Query 003546
Match_columns 811
No_of_seqs 566 out of 4462
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 17:56:21 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003546.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1595-1599//hhsearch_pdb/003546hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tvc_A Methane monooxygenase c 1.0 1 1 184.9 12.8 177 598-801 8-206 (250)
2 4fk8_A Ferredoxin--NADP reduct 1.0 1 1 178.1 14.9 171 598-797 17-212 (271)
3 3jqq_A Ferredoxin NADP reducta 1.0 1 1 177.0 14.4 170 601-797 16-265 (316)
4 3lo8_A Ferredoxin--NADP reduct 1.0 1 1 176.5 17.0 172 600-797 28-251 (311)
5 3pm8_A PFCDPK2, calcium-depend 1.0 1 1 174.7 9.2 174 108-316 18-196 (197)
6 1qfj_A Protein (flavin reducta 1.0 1 1 173.9 17.6 171 601-799 3-189 (232)
7 3vo2_A Putative uncharacterize 1.0 1 1 173.9 16.2 171 601-797 34-249 (310)
8 1krh_A Benzoate 1,2-dioxygenas 1.0 1 1 173.4 16.2 169 599-796 107-293 (338)
9 4eh1_A Flavohemoprotein; struc 1.0 1 1 173.1 17.2 170 599-796 2-195 (243)
10 2eix_A NADH-cytochrome B5 redu 1.0 1 1 172.9 17.9 173 599-797 10-202 (243)
No 1
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=1.00 E-value=1 Score=184.87 Aligned_cols=177 Identities=18% Similarity=0.226 Sum_probs=135.9
Q ss_pred CCCCCEEEEEEEEECCCEEEEEEEC-C-C----CCCCCCCCEEEEEECCCCCCEEECCCCCCCCC-CCEEEEEEEEC--C
Q ss_conf 1631169999997469999999986-9-9----84348996899995469998020685558899-99199999972--9
Q 003546 598 SSIKAVSIQKVAVYPGNVLALHMSK-P-D----RFRYKSGQYMFVNCAAVSPFEWHPFSITSAPD-DDYLSVHIRTL--G 668 (811)
Q Consensus 598 ~~~~~~~i~~v~~~~~~v~~l~l~~-p-~----~~~~~pGQyv~l~~p~~s~~e~HPFSIasap~-~~~l~l~Ik~~--G 668 (811)
.....++|++++.+++++.++++.. | . .+.|+||||+.|.+|.. .++|||||++.|. ++.++++||.. |
T Consensus 8 ~~~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~~~~~l~i~vk~~~~G 85 (250)
T 1tvc_A 8 VGSFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPGT--DVSRSYSPANLPNPEGRLEFLIRVLPEG 85 (250)
T ss_dssp SSEEEEEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTSC--SSSEEECCBCCSSSSCCEEEEECCCTTS
T ss_pred CCEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCC--CCCCCCCCCCCCCCCCEEEEEEEECCCC
T ss_conf 42699999999986899699999945877766656838986799995898--6510541277998998699999988998
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHC
Q ss_conf 95176889852105999999866433358999998889997666899878889976999990767888999999999840
Q 003546 669 DWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNM 748 (811)
Q Consensus 669 ~~T~~L~~~~s~~~~~~~~G~~g~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVAgGiGITP~lsil~~l~~~~ 748 (811)
.+|+.|.+.+ ++ +++|.|.||||.+......++++||||||+||||++++++++..+.
T Consensus 86 ~~s~~l~~~l-------~~---------------Gd~v~v~gP~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~ 143 (250)
T 1tvc_A 86 RFSDYLRNDA-------RV---------------GQVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWT 143 (250)
T ss_dssp SSHHHHHHHS-------SS---------------SSEEEEEEEECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHHT
T ss_pred CCHHHHHHCC-------CC---------------CCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCC
T ss_conf 7358998418-------99---------------9999998586211627667965999972347879999999998639
Q ss_pred C-----------CCHHH-HHHHHHHHHHCCCCE-EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 4-----------53145-899998742029996-99997399999876567444479788888603
Q 003546 749 K-----------AIEEE-EENDLENGRDTGVNT-TIIIIDNNYEPFFFWTQKKGPIQDKKSILLLG 801 (811)
Q Consensus 749 ~-----------~~~~~-~~~~l~~~~~~~~~~-~i~v~~~~~~~~~~w~g~~G~i~~~~~~~l~~ 801 (811)
. +.++. +.+++.+......+. +++++++++++ |.|.+|++++.+.+.+..
T Consensus 144 ~~~~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~---~~g~~g~v~~~l~~~~~~ 206 (250)
T 1tvc_A 144 APNETRIYFGVNTEPELFYIDELKSLERSMRNLTVKACVWHPSGD---WEGEQGSPIDALREDLES 206 (250)
T ss_dssp CCSCEEEEEECSSSTTCCCHHHHHHHHHHSSSCEEEECCSSCSSC---CSSSSSSSSHHHHHHHHH
T ss_pred CCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC---CCCCCCEEHHHHHHHHHC
T ss_conf 996699999718889944599999999868984999995368877---688533305999865113
No 2
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=1.00 E-value=1 Score=178.13 Aligned_cols=171 Identities=17% Similarity=0.222 Sum_probs=130.4
Q ss_pred CCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEEEEEEC--CCCCHHHH
Q ss_conf 1631169999997469999999986998434899689999546999802068555889999199999972--99517688
Q 003546 598 SSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTL--GDWTRQLR 675 (811)
Q Consensus 598 ~~~~~~~i~~v~~~~~~v~~l~l~~p~~~~~~pGQyv~l~~p~~s~~e~HPFSIasap~~~~l~l~Ik~~--G~~T~~L~ 675 (811)
..++.++|.+++.+++++.++++..|..+.|+||||++|++|..+..++|||||+|.|.++.++++|+.. |.+|+.|.
T Consensus 17 ~~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~~~~~~~~v~~~~~G~~s~~l~ 96 (271)
T 4fk8_A 17 SKFDTATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNYEEHLEFFSIKVQNGPLTSRLQ 96 (271)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEECCCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTTSSSEEEEEECCTTCTTHHHHT
T ss_pred CCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHH
T ss_conf 13536899999985899799999769988859998799983679961344474267899986899999978985126886
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-CCCCCCCCCC-CCCCEEEEEEECCCHHHHHHHHHHHHHHC-----
Q ss_conf 9852105999999866433358999998889997-6668998788-89976999990767888999999999840-----
Q 003546 676 TVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLID-GPYGAPAQDY-KEYEVVLLVGLGIGATPMISIVKDIVNNM----- 748 (811)
Q Consensus 676 ~~~s~~~~~~~~G~~g~~~~~~~~~~~~~~v~Id-GPyG~~~~~~-~~~~~vvlVAgGiGITP~lsil~~l~~~~----- 748 (811)
+ + ++ ++++.+. ||||.+..+. ..+++++|||||+||||++|+++++..+.
T Consensus 97 ~-l-------~~---------------Gd~v~v~~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~~~v 153 (271)
T 4fk8_A 97 H-L-------KV---------------GDPVLIGKKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYERFDKV 153 (271)
T ss_dssp T-C-------CT---------------TCEEEEESCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHHCSEE
T ss_pred C-C-------CC---------------CCEEEEECCCCCCEECCCCCCCCEEEEEECCEEHHHHHHHHHHHHHCCCCCCE
T ss_conf 0-8-------99---------------89999941877633667767887099998778899999999988851779978
Q ss_pred ------CCCHHHHHHHHHH-HHHCCC--------CEEEE-EECCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf ------4531458999987-420299--------96999-9739999987656744447978888
Q 003546 749 ------KAIEEEEENDLEN-GRDTGV--------NTTII-IIDNNYEPFFFWTQKKGPIQDKKSI 797 (811)
Q Consensus 749 ------~~~~~~~~~~l~~-~~~~~~--------~~~i~-v~~~~~~~~~~w~g~~G~i~~~~~~ 797 (811)
++.++..+.+.++ ...... +..++ +++++.. +.+|++++...+
T Consensus 154 ~l~~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~s~~~~------~~~G~v~~~~~~ 212 (271)
T 4fk8_A 154 VLTHTCRLKGELAYMDYIKHDLPGHEYLGDVIREKLVYYPTVTREEF------ENEGRITDLIAS 212 (271)
T ss_dssp EEEECCCSHHHHHHHHHHHTCCTTCTTHHHHHHHHEEEEECC-------------CCHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCC------CCCCCCCHHHHC
T ss_conf 99996698899768999999997584421135540899998568865------666324867865
No 3
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=1.00 E-value=1 Score=177.03 Aligned_cols=170 Identities=16% Similarity=0.126 Sum_probs=129.7
Q ss_pred CCEEEEEEEEEC-----CCEEEEEEECCCCCCCCCCCEEEEEECCCC---------------------------------
Q ss_conf 116999999746-----999999998699843489968999954699---------------------------------
Q 003546 601 KAVSIQKVAVYP-----GNVLALHMSKPDRFRYKSGQYMFVNCAAVS--------------------------------- 642 (811)
Q Consensus 601 ~~~~i~~v~~~~-----~~v~~l~l~~p~~~~~~pGQyv~l~~p~~s--------------------------------- 642 (811)
+.++|++++.+. ++|..|++..+..|+|+||||+.|.+|+.+
T Consensus 16 ~~~~v~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~GQ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 95 (316)
T 3jqq_A 16 LKCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELDNNPNNQINKDHNIINTTNHTNHNNIALSHIK 95 (316)
T ss_dssp EEEEEEEEEECSCTTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC----------------------------------
T ss_pred EEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 79999713773479999856899995899765445868578899865010113443222222223222222211234579
Q ss_pred -CCEEECCCCCCCCCCCEEEEEEEEC--------------CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf -9802068555889999199999972--------------9951768898521059999998664333589999988899
Q 003546 643 -PFEWHPFSITSAPDDDYLSVHIRTL--------------GDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVL 707 (811)
Q Consensus 643 -~~e~HPFSIasap~~~~l~l~Ik~~--------------G~~T~~L~~~~s~~~~~~~~G~~g~~~~~~~~~~~~~~v~ 707 (811)
..++|||||+|+|.++.++|+||.. |.+|..|.. + ++ +++|.
T Consensus 96 g~~~~R~ySIaS~p~~~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~-l-------~~---------------Gd~v~ 152 (316)
T 3jqq_A 96 KQRCARLYSISSSNNMENLSVAIKIHKYEQTENAPNITNYGYCSGFIKN-L-------KI---------------NDDIY 152 (316)
T ss_dssp -CCCCEEEEBCSCTTSSSEEEEEECCBC---------CCBCHHHHHHHT-C-------CT---------------TCEEE
T ss_pred CCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHH-C-------CC---------------CCEEE
T ss_conf 9643145432668999858999999871256666675889845578861-8-------99---------------79899
Q ss_pred EECCCCCCCCCCC---CCCEEEEEEECCCHHHHHHHHHHHHHHC---------------------CCCHHH-HHHHHHHH
Q ss_conf 9766689987888---9976999990767888999999999840---------------------453145-89999874
Q 003546 708 IDGPYGAPAQDYK---EYEVVLLVGLGIGATPMISIVKDIVNNM---------------------KAIEEE-EENDLENG 762 (811)
Q Consensus 708 IdGPyG~~~~~~~---~~~~vvlVAgGiGITP~lsil~~l~~~~---------------------~~~~~~-~~~~l~~~ 762 (811)
|+||||.+..+.. ..+++|||||||||||++|+++++.... ++.++. +.+++.+.
T Consensus 153 v~gP~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l 232 (316)
T 3jqq_A 153 LTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYF 232 (316)
T ss_dssp EEEEECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGCTTHHHHHHH
T ss_pred EEECCCCEECCCCCCCCCCCEEEEECCCEECHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHCHHHHHHH
T ss_conf 99357713758756677886899967954036899999999731133322345788868999984587882159999999
Q ss_pred HHCCC-CE-EEEEECCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 20299-96-9999739999987656744447978888
Q 003546 763 RDTGV-NT-TIIIIDNNYEPFFFWTQKKGPIQDKKSI 797 (811)
Q Consensus 763 ~~~~~-~~-~i~v~~~~~~~~~~w~g~~G~i~~~~~~ 797 (811)
..... +. ++++.+++ +. |.|.+|+|++.+.+
T Consensus 233 ~~~~~~~~~~~~~~s~~-~~---~~g~~g~V~~~l~~ 265 (316)
T 3jqq_A 233 QKMYPNNINIHYVFSYK-QN---SDATSFYVQDEIYK 265 (316)
T ss_dssp HHHCTTTEEEEEEEGGG-CC------CBCCHHHHHHH
T ss_pred HHHCCCCEEEEEEECCC-CC---CCCCCCCHHHHHHH
T ss_conf 97488968999998777-56---67874331279998
No 4
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=1.00 E-value=1 Score=176.47 Aligned_cols=172 Identities=15% Similarity=0.105 Sum_probs=132.6
Q ss_pred CCCEEEEEEEEEC-----CCEEEEEEECCCCCCCCCCCEEEEEECCCC------CCEEECCCCCCCCCC-----CEEEEE
Q ss_conf 3116999999746-----999999998699843489968999954699------980206855588999-----919999
Q 003546 600 IKAVSIQKVAVYP-----GNVLALHMSKPDRFRYKSGQYMFVNCAAVS------PFEWHPFSITSAPDD-----DYLSVH 663 (811)
Q Consensus 600 ~~~~~i~~v~~~~-----~~v~~l~l~~p~~~~~~pGQyv~l~~p~~s------~~e~HPFSIasap~~-----~~l~l~ 663 (811)
.+.++|++++.++ ++++++++..|..+.|+||||++|++|..+ ..++|||||+|+|.+ +.++|+
T Consensus 28 ~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~ 107 (311)
T 3lo8_A 28 PFTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLC 107 (311)
T ss_dssp CEEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEE
T ss_pred CEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEE
T ss_conf 71789996374368778786189998079987644898889968887645579888855567457876657899889999
Q ss_pred EEEC---------------CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC--CCCCEEE
Q ss_conf 9972---------------9951768898521059999998664333589999988899976668998788--8997699
Q 003546 664 IRTL---------------GDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDY--KEYEVVL 726 (811)
Q Consensus 664 Ik~~---------------G~~T~~L~~~~s~~~~~~~~G~~g~~~~~~~~~~~~~~v~IdGPyG~~~~~~--~~~~~vv 726 (811)
||.. |.+|+.|.+ + ++ +++|.|.||||.+.... ..++++|
T Consensus 108 Vk~~~~~~~~~~~~~~~~~G~~S~~L~~-l-------~~---------------Gd~v~v~gP~G~~~~~~~~~~~~~~v 164 (311)
T 3lo8_A 108 VRRAVYYDPETGKEDPSKNGVCSNFLCN-S-------KP---------------GDKIQLTGPSGKIMLLPEEDPNATHI 164 (311)
T ss_dssp EECCCCCCTTTCCCCGGGSCHHHHHHHT-C-------CT---------------TCEEEEEEEECCTTCCCCSCTTCEEE
T ss_pred EEEEEECCCCCCCCCCCCCCCHHHHHHC-C-------CC---------------CCEEEEEECCCCCCCCCCCCCCCCEE
T ss_conf 9997752456676776889704458863-9-------99---------------49899983468841288768999889
Q ss_pred EEEECCCHHHHHHHHHHHHHHCC----------------CCHHH-HHHHHHHHHHCCC-C-EEEEEECCCCCCCCCCCCC
Q ss_conf 99907678889999999998404----------------53145-8999987420299-9-6999973999998765674
Q 003546 727 LVGLGIGATPMISIVKDIVNNMK----------------AIEEE-EENDLENGRDTGV-N-TTIIIIDNNYEPFFFWTQK 787 (811)
Q Consensus 727 lVAgGiGITP~lsil~~l~~~~~----------------~~~~~-~~~~l~~~~~~~~-~-~~i~v~~~~~~~~~~w~g~ 787 (811)
|||||+||||++|++++++.+.. +.++. +.+++.+...... + .++++.+.+.+. |.|.
T Consensus 165 lIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~~~~~~~~~~~~~~s~~~~~---~~g~ 241 (311)
T 3lo8_A 165 MIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYPDNFRYDKALSREQKN---RSGG 241 (311)
T ss_dssp EEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGGGCSSHHHHHHHHHHCTTTEEEEEEETTTC---------
T ss_pred EEECCEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC---CCCC
T ss_conf 9988878999999999999733665567787899996477477569999999998298868999998988766---6788
Q ss_pred CCCCCHHHHH
Q ss_conf 4447978888
Q 003546 788 KGPIQDKKSI 797 (811)
Q Consensus 788 ~G~i~~~~~~ 797 (811)
+|++++.+.+
T Consensus 242 ~~~v~~~l~~ 251 (311)
T 3lo8_A 242 KMYVQDKIEE 251 (311)
T ss_dssp -CCHHHHHHH
T ss_pred CCEEHHHHHH
T ss_conf 5221689998
No 5
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=1.00 E-value=1 Score=174.67 Aligned_cols=174 Identities=16% Similarity=0.191 Sum_probs=144.6
Q ss_pred CCCCCCCHHHHHHHHHH--HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 88863200125567523--9998752025899998743458145888884201320048961589999999967558997
Q 003546 108 FGSSVARTASARIRQVS--QELKRLASFAKKPQPPARFDRNKSAAAYALKGLKFISKTDGGAGWANVEKRFDEITASTNG 185 (811)
Q Consensus 108 ~~~~~~~~~~~~~~~~s--~~lk~~~~~~~~~~~~~~~dr~~s~a~~alk~l~~i~~~~~~~~~~~l~~~F~~lD~d~dG 185 (811)
...|++..+..++++++ +++|+.+ ++.++.....++.+++++.|+.+|.|++|
T Consensus 18 ~~~~l~~~~~~~l~~f~~~~~lk~~~-------------------------l~~i~~~l~~~e~~~l~~~F~~~D~d~~G 72 (197)
T 3pm8_A 18 GHVELSSTLLKNLKNFKKENELKKIA-------------------------LTIIAKHLCDVEINNLRNIFIALDVDNSG 72 (197)
T ss_dssp CSCCCCTTHHHHHHHTTTSCHHHHHH-------------------------HHHHHHHCCHHHHHHHHHHHHHHCTTCSS
T ss_pred CCCCCCHHHHHHHHHHHHCCHHHHHH-------------------------HHHHHHHCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 78878999999999998711999999-------------------------99999979999999999999997799999
Q ss_pred CEEHHHHCCCC---CCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEH
Q ss_conf 23152104401---699897899999999997117999993509999999999504796999999824616899981519
Q 003546 186 VLPRARFGECI---GMNKDSKDFAVELFDALTRRRNIQGDTITKDQLREFWDQISDQSFDSRLQTFFDMVDKDADGRITE 262 (811)
Q Consensus 186 ~I~~~ef~~~l---g~~~~~~~~~~~lF~~l~d~d~~~~G~It~~EF~~~~~~l~~~~~~e~L~~~F~~fDkD~dG~It~ 262 (811)
.|+.+||..++ +... ++..+..+|+. .|.++ +|.|+|+||+.++........+++++.+|+.||+|++|+|+.
T Consensus 73 ~Is~~El~~~l~~~g~~~-~~~~~~~l~~~-~D~d~--~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~ 148 (197)
T 3pm8_A 73 TLSSQEILDGLKKIGYQK-IPPDIHQVLRD-IDSNA--SGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISV 148 (197)
T ss_dssp EECHHHHHHHHHHHC-----CHHHHHHHHC----------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCHHHHHHHHHHHCCCC-CHHHHHHHHHH-HCCCC--CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 597999999999818988-99999999998-48899--981849999999998875224999999999878998798989
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 999999995110487742278799999999987299999842099999999829
Q 003546 263 DEVREIISLSASANKLSNIQKQAEEYAALIMEELDPDHLGCIMIDNLEMLLLQA 316 (811)
Q Consensus 263 eEl~~il~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~I~~eEF~~ll~~~ 316 (811)
+||++++....... ...++.++.+|+++|.|+||.|+|+||..+|++.
T Consensus 149 ~El~~~l~~~~~~~------~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 196 (197)
T 3pm8_A 149 EELKRIFGRDDIEN------PLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196 (197)
T ss_dssp HHHHHHHC----CC------HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred HHHHHHHHHCCCCC------CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
T ss_conf 99999998516678------9999999999999769999928099999998758
No 6
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=1.00 E-value=1 Score=173.94 Aligned_cols=171 Identities=16% Similarity=0.270 Sum_probs=133.1
Q ss_pred CCEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCC-CEEEEEEEECC--CCCHHHHHH
Q ss_conf 116999999746999999998699843489968999954699980206855588999-91999999729--951768898
Q 003546 601 KAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDD-DYLSVHIRTLG--DWTRQLRTV 677 (811)
Q Consensus 601 ~~~~i~~v~~~~~~v~~l~l~~p~~~~~~pGQyv~l~~p~~s~~e~HPFSIasap~~-~~l~l~Ik~~G--~~T~~L~~~ 677 (811)
+.++|.+++.+++++.++++..|..+.|+||||+.|.+|. .++|||||+|.|.+ +.++++||..+ ++|..+...
T Consensus 3 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~---~~~R~ySi~s~~~~~~~l~l~i~~~~~G~~s~~~~~~ 79 (232)
T 1qfj_A 3 LSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDE---RDKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDR 79 (232)
T ss_dssp EEEEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSS---SCEEEEECCSCTTSTTCEEEEEC------CCHHHHHH
T ss_pred EEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCC---CCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHH
T ss_conf 6899999995489879999920997872999879998799---9532223377999999389999981698404999986
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHC---------
Q ss_conf 52105999999866433358999998889997666899878889976999990767888999999999840---------
Q 003546 678 FSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNM--------- 748 (811)
Q Consensus 678 ~s~~~~~~~~G~~g~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVAgGiGITP~lsil~~l~~~~--------- 748 (811)
+.. ++++.|.||||.+......+++++|||||+||||++++++++..+.
T Consensus 80 l~~----------------------Gd~v~v~gP~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~~~v~l~~ 137 (232)
T 1qfj_A 80 ILK----------------------DHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARNPNRDITIYW 137 (232)
T ss_dssp HHH----------------------HSEEEEEEEECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred CCC----------------------CCEEEEECCCCCEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 799----------------------9989995773433867888883899970506869999999999639999689999
Q ss_pred --CCCHHH-HHHHHHHHHHCCCCE-EEEEECCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf --453145-899998742029996-999973999998765674444797888886
Q 003546 749 --KAIEEE-EENDLENGRDTGVNT-TIIIIDNNYEPFFFWTQKKGPIQDKKSILL 799 (811)
Q Consensus 749 --~~~~~~-~~~~l~~~~~~~~~~-~i~v~~~~~~~~~~w~g~~G~i~~~~~~~l 799 (811)
++.++. +.+++.+......+. ++++.+.+.++ |.|.+|++++...+.+
T Consensus 138 ~~r~~~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~---~~g~~g~v~~~~~~~~ 189 (232)
T 1qfj_A 138 GGREEQHLYDLCELEALSLKHPGLQVVPVVEQPEAG---WRGRTGTVLTAVLQDH 189 (232)
T ss_dssp EESSGGGCTTHHHHHHHHHHCTTEEEEEEESSCCTT---CCSEESCHHHHHHHHC
T ss_pred EECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC---CCCCEEEHHHHHHHHC
T ss_conf 618889966289999999878991999997379988---6786614889999764
No 7
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=1.00 E-value=1 Score=173.88 Aligned_cols=171 Identities=17% Similarity=0.199 Sum_probs=130.4
Q ss_pred CCEEEEEEEEECCC-----EEEEEEECCCCCCCCCCCEEEEEECCCC----CCEEECCCCCCCCC-----CCEEEEEEEE
Q ss_conf 11699999974699-----9999998699843489968999954699----98020685558899-----9919999997
Q 003546 601 KAVSIQKVAVYPGN-----VLALHMSKPDRFRYKSGQYMFVNCAAVS----PFEWHPFSITSAPD-----DDYLSVHIRT 666 (811)
Q Consensus 601 ~~~~i~~v~~~~~~-----v~~l~l~~p~~~~~~pGQyv~l~~p~~s----~~e~HPFSIasap~-----~~~l~l~Ik~ 666 (811)
+.++|++++.++++ +.++++..+..+.|+||||++|.+|... +.++|||||+|+|. ++.++|+||.
T Consensus 34 ~~~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~ 113 (310)
T 3vo2_A 34 YVGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKR 113 (310)
T ss_dssp EEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEEC
T ss_pred EEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEE
T ss_conf 89999978981588997628999995799876668878999798758899737643103587875647899989999999
Q ss_pred C-----------CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC-CCCCCCEEEEEEECCCH
Q ss_conf 2-----------99517688985210599999986643335899999888999766689987-88899769999907678
Q 003546 667 L-----------GDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQ-DYKEYEVVLLVGLGIGA 734 (811)
Q Consensus 667 ~-----------G~~T~~L~~~~s~~~~~~~~G~~g~~~~~~~~~~~~~~v~IdGPyG~~~~-~~~~~~~vvlVAgGiGI 734 (811)
. |.+|+.|.+ + ++ +++|.|.||||.+.. +....+++||||||+||
T Consensus 114 ~~~~~~~~~~~~G~~S~~L~~-l-------~~---------------Gd~v~v~gP~G~~~~~~~~~~~~~vlIagGtGI 170 (310)
T 3vo2_A 114 LVYTNDQGEIVKGVCSNFLCD-L-------KP---------------GADVKITGPVGKEMLMPKDPNATVIMLATGTGI 170 (310)
T ss_dssp CEEECTTSCEEECHHHHHHHT-C-------CT---------------TCEEEEEEEECSTTCCBSCTTCEEEEEEEGGGG
T ss_pred EEECCCCCCCCCCCHHHHHHC-C-------CC---------------CCEEEEEECCCCCCCCCCCCCCCEEEEECCCCH
T ss_conf 874368887578500457861-8-------99---------------798999933587422787889878999589415
Q ss_pred HHHHHHHHHHHHHCC----------------CCHHH-HHHHHHHHHHCCC-CE-EEEEECCCCCCCCCCCCCCCCCCHHH
Q ss_conf 889999999998404----------------53145-8999987420299-96-99997399999876567444479788
Q 003546 735 TPMISIVKDIVNNMK----------------AIEEE-EENDLENGRDTGV-NT-TIIIIDNNYEPFFFWTQKKGPIQDKK 795 (811)
Q Consensus 735 TP~lsil~~l~~~~~----------------~~~~~-~~~~l~~~~~~~~-~~-~i~v~~~~~~~~~~w~g~~G~i~~~~ 795 (811)
||++|++++++.+.. +.++. +.+++.+.....+ +. ++++.+++.+. |.|.+|++++.+
T Consensus 171 aP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~d~~~~~el~~l~~~~~~~~~v~~~~sr~~~~---~~g~~~~v~~~l 247 (310)
T 3vo2_A 171 APFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPDNFRLDFAVSREQTN---AAGEKMYIQTRM 247 (310)
T ss_dssp HHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSGGGCCSHHHHHHHHHHCTTTEEEEEEETTTCBC---TTCCBCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCC---CCCCCEEHHHHH
T ss_conf 68999999999852554567786899998067464513999999998499978999998878877---788603448899
Q ss_pred HH
Q ss_conf 88
Q 003546 796 SI 797 (811)
Q Consensus 796 ~~ 797 (811)
.+
T Consensus 248 ~~ 249 (310)
T 3vo2_A 248 AE 249 (310)
T ss_dssp HT
T ss_pred HH
T ss_conf 99
No 8
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=1.00 E-value=1 Score=173.36 Aligned_cols=169 Identities=15% Similarity=0.209 Sum_probs=129.6
Q ss_pred CCCCEEEEEEEEECCCEEEEEEECCC---CCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEEEEEEC--CCCCHH
Q ss_conf 63116999999746999999998699---8434899689999546999802068555889999199999972--995176
Q 003546 599 SIKAVSIQKVAVYPGNVLALHMSKPD---RFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTL--GDWTRQ 673 (811)
Q Consensus 599 ~~~~~~i~~v~~~~~~v~~l~l~~p~---~~~~~pGQyv~l~~p~~s~~e~HPFSIasap~~~~l~l~Ik~~--G~~T~~ 673 (811)
..+.++|.+++.+++++.++++..|. .+.|+||||+.|.+|.. .++|||||++.|.++.++|+||.. |.+|+.
T Consensus 107 ~~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~~~~l~~~vk~~~~G~~S~~ 184 (338)
T 1krh_A 107 HHFEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGT--TETRSYSFSSQPGNRLTGFVVRNVPQGKMSEY 184 (338)
T ss_dssp EEEEEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEECTTS--SCEEEEECCSCTTCSEEEEEEECCTTCHHHHH
T ss_pred EEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCC--CCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
T ss_conf 3898999999975898799999938987777739998699984998--86400052679999969999998589875146
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCC----
Q ss_conf 8898521059999998664333589999988899976668998788899769999907678889999999998404----
Q 003546 674 LRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMK---- 749 (811)
Q Consensus 674 L~~~~s~~~~~~~~G~~g~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVAgGiGITP~lsil~~l~~~~~---- 749 (811)
|.+.+ ++ ++.+.|.||||.+..+.. .+++||||||+||||++|+++++..+..
T Consensus 185 L~~~l-------~~---------------Gd~v~v~gP~G~f~~~~~-~~~~vliagGtGiaP~~s~l~~l~~~~~~~~v 241 (338)
T 1krh_A 185 LSVQA-------KA---------------GDKMSFTGPFGSFYLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQKGSEHPV 241 (338)
T ss_dssp HHTTC-------CT---------------TCEEEEEEEECSCSCCCC-SSCEEEEEEGGGHHHHHHHHHHHHHHCCSSCE
T ss_pred HHHCC-------CC---------------CCEEEEECCCCCEEECCC-CCEEEEEECCCCHHHHHHHHHHHHHCCCCCEE
T ss_conf 76356-------89---------------999999777343185789-96189997231475899999999971999729
Q ss_pred -------CCHHHH-HHHHHHHHHCCCCE-EEEEECCCCCCCCCCCCCCCCCCHHHH
Q ss_conf -------531458-99998742029996-999973999998765674444797888
Q 003546 750 -------AIEEEE-ENDLENGRDTGVNT-TIIIIDNNYEPFFFWTQKKGPIQDKKS 796 (811)
Q Consensus 750 -------~~~~~~-~~~l~~~~~~~~~~-~i~v~~~~~~~~~~w~g~~G~i~~~~~ 796 (811)
+.++.. .+++.+......+. ++++++.+++. |. .+|++++.+.
T Consensus 242 ~l~~~~r~~~d~~~~~el~~l~~~~~~~~~~~~~s~~~~~---~~-~~g~v~~~l~ 293 (338)
T 1krh_A 242 RLVFGVTQDCDLVALEQLDALQQKLPWFEYRTVVAHAESQ---HE-RKGYVTGHIE 293 (338)
T ss_dssp EEEEEESSGGGCCCHHHHHHHHHHCTTEEEEEEETTCCSS---SS-EESCSGGGCC
T ss_pred EEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC---CC-CCCCCCHHHH
T ss_conf 9999958989951299999999868992999999668888---78-4674078998
No 9
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=1.00 E-value=1 Score=173.13 Aligned_cols=170 Identities=16% Similarity=0.206 Sum_probs=130.3
Q ss_pred CCCCEEEEEEEEECCCEEEEEEECCCC---CCCCCCCEEEEEECCCCC--CEEECCCCCCCCCCCEEEEEEEEC------
Q ss_conf 631169999997469999999986998---434899689999546999--802068555889999199999972------
Q 003546 599 SIKAVSIQKVAVYPGNVLALHMSKPDR---FRYKSGQYMFVNCAAVSP--FEWHPFSITSAPDDDYLSVHIRTL------ 667 (811)
Q Consensus 599 ~~~~~~i~~v~~~~~~v~~l~l~~p~~---~~~~pGQyv~l~~p~~s~--~e~HPFSIasap~~~~l~l~Ik~~------ 667 (811)
.++.++|.+++.+++++.++++..|.. +.|+||||++|.+|..+. .++|||||+|.|+++.++++||..
T Consensus 2 ~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~~~~~~i~vk~~~~~~~~ 81 (243)
T 4eh1_A 2 DGRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASNGREYRISVKREGVGSDN 81 (243)
T ss_dssp CCEEEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEEEECCSSCSSCEEEEEEBCSCCCSSCEEEEEECTTTTSSS
T ss_pred CCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCC
T ss_conf 86788999999759982999999389875788699987999986699864332334845589998499999996068799
Q ss_pred -CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
Q ss_conf -9951768898521059999998664333589999988899976668998788899769999907678889999999998
Q 003546 668 -GDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVN 746 (811)
Q Consensus 668 -G~~T~~L~~~~s~~~~~~~~G~~g~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVAgGiGITP~lsil~~l~~ 746 (811)
|.+|+.|.+.+ ++ +++|.|.||||.+..+ ..+++++|||||+||||++++++++..
T Consensus 82 ~G~~S~~l~~~l-------~~---------------G~~v~v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~ 138 (243)
T 4eh1_A 82 PGLVSHYLHNNV-------KV---------------GDSVKLYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAK 138 (243)
T ss_dssp CCHHHHHHHHHC-------CT---------------TCEEEEEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHH
T ss_pred CCEEHHHHHHCC-------CC---------------CCEEEEECCCCCCCCC-CCCCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 976655787338-------99---------------9999997267655768-999878999754508999999999997
Q ss_pred HCC----------CCHHH-HHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 404----------53145-89999874202999-6999973999998765674444797888
Q 003546 747 NMK----------AIEEE-EENDLENGRDTGVN-TTIIIIDNNYEPFFFWTQKKGPIQDKKS 796 (811)
Q Consensus 747 ~~~----------~~~~~-~~~~l~~~~~~~~~-~~i~v~~~~~~~~~~w~g~~G~i~~~~~ 796 (811)
+.. +.++. +.+++.+..... + .++.+.+++.++ |. ..|++++...
T Consensus 139 ~~~~~v~l~~~~r~~~~~~~~~el~~l~~~~-~~~~~~~~s~~~~~---~~-~~g~~~~~~~ 195 (243)
T 4eh1_A 139 QNKSGVTYLYACNSAKEHTFAQETAQLIAQQ-GWMQQVWYRDESAD---DV-LQGEMQLAEL 195 (243)
T ss_dssp TTCCSEEEEEEESSGGGCTTHHHHHHHHHHH-TCEEEEEESSCCCT---TC-EESSCCCTTS
T ss_pred CCCCEEEEEEEECCHHHHHHHHHHHHHHHHC-CEEEEEEECCCCCC---CC-CCCCCCHHHE
T ss_conf 4898099999807754656899999999757-90899998668876---64-4687448995
No 10
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=1.00 E-value=1 Score=172.89 Aligned_cols=173 Identities=17% Similarity=0.258 Sum_probs=131.8
Q ss_pred CCCCEEEEEEEEECCCEEEEEEECCC---CCCCCCCCEEEEEECCCCCCEEECCCCCCCCC-CCEEEEEEEEC--CCCCH
Q ss_conf 63116999999746999999998699---84348996899995469998020685558899-99199999972--99517
Q 003546 599 SIKAVSIQKVAVYPGNVLALHMSKPD---RFRYKSGQYMFVNCAAVSPFEWHPFSITSAPD-DDYLSVHIRTL--GDWTR 672 (811)
Q Consensus 599 ~~~~~~i~~v~~~~~~v~~l~l~~p~---~~~~~pGQyv~l~~p~~s~~e~HPFSIasap~-~~~l~l~Ik~~--G~~T~ 672 (811)
.+..++|++++.+++++..+++..+. .+.|+||||+.|.+|..+...+||||++|.|. ++.++++||.. |.+|+
T Consensus 10 ~~~~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~~~~~~~l~vk~~~~G~~S~ 89 (243)
T 2eix_A 10 EYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPVSSDDEKGYFDLIIKVYEKGQMSQ 89 (243)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTTCCSEEEEEEECCTTCHHHH
T ss_pred CEEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCH
T ss_conf 15999999999958990999999199986367688407999975389778752244687778988999999858997415
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHC----
Q ss_conf 6889852105999999866433358999998889997666899878889976999990767888999999999840----
Q 003546 673 QLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNM---- 748 (811)
Q Consensus 673 ~L~~~~s~~~~~~~~G~~g~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVAgGiGITP~lsil~~l~~~~---- 748 (811)
.|.. + ++| +.|.|.||||.+..+...+++++|||||+||||++++++++..+.
T Consensus 90 ~l~~-l-------~~G---------------d~v~v~gP~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~~~~ 146 (243)
T 2eix_A 90 YIDH-L-------NPG---------------DFLQVRGPKGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKNPKEKT 146 (243)
T ss_dssp HHHT-C-------CTT---------------CEEEEEEEECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCTTCCC
T ss_pred HHHC-C-------CCC---------------CEEEEECCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 7516-9-------999---------------9999977837788678877579999627228799999999983878884
Q ss_pred --------CCCHHH-HHHHHHHHHHCCCCE-EEEEECCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf --------453145-899998742029996-9999739999987656744447978888
Q 003546 749 --------KAIEEE-EENDLENGRDTGVNT-TIIIIDNNYEPFFFWTQKKGPIQDKKSI 797 (811)
Q Consensus 749 --------~~~~~~-~~~~l~~~~~~~~~~-~i~v~~~~~~~~~~w~g~~G~i~~~~~~ 797 (811)
++.++. +.+++.+......+. ++++++++.++ |.|.+|++++...+
T Consensus 147 ~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~---~~g~~g~v~~~~l~ 202 (243)
T 2eix_A 147 IINLIFANVNEDDILLRTELDDMAKKYSNFKVYYVLNNPPAG---WTGGVGFVSADMIK 202 (243)
T ss_dssp EEEEEEEEEEGGGCTTHHHHHHHHHHCTTEEEEEEEEECCTT---CCSEESSCCHHHHH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC---CCCCCCCCCHHHHH
T ss_conf 799999719979923899999999878996999996789844---45767701999999
Done!