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP       P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASTSRPNKVSPWEIEPFVNSENVPKSVML 59

Query: 372 RLKRP 376
           + KRP
Sbjct: 60  KNKRP 64


>gi|302398541|gb|ADL36565.1| ABI3L domain class transcription factor [Malus x domestica]
          Length = 382

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 9/105 (8%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFP--SLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           F K LT SD        +P++ AEK FP  S D  L      L   D     W+FR+ + 
Sbjct: 122 FEKPLTPSDVGKLNRLVIPKQHAEKYFPLGSGDSGLL-----LSFEDESGKSWRFRYSYW 176

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRR 227
              + ++LT GWS +V  KRL AGD VLF     N  +L +G RR
Sbjct: 177 NSSQSYVLTKGWSRYVKEKRLNAGDVVLFERRRANTDRLSIGWRR 221


>gi|223943565|gb|ACN25866.1| unknown [Zea mays]
 gi|413936690|gb|AFW71241.1| IAA7-auxin-responsive Aux/IAA family member [Zea mays]
          Length = 289

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 22/114 (19%)

Query: 685 DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLRSG---- 738
           +Q T    FVK+   G  +GR +D+S   SY+EL   + ++F G+    +DPL +G    
Sbjct: 154 EQTTKRAPFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKEC 213

Query: 739 ----------------WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
                           + LV+ D E D +L+GD PW  FVS+V  +++L   D+
Sbjct: 214 SQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267


>gi|302822962|ref|XP_002993136.1| hypothetical protein SELMODRAFT_431277 [Selaginella moellendorffii]
 gi|300139027|gb|EFJ05776.1| hypothetical protein SELMODRAFT_431277 [Selaginella moellendorffii]
          Length = 124

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 3/63 (4%)

Query: 693 FVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 752
           F KV+K  +VGR+LD+S+F  Y +L EE   +FGI+   E+   S WQ ++VD E D+L 
Sbjct: 13  FSKVHKHNAVGRALDLSKFRGYTQLLEEPQHLFGID---ENLNESEWQAMYVDNEGDMLF 69

Query: 753 LGD 755
           +G+
Sbjct: 70  VGE 72


>gi|323388567|gb|ADX60088.1| AUX/IAA transcription factor [Zea mays]
          Length = 289

 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 22/114 (19%)

Query: 685 DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLRSG---- 738
           +Q T    FVK+   G  +GR +D+S   SY+EL   + ++F G+    +DPL +G    
Sbjct: 154 EQTTKRAPFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKEC 213

Query: 739 ----------------WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
                           + LV+ D E D +L+GD PW  FVS+V  +++L   D+
Sbjct: 214 SQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267


>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
          Length = 409

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +     Q L   D     W+FR+ +   
Sbjct: 94  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRYSYWNS 152

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  KRL AGD+V F
Sbjct: 153 SQSYVMTKGWSRFVKEKRLDAGDTVSF 179


>gi|297742476|emb|CBI34625.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 157 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYWNS 215

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 239
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    PSS+
Sbjct: 216 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRR--RPDAPEPSSL 270


>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
           [Brachypodium distachyon]
          Length = 413

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 16/127 (12%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 100 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 158

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSV-------------LFI-WNEKNQLLLGIRRAI-RP 231
            + +++T GWS FV  KRL AGD+V             LFI W  + +L+    R + R 
Sbjct: 159 SQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAAEATRDRLFIDWKRRAELIRDPHRGLARL 218

Query: 232 PTVMPSS 238
           P  MP+S
Sbjct: 219 PMPMPTS 225


>gi|125552982|gb|EAY98691.1| hypothetical protein OsI_20621 [Oryza sativa Indica Group]
          Length = 102

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 23 ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 82
          ELWHACAGP V+LP  G+ +VY PQ H     A      +        +PP + C++  V
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAH----LAADGGGGEVPPAGAAAVPPHVACRVVGV 78

Query: 83 TMHADVETDEVYAQMTL 99
           + AD  TDEVYA++ L
Sbjct: 79 ELRADAATDEVYARLAL 95


>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
          Length = 327

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD +       L   D     W+FR+ +   
Sbjct: 38  FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRYSYWNS 96

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTV 234
            + +++T GWS FV  KRL AGD+V F        + +L +  RR   PP V
Sbjct: 97  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDPPVV 148


>gi|304308125|gb|ADL70375.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           Y GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP  +    P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVSSENIPKSVML 59

Query: 372 RLKRP 376
           + KRP
Sbjct: 60  KNKRP 64


>gi|75139062|sp|Q7EZD5.1|Y8577_ORYSJ RecName: Full=Putative B3 domain-containing protein Os08g0157700
 gi|37806146|dbj|BAC99651.1| AP2 domain protein RAP2.8 (RAV2)-like [Oryza sativa Japonica Group]
 gi|125602248|gb|EAZ41573.1| hypothetical protein OsJ_26107 [Oryza sativa Japonica Group]
          Length = 287

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           + +  + F K +T SD        VP++ AE+ FP+          +L   D     W+F
Sbjct: 64  AAEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFPA-----AAAGTQLCFEDRAGTPWRF 118

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           R+ + G  + +++T GWS FV A RL AGD+V F      +  +  R   R
Sbjct: 119 RYSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHR 169


>gi|125560208|gb|EAZ05656.1| hypothetical protein OsI_27883 [Oryza sativa Indica Group]
          Length = 286

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           + +  + F K +T SD        VP++ AE+ FP+          +L   D     W+F
Sbjct: 64  AAEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFPA-----AAAGTQLCFEDRAGTPWRF 118

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 230
           R+ + G  + +++T GWS FV A RL AGD+V F      +  +  R   R
Sbjct: 119 RYSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHR 169


>gi|226504810|ref|NP_001149696.1| IAA12 - auxin-responsive Aux/IAA family member [Zea mays]
 gi|195629558|gb|ACG36420.1| IAA12 - auxin-responsive Aux/IAA family member [Zea mays]
          Length = 223

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 693 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
           FVKV   G+   R LD+  +  Y ELRE L  MF   G   D   S + + + D++ D++
Sbjct: 131 FVKVSMDGAPYLRKLDLRMYKGYRELREALEAMFVSSGSANDKNLSEFAVTYQDKDGDLM 190

Query: 752 LLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           L+GD P+E F S    ++I+   +   +G
Sbjct: 191 LVGDVPFEMFASTCRKLRIMKRSEATGLG 219


>gi|284811249|gb|ADB96363.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|284811251|gb|ADB96364.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|284811253|gb|ADB96365.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|284811257|gb|ADB96367.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308107|gb|ADL70366.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308111|gb|ADL70368.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308113|gb|ADL70369.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308115|gb|ADL70370.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308117|gb|ADL70371.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308119|gb|ADL70372.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308121|gb|ADL70373.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308123|gb|ADL70374.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308129|gb|ADL70377.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           Y GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP       P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVML 59

Query: 372 RLKRP 376
           + KRP
Sbjct: 60  KNKRP 64


>gi|30685642|ref|NP_850205.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
 gi|38503400|sp|Q38831.2|IAA13_ARATH RecName: Full=Auxin-responsive protein IAA13; AltName:
           Full=Indoleacetic acid-induced protein 13
 gi|29028860|gb|AAO64809.1| At2g33310 [Arabidopsis thaliana]
 gi|110742999|dbj|BAE99393.1| auxin regulated protein [Arabidopsis thaliana]
 gi|330253719|gb|AEC08813.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
          Length = 247

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)

Query: 693 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMF--------GIEGKFEDPLR-----SG 738
           F+KV   G ++GR +D++  SSY  L + L  MF        G+  +F  PLR     S 
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 794
           + L + D+E D +L+GD PW  F+++V  ++++   +   +  +  E   P+  QR
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE---PNERQR 243


>gi|15225833|ref|NP_180889.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
 gi|186504957|ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
 gi|12083208|gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana]
 gi|972929|gb|AAC49054.1| IAA13 [Arabidopsis thaliana]
 gi|2459414|gb|AAB80649.1| auxin regulated protein (IAA13) [Arabidopsis thaliana]
 gi|21537404|gb|AAM61745.1| auxin regulated protein IAA13 [Arabidopsis thaliana]
 gi|330253718|gb|AEC08812.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
 gi|330253720|gb|AEC08814.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
          Length = 246

 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)

Query: 693 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMF--------GIEGKFEDPLR-----SG 738
           F+KV   G ++GR +D++  SSY  L + L  MF        G+  +F  PLR     S 
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189

Query: 739 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 794
           + L + D+E D +L+GD PW  F+++V  ++++   +   +  +  E   P+  QR
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE---PNERQR 242


>gi|225453662|ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Vitis vinifera]
          Length = 461

 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 139 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYWNS 197

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 239
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    P+S+
Sbjct: 198 SQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRR--RPDAPDPTSL 252


>gi|449457654|ref|XP_004146563.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Cucumis sativus]
          Length = 345

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 67  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRCGKLWRFRYSYWTS 125

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF---IWNEKNQLLLGIRRAIRPP 232
            + +++T GWS FV  KRL AGD V F   +   +++  +  RR  RPP
Sbjct: 126 SQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRR--RPP 172


>gi|304308109|gb|ADL70367.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           Y GT+ G+ D  P  W +S WR ++V WDE     R  +VS WEIEP       P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPATISRPNKVSPWEIEPFVNSENVPKSVML 59

Query: 372 RLKRP 376
           + KRP
Sbjct: 60  KNKRP 64


>gi|297738985|emb|CBI28230.3| unnamed protein product [Vitis vinifera]
          Length = 184

 Score = 56.6 bits (135), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 677 LLHN----VGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKF 731
           +LHN     G    + P   +VKV   G  + R +D+SR  SY  L   L  MFG   K 
Sbjct: 85  VLHNGSARAGVGGGVNPNSKYVKVKMVGVGIARKIDLSRHHSYQTLTNTLINMFG---KC 141

Query: 732 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 771
           +   +S ++L + DRE D LL GD PW  F+ +V  +KIL
Sbjct: 142 QQDAQS-FKLAYQDREGDWLLAGDVPWRTFIQSVERLKIL 180


>gi|225432228|ref|XP_002275515.1| PREDICTED: auxin-responsive protein IAA31 [Vitis vinifera]
 gi|297736834|emb|CBI26035.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score = 56.6 bits (135), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 8/94 (8%)

Query: 685 DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQ--- 740
           +Q   T  FVKVY  G S+GR LD+  +S Y+ L   L  MF       DP   G     
Sbjct: 99  NQRQATNLFVKVYMEGISIGRKLDLFAYSGYDGLVATLSHMFKTTIFCSDPHVGGADHSG 158

Query: 741 ----LVFVDRENDVLLLGDDPWEAFVSNVWYIKI 770
               L + D+E D +++GD PWE F++ V  +KI
Sbjct: 159 KYHILTYEDKEGDWMMVGDVPWEMFLTTVKRLKI 192


>gi|356503831|ref|XP_003520706.1| PREDICTED: B3 domain-containing protein At2g36080-like [Glycine
           max]
          Length = 276

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIA--RDLHDVEWKFRHIFR 184
           F K LT SD        +P++ AEK FP LD S    A+ L+    D     W+FR+ + 
Sbjct: 56  FEKPLTPSDVGKLNRLVIPKQHAEKHFP-LDSSA---AKGLLLSFEDESGKCWRFRYSYW 111

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 244
              + ++LT GWS +V  KRL AGD VLF  +        I  + R P  +P+ V ++ S
Sbjct: 112 NSSQSYVLTKGWSRYVKDKRLHAGDVVLFHRHRSLPQRFFISCSRRQPNPVPAHVSTTRS 171


>gi|356522464|ref|XP_003529866.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Glycine
           max]
          Length = 421

 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D +   W+FR+ +   
Sbjct: 61  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRFRYSYWNS 119

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 120 SQSYVMTKGWSRFVKEKKLDAGDMVSF 146


>gi|296089028|emb|CBI38731.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 95  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYWNS 153

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 239
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    P+S+
Sbjct: 154 SQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRR--RPDAPDPTSL 208


>gi|194475604|gb|ACF74549.1| RAV [Nicotiana tabacum]
          Length = 385

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP L          L   DL+   W+FR+ +   
Sbjct: 198 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNTSKGVLLNFEDLNGKVWRFRYSYWNS 256

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPPTVMPS 237
            + ++LT GWS FV  K L AGD V F  +  E  QL +  +     PT+ P+
Sbjct: 257 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGEDKQLYIDFKARNATPTISPT 309


>gi|225445577|ref|XP_002285354.1| PREDICTED: auxin-responsive protein IAA29-like [Vitis vinifera]
          Length = 224

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 677 LLHN----VGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKF 731
           +LHN     G    + P   +VKV   G  + R +D+SR  SY  L   L  MFG   K 
Sbjct: 125 VLHNGSARAGVGGGVNPNSKYVKVKMVGVGIARKIDLSRHHSYQTLTNTLINMFG---KC 181

Query: 732 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 771
           +   +S ++L + DRE D LL GD PW  F+ +V  +KIL
Sbjct: 182 QQDAQS-FKLAYQDREGDWLLAGDVPWRTFIQSVERLKIL 220


>gi|242042451|ref|XP_002468620.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
 gi|241922474|gb|EER95618.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
          Length = 330

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 39  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 97

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPT 233
            + +++T GWS FV  KRL AGD+V F        + +L +  RR   PP 
Sbjct: 98  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGDAARGRLFIDWRRRPDPPV 148


>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
 gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
          Length = 274

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 117 GIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE--------LI 168
           G+   +  + F K +T SD        +P++ AE+ FP+LD S    A          L 
Sbjct: 20  GVAWVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGGGKGLVLS 79

Query: 169 ARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
             D     W+FR+ +    + +++T GWS FV  KRL AGD+VLF
Sbjct: 80  FEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLF 124


>gi|255579355|ref|XP_002530522.1| transcription factor, putative [Ricinus communis]
 gi|223529926|gb|EEF31854.1| transcription factor, putative [Ricinus communis]
          Length = 373

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 11/107 (10%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFP----SLDFSLQPPAQELIARDLHDVEWKFRHI 182
           F K LT SD        +P++ AEK FP    S+D  L    ++ + +      W+FR+ 
Sbjct: 137 FEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSVDKGLLLSFEDELGKC-----WRFRYS 191

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRR 227
           +    + ++LT GWS +V  K+L AGD VLF  +  +  +L +G RR
Sbjct: 192 YWNSSQSYVLTKGWSRYVKDKQLDAGDVVLFERHRLDGERLFIGWRR 238


>gi|255548087|ref|XP_002515100.1| hypothetical protein RCOM_1340820 [Ricinus communis]
 gi|223545580|gb|EEF47084.1| hypothetical protein RCOM_1340820 [Ricinus communis]
          Length = 450

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D +   W+FR+ +   
Sbjct: 125 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKLWRFRYSYWNS 183

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSS 238
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    P+S
Sbjct: 184 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKHRLYIDWRR--RPNAPDPTS 237


>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
 gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
 gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
           Japonica Group]
 gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
          Length = 311

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 16/128 (12%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 37  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYSYWNS 95

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRR------AIRPPT--- 233
            + +++T GWS FV  KRL AGD+V F        + +L +  RR      A++PPT   
Sbjct: 96  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDVVAALQPPTHRF 155

Query: 234 --VMPSSV 239
              +PSS+
Sbjct: 156 AHHLPSSI 163


>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
          Length = 308

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 16/128 (12%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 37  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYSYWNS 95

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRR------AIRPPT--- 233
            + +++T GWS FV  KRL AGD+V F        + +L +  RR      A++PPT   
Sbjct: 96  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDVVAALQPPTHRF 155

Query: 234 --VMPSSV 239
              +PSS+
Sbjct: 156 AHHLPSSI 163


>gi|18407193|ref|NP_566089.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
           thaliana]
 gi|75100798|sp|O82799.1|NGA1_ARATH RecName: Full=B3 domain-containing transcription factor NGA1;
           AltName: Full=Protein NGATHA 1
 gi|3522951|gb|AAC34233.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
           thaliana]
 gi|20197317|gb|AAM15018.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
           thaliana]
 gi|26451145|dbj|BAC42676.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
           thaliana]
 gi|30793817|gb|AAP40361.1| putative RAV B3 domain DNA binding protein [Arabidopsis thaliana]
 gi|330255671|gb|AEC10765.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
           thaliana]
          Length = 310

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 35  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 93

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 94  SQSYVMTKGWSRFVKDKKLDAGDIVSF 120


>gi|255555825|ref|XP_002518948.1| transcription factor, putative [Ricinus communis]
 gi|223541935|gb|EEF43481.1| transcription factor, putative [Ricinus communis]
          Length = 406

 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 5/120 (4%)

Query: 122 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 181
           Q  + F K +T SD        +P++ AEK FP LD S       L   D     W+FR+
Sbjct: 98  QKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLLLNFEDKTGKAWRFRY 156

Query: 182 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTVMPS 237
            +    + +++T GWS FV  K+L AGD V F        K++L +  RR    P   P+
Sbjct: 157 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGEAAKDRLYIDWRRRPDGPHHQPT 216


>gi|356504205|ref|XP_003520889.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Glycine max]
          Length = 420

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K  T SD        +P++ AEK FP LD S       L   D +   W+FR+ +   
Sbjct: 88  FEKVATPSDVGKLNRLVIPKQHAEKYFP-LDSSTNEKGLLLNFEDRNGKVWRFRYSYWNS 146

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 147 SQSYVMTKGWSRFVKEKKLDAGDIVSF 173


>gi|297789622|ref|XP_002862757.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308467|gb|EFH39015.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 312

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 37  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 95

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 96  SQSYVMTKGWSRFVKDKKLDAGDIVSF 122


>gi|227060666|gb|ACP18971.1| NGATHA1 [Arabidopsis thaliana]
          Length = 310

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 35  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 93

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 94  SQSYVMTKGWSRFVKDKKLDAGDIVSF 120


>gi|297824777|ref|XP_002880271.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326110|gb|EFH56530.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 311

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 36  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 94

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 95  SQSYVMTKGWSRFVKDKKLDAGDIVSF 121


>gi|238013004|gb|ACR37537.1| unknown [Zea mays]
          Length = 82

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 3/55 (5%)

Query: 731 FEDPLRSG---WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 782
           FE  L SG   WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 4   FEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSK 58


>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
          Length = 259

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           + F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ + 
Sbjct: 38  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTV 234
              + +++T GWS FV  KRL AGD+V F        +++L +  R    PP V
Sbjct: 97  NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCRPDPPVV 150


>gi|291197510|emb|CAZ68123.1| NGATHA1 [Arabidopsis halleri subsp. halleri]
          Length = 313

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 37  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 95

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 96  SQSYVMTKGWSRFVKDKKLDAGDIVSF 122


>gi|356560217|ref|XP_003548390.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Glycine max]
          Length = 420

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD S       L   D +   W+FR+ +   
Sbjct: 33  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRFRYSYWNS 91

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 92  SQSYVMTKGWSRFVKEKKLDAGDIVSF 118


>gi|365818565|gb|AEX00371.1| IAA36 [Solanum lycopersicum]
          Length = 242

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 6/95 (6%)

Query: 679 HNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRS 737
           HN+G  + +     +VKV   G ++GR +D+  ++SY  L   L QMF    +  D    
Sbjct: 135 HNIGIRNSM-----YVKVKMEGVAIGRKIDLMLYNSYQILTNTLLQMFNKSHESCDENDG 189

Query: 738 GWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILS 772
            + L++ D+E D +L GD PWE F+  V  I+ILS
Sbjct: 190 RFTLLYQDKEGDWMLAGDVPWETFMETVQRIQILS 224


>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 90  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRYSYWNS 148

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSV-------------LFIWNEKNQLLLGIRRAIRPPT 233
            + +++T GWS FV  KRL AGD+V             LFI  ++   L    R  R P 
Sbjct: 149 SQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADATRDRLFIDWKRRVELRDPHRLARLPM 208

Query: 234 VMPSS 238
            MP+S
Sbjct: 209 PMPTS 213


>gi|383932346|gb|AFH57270.1| RAV [Gossypium hirsutum]
          Length = 357

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 44/98 (44%)

Query: 116 LGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDV 175
           LG   K     F K +T SD        +P++ AEK FP    S       L   D+   
Sbjct: 182 LGFELKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKYFPLQSGSASSKGVLLNFEDVTGK 241

Query: 176 EWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            W+FR+ +    + ++L  GWS FV  K L AGD V F
Sbjct: 242 VWRFRYSYWNSSQSYVLIKGWSRFVKEKNLKAGDIVSF 279


>gi|284811255|gb|ADB96366.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 312 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 371
           Y GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WE EP  +    P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWETEPFVSSENIPKSVML 59

Query: 372 RLKRP 376
           + KRP
Sbjct: 60  KNKRP 64


>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
 gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
          Length = 420

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 100 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYWNS 158

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  KRL AGD+V F
Sbjct: 159 SQSYVMTKGWSRFVKEKRLDAGDTVSF 185


>gi|413917122|gb|AFW57054.1| hypothetical protein ZEAMMB73_040575 [Zea mays]
          Length = 296

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 20/150 (13%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE----WKFRHI 182
           F K LT SD        +PR+ AE  FP +  S      + I  +  D      W+FR  
Sbjct: 79  FSKVLTPSDVGKLNRLLIPRQCAEGFFPMI--SEVKSGGDDIFLNFEDTSTGLVWRFRFC 136

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN-----EKNQLLLGIR---------RA 228
                K ++LT GWSVF+  K L  GD + F  +       N L + I+           
Sbjct: 137 LWNNSKTYVLTKGWSVFIKEKNLKKGDILSFYRDASKSIRTNHLFIHIKPHTGTMPLPHH 196

Query: 229 IRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           +  P   PS ++  D +H  L    +H  A
Sbjct: 197 VPSPVFSPSGMVIDDQVHDSLNIGKSHGIA 226


>gi|115447949|ref|NP_001047754.1| Os02g0683500 [Oryza sativa Japonica Group]
 gi|75122233|sp|Q6EU30.1|Y2835_ORYSJ RecName: Full=B3 domain-containing protein Os02g0683500
 gi|50251902|dbj|BAD27840.1| RAV-like B3 domain DNA binding protein-like [Oryza sativa Japonica
           Group]
 gi|113537285|dbj|BAF09668.1| Os02g0683500 [Oryza sativa Japonica Group]
 gi|215766728|dbj|BAG98956.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 412

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 96  FDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRYSYWNS 154

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  KRL AGD+V F
Sbjct: 155 SQSYVMTKGWSRFVKEKRLDAGDTVSF 181


>gi|125540696|gb|EAY87091.1| hypothetical protein OsI_08488 [Oryza sativa Indica Group]
          Length = 411

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 95  FDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRYSYWNS 153

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  KRL AGD+V F
Sbjct: 154 SQSYVMTKGWSRFVKEKRLDAGDTVSF 180


>gi|297833940|ref|XP_002884852.1| hypothetical protein ARALYDRAFT_897360 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330692|gb|EFH61111.1| hypothetical protein ARALYDRAFT_897360 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 263

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFP------SLDFSLQPPAQELIARDLHDVEWKFR 180
           F K+LT SD        +P++ AEK FP        D +       L   D     WKFR
Sbjct: 29  FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNGGDDDVATTEKGMLLSFEDESGKCWKFR 88

Query: 181 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRR 227
           + +    + ++LT GWS +V  K L AGD V F  +  + ++L +G RR
Sbjct: 89  YSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 137


>gi|195607458|gb|ACG25559.1| IAA12 - auxin-responsive Aux/IAA family member [Zea mays]
          Length = 224

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 693 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
           FVKV   G+   R LD+  +  Y ELRE L  MF   G   +   S + + + D++ D++
Sbjct: 132 FVKVSMDGAPYLRKLDLRMYKGYRELREALEAMFVSSGSANNNNLSEFAVTYQDKDGDLM 191

Query: 752 LLGDDPWEAFVSNVWYIKILSPEDVQKMG 780
           L+GD P+E F S    ++I+   +   +G
Sbjct: 192 LVGDVPFEMFASTCRKLRIMKRSEATGLG 220


>gi|358347636|ref|XP_003637862.1| Maturase K [Medicago truncatula]
 gi|355503797|gb|AES85000.1| Maturase K [Medicago truncatula]
          Length = 624

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D +   W+FR+ +   
Sbjct: 172 FDKAVTPSDVGKLNRLVIPKQHAEKYFP-LDSTSNEKGLLLNFEDRNGKLWRFRYSYWNS 230

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  K+L AGD V F
Sbjct: 231 SQSYVMTKGWSRFVKEKKLDAGDIVSF 257


>gi|414867524|tpg|DAA46081.1| TPA: hypothetical protein ZEAMMB73_334184 [Zea mays]
          Length = 273

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 117 GIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE---------- 166
           G+   +  + F K +T SD        +P++ AE+ FP+LD S    +            
Sbjct: 20  GVAWLEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAASASASAGGGKAGL 79

Query: 167 -LIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            L   D     W+FR+ +    + +++T GWS FV  KRL AGD+VLF
Sbjct: 80  VLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLF 127


>gi|255566851|ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
 gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1, putative [Ricinus communis]
          Length = 371

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP    S       L   D+    W+FR+ +   
Sbjct: 204 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSNSTKGVLLNFEDITGKVWRFRYSYWNS 263

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 214
            + ++LT GWS FV  K L AGD V F+
Sbjct: 264 SQSYVLTKGWSRFVKEKNLKAGDIVRFL 291


>gi|356533499|ref|XP_003535301.1| PREDICTED: auxin-responsive protein IAA30-like [Glycine max]
          Length = 177

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMF------GIEGKFEDPLRSGWQLV 742
           T  FVKVY  G  +GR L++     Y+EL + L QMF      G E     P R    L 
Sbjct: 84  TSFFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQPERCH-VLT 142

Query: 743 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPE 774
           + D E D++++GD PWE F+S V  +KI   E
Sbjct: 143 YEDGEGDLIMVGDVPWEMFLSAVKRLKITRVE 174


>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
          Length = 293

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 87  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 145

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 214
            + +++T GWS FV  KRL AGD+V F 
Sbjct: 146 SQSYVMTKGWSRFVKEKRLDAGDTVSFC 173


>gi|297827087|ref|XP_002881426.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327265|gb|EFH57685.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 236

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIA--RDLHDVEWKFRHIFR 184
           F K LT SD        +P++ AE+ FP    +     + L+    D     W+FR+ + 
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRR 227
              + ++LT GWS +V  K L AGD VLF  +  N  +  +G RR
Sbjct: 98  NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRANGGRFFIGWRR 142


>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
          Length = 400

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 87  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 145

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  KRL AGD+V F
Sbjct: 146 SQSYVMTKGWSRFVKEKRLDAGDTVSF 172


>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
          Length = 400

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 87  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 145

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + +++T GWS FV  KRL AGD+V F
Sbjct: 146 SQSYVMTKGWSRFVKEKRLDAGDTVSF 172


>gi|297814780|ref|XP_002875273.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321111|gb|EFH51532.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE---WKFRHIF 183
           F KT+T SD        +P+  AEK FP L       + + I  +  DV    W+FR+ +
Sbjct: 180 FEKTVTPSDVGKLNRLVIPKHQAEKHFP-LPLGNNNVSVKGILLNFEDVNGKVWRFRYSY 238

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
               + ++LT GWS FV  KRL AGD + F
Sbjct: 239 WNSSQSYVLTKGWSRFVKEKRLCAGDLISF 268


>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
          Length = 287

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 87  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 145

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 214
            + +++T GWS FV  KRL AGD+V F 
Sbjct: 146 SQSYVMTKGWSRFVKEKRLDAGDTVSFC 173


>gi|356501831|ref|XP_003519727.1| PREDICTED: auxin-responsive protein IAA30-like [Glycine max]
          Length = 180

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 690 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMF------GIEGKFEDPLRSGWQLV 742
           T  FVKVY  G  +GR L++     Y+EL + L QMF      G E     P R    L 
Sbjct: 87  TSFFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQPDRCH-VLT 145

Query: 743 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPE 774
           + D E D++++GD PWE F+S V  +KI   E
Sbjct: 146 YEDGEGDLIMVGDVPWEMFLSAVKRLKITRVE 177


>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
 gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
 gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
          Length = 316

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 110 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 168

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 214
            + +++T GWS FV  KRL AGD+V F 
Sbjct: 169 SQSYVMTKGWSRFVKEKRLDAGDTVSFC 196


>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
           thaliana]
 gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
           AltName: Full=Protein NGATHA 4
 gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
           thaliana]
          Length = 333

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 19/112 (16%)

Query: 115 ELGIPSKQPTNYFC----------KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPA 164
           E+   S   TNYF           K LT SD        +P++ AE  FP  D       
Sbjct: 14  EIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLED------N 67

Query: 165 QELIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
           Q     D  D     W+FR+ +    + +++T GWS FV  K+L AGD+V F
Sbjct: 68  QNGTVLDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 119


>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
 gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
 gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
 gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
          Length = 328

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 19/112 (16%)

Query: 115 ELGIPSKQPTNYFC----------KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPA 164
           E+   S   TNYF           K LT SD        +P++ AE  FP  D       
Sbjct: 9   EIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLED------N 62

Query: 165 QELIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
           Q     D  D     W+FR+ +    + +++T GWS FV  K+L AGD+V F
Sbjct: 63  QNGTVLDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 114


>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 13/109 (11%)

Query: 115 ELGIPSKQPTNYFC----------KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPA 164
           ++G  S   TNYF           K LT SD        +P++ AE  FP          
Sbjct: 12  DIGASSSDNTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENYFP---LEGNQNG 68

Query: 165 QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
             L  +D +   W+FR+ +    + +++T GWS FV  K+L AGD+V F
Sbjct: 69  TVLDFQDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 117


>gi|115484261|ref|NP_001065792.1| Os11g0156000 [Oryza sativa Japonica Group]
 gi|75270015|sp|Q53QI0.1|Y1160_ORYSJ RecName: Full=B3 domain-containing protein Os11g0156000
 gi|62701645|gb|AAX92718.1| Similar to probable RAV2-like DNA binding protein [imported] -
           Arabidopsis thaliana [Oryza sativa Japonica Group]
 gi|108864011|gb|ABA91538.2| B3 DNA binding domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113644496|dbj|BAF27637.1| Os11g0156000 [Oryza sativa Japonica Group]
 gi|215697789|dbj|BAG91982.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 279

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K LT SD        +P++ AE+ FP            L   D     W+FR+ +   
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF-----IWNEKNQLLLGIRR 227
            + ++LT GWS +V  KRL AGD V F      +   ++L +G RR
Sbjct: 98  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143


>gi|449526628|ref|XP_004170315.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           RAV1-like, partial [Cucumis sativus]
          Length = 311

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KT+T SD        +P++ AEK FP  +  +      L   D+    W+FR+ +   
Sbjct: 162 FEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNS 221

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 214
            + ++LT GWS FV    L AGD V F+
Sbjct: 222 SQSYVLTKGWSRFVKDNTLRAGDVVRFL 249


>gi|449466693|ref|XP_004151060.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           RAV1-like [Cucumis sativus]
          Length = 317

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F KT+T SD        +P++ AEK FP  +  +      L   D+    W+FR+ +   
Sbjct: 168 FEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNS 227

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 214
            + ++LT GWS FV    L AGD V F+
Sbjct: 228 SQSYVLTKGWSRFVKDNTLRAGDVVRFL 255


>gi|356570873|ref|XP_003553608.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 299

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE----LIARDLHDVEWKFRHI 182
           F K LT SD        +P++ AEK FP LD S    A      L   D     W+FR+ 
Sbjct: 77  FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LDSSGGDSAAAKGLLLSFEDESGKCWRFRYS 135

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
           +    + ++LT GWS +V  KRL AGD VLF
Sbjct: 136 YWNSSQSYVLTKGWSRYVKDKRLHAGDVVLF 166


>gi|356515675|ref|XP_003526524.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA8-like
           [Glycine max]
          Length = 362

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 20/113 (17%)

Query: 693 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMF-----------GI-------EGKFED 733
           FVKV   G+   R +D+  +S+Y EL   L +MF           GI       E K +D
Sbjct: 244 FVKVSMDGAPYLRKVDLENYSTYPELSSALXKMFSCFTMSKCGSHGILGREMLNETKLKD 303

Query: 734 PLR-SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 785
            L  S + L + DRE D +L+GD PWE F+     ++I+   D   +  + VE
Sbjct: 304 LLHGSEYVLTYEDREGDWMLVGDVPWEMFIETCKRLRIMKSSDAIGLAPRAVE 356


>gi|224111734|ref|XP_002315958.1| AP2 domain-containing transcription factor [Populus trichocarpa]
 gi|222864998|gb|EEF02129.1| AP2 domain-containing transcription factor [Populus trichocarpa]
          Length = 367

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE---WKFRHIF 183
           F K +T SD        +P++ AEK FP    S       L+  +L DV    W+FR+ +
Sbjct: 206 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSNSTKGVLL--NLEDVSGKVWRFRYSY 263

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
               + ++LT GWS FV  K L AGD V F
Sbjct: 264 WNSSQSYVLTKGWSRFVKEKNLKAGDIVCF 293


>gi|62701644|gb|AAX92717.1| Similar to probable RAV2-like DNA binding protein [imported] -
           Arabidopsis thaliana [Oryza sativa Japonica Group]
 gi|62701878|gb|AAX92951.1| Similar to probable RAV2-like DNA binding protein [imported] -
           Arabidopsis thaliana [Oryza sativa Japonica Group]
          Length = 313

 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K LT SD        +P++ AE+ FP            L   D     W+FR+ +   
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF-----IWNEKNQLLLGIRR 227
            + ++LT GWS +V  KRL AGD V F      +   ++L +G RR
Sbjct: 98  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143


>gi|242081039|ref|XP_002445288.1| hypothetical protein SORBIDRAFT_07g007820 [Sorghum bicolor]
 gi|241941638|gb|EES14783.1| hypothetical protein SORBIDRAFT_07g007820 [Sorghum bicolor]
          Length = 270

 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 20/150 (13%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE----WKFRHI 182
           F K LT +D        +PR+ AE  FP +         + +  +  D      W+FR  
Sbjct: 64  FGKILTTTDVGKMNRVLIPRQCAEGCFPKISEGNSGGDDDFL--NFEDCSTGLIWRFRFC 121

Query: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSV--------------LFIWNEKNQLLLGIRRA 228
              + K++ LT GW V++  K L  GD +              +FI  + N   + +   
Sbjct: 122 LCNKSKKYFLTKGWHVYIKDKNLKKGDVLSFYRDASKTTSPNHMFIHIKPNTRTMSLPDH 181

Query: 229 IRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 258
           +  P   PSS++ +D  H  L    +H   
Sbjct: 182 VSSPIFSPSSLMINDQFHQSLGFGTSHGIV 211


>gi|15222622|ref|NP_173927.1| AP2/ERF and B3 domain-containing transcription factor TEM1
           [Arabidopsis thaliana]
 gi|75268206|sp|Q9C6M5.1|RAVL1_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription
           repressor TEM1; AltName: Full=Protein TEMPRANILLO 1;
           AltName: Full=RAV1-like ethylene-responsive
           transcription factor TEM1
 gi|12321505|gb|AAG50808.1|AC079281_10 DNA-binding protein RAV2, putative [Arabidopsis thaliana]
 gi|20259539|gb|AAM13889.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
 gi|21689705|gb|AAM67474.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
 gi|332192521|gb|AEE30642.1| AP2/ERF and B3 domain-containing transcription factor TEM1
           [Arabidopsis thaliana]
          Length = 361

 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFP----SLDFSLQPPAQELIARDLHDVE---WKF 179
           F KT+T SD        +P++ AEK FP    +    + P   + +  +L D     W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
           R+ +    + ++LT GWS FV  K L AGD V F
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288


>gi|225423895|ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Vitis vinifera]
          Length = 358

 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           +K     F KT+T SD        +P++ AEK FP L          L   D+    W+F
Sbjct: 184 TKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFP-LQTGTTSKGVLLNFEDMGGKVWRF 242

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
           R+ +    + ++LT GWS FV  K L AGD V F
Sbjct: 243 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSF 276


>gi|218185277|gb|EEC67704.1| hypothetical protein OsI_35175 [Oryza sativa Indica Group]
          Length = 363

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K LT SD        +P++ AE+ FP            L   D     W+FR+ +   
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF-----IWNEKNQLLLGIRR 227
            + ++LT GWS +V  KRL AGD V F      +   ++L +G RR
Sbjct: 98  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143


>gi|147782990|emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
          Length = 364

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 120 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 179
           +K     F KT+T SD        +P++ AEK FP L          L   D+    W+F
Sbjct: 184 TKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFP-LQTGTTSKGVLLNFEDMGGKVWRF 242

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
           R+ +    + ++LT GWS FV  K L AGD V F
Sbjct: 243 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSF 276


>gi|115445155|ref|NP_001046357.1| Os02g0228900 [Oryza sativa Japonica Group]
 gi|75258740|sp|Q6H543.1|IAA7_ORYSJ RecName: Full=Auxin-responsive protein IAA7; AltName:
           Full=Indoleacetic acid-induced protein 7
 gi|49388686|dbj|BAD25870.1| putative aux/IAA protein [Oryza sativa Japonica Group]
 gi|49388936|dbj|BAD26156.1| putative aux/IAA protein [Oryza sativa Japonica Group]
 gi|113535888|dbj|BAF08271.1| Os02g0228900 [Oryza sativa Japonica Group]
 gi|215768470|dbj|BAH00699.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222622470|gb|EEE56602.1| hypothetical protein OsJ_05967 [Oryza sativa Japonica Group]
          Length = 300

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 22/106 (20%)

Query: 693 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLRSG------------ 738
           F+K+   G  +GR +D++ F SY +L   + ++F G+     DPL +G            
Sbjct: 179 FIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAIS 238

Query: 739 --------WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
                   + LV+ D E D +L+GD PW  FVS+V  +++L   D+
Sbjct: 239 GLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDL 284


>gi|326533586|dbj|BAK05324.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 131

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 686 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 744
           +L P   +VKV K G+   R LD++ +  Y EL   LG++FG  G F       +QL   
Sbjct: 44  RLRPPSKYVKVMKRGAPYLRKLDLTEYRGYEELSAALGELFGPAGDFS----VTYQL--- 96

Query: 745 DRENDVLLLGDDPWEAFVSNVWYIKILSP 773
           D + D +L GD PW  FVS    + + SP
Sbjct: 97  DEDGDFMLAGDLPWGDFVSKCKKLTVSSP 125


>gi|297845604|ref|XP_002890683.1| hypothetical protein ARALYDRAFT_890147 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336525|gb|EFH66942.1| hypothetical protein ARALYDRAFT_890147 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFP----SLDFSLQPPAQELIARDLHDVE---WKF 179
           F KT+T SD        +P++ AEK FP    +    + P   + +  +L D     W+F
Sbjct: 192 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPATTTAMGMSPSPTKGVLINLEDRTGKVWRF 251

Query: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
           R+ +    + ++LT GWS FV  K L AGD V F
Sbjct: 252 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 285


>gi|18420964|ref|NP_568478.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
 gi|11131406|sp|Q9XFM0.1|IAA28_ARATH RecName: Full=Auxin-responsive protein IAA28; AltName:
           Full=Indoleacetic acid-induced protein 28
 gi|4929493|gb|AAD34019.1|AF149816_1 IAA28 [Arabidopsis thaliana]
 gi|23306354|gb|AAN17404.1| putative protein [Arabidopsis thaliana]
 gi|25084149|gb|AAN72186.1| putative protein [Arabidopsis thaliana]
 gi|49616373|gb|AAT67083.1| IAA28 [Arabidopsis thaliana]
 gi|110736579|dbj|BAF00255.1| IAA28 [Arabidopsis thaliana]
 gi|284794587|gb|ADB93666.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|284794589|gb|ADB93667.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|284794591|gb|ADB93668.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322548|gb|ADL70761.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322560|gb|ADL70767.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322566|gb|ADL70770.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322570|gb|ADL70772.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|332006115|gb|AED93498.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
          Length = 175

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 693 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
           +VK+   G  +GR +++S +++Y +L   + Q+F  +  ++  L   + LV+ D E D +
Sbjct: 82  YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWD--LNRQYTLVYEDTEGDKV 139

Query: 752 LLGDDPWEAFVSNVWYIKIL 771
           L+GD PWE FVS V  + +L
Sbjct: 140 LVGDVPWEMFVSTVKRLHVL 159


>gi|226499018|ref|NP_001149725.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
 gi|195629794|gb|ACG36538.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
          Length = 261

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 22/103 (21%)

Query: 685 DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLRSG---- 738
           +Q T    FVK+   G  +GR +D+S   SY+EL   + ++F G+    +DPL +G    
Sbjct: 154 EQTTKRAPFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLXAAQQDPLAAGAKEC 213

Query: 739 ----------------WQLVFVDRENDVLLLGDDPWEAFVSNV 765
                           + LV+ D E D +L+GD PW  FVS+V
Sbjct: 214 SQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSV 256


>gi|304322550|gb|ADL70762.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322562|gb|ADL70768.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322568|gb|ADL70771.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322572|gb|ADL70773.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
          Length = 174

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 693 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
           +VK+   G  +GR +++S +++Y +L   + Q+F  +  ++  L   + LV+ D E D +
Sbjct: 81  YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWD--LNRQYTLVYEDTEGDKV 138

Query: 752 LLGDDPWEAFVSNVWYIKIL 771
           L+GD PWE FVS V  + +L
Sbjct: 139 LVGDVPWEMFVSTVKRLHVL 158


>gi|21593532|gb|AAM65499.1| AP2 domain transcription factor [Arabidopsis thaliana]
          Length = 333

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPS--LDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           F KT+T SD        +P+  AEK FP    + ++      L   D++   W+FR+ + 
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
              + ++LT GWS FV  KRL AGD + F
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISF 271


>gi|21618252|gb|AAM67302.1| RAV-like protein [Arabidopsis thaliana]
          Length = 283

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE---WKFRHIF 183
           F K +T SD        +P++ AE+ FP LD S    + + +  +  D     W+FR+ +
Sbjct: 7   FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRYSY 65

Query: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPP 232
               + +++T GWS FV  K+L AGD V F  +   K++L +  RR  + P
Sbjct: 66  WNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRRPKIP 116


>gi|15230871|ref|NP_189201.1| AP2/ERF and B3 domain-containing transcription factor ARF14
           [Arabidopsis thaliana]
 gi|75273878|sp|Q9LS06.1|RAVL4_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription factor
           ARF14; AltName: Full=Protein AUXIN RESPONSE FACTOR 14;
           AltName: Full=RAV1-like ethylene-responsive
           transcription factor ARF14
 gi|7939559|dbj|BAA95760.1| RAV1 DNA-binding protein-like [Arabidopsis thaliana]
 gi|20152524|emb|CAD29641.1| putative auxin response factor 14 [Arabidopsis thaliana]
 gi|110738703|dbj|BAF01276.1| AP2 domain transcription factor [Arabidopsis thaliana]
 gi|332643541|gb|AEE77062.1| AP2/ERF and B3 domain-containing transcription factor ARF14
           [Arabidopsis thaliana]
          Length = 333

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPS--LDFSLQPPAQELIARDLHDVEWKFRHIFR 184
           F KT+T SD        +P+  AEK FP    + ++      L   D++   W+FR+ + 
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242

Query: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213
              + ++LT GWS FV  KRL AGD + F
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISF 271


>gi|304322556|gb|ADL70765.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
          Length = 164

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 693 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
           +VK+   G  +GR +++S +++Y +L   + Q+F  +  ++  L   + LV+ D E D +
Sbjct: 78  YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWD--LNRQYTLVYEDTEGDKV 135

Query: 752 LLGDDPWEAFVSNVWYIKIL 771
           L+GD PWE FVS V  + +L
Sbjct: 136 LVGDVPWEMFVSTVKRLHVL 155


>gi|284794585|gb|ADB93665.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|284794593|gb|ADB93669.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
          Length = 168

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 693 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 751
           +VK+   G  +GR +++S +++Y +L   + Q+F  +  ++  L   + LV+ D E D +
Sbjct: 82  YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWD--LNRQYTLVYEDTEGDKV 139

Query: 752 LLGDDPWEAFVSNVWYIKIL 771
           L+GD PWE FVS V  + +L
Sbjct: 140 LVGDVPWEMFVSTVKRLHVL 159


>gi|297844230|ref|XP_002889996.1| hypothetical protein ARALYDRAFT_888685 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335838|gb|EFH66255.1| hypothetical protein ARALYDRAFT_888685 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 344

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 43/87 (49%)

Query: 127 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 186
           F K +T SD        +P+  AEK FP    ++      L   D++   W+FR+ +   
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247

Query: 187 PKRHLLTTGWSVFVSAKRLVAGDSVLF 213
            + ++LT GWS FV  K L AGD V F
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSF 274


>gi|242064546|ref|XP_002453562.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
 gi|241933393|gb|EES06538.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
          Length = 292

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 22/114 (19%)

Query: 685 DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLRSG---- 738
           ++ T    FVK+   G  +GR +D++   SY+EL   + ++F G+    +DPL +     
Sbjct: 163 EETTKRAPFVKINMDGIPIGRKIDLNALGSYDELSLSVDKLFRGLLAAQQDPLDASTKEC 222

Query: 739 ----------------WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 776
                           + LV+ D E D +L+GD PW  FVS+V  +++L   D+
Sbjct: 223 SQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 276


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.131    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,233,556,770
Number of Sequences: 23463169
Number of extensions: 584805157
Number of successful extensions: 2150006
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3662
Number of HSP's successfully gapped in prelim test: 5193
Number of HSP's that attempted gapping in prelim test: 1832194
Number of HSP's gapped (non-prelim): 135186
length of query: 811
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 660
effective length of database: 8,816,256,848
effective search space: 5818729519680
effective search space used: 5818729519680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)