Your job contains 1 sequence.
>003547
MGDQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHR
REIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQG
TSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTG
ELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSDLKD
SEDISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADAEENGKGL
EAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRK
ANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIP
DNVLAASVRTEIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEEDFCT
KSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPTFEDADKKESLLKGKTTKTAKKT
KTSSNLKCDKELQWNKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIG
VLEKLHKTQRGALRKCETLAHKIQCSFCHSSENSEASGEMVHYYNGKPVSADYNGGSKII
HSHRNCTEWAPNVYFEDDTVINLEAELARSRRIKCCCCGLKGAALGCYEKTCRKSFHVPC
AKLILQCRWDTDNFVMLCPLHTSSNLPNENPGSQESRKKCISKKLLTQHNKVAFKSDIST
NSWQSWENKLVLCCSALTVGEQVYCTDTIFC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003547
(811 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2133109 - symbol:BRCA1 "breast cancer suscepti... 743 7.1e-126 2
TAIR|locus:2024244 - symbol:BARD1 "AT1G04020" species:370... 371 1.5e-49 3
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 162 8.4e-11 1
UNIPROTKB|E7EQQ5 - symbol:TRIM5 "Tripartite motif-contain... 161 1.1e-10 1
UNIPROTKB|C9J060 - symbol:TRIM22 "E3 ubiquitin-protein li... 150 1.6e-09 1
UNIPROTKB|I3LH17 - symbol:I3LH17 "Uncharacterized protein... 169 3.8e-09 1
UNIPROTKB|F1RLV7 - symbol:LOC100738990 "Uncharacterized p... 169 3.9e-09 1
UNIPROTKB|E7EUM2 - symbol:BRCA1 "Breast cancer type 1 sus... 156 4.0e-09 2
UNIPROTKB|C9JWN8 - symbol:TRIM5 "Tripartite motif-contain... 146 4.3e-09 1
UNIPROTKB|F8W6N8 - symbol:TRIM5 "Tripartite motif-contain... 161 1.2e-08 1
UNIPROTKB|C9JIU5 - symbol:TRIM22 "E3 ubiquitin-protein li... 150 1.5e-08 2
UNIPROTKB|Q1ACD8 - symbol:TRIM5 "Tripartite motif-contain... 161 2.9e-08 1
UNIPROTKB|Q5C8T6 - symbol:TRIM5 "Tripartite motif-contain... 161 2.9e-08 1
UNIPROTKB|E2QWC2 - symbol:TRIM6 "Uncharacterized protein"... 158 2.9e-08 2
UNIPROTKB|Q5D7J1 - symbol:TRIM5 "Tripartite motif-contain... 160 3.8e-08 1
MGI|MGI:98178 - symbol:Trim30a "tripartite motif-containi... 168 4.6e-08 2
UNIPROTKB|Q9C035 - symbol:TRIM5 "Tripartite motif-contain... 161 4.9e-08 2
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 136 5.1e-08 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 136 5.1e-08 1
UNIPROTKB|Q5SPU2 - symbol:TRIM26 "Tripartite motif-contai... 136 5.1e-08 1
UNIPROTKB|Q3ZEE5 - symbol:TRIM5 "Tripartite motif-contain... 158 6.2e-08 1
UNIPROTKB|Q5D7I6 - symbol:TRIM5 "Tripartite motif-contain... 158 7.5e-08 1
UNIPROTKB|E9PFC7 - symbol:BRCA1 "Breast cancer type 1 sus... 158 7.7e-08 2
FB|FBgn0003330 - symbol:Sce "Sex combs extra" species:722... 156 8.2e-08 1
UNIPROTKB|F8W8H7 - symbol:BRCA1 "Breast cancer type 1 sus... 158 8.9e-08 3
UNIPROTKB|E7EMP0 - symbol:BRCA1 "Breast cancer type 1 sus... 158 9.4e-08 3
UNIPROTKB|Q5D7I9 - symbol:TRIM5 "Tripartite motif-contain... 156 1.0e-07 1
UNIPROTKB|Q5D7J0 - symbol:TRIM5 "Tripartite motif-contain... 156 1.0e-07 1
UNIPROTKB|Q6J6J0 - symbol:BRCA1 "Breast cancer type 1 sus... 159 1.2e-07 2
UNIPROTKB|Q3MJK3 - symbol:TRIM5 "Tripartite motif protein... 147 1.3e-07 2
UNIPROTKB|Q5D7J2 - symbol:TRIM5 "Tripartite motif-contain... 155 1.3e-07 1
UNIPROTKB|P38398 - symbol:BRCA1 "Breast cancer type 1 sus... 158 1.5e-07 3
UNIPROTKB|Q5D7H8 - symbol:TRIM5 "Tripartite motif-contain... 151 1.5e-07 2
UNIPROTKB|L7N078 - symbol:TRIM6 "Uncharacterized protein"... 158 1.6e-07 2
UNIPROTKB|Q2YEM9 - symbol:TRIM5 "Tripartite motif-contain... 154 1.7e-07 1
UNIPROTKB|Q5C8T8 - symbol:TRIM5 "Tripartite motif-contain... 154 1.7e-07 1
UNIPROTKB|Q9GKK8 - symbol:BRCA1 "Breast cancer type 1 sus... 158 1.9e-07 2
UNIPROTKB|Q5BN31 - symbol:TRIM5 "Tripartite motif-contain... 145 2.0e-07 2
UNIPROTKB|Q5D7I0 - symbol:TRIM5 "Tripartite motif-contain... 145 2.0e-07 2
UNIPROTKB|A6NLP3 - symbol:TRIM5 "Tripartite motif-contain... 161 2.0e-07 2
UNIPROTKB|C9JWC5 - symbol:TRIM22 "E3 ubiquitin-protein li... 150 2.1e-07 2
UNIPROTKB|Q2YEM8 - symbol:TRIM5 "Tripartite motif-contain... 153 2.2e-07 1
UNIPROTKB|I3LGG5 - symbol:LOC100738479 "Uncharacterized p... 152 2.8e-07 1
UNIPROTKB|H3BPZ9 - symbol:RNF166 "RING finger protein 166... 129 2.8e-07 1
UNIPROTKB|Q6J6I8 - symbol:BRCA1 "Breast cancer type 1 sus... 162 2.9e-07 4
UNIPROTKB|Q3B891 - symbol:BRCA1 "Breast cancer type 1 sus... 158 3.0e-07 2
UNIPROTKB|Q0PF16 - symbol:TRIM5 "Tripartite motif-contain... 151 3.7e-07 1
UNIPROTKB|Q2YEN2 - symbol:TRIM5 "Tripartite motif-contain... 151 3.7e-07 1
UNIPROTKB|E7ETR2 - symbol:BRCA1 "Breast cancer 1, early o... 158 3.9e-07 2
UNIPROTKB|E9PJJ9 - symbol:TRIM68 "E3 ubiquitin-protein li... 134 4.1e-07 1
UNIPROTKB|Q90X96 - symbol:brca1 "Breast and ovarian cance... 155 4.4e-07 3
UNIPROTKB|A2AE51 - symbol:TRIM26 "Tripartite motif-contai... 127 4.6e-07 1
UNIPROTKB|E2QWA4 - symbol:TRIM22 "Uncharacterized protein... 145 5.2e-07 2
UNIPROTKB|J3KSI2 - symbol:RNF138 "E3 ubiquitin-protein li... 126 6.0e-07 1
UNIPROTKB|J3QKM8 - symbol:RNF138 "E3 ubiquitin-protein li... 126 6.0e-07 1
UNIPROTKB|Q1ACD6 - symbol:TRIM5 "Tripartite motif-contain... 149 6.0e-07 1
UNIPROTKB|E7EQW4 - symbol:BRCA1 "Breast cancer type 1 sus... 140 6.1e-07 1
UNIPROTKB|Q9BYJ4 - symbol:TRIM34 "Tripartite motif-contai... 148 7.6e-07 1
UNIPROTKB|E7EWN5 - symbol:BRCA1 "Breast cancer type 1 sus... 158 8.1e-07 2
UNIPROTKB|Q1L721 - symbol:rnf138 "E3 ubiquitin-protein li... 138 1.1e-06 1
UNIPROTKB|Q5D7I3 - symbol:TRIM5 "Tripartite motif-contain... 146 1.3e-06 1
UNIPROTKB|E9PR29 - symbol:TRIM68 "E3 ubiquitin-protein li... 134 1.3e-06 1
UNIPROTKB|Q90X95 - symbol:bard1 "BRCA1-associated RING do... 127 1.4e-06 2
UNIPROTKB|Q58DK8 - symbol:TRIM38 "Tripartite motif-contai... 145 1.5e-06 1
UNIPROTKB|Q8IYM9 - symbol:TRIM22 "E3 ubiquitin-protein li... 150 1.6e-06 2
UNIPROTKB|A1YER5 - symbol:RING1 "E3 ubiquitin-protein lig... 143 1.7e-06 1
UNIPROTKB|A1YFY1 - symbol:RING1 "E3 ubiquitin-protein lig... 143 1.7e-06 1
UNIPROTKB|A2T6X5 - symbol:RING1 "E3 ubiquitin-protein lig... 143 1.7e-06 1
UNIPROTKB|Q8WMN5 - symbol:RING1 "E3 ubiquitin-protein lig... 143 1.7e-06 1
UNIPROTKB|Q5D7I2 - symbol:TRIM5 "Tripartite motif-contain... 147 1.7e-06 2
UNIPROTKB|B2RNG4 - symbol:TRIM6-TRIM34 "TRIM6-TRIM34 read... 148 1.7e-06 1
UNIPROTKB|F1MUV0 - symbol:RING1 "Uncharacterized protein"... 143 1.7e-06 1
RGD|1310896 - symbol:Trim6 "tripartite motif containing 6... 141 1.7e-06 2
UNIPROTKB|K7GLC7 - symbol:LOC100738479 "Uncharacterized p... 152 1.9e-06 2
UNIPROTKB|Q5TJF3 - symbol:RING1 "E3 ubiquitin-protein lig... 143 1.9e-06 1
UNIPROTKB|Q06587 - symbol:RING1 "E3 ubiquitin-protein lig... 143 1.9e-06 1
UNIPROTKB|A5D9P0 - symbol:RING1 "Ring finger protein 1" s... 143 1.9e-06 1
MGI|MGI:1101770 - symbol:Ring1 "ring finger protein 1" sp... 143 1.9e-06 1
RGD|3576 - symbol:Ring1 "ring finger protein 1" species:1... 143 1.9e-06 1
UNIPROTKB|F1N541 - symbol:TRIM34 "Uncharacterized protein... 147 2.0e-06 2
UNIPROTKB|Q1ACD5 - symbol:TRIM5 "Tripartite motif-contain... 144 2.1e-06 1
UNIPROTKB|Q5C8U1 - symbol:TRIM5 "Tripartite motif-contain... 144 2.1e-06 1
UNIPROTKB|Q5C8U3 - symbol:TRIM5 "Tripartite motif-contain... 144 2.3e-06 1
MGI|MGI:106657 - symbol:Trim21 "tripartite motif-containi... 143 2.5e-06 1
UNIPROTKB|Q2YEN0 - symbol:TRIM5 "Tripartite motif-contain... 151 2.5e-06 2
UNIPROTKB|Q587N6 - symbol:TRIM5 "Tripartite motif-contain... 151 2.5e-06 2
UNIPROTKB|A2AAZ5 - symbol:TRIM39 "E3 ubiquitin-protein li... 120 2.6e-06 1
UNIPROTKB|E1BQ22 - symbol:TRIM68 "Uncharacterized protein... 143 2.7e-06 1
RGD|2218 - symbol:Brca1 "breast cancer 1, early onset" sp... 156 2.7e-06 3
UNIPROTKB|Q5D7I5 - symbol:TRIM5 "Tripartite motif-contain... 144 2.8e-06 2
UNIPROTKB|Q7ZWM8 - symbol:rnf2-b "E3 ubiquitin-protein li... 140 2.9e-06 1
UNIPROTKB|Q587N7 - symbol:TRIM5 "Tripartite motif-contain... 143 2.9e-06 1
UNIPROTKB|Q66J69 - symbol:rnf2-a "E3 ubiquitin-protein li... 140 2.9e-06 1
UNIPROTKB|A2AE48 - symbol:TRIM26 "Tripartite motif-contai... 136 3.2e-06 1
DICTYBASE|DDB_G0278935 - symbol:rad18 "C3HC4-type zinc fi... 123 3.2e-06 2
UNIPROTKB|I3LUY7 - symbol:I3LUY7 "Uncharacterized protein... 119 3.3e-06 1
UNIPROTKB|I3L7C9 - symbol:BRCA1 "Uncharacterized protein"... 143 3.3e-06 3
UNIPROTKB|Q9C030 - symbol:TRIM6 "Tripartite motif-contain... 140 3.6e-06 2
MGI|MGI:2137352 - symbol:Trim6 "tripartite motif-containi... 137 3.7e-06 2
UNIPROTKB|F1RJD9 - symbol:LOC100738479 "Uncharacterized p... 152 3.8e-06 3
WARNING: Descriptions of 160 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2133109 [details] [associations]
symbol:BRCA1 "breast cancer susceptibility1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=RCA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0010332
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
KO:K10683 HSSP:P28990 EMBL:AY081328 EMBL:AF515728 EMBL:BT010547
IPI:IPI00526043 RefSeq:NP_193839.4 UniGene:At.32665
ProteinModelPortal:Q8RXD4 SMR:Q8RXD4 MINT:MINT-3289893
STRING:Q8RXD4 PaxDb:Q8RXD4 PRIDE:Q8RXD4 EnsemblPlants:AT4G21070.1
GeneID:827854 KEGG:ath:AT4G21070 TAIR:At4g21070 eggNOG:NOG274496
HOGENOM:HOG000084100 InParanoid:Q8RXD4 OMA:EWAPNVY PhylomeDB:Q8RXD4
ProtClustDB:CLSN2681611 Genevestigator:Q8RXD4 PANTHER:PTHR13763
Uniprot:Q8RXD4
Length = 941
Score = 743 (266.6 bits), Expect = 7.1e-126, Sum P(2) = 7.1e-126
Identities = 199/498 (39%), Positives = 271/498 (54%)
Query: 1 MGDQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHR 60
M D SHLE+MGRELKCPICLSL +SAVSL+CNHVFCNACIVKSMK + CPVCK+PYHR
Sbjct: 1 MADT-SHLERMGRELKCPICLSLYNSAVSLSCNHVFCNACIVKSMKMDATCPVCKIPYHR 59
Query: 61 REIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQG 120
REIR APHMD+LVS+YK+ME ASGI +FV+Q+ S + V DK QG
Sbjct: 60 REIRGAPHMDSLVSIYKNMEDASGIKLFVSQNNPSPSDKEKQVRDASVEKA-SDK-NRQG 117
Query: 121 TSKGKRFRR-----TSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTV 175
+ KG+ +R T + V+ G + KPS TKKRVQ+ Q E+ T+P + T
Sbjct: 118 SRKGRASKRNEYGKTKEIDVDAPGPIVMKPSSQTKKRVQLLQNLSAESLTKPTE-SVETA 176
Query: 176 KNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYI--TPPDVP 233
+ +++ + + E+P +NKEG LSPFFWLRDE+D E SSQ TE+D + TP +VP
Sbjct: 177 EKPKDYTENTVIRLDEHPSLNKEGN-LSPFFWLRDEDDGENSSQRTESDQLLGTTPVNVP 235
Query: 234 SFSDLKDSEDISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADA 293
SFSDL DS+ S S+ E + G D F+SE+FEWTQR CSPE+LPSP K +V
Sbjct: 236 SFSDLMDSDHESPSKED---EQQKPNPG-DMFDSEMFEWTQRPCSPEILPSPVKAKVLGR 291
Query: 294 EE---NGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALCPRNTNPNNMIE 350
+E K L S+ + G+A + + G E ++ T
Sbjct: 292 DEIDLTQKKLPKVKVASSKCKNRKAGSARNTVARRSIGVSQEDNMESSAAA-TISEQQDS 350
Query: 351 NGKLNKKGRKANSTAQKKYAKRDT-NKGSTTPATSNEESENFVQKQTSISNAKFSQKSSN 409
G R +T + AKR T +K +T S+ N + + S KSS
Sbjct: 351 RGTSGTIIRNDVNTDENVKAKRATRSKAQSTRVQSDLNVSNEADGKQGTKRKRSSIKSS- 409
Query: 410 RRGTCAAEPIPD-NVLAASVRTEIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCW 468
A PI N L S+ TEIV + G + P+ ++ S + +K R +
Sbjct: 410 -----PAHPIAGPNEL--SLGTEIVGK-GDQDQAHGPSDTHPEKRSPTEKPSLKKRGR-- 459
Query: 469 KINSQTE-EDFCTKSKRR 485
K N+ + +D K++++
Sbjct: 460 KSNASSSLKDLSGKTQKK 477
Score = 514 (186.0 bits), Expect = 7.1e-126, Sum P(2) = 7.1e-126
Identities = 121/308 (39%), Positives = 168/308 (54%)
Query: 508 DTVPQPSLIPTFEDADKKEXXXXXXXXXXXXXXXXXXXXXCDKELQWNKRMKASFSGISK 567
DT P+ PT + + KK +K+L+ + M +S +
Sbjct: 440 DTHPEKRS-PTEKPSLKKRGRKSNASSSLKDLSGKTQKKTSEKKLKLDSHMISSKATQPH 498
Query: 568 -DGLVGESKVQEGCSSTA-NETQSPEGVRGSSDIGVLEK---LHKTQRGA---LRKCE-T 618
+G++ Q G + N +S G + + V+EK ++K+ G LR+C +
Sbjct: 499 GNGILTAGLNQGGDKQDSRNNRKSTVG-KDDHTMQVIEKCSTINKSSSGGSAHLRRCNGS 557
Query: 619 LAHKIQCSFCHSSENSEASGEMVHYYNGKPVSADYNGGSKIIHSHRNCTEWAPNVYFEDD 678
L K C+FC SE++EASGEM HYY G+PVSAD+NGGSK+IH H+NC EWAPNVYF D
Sbjct: 558 LTKKFTCAFCQCSEDTEASGEMTHYYRGEPVSADFNGGSKVIHVHKNCAEWAPNVYFNDL 617
Query: 679 TVINLEAELARSRRIXXXXXXXXXXXXXXYEKTCRKSFHVPCAKLILQCRWDTDNFVMLC 738
T++NL+ EL RSRRI Y K+C+ SFHV CAKLI +CRWD FVMLC
Sbjct: 618 TIVNLDVELTRSRRISCSCCGLKGAALGCYNKSCKNSFHVTCAKLIPECRWDNVKFVMLC 677
Query: 739 PLHTSSNLPNENPGSQESRKKCISKKLL-TQHNKVAFKSDIST---NSWQSWENKLVLCC 794
PL S LP E S++ + K K+ L +Q +V+ K++I + + KLVL C
Sbjct: 678 PLDASIKLPCEEANSKDRKCKRTPKEPLHSQPKQVSGKANIRELHIKQFHGFSKKLVLSC 737
Query: 795 SALTVGEQ 802
S LTV E+
Sbjct: 738 SGLTVEEK 745
>TAIR|locus:2024244 [details] [associations]
symbol:BARD1 "AT1G04020" species:3702 "Arabidopsis
thaliana" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0009934 "regulation of meristem
structural organization" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006260 "DNA
replication" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0009555 "pollen development" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
EMBL:CP002684 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0048366 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 GO:GO:0009934 KO:K10683 PANTHER:PTHR13763
IPI:IPI00538630 RefSeq:NP_171898.2 UniGene:At.49850
ProteinModelPortal:F4I443 SMR:F4I443 EnsemblPlants:AT1G04020.1
GeneID:839329 KEGG:ath:AT1G04020 OMA:IEWAPQV Uniprot:F4I443
Length = 714
Score = 371 (135.7 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 83/207 (40%), Positives = 117/207 (56%)
Query: 596 SSDIGVLEKLHKTQRGALRKCETLAHKIQCSFCHSSENSEASGEMVHYYNGKPVSADYNG 655
+SD + EK+ K AL +T ++ C FC S+ SEA+GEM+HY G+PV D
Sbjct: 311 NSDDQLSEKISK----ALE--QTSSNITICGFCQSARVSEATGEMLHYSRGRPVDGDDIF 364
Query: 656 GSKIIHSHRNCTEWAPNVYFEDDTVINLEAELARSRRIXXXXXXXXXXXXXXYEKTCRKS 715
S +IH H C EWAP VY+E DTV NL+AELAR +I + K+CR+S
Sbjct: 365 RSNVIHVHSACIEWAPQVYYEGDTVKNLKAELARGMKIKCTKCSLKGAALGCFVKSCRRS 424
Query: 716 FHVPCAKLILQCRWDTDNFVMLCPLHTSSNLPNENPGSQESRKKCISKKLLTQHNKVAFK 775
+HVPCA+ I +CRWD ++F++LCP H+S PNE G + SR + + K N
Sbjct: 425 YHVPCAREISRCRWDYEDFLLLCPAHSSVKFPNEKSGHRVSRAEPLPKI-----NPAEL- 478
Query: 776 SDISTNSWQSWENKLVLCCSALTVGEQ 802
S ++ +LVLC SAL+ ++
Sbjct: 479 --CSLEQTPAFTKELVLCGSALSKSDK 503
Score = 206 (77.6 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 35/81 (43%), Positives = 56/81 (69%)
Query: 7 HLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAA 66
HL+K+ ELKCP+CL LL+ V L C+HVFC++C+ KS + S CPVCK + ++ R
Sbjct: 15 HLQKLELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESGCPVCKSKHPKKARRDL 74
Query: 67 PHMDNLVSVYKSMEVASGINI 87
M++++S+YKS+ A +++
Sbjct: 75 RFMESVISIYKSLNAAVSVHL 95
Score = 59 (25.8 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 32/121 (26%), Positives = 51/121 (42%)
Query: 387 ESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTE-IVDQHGKNIGSDLP 445
ESE T S + Q + N R A+E P N + + + + N + P
Sbjct: 179 ESEYDAANHTPESYTE--QAAKNVRDITASEQ-PSNAARKRICGDSFIQESSPNPKTQDP 235
Query: 446 TSLGKKQG--SDEDLHFMKTRKKCWKINSQTEEDFCTKSKRRKVDSTEVNVLENVSVVQK 503
T L + SD+ ++K + S TE+D SKR++ D T + +EN V K
Sbjct: 236 TLLRLMESLRSDDPTDYVKAQNHQQLPKSHTEQD----SKRKR-DITASDAMENHLKVPK 290
Query: 504 K 504
+
Sbjct: 291 R 291
Score = 44 (20.5 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 169 KLEGGTVKNTTGELKSSS 186
K+ GGT+ NT EL + S
Sbjct: 627 KVAGGTILNTEDELGAES 644
Score = 37 (18.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 171 EGGTVKNTTGEL 182
EG TVKN EL
Sbjct: 385 EGDTVKNLKAEL 396
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 162 (62.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 45/128 (35%), Positives = 60/128 (46%)
Query: 6 SHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN------CPVCKVPYH 59
S LE + E+ CPICL LL VS CNH FC ACI + +S N CPVC+V Y
Sbjct: 4 SVLEMIKEEVTCPICLELLKEPVSTDCNHSFCRACITINYESNRNTEGEGSCPVCRVCYL 63
Query: 60 RREIRAAPHMDNLVSV---YKSM-EVASGINIFVTQDESSTKSSGDLICGEQ---VTGGC 112
R +R H+ N+V +KS+ E +N+ E L C + + C
Sbjct: 64 FRNLRPNRHVANIVERLKGFKSIPEEEQKVNVCAQHGEKL-----QLFCKKDKMAICWLC 118
Query: 113 QDKVEHQG 120
+ EH G
Sbjct: 119 ERSQEHHG 126
>UNIPROTKB|E7EQQ5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI00879744 ProteinModelPortal:E7EQQ5 SMR:E7EQQ5
Ensembl:ENST00000412903 ArrayExpress:E7EQQ5 Bgee:E7EQQ5
Uniprot:E7EQQ5
Length = 209
Score = 161 (61.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA-SGINIFVTQDESSTKSSGDLI-C---GEQVTGGCQDKV 116
IR H+ N+V + ++++ G + D + L+ C G+ + C+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKV----DHCARHGEKLLLFCQEDGKVICWLCERSQ 121
Query: 117 EHQG 120
EH+G
Sbjct: 122 EHRG 125
>UNIPROTKB|C9J060 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00239700 ProteinModelPortal:C9J060 SMR:C9J060 STRING:C9J060
PRIDE:C9J060 Ensembl:ENST00000425490 ArrayExpress:C9J060
Bgee:C9J060 Uniprot:C9J060
Length = 203
Score = 150 (57.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 13 RELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHRREIRA 65
+E+ CPICL LL+ +SL C H FC ACI +K S+CPVC+ + +R
Sbjct: 11 KEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRP 70
Query: 66 APHMDNLVSVYKSMEVA--SGINIFVTQDESST-----KSSGDLICGEQVTGGCQDKVEH 118
H+ N+V K ++++ G V + K G +IC C+ EH
Sbjct: 71 NRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWV-----CELSQEH 125
Query: 119 QG 120
QG
Sbjct: 126 QG 127
>UNIPROTKB|I3LH17 [details] [associations]
symbol:I3LH17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
OMA:WILGVCA Ensembl:ENSSSCT00000029217 Uniprot:I3LH17
Length = 483
Score = 169 (64.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 48/126 (38%), Positives = 61/126 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACI-VKSMKS--G----SNCPVCKVPYHR 60
LE + E+ CPICL LL +SL C H FC C+ V S KS G SNCPVC+V Y
Sbjct: 6 LENIREEVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMMGLEGKSNCPVCRVSYQP 65
Query: 61 REIRAAPHMDNLVS----VYKSMEVASGINIFVTQDESST---KSSGDLICGEQVTGGCQ 113
+R H+ N+V V S EV N+ V +E K G +IC + Q
Sbjct: 66 GNLRLNRHVANIVERLRKVSLSPEVEQKGNLCVHHEEKLLFFCKEDGKVICW--ICERSQ 123
Query: 114 DKVEHQ 119
+HQ
Sbjct: 124 QHCDHQ 129
>UNIPROTKB|F1RLV7 [details] [associations]
symbol:LOC100738990 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000016021 OMA:HGEGGIS Uniprot:F1RLV7
Length = 492
Score = 169 (64.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 48/126 (38%), Positives = 61/126 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACI-VKSMKS--G----SNCPVCKVPYHR 60
LE + E+ CPICL LL +SL C H FC C+ V S KS G SNCPVC+V Y
Sbjct: 6 LENIREEVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMMGLEGKSNCPVCRVSYQP 65
Query: 61 REIRAAPHMDNLVS----VYKSMEVASGINIFVTQDESST---KSSGDLICGEQVTGGCQ 113
+R H+ N+V V S EV N+ V +E K G +IC + Q
Sbjct: 66 GNLRLNRHVANIVERLRKVSLSPEVEQKGNLCVHHEEKLLFFCKEDGKVICW--ICERSQ 123
Query: 114 DKVEHQ 119
+HQ
Sbjct: 124 QHCDHQ 129
>UNIPROTKB|E7EUM2 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00946315
ProteinModelPortal:E7EUM2 SMR:E7EUM2 Ensembl:ENST00000478531
UCSC:uc002idc.1 ArrayExpress:E7EUM2 Bgee:E7EUM2 Uniprot:E7EUM2
Length = 623
Score = 156 (60.0 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 68/254 (26%), Positives = 119/254 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEHQGTSKGKRFRRTSKATVEPS--GTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEG 172
+ + S+ + + +V+ S GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLETSLSVQLSNLGTVRT---LRTKQRIQ------PQKTSVYIELGS 183
Query: 173 GTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYIT 228
+ ++T + SV +E I +GT RDE + +K++ + +ETD T
Sbjct: 184 DSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTNT 235
Query: 229 PPDVPSFSDLKDSE 242
PS +DL +E
Sbjct: 236 EHHQPSNNDLNTTE 249
Score = 63 (27.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 34/161 (21%), Positives = 63/161 (39%)
Query: 363 STAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDN 422
+T +K+ A+R K A S ESE V + S +++ ++ +R T I
Sbjct: 246 NTTEKRAAERHPEKYQGE-AASGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQ 304
Query: 423 VLAASVRTEIVDQHGKNIGSDLPTSLGKKQGSDEDLHF--MKTRKKCWKINSQTEEDFCT 480
A + +++QHG + P+ + EDL T +K + SQ ++
Sbjct: 305 QEMAELEA-VLEQHGSQPSNSYPSIISDSSAL-EDLRNPEQSTSEKA-VLTSQKSSEYPI 361
Query: 481 KSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPTFED 521
+ + + V + S + K PS P+ +D
Sbjct: 362 SQNPEGLSADKFEVSADSSTSKNKEPGVERSSPSKCPSLDD 402
Score = 44 (20.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 12/64 (18%), Positives = 26/64 (40%)
Query: 573 ESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQCSFCHSSE 632
+ + GC S + ++ G+ SDI ++ Q ++ + +A H S+
Sbjct: 261 QGEAASGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEAVLEQHGSQ 320
Query: 633 NSEA 636
S +
Sbjct: 321 PSNS 324
Score = 42 (19.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 556 KRMKASFSGISKDGLVGESKVQEGCSSTANET 587
+R + G + G E+ V E CS ++++
Sbjct: 254 ERHPEKYQGEAASGCESETSVSEDCSGLSSQS 285
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 146 (56.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPH 68
IR H
Sbjct: 66 NIRPNRH 72
>UNIPROTKB|F8W6N8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI01012489 ProteinModelPortal:F8W6N8 SMR:F8W6N8
Ensembl:ENST00000396853 ArrayExpress:F8W6N8 Bgee:F8W6N8
Uniprot:F8W6N8
Length = 327
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA-SGINIFVTQDESSTKSSGDLI-C---GEQVTGGCQDKV 116
IR H+ N+V + ++++ G + D + L+ C G+ + C+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKV----DHCARHGEKLLLFCQEDGKVICWLCERSQ 121
Query: 117 EHQG 120
EH+G
Sbjct: 122 EHRG 125
>UNIPROTKB|C9JIU5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00884241 ProteinModelPortal:C9JIU5 SMR:C9JIU5 STRING:C9JIU5
Ensembl:ENST00000414641 ArrayExpress:C9JIU5 Bgee:C9JIU5
Uniprot:C9JIU5
Length = 227
Score = 150 (57.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 13 RELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHRREIRA 65
+E+ CPICL LL+ +SL C H FC ACI +K S+CPVC+ + +R
Sbjct: 11 KEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRP 70
Query: 66 APHMDNLVSVYKSMEVA--SGINIFVTQDESST-----KSSGDLICGEQVTGGCQDKVEH 118
H+ N+V K ++++ G V + K G +IC C+ EH
Sbjct: 71 NRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWV-----CELSQEH 125
Query: 119 QG 120
QG
Sbjct: 126 QG 127
Score = 40 (19.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 485 RKVDSTEVNVLENVS 499
+K++ EVNVL+N++
Sbjct: 203 QKLEEGEVNVLDNLA 217
>UNIPROTKB|Q1ACD8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9597 "Pan paniscus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:DQ229282 ProteinModelPortal:Q1ACD8 SMR:Q1ACD8
Uniprot:Q1ACD8
Length = 493
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA-SGINIFVTQDESSTKSSGDLI-C---GEQVTGGCQDKV 116
IR H+ N+V + ++++ G + D + L+ C G+ + C+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKV----DHCARHGEKLLLFCQEDGKVICWLCERSQ 121
Query: 117 EHQG 120
EH+G
Sbjct: 122 EHRG 125
>UNIPROTKB|Q5C8T6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9595 "Gorilla gorilla gorilla" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY899872 EMBL:AY899866 EMBL:AY899867
EMBL:AY899868 EMBL:AY899869 EMBL:AY899870 EMBL:AY899871
EMBL:AY710300 EMBL:AY740620 EMBL:DQ298178 EMBL:AY843510
EMBL:AY923178 EMBL:DQ437600 ProteinModelPortal:Q5C8T6 SMR:Q5C8T6
Uniprot:Q5C8T6
Length = 493
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHEKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA-SGINIFVTQDESSTKSSGDLI-C---GEQVTGGCQDKV 116
IR H+ N+V + ++++ G + D + L+ C G+ + C+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKV----DHCARHGEKLLLFCQEDGKVICWLCERSQ 121
Query: 117 EHQG 120
EH+G
Sbjct: 122 EHRG 125
>UNIPROTKB|E2QWC2 [details] [associations]
symbol:TRIM6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
EMBL:AAEX03012850 Ensembl:ENSCAFT00000010112 Uniprot:E2QWC2
Length = 839
Score = 158 (60.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 37/117 (31%), Positives = 56/117 (47%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACI-------VKSMKSGSNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ VS+ C H FC ACI V S+CPVC+ Y ++R
Sbjct: 40 EVTCPICLELLTEPVSIDCGHSFCQACIMGNSTELVMGQDGESSCPVCQTSYQPGDLRPN 99
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ N+ + + + G+ + VT + L C G+ + C+ EH+G
Sbjct: 100 RHLANIAERLREVVLGPGMQLKVTLCAHHGEKL-QLFCKEDGKLICWLCERSQEHRG 155
Score = 56 (24.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 431 EIVDQHGKNIGSDLPTSLGKKQGSDEDLHF-MKTRKKCWKINSQTEED-FCTK-SKRRKV 487
E+V ++ +N+ + + L K+Q E L ++ + WK QTE T+ ++ R +
Sbjct: 485 EVVKEYQENLQAAVER-LRKEQQKAEKLETDIRGERTSWKYQIQTERQRIRTEFNQLRSI 543
Query: 488 -DSTEVNVLENVSVVQKK 504
DS E VL+ + +K+
Sbjct: 544 LDSEEQRVLQKLEEEEKR 561
Score = 47 (21.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 447 SLGKKQGSDEDLHFMKTRKKC--WKINSQTEEDF 478
+LG +QG+D + + R +C W I Q + ++
Sbjct: 726 NLGVRQGTDNQNVYSRYRPQCGYWVIGLQNKFEY 759
Score = 44 (20.5 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 486 KVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
+ + + +L++VS V K++ T+ +P +PT
Sbjct: 268 RCQGSAMELLQDVSDVMKRSEFWTLKKPEALPT 300
>UNIPROTKB|Q5D7J1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9598 "Pan troglodytes" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 HSSP:Q14134 GO:GO:0031664 CTD:85363
eggNOG:NOG253216 KO:K10648 EMBL:AH014830 EMBL:AY740617
EMBL:AY843506 EMBL:DQ298177 EMBL:AY923177 EMBL:DQ437595
RefSeq:NP_001012668.1 UniGene:Ptr.6259 ProteinModelPortal:Q5D7J1
SMR:Q5D7J1 STRING:Q5D7J1 GeneID:503563 KEGG:ptr:503563
NextBio:20866205 Uniprot:Q5D7J1
Length = 493
Score = 160 (61.4 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 NIRPNRHVANIVEKLREVKLS 86
>MGI|MGI:98178 [details] [associations]
symbol:Trim30a "tripartite motif-containing 30A" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IMP] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IMP]
[GO:0034122 "negative regulation of toll-like receptor signaling
pathway" evidence=IMP] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IMP] [GO:1900226 "negative regulation of NLRP3
inflammasome complex assembly" evidence=IMP] [GO:2000378 "negative
regulation of reactive oxygen species metabolic process"
evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
MGI:MGI:98178 Pfam:PF00097 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0032720 GO:GO:0032715 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:CH466531 GO:GO:0045732 GO:GO:2000378 InterPro:IPR017907
GO:GO:0034122 GO:GO:0051865 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 eggNOG:NOG310455
EMBL:J03776 EMBL:AF220014 EMBL:AF220015 EMBL:AF220016 EMBL:AK134144
EMBL:AK137506 EMBL:AC122400 EMBL:AC142110 EMBL:BC005447
IPI:IPI00466858 IPI:IPI00875139 PIR:A30891 RefSeq:NP_033125.2
UniGene:Mm.295578 PDB:2ECW PDBsum:2ECW ProteinModelPortal:P15533
SMR:P15533 STRING:P15533 PRIDE:P15533 Ensembl:ENSMUST00000076922
GeneID:20128 KEGG:mmu:20128 CTD:20128 InParanoid:P15533 OMA:AICLLCE
OrthoDB:EOG4229JJ EvolutionaryTrace:P15533 NextBio:297627
Bgee:P15533 CleanEx:MM_TRIM30 Genevestigator:P15533
GermOnline:ENSMUSG00000030921 GO:GO:1900226 Uniprot:P15533
Length = 496
Score = 168 (64.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 46/128 (35%), Positives = 61/128 (47%)
Query: 6 SHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG------SNCPVCKVPYH 59
S LE + E+ CPICL LL VS CNH FC ACI + +S NCPVC+VPY
Sbjct: 4 SVLEMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 63
Query: 60 RREIRAAPHMDNLVSV---YKSM-EVASGINIFVTQDESSTKSSGDLICGEQ---VTGGC 112
+R H+ N+V +KS+ E +NI E L C + + C
Sbjct: 64 FGNLRPNLHVANIVERLKGFKSIPEEEQKVNICAQHGEKLR-----LFCRKDMMVICWLC 118
Query: 113 QDKVEHQG 120
+ EH+G
Sbjct: 119 ERSQEHRG 126
Score = 37 (18.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 349 IENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSI 398
+EN + KG + +++ + K EESEN ++ QT +
Sbjct: 179 VENVQRQFKGLRDLLDSKENEELQKLKKEKKEVMEKLEESENELEDQTEL 228
Score = 37 (18.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 9/52 (17%), Positives = 25/52 (48%)
Query: 573 ESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQ 624
E+++Q + + + + S + L+KL K ++ + K E ++++
Sbjct: 172 ENQIQINVENVQRQFKGLRDLLDSKENEELQKLKKEKKEVMEKLEESENELE 223
>UNIPROTKB|Q9C035 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0008329
"pattern recognition receptor activity" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IMP]
[GO:0002218 "activation of innate immune response" evidence=IDA]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0070206 "protein trimerization" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0019048 EMBL:CH471064
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
GO:GO:0070206 InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870
PROSITE:PS50188 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
EMBL:AC015691 HOVERGEN:HBG001357 OrthoDB:EOG4229JJ GO:GO:0031664
EMBL:AF220025 EMBL:AF220026 EMBL:AF220027 EMBL:AF220028
EMBL:AF220029 EMBL:AY625000 EMBL:DQ301444 EMBL:DQ301445
EMBL:DQ301446 EMBL:DQ301447 EMBL:DQ301448 EMBL:DQ301449
EMBL:DQ301450 EMBL:DQ301451 EMBL:DQ301452 EMBL:DQ301453
EMBL:DQ301454 EMBL:DQ301455 EMBL:DQ301456 EMBL:DQ301457
EMBL:DQ301458 EMBL:DQ301459 EMBL:DQ301460 EMBL:DQ301461
EMBL:DQ301462 EMBL:DQ301463 EMBL:DQ301464 EMBL:DQ301465
EMBL:DQ301466 EMBL:DQ301467 EMBL:DQ301468 EMBL:DQ301469
EMBL:DQ301470 EMBL:DQ301471 EMBL:DQ301472 EMBL:DQ301473
EMBL:DQ301474 EMBL:DQ301475 EMBL:DQ301476 EMBL:DQ301477
EMBL:DQ301478 EMBL:DQ301479 EMBL:DQ301480 EMBL:DQ288685
EMBL:JF928461 EMBL:JF928462 EMBL:AK027593 EMBL:EU260465
EMBL:BC021258 IPI:IPI00394972 IPI:IPI00394973 IPI:IPI00394974
IPI:IPI00394975 IPI:IPI00873422 RefSeq:NP_149023.2
RefSeq:NP_149083.2 RefSeq:NP_149084.2 UniGene:Hs.125300 PDB:2ECV
PDB:2YRG PDBsum:2ECV PDBsum:2YRG ProteinModelPortal:Q9C035
SMR:Q9C035 IntAct:Q9C035 STRING:Q9C035 PhosphoSite:Q9C035
DMDM:38605459 PaxDb:Q9C035 PRIDE:Q9C035 DNASU:85363
Ensembl:ENST00000380027 Ensembl:ENST00000380034
Ensembl:ENST00000396847 Ensembl:ENST00000396855
Ensembl:ENST00000433961 GeneID:85363 KEGG:hsa:85363 UCSC:uc001mbm.2
UCSC:uc001mbn.3 UCSC:uc001mbp.3 CTD:85363 GeneCards:GC11M005641
H-InvDB:HIX0009393 HGNC:HGNC:16276 HPA:CAB013497 HPA:HPA023420
HPA:HPA023422 MIM:608487 neXtProt:NX_Q9C035 PharmGKB:PA38109
eggNOG:NOG253216 KO:K10648 OMA:WILGVCA ChiTaRS:TRIM5
EvolutionaryTrace:Q9C035 GenomeRNAi:85363 NextBio:75883
ArrayExpress:Q9C035 Bgee:Q9C035 Genevestigator:Q9C035
GermOnline:ENSG00000132256 Uniprot:Q9C035
Length = 493
Score = 161 (61.7 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA-SGINIFVTQDESSTKSSGDLI-C---GEQVTGGCQDKV 116
IR H+ N+V + ++++ G + D + L+ C G+ + C+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKV----DHCARHGEKLLLFCQEDGKVICWLCERSQ 121
Query: 117 EHQG 120
EH+G
Sbjct: 122 EHRG 125
Score = 44 (20.5 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 471 NSQTEEDFCTKSKRRKVDSTE-------VNVLENVSVVQKKTYKDTVPQPSLIP 517
NS+TE T+S R + E + +L+ V V K+T T+ +P P
Sbjct: 216 NSETEMVQQTQSLRELISDLEHRLQGSVMELLQGVDGVIKRTENVTLKKPETFP 269
Score = 38 (18.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 209 RDEEDREKSSQHTETDAYITPPDVPSF-SDLKDSEDISSSELSPTAE-VHGKSDGLDFFE 266
++EED KS ++ET+ + SDL+ S EL + V +++ + +
Sbjct: 205 KEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQGSVMELLQGVDGVIKRTENVTLKK 264
Query: 267 SEIFEWTQRAC--SPEL 281
E F QR +P+L
Sbjct: 265 PETFPKNQRRVFRAPDL 281
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 136 (52.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMK-SGSN--CPVCKVPYHRREIR 64
L + E+ C ICL L V++ C HVFC +C SGS CP+CK P+ + IR
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIR 66
Query: 65 AAPHMDNLVSVYKSMEVASGINIF-VTQDESSTK 97
+ +LV + ++V G VT+++ K
Sbjct: 67 PVWQLASLVENIERLKVDKGRQPGEVTREQQDAK 100
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 136 (52.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
L + E CPICL L V++ C H FC +C+ S K + CPVC+ + + R
Sbjct: 7 LVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCFPYKSFR 66
Query: 65 AAPHMDNLVSVYKSMEV 81
P + NL + K +++
Sbjct: 67 RNPQLRNLTEIAKQLQI 83
>UNIPROTKB|Q5SPU2 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00647769
SMR:Q5SPU2 Ensembl:ENST00000415789 Ensembl:ENST00000418026
Ensembl:ENST00000419171 Ensembl:ENST00000419401
Ensembl:ENST00000422881 Ensembl:ENST00000433361
Ensembl:ENST00000433836 Ensembl:ENST00000453442 UCSC:uc003npu.1
HOGENOM:HOG000120116 Uniprot:Q5SPU2
Length = 157
Score = 136 (52.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMK-SGSN--CPVCKVPYHRREIR 64
L + E+ C ICL L V++ C HVFC +C SGS CP+CK P+ + IR
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIR 66
Query: 65 AAPHMDNLVSVYKSMEVASGINIF-VTQDESSTK 97
+ +LV + ++V G VT+++ K
Sbjct: 67 PVWQLASLVENIERLKVDKGRQPGEVTREQQDAK 100
>UNIPROTKB|Q3ZEE5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9580 "Hylobates lar" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY923180 ProteinModelPortal:Q3ZEE5
SMR:Q3ZEE5 Uniprot:Q3ZEE5
Length = 493
Score = 158 (60.7 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK----SMKSGS-NCPVCKVPYHRRE 62
L + E+ CPICL LL+ +SL C H FC AC+ SM G +CPVC++ Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDGERSCPVCRISYQHKN 65
Query: 63 IRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 IRPNRHVANIVEKLREVKLS 85
>UNIPROTKB|Q5D7I6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:121123 "Alouatta sara" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 HOVERGEN:HBG001357 EMBL:AY843511
ProteinModelPortal:Q5D7I6 SMR:Q5D7I6 GO:GO:0031664 Uniprot:Q5D7I6
Length = 551
Score = 158 (60.7 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS--NCPVCKVPYHRREIRA 65
L + E+ CPICL LL+ +SL C H FC ACI + K +CP+C+V YH +R
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESRERSCPLCRVSYHSENLRP 65
Query: 66 APHMDNLVS----VYKSMEVASGINIFVTQDESST---KSSGDLICGEQVTGGCQDKVEH 118
H+ N+ V S E ++ E + G++IC C+ EH
Sbjct: 66 NRHLANIAERLREVMLSPEEGQKVDRCARHGEKLLLFCQQHGNVICWL-----CERSEEH 120
Query: 119 QG 120
+G
Sbjct: 121 RG 122
>UNIPROTKB|E9PFC7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0007420
GO:GO:0032355 GO:GO:0005759 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0007584
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 IPI:IPI00945705 RefSeq:NP_009231.2 GeneID:672
HGNC:HGNC:1100 ChiTaRS:BRCA1 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 ProteinModelPortal:E9PFC7 SMR:E9PFC7
Ensembl:ENST00000471181 UCSC:uc002ict.3 ArrayExpress:E9PFC7
Bgee:E9PFC7 Uniprot:E9PFC7
Length = 1884
Score = 158 (60.7 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 68/255 (26%), Positives = 118/255 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEH--QGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLE 171
+ + Q + + TS + + GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLQETSLSVQLSNLGTVRT---LRTKQRIQ------PQKTSVYIELG 183
Query: 172 GGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYI 227
+ ++T + SV +E I +GT RDE + +K++ + +ETD
Sbjct: 184 SDSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTN 235
Query: 228 TPPDVPSFSDLKDSE 242
T PS +DL +E
Sbjct: 236 TEHHQPSNNDLNTTE 250
Score = 60 (26.2 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 44/232 (18%), Positives = 93/232 (40%)
Query: 287 KTQVADAEENGKGLEAALQGSNTVVDISNGNAT--CV----IFEQGNGNENEGRCKALCP 340
K V+D EE G GLE Q ++ D + G A C + E +G ++
Sbjct: 1338 KELVSDDEERGTGLEENNQEEQSM-DSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQ 1396
Query: 341 RNTNPNNMI----ENGKLNKKGRKANSTAQKKYAK--RDTN--KGSTTPATSNEESENFV 392
R+T +N+I E +L + S Y D++ + P S E ++ +
Sbjct: 1397 RDTMQHNLIKLQQEMAELEAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKDSHI 1456
Query: 393 QKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEIVDQHGKNIGSDLPTSLGKKQ 452
Q + N+ FS++ ++ + ++ + D+ + +D TS K+
Sbjct: 1457 HGQRN--NSMFSKRPREHISVLTSQKSSEYPISQNPEGLSADKF--EVSADSSTSKNKEP 1512
Query: 453 GSDEDLHFMKTRKKCWKINSQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKK 504
G + + KC ++ + C+ S + + ++ +++ V V +++
Sbjct: 1513 GVERS-----SPSKCPSLDDRWYMHSCSGSLQNRNYPSQEELIKVVDVEEQQ 1559
Score = 55 (24.4 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 351 NGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFV---QKQTSISNAKFSQKS 407
+G L K+ K ++K + N+ + P + + F QK + NAK S K
Sbjct: 889 SGSLKKQSPKVTFECEQKEENQGKNESNIKPVQTVNITAGFPVVGQKDKPVDNAKCSIKG 948
Query: 408 SNR 410
+R
Sbjct: 949 GSR 951
Score = 50 (22.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 555 NKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS--DIGVLEKLHKTQRGA 612
N+ + ++ S IS++ + E+ +E SS NE S GSS +IG ++ + + G
Sbjct: 1016 NENIPSTVSTISRNN-IRENVFKEASSSNINEVGSSTNEVGSSINEIGSSDENIQAELGR 1074
Query: 613 LR 614
R
Sbjct: 1075 NR 1076
Score = 49 (22.3 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 566 SKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQC 625
S D +GE+ GC S + ++ G+ SDI ++ Q ++ + +A
Sbjct: 1360 SMDSNLGEAA--SGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEAV 1417
Query: 626 SFCHSSENSEA 636
H S+ S +
Sbjct: 1418 LEQHGSQPSNS 1428
Score = 47 (21.6 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 24/96 (25%), Positives = 35/96 (36%)
Query: 326 GNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSN 385
G +C + C NP +I +K R N T KY S +
Sbjct: 792 GKAKTEPNKCVSQCAAFENPKGLIHG--CSKDNR--NDTEGFKYPLGHEVNHSRETSIEM 847
Query: 386 EESE---NFVQKQTSISNAK-FSQKSS--NRRGTCA 415
EESE ++Q +S + F+ S+ N CA
Sbjct: 848 EESELDAQYLQNTFKVSKRQSFAPFSNPGNAEEECA 883
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 23/103 (22%), Positives = 38/103 (36%)
Query: 316 GNATCVIFEQGNGN-ENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDT 374
GN T +I +G +N R L P + + L + + + + +++
Sbjct: 960 GNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNE-- 1017
Query: 375 NKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAE 417
N ST S V K+ S SN S+N G+ E
Sbjct: 1018 NIPSTVSTISRNNIRENVFKEASSSNINEVGSSTNEVGSSINE 1060
Score = 39 (18.8 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 491 EVNVLENVSVVQKKTYKDTVP 511
++N + + V+Q + YK ++P
Sbjct: 1079 KLNAMLRLGVLQPEVYKQSLP 1099
Score = 39 (18.8 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNK------GSTTPATS--NEESENFVQ 393
NT ++ N LN ++A +KY + G+ T A+S +E S +
Sbjct: 235 NTE-HHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLT 293
Query: 394 K-QTSISNAKFSQKS 407
K + ++ A+F KS
Sbjct: 294 KDRMNVEKAEFCNKS 308
Score = 37 (18.1 bits), Expect = 8.8e-06, Sum P(4) = 8.8e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 564 GISKDGLVGESKVQEGCSSTANET 587
G + G E+ V E CS ++++
Sbjct: 1366 GEAASGCESETSVSEDCSGLSSQS 1389
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 156 (60.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 41/119 (34%), Positives = 63/119 (52%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L ++ C H FC+ CIV +++SG+ CP C K +R +RA P+ D
Sbjct: 43 ELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNFD 102
Query: 71 NLVS-VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGKRFR 128
L+S +Y S E I V + T+S L+ + G ++ Q ++ +RFR
Sbjct: 103 LLISKIYPSREEYEAIQEKVMAKFNQTQSQQALV--NSINEG----IKLQSQNRPQRFR 155
>UNIPROTKB|F8W8H7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930098 ProteinModelPortal:F8W8H7 SMR:F8W8H7
PRIDE:F8W8H7 Ensembl:ENST00000354071 ArrayExpress:F8W8H7
Bgee:F8W8H7 Uniprot:F8W8H7
Length = 1598
Score = 158 (60.7 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 68/255 (26%), Positives = 118/255 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEH--QGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLE 171
+ + Q + + TS + + GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLQETSLSVQLSNLGTVRT---LRTKQRIQ------PQKTSVYIELG 183
Query: 172 GGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYI 227
+ ++T + SV +E I +GT RDE + +K++ + +ETD
Sbjct: 184 SDSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTN 235
Query: 228 TPPDVPSFSDLKDSE 242
T PS +DL +E
Sbjct: 236 TEHHQPSNNDLNTTE 250
Score = 55 (24.4 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 351 NGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFV---QKQTSISNAKFSQKS 407
+G L K+ K ++K + N+ + P + + F QK + NAK S K
Sbjct: 889 SGSLKKQSPKVTFECEQKEENQGKNESNIKPVQTVNITAGFPVVGQKDKPVDNAKCSIKG 948
Query: 408 SNR 410
+R
Sbjct: 949 GSR 951
Score = 50 (22.7 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 555 NKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS--DIGVLEKLHKTQRGA 612
N+ + ++ S IS++ + E+ +E SS NE S GSS +IG ++ + + G
Sbjct: 1016 NENIPSTVSTISRNN-IRENVFKEASSSNINEVGSSTNEVGSSINEIGSSDENIQAELGR 1074
Query: 613 LR 614
R
Sbjct: 1075 NR 1076
Score = 49 (22.3 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 566 SKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQC 625
S D +GE+ GC S + ++ G+ SDI ++ Q ++ + +A
Sbjct: 1360 SMDSNLGEAA--SGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEAV 1417
Query: 626 SFCHSSENSEA 636
H S+ S +
Sbjct: 1418 LEQHGSQPSNS 1428
Score = 47 (21.6 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 24/96 (25%), Positives = 35/96 (36%)
Query: 326 GNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSN 385
G +C + C NP +I +K R N T KY S +
Sbjct: 792 GKAKTEPNKCVSQCAAFENPKGLIHG--CSKDNR--NDTEGFKYPLGHEVNHSRETSIEM 847
Query: 386 EESE---NFVQKQTSISNAK-FSQKSS--NRRGTCA 415
EESE ++Q +S + F+ S+ N CA
Sbjct: 848 EESELDAQYLQNTFKVSKRQSFAPFSNPGNAEEECA 883
Score = 46 (21.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 287 KTQVADAEENGKGLEAALQGSNTVVDISNGNAT--CV----IFEQGNGNENEGRCKALCP 340
K V+D EE G GLE Q ++ D + G A C + E +G ++
Sbjct: 1338 KELVSDDEERGTGLEENNQEEQSM-DSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQ 1396
Query: 341 RNTNPNNMIE 350
R+T +N+I+
Sbjct: 1397 RDTMQHNLIK 1406
Score = 42 (19.8 bits), Expect = 5.6e-06, Sum P(4) = 5.6e-06
Identities = 23/103 (22%), Positives = 38/103 (36%)
Query: 316 GNATCVIFEQGNGN-ENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDT 374
GN T +I +G +N R L P + + L + + + + +++
Sbjct: 960 GNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNE-- 1017
Query: 375 NKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAE 417
N ST S V K+ S SN S+N G+ E
Sbjct: 1018 NIPSTVSTISRNNIRENVFKEASSSNINEVGSSTNEVGSSINE 1060
Score = 39 (18.8 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 491 EVNVLENVSVVQKKTYKDTVP 511
++N + + V+Q + YK ++P
Sbjct: 1079 KLNAMLRLGVLQPEVYKQSLP 1099
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNK------GSTTPATS--NEESENFVQ 393
NT ++ N LN ++A +KY + G+ T A+S +E S +
Sbjct: 235 NTE-HHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLT 293
Query: 394 K-QTSISNAKFSQKS 407
K + ++ A+F KS
Sbjct: 294 KDRMNVEKAEFCNKS 308
Score = 37 (18.1 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 564 GISKDGLVGESKVQEGCSSTANET 587
G + G E+ V E CS ++++
Sbjct: 1366 GEAASGCESETSVSEDCSGLSSQS 1389
>UNIPROTKB|E7EMP0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930496 ProteinModelPortal:E7EMP0 SMR:E7EMP0
PRIDE:E7EMP0 Ensembl:ENST00000346315 ArrayExpress:E7EMP0
Bgee:E7EMP0 Uniprot:E7EMP0
Length = 1624
Score = 158 (60.7 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 68/255 (26%), Positives = 118/255 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEH--QGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLE 171
+ + Q + + TS + + GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLQETSLSVQLSNLGTVRT---LRTKQRIQ------PQKTSVYIELG 183
Query: 172 GGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYI 227
+ ++T + SV +E I +GT RDE + +K++ + +ETD
Sbjct: 184 SDSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTN 235
Query: 228 TPPDVPSFSDLKDSE 242
T PS +DL +E
Sbjct: 236 TEHHQPSNNDLNTTE 250
Score = 55 (24.4 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 351 NGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFV---QKQTSISNAKFSQKS 407
+G L K+ K ++K + N+ + P + + F QK + NAK S K
Sbjct: 889 SGSLKKQSPKVTFECEQKEENQGKNESNIKPVQTVNITAGFPVVGQKDKPVDNAKCSIKG 948
Query: 408 SNR 410
+R
Sbjct: 949 GSR 951
Score = 52 (23.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 29/123 (23%), Positives = 54/123 (43%)
Query: 287 KTQVADAEENGKGLEAALQGSNTVVDISNGNAT--CV----IFEQGNGNENEGRCKALCP 340
K V+D EE G GLE Q ++ D + G A C + E +G ++
Sbjct: 1338 KELVSDDEERGTGLEENNQEEQSM-DSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQ 1396
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISN 400
R+T +N+I KL ++ + + ++ ++ + S +S E ++ TS +
Sbjct: 1397 RDTMQHNLI---KLQQEMAELEAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKD 1453
Query: 401 AKF 403
A+F
Sbjct: 1454 AEF 1456
Score = 50 (22.7 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 555 NKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS--DIGVLEKLHKTQRGA 612
N+ + ++ S IS++ + E+ +E SS NE S GSS +IG ++ + + G
Sbjct: 1016 NENIPSTVSTISRNN-IRENVFKEASSSNINEVGSSTNEVGSSINEIGSSDENIQAELGR 1074
Query: 613 LR 614
R
Sbjct: 1075 NR 1076
Score = 49 (22.3 bits), Expect = 3.3e-07, Sum P(4) = 3.3e-07
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 566 SKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQC 625
S D +GE+ GC S + ++ G+ SDI ++ Q ++ + +A
Sbjct: 1360 SMDSNLGEAA--SGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEAV 1417
Query: 626 SFCHSSENSEA 636
H S+ S +
Sbjct: 1418 LEQHGSQPSNS 1428
Score = 47 (21.6 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 24/96 (25%), Positives = 35/96 (36%)
Query: 326 GNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSN 385
G +C + C NP +I +K R N T KY S +
Sbjct: 792 GKAKTEPNKCVSQCAAFENPKGLIHG--CSKDNR--NDTEGFKYPLGHEVNHSRETSIEM 847
Query: 386 EESE---NFVQKQTSISNAK-FSQKSS--NRRGTCA 415
EESE ++Q +S + F+ S+ N CA
Sbjct: 848 EESELDAQYLQNTFKVSKRQSFAPFSNPGNAEEECA 883
Score = 42 (19.8 bits), Expect = 6.0e-06, Sum P(4) = 6.0e-06
Identities = 23/103 (22%), Positives = 38/103 (36%)
Query: 316 GNATCVIFEQGNGN-ENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDT 374
GN T +I +G +N R L P + + L + + + + +++
Sbjct: 960 GNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNE-- 1017
Query: 375 NKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAE 417
N ST S V K+ S SN S+N G+ E
Sbjct: 1018 NIPSTVSTISRNNIRENVFKEASSSNINEVGSSTNEVGSSINE 1060
Score = 39 (18.8 bits), Expect = 3.3e-07, Sum P(4) = 3.3e-07
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 491 EVNVLENVSVVQKKTYKDTVP 511
++N + + V+Q + YK ++P
Sbjct: 1079 KLNAMLRLGVLQPEVYKQSLP 1099
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNK------GSTTPATS--NEESENFVQ 393
NT ++ N LN ++A +KY + G+ T A+S +E S +
Sbjct: 235 NTE-HHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLT 293
Query: 394 K-QTSISNAKFSQKS 407
K + ++ A+F KS
Sbjct: 294 KDRMNVEKAEFCNKS 308
Score = 37 (18.1 bits), Expect = 4.8e-06, Sum P(4) = 4.8e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 564 GISKDGLVGESKVQEGCSSTANET 587
G + G E+ V E CS ++++
Sbjct: 1366 GEAASGCESETSVSEDCSGLSSQS 1389
>UNIPROTKB|Q5D7I9 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:54133 "Pygathrix nemaeus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY843508 ProteinModelPortal:Q5D7I9
SMR:Q5D7I9 Uniprot:Q5D7I9
Length = 495
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 ENIRPNRHVANIVEKLREVKLS 87
>UNIPROTKB|Q5D7J0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:33548 "Colobus guereza" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY843507 EMBL:AY710298
ProteinModelPortal:Q5D7J0 SMR:Q5D7J0 Uniprot:Q5D7J0
Length = 495
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 ENIRPNRHVANIVEKLREVKLS 87
>UNIPROTKB|Q6J6J0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9600 "Pongo pygmaeus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 HOGENOM:HOG000230969 HOVERGEN:HBG050730
InterPro:IPR025994 Pfam:PF12820 EMBL:AY589040 EMBL:AF019077
ProteinModelPortal:Q6J6J0 SMR:Q6J6J0 STRING:Q6J6J0
InParanoid:Q6J6J0 Uniprot:Q6J6J0
Length = 1863
Score = 159 (61.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 63/250 (25%), Positives = 116/250 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS----VYKSMEVASGINI-----FVTQDESSTKSSGDLICGEQVTGGCQDK 115
+ LV + + ++ +G+ F ++ +S + D + Q + G +++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLQYANSYNFAKKENNSPEHLKDEVSIIQ-SMGYRNR 133
Query: 116 VEH--QGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEG 172
+ Q + + TS + + GTV T TK+R+Q P+ + +L
Sbjct: 134 AKRLLQSEPENPSLQETSPSVQLSNLGTVRT---LRTKQRIQ------PQKKSVYIELGS 184
Query: 173 GTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDV 232
+ ++T + SV +E I +GT S L + ++ + + +ETD T
Sbjct: 185 DSSEDTVNKATYCSVGDQELLQITPQGT--SDEISL--DSAKKAACEFSETDVTNTEHHQ 240
Query: 233 PSFSDLKDSE 242
PS +DL +E
Sbjct: 241 PSNNDLNTTE 250
Score = 57 (25.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 32/151 (21%), Positives = 58/151 (38%)
Query: 373 DTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEI 432
D+N G A S ESE V + S +++ ++ +R T I A + +
Sbjct: 1362 DSNLGE---AASGYESETSVSEDCSGLSSQSDILTTQQRDTMQDNLIKLQQEMAELEA-V 1417
Query: 433 VDQHGKNIGSDLPTSLGKKQGSDEDLHF--MKTRKKCWKINSQTEEDFCTKSKRRKVDST 490
++QHG + P+ + EDL T +K + SQ ++ + +
Sbjct: 1418 LEQHGSQPSNSYPSIISDSSAL-EDLRNPEQSTSEKA-VLTSQKSSEYPISQNPEGLSAD 1475
Query: 491 EVNVLENVSVVQKKTYKDTVPQPSLIPTFED 521
+ V + S + K PS P+ +D
Sbjct: 1476 KFEVSADSSTNKNKEPGVERSSPSKCPSLDD 1506
Score = 57 (25.1 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 16/69 (23%), Positives = 36/69 (52%)
Query: 744 SNLPNENPGSQESRKKCISKKLLTQHNKVAFKSDISTNSWQSWENKLVLCCSALT--VGE 801
SN+P+++ +C+SK T+ N ++ K NS + N+++L ++ + E
Sbjct: 1235 SNIPSQSTRHSTVATECLSKN--TEENLLSLK-----NSLNDYSNQVILVKASQEHHLSE 1287
Query: 802 QVYCTDTIF 810
+ C+ ++F
Sbjct: 1288 ETKCSASLF 1296
Score = 50 (22.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 41/178 (23%), Positives = 73/178 (41%)
Query: 237 DLKDSEDISSSELSPTAEVHGKSDGLD-FFESEIFEWTQRACSPELLPSPAKTQVADAEE 295
+ K S + SS+ S ++ ++ D FF + ++ S + S K V+D EE
Sbjct: 1288 ETKCSASLFSSQCSELEDLTANTNTQDRFFIGSSKQMRHQSESQGVGLSD-KELVSDDEE 1346
Query: 296 NGKGLEA---ALQG--SNTVVDISNGNATCVIFEQGNGNENEGRCKALCPRNTNPNNMIE 350
G LE QG SN S + + E +G ++ R+T +N+I
Sbjct: 1347 RGTDLEENNQEEQGVDSNLGEAASGYESETSVSEDCSGLSSQSDILTTQQRDTMQDNLI- 1405
Query: 351 NGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSS 408
KL ++ + + ++ ++ + S +S E ++ TS SQKSS
Sbjct: 1406 --KLQQEMAELEAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKAVLTSQKSS 1461
Score = 48 (22.0 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 555 NKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS--DIGVLEKLHKTQRGA 612
N+ + ++ S IS++ + E+ +E SS NE S GSS ++G ++ + + G
Sbjct: 1016 NENIPSTVSIISRNN-IRENVFKEASSSNINEVGSSTNEVGSSINEVGSSDENIQAELGR 1074
Query: 613 LR 614
R
Sbjct: 1075 SR 1076
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 22/103 (21%), Positives = 38/103 (36%)
Query: 316 GNATCVIFEQGNG-NENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDT 374
GN T +I +G ++N L P + + L + + + + +++
Sbjct: 960 GNETGLITPNKHGLSQNPYHIPPLFPIKSFVKTKCKKNLLEENSEEHSMSPEREMGNE-- 1017
Query: 375 NKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAE 417
N ST S V K+ S SN S+N G+ E
Sbjct: 1018 NIPSTVSIISRNNIRENVFKEASSSNINEVGSSTNEVGSSINE 1060
Score = 41 (19.5 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 23/84 (27%), Positives = 33/84 (39%)
Query: 326 GNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAK-RDTNKGSTTPATS 384
G +C + C NP +I +G K R N T KY + N T +
Sbjct: 792 GKAKTEPNKCVSQCAAFENPKELI-HGCF-KDTR--NDTEGFKYPLGHEVNHSQET-SIE 846
Query: 385 NEESENFVQKQTSISNAKFSQKSS 408
EESE + Q + K S++ S
Sbjct: 847 MEESE--LDTQYLQNTFKVSKRQS 868
Score = 39 (18.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 49/304 (16%), Positives = 109/304 (35%)
Query: 296 NGKGLEAALQGSNTVVDISNGN-ATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKL 354
NGK E Q V+ N + + C+I + +C + PN+++++G++
Sbjct: 1102 NGKHPEIKKQEYEEVLQTVNTDFSPCLISDNLEQPMRSSHASQVC--SETPNDLLDDGEI 1159
Query: 355 NKKGR------KANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSS 408
+ K +S K +R S +P T ++ + + + +++ + S
Sbjct: 1160 KEDTSFAENDIKESSAVFSKSVQRGELSRSPSPFTHTHLAQGYRRGAKKLESSEENLSSE 1219
Query: 409 NRRGTCAAEPIPDNVLAASVRTEIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCW 468
+ C ++L V + I Q ++ S + T K ++E+L +K
Sbjct: 1220 DEELPCF-----QHLLFGKV-SNIPSQSTRH--STVATECLSKN-TEENLLSLKN----- 1265
Query: 469 KINSQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPTFEDADKKEXX 528
+N + + K+ + S E ++ Q +D + F K+
Sbjct: 1266 SLNDYSNQVILVKASQEHHLSEETKCSASLFSSQCSELEDLTANTNTQDRFFIGSSKQMR 1325
Query: 529 XXXXXXXXXXXXXXXXXXXCDK--ELQWNKRMKASFS---GISKDGLVGESKVQEGCSST 583
++ +L+ N + + G + G E+ V E CS
Sbjct: 1326 HQSESQGVGLSDKELVSDDEERGTDLEENNQEEQGVDSNLGEAASGYESETSVSEDCSGL 1385
Query: 584 ANET 587
++++
Sbjct: 1386 SSQS 1389
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 470 INSQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVP 511
IN D +++ + ++N + + V+Q + YK + P
Sbjct: 1058 INEVGSSDENIQAELGRSRGPKLNAMLRLGVLQPEVYKQSFP 1099
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 682 NLEAELARSR 691
N++AEL RSR
Sbjct: 1067 NIQAELGRSR 1076
>UNIPROTKB|Q3MJK3 [details] [associations]
symbol:TRIM5 "Tripartite motif protein TRIM5" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ eggNOG:NOG253216 KO:K10648
IPI:IPI00838178 EMBL:DAAA02040905 EMBL:AY970972 EMBL:DQ381151
RefSeq:NP_001029970.1 UniGene:Bt.107577 SMR:Q3MJK3
Ensembl:ENSBTAT00000005971 GeneID:616948 KEGG:bta:616948
InParanoid:Q3MJK3 OMA:KEERTSW NextBio:20900407 Uniprot:Q3MJK3
Length = 498
Score = 147 (56.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI + K +CPVC+V +
Sbjct: 6 LMNIQEEVTCPICLELLTEPLSLDCGHSFCQACITANNKESIIGQEGKRSCPVCRVSFEP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGD---LIC---GEQVTGGCQD 114
+R H+ N+V + ++V+ + Q+ + G+ L C G+ + C+
Sbjct: 66 GNLRPNRHVANIVQRLREVKVSPEVE----QERNLCAHHGEKLQLFCEQDGKVICWLCER 121
Query: 115 KVEHQ 119
EH+
Sbjct: 122 SQEHR 126
Score = 55 (24.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 431 EIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTE-EDFCTK--SKRRKV 487
EI ++ K + S L GKKQ ++E ++ WKI + E ++ K R+ +
Sbjct: 135 EIAPEYQKKLQSCLQRLKGKKQEAEELEIKVREEMSTWKIQIENEIQNVQGKFTQLRQIL 194
Query: 488 DSTEVNVLENV 498
DS E+ L +
Sbjct: 195 DSEEMKELRKL 205
>UNIPROTKB|Q5D7J2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9555 "Papio anubis" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 CTD:85363 EMBL:AY843505
RefSeq:NP_001106102.1 UniGene:Pan.11156 ProteinModelPortal:Q5D7J2
SMR:Q5D7J2 GeneID:100126714 Uniprot:Q5D7J2
Length = 497
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y I+
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHRKSMLYKEGERSCPVCRISYQPENIQPN 71
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLI-CGEQ---VTGGCQDKVEHQG 120
H+ N+V + ++++ + V D + L+ C E + C+ EH+G
Sbjct: 72 RHVANIVEKLREVKLSPEEGLKV--DHCARHGEKLLLFCQEDSKVICWLCERSQEHRG 127
>UNIPROTKB|P38398 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0046600 "negative regulation of centriole
replication" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0015631 "tubulin binding" evidence=NAS]
[GO:0008274 "gamma-tubulin ring complex" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=NAS;TAS] [GO:0006978 "DNA
damage response, signal transduction by p53 class mediator
resulting in transcription of p21 class mediator" evidence=TAS]
[GO:0006359 "regulation of transcription from RNA polymerase III
promoter" evidence=TAS] [GO:0042127 "regulation of cell
proliferation" evidence=TAS] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=NAS] [GO:0050681 "androgen receptor binding"
evidence=NAS] [GO:0000151 "ubiquitin ligase complex" evidence=NAS]
[GO:0031436 "BRCA1-BARD1 complex" evidence=IDA] [GO:0045739
"positive regulation of DNA repair" evidence=IMP] [GO:0031572 "G2
DNA damage checkpoint" evidence=IMP] [GO:0010212 "response to
ionizing radiation" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=IMP;TAS] [GO:0070531 "BRCA1-A complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=IMP] [GO:0030521
"androgen receptor signaling pathway" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0071681
"cellular response to indole-3-methanol" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0085020 "protein
K6-linked ubiquitination" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006974 "response to DNA damage stimulus" evidence=TAS]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IDA;TAS] [GO:0006301 "postreplication
repair" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0031941 "filamentous actin"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0001726 "ruffle" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] [GO:2000145 "regulation of cell motility"
evidence=IDA] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0035066 "positive regulation of
histone acetylation" evidence=IDA] [GO:0051571 "positive regulation
of histone H3-K4 methylation" evidence=IDA] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=IDA] [GO:0070512
"positive regulation of histone H4-K20 methylation" evidence=IDA]
[GO:2000617 "positive regulation of histone H3-K9 acetylation"
evidence=IDA] [GO:2000620 "positive regulation of histone H4-K16
acetylation" evidence=IDA] Reactome:REACT_216 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00097 Pfam:PF00533 Prosite:PS00518
GO:GO:0005886 GO:GO:0045892 GO:GO:0005694 Reactome:REACT_115566
GO:GO:0008630 GO:GO:0007059 GO:GO:0005654 GO:GO:0030521
GO:GO:0071158 Pathway_Interaction_DB:aurora_a_pathway Orphanet:1331
GO:GO:0046872 GO:GO:0008270 Pathway_Interaction_DB:hnf3apathway
GO:GO:0045944 GO:GO:0006633 GO:GO:0003723 GO:GO:0010212
GO:GO:0042127 GO:GO:0044212 GO:GO:0007049 GO:GO:2000145
GO:GO:0003713 PDB:3COJ PDBsum:3COJ GO:GO:0045717
Reactome:REACT_111183 GO:GO:0030529 GO:GO:0001726 GO:GO:0043627
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000724 GO:GO:0031398
GO:GO:0004842 GO:GO:0034446 MIM:114480
Pathway_Interaction_DB:ar_pathway GO:GO:0015631 GO:GO:0050681
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0045739
InterPro:IPR017907 GO:GO:0051865
Pathway_Interaction_DB:bard1pathway GO:GO:0031572 GO:GO:0070531
GO:GO:0031436 PDB:1JM7 PDBsum:1JM7 Orphanet:145 GO:GO:0085020
GO:GO:0006301 eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672
HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C
InterPro:IPR025994 Pfam:PF12820 EMBL:U14680 EMBL:L78833 EMBL:U64805
EMBL:AF005068 EMBL:DQ190450 EMBL:DQ190451 EMBL:DQ190452
EMBL:DQ190453 EMBL:DQ190454 EMBL:DQ190455 EMBL:DQ190456
EMBL:AY273801 EMBL:AC060780 EMBL:AC135721 EMBL:BC072418
IPI:IPI00027272 IPI:IPI00027277 IPI:IPI00185298 IPI:IPI00218982
IPI:IPI00909467 IPI:IPI00945705 PIR:A58881 RefSeq:NP_009225.1
RefSeq:NP_009228.2 RefSeq:NP_009229.2 RefSeq:NP_009230.2
RefSeq:NP_009231.2 UniGene:Hs.194143 PDB:1JNX PDB:1N5O PDB:1OQA
PDB:1T15 PDB:1T29 PDB:1T2U PDB:1T2V PDB:1Y98 PDB:2ING PDB:3K0H
PDB:3K0K PDB:3K15 PDB:3K16 PDB:3PXA PDB:3PXB PDB:3PXC PDB:3PXD
PDB:3PXE PDBsum:1JNX PDBsum:1N5O PDBsum:1OQA PDBsum:1T15
PDBsum:1T29 PDBsum:1T2U PDBsum:1T2V PDBsum:1Y98 PDBsum:2ING
PDBsum:3K0H PDBsum:3K0K PDBsum:3K15 PDBsum:3K16 PDBsum:3PXA
PDBsum:3PXB PDBsum:3PXC PDBsum:3PXD PDBsum:3PXE DisProt:DP00238
ProteinModelPortal:P38398 SMR:P38398 DIP:DIP-5971N IntAct:P38398
MINT:MINT-90433 STRING:P38398 PhosphoSite:P38398 DMDM:728984
PaxDb:P38398 PRIDE:P38398 DNASU:672 Ensembl:ENST00000352993
Ensembl:ENST00000357654 Ensembl:ENST00000468300 GeneID:672
KEGG:hsa:672 UCSC:uc002icp.4 UCSC:uc002icq.3 UCSC:uc010whl.2
GeneCards:GC17M041197 HGNC:HGNC:1100 HPA:CAB001946 HPA:CAB018369
HPA:HPA034966 MIM:113705 MIM:167000 MIM:604370 MIM:614320
neXtProt:NX_P38398 Orphanet:1333 Orphanet:168829 PharmGKB:PA25411
InParanoid:P38398 BindingDB:P38398 ChEMBL:CHEMBL5990 ChiTaRS:BRCA1
EvolutionaryTrace:P38398 GenomeRNAi:672 NextBio:2752
PMAP-CutDB:P38398 ArrayExpress:P38398 Bgee:P38398 CleanEx:HS_BRCA1
Genevestigator:P38398 GermOnline:ENSG00000012048 GO:GO:0008274
GO:GO:0071681 GO:GO:0006978 GO:GO:0046600 GO:GO:0051573
GO:GO:0051571 GO:GO:2000617 GO:GO:2000620 GO:GO:0070512
GO:GO:0006359 Uniprot:P38398
Length = 1863
Score = 158 (60.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 68/255 (26%), Positives = 118/255 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEH--QGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLE 171
+ + Q + + TS + + GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLQETSLSVQLSNLGTVRT---LRTKQRIQ------PQKTSVYIELG 183
Query: 172 GGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYI 227
+ ++T + SV +E I +GT RDE + +K++ + +ETD
Sbjct: 184 SDSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTN 235
Query: 228 TPPDVPSFSDLKDSE 242
T PS +DL +E
Sbjct: 236 TEHHQPSNNDLNTTE 250
Score = 56 (24.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 287 KTQVADAEENGKGLEAALQGSNTVVDISNGNAT--CV----IFEQGNGNENEGRCKALCP 340
K V+D EE G GLE Q ++ D + G A C + E +G ++
Sbjct: 1338 KELVSDDEERGTGLEENNQEEQSM-DSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQ 1396
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISN 400
R+T +N+I KL ++ + + ++ ++ + S +S E ++ TS
Sbjct: 1397 RDTMQHNLI---KLQQEMAELEAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKA 1453
Query: 401 AKFSQKSS 408
SQKSS
Sbjct: 1454 VLTSQKSS 1461
Score = 56 (24.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 32/151 (21%), Positives = 58/151 (38%)
Query: 373 DTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEI 432
D+N G A S ESE V + S +++ ++ +R T I A + +
Sbjct: 1362 DSNLGE---AASGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEA-V 1417
Query: 433 VDQHGKNIGSDLPTSLGKKQGSDEDLHF--MKTRKKCWKINSQTEEDFCTKSKRRKVDST 490
++QHG + P+ + EDL T +K + SQ ++ + +
Sbjct: 1418 LEQHGSQPSNSYPSIISDSSAL-EDLRNPEQSTSEKA-VLTSQKSSEYPISQNPEGLSAD 1475
Query: 491 EVNVLENVSVVQKKTYKDTVPQPSLIPTFED 521
+ V + S + K PS P+ +D
Sbjct: 1476 KFEVSADSSTSKNKEPGVERSSPSKCPSLDD 1506
Score = 55 (24.4 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 351 NGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFV---QKQTSISNAKFSQKS 407
+G L K+ K ++K + N+ + P + + F QK + NAK S K
Sbjct: 889 SGSLKKQSPKVTFECEQKEENQGKNESNIKPVQTVNITAGFPVVGQKDKPVDNAKCSIKG 948
Query: 408 SNR 410
+R
Sbjct: 949 GSR 951
Score = 50 (22.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 555 NKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS--DIGVLEKLHKTQRGA 612
N+ + ++ S IS++ + E+ +E SS NE S GSS +IG ++ + + G
Sbjct: 1016 NENIPSTVSTISRNN-IRENVFKEASSSNINEVGSSTNEVGSSINEIGSSDENIQAELGR 1074
Query: 613 LR 614
R
Sbjct: 1075 NR 1076
Score = 49 (22.3 bits), Expect = 5.8e-07, Sum P(4) = 5.8e-07
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 566 SKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQC 625
S D +GE+ GC S + ++ G+ SDI ++ Q ++ + +A
Sbjct: 1360 SMDSNLGEAA--SGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEAV 1417
Query: 626 SFCHSSENSEA 636
H S+ S +
Sbjct: 1418 LEQHGSQPSNS 1428
Score = 47 (21.6 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 24/96 (25%), Positives = 35/96 (36%)
Query: 326 GNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSN 385
G +C + C NP +I +K R N T KY S +
Sbjct: 792 GKAKTEPNKCVSQCAAFENPKGLIHG--CSKDNR--NDTEGFKYPLGHEVNHSRETSIEM 847
Query: 386 EESE---NFVQKQTSISNAK-FSQKSS--NRRGTCA 415
EESE ++Q +S + F+ S+ N CA
Sbjct: 848 EESELDAQYLQNTFKVSKRQSFAPFSNPGNAEEECA 883
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 23/103 (22%), Positives = 38/103 (36%)
Query: 316 GNATCVIFEQGNGN-ENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDT 374
GN T +I +G +N R L P + + L + + + + +++
Sbjct: 960 GNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNE-- 1017
Query: 375 NKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAE 417
N ST S V K+ S SN S+N G+ E
Sbjct: 1018 NIPSTVSTISRNNIRENVFKEASSSNINEVGSSTNEVGSSINE 1060
Score = 39 (18.8 bits), Expect = 5.8e-07, Sum P(4) = 5.8e-07
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 491 EVNVLENVSVVQKKTYKDTVP 511
++N + + V+Q + YK ++P
Sbjct: 1079 KLNAMLRLGVLQPEVYKQSLP 1099
Score = 39 (18.8 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNK------GSTTPATS--NEESENFVQ 393
NT ++ N LN ++A +KY + G+ T A+S +E S +
Sbjct: 235 NTE-HHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLT 293
Query: 394 K-QTSISNAKFSQKS 407
K + ++ A+F KS
Sbjct: 294 KDRMNVEKAEFCNKS 308
Score = 37 (18.1 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 564 GISKDGLVGESKVQEGCSSTANET 587
G + G E+ V E CS ++++
Sbjct: 1366 GEAASGCESETSVSEDCSGLSSQS 1389
>UNIPROTKB|Q5D7H8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:230833 "Callicebus donacophilus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843519
ProteinModelPortal:Q5D7H8 SMR:Q5D7H8 Uniprot:Q5D7H8
Length = 494
Score = 151 (58.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 38/126 (30%), Positives = 59/126 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K + +CP+C++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRISYPSE 65
Query: 62 EIRAAPHMDNLVS----VYKSMEVASGINIFVTQDESST---KSSGDLICGEQVTGGCQD 114
+R H+ N+V V S E +++ E + G++IC C+
Sbjct: 66 NLRPNRHLANIVERLREVVLSPEEGQKVDLCARHGEKLLLFCQQDGNVICWL-----CER 120
Query: 115 KVEHQG 120
EH+G
Sbjct: 121 SQEHRG 126
Score = 50 (22.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 18/83 (21%), Positives = 38/83 (45%)
Query: 431 EIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEE-DFCTKSKRRK--V 487
E+ + +N+ L K Q +++ ++ + WKI Q ++ + + K+ + +
Sbjct: 134 EVAQTYRENLQVVLEMMRQKHQDAEKLEADVREEQASWKIQIQNDKTNIMAEFKQLRDIL 193
Query: 488 DSTEVNVLENVSVVQKKTYKDTV 510
D E N L+N+ +K K V
Sbjct: 194 DCEESNELQNLEKEEKNILKRLV 216
>UNIPROTKB|L7N078 [details] [associations]
symbol:TRIM6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA]
GeneTree:ENSGT00690000101646 EMBL:AAEX03012850
Ensembl:ENSCAFT00000010104 Uniprot:L7N078
Length = 562
Score = 158 (60.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 37/117 (31%), Positives = 56/117 (47%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACI-------VKSMKSGSNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ VS+ C H FC ACI V S+CPVC+ Y ++R
Sbjct: 87 EVTCPICLELLTEPVSIDCGHSFCQACIMGNSTELVMGQDGESSCPVCQTSYQPGDLRPN 146
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ N+ + + + G+ + VT + L C G+ + C+ EH+G
Sbjct: 147 RHLANIAERLREVVLGPGMQLKVTLCAHHGEKL-QLFCKEDGKLICWLCERSQEHRG 202
Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 486 KVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
+ + + +L++VS V K++ T+ +P +PT
Sbjct: 315 RCQGSAMELLQDVSDVMKRSEFWTLKKPEALPT 347
>UNIPROTKB|Q2YEM9 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9600 "Pongo pygmaeus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HSSP:Q9CQJ4
HOVERGEN:HBG001357 HOGENOM:HOG000234134 GO:GO:0031664
eggNOG:NOG253216 UniGene:Pab.19510 EMBL:AY899900 EMBL:AY899894
EMBL:AY899895 EMBL:AY899896 EMBL:AY899897 EMBL:AY899898
EMBL:AY899899 EMBL:AY843513 EMBL:AY923179 EMBL:CR857231
EMBL:AY710302 EMBL:DQ437601 ProteinModelPortal:Q2YEM9 SMR:Q2YEM9
STRING:Q2YEM9 Uniprot:Q2YEM9
Length = 493
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K + +CPVC+V Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSTLDKGERSCPVCRVSYQPK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA-SGINIFVTQDESSTKSSGDLI-C---GEQVTGGCQDKV 116
IR H+ N+V + ++++ G + D + L+ C G+ + C+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKV----DHCARHGEKLLLFCKEDGKVICWLCERSQ 121
Query: 117 EHQG 120
EH+G
Sbjct: 122 EHRG 125
>UNIPROTKB|Q5C8T8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9601 "Pongo abelii" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HSSP:Q13049
HOVERGEN:HBG001357 GO:GO:0031664 CTD:85363 KO:K10648 EMBL:AY740618
RefSeq:NP_001124542.1 UniGene:Pab.19510 ProteinModelPortal:Q5C8T8
SMR:Q5C8T8 GeneID:100137088 KEGG:pon:100137088 Uniprot:Q5C8T8
Length = 493
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K + +CPVC+V Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSTLDKGERSCPVCRVSYQPK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA-SGINIFVTQDESSTKSSGDLI-C---GEQVTGGCQDKV 116
IR H+ N+V + ++++ G + D + L+ C G+ + C+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKV----DHCARHGEKLLLFCKEDGKVICWLCERSQ 121
Query: 117 EHQG 120
EH+G
Sbjct: 122 EHRG 125
>UNIPROTKB|Q9GKK8 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9598 "Pan troglodytes" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005694 "chromosome" evidence=ISS] [GO:0006359 "regulation of
transcription from RNA polymerase III promoter" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006978 "DNA
damage response, signal transduction by p53 class mediator
resulting in transcription of p21 class mediator" evidence=TAS]
[GO:0008274 "gamma-tubulin ring complex" evidence=NAS] [GO:0015631
"tubulin binding" evidence=NAS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=TAS] [GO:0042981 "regulation of apoptotic process"
evidence=TAS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0046600 "negative regulation of centriole replication"
evidence=NAS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0085020 "protein K6-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0006915
GO:GO:0005694 GO:GO:0045893 GO:GO:0042981 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0006633
GO:GO:0042127 GO:GO:0007049 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0015631
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0045739
InterPro:IPR017907 GO:GO:0051865 GO:GO:0031436 GO:GO:0085020
eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969
HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994
Pfam:PF12820 GO:GO:0008274 GO:GO:0006978 GO:GO:0046600
GO:GO:0006359 EMBL:AF207822 EMBL:AY365046 EMBL:AF019075
RefSeq:NP_001038958.1 UniGene:Ptr.6298 ProteinModelPortal:Q9GKK8
SMR:Q9GKK8 STRING:Q9GKK8 GeneID:449497 KEGG:ptr:449497
InParanoid:Q9GKK8 NextBio:20832624 Uniprot:Q9GKK8
Length = 1863
Score = 158 (60.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 68/255 (26%), Positives = 118/255 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEH--QGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLE 171
+ + Q + + TS + + GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLQETSLSVQLSNLGTVRT---LRTKQRIQ------PQKKSVYIELG 183
Query: 172 GGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYI 227
+ ++T + SV +E I +GT RDE + +K++ + +ETD
Sbjct: 184 SDSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTN 235
Query: 228 TPPDVPSFSDLKDSE 242
T PS +DL +E
Sbjct: 236 TEHHQPSNNDLNTTE 250
Score = 56 (24.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 287 KTQVADAEENGKGLEAALQGSNTVVDISNGNAT--CV----IFEQGNGNENEGRCKALCP 340
K V+D EE G GLE Q ++ D + G A C + E +G ++
Sbjct: 1338 KELVSDDEERGTGLEENNQEEQSM-DSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQ 1396
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISN 400
R+T +N+I KL ++ + + ++ ++ + S +S E ++ TS
Sbjct: 1397 RDTMQDNLI---KLQQEMAELEAVLEQHGSQPSNSYPSIISDSSALEDLQNPEQSTSEKA 1453
Query: 401 AKFSQKSS 408
SQKSS
Sbjct: 1454 VLTSQKSS 1461
Score = 56 (24.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 32/151 (21%), Positives = 58/151 (38%)
Query: 373 DTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEI 432
D+N G A S ESE V + S +++ ++ +R T I A + +
Sbjct: 1362 DSNLGE---AASGCESETSVSEDCSGLSSQSDILTTQQRDTMQDNLIKLQQEMAELEA-V 1417
Query: 433 VDQHGKNIGSDLPTSLGKKQGSDEDLHF--MKTRKKCWKINSQTEEDFCTKSKRRKVDST 490
++QHG + P+ + EDL T +K + SQ ++ + +
Sbjct: 1418 LEQHGSQPSNSYPSIISDSSAL-EDLQNPEQSTSEKA-VLTSQKSSEYPISQNPEGLSAD 1475
Query: 491 EVNVLENVSVVQKKTYKDTVPQPSLIPTFED 521
+ V + S + K PS P+ +D
Sbjct: 1476 KFEVSADSSTSKNKEPGVERSSPSKCPSLDD 1506
Score = 54 (24.1 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 744 SNLPNENPGSQESRKKCISKKLLTQHNKVAFKSDISTNSWQSWENKLVLCCSALT--VGE 801
SN+P+++ +C+SK T+ N ++ K NS N+++L ++ + E
Sbjct: 1235 SNIPSQSTRHSTVATECLSKN--TEENLLSLK-----NSLNDCSNQVILAKASQEHHLSE 1287
Query: 802 QVYCTDTIF 810
+ C+ ++F
Sbjct: 1288 ETKCSASLF 1296
Score = 49 (22.3 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 555 NKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS--DIGVLEKLHKTQRGA 612
N+ + ++ S IS++ + E+ +E SS NE S GSS ++G ++ + + G
Sbjct: 1016 NENIPSTVSTISRNN-IRENVFKEASSSNINEVGSSTNEVGSSINEVGSSDENIQAELGR 1074
Query: 613 LR 614
R
Sbjct: 1075 NR 1076
Score = 47 (21.6 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 566 SKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQC 625
S D +GE+ GC S + ++ G+ SDI ++ Q ++ + +A
Sbjct: 1360 SMDSNLGEAA--SGCESETSVSEDCSGLSSQSDILTTQQRDTMQDNLIKLQQEMAELEAV 1417
Query: 626 SFCHSSENSEA 636
H S+ S +
Sbjct: 1418 LEQHGSQPSNS 1428
Score = 43 (20.2 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 21/83 (25%), Positives = 30/83 (36%)
Query: 326 GNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSN 385
G +C + C NP +I +K R N T KY S +
Sbjct: 792 GKAKTEPNKCVSQCAAFENPKGLIHG--CSKDTR--NDTEGFKYPLGHEVNHSRETSIEM 847
Query: 386 EESENFVQKQTSISNAKFSQKSS 408
EESE + Q + K S++ S
Sbjct: 848 EESE--LDAQYLQNTFKVSKRQS 868
Score = 41 (19.5 bits), Expect = 4.7e-07, Sum P(4) = 4.7e-07
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNK------GSTTPATS--NEESENFVQ 393
NT ++ N LN ++A +KY + G+ T A+S +E S +
Sbjct: 235 NTE-HHQPSNNDLNTTEKRATERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLT 293
Query: 394 K-QTSISNAKFSQKS 407
K + ++ A+F KS
Sbjct: 294 KDRMNVEKAEFCNKS 308
Score = 39 (18.8 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 491 EVNVLENVSVVQKKTYKDTVP 511
++N + + V+Q + YK ++P
Sbjct: 1079 KLNAMLRLGVLQPEVYKQSLP 1099
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 54/305 (17%), Positives = 111/305 (36%)
Query: 296 NGKGLEAALQGSNTVVDISNGN-ATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKL 354
N K E Q VV N + + C+I + +C + P++++++G++
Sbjct: 1102 NCKHPEIKKQEYEEVVQTVNTDFSPCLISDNLEQPMGSSHASQVC--SETPDDLLDDGEI 1159
Query: 355 NKKGR------KANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSS 408
+ K +S K +R S +P T ++ + + + +++ + S
Sbjct: 1160 KEDTSFAENDIKESSAVFSKSVQRGELSRSPSPFTHTHLAQGYRRGAKKLESSEENLSSE 1219
Query: 409 NRRGTCAAEPI---PDNVLAASVRTEIVDQH--GKNIGSDLPTSLGKKQGSDEDLHFMKT 463
+ C + N+ + S R V KN +L SL + S D
Sbjct: 1220 DEELPCFQHLLFGKVSNIPSQSTRHSTVATECLSKNTEENL-LSL---KNSLNDCSNQVI 1275
Query: 464 RKKCWKINSQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPTFEDA- 522
K + + +EE C+ S + S++ + LE++ T P LI + +
Sbjct: 1276 LAKASQEHHLSEETKCSAS----LFSSQCSELEDL------TANTNTQDPFLIGSSKQMR 1325
Query: 523 DKKEXXXXXXXXXXXXXXXXXXXXXCDKELQWNKRMKASFSGISKDGLVGESKVQEGCSS 582
+ E ++ Q + M ++ G + G E+ V E CS
Sbjct: 1326 HQSESQGVGLSDKELVSDDEERGTGLEENNQEEQSMDSNL-GEAASGCESETSVSEDCSG 1384
Query: 583 TANET 587
++++
Sbjct: 1385 LSSQS 1389
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 22/103 (21%), Positives = 37/103 (35%)
Query: 316 GNATCVIFEQGNGN-ENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDT 374
GN T +I +G +N L P + + L + + + + +++
Sbjct: 960 GNETGLITPNKHGLLQNPYHIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNE-- 1017
Query: 375 NKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAE 417
N ST S V K+ S SN S+N G+ E
Sbjct: 1018 NIPSTVSTISRNNIRENVFKEASSSNINEVGSSTNEVGSSINE 1060
>UNIPROTKB|Q5BN31 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:39432 "Saimiri boliviensis boliviensis" [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0002218
"activation of innate immune response" evidence=ISS] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0008329 "pattern recognition receptor activity" evidence=ISS]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740614 EMBL:AY928202
ProteinModelPortal:Q5BN31 SMR:Q5BN31 PRIDE:Q5BN31 Uniprot:Q5BN31
Length = 494
Score = 145 (56.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K +CP+C++PY
Sbjct: 6 LGSIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSE 65
Query: 62 EIRAAPHMDNLV 73
+R H+ ++V
Sbjct: 66 NLRPNRHLASIV 77
Score = 55 (24.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 18/83 (21%), Positives = 40/83 (48%)
Query: 431 EIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEE-DFCTKSKRRK--V 487
E+ ++ + + L T K+Q +++ ++ + WKI Q ++ + + K+ + +
Sbjct: 134 EVAQKYREKLQVALETMRQKQQDAEKLEADVRQEQASWKIQIQNDKTNIMAEFKQLRDIL 193
Query: 488 DSTEVNVLENVSVVQKKTYKDTV 510
D E N L+N+ +K K V
Sbjct: 194 DCEESNELQNLEKEEKNILKRLV 216
>UNIPROTKB|Q5D7I0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9521 "Saimiri sciureus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843517
ProteinModelPortal:Q5D7I0 SMR:Q5D7I0 Uniprot:Q5D7I0
Length = 494
Score = 145 (56.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K +CP+C++PY
Sbjct: 6 LGSIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSE 65
Query: 62 EIRAAPHMDNLV 73
+R H+ ++V
Sbjct: 66 NLRPNRHLASIV 77
Score = 55 (24.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 18/83 (21%), Positives = 40/83 (48%)
Query: 431 EIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEE-DFCTKSKRRK--V 487
E+ ++ + + L T K+Q +++ ++ + WKI Q ++ + + K+ + +
Sbjct: 134 EVAQKYREKLQVALETMRQKQQDAEKLEADVRQEQASWKIQIQNDKTNIMAEFKQLRDIL 193
Query: 488 DSTEVNVLENVSVVQKKTYKDTV 510
D E N L+N+ +K K V
Sbjct: 194 DCEESNELQNLEKEEKNILKRLV 216
>UNIPROTKB|A6NLP3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005794 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407 EMBL:AC015691
EMBL:AC025016 EMBL:AC131574 HOVERGEN:HBG001357 HOGENOM:HOG000234134
HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341 IPI:IPI00394971
ProteinModelPortal:A6NLP3 SMR:A6NLP3 IntAct:A6NLP3 STRING:A6NLP3
PRIDE:A6NLP3 Ensembl:ENST00000305836 ArrayExpress:A6NLP3
Bgee:A6NLP3 Uniprot:A6NLP3
Length = 493
Score = 161 (61.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA-SGINIFVTQDESSTKSSGDLI-C---GEQVTGGCQDKV 116
IR H+ N+V + ++++ G + D + L+ C G+ + C+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKV----DHCARHGEKLLLFCQEDGKVICWLCERSQ 121
Query: 117 EHQG 120
EH+G
Sbjct: 122 EHRG 125
Score = 38 (18.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 209 RDEEDREKSSQHTETDAYITPPDVPSF-SDLKDSEDISSSELSPTAEVHGK---SDGLDF 264
++EED KS ++ET+ + SDL+ S EL +V GK ++ +
Sbjct: 205 KEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQGSVMEL--LQKVSGKILRTENVTL 262
Query: 265 FESEIFEWTQRAC--SPEL 281
+ E F QR +P+L
Sbjct: 263 KKPETFPKNQRRVFRAPDL 281
>UNIPROTKB|C9JWC5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00657693 ProteinModelPortal:C9JWC5 SMR:C9JWC5 STRING:C9JWC5
Ensembl:ENST00000454828 UCSC:uc009yet.2 ArrayExpress:C9JWC5
Bgee:C9JWC5 Uniprot:C9JWC5
Length = 305
Score = 150 (57.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 13 RELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHRREIRA 65
+E+ CPICL LL+ +SL C H FC ACI +K S+CPVC+ + +R
Sbjct: 11 KEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRP 70
Query: 66 APHMDNLVSVYKSMEVA--SGINIFVTQDESST-----KSSGDLICGEQVTGGCQDKVEH 118
H+ N+V K ++++ G V + K G +IC C+ EH
Sbjct: 71 NRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWV-----CELSQEH 125
Query: 119 QG 120
QG
Sbjct: 126 QG 127
Score = 41 (19.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 485 RKVDSTEVNVLENVSVVQKKTYKDTVPQPSLI 516
+K++ EVNVL+N++ + + +LI
Sbjct: 171 QKLEEGEVNVLDNLAAATDQLVQQRQDASTLI 202
>UNIPROTKB|Q2YEM8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:61851 "Hoolock hoolock" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899907 EMBL:AY899901 EMBL:AY899902
EMBL:AY899903 EMBL:AY899904 EMBL:AY899905 EMBL:AY899906
ProteinModelPortal:Q2YEM8 SMR:Q2YEM8 Uniprot:Q2YEM8
Length = 494
Score = 153 (58.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K+ +CPVC++ Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDEGERSCPVCRISYQHK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 NIRPNRHVANIVEKLREVKLS 86
>UNIPROTKB|I3LGG5 [details] [associations]
symbol:LOC100738479 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR000679 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50114 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000032023 Uniprot:I3LGG5
Length = 488
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKS-----MKSG--SNCPVCKVPYHRREIRAA 66
E+ CP+CL LL+ +S+ C H FC ACI ++ M G S+CPVC+ Y +R
Sbjct: 12 EVTCPLCLELLTDPLSIDCGHSFCQACITQNSEEWRMDQGGESSCPVCQTRYRPGNLRPN 71
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ N+ + + + SG + V + L C G+ + C+ EH+G
Sbjct: 72 RHLANIAERLREVVLGSGTQLKVILCAHHGEKL-QLFCREDGQLICWLCERAQEHRG 127
>UNIPROTKB|H3BPZ9 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC138028 HGNC:HGNC:28856 ChiTaRS:RNF166
Ensembl:ENST00000562544 Bgee:H3BPZ9 Uniprot:H3BPZ9
Length = 148
Score = 129 (50.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 33/109 (30%), Positives = 54/109 (49%)
Query: 17 CPICLSLLSSAVSL-TCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAAPHMDNLVS 74
CPICL + V++ +C H FC C+ ++ S CP+C++P+ +++ A H++ +S
Sbjct: 12 CPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKATHVEKQLS 71
Query: 75 VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSK 123
YK+ G N VT + S L EQ+ C V TS+
Sbjct: 72 SYKAP--CRGCNKKVTLAKMRVHISSCLKVQEQMAN-CPKFVPVVPTSQ 117
>UNIPROTKB|Q6J6I8 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9595 "Gorilla gorilla gorilla" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 PANTHER:PTHR13763
HOVERGEN:HBG050730 InterPro:IPR025994 Pfam:PF12820 EMBL:AY589042
EMBL:AF019076 ProteinModelPortal:Q6J6I8 SMR:Q6J6I8 Uniprot:Q6J6I8
Length = 1863
Score = 162 (62.1 bits), Expect = 2.9e-07, Sum P(4) = 2.9e-07
Identities = 70/254 (27%), Positives = 115/254 (45%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTG-GCQ 113
+ LV + K +E A+ N F ++ +S + D + Q TG +
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQSTGYRSR 133
Query: 114 DKVEHQGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEG 172
K Q + + T + V GTV T TK+R+Q P+ + +L
Sbjct: 134 AKRLLQSEPENPSLQETGLSVQVSNLGTVRT---LRTKQRIQ------PQKKSVYIELGS 184
Query: 173 GTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYIT 228
+ ++T + SV +E I +GT RDE + +K++ + +ETD T
Sbjct: 185 DSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTNT 236
Query: 229 PPDVPSFSDLKDSE 242
PS +DL +E
Sbjct: 237 EHHQPSNNDLNTTE 250
Score = 54 (24.1 bits), Expect = 2.9e-07, Sum P(4) = 2.9e-07
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 744 SNLPNENPGSQESRKKCISKKLLTQHNKVAFKSDISTNSWQSWENKLVLCCSALT--VGE 801
SN+P+++ +C+SK T+ N ++ K NS N+++L ++ + E
Sbjct: 1235 SNIPSQSTRHSTVATECLSKN--TEENLLSLK-----NSLNDCSNQVILAKTSQEHHLSE 1287
Query: 802 QVYCTDTIF 810
+ C+ ++F
Sbjct: 1288 ETKCSASLF 1296
Score = 49 (22.3 bits), Expect = 2.9e-07, Sum P(4) = 2.9e-07
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 555 NKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS--DIGVLEKLHKTQRGA 612
N+ + ++ S IS++ + E+ +E SS NE S GSS ++G ++ + + G
Sbjct: 1016 NENIPSTVSTISRNN-IRENVFKEASSSNINEVGSSTNEVGSSINEVGSSDENIQAELGR 1074
Query: 613 LR 614
R
Sbjct: 1075 NR 1076
Score = 47 (21.6 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 566 SKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQC 625
S D +GE+ GC S + ++ G+ SDI ++ Q ++ + +A
Sbjct: 1360 SMDSNLGEAA--SGCESETSVSEDCSGLSSQSDILTTQQRDTMQDNLIKLQQEMAELEAV 1417
Query: 626 SFCHSSENSEA 636
H S+ S +
Sbjct: 1418 LEQHGSQPSNS 1428
Score = 46 (21.3 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 28/104 (26%), Positives = 43/104 (41%)
Query: 570 LVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQCSFCH 629
L GE +Q + + E+ S V G+ D G E + + L K +T HK S C
Sbjct: 752 LSGERVLQ---TERSVESSSISLVPGT-DYGTQESISLLEVSTLGKAKTEPHKC-VSQCA 806
Query: 630 SSENSEASGEMVHYYNGKPVSADYNG-----GSKIIHSHRNCTE 668
+ EN + ++H + K D G G ++ HS E
Sbjct: 807 AFENPKG---LIHGCS-KDTRNDTEGFKYPLGHEVNHSRETSIE 846
Score = 44 (20.5 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 52/305 (17%), Positives = 110/305 (36%)
Query: 296 NGKGLEAALQGSNTVVDISNGN-ATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKL 354
N K E Q VV N + + C+I + +C + P++++++G++
Sbjct: 1102 NCKHPEIKKQEYEEVVQTVNTDFSPCLISDNLEQPMGSSHASQVC--SETPDDLLDDGEI 1159
Query: 355 N------KKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSS 408
K K +S K +R S +P T ++ + + + +++ + S
Sbjct: 1160 KEDTSFAKNDIKESSAVFSKNVQRGELSRSPSPFTHTHLAQGYRRGAKKLESSEENLSSE 1219
Query: 409 NRRGTCAAEPI---PDNVLAASVRTEIVDQH--GKNIGSDLPTSLGKKQGSDEDLHFMKT 463
+ C + N+ + S R V KN +L + + KT
Sbjct: 1220 DEELPCFQHLLFGKVSNIPSQSTRHSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKT 1279
Query: 464 RKKCWKINSQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPTFEDA- 522
++ + +EE C+ S + S++ + LE++ T P LI + +
Sbjct: 1280 SQE----HHLSEETKCSAS----LFSSQCSELEDL------TANTNTQDPFLIGSSKQMR 1325
Query: 523 DKKEXXXXXXXXXXXXXXXXXXXXXCDKELQWNKRMKASFSGISKDGLVGESKVQEGCSS 582
+ E ++ Q + M ++ G + G E+ V E CS
Sbjct: 1326 HQSESQGVGLSDKELVSDDEERGTGLEENNQEEQSMDSNL-GEAASGCESETSVSEDCSG 1384
Query: 583 TANET 587
++++
Sbjct: 1385 LSSQS 1389
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(4) = 2.9e-07
Identities = 11/57 (19%), Positives = 23/57 (40%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSI 398
NT ++ N LN ++A +KY + P +N + + + +S+
Sbjct: 235 NTE-HHQPSNNDLNTTEKRATERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSL 290
Score = 39 (18.8 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 491 EVNVLENVSVVQKKTYKDTVP 511
++N + + V+Q + YK ++P
Sbjct: 1079 KLNAMLRLGVLQPEVYKQSLP 1099
Score = 37 (18.1 bits), Expect = 4.2e-06, Sum P(4) = 4.2e-06
Identities = 22/103 (21%), Positives = 37/103 (35%)
Query: 316 GNATCVIFEQGNGN-ENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDT 374
GN T +I +G +N L P + + L + + + + +++
Sbjct: 960 GNETGLITPNKHGLLQNPYHIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNE-- 1017
Query: 375 NKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAE 417
N ST S V K+ S SN S+N G+ E
Sbjct: 1018 NIPSTVSTISRNNIRENVFKEASSSNINEVGSSTNEVGSSINE 1060
>UNIPROTKB|Q3B891 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
GO:GO:0043009 GO:GO:0009048 GO:GO:0007098 HOGENOM:HOG000142477
HOVERGEN:HBG061757 EMBL:BC106745 IPI:IPI00946108 SMR:Q3B891
STRING:Q3B891 Ensembl:ENST00000494123 Uniprot:Q3B891
Length = 473
Score = 158 (60.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 68/255 (26%), Positives = 118/255 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEH--QGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLE 171
+ + Q + + TS + + GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLQETSLSVQLSNLGTVRT---LRTKQRIQ------PQKTSVYIELG 183
Query: 172 GGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYI 227
+ ++T + SV +E I +GT RDE + +K++ + +ETD
Sbjct: 184 SDSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTN 235
Query: 228 TPPDVPSFSDLKDSE 242
T PS +DL +E
Sbjct: 236 TEHHQPSNNDLNTTE 250
Score = 39 (18.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNK------GSTTPATS--NEESENFVQ 393
NT ++ N LN ++A +KY + G+ T A+S +E S +
Sbjct: 235 NTE-HHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLT 293
Query: 394 K-QTSISNAKFSQKS 407
K + ++ A+F KS
Sbjct: 294 KDRMNVEKAEFCNKS 308
>UNIPROTKB|Q0PF16 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9544 "Macaca mulatta" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0008329 "pattern recognition
receptor activity" evidence=ISS] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=ISS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISS] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISS] [GO:0051607 "defense
response to virus" evidence=TAS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0051607 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932
GO:GO:0004842 GO:GO:0070206 InterPro:IPR017907 GO:GO:0070534
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0008329 InterPro:IPR003879
PRINTS:PR01407 PDB:4B3N PDBsum:4B3N GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 OrthoDB:EOG4229JJ
GO:GO:0031664 CTD:85363 eggNOG:NOG253216 KO:K10648 OMA:WILGVCA
EMBL:AY625001 EMBL:AY899886 EMBL:AY899880 EMBL:AY899881
EMBL:AY899882 EMBL:AY899883 EMBL:AY899884 EMBL:AY899885
EMBL:EF113914 EMBL:AY523632 EMBL:AY523633 EMBL:DQ842020
EMBL:DQ842021 RefSeq:NP_001028082.1 UniGene:Mmu.3751 PDB:2LM3
PDB:3UV9 PDBsum:2LM3 PDBsum:3UV9 ProteinModelPortal:Q0PF16
SMR:Q0PF16 IntAct:Q0PF16 STRING:Q0PF16 Ensembl:ENSMMUT00000000490
GeneID:574288 KEGG:mcc:574288 InParanoid:Q6QWE9 NextBio:19977526
Uniprot:Q0PF16
Length = 497
Score = 151 (58.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y I+
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQPENIQPN 71
Query: 67 PHMDNLVSVYKSMEVA 82
H+ N+V + ++++
Sbjct: 72 RHVANIVEKLREVKLS 87
>UNIPROTKB|Q2YEN2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9551 "Macaca assamensis" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899879 EMBL:AY899873 EMBL:AY899874
EMBL:AY899875 EMBL:AY899876 EMBL:AY899877 EMBL:AY899878
ProteinModelPortal:Q2YEN2 SMR:Q2YEN2 Uniprot:Q2YEN2
Length = 497
Score = 151 (58.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y I+
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQPENIQPN 71
Query: 67 PHMDNLVSVYKSMEVA 82
H+ N+V + ++++
Sbjct: 72 RHVANIVEKLREVKLS 87
>UNIPROTKB|E7ETR2 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_d"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 CTD:672 KO:K10605
EMBL:AC060780 EMBL:AC135721 IPI:IPI00027277 RefSeq:NP_009229.2
UniGene:Hs.194143 GeneID:672 KEGG:hsa:672 HGNC:HGNC:1100
ChiTaRS:BRCA1 GenomeRNAi:672 SMR:E7ETR2 Ensembl:ENST00000491747
Uniprot:E7ETR2
Length = 759
Score = 158 (60.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 68/255 (26%), Positives = 118/255 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEH--QGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLE 171
+ + Q + + TS + + GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLQETSLSVQLSNLGTVRT---LRTKQRIQ------PQKTSVYIELG 183
Query: 172 GGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYI 227
+ ++T + SV +E I +GT RDE + +K++ + +ETD
Sbjct: 184 SDSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTN 235
Query: 228 TPPDVPSFSDLKDSE 242
T PS +DL +E
Sbjct: 236 TEHHQPSNNDLNTTE 250
Score = 44 (20.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 12/64 (18%), Positives = 26/64 (40%)
Query: 573 ESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQCSFCHSSE 632
+ + GC S + ++ G+ SDI ++ Q ++ + +A H S+
Sbjct: 262 QGEAASGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEAVLEQHGSQ 321
Query: 633 NSEA 636
S +
Sbjct: 322 PSNS 325
Score = 42 (19.8 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 556 KRMKASFSGISKDGLVGESKVQEGCSSTANET 587
+R + G + G E+ V E CS ++++
Sbjct: 255 ERHPEKYQGEAASGCESETSVSEDCSGLSSQS 286
>UNIPROTKB|E9PJJ9 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00977425 ProteinModelPortal:E9PJJ9 SMR:E9PJJ9
Ensembl:ENST00000531101 ArrayExpress:E9PJJ9 Bgee:E9PJJ9
Uniprot:E9PJJ9
Length = 187
Score = 134 (52.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 3 DQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV-------KSMKSGSNCPVCK 55
D + +E + E+ CPIC++ L +S+ C H FC++C+ +S G CP+C+
Sbjct: 2 DPTALVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCR 61
Query: 56 VPYHRREIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVT---GGC 112
P R +R + N+V + + + G+ + E + + C E V C
Sbjct: 62 APVQPRNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKL-KMFCKEDVLIMCEAC 120
Query: 113 QDKVEHQGTS 122
EH+ S
Sbjct: 121 SQSPEHEAHS 130
>UNIPROTKB|Q90X96 [details] [associations]
symbol:brca1 "Breast and ovarian cancer susceptibility
protein" species:8355 "Xenopus laevis" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 CTD:672
KO:K10605 InterPro:IPR025994 Pfam:PF12820 HSSP:P38398 EMBL:AF416868
RefSeq:NP_001084248.1 UniGene:Xl.12105 ProteinModelPortal:Q90X96
SMR:Q90X96 IntAct:Q90X96 GeneID:399391 KEGG:xla:399391
Xenbase:XB-GENE-6254021 HOVERGEN:HBG073951 Uniprot:Q90X96
Length = 1579
Score = 155 (59.6 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 72/305 (23%), Positives = 128/305 (41%)
Query: 6 SHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM---KSGS-NCPVCKVPYHRR 61
S + M + L+CPICL L+ V+ C+H+FC C+++ + K G+ CP+CK RR
Sbjct: 13 SVISVMQKNLECPICLELMKEPVATKCDHIFCKFCMLQLLSKKKKGTVPCPLCKTEVTRR 72
Query: 62 EIRAAPHMDNLVS----VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVE 117
++ + LV + K+ E SG F +Q+ TK I E V +
Sbjct: 73 SLQESHRFKLLVEGQLKIIKAFEFDSGYKFFPSQEH--TKGLDSTI--EDVLVKEDQSIV 128
Query: 118 HQGTSKGKRFRRT---SKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGT 174
H KG R R+ ++ T E +G + + + +V + +P +P K
Sbjct: 129 H---CKGYRNRKKGVFNRKTYEETGMLSVSKA-EEQFAKEVTRL-IPCRQKKPKKEAALI 183
Query: 175 VKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPS 234
N + ++ +EN + N SP + +++ + + E+D +
Sbjct: 184 FSNCVPDSSDGDLLNKENGLRND----CSPLHYEKEDTQIPEMEEMVESDLAECEFAESA 239
Query: 235 FSDLKDSEDISS-SELSPTAEVHGKSDGLDFF--ESEIFEWTQRACSPELLPSPAKTQVA 291
S+L + E+S ++ + DF+ ++E F CS K +A
Sbjct: 240 GSNLLGFDGPEGIPEISAETSINAAGN-CDFYGRKTEQFP-NDHHCS-------FKQNIA 290
Query: 292 DAEEN 296
DAE+N
Sbjct: 291 DAEQN 295
Score = 59 (25.8 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 40/180 (22%), Positives = 66/180 (36%)
Query: 279 PELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIFEQ-GNGNENEGRCKA 337
P+ + S A ++ D E A Q +V SN E N E + +
Sbjct: 505 PDCI-SDANLELEDKSEADSNSADACQSD--IVHSSNTQIKQQCVESLANAGETRKKQEL 561
Query: 338 LCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTS 397
C R+ + ++G L K R S Y + + S+ SNE S V KQ
Sbjct: 562 SCERSQEEKDFTQSGALGPKTRSQKSP----YGHSELHIESSQ--ISNEPSN--VTKQVE 613
Query: 398 ISNAK----FSQKSSNRRGTCAAEPIPDNVLAASVRTEIVDQHGKN--IGSDLPTSLGKK 451
+ ++ + N+ + A + + + A + V KN I +P+ L KK
Sbjct: 614 VRRSRRLLMLPKGPGNKSNSNAVKEMNEQENIAQIPEFRVKDTNKNNEISDTVPSQLKKK 673
Score = 42 (19.8 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 564 GISKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLH---KTQRGALRKCETLA 620
GISK L+ + ++ V ++ I E L K +RG+ +
Sbjct: 1253 GISKKSLLTQKELPSQHKQEIRPDLETVNVTPTNPIDAQESLRQSSKNKRGSRMLHNKRS 1312
Query: 621 HKIQCSFCHSSENSEA 636
Q SFC S E +E+
Sbjct: 1313 TSNQGSFCLSVEAAES 1328
Score = 40 (19.1 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 737 LCPLHTSSNLPN-ENPGSQESRKKCISKKLLTQHNKVAFKSDIST 780
LC + P P S+K +++K L +K + D+ T
Sbjct: 1235 LCQTRIEKDTPEIVCPAMGISKKSLLTQKELPSQHKQEIRPDLET 1279
Score = 40 (19.1 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 377 GSTTP---ATSNEESEN---FVQKQTSISNAKFSQKSSNR 410
G TP S+EE + F QK S+ K QK+S++
Sbjct: 965 GEKTPIPKVQSSEEGSSQGLFNQKPKCSSSGKADQKNSSK 1004
Score = 40 (19.1 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 26/113 (23%), Positives = 42/113 (37%)
Query: 301 EAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALCP-RNTNPNNMIENGKLNKKGR 359
E+ L+ + V T I E ENE R + +N + N +
Sbjct: 736 ESELETQHIVKMFKTSKRTSFILESKEA-ENENRVNSAVEISQVETSNELPNVAECRHTS 794
Query: 360 KANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRG 412
+S ++ A S+ P + S + K+T +K S+ S NRRG
Sbjct: 795 LLSSAKEQSGALLKQGSPSSEP---KKTSPIHMLKKTE---SKHSKMSRNRRG 841
Score = 37 (18.1 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 491 EVNVLENVSVVQKKTYKDTVPQPSLIPTFEDADKKE 526
E+N EN++ + + KDT + T KK+
Sbjct: 638 EMNEQENIAQIPEFRVKDTNKNNEISDTVPSQLKKK 673
>UNIPROTKB|A2AE51 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:BX927221 EMBL:CR759838
EMBL:CR788282 EMBL:BX248419 EMBL:CR388382 EMBL:BX927189
HGNC:HGNC:12962 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00790584 SMR:A2AE51 Ensembl:ENST00000415966
Ensembl:ENST00000420345 Ensembl:ENST00000424124
Ensembl:ENST00000438064 Ensembl:ENST00000444979
Ensembl:ENST00000450103 Ensembl:ENST00000451189 Uniprot:A2AE51
Length = 159
Score = 127 (49.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMK-SGSN--CPVCKVPYHRREIR 64
L + E+ C ICL L V++ C HVFC +C SGS CP+CK P+ + IR
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIR 66
Query: 65 AAPHMDNLVS 74
++ +++
Sbjct: 67 PVWQLEKILN 76
>UNIPROTKB|E2QWA4 [details] [associations]
symbol:TRIM22 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070206 "protein trimerization" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
KO:K11999 CTD:10346 EMBL:AAEX03012850 RefSeq:XP_542402.2
ProteinModelPortal:E2QWA4 Ensembl:ENSCAFT00000010123 GeneID:485284
KEGG:cfa:485284 OMA:EARIVSF NextBio:20859324 Uniprot:E2QWA4
Length = 494
Score = 145 (56.1 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 40/118 (33%), Positives = 57/118 (48%)
Query: 13 RELKCPICLSLLSSAVSLTCNHVFCNACIV-KSMKSGSN------CPVCKVPYHRREIRA 65
+++ CPICL LL+ +SL C H FC ACI KSM+SG++ CPVC+ Y +R
Sbjct: 11 KDVTCPICLELLTMPLSLDCGHSFCQACITAKSMESGTHQGEEGTCPVCQCKYQFWNLRP 70
Query: 66 APHMDNLVS-VYKSMEVASGINIFVTQDESST--KSSGDLICGEQVTGGCQDKVEHQG 120
+ N+ V ++M V ++ T K G IC C EH+G
Sbjct: 71 NQPLANIAKKVRENMSPQKQKLCEVHGEKLLTFCKEDGKAICQH-----CAQSAEHRG 123
Score = 51 (23.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 15/62 (24%), Positives = 35/62 (56%)
Query: 443 DLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEEDFCTKSKR--RKVDSTEVNVLENVSV 500
+L + +K+ S ++ H R++ K ++ + ++ K+ +K++ EVNVL+N+ V
Sbjct: 156 ELEADIKEKRVSWKN-HMQSERQRILKGFNEMRDILNSEEKKVLQKLEEDEVNVLDNLIV 214
Query: 501 VQ 502
+
Sbjct: 215 AR 216
Score = 43 (20.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 754 QESRKKCISKKLLTQHNKVA-FKSDISTNSWQSWENKL 790
QE + + KKL +H KV ++DI SW+N +
Sbjct: 137 QEKLQAAL-KKLRKEHTKVEELEADIKEKR-VSWKNHM 172
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 126 (49.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 17 CPICLSLLSSAVSLT-CNHVFCNACIVKSMK-SGSNCPVCKVPYHRREIRAAP 67
CP+C +L + V T C HVFC C + +M+ SG++CP+C+ RRE RA P
Sbjct: 18 CPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRE-RACP 69
>UNIPROTKB|J3QKM8 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000580499
Uniprot:J3QKM8
Length = 142
Score = 126 (49.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 17 CPICLSLLSSAVSLT-CNHVFCNACIVKSMK-SGSNCPVCKVPYHRREIRAAP 67
CP+C +L + V T C HVFC C + +M+ SG++CP+C+ RRE RA P
Sbjct: 18 CPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRE-RACP 69
>UNIPROTKB|Q1ACD6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9590 "Symphalangus syndactylus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY843509 EMBL:DQ229284 ProteinModelPortal:Q1ACD6
SMR:Q1ACD6 Uniprot:Q1ACD6
Length = 494
Score = 149 (57.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K+ +CPVC++ Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDEGERSCPVCRISYQHK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 NIQPNRHVANIVEKLREVKLS 86
>UNIPROTKB|E7EQW4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00947541
ProteinModelPortal:E7EQW4 SMR:E7EQW4 Ensembl:ENST00000476777
ArrayExpress:E7EQW4 Bgee:E7EQW4 Uniprot:E7EQW4
Length = 222
Score = 140 (54.3 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 55/208 (26%), Positives = 98/208 (47%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEHQGTSKGKRFRRTSKATVEPS--GTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEG 172
+ + S+ + + +V+ S GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLETSLSVQLSNLGTVRT---LRTKQRIQ------PQKTSVYIELGS 183
Query: 173 GTVKNTTGELKSSSVVIRENPVINKEGT 200
+ ++T + SV +E I +GT
Sbjct: 184 DSSEDTVNKATYCSVGDQELLQITPQGT 211
>UNIPROTKB|Q9BYJ4 [details] [associations]
symbol:TRIM34 "Tripartite motif-containing protein 34"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005737 EMBL:CH471064 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ eggNOG:NOG259921 KO:K11999
EMBL:AB039902 EMBL:AB039903 EMBL:AB039904 EMBL:AF220143
EMBL:AF220144 EMBL:AK027876 EMBL:AL583914 IPI:IPI00107816
IPI:IPI00719282 RefSeq:NP_001003827.1 RefSeq:NP_067629.2
RefSeq:NP_569074.2 UniGene:Hs.729048 PDB:2EGP PDBsum:2EGP
ProteinModelPortal:Q9BYJ4 SMR:Q9BYJ4 IntAct:Q9BYJ4
PhosphoSite:Q9BYJ4 DMDM:55976584 PaxDb:Q9BYJ4 PRIDE:Q9BYJ4
DNASU:53840 Ensembl:ENST00000429814 Ensembl:ENST00000457787
Ensembl:ENST00000514226 GeneID:53840 KEGG:hsa:53840 UCSC:uc001mbh.3
CTD:53840 GeneCards:GC11P005618 GeneCards:GC11P005619
HGNC:HGNC:10063 MIM:605684 neXtProt:NX_Q9BYJ4 PharmGKB:PA35533
InParanoid:Q9BYJ4 EvolutionaryTrace:Q9BYJ4 GenomeRNAi:53840
NextBio:56186 ArrayExpress:Q9BYJ4 Bgee:Q9BYJ4 CleanEx:HS_TRIM34
Genevestigator:Q9BYJ4 GermOnline:ENSG00000121236 Uniprot:Q9BYJ4
Length = 488
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACI-------VKSMKSGSNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H C ACI V SM S+CPVC + Y ++A
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQAN 71
Query: 67 PHMDNLVSVYKSMEVA 82
H+ N+V K ++++
Sbjct: 72 QHLANIVERLKEVKLS 87
>UNIPROTKB|E7EWN5 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00930098
ProteinModelPortal:E7EWN5 SMR:E7EWN5 Ensembl:ENST00000470026
ArrayExpress:E7EWN5 Bgee:E7EWN5 Uniprot:E7EWN5
Length = 649
Score = 158 (60.7 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 68/255 (26%), Positives = 118/255 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS-VYK---------SMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD 114
+ LV + K +E A+ N F ++ +S + D + Q + G ++
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYN-FAKKENNSPEHLKDEVSIIQ-SMGYRN 132
Query: 115 KVEH--QGTSKGKRFRRTSKAT-VEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLE 171
+ + Q + + TS + + GTV T TK+R+Q P+ + +L
Sbjct: 133 RAKRLLQSEPENPSLQETSLSVQLSNLGTVRT---LRTKQRIQ------PQKTSVYIELG 183
Query: 172 GGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDE---EDREKSS-QHTETDAYI 227
+ ++T + SV +E I +GT RDE + +K++ + +ETD
Sbjct: 184 SDSSEDTVNKATYCSVGDQELLQITPQGT--------RDEISLDSAKKAACEFSETDVTN 235
Query: 228 TPPDVPSFSDLKDSE 242
T PS +DL +E
Sbjct: 236 TEHHQPSNNDLNTTE 250
Score = 39 (18.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNK------GSTTPATS--NEESENFVQ 393
NT ++ N LN ++A +KY + G+ T A+S +E S +
Sbjct: 235 NTE-HHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLT 293
Query: 394 K-QTSISNAKFSQKS 407
K + ++ A+F KS
Sbjct: 294 KDRMNVEKAEFCNKS 308
>UNIPROTKB|Q1L721 [details] [associations]
symbol:rnf138 "E3 ubiquitin-protein ligase RNF138"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IPI] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0051865 "protein autoubiquitination" evidence=IDA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016055
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042787 GO:GO:0051865
HOVERGEN:HBG074331 CTD:51444 KO:K10668 EMBL:DQ011285
RefSeq:NP_001089974.1 UniGene:Xl.52927 ProteinModelPortal:Q1L721
GeneID:735045 KEGG:xla:735045 Xenbase:XB-GENE-1001378
Uniprot:Q1L721
Length = 222
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1 MGDQRSHLEKMGRELKCPICLSLLSSAV-SLTCNHVFCNACIVKSMKSG-SNCPVCKVPY 58
M + S ++ E CP+C +L + V + TC HVFC C + +MKSG + CP+C+ P
Sbjct: 1 MAEAMSCSSEITEEFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPLCRGPV 60
Query: 59 HRREIRAAP 67
++ E R+AP
Sbjct: 61 NKSE-RSAP 68
>UNIPROTKB|Q5D7I3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9538 "Erythrocebus patas" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY740619 EMBL:AY843514
ProteinModelPortal:Q5D7I3 SMR:Q5D7I3 Uniprot:Q5D7I3
Length = 495
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM---KSGSNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H FC ACI KSM + +CPVC++ Y I+
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHKKSMLYKEEERSCPVCRISYQPENIQPN 71
Query: 67 PHMDNLVSVYKSMEVA 82
H+ N+V + ++++
Sbjct: 72 RHVANIVEKLREVKLS 87
>UNIPROTKB|E9PR29 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00983538 ProteinModelPortal:E9PR29 SMR:E9PR29
Ensembl:ENST00000533021 ArrayExpress:E9PR29 Bgee:E9PR29
Uniprot:E9PR29
Length = 198
Score = 134 (52.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 3 DQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV-------KSMKSGSNCPVCK 55
D + +E + E+ CPIC++ L +S+ C H FC++C+ +S G CP+C+
Sbjct: 2 DPTALVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCR 61
Query: 56 VPYHRREIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVT---GGC 112
P R +R + N+V + + + G+ + E + + C E V C
Sbjct: 62 APVQPRNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKL-KMFCKEDVLIMCEAC 120
Query: 113 QDKVEHQGTS 122
EH+ S
Sbjct: 121 SQSPEHEAHS 130
>UNIPROTKB|Q90X95 [details] [associations]
symbol:bard1 "BRCA1-associated RING domain protein"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184
SMART:SM00248 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 CTD:580 HOVERGEN:HBG050662 KO:K10683 HSSP:Q99728
EMBL:AF416869 RefSeq:NP_001082131.1 UniGene:Xl.12056
ProteinModelPortal:Q90X95 SMR:Q90X95 IntAct:Q90X95 GeneID:398242
KEGG:xla:398242 Xenbase:XB-GENE-492039 Uniprot:Q90X95
Length = 772
Score = 127 (49.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 5 RSHLEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREI 63
R L +M R+L C C+ +L V L C HVFC C+ +++ G+ CP+C P R++
Sbjct: 32 RDALREMERKLCCSKCMFILKDPVCLGGCEHVFCWTCVNENL--GNECPLCNTPAWVRDV 89
Query: 64 RAAPHMDNLVSV 75
+ +DN++ +
Sbjct: 90 QVNRQLDNMIQL 101
Score = 71 (30.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 32/142 (22%), Positives = 57/142 (40%)
Query: 341 RNTNPNNMIENGKLNKKG----RKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQT 396
+N P + N NK G + ST+ K+ ++ STT T ++E + K+
Sbjct: 257 KNDTPEEISPNW--NKCGLDEPMEMQSTSMKEVNCPSPSEQSTTLKTQDKEKKITTVKRK 314
Query: 397 SISNAKFSQKSSNRRGTCAAEPIPDNVLAASV---RTEIVDQHGKNIGSDLPTSLGKKQG 453
S+ S K RR + ++P+ D+ + A+ + V H + S + Q
Sbjct: 315 KHSSPIASSKRPRRRSSDTSKPLNDSDIKANSPEKACKTVSPHKPSENSAKDVRIESTQA 374
Query: 454 SDEDLHFMKTRKKCWKINSQTE 475
+ D T C K N+ +
Sbjct: 375 AKRDTKMCSTPLPCAKQNNSAK 396
>UNIPROTKB|Q58DK8 [details] [associations]
symbol:TRIM38 "Tripartite motif-containing protein 38"
species:9913 "Bos taurus" [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0004871 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:BT021589 EMBL:BC104589
IPI:IPI00703175 RefSeq:NP_001029746.1 UniGene:Bt.36917
ProteinModelPortal:Q58DK8 PRIDE:Q58DK8 Ensembl:ENSBTAT00000024658
GeneID:531022 KEGG:bta:531022 CTD:10475 eggNOG:NOG271582
InParanoid:Q58DK8 KO:K12014 OMA:QITEWNE OrthoDB:EOG495ZRS
NextBio:20875371 ArrayExpress:Q58DK8 Uniprot:Q58DK8
Length = 460
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK------SMKSGS---NCPVCKVPYH 59
+KM E C ICL L+++AVS++C H +C+ CIV M G +CP C+ P+
Sbjct: 4 KKMREEATCSICLHLMTNAVSISCGHSYCHVCIVSFFENLNRMTPGLKTFSCPQCRAPFT 63
Query: 60 RREIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC 104
+R + NL+ V K M+ + + G LIC
Sbjct: 64 MASLRPNKQLGNLIEVIKEMDQEMSCEEHGEKLHLFCEDEGQLIC 108
>UNIPROTKB|Q8IYM9 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0009615 "response to virus"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0003714 GO:GO:0019048
GO:GO:0006955 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0016567
GO:GO:0051607 GO:GO:0009615 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0015030 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 EMBL:X82200
EMBL:BC022281 EMBL:BC035582 IPI:IPI00477398 IPI:IPI00477812
PIR:A57041 RefSeq:NP_001186502.1 RefSeq:NP_006065.2
UniGene:Hs.501778 UniGene:Hs.684559 UniGene:Hs.733231
ProteinModelPortal:Q8IYM9 SMR:Q8IYM9 IntAct:Q8IYM9
MINT:MINT-2868217 STRING:Q8IYM9 PhosphoSite:Q8IYM9 DMDM:47606181
PaxDb:Q8IYM9 PRIDE:Q8IYM9 DNASU:10346 Ensembl:ENST00000379965
GeneID:10346 KEGG:hsa:10346 UCSC:uc001mbr.3 UCSC:uc009yes.3
CTD:10346 GeneCards:GC11P005667 HGNC:HGNC:16379 HPA:HPA003307
HPA:HPA003575 MIM:606559 neXtProt:NX_Q8IYM9 PharmGKB:PA38129
eggNOG:NOG258942 InParanoid:Q8IYM9 OMA:HQTFRIN ChiTaRS:TRIM22
GenomeRNAi:10346 NextBio:39235 ArrayExpress:Q8IYM9 Bgee:Q8IYM9
CleanEx:HS_TRIM22 Genevestigator:Q8IYM9 GermOnline:ENSG00000132274
Uniprot:Q8IYM9
Length = 498
Score = 150 (57.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 13 RELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHRREIRA 65
+E+ CPICL LL+ +SL C H FC ACI +K S+CPVC+ + +R
Sbjct: 11 KEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRP 70
Query: 66 APHMDNLVSVYKSMEVA--SGINIFVTQDESST-----KSSGDLICGEQVTGGCQDKVEH 118
H+ N+V K ++++ G V + K G +IC C+ EH
Sbjct: 71 NRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWV-----CELSQEH 125
Query: 119 QG 120
QG
Sbjct: 126 QG 127
Score = 41 (19.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 485 RKVDSTEVNVLENVSVVQKKTYKDTVPQPSLI 516
+K++ EVNVL+N++ + + +LI
Sbjct: 203 QKLEEGEVNVLDNLAAATDQLVQQRQDASTLI 234
>UNIPROTKB|A1YER5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9595 "Gorilla gorilla gorilla" [GO:0031519 "PcG protein
complex" evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ976446 ProteinModelPortal:A1YER5
SMR:A1YER5 PRIDE:A1YER5 Uniprot:A1YER5
Length = 377
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 16 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 75
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 76 ALISKIYPSRE 86
>UNIPROTKB|A1YFY1 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9597 "Pan paniscus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ977176 ProteinModelPortal:A1YFY1
SMR:A1YFY1 Uniprot:A1YFY1
Length = 377
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 16 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 75
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 76 ALISKIYPSRE 86
>UNIPROTKB|A2T6X5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9598 "Pan troglodytes" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
CTD:6015 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:DQ977325 RefSeq:NP_001074951.1
UniGene:Ptr.3708 ProteinModelPortal:A2T6X5 SMR:A2T6X5 STRING:A2T6X5
Ensembl:ENSPTRT00000065372 GeneID:462604 KEGG:ptr:462604
InParanoid:A2T6X5 NextBio:20841844 Uniprot:A2T6X5
Length = 377
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 16 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 75
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 76 ALISKIYPSRE 86
>UNIPROTKB|Q8WMN5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9544 "Macaca mulatta" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102 CTD:6015
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OrthoDB:EOG4SXND4 EMBL:AJ421778 RefSeq:NP_001108431.1
UniGene:Mmu.17368 ProteinModelPortal:Q8WMN5 SMR:Q8WMN5
STRING:Q8WMN5 GeneID:718137 KEGG:mcc:718137 InParanoid:Q8WMN5
NextBio:19978408 Uniprot:Q8WMN5
Length = 377
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 16 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 75
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 76 ALISKIYPSRE 86
>UNIPROTKB|Q5D7I2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:43777 "Pithecia pithecia" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843515
ProteinModelPortal:Q5D7I2 SMR:Q5D7I2 Uniprot:Q5D7I2
Length = 494
Score = 147 (56.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 41/126 (32%), Positives = 59/126 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM-KSGS-NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI KSM G +CP+C++ Y
Sbjct: 6 LMNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKKSMLHQGERSCPLCRISYPSE 65
Query: 62 EIRAAPHMDNLVS----VYKSMEVASGINIFVTQDESST---KSSGDLICGEQVTGGCQD 114
+R H+ N+V V S E ++ E + G++IC C+
Sbjct: 66 NLRPNRHLANIVERLREVMLSPEEGQKVDHCARHGEKLLLFCQQDGNVICWL-----CER 120
Query: 115 KVEHQG 120
EH+G
Sbjct: 121 SQEHRG 126
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/80 (20%), Positives = 38/80 (47%)
Query: 431 EIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEE-DFCTKSKRRK--V 487
E+ + +N+ L T K+Q +++ ++ + WKI + ++ + + K+ + +
Sbjct: 134 EVAQTYRENLQVALETMRQKQQDAEKLEADVREEQASWKIQIRDDKTNIMAEFKQLRDIL 193
Query: 488 DSTEVNVLENVSVVQKKTYK 507
D E N L+ + +K K
Sbjct: 194 DCEESNELQILEKEEKNILK 213
>UNIPROTKB|B2RNG4 [details] [associations]
symbol:TRIM6-TRIM34 "TRIM6-TRIM34 readthrough transcript"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 EMBL:AC015691 KO:K11999
UniGene:Hs.729048 HGNC:HGNC:10063 EMBL:BC136871 EMBL:BC140722
IPI:IPI00854740 RefSeq:NP_001003819.1 ProteinModelPortal:B2RNG4
SMR:B2RNG4 PRIDE:B2RNG4 Ensembl:ENST00000337072
Ensembl:ENST00000354852 GeneID:445372 KEGG:hsa:445372
UCSC:uc001mbf.3 CTD:445372 HGNC:HGNC:33440 OMA:ACITQNS
GenomeRNAi:445372 NextBio:111386 ArrayExpress:B2RNG4 Bgee:B2RNG4
Uniprot:B2RNG4
Length = 842
Score = 148 (57.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACI-------VKSMKSGSNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H C ACI V SM S+CPVC + Y ++A
Sbjct: 366 EVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQAN 425
Query: 67 PHMDNLVSVYKSMEVA 82
H+ N+V K ++++
Sbjct: 426 QHLANIVERLKEVKLS 441
Score = 140 (54.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +S+ C H FC ACI +S+ + G +CPVC+ Y +R
Sbjct: 40 EVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPN 99
Query: 67 PHMDNLVSVYKSMEVASGINI-FVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ N+V + + + G + V + K L C G+ + C+ EH+G
Sbjct: 100 RHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQ--LFCQEDGKVICWLCERSQEHRG 155
Score = 48 (22.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 20/95 (21%), Positives = 43/95 (45%)
Query: 431 EIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEEDFCTKSKRRKVDST 490
E+ ++ + L ++Q +++ F++ +K WK +Q E + C ++ T
Sbjct: 163 EVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWK--NQMEPERC------RIQ-T 213
Query: 491 EVNVLENV--SVVQKKTYKDTVPQPSLIPTFEDAD 523
E N L N+ V Q++ K + + E+A+
Sbjct: 214 EFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAE 248
Score = 45 (20.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 472 SQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
+Q+ + + +RR ST + +L++VS V +++ T+ +P +PT
Sbjct: 255 TQSLRELISDLERRCQGST-MELLQDVSDVTERSEFWTLRKPEALPT 300
>UNIPROTKB|F1MUV0 [details] [associations]
symbol:RING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:QSASKTW EMBL:DAAA02054894
EMBL:DAAA02054895 IPI:IPI00718372 Ensembl:ENSBTAT00000054269
ArrayExpress:F1MUV0 Uniprot:F1MUV0
Length = 382
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 20 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 79
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 80 ALISKIYPSRE 90
>RGD|1310896 [details] [associations]
symbol:Trim6 "tripartite motif containing 6" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0070206 "protein trimerization" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1310896 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
OrthoDB:EOG4229JJ KO:K11999 CTD:117854 EMBL:AC113720
IPI:IPI00394064 RefSeq:NP_001163932.1 UniGene:Rn.80076
ProteinModelPortal:D4A3L4 Ensembl:ENSRNOT00000023043 GeneID:293294
KEGG:rno:293294 UCSC:RGD:1310896 NextBio:635769 Uniprot:D4A3L4
Length = 488
Score = 141 (54.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +S+ C H FC ACI+ + + S+CPVC+ Y +R
Sbjct: 12 EVTCPICLELLTEPLSIDCGHSFCQACIIGNSDNSVLNPEGKSSCPVCRTVYQPGSLRPN 71
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ +V + + + G + V + L C G+ + C+ +EH+G
Sbjct: 72 RHLAAIVKRLREVVLGPGKQLEVIFCALHGEKL-QLFCKEDGKLICWLCERSLEHRG 127
Score = 50 (22.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 472 SQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
SQ +D + + R ST V +L++V V K++ T+ +P +PT
Sbjct: 227 SQALKDLISDLEHRCRGST-VELLQDVGDVTKRSEFWTLKKPQALPT 272
>UNIPROTKB|K7GLC7 [details] [associations]
symbol:LOC100738479 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR000679 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50114 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000034639 Uniprot:K7GLC7
Length = 487
Score = 152 (58.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKS-----MKSG--SNCPVCKVPYHRREIRAA 66
E+ CP+CL LL+ +S+ C H FC ACI ++ M G S+CPVC+ Y +R
Sbjct: 12 EVTCPLCLELLTDPLSIDCGHSFCQACITQNSEEWRMDQGGESSCPVCQTRYRPGNLRPN 71
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ N+ + + + SG + V + L C G+ + C+ EH+G
Sbjct: 72 RHLANIAERLREVVLGSGTQLKVILCAHHGEKL-QLFCREDGQLICWLCERAQEHRG 127
Score = 38 (18.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 472 SQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
SQ+ + + +RR + +L++V V +++ T+ +P +PT
Sbjct: 227 SQSLRELISDLERR-CQGSMTELLQDVRDVAERSEFWTLKKPEALPT 272
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 45 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 104
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 105 ALISKIYPSRE 115
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 45 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 104
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 105 ALISKIYPSRE 115
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 45 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 104
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 105 ALISKIYPSRE 115
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 45 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 104
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 105 ALISKIYPSRE 115
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 45 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 104
Query: 71 NLVS-VYKSME 80
L+S +Y S E
Sbjct: 105 ALISKIYPSRE 115
>UNIPROTKB|F1N541 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646 KO:K11999
CTD:117854 EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00883463
RefSeq:NP_001192118.1 UniGene:Bt.111657 Ensembl:ENSBTAT00000015712
GeneID:514492 KEGG:bta:514492 OMA:HHKHEYR NextBio:20871361
ArrayExpress:F1N541 Uniprot:F1N541
Length = 487
Score = 147 (56.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 38/117 (32%), Positives = 57/117 (48%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSG-SNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +S+ C H FC ACI +SM + G S CPVC+ Y +R
Sbjct: 12 EVTCPICLELLTEPLSIDCGHSFCQACITADNKESMPGQEGQSRCPVCQTSYWLGNLRPN 71
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ N+ + + + SG + V + L C G+ + C+ EH+G
Sbjct: 72 RHLANIAERLREVVLGSGKQLKVILCVHHGEKL-QLFCEEDGKLICWLCERSQEHRG 127
Score = 43 (20.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 472 SQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
SQ+ + + + R + +L++VS V K++ T+ +P +PT
Sbjct: 227 SQSLRELISDLEHR-CQGSATELLQDVSDVAKRSEFWTLKKPEALPT 272
>UNIPROTKB|Q1ACD5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9490 "Saguinus oedipus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:DQ229285 ProteinModelPortal:Q1ACD5 SMR:Q1ACD5
Uniprot:Q1ACD5
Length = 494
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K + +CP+C++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESTPHQGERSCPLCRMSYPSE 65
Query: 62 EIRAAPHMDNLVSVYKSM 79
+R H+ N+V K +
Sbjct: 66 NLRPNRHLANIVERLKEV 83
>UNIPROTKB|Q5C8U1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:78454 "Saguinus labiatus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740615 EMBL:AY843518
ProteinModelPortal:Q5C8U1 SMR:Q5C8U1 Uniprot:Q5C8U1
Length = 494
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K + +CP+C++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESTPHQGERSCPLCRMSYPSE 65
Query: 62 EIRAAPHMDNLVSVYKSM 79
+R H+ N+V K +
Sbjct: 66 NLRPNRHLANIVERLKEV 83
>UNIPROTKB|Q5C8U3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:60712 "Chlorocebus tantalus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY593973 EMBL:AY740613 EMBL:DQ437606
ProteinModelPortal:Q5C8U3 SMR:Q5C8U3 Uniprot:Q5C8U3
Length = 515
Score = 144 (55.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS-------NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI + K +CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTEPLSLPCGHSFCQACITANHKESMLYKEEERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>MGI|MGI:106657 [details] [associations]
symbol:Trim21 "tripartite motif-containing 21" species:10090
"Mus musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006513 "protein monoubiquitination"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0070206
"protein trimerization" evidence=ISO] [GO:0090086 "negative
regulation of protein deubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:106657 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0032088
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
eggNOG:NOG276395 HOVERGEN:HBG001357 OrthoDB:EOG4KWJSP EMBL:L27990
IPI:IPI00331738 UniGene:Mm.321227 PDB:2VOK PDB:2VOL PDBsum:2VOK
PDBsum:2VOL ProteinModelPortal:Q62191 SMR:Q62191 STRING:Q62191
PhosphoSite:Q62191 PRIDE:Q62191 HOGENOM:HOG000234134
InParanoid:Q62191 EvolutionaryTrace:Q62191 CleanEx:MM_TRIM21
Genevestigator:Q62191 GermOnline:ENSMUSG00000030966 Uniprot:Q62191
Length = 470
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-SNCPVCKVPYHRREIRAA 66
LEKM E+ C ICL + +S+ C H FC CI + K+G S+CP C+ + R +R
Sbjct: 11 LEKMWEEVTCSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCPECRQQFLLRNLRPN 70
Query: 67 PHMDNLVSVYKSM 79
H+ N+V K +
Sbjct: 71 RHIANMVENLKQI 83
>UNIPROTKB|Q2YEN0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9545 "Macaca nemestrina" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899893 EMBL:AY899887 EMBL:AY899888
EMBL:AY899889 EMBL:AY899890 EMBL:AY899891 EMBL:AY899892
EMBL:DQ437602 ProteinModelPortal:Q2YEN0 SMR:Q2YEN0 Uniprot:Q2YEN0
Length = 495
Score = 151 (58.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y I+
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQPENIQPN 71
Query: 67 PHMDNLVSVYKSMEVA 82
H+ N+V + ++++
Sbjct: 72 RHVANIVEKLREVKLS 87
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 201 VLSPFFWLRDEEDREKSSQ 219
VL+ F LR+ DRE+S++
Sbjct: 183 VLADFEQLREILDREESNE 201
>UNIPROTKB|Q587N6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9541 "Macaca fascicularis" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AB210052 ProteinModelPortal:Q587N6
SMR:Q587N6 Uniprot:Q587N6
Length = 495
Score = 151 (58.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y I+
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQPENIQPN 71
Query: 67 PHMDNLVSVYKSMEVA 82
H+ N+V + ++++
Sbjct: 72 RHVANIVEKLREVKLS 87
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 201 VLSPFFWLRDEEDREKSSQ 219
VL+ F LR+ DRE+S++
Sbjct: 183 VLADFEQLREILDREESNE 201
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 120 (47.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIR 64
LE + E C +CL L V + C H FC ACI + ++ CPVC+ R +R
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 65 AAPHMDNLVSVYKSME 80
+ ++V + K ++
Sbjct: 80 PNRQLGSMVEIAKQLQ 95
>UNIPROTKB|E1BQ22 [details] [associations]
symbol:TRIM68 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060765 "regulation of androgen receptor signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005794 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0060765 InterPro:IPR017907
GO:GO:0051865 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
EMBL:DAAA02040960 IPI:IPI00715169 Ensembl:ENSBTAT00000015061
OMA:MQKLEQN Uniprot:E1BQ22
Length = 495
Score = 143 (55.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 3 DQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV-------KSMKSGSNCPVCK 55
D + +E + E+ CPIC++ L VS+ C H FC++C++ +S +CP+C+
Sbjct: 2 DPATLMEAVVEEVACPICMTFLKEPVSIDCGHSFCHSCLLGLWEVPGESQNWAYSCPLCR 61
Query: 56 VPYHRREIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQ---VTGGC 112
P R +R + N+V + + + G+ + E + + C E V C
Sbjct: 62 APIEPRNLRPNWQLANVVEKVRRLGLHPGMGLRADMCEPHREQL-KMFCKEDGLIVCEAC 120
Query: 113 QDKVEHQGTS 122
EHQ S
Sbjct: 121 SRSPEHQAHS 130
>RGD|2218 [details] [associations]
symbol:Brca1 "breast cancer 1, early onset" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0001726 "ruffle" evidence=ISO] [GO:0003684 "damaged
DNA binding" evidence=ISO;TAS] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005694
"chromosome" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006301 "postreplication
repair" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006349 "regulation of gene expression by genetic imprinting"
evidence=ISO] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007098 "centrosome cycle"
evidence=ISO] [GO:0007420 "brain development" evidence=IEP]
[GO:0007584 "response to nutrient" evidence=IEP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=ISO]
[GO:0010033 "response to organic substance" evidence=IEP] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO;ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0033993 "response
to lipid" evidence=IEP] [GO:0034446 "substrate adhesion-dependent
cell spreading" evidence=ISO] [GO:0035066 "positive regulation of
histone acetylation" evidence=ISO] [GO:0035067 "negative regulation
of histone acetylation" evidence=ISO] [GO:0043009 "chordate embryonic
development" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISO;ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051571 "positive regulation of histone
H3-K4 methylation" evidence=ISO] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=ISO] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISO]
[GO:0051865 "protein autoubiquitination" evidence=ISO;ISS]
[GO:0070512 "positive regulation of histone H4-K20 methylation"
evidence=ISO] [GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=ISO] [GO:0071681
"cellular response to indole-3-methanol" evidence=ISO] [GO:0085020
"protein K6-linked ubiquitination" evidence=ISO;ISS] [GO:2000145
"regulation of cell motility" evidence=ISO] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=ISO] [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=ISO]
[GO:0005925 "focal adhesion" evidence=ISO] [GO:0031941 "filamentous
actin" evidence=ISO] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 RGD:2218
Prosite:PS00518 GO:GO:0005694 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 GO:GO:0006633 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730
KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820
GO:GO:0043009 GO:GO:0009048 EMBL:AF036760 EMBL:S82504 EMBL:S82502
EMBL:U60523 EMBL:S82500 IPI:IPI00202716 RefSeq:NP_036646.1
UniGene:Rn.217584 UniGene:Rn.48840 PDB:1L0B PDBsum:1L0B
ProteinModelPortal:O54952 SMR:O54952 STRING:O54952 PhosphoSite:O54952
PRIDE:O54952 GeneID:497672 KEGG:rno:497672 UCSC:RGD:2218
InParanoid:O54952 EvolutionaryTrace:O54952 NextBio:697729
Genevestigator:O54952 GermOnline:ENSRNOG00000020701 GO:GO:0007098
Uniprot:O54952
Length = 1817
Score = 156 (60.0 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 110/508 (21%), Positives = 201/508 (39%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 LHAMQKILECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQ 74
Query: 65 AAPHMDNLVS----VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQG 120
+ LV + + E+ +G+ S K+S + E + V ++
Sbjct: 75 GSARFSQLVEELLKIIDAFELDTGMQCANGFSFSKKKNSSSELLNEDAS--IIQSVGYRN 132
Query: 121 TSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTG 180
K + + AT++ S +V + + ++ + P+ + LE + +
Sbjct: 133 RVKKLQQIESGSATLKDSLSVQLS-NLGIVRSMKKNRQTQPQNKSVYIALESDSSEERVN 191
Query: 181 ELKSSSVVIRENPVI-----NKEGTVLSPFFWLRDEEDREKSSQHTE-TDAYITPPDVPS 234
SV +E I EG + S D + ++ +H + +D + P +
Sbjct: 192 APDGCSVRDQELFQIAPGGAGDEGKLNSAKKAACDFSEGIRNIEHHQCSDKDLNPTE--- 248
Query: 235 FSDLKDSEDISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVAD-A 293
+ + +S A VH + G D S + T+ E K + D +
Sbjct: 249 -NHATERHPEKCPRIS-VANVHVEPCGTDARASSLQRGTRSLLFTEDRLDAEKAEFCDRS 306
Query: 294 EENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNEN-EGRC--------KALCPRNTN 344
+++G + + +++ + NG V +G + N + C K+LCP N+
Sbjct: 307 KQSGAAVSQQSRWADSK-ETCNGRP--VPRTEGKADPNVDSLCGRKQWNHPKSLCPENSG 363
Query: 345 PNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFS 404
+ LN +K N + ++ S SN E+ ++ + FS
Sbjct: 364 ATTDVPWITLNSSIQKVNEWFSRTGEMLTSDNASDRRPASNAEAAVVLEVSNEVDGC-FS 422
Query: 405 QKSSNRRGTCAAEPIPDN-VLAASVRTEIVDQHGKNIGSDLPTSLGK---KQGSDEDLHF 460
SS + A P PDN V+ S R + +NI +D GK ++GS L+
Sbjct: 423 --SSKKIDLVA--PDPDNAVMCTSGRD--FSKPVENIIND--KIFGKTYQRKGSRPHLNH 474
Query: 461 MKTRKKCWKINSQT--EEDFCTKSKRRK 486
+ + Q E+ F K KR++
Sbjct: 475 VTEIIGTFTTEPQIIQEQPFTNKLKRKR 502
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 742 TSSNLPNENPGSQESRKKCISK 763
TS N+ NENP SQ ++ C K
Sbjct: 1413 TSKNI-NENPVSQNPKRACDDK 1433
Score = 43 (20.2 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 758 KKCISKKLLTQHNKVAFKSDISTNSWQSWENKLVLCCSALTVGEQVYCTD 807
K +KLL+ H + K D+ T S + L G Q+YC +
Sbjct: 1667 KSIQERKLLSVH-EFEVKGDVVTGSNHQGPRRSRESQEKLFEGLQIYCCE 1715
Score = 42 (19.8 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 718 VPCAKLILQCRWDTDNFVMLCPLHTSSNLPNENPGSQESRKKCIS 762
+PC + +L R + + C + +P + G+Q RK IS
Sbjct: 1187 LPCFQHLLS-RVSSTPELTRCSSVVTQRVPEKAKGTQAPRKSSIS 1230
>UNIPROTKB|Q5D7I5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9493 "Callithrix pygmaea" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843512
ProteinModelPortal:Q5D7I5 SMR:Q5D7I5 Uniprot:Q5D7I5
Length = 494
Score = 144 (55.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K + +CP+C++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRMSYPSE 65
Query: 62 EIRAAPHMDNLVSVYKSM 79
+R H+ N+V K +
Sbjct: 66 NLRPNRHLANIVERLKEV 83
Score = 45 (20.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 38/137 (27%), Positives = 55/137 (40%)
Query: 128 RRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTGELK-SSS 186
R + T+ PS CT S +++V+ Q P+ + P K G + G L +S
Sbjct: 297 RYWAHVTLVPSHPSCTVIS-EDERQVRY-QVPIHQ-PLVKVKYFYGVL----GSLSITSG 349
Query: 187 VVIRENPVINKEGTVLSPF-FW--------LRDEEDREKSSQHT----ETDAYITPPDVP 233
E V NK G +L W LR E + K+ TD Y D
Sbjct: 350 KHYWEVDVSNKRGWILGVCGSWKCNAKWNVLRPENYQPKNGYWVIGLRNTDNYSAFQDAV 409
Query: 234 SFSDLKD-SEDISSSEL 249
+SD++D S +SS L
Sbjct: 410 KYSDVQDGSRSVSSGPL 426
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 44 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 103
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 104 ALISKIYPSRD 114
>UNIPROTKB|Q587N7 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9534 "Chlorocebus aethiops" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY669399 EMBL:AY625002 EMBL:AY625003
EMBL:AB210050 EMBL:AB210051 EMBL:AY843504 ProteinModelPortal:Q587N7
SMR:Q587N7 PRIDE:Q587N7 Uniprot:Q587N7
Length = 515
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS-------NCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H FC ACI + K +CPVC++ Y I+
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHKESMLYKEEERSCPVCRISYQPENIQPN 71
Query: 67 PHMDNLVSVYKSMEVA 82
H+ N+V + ++++
Sbjct: 72 RHVANIVEKLREVKLS 87
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC+ CIV +++SG+ CP C K +R +R P+ D
Sbjct: 45 ELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFD 104
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 105 ALISKIYPSRD 115
>UNIPROTKB|A2AE48 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
eggNOG:NOG291505 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00798036 SMR:A2AE48 Ensembl:ENST00000412755
Ensembl:ENST00000416596 Ensembl:ENST00000422802
Ensembl:ENST00000423901 Ensembl:ENST00000438785
Ensembl:ENST00000446196 Ensembl:ENST00000446540
Ensembl:ENST00000449136 HOGENOM:HOG000088612 Uniprot:A2AE48
Length = 248
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMK-SGSN--CPVCKVPYHRREIR 64
L + E+ C ICL L V++ C HVFC +C SGS CP+CK P+ + IR
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIR 66
Query: 65 AAPHMDNLVSVYKSMEVASGINIF-VTQDESSTK 97
+ +LV + ++V G VT+++ K
Sbjct: 67 PVWQLASLVENIERLKVDKGRQPGEVTREQQDAK 100
>DICTYBASE|DDB_G0278935 [details] [associations]
symbol:rad18 "C3HC4-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR003034
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00513
dictyBase:DDB_G0278935 Prosite:PS00518 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 EMBL:AAFI02000024
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0008094 KO:K10695 RefSeq:XP_641970.2
ProteinModelPortal:Q54XR0 EnsemblProtists:DDB0304878 GeneID:8621702
KEGG:ddi:DDB_G0278935 eggNOG:NOG328594 InParanoid:Q54XR0
OMA:IHANECL Uniprot:Q54XR0
Length = 668
Score = 123 (48.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 3 DQRSHLEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRR 61
+ ++ G+ LKCPIC ++A+ + C+H +C+ CI +S+ CP C++ +
Sbjct: 5 NNNEEIDLFGQLLKCPICYDFFNTAMMIPKCSHNYCSFCIRQSLSFKEFCPSCRISCNAT 64
Query: 62 EIRAAPHMDNLVSVYKSM 79
++ +D +V YKS+
Sbjct: 65 QLVNNRQLDLIVQNYKSL 82
Score = 70 (29.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 21/94 (22%), Positives = 37/94 (39%)
Query: 326 GNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSN 385
G+ N N N N NN N K RK +S + + + + +T+ TS
Sbjct: 162 GSNNNNNNNNNN---NNNNNNNNNSNAKNKTPTRKRSSISNEPISPPPPSPSNTSKTTSV 218
Query: 386 EESENFVQKQTSISNAKFSQKSSNRRGTCAAEPI 419
S+N + T+ + + + + T + PI
Sbjct: 219 NSSQNSITTTTTTTTTTMTSPNKRSKTTPPSTPI 252
Score = 69 (29.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 43/194 (22%), Positives = 72/194 (37%)
Query: 214 REKSSQHTETDAYITPPDVPSFSDLKDSEDISSSELSPTAEVHGKSDGLDFFESEIFEWT 273
R++SS E I+PP PS S+ + ++SS+ S T + + T
Sbjct: 192 RKRSSISNEP---ISPPP-PSPSNTSKTTSVNSSQNSITTTTTTTTTTMTSPNKR--SKT 245
Query: 274 QRACSPELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNENEG 333
+P + + ++++ ++ N +N + +N N N N N
Sbjct: 246 TPPSTPIAIVTRSRSRNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 305
Query: 334 RCKALCPRNTNPNNMIENGKLNKKGRKANSTAQ--KKYAKRDTNKGSTT--PATSNEESE 389
N N NN N N + +T Y++ D ST P +S+ S
Sbjct: 306 NNNNNNNNNNNNNNNNNNNNTNASNIEIQNTFNITSSYSENDITPTSTQSPPKSSSFSST 365
Query: 390 NFVQK-QTSISNAK 402
K Q +SNAK
Sbjct: 366 KSPSKEQKVVSNAK 379
Score = 67 (28.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 339 CPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSI 398
C N N NN N N NS A+ K R + S P + S + K TS+
Sbjct: 161 CGSNNNNNN--NNNNNNNNNNNNNSNAKNKTPTRKRSSISNEPISPPPPSPSNTSKTTSV 218
Query: 399 SNAKFS 404
++++ S
Sbjct: 219 NSSQNS 224
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESEN 390
N N NN +N N K + +T TN STT TSN+ EN
Sbjct: 610 NRNNNNNKKNNNNNNKSFQPTTTTSST-TTTITNSHSTT-TTSNDNIEN 656
Score = 56 (24.8 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/82 (24%), Positives = 27/82 (32%)
Query: 327 NGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNE 386
N N N N N NN N N N+ + N + T A SN
Sbjct: 273 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNA-SNI 331
Query: 387 ESENFVQKQTSISNAKFSQKSS 408
E +N +S S + S+
Sbjct: 332 EIQNTFNITSSYSENDITPTST 353
Score = 53 (23.7 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNA 401
N N NN N N N+ + N + +N + N T+ SN
Sbjct: 272 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNASNI 331
Query: 402 KFSQKSSN 409
+ Q + N
Sbjct: 332 EI-QNTFN 338
Score = 53 (23.7 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 18/82 (21%), Positives = 24/82 (29%)
Query: 327 NGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNE 386
N N N N N NN N N N+ + N + +N
Sbjct: 262 NSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 321
Query: 387 ESENFVQKQTSISNAKFSQKSS 408
+ N I N F+ SS
Sbjct: 322 NNNNTNASNIEIQNT-FNITSS 342
Score = 51 (23.0 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 21/88 (23%), Positives = 30/88 (34%)
Query: 327 NGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGS----TTPA 382
N N N N N NN N N N+ +TN + T
Sbjct: 279 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNASNIEIQNTFN 338
Query: 383 TSNEESENFVQKQTSISNAKFSQKSSNR 410
++ SEN + ++ S K S SS +
Sbjct: 339 ITSSYSENDITPTSTQSPPKSSSFSSTK 366
Score = 50 (22.7 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 144 KPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTT 179
K PT+KR ++ P+ P P+ T N++
Sbjct: 186 KNKTPTRKRSSISNEPISPPPPSPSNTSKTTSVNSS 221
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 47/219 (21%), Positives = 80/219 (36%)
Query: 266 ESEIFEWTQRACSPELLPSPAKTQVADAEENGKGLEAALQGSNTV-VDISNGNATCVIFE 324
+S F T+ + + S AK + D +E L + ++I+N N
Sbjct: 358 KSSSFSSTKSPSKEQKVVSNAKL-IIDVDEFNDNNNIILDKKDVEKLEINNNNNNN---N 413
Query: 325 QGNGNEN-EGRCKALCPRNTNPNNMIENG--KLNKKGRK-----ANSTAQKKYAKRDTNK 376
N N N + + + L N N NN N K NK+ K N KY + N+
Sbjct: 414 NNNDNNNLDTKEEELKENNNNNNNNNNNNNNKENKEEEKIECPICNIFIVSKYIEIHANE 473
Query: 377 GSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEIVDQH 436
+ E E + K +N + ++N T +P +A S+ +
Sbjct: 474 -----CLAKGEKEEKIFKMNHSNN---NNNNNNNGNTTNKSYLPK--MAYSL------MN 517
Query: 437 GKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTE 475
K + L T LG K D + ++ + NS+ +
Sbjct: 518 SKQLKDSL-TKLGLKTNGDRTALIKRHKEYITRYNSEVD 555
Score = 39 (18.8 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 20/102 (19%), Positives = 40/102 (39%)
Query: 220 HTETDAYITPP--DVPSFSDLKDSEDISSSELSPTAEVHGKSDGLDFFESEIFEWTQRAC 277
++E D+ P D+ S + E + +++ G +D +D + FE +
Sbjct: 551 NSEVDSLSPKPIFDITSELYQLEKEREKEKQKEKSSQYVGITDSID--REKHFEILKN-- 606
Query: 278 SPELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNAT 319
E+L + N K + S+T I+N ++T
Sbjct: 607 --EILNRNNNNNKKNNNNNNKSFQPTTTTSSTTTTITNSHST 646
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 211 EEDREKSSQHTETDAYI 227
E++REK Q ++ Y+
Sbjct: 573 EKEREKEKQKEKSSQYV 589
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 119 (46.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 6 SHL-EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHRREIR 64
SH+ + + EL+C IC AV+L C H FC+ CI + MK CP+C R++I+
Sbjct: 41 SHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPIC-----RKDIK 95
Query: 65 AAPH---MDNLVS 74
+ H +DN ++
Sbjct: 96 SKTHSLVLDNCIN 108
>UNIPROTKB|I3L7C9 [details] [associations]
symbol:BRCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000620 "positive regulation of histone H4-K16
acetylation" evidence=IEA] [GO:2000617 "positive regulation of
histone H3-K9 acetylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0044030 "regulation of DNA methylation"
evidence=IEA] [GO:0043009 "chordate embryonic development"
evidence=IEA] [GO:0035067 "negative regulation of histone
acetylation" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0007098 "centrosome
cycle" evidence=IEA] [GO:0006349 "regulation of gene expression by
genetic imprinting" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 EMBL:FP340289
Ensembl:ENSSSCT00000025436 Uniprot:I3L7C9
Length = 1865
Score = 143 (55.4 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 13 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 72
Query: 65 AAPHMDNLVS----VYKSMEVASGINIFVTQDESSTKSSGD 101
+ LV + + E+ +G+ F S K+ +
Sbjct: 73 ESTRFSQLVEELLKIIHAFELDTGLQ-FANNYNFSKKTENN 112
Score = 62 (26.9 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 58/305 (19%), Positives = 125/305 (40%)
Query: 207 WLRDEEDREKSSQ-HTETDAYITPPDVPSFSDLKDSEDISSSELSPTAEVH-GKSDGLDF 264
W+ +K ++ + +D +T D ++ ++E+ A+ H G S+ +D
Sbjct: 366 WITLNSSIQKVNEWFSRSDEMLTSDDSQDRRSESNTGVAGAAEVPNEADGHLGSSEKIDL 425
Query: 265 FESE----IFEWTQRACSPELLPSPAKTQVADAEENGKGL--EAALQGSNTVVD--ISNG 316
S+ + +R S PA++ + D + GK +A+L + V++ I
Sbjct: 426 MASDPHGALIRERERGHS-----KPAESNIED-KIFGKTYRRKASLPNLSHVIEDLILGA 479
Query: 317 NATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNK 376
+A Q N+ + K +P + I+ + T + +
Sbjct: 480 SAVEPQITQERPLTNKLKRKRRGTSGLDPEDFIKRADSAVVPKTPEKTIEGTDETEQNGQ 539
Query: 377 GS--TTPATSNEESENFVQKQTSIS-NAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEIV 433
G T+ NE VQK+ +++ A ++ + R AEPI ++ +++ E+
Sbjct: 540 GMNITSKGHENETKSGNVQKEKNVNPTASLGKEPAFR---ARAEPISSSI--SNMELEL- 593
Query: 434 DQHGKNIGSDLPTSLGKKQGSDEDLHFMK---TRKKCWKINSQTEEDFCTKSKR-RKVDS 489
+ HG S P + +++ S +H ++ R +++ + D C+ S+ +K +S
Sbjct: 594 NIHG----SKAPKNRLRRKSSTRQIHALELVVNRNPSPPSHTELQIDSCSSSEEMKKRNS 649
Query: 490 TEVNV 494
+V V
Sbjct: 650 DQVPV 654
Score = 54 (24.1 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 18/84 (21%), Positives = 37/84 (44%)
Query: 340 PRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSIS 399
P +++P+ + ++ +T++K A + K S P T N ES + + Q S+
Sbjct: 1421 PSHSSPSLIADSCAPEDLLNPEQNTSEKVKAVLTSEKSSDYPITQNPESLSADKFQVSLD 1480
Query: 400 NAKFSQKSSN-RRGTCAAEPIPDN 422
+ K S R + + + D+
Sbjct: 1481 RSTSKNKESGMERSSTSKSQLSDS 1504
Score = 53 (23.7 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 203 SPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSDLKDSEDISSSELSPTAEVHGKS 259
SP+ + D ++ S H TP D+ + +K++ + + S++ + V KS
Sbjct: 1119 SPYL-ISDNPEQPMGSSHASQICSETPDDLLNDDKIKENLNFAESDVKERSAVFSKS 1174
Score = 45 (20.9 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISN 400
RN++ + + KL+ +G K +T KK R + + P + N SI+N
Sbjct: 647 RNSDQVPVRHSKKLHLRGDKEPTTGAKKN-NRPHEQVNKRPISDAFPELNLTNVPVSITN 705
Query: 401 AKFSQK 406
S K
Sbjct: 706 CSNSNK 711
Score = 40 (19.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 563 SGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS 597
S +S++ + E +EG S + NE S GSS
Sbjct: 1017 STVSQNN-IQERTFKEGSSGSPNEVGSSTNEVGSS 1050
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 155 VAQYPLPETPTQPAKLEGGTVKNTTGELKSSSVVIRENP 193
+A PE P + VK KSS I +NP
Sbjct: 1429 IADSCAPEDLLNPEQNTSEKVKAVLTSEKSSDYPITQNP 1467
Score = 37 (18.1 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 397 SISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEIVDQHGKNIGSDLPTSLG 449
++S KF + + T E I N + + I ++ K S P +G
Sbjct: 989 NLSEEKFEEPKMSPERTMGNESIIPNTESTVSQNNIQERTFKEGSSGSPNEVG 1041
>UNIPROTKB|Q9C030 [details] [associations]
symbol:TRIM6 "Tripartite motif-containing protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0070206 "protein
trimerization" evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 EMBL:CH471064 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOVERGEN:HBG001357 HOGENOM:HOG000234134 OrthoDB:EOG4229JJ
eggNOG:NOG259921 KO:K11999 EMBL:AB039903 UniGene:Hs.729048
GermOnline:ENSG00000121236 EMBL:AF220030 EMBL:AK027664
EMBL:AK290172 EMBL:BC047564 IPI:IPI00552150 IPI:IPI00940053
RefSeq:NP_001003818.1 RefSeq:NP_001185573.1 RefSeq:NP_001185574.1
RefSeq:NP_477514.1 ProteinModelPortal:Q9C030 SMR:Q9C030
STRING:Q9C030 PhosphoSite:Q9C030 DMDM:25009488 PaxDb:Q9C030
PRIDE:Q9C030 Ensembl:ENST00000278302 Ensembl:ENST00000380097
GeneID:117854 KEGG:hsa:117854 UCSC:uc001mbc.2 UCSC:uc001mbd.3
CTD:117854 GeneCards:GC11P005617 HGNC:HGNC:16277 MIM:607564
neXtProt:NX_Q9C030 PharmGKB:PA38110 OMA:CNCVIPM ChiTaRS:TRIM6
GenomeRNAi:117854 NextBio:80243 ArrayExpress:Q9C030 Bgee:Q9C030
Genevestigator:Q9C030 Uniprot:Q9C030
Length = 488
Score = 140 (54.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +S+ C H FC ACI +S+ + G +CPVC+ Y +R
Sbjct: 12 EVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPN 71
Query: 67 PHMDNLVSVYKSMEVASGINI-FVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ N+V + + + G + V + K L C G+ + C+ EH+G
Sbjct: 72 RHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQ--LFCQEDGKVICWLCERSQEHRG 127
Score = 48 (22.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 20/95 (21%), Positives = 43/95 (45%)
Query: 431 EIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEEDFCTKSKRRKVDST 490
E+ ++ + L ++Q +++ F++ +K WK +Q E + C ++ T
Sbjct: 135 EVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWK--NQMEPERC------RIQ-T 185
Query: 491 EVNVLENV--SVVQKKTYKDTVPQPSLIPTFEDAD 523
E N L N+ V Q++ K + + E+A+
Sbjct: 186 EFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAE 220
Score = 45 (20.9 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 472 SQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
+Q+ + + +RR ST + +L++VS V +++ T+ +P +PT
Sbjct: 227 TQSLRELISDLERRCQGST-MELLQDVSDVTERSEFWTLRKPEALPT 272
>MGI|MGI:2137352 [details] [associations]
symbol:Trim6 "tripartite motif-containing 6" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070206 "protein
trimerization" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2137352
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 CTD:117854
EMBL:AK033396 EMBL:AK049238 EMBL:BC138965 EMBL:AF220031
IPI:IPI00407811 RefSeq:NP_001013637.1 UniGene:Mm.274843
ProteinModelPortal:Q8BGE7 SMR:Q8BGE7 PhosphoSite:Q8BGE7
PRIDE:Q8BGE7 Ensembl:ENSMUST00000098180 GeneID:94088 KEGG:mmu:94088
UCSC:uc009ivq.1 eggNOG:NOG238217 InParanoid:B2RSQ8 OMA:KSQMEPE
NextBio:352065 Bgee:Q8BGE7 CleanEx:MM_TRIM6 Genevestigator:Q8BGE7
Uniprot:Q8BGE7
Length = 488
Score = 137 (53.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 33/117 (28%), Positives = 54/117 (46%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +S+ C H FC CI+ + + S+CPVC+ Y +R
Sbjct: 12 EVTCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSSCPVCRTSYQPGNLRPN 71
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ +V + + + G + V + L C G+ + C+ EH+G
Sbjct: 72 RHLAAIVKRLREVALCPGKQLEVIFCALHGEKL-QLFCKEDGKLICWLCERSQEHRG 127
Score = 51 (23.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 472 SQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
SQ+ +D + + R ST V +L++V V K++ T+ +P +PT
Sbjct: 227 SQSLKDLISDLEHRCQGST-VELLQDVGDVTKRSEFWTLRKPQALPT 272
>UNIPROTKB|F1RJD9 [details] [associations]
symbol:LOC100738479 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR000679 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50114
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 OMA:ACITQNS EMBL:CU856599
Ensembl:ENSSSCT00000016023 Uniprot:F1RJD9
Length = 831
Score = 152 (58.6 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKS-----MKSG--SNCPVCKVPYHRREIRAA 66
E+ CP+CL LL+ +S+ C H FC ACI ++ M G S+CPVC+ Y +R
Sbjct: 40 EVTCPLCLELLTDPLSIDCGHSFCQACITQNSEEWRMDQGGESSCPVCQTRYRPGNLRPN 99
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ N+ + + + SG + V + L C G+ + C+ EH+G
Sbjct: 100 RHLANIAERLREVVLGSGTQLKVILCAHHGEKL-QLFCREDGQLICWLCERAQEHRG 155
Score = 47 (21.6 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 709 EKTCRKSFHVPCAKLILQCRWDTDNFVMLC 738
E CRK H KL+L CR D + F + C
Sbjct: 437 EDLCRK--HGK--KLLLLCREDREVFCLCC 462
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 472 SQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
SQ+ + + +RR + +L++V V +++ T+ +P +PT
Sbjct: 255 SQSLRELISDLERR-CQGSMTELLQDVRDVAERSEFWTLKKPEALPT 300
>UNIPROTKB|O00635 [details] [associations]
symbol:TRIM38 "Tripartite motif-containing protein 38"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IMP] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007165 "signal transduction" evidence=IMP] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:U91328 HOGENOM:HOG000234133 HOVERGEN:HBG001357 CTD:10475
eggNOG:NOG271582 KO:K12014 OrthoDB:EOG495ZRS EMBL:U90547
EMBL:BC026930 IPI:IPI00007365 RefSeq:NP_006346.1 UniGene:Hs.584851
UniGene:Hs.742026 ProteinModelPortal:O00635 SMR:O00635
IntAct:O00635 MINT:MINT-232573 STRING:O00635 PhosphoSite:O00635
PRIDE:O00635 DNASU:10475 Ensembl:ENST00000349458
Ensembl:ENST00000357085 Ensembl:ENST00000540262 GeneID:10475
KEGG:hsa:10475 UCSC:uc003nfm.3 GeneCards:GC06P025966
HGNC:HGNC:10059 HPA:HPA031685 neXtProt:NX_O00635 PharmGKB:PA35532
InParanoid:O00635 OMA:KMMEEAT PhylomeDB:O00635 GenomeRNAi:10475
NextBio:39730 Bgee:O00635 CleanEx:HS_TRIM38 Genevestigator:O00635
GermOnline:ENSG00000112343 Uniprot:O00635
Length = 465
Score = 146 (56.5 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 34/121 (28%), Positives = 53/121 (43%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---------CPVCKVPYH 59
+KM E C ICLSL+++ VS+ C H +C+ CI K+ S CP C+ P+H
Sbjct: 8 KKMMEEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFH 67
Query: 60 RREIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQ 119
+R + +L+ K + Q + G LIC C+ +H+
Sbjct: 68 MDSLRPNKQLGSLIEALKETDQEMSCEEHGEQFHLFCEDEGQLICWR-----CERAPQHK 122
Query: 120 G 120
G
Sbjct: 123 G 123
Score = 40 (19.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 16/55 (29%), Positives = 21/55 (38%)
Query: 272 WTQRACSPE---LLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIF 323
WT R C + L SP + + G+ + VV NGN C IF
Sbjct: 383 WTLRLCKKKGYVALTSPPTSLHLHEQPLLVGIFLDYEAG--VVSFYNGNTGCHIF 435
>UNIPROTKB|G3XAC3 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_l"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
ProteinModelPortal:G3XAC3 SMR:G3XAC3 PRIDE:G3XAC3
Ensembl:ENST00000351666 ArrayExpress:G3XAC3 Bgee:G3XAC3
Uniprot:G3XAC3
Length = 680
Score = 139 (54.0 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLV 73
+ LV
Sbjct: 75 ESTRFSQLV 83
Score = 52 (23.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 29/142 (20%), Positives = 54/142 (38%)
Query: 382 ATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEIVDQHGKNIG 441
A S ESE V + S +++ ++ +R T I A + +++QHG
Sbjct: 185 AASGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEA-VLEQHGSQPS 243
Query: 442 SDLPTSLGKKQGSDEDLHF--MKTRKKCWKINSQTEEDFCTKSKRRKVDSTEVNVLENVS 499
+ P+ + EDL T +K + SQ ++ + + + V + S
Sbjct: 244 NSYPSIISDSSAL-EDLRNPEQSTSEKA-VLTSQKSSEYPISQNPEGLSADKFEVSADSS 301
Query: 500 VVQKKTYKDTVPQPSLIPTFED 521
+ K PS P+ +D
Sbjct: 302 TSKNKEPGVERSSPSKCPSLDD 323
Score = 43 (20.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 14/66 (21%), Positives = 28/66 (42%)
Query: 571 VGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQCSFCHS 630
+GE+ GC S + ++ G+ SDI ++ Q ++ + +A H
Sbjct: 182 LGEAA--SGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEAVLEQHG 239
Query: 631 SENSEA 636
S+ S +
Sbjct: 240 SQPSNS 245
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 564 GISKDGLVGESKVQEGCSSTANET 587
G + G E+ V E CS ++++
Sbjct: 183 GEAASGCESETSVSEDCSGLSSQS 206
>ZFIN|ZDB-GENE-060503-670 [details] [associations]
symbol:trim108 "tripartite motif containing 108"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-670 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 HOGENOM:HOG000123639 HOVERGEN:HBG096489
EMBL:BC115297 IPI:IPI00759157 UniGene:Dr.81002
ProteinModelPortal:Q1RLT3 InParanoid:Q1RLT3 Uniprot:Q1RLT3
Length = 523
Score = 141 (54.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG---SNCPVCKVPYHRREIRAAPHMD 70
E+KC +CLS + V+L+C H FC CI M++ S CP C+ PY+ ++++A+ +
Sbjct: 37 EIKCSVCLSDFTDPVTLSCEHSFCRQCITGHMQASLGPSACPECQKPYNEKDLKASRLLR 96
Query: 71 NLVSVYKSMEVASGINIFVTQDESSTKSSGD----LICGE 106
N+ S + + Q+ + T D L+C E
Sbjct: 97 NMTSTVRGHLAEQKSDRSTPQEGTQTLKLADMEKMLMCSE 136
>UNIPROTKB|Q1ACD7 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:61853 "Nomascus leucogenys" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899858 EMBL:AY899852 EMBL:AY899853
EMBL:AY899854 EMBL:AY899855 EMBL:AY899856 EMBL:AY899857
EMBL:DQ229283 ProteinModelPortal:Q1ACD7 SMR:Q1ACD7 Uniprot:Q1ACD7
Length = 494
Score = 149 (57.5 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K+ +CPVC++ Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDEGERSCPVCRISYQHK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 NIQPNRHVANIVEKLREVKLS 86
Score = 37 (18.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 214 RE-KSSQHTETDAYITPPDVPSFSDL-KDSEDISSSELSPTAEVHG 257
RE + QH D + P ++ S++ + +D +SS E E G
Sbjct: 290 RELRDVQHYWVDVTVAPNNI-SYAVISEDMRQVSSPEPQIIYEAQG 334
>UNIPROTKB|G3V7X7 [details] [associations]
symbol:Bard1 "BRCA1 associated RING domain 1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=IEA] [GO:0042325 "regulation of phosphorylation"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046826 "negative regulation
of protein export from nucleus" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0070531 "BRCA1-A
complex" evidence=IEA] [GO:0085020 "protein K6-linked
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50089
SMART:SM00184 SMART:SM00248 InterPro:IPR001357 RGD:621072
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00550000074487 InterPro:IPR017907
OMA:KKNSIKM UniGene:Rn.48735 EMBL:CH474044
Ensembl:ENSRNOT00000020414 Uniprot:G3V7X7
Length = 768
Score = 126 (49.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 5 RSHLEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREI 63
R+ L ++ + L+C C ++L V L C H+FC+ CI + GS CPVC P ++
Sbjct: 32 RAALARLEKLLRCSRCANILREPVCLGGCEHIFCSGCISDCV--GSGCPVCHTPAWILDL 89
Query: 64 RAAPHMDNLVSVYKSME 80
+ +D+++ +Y ++
Sbjct: 90 KINRQLDSMIQLYSKLQ 106
Score = 66 (28.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 131 SKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTGELKSSSVVIR 190
SK+ P VC + CP P PT +K G V +T+GE++ ++ +
Sbjct: 288 SKSEEAPEKKVCVEDRCPVGSDGNPKGCHRP--PTSTSKKCGSNVPSTSGEIREPTL-LA 344
Query: 191 ENPVI 195
EN V+
Sbjct: 345 ENVVL 349
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 136 (52.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC CI+ +++SG+ CP C K +R +R P+ D
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 108 ALISKIYPSRD 118
>UNIPROTKB|Q6J6I9 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9544 "Macaca mulatta" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730
KO:K10605 InterPro:IPR025994 Pfam:PF12820 EMBL:AY589041
EMBL:AF019078 EMBL:U44730 PIR:G02999 RefSeq:NP_001108421.1
UniGene:Mmu.17471 ProteinModelPortal:Q6J6I9 SMR:Q6J6I9
STRING:Q6J6I9 GeneID:712634 KEGG:mcc:712634 InParanoid:Q6J6I9
NextBio:19972539 Uniprot:Q6J6I9
Length = 1863
Score = 139 (54.0 bits), Expect = 6.8e-06, Sum P(5) = 6.8e-06
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLV 73
+ LV
Sbjct: 75 ESTRFSQLV 83
Score = 55 (24.4 bits), Expect = 6.8e-06, Sum P(5) = 6.8e-06
Identities = 33/129 (25%), Positives = 59/129 (45%)
Query: 287 KTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALCP------ 340
K V+D EE G GLE Q +V D + G A + + +E+ R +
Sbjct: 1338 KELVSDDEERGTGLEEDNQEEQSV-DSNLGEAASGYESETSVSEDCSRLSSQSEILTTQQ 1396
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGST-TPATSNEESENFVQKQTSIS 399
R+T +N+I KL ++ + + ++ ++ + S T +++ E+ N ++ TS
Sbjct: 1397 RDTMQDNLI---KLQQEMAELEAVLEQHGSQPSNSYPSIITDSSALEDLRN-PEQSTSEK 1452
Query: 400 NAKFSQKSS 408
SQKSS
Sbjct: 1453 AVLTSQKSS 1461
Score = 53 (23.7 bits), Expect = 3.1e-05, Sum P(5) = 3.1e-05
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 744 SNLPNENPGSQESRKKCISKKLLTQHNKVAFKSDISTNSWQSWENKLVLCCSALT--VGE 801
SN+P++ +C+SK T+ N ++ K NS N+++L ++ + E
Sbjct: 1235 SNIPSQTTRHSTVATECLSKN--TEENLLSLK-----NSLTDCSNQVILAKASQEHHLSE 1287
Query: 802 QVYCTDTIF 810
+ C+ ++F
Sbjct: 1288 ETKCSGSLF 1296
Score = 52 (23.4 bits), Expect = 6.8e-06, Sum P(5) = 6.8e-06
Identities = 13/66 (19%), Positives = 29/66 (43%)
Query: 194 VINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSDLKDSEDISSSELSPTA 253
++ T SP + D ++ S H TP D+ ++K+ +++++ ++
Sbjct: 1116 LVQTVNTDFSPCL-ISDNLEQPMGSSHASEVCSETPDDLLDDGEIKEDTSFAANDIKESS 1174
Query: 254 EVHGKS 259
V KS
Sbjct: 1175 AVFSKS 1180
Score = 50 (22.7 bits), Expect = 3.1e-05, Sum P(5) = 3.1e-05
Identities = 21/79 (26%), Positives = 33/79 (41%)
Query: 353 KLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQ----KQTSISNAKFSQKSS 408
K NK + NS +R + P+T + S N ++ K+ S SN S+
Sbjct: 992 KCNKNLLEENSEEHSVSPERAVGNENIIPSTVSTISHNNIRENAFKEASSSNINEVGSST 1051
Query: 409 NRRGTCAAE--PIPDNVLA 425
N G+ E P +N+ A
Sbjct: 1052 NEVGSSINEVGPSDENIQA 1070
Score = 46 (21.3 bits), Expect = 6.8e-06, Sum P(5) = 6.8e-06
Identities = 20/81 (24%), Positives = 31/81 (38%)
Query: 68 HMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQ---VTGGCQDKVEHQGTSKG 124
++ N V K A N ++E +T S+ +Q VT C+ K E+QG K
Sbjct: 855 YLQNTFKVSKRQSFALFSNPGNPEEECATFSAHSRSLKKQSPKVTSECEQKEENQG-KKE 913
Query: 125 KRFRRTSKATVEPS-GTVCTK 144
+ + VC K
Sbjct: 914 SNIKPVQTVNITAGFSVVCQK 934
Score = 40 (19.1 bits), Expect = 6.8e-06, Sum P(5) = 6.8e-06
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 743 SSNLP-NENPGSQESRKKCISKKLLTQHNKVAFKSDISTNSWQSWENK 789
SS P N+NP + K +S T NK S + QS E++
Sbjct: 1460 SSEYPINQNPEGLSADKFEVSADSSTSKNKEPGVERSSPSKCQSLEDR 1507
Score = 38 (18.4 bits), Expect = 3.8e-05, Sum P(5) = 3.8e-05
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 180 GELKSSSVVIRENPVINK 197
G L + S +++E P+ NK
Sbjct: 483 GALVTESQIMQERPLTNK 500
Score = 38 (18.4 bits), Expect = 0.00026, Sum P(5) = 0.00026
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 564 GISKDGLVGESKVQEGCSSTANETQ 588
G + G E+ V E CS +++++
Sbjct: 1366 GEAASGYESETSVSEDCSRLSSQSE 1390
Score = 37 (18.1 bits), Expect = 3.1e-05, Sum P(5) = 3.1e-05
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 568 DGLVGESKVQEGCSSTANETQSPEGVRGSS 597
D L+ + +++E S AN+ + V S
Sbjct: 1151 DDLLDDGEIKEDTSFAANDIKESSAVFSKS 1180
>UNIPROTKB|G3V8S5 [details] [associations]
symbol:Brca1 "RCG34321, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IEA]
[GO:0007098 "centrosome cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035067 "negative
regulation of histone acetylation" evidence=IEA] [GO:0043009
"chordate embryonic development" evidence=IEA] [GO:0044030
"regulation of DNA methylation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0070512 "positive regulation of
histone H4-K20 methylation" evidence=IEA] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=IEA] [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 RGD:2218 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
EMBL:CH473948 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
OMA:CMLKLLN Ensembl:ENSRNOT00000028109 Uniprot:G3V8S5
Length = 1817
Score = 152 (58.6 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 110/508 (21%), Positives = 200/508 (39%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 LHAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQ 74
Query: 65 AAPHMDNLVS----VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQG 120
+ LV + + E+ +G+ S K+S + E + V ++
Sbjct: 75 GSARFSQLVEELLKIIDAFELDTGMQCANGFSFSKKKNSSSELLNEDAS--IIQSVGYRN 132
Query: 121 TSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTG 180
K R + AT++ S +V + + ++ + P+ + LE + +
Sbjct: 133 RVKKLRQIESGSATLKDSLSVQLS-NLGIVRSMKKNRQTQPQNKSVYIALESDSSEERVN 191
Query: 181 ELKSSSVVIRENPVI-----NKEGTVLSPFFWLRDEEDREKSSQHTE-TDAYITPPDVPS 234
SV +E I EG + S D + ++ +H + +D + P +
Sbjct: 192 APDGCSVRDQELFQIAPGGAGDEGKLNSAKKAACDFSEGIRNIEHHQCSDKDLNPTE--- 248
Query: 235 FSDLKDSEDISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVAD-A 293
+ + +S A VH + G D S + T+ E K + D +
Sbjct: 249 -NHATERHPEKCPRIS-VANVHVEPCGTDARASSLQRGTRSLLFTEDRLDAEKAEFCDRS 306
Query: 294 EENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNEN-EGRC--------KALCPRNTN 344
+++G + + +++ + NG V +G + N + C K+LCP N+
Sbjct: 307 KQSGAAVSQQSRWADSK-ETCNGRP--VPRTEGKADPNVDSLCGRKQWNHPKSLCPENSG 363
Query: 345 PNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFS 404
+ LN +K N + ++ S SN E+ ++ + FS
Sbjct: 364 ATTDVPWITLNSSIQKVNEWFSRTGEMLTSDNASDRRPASNAEAAVVLEVSNEVDGC-FS 422
Query: 405 QKSSNRRGTCAAEPIPDN-VLAASVRTEIVDQHGKNIGSDLPTSLGK---KQGSDEDLHF 460
SS + A P DN V+ S R + +NI +D GK ++GS L+
Sbjct: 423 --SSKKIDLVA--PDSDNAVMCTSGRD--FSKPVENIIND--KIFGKTYQRKGSRPHLNH 474
Query: 461 MKTRKKCWKINSQT--EEDFCTKSKRRK 486
+ + Q E+ F K KR++
Sbjct: 475 VTEIIGTFTTEPQIIQEQPFTNKLKRKR 502
Score = 51 (23.0 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 742 TSSNLPNENPGSQESRKKCISK 763
TS N+ NENP SQ ++ C K
Sbjct: 1413 TSKNI-NENPVSQNPKRACDDK 1433
Score = 43 (20.2 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 758 KKCISKKLLTQHNKVAFKSDISTNSWQSWENKLVLCCSALTVGEQVYCTD 807
K +KLL+ H + K D+ T S + L G Q+YC +
Sbjct: 1667 KSIQERKLLSVH-EFEVKGDVVTGSNHQGPRRSRESQEKLFEGLQIYCCE 1715
Score = 42 (19.8 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 718 VPCAKLILQCRWDTDNFVMLCPLHTSSNLPNENPGSQESRKKCIS 762
+PC + +L R + + C + +P + G+Q RK IS
Sbjct: 1187 LPCFQHLLS-RVSSTPELTRCSSVVTQRVPEKAKGTQAPRKSSIS 1230
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC CI+ +++SG+ CP C K +R +R P+ D
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 108 ALISKIYPSRD 118
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC CI+ +++SG+ CP C K +R +R P+ D
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 108 ALISKIYPSRD 118
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC CI+ +++SG+ CP C K +R +R P+ D
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 108 ALISKIYPSRD 118
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC CI+ +++SG+ CP C K +R +R P+ D
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 108 ALISKIYPSRD 118
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC CI+ +++SG+ CP C K +R +R P+ D
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 108 ALISKIYPSRD 118
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC CI+ +++SG+ CP C K +R +R P+ D
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 108 ALISKIYPSRD 118
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC CI+ +++SG+ CP C K +R +R P+ D
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 108 ALISKIYPSRD 118
>UNIPROTKB|A6NK02 [details] [associations]
symbol:TRIM75 "Putative tripartite motif-containing protein
75" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG001357
OrthoDB:EOG4NP73C EMBL:AC108465 IPI:IPI00398090
ProteinModelPortal:A6NK02 SMR:A6NK02 PaxDb:A6NK02 PRIDE:A6NK02
GeneCards:GC04P165980 HGNC:HGNC:32686 neXtProt:NX_A6NK02
eggNOG:NOG254111 InParanoid:A6NK02 NextBio:104801 CleanEx:HS_TRIM75
Genevestigator:A6NK02 Uniprot:A6NK02
Length = 468
Score = 138 (53.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 69/264 (26%), Positives = 108/264 (40%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKS---MKSGSNCPVCKVPYHRREIRAAPHMD 70
E KC ICL LS V++ C H FC +CI +S ++ CPVC+ R+ +
Sbjct: 13 EAKCSICLDYLSDPVTIECGHNFCRSCIQQSWLDLQELFPCPVCRHQCQEGHFRSNTQLG 72
Query: 71 NLVSVYKSMEVASGINIFVTQDESSTKSSGDL--ICGEQVT---GGCQDKVEHQGTSKGK 125
++ + K ++ + K + L C E + C +HQG
Sbjct: 73 RMIEIAKLLQSTKSNKRKQEETTLCEKHNQPLSVFCKEDLMVLCPLCTQPPDHQG----H 128
Query: 126 RFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTGELKSS 185
R KA + C+ P KK++ Q + +P +L V+N EL S
Sbjct: 129 HVRPIEKAAIHYRKRFCSYIQ-PLKKQLADLQKLISTQSKKPLELRE-MVENQRQELSSE 186
Query: 186 SVVIRENPVINKEG-TVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSDLKDSEDI 244
+ N +++E VLS L +EE K +Q + A IT ++S S+
Sbjct: 187 FEHL--NQFLDREQQAVLSR---LAEEE---KDNQQ-KLSANITA--FSNYSATLKSQLS 235
Query: 245 SSSELSPTAEVHGKSDGLDFFESE 268
ELS +E+ S F+ESE
Sbjct: 236 KVVELSELSELELLSQIKIFYESE 259
>UNIPROTKB|G5E5Y3 [details] [associations]
symbol:G5E5Y3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
GeneTree:ENSGT00690000101646 EMBL:DAAA02040903
Ensembl:ENSBTAT00000040169 Uniprot:G5E5Y3
Length = 470
Score = 138 (53.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN-------CPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H FC ACI + N CPVC++ Y +R
Sbjct: 12 EVTCPICLQLLTEPLSLDCGHSFCQACITANNLVSMNDQDEDRRCPVCRISYEPGNLRPN 71
Query: 67 PHMDNLVSVYKSMEVA 82
H+ N+V + ++++
Sbjct: 72 RHVANIVQRLREVKLS 87
>RGD|1305795 [details] [associations]
symbol:Trim21 "tripartite motif-containing 21" species:10116
"Rattus norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA;ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0045787
"positive regulation of cell cycle" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070206 "protein
trimerization" evidence=IEA;ISO] [GO:0090086 "negative regulation
of protein deubiquitination" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643
PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 RGD:1305795 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0019005
GO:GO:0032088 GO:GO:0004842 GO:GO:0000209 GO:GO:0070206
InterPro:IPR017907 GO:GO:0051865 GO:GO:0045787 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0031648
GO:GO:0006513 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 GO:GO:0090086 GeneTree:ENSGT00690000101646
OrthoDB:EOG4KWJSP IPI:IPI00359044 Ensembl:ENSRNOT00000024992
UCSC:RGD:1305795 Uniprot:D4ACF2
Length = 474
Score = 138 (53.6 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK-SMKSGSNCPVCKVPYHRREIRAA 66
LEKM E+ C ICL + +S+ C H FC CI + G +CPVC+ + R +R
Sbjct: 11 LEKMWEEVTCSICLEPMVEPMSIECGHCFCKECISEVGGNGGGSCPVCRQHFLLRNLRPN 70
Query: 67 PHMDNLVSVYK 77
H+ N+V K
Sbjct: 71 RHIANMVENLK 81
>UNIPROTKB|E7EN90 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007420 GO:GO:0032355 GO:GO:0005759
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000794 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00945744 SMR:E7EN90
Ensembl:ENST00000461221 Ensembl:ENST00000461798 Uniprot:E7EN90
Length = 63
Score = 115 (45.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPV 53
+ M + L+CPICL L+ VS C+H+FC C++K + K G S CP+
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPL 63
>UNIPROTKB|G3MWZ9 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 Ensembl:ENSBTAT00000063426
Uniprot:G3MWZ9
Length = 844
Score = 147 (56.8 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 38/117 (32%), Positives = 57/117 (48%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSG-SNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +S+ C H FC ACI +SM + G S CPVC+ Y +R
Sbjct: 40 EVTCPICLELLTEPLSIDCGHSFCQACITADNKESMPGQEGQSRCPVCQTSYWLGNLRPN 99
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLIC---GEQVTGGCQDKVEHQG 120
H+ N+ + + + SG + V + L C G+ + C+ EH+G
Sbjct: 100 RHLANIAERLREVVLGSGKQLKVILCVHHGEKL-QLFCEEDGKLICWLCERSQEHRG 155
Score = 125 (49.1 bits), Expect = 0.00051, P = 0.00051
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVK-----SMKSGSNCPVCKVPYHRREIRAAPH 68
E+ CPIC LL+ +SL C H FC CI S+ S+CPVC Y + H
Sbjct: 368 EVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGGDSSCPVCGTQYSLGNLWPNLH 427
Query: 69 MDNLVSVYKSMEVA 82
+ N+V + ++++
Sbjct: 428 LANIVERLRKVKLS 441
Score = 43 (20.2 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 472 SQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
SQ+ + + + R + +L++VS V K++ T+ +P +PT
Sbjct: 255 SQSLRELISDLEHR-CQGSATELLQDVSDVAKRSEFWTLKKPEALPT 300
>UNIPROTKB|Q5C8U4 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:60710 "Chlorocebus pygerythrus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY740612 ProteinModelPortal:Q5C8U4
SMR:Q5C8U4 Uniprot:Q5C8U4
Length = 515
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS-------NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H C ACI + K +CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTEPLSLPCGHSLCQACITANHKESMLYKEEERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>MGI|MGI:1915968 [details] [associations]
symbol:Rnf166 "ring finger protein 166" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
MGI:MGI:1915968 Prosite:PS00518 Pfam:PF05605 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
PROSITE:PS50330 InterPro:IPR017907 InterPro:IPR008598
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 CTD:115992 eggNOG:NOG149065 OrthoDB:EOG4DJJX8
OMA:LVKHCVD EMBL:AK151813 IPI:IPI00355332 RefSeq:NP_001028314.1
UniGene:Mm.34356 UniGene:Mm.458434 ProteinModelPortal:Q3U9F6
SMR:Q3U9F6 PhosphoSite:Q3U9F6 PRIDE:Q3U9F6
Ensembl:ENSMUST00000014614 GeneID:68718 KEGG:mmu:68718
InParanoid:Q3U9F6 NextBio:327750 Bgee:Q3U9F6 CleanEx:MM_RNF166
Genevestigator:Q3U9F6 GermOnline:ENSMUSG00000014470 Uniprot:Q3U9F6
Length = 237
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 14 ELKCPICLSLLSSAVSL-TCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAAPHMDN 71
+ CPICL + V++ +C H FC C+ ++ S CP+C++P+ +++ A H++
Sbjct: 30 QFSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKATHVEK 89
Query: 72 LVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSK 123
+S YK+ G N VT + S L EQ+ C V TS+
Sbjct: 90 QLSSYKAP--CRGCNKKVTLAKMRAHISSCLKVQEQMAN-CPKFVPVVPTSQ 138
>RGD|1302950 [details] [associations]
symbol:Rnf166 "ring finger protein 166" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
RGD:1302950 Prosite:PS00518 Pfam:PF05605 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
PROSITE:PS50330 InterPro:IPR017907 InterPro:IPR008598
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 CTD:115992 eggNOG:NOG149065 OrthoDB:EOG4DJJX8
OMA:LVKHCVD EMBL:AY606065 EMBL:BC100057 IPI:IPI00197564
RefSeq:NP_001002279.1 UniGene:Rn.43927 ProteinModelPortal:Q6J1I7
SMR:Q6J1I7 Ensembl:ENSRNOT00000018591 GeneID:365022 KEGG:rno:365022
UCSC:RGD:1302950 InParanoid:Q6J1I7 NextBio:686491
Genevestigator:Q6J1I7 GermOnline:ENSRNOG00000013777 Uniprot:Q6J1I7
Length = 237
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 14 ELKCPICLSLLSSAVSL-TCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAAPHMDN 71
+ CPICL + V++ +C H FC C+ ++ S CP+C++P+ +++ A H++
Sbjct: 30 QFSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKATHVEK 89
Query: 72 LVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSK 123
+S YK+ G N VT + S L EQ+ C V TS+
Sbjct: 90 QLSSYKAP--CRGCNKKVTLAKMRAHISSCLKVQEQMAN-CPKFVPVVPTSQ 138
>UNIPROTKB|F1LUN6 [details] [associations]
symbol:F1LUN6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
IPI:IPI00562660 Ensembl:ENSRNOT00000032989 Uniprot:F1LUN6
Length = 167
Score = 120 (47.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRRE---- 62
L +M + C IC L A ++T C H FC +CIVK + + CP C + H +
Sbjct: 49 LSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFEHSNRCPKCNIIVHEAKPHNN 108
Query: 63 IRAAPHMDNLVSVYK 77
+R P + N+V YK
Sbjct: 109 LRMDPQLQNIV--YK 121
>UNIPROTKB|Q95153 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:0005694
"chromosome" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005694
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
GO:GO:0006633 GO:GO:0007049 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496 PANTHER:PTHR13763
CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605
OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820 EMBL:U50709
RefSeq:NP_001013434.1 UniGene:Cfa.140 ProteinModelPortal:Q95153
SMR:Q95153 STRING:Q95153 GeneID:403437 KEGG:cfa:403437
InParanoid:Q95153 NextBio:20816955 Uniprot:Q95153
Length = 1878
Score = 148 (57.2 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 46/190 (24%), Positives = 90/190 (47%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM---KSGSNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K S CP+CK +R ++
Sbjct: 15 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS----VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQG 120
+ LV + + E+ +G+ + + S +++ E+V+ ++ G
Sbjct: 75 ESTRFSQLVEELLKIIHAFELDTGLQFADSYNFSKKENNSPEHLKEEVS-----IIQSMG 129
Query: 121 -TSKGKRFRRTS--KATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKN 177
++ KR R++ T+E S +V + + ++ Q P+ + +L + ++
Sbjct: 130 YRNRAKRLRQSEPENPTLETSLSVQLS-NLGIVRSLRTKQQIQPQNKSVYIELGSDSSED 188
Query: 178 TTGELKSSSV 187
T + S SV
Sbjct: 189 TVNKASSCSV 198
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 25/78 (32%), Positives = 33/78 (42%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTA--QKKYAKRDTNKGSTTPATSNEESENFVQKQTSIS 399
N P N E G +K + AN T +K+ A R T + SN E E +
Sbjct: 548 NNGPENETE-GDYVQKEKNANPTESLEKESAFR-TKTEPMSSRISNMELELNSSSSKAPK 605
Query: 400 NAKFSQKSSNRRGTCAAE 417
+ +KSS R TCA E
Sbjct: 606 KNRLRRKSSARH-TCALE 622
Score = 49 (22.3 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 597 SDIGVLEKLHKTQRGALRKCETLAHKIQCSFCHSSENSEASGEMVH 642
+D G + + + LRK +T++++ Q + C + EN + E +H
Sbjct: 773 TDYGTQDSISLLEADTLRKAKTVSNQ-QANLCATIENPK---EPIH 814
Score = 49 (22.3 bits), Expect = 5.4e-05, Sum P(5) = 5.4e-05
Identities = 29/140 (20%), Positives = 59/140 (42%)
Query: 371 KRDTNK-GSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVR 429
KRD + T NE ++VQK+ + + + +K S R EP+ + +++
Sbjct: 538 KRDGHVINITNNGPENETEGDYVQKEKNANPTESLEKESAFR--TKTEPMSSRI--SNME 593
Query: 430 TEIVDQHGKNIGSDLPTSLGKKQGSDED--LHFMKTRKKCWKINSQTEEDFCTKS---KR 484
E+ K + L +K + L F+ R +S+ + + C+ S K+
Sbjct: 594 LELNSSSSK---APKKNRLRRKSSARHTCALEFVVNRNLNPPDHSELQIESCSSSEEMKK 650
Query: 485 RKVDSTEVNVLENVSVVQKK 504
+ +D V + + ++Q K
Sbjct: 651 QHLDQVPVRHNKTLQLMQDK 670
Score = 45 (20.9 bits), Expect = 2.8e-05, Sum P(5) = 2.8e-05
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 571 VGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRG 611
VG S V E SST NE S GSS + +L + RG
Sbjct: 1039 VGSSSVNEVVSST-NEVGSSVNEVGSSGENIQAELGRN-RG 1077
Score = 41 (19.5 bits), Expect = 0.00069, Sum P(5) = 0.00069
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 395 QTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEIVDQHGKNIGS 442
Q ++S KF Q S + E + + ++ + I + K +GS
Sbjct: 994 QENLSEEKFEQHSMSPERAVGNERVIQSTVSTISQNNIRECASKEVGS 1041
Score = 40 (19.1 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 762 SKKLLTQHNKVAFKSDISTNSWQ 784
S LLT+H K++I NS Q
Sbjct: 285 SSLLLTKHRMNVEKAEICNNSKQ 307
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 253 AEVHGKSDGLDFFESEIFEWTQ--RACSPELLPSPAKTQVADAE 294
AE+ S S+ W + C+ +PS K V +A+
Sbjct: 299 AEICNNSKQPGLARSQQSRWAESKETCNDRQIPSTEKKVVVNAD 342
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 682 NLEAELARSRRIXXXXXXXXXXXXXXYEKTCRKSFHVP-CAKLILQCRWDTDNFVMLCPL 740
N++AEL R+R + C++S + C ++ + ++ V+
Sbjct: 1067 NIQAELGRNR---GPKLNAMLRLGLMQPEVCKQSLSLSNCKHPEMKWQGQSEGAVLSVSA 1123
Query: 741 HTSSNLPNENP----GSQESRKKCISKK--LLTQHN---KVAF-KSDISTNS 782
S L ++NP GS S + C LL KV+F +SDI S
Sbjct: 1124 DFSPCLISDNPEQPMGSSRSSQVCSETPDDLLNGDKIKGKVSFAESDIKEKS 1175
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/52 (19%), Positives = 21/52 (40%)
Query: 208 LRDEEDREKSSQHTETDAYITPPDVPSFSDLKDSEDISSSELSPTAEVHGKS 259
+ D ++ S + TP D+ + +K + S++ + V KS
Sbjct: 1130 ISDNPEQPMGSSRSSQVCSETPDDLLNGDKIKGKVSFAESDIKEKSAVFSKS 1181
Score = 37 (18.1 bits), Expect = 8.9e-05, Sum P(4) = 8.9e-05
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 571 VGESKVQEGCSSTANETQSPEGVRG 595
+G S+ + CS T ++ + + ++G
Sbjct: 1138 MGSSRSSQVCSETPDDLLNGDKIKG 1162
>UNIPROTKB|Q5D7H7 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9519 "Lagothrix lagotricha" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843520
ProteinModelPortal:Q5D7H7 SMR:Q5D7H7 Uniprot:Q5D7H7
Length = 547
Score = 144 (55.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 39/128 (30%), Positives = 57/128 (44%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI K + +CP+C+V Y
Sbjct: 6 LVNIKEEVTCPICLDLLTEPLSLDCGHSFCQACITADHKESTLHQGERSCPLCRVGYQSE 65
Query: 62 EIRAAPHMDNLVS----VYKSMEVASGINIFVTQDESST---KSSGDLICGEQVTGGCQD 114
+R H+ N+ V S E ++ E + G++IC C+
Sbjct: 66 NLRPNRHLANIAERLREVMLSPEEGQKVDRCARHGEKLLLFCQQHGNVICWL-----CER 120
Query: 115 KVEHQGTS 122
EH+G S
Sbjct: 121 SQEHRGHS 128
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 454 SDEDLHFMKTRKKCWKINSQTEEDFC--TKSKR-------RKVDSTEVNVLENVSVVQKK 504
S+E + K + KI +Q+E D T+S R ++ + + +L+ V + K+
Sbjct: 198 SNELQNLEKEEENLLKILAQSENDMVLQTQSMRVLIADLEHRLQGSVMELLQGVEGIIKR 257
Query: 505 TYKDTVPQP 513
T T+ +P
Sbjct: 258 TTNVTLQKP 266
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 150 KKRVQVAQYPLPETPTQPAKLEGGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLR 209
++++QVA + E KLE V+ E S + I+ N + +L+ F LR
Sbjct: 140 REKLQVALEMMREKQQDAEKLEAD-VRE---EQASWKIQIK-----NDKTNILAEFKQLR 190
Query: 210 DEEDREKSSQ 219
D D E+S++
Sbjct: 191 DILDCEESNE 200
>MGI|MGI:2685640 [details] [associations]
symbol:Trim75 "tripartite motif-containing 75" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2685640 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 OrthoDB:EOG4NP73C eggNOG:NOG254111
EMBL:AK136018 IPI:IPI00339960 RefSeq:NP_001028601.1
UniGene:Mm.334557 ProteinModelPortal:Q3UWZ0 SMR:Q3UWZ0 PRIDE:Q3UWZ0
Ensembl:ENSMUST00000095295 GeneID:333307 KEGG:mmu:333307 CTD:391714
InParanoid:Q3UWZ0 KO:K12037 OMA:NILVETI NextBio:399957 Bgee:Q3UWZ0
Genevestigator:Q3UWZ0 Uniprot:Q3UWZ0
Length = 467
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG----SNCPVCKVPYHRREI 63
L ++ +E KCPICL L+ V++ C H FC +CI K +G S+CPVC+ R +
Sbjct: 7 LARLQKETKCPICLDDLTDPVTVECGHNFCRSCI-KDFWAGQQATSSCPVCRHQCQHRNL 65
Query: 64 RAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVE 117
R+ + N++ ++ ++ G+ + ESST + +T C+D ++
Sbjct: 66 RSNAQLGNMI---ETAQLLQGMEN--KRHESSTSCERH---NQALTLFCEDDLQ 111
>UNIPROTKB|Q495X7 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HSSP:Q9CQJ4 HOGENOM:HOG000234133
HOVERGEN:HBG001357 EMBL:AK093201 EMBL:BC100983 EMBL:BC100984
EMBL:BC100985 EMBL:BC100986 IPI:IPI00167899 RefSeq:NP_001244954.1
RefSeq:NP_689833.1 UniGene:Hs.368004 ProteinModelPortal:Q495X7
SMR:Q495X7 STRING:Q495X7 PhosphoSite:Q495X7 DMDM:114154820
PaxDb:Q495X7 PRIDE:Q495X7 Ensembl:ENST00000341062
Ensembl:ENST00000508504 Ensembl:ENST00000512596 GeneID:166655
KEGG:hsa:166655 UCSC:uc003iqy.1 CTD:166655 GeneCards:GC04P165953
HGNC:HGNC:21162 HPA:HPA035810 neXtProt:NX_Q495X7
PharmGKB:PA134909634 eggNOG:NOG253525 InParanoid:Q495X7 KO:K12029
OMA:VSWKDLD OrthoDB:EOG4NP73C PhylomeDB:Q495X7 GenomeRNAi:166655
NextBio:88609 ArrayExpress:Q495X7 Bgee:Q495X7 CleanEx:HS_TRIM60
Genevestigator:Q495X7 Uniprot:Q495X7
Length = 471
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
L + E CPICL L V++ C H FC +C+ S K + CPVC+ + + R
Sbjct: 7 LVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCFPYKSFR 66
Query: 65 AAPHMDNLVSVYKSMEV 81
P + NL + K +++
Sbjct: 67 RNPQLRNLTEIAKQLQI 83
>UNIPROTKB|Q5EBN2 [details] [associations]
symbol:TRIM61 "Putative tripartite motif-containing protein
61" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:Q9CQJ4 KO:K12029 EMBL:BC089393
IPI:IPI00058949 RefSeq:NP_001012414.1 UniGene:Hs.654633
ProteinModelPortal:Q5EBN2 SMR:Q5EBN2 STRING:Q5EBN2
PhosphoSite:Q5EBN2 DMDM:74741447 PRIDE:Q5EBN2
Ensembl:ENST00000329314 GeneID:391712 KEGG:hsa:391712
UCSC:uc003iqw.3 CTD:391712 GeneCards:GC04M165875 HGNC:HGNC:24339
HPA:HPA049109 neXtProt:NX_Q5EBN2 PharmGKB:PA134868214
eggNOG:NOG257669 HOGENOM:HOG000203866 HOVERGEN:HBG094090
InParanoid:Q5EBN2 OMA:SAHFNLR OrthoDB:EOG4SXNDK GenomeRNAi:391712
NextBio:104795 Bgee:Q5EBN2 CleanEx:HS_TRIM61 Genevestigator:Q5EBN2
Uniprot:Q5EBN2
Length = 209
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
L + E CPICL L V+++C H FC +CI+ S K + CP C R+
Sbjct: 7 LADLRAEASCPICLDYLKDPVTISCGHNFCLSCIIMSWKDLHDSFPCPFCHFCCPERKFI 66
Query: 65 AAPHMDNLVSVYKSMEVAS 83
+ P + +L + K +++ S
Sbjct: 67 SNPQLGSLTEIAKQLQIRS 85
>UNIPROTKB|Q96A37 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 EMBL:CH471184 Gene3D:3.30.40.10 InterPro:IPR013083
PROSITE:PS50330 InterPro:IPR017907 InterPro:IPR008598
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:115992 eggNOG:NOG149065
OrthoDB:EOG4DJJX8 EMBL:AK057106 EMBL:AK057201 EMBL:BC013948
EMBL:BC017226 IPI:IPI00059215 IPI:IPI00647888 RefSeq:NP_001165286.1
RefSeq:NP_001165287.1 RefSeq:NP_849163.1 UniGene:Hs.513804
ProteinModelPortal:Q96A37 SMR:Q96A37 IntAct:Q96A37 STRING:Q96A37
PhosphoSite:Q96A37 DMDM:74762644 PRIDE:Q96A37 DNASU:115992
Ensembl:ENST00000312838 Ensembl:ENST00000537718
Ensembl:ENST00000541206 GeneID:115992 KEGG:hsa:115992
UCSC:uc002flk.3 GeneCards:GC16M088762 HGNC:HGNC:28856 HPA:HPA042970
neXtProt:NX_Q96A37 PharmGKB:PA134915234 InParanoid:Q96A37
OMA:LVKHCVD PhylomeDB:Q96A37 ChiTaRS:RNF166 GenomeRNAi:115992
NextBio:79721 ArrayExpress:Q96A37 Bgee:Q96A37 CleanEx:HS_RNF166
Genevestigator:Q96A37 GermOnline:ENSG00000158717 Uniprot:Q96A37
Length = 237
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/109 (30%), Positives = 54/109 (49%)
Query: 17 CPICLSLLSSAVSL-TCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAAPHMDNLVS 74
CPICL + V++ +C H FC C+ ++ S CP+C++P+ +++ A H++ +S
Sbjct: 33 CPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKATHVEKQLS 92
Query: 75 VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSK 123
YK+ G N VT + S L EQ+ C V TS+
Sbjct: 93 SYKAP--CRGCNKKVTLAKMRVHISSCLKVQEQMAN-CPKFVPVVPTSQ 138
>RGD|621072 [details] [associations]
symbol:Bard1 "BRCA1 associated RING domain 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISO;ISS] [GO:0042325 "regulation of phosphorylation"
evidence=ISO;ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISO;ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO;ISS;IDA] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO;ISS] [GO:0046826 "negative
regulation of protein export from nucleus" evidence=ISO;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0085020 "protein
K6-linked ubiquitination" evidence=ISO;ISS] InterPro:IPR001841
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
PROSITE:PS50089 SMART:SM00184 SMART:SM00248 UniPathway:UPA00143
InterPro:IPR001357 RGD:621072 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0042803 GO:GO:0042325 GO:GO:0046872
eggNOG:COG0666 GO:GO:0008270 GO:GO:0006281 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007283 GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0070531 GO:GO:0031436
CTD:580 HOGENOM:HOG000237306 HOVERGEN:HBG050662 KO:K10683
OrthoDB:EOG4FFD1B GO:GO:0046826 GO:GO:0085020 EMBL:AF182946
IPI:IPI00214992 RefSeq:NP_072144.1 UniGene:Rn.48735
ProteinModelPortal:Q9QZH2 SMR:Q9QZH2 STRING:Q9QZH2 PRIDE:Q9QZH2
GeneID:64557 KEGG:rno:64557 UCSC:RGD:621072 InParanoid:Q9QZH2
NextBio:613468 ArrayExpress:Q9QZH2 Genevestigator:Q9QZH2
GermOnline:ENSRNOG00000014960 Uniprot:Q9QZH2
Length = 768
Score = 126 (49.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 5 RSHLEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREI 63
R+ L ++ + L+C C ++L V L C H+FC+ CI + GS CPVC P ++
Sbjct: 32 RAALARLEKLLRCSRCANILREPVCLGGCEHIFCSGCISDCV--GSGCPVCHTPAWILDL 89
Query: 64 RAAPHMDNLVSVYKSME 80
+ +D+++ +Y ++
Sbjct: 90 KINRQLDSMIQLYSKLQ 106
Score = 61 (26.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 131 SKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTGELKSSSVVIR 190
SK+ P VC + CP P PT +K G V + +GE++ ++ +
Sbjct: 288 SKSEEAPEKKVCVEDRCPVGSDGNPKGCHRP--PTSTSKKCGSNVPSASGEIREPTL-LA 344
Query: 191 ENPVI 195
EN V+
Sbjct: 345 ENVVL 349
>UNIPROTKB|F1PAI7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
[GO:2000617 "positive regulation of histone H3-K9 acetylation"
evidence=IEA] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0035067 "negative regulation of histone acetylation"
evidence=IEA] [GO:0009048 "dosage compensation by inactivation of X
chromosome" evidence=IEA] [GO:0007098 "centrosome cycle"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 EMBL:AAEX03006439 EMBL:AAEX03006438
Ensembl:ENSCAFT00000023190 Uniprot:F1PAI7
Length = 1882
Score = 146 (56.5 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 43/190 (22%), Positives = 88/190 (46%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM---KSGSNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K S CP+CK +R ++
Sbjct: 15 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS----VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQG 120
+ LV + + E+ +G+ + + S +++ E+V+ ++ G
Sbjct: 75 ESTRFSQLVEELLKIIHAFELDTGLQFADSYNFSKKENNSPEHLKEEVS-----IIQSMG 129
Query: 121 -TSKGKRFRRTS--KATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKN 177
++ KR R++ T++ + + + ++ Q P+ + +L + ++
Sbjct: 130 YRNRAKRLRQSEPENPTLQETSLSVQLSNLGIVRSLRTKQQIQPQNKSVYIELGSDSSED 189
Query: 178 TTGELKSSSV 187
T + S SV
Sbjct: 190 TVNKASSCSV 199
Score = 56 (24.8 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 25/78 (32%), Positives = 33/78 (42%)
Query: 342 NTNPNNMIENGKLNKKGRKANSTA--QKKYAKRDTNKGSTTPATSNEESENFVQKQTSIS 399
N P N E G +K + AN T +K+ A R T + SN E E +
Sbjct: 549 NNGPENETE-GDYVQKEKNANPTESLEKESAFR-TKTEPMSSRISNMELELNSSSSKAPK 606
Query: 400 NAKFSQKSSNRRGTCAAE 417
+ +KSS R TCA E
Sbjct: 607 KNRLRRKSSARH-TCALE 623
Score = 49 (22.3 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 597 SDIGVLEKLHKTQRGALRKCETLAHKIQCSFCHSSENSEASGEMVH 642
+D G + + + LRK +T++++ Q + C + EN + E +H
Sbjct: 774 TDYGTQDSISLLEADTLRKAKTVSNQ-QANLCATIENPK---EPIH 815
Score = 49 (22.3 bits), Expect = 8.7e-05, Sum P(5) = 8.7e-05
Identities = 29/140 (20%), Positives = 59/140 (42%)
Query: 371 KRDTNK-GSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVR 429
KRD + T NE ++VQK+ + + + +K S R EP+ + +++
Sbjct: 539 KRDGHVINITNNGPENETEGDYVQKEKNANPTESLEKESAFR--TKTEPMSSRI--SNME 594
Query: 430 TEIVDQHGKNIGSDLPTSLGKKQGSDED--LHFMKTRKKCWKINSQTEEDFCTKS---KR 484
E+ K + L +K + L F+ R +S+ + + C+ S K+
Sbjct: 595 LELNSSSSK---APKKNRLRRKSSARHTCALEFVVNRNLNPPDHSELQIESCSSSEEMKK 651
Query: 485 RKVDSTEVNVLENVSVVQKK 504
+ +D V + + ++Q K
Sbjct: 652 QHLDQVPVRHNKTLQLMQDK 671
Score = 45 (20.9 bits), Expect = 4.5e-05, Sum P(5) = 4.5e-05
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 571 VGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRG 611
VG S V E SST NE S GSS + +L + RG
Sbjct: 1040 VGSSSVNEVVSST-NEVGSSVNEVGSSGENIQAELGRN-RG 1078
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 762 SKKLLTQHNKVAFKSDISTNSWQ 784
S LLT+H K++I NS Q
Sbjct: 286 SSLLLTKHRMNVEKAEICNNSKQ 308
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 253 AEVHGKSDGLDFFESEIFEWTQ--RACSPELLPSPAKTQVADAE 294
AE+ S S+ W + C+ +PS K V +A+
Sbjct: 300 AEICNNSKQPGLARSQQSRWAESKETCNDRQIPSTEKKVVVNAD 343
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 682 NLEAELARSRRIXXXXXXXXXXXXXXYEKTCRKSFHVP-CAKLILQCRWDTDNFVMLCPL 740
N++AEL R+R + C++S + C ++ + ++ V+
Sbjct: 1068 NIQAELGRNR---GPKLNAMLRLGLMQPEVCKQSLSLSNCKHPEMKWQGQSEGAVLSVSA 1124
Query: 741 HTSSNLPNENP----GSQESRKKCISKK--LLTQHN---KVAF-KSDISTNS 782
S L ++NP GS S + C LL KV+F +SDI S
Sbjct: 1125 DFSPCLISDNPEQPMGSSRSSQVCSETPDDLLNGDKIKGKVSFAESDIKEKS 1176
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 571 VGESKVQEGCSSTANETQSPEGVRG 595
+G S+ + CS T ++ + + ++G
Sbjct: 1139 MGSSRSSQVCSETPDDLLNGDKIKG 1163
>UNIPROTKB|Q5D7I1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9509 "Ateles geoffroyi" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740616 EMBL:AY843516
ProteinModelPortal:Q5D7I1 SMR:Q5D7I1 Uniprot:Q5D7I1
Length = 547
Score = 145 (56.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 38/122 (31%), Positives = 56/122 (45%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRREIRAAP 67
E+ CPICL LL+ +SL C H FC ACI + K + +CP+C+V Y +R
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRVSYQSENLRPNR 71
Query: 68 HMDNLVS----VYKSMEVASGINIFVTQDESST---KSSGDLICGEQVTGGCQDKVEHQG 120
H+ N+ V S E ++ E + G++IC C+ EH+G
Sbjct: 72 HLANIAERLREVMLSPEEGQKVDRCARHGEKLLLFCQQHGNVICWL-----CERSQEHRG 126
Query: 121 TS 122
S
Sbjct: 127 HS 128
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 196 NKEGTVLSPFFWLRDEEDREKSSQ 219
N + +L+ F LRD D E+S++
Sbjct: 177 NDKTNILAEFKQLRDILDCEESNE 200
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 136 (52.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L + ++ C H FC CI+ +++SG+ CP C K +R +R P+ D
Sbjct: 48 ELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 107
Query: 71 NLVS-VYKSME 80
L+S +Y S +
Sbjct: 108 ALISKIYPSRD 118
Score = 39 (18.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/47 (23%), Positives = 17/47 (36%)
Query: 621 HKIQCSFCHSSENSEASGEMVHYYNGKPVSADYNGGSKIIHSHRNCT 667
H Q + CHS E M GK + G++ +C+
Sbjct: 134 HNNQQALCHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCS 180
>UNIPROTKB|E9PFM0 [details] [associations]
symbol:TRIM6 "Tripartite motif-containing protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC015691
HGNC:HGNC:16277 ChiTaRS:TRIM6 IPI:IPI00470944
ProteinModelPortal:E9PFM0 SMR:E9PFM0 Ensembl:ENST00000380107
UCSC:uc009yeo.2 ArrayExpress:E9PFM0 Bgee:E9PFM0 Uniprot:E9PFM0
Length = 462
Score = 132 (51.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +S+ C H FC ACI +S+ + G +CPVC+ Y +R
Sbjct: 12 EVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPN 71
Query: 67 PHMDNLV 73
H+ N+V
Sbjct: 72 RHLANIV 78
Score = 48 (22.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 20/95 (21%), Positives = 43/95 (45%)
Query: 431 EIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEEDFCTKSKRRKVDST 490
E+ ++ + L ++Q +++ F++ +K WK +Q E + C ++ T
Sbjct: 109 EVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWK--NQMEPERC------RIQ-T 159
Query: 491 EVNVLENV--SVVQKKTYKDTVPQPSLIPTFEDAD 523
E N L N+ V Q++ K + + E+A+
Sbjct: 160 EFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAE 194
Score = 45 (20.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 472 SQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPT 518
+Q+ + + +RR ST + +L++VS V +++ T+ +P +PT
Sbjct: 201 TQSLRELISDLERRCQGST-MELLQDVSDVTERSEFWTLRKPEALPT 246
>UNIPROTKB|F1PHC6 [details] [associations]
symbol:RNF166 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 GeneTree:ENSGT00530000063064
CTD:115992 EMBL:AAEX03003968 EMBL:AAEX03003969 RefSeq:XP_851172.1
ProteinModelPortal:F1PHC6 Ensembl:ENSCAFT00000031628 GeneID:608926
KEGG:cfa:608926 Uniprot:F1PHC6
Length = 237
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/112 (28%), Positives = 55/112 (49%)
Query: 14 ELKCPICLSLLSSAVSL-TCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAAPHMDN 71
+ CPICL + V++ +C H FC C+ ++ S CP+C++P+ +++ A H++
Sbjct: 30 QYSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKAAHVEK 89
Query: 72 LVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSK 123
+S YK+ G N VT + S + EQ+ C V TS+
Sbjct: 90 QLSSYKAP--CRGCNKKVTLAKMRVHVSSCMKVQEQMAN-CPKFVPVVPTSQ 138
>UNIPROTKB|Q99728 [details] [associations]
symbol:BARD1 "BRCA1-associated RING domain protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IMP;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0006974 "response to DNA damage stimulus"
evidence=NAS] [GO:0031441 "negative regulation of mRNA 3'-end
processing" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IDA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=NAS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA;NAS] [GO:0016567 "protein ubiquitination"
evidence=NAS] [GO:0001894 "tissue homeostasis" evidence=TAS]
[GO:0042325 "regulation of phosphorylation" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0019900 "kinase binding" evidence=NAS]
[GO:0007050 "cell cycle arrest" evidence=NAS] [GO:0000151
"ubiquitin ligase complex" evidence=NAS] [GO:0031436 "BRCA1-BARD1
complex" evidence=IDA] [GO:0070531 "BRCA1-A complex" evidence=IDA]
[GO:0085020 "protein K6-linked ubiquitination" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR001841
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
PROSITE:PS50089 SMART:SM00184 SMART:SM00248 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0042325 GO:GO:0046872 eggNOG:COG0666
GO:GO:0008270 GO:GO:0006281 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007050 GO:GO:0007283
GO:GO:0006974 GO:GO:0003723 GO:GO:0019900 GO:GO:0043065
GO:GO:0001894 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0045732 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 Pathway_Interaction_DB:bard1pathway
GO:GO:0070531 GO:GO:0031436 EMBL:U76638 EMBL:AF038042 EMBL:AF038034
EMBL:AF038035 EMBL:AF038036 EMBL:AF038037 EMBL:AF038038
EMBL:AF038039 EMBL:AF038040 EMBL:AF038041 EMBL:AC016708
EMBL:BC126426 IPI:IPI00017746 RefSeq:NP_000456.2 UniGene:Hs.591642
PDB:1JM7 PDB:2NTE PDB:2R1Z PDB:3C5R PDB:3FA2 PDBsum:1JM7
PDBsum:2NTE PDBsum:2R1Z PDBsum:3C5R PDBsum:3FA2
ProteinModelPortal:Q99728 SMR:Q99728 DIP:DIP-5972N IntAct:Q99728
MINT:MINT-207047 STRING:Q99728 PhosphoSite:Q99728 DMDM:116241265
PaxDb:Q99728 PeptideAtlas:Q99728 PRIDE:Q99728
Ensembl:ENST00000260947 GeneID:580 KEGG:hsa:580 UCSC:uc002veu.2
CTD:580 GeneCards:GC02M215556 H-InvDB:HIX0030010 HGNC:HGNC:952
MIM:601593 neXtProt:NX_Q99728 Orphanet:145 PharmGKB:PA25256
HOGENOM:HOG000237306 HOVERGEN:HBG050662 InParanoid:Q99728 KO:K10683
OMA:KKNSIKM OrthoDB:EOG4FFD1B PhylomeDB:Q99728 BindingDB:Q99728
ChEMBL:CHEMBL1741211 ChiTaRS:BARD1 EvolutionaryTrace:Q99728
GenomeRNAi:580 NextBio:2367 ArrayExpress:Q99728 Bgee:Q99728
CleanEx:HS_BARD1 Genevestigator:Q99728 GermOnline:ENSG00000138376
GO:GO:0031441 GO:GO:0046826 GO:GO:0085020 Uniprot:Q99728
Length = 777
Score = 137 (53.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 53/248 (21%), Positives = 105/248 (42%)
Query: 5 RSHLEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREI 63
R+ L+++ + L+C C ++L V L C H+FC+ C+ + G+ CPVC P +++
Sbjct: 38 RAALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCI--GTGCPVCYTPAWIQDL 95
Query: 64 RAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSK 123
+ +D+++ + + N+ + S K G ++ ++ + +
Sbjct: 96 KINRQLDSMIQLCSKLR-----NLLHDNELSDLKEDKPRKSLFNDAGNKKNSIKMWFSPR 150
Query: 124 GKRFRRT-SKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNT--TG 180
K+ R SKA+V+ T+P+ Q Y +P+ PA + K + +G
Sbjct: 151 SKKVRYVVSKASVQ------TQPAIKKDASAQQDSYEFV-SPSPPADVSERAKKASARSG 203
Query: 181 ELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSDLKD 240
+ + + N N E F + EE ++K + I+ P + DL
Sbjct: 204 KKQKKKTLAEINQKWNLEAEKEDGEFDSK-EESKQKLVSFCSQPSVISSPQINGEIDLLA 262
Query: 241 SEDISSSE 248
S ++ SE
Sbjct: 263 SGSLTESE 270
>UNIPROTKB|Q6AZZ1 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IPI] [GO:0035035 "histone
acetyltransferase binding" evidence=IPI] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0060765 "regulation of
androgen receptor signaling pathway" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005794 GO:GO:0048471
EMBL:CH471064 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0060765 InterPro:IPR017907
GO:GO:0051865 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 HSSP:P38398 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG001357 eggNOG:NOG252602
EMBL:AF360739 EMBL:AF439153 EMBL:AK001231 EMBL:AK022923
EMBL:AK291166 EMBL:AK056523 EMBL:AC090719 EMBL:BC075058
EMBL:BC109063 EMBL:AY005802 IPI:IPI00292487 RefSeq:NP_060543.5
UniGene:Hs.523438 UniGene:Hs.738828 ProteinModelPortal:Q6AZZ1
SMR:Q6AZZ1 IntAct:Q6AZZ1 STRING:Q6AZZ1 PhosphoSite:Q6AZZ1
DMDM:74748376 PaxDb:Q6AZZ1 PRIDE:Q6AZZ1 DNASU:55128
Ensembl:ENST00000300747 GeneID:55128 KEGG:hsa:55128 UCSC:uc001lzf.2
CTD:55128 GeneCards:GC11M004577 HGNC:HGNC:21161 HPA:HPA023455
MIM:613184 neXtProt:NX_Q6AZZ1 PharmGKB:PA134939870
InParanoid:Q6AZZ1 KO:K12033 OMA:CYSIGTN OrthoDB:EOG4XSKPR
ChiTaRS:TRIM68 GenomeRNAi:55128 NextBio:58790 ArrayExpress:Q6AZZ1
Bgee:Q6AZZ1 CleanEx:HS_TRIM68 Genevestigator:Q6AZZ1
GermOnline:ENSG00000167333 Uniprot:Q6AZZ1
Length = 485
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 3 DQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV-------KSMKSGSNCPVCK 55
D + +E + E+ CPIC++ L +S+ C H FC++C+ +S G CP+C+
Sbjct: 2 DPTALVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCR 61
Query: 56 VPYHRREIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVT---GGC 112
P R +R + N+V + + + G+ + E + + C E V C
Sbjct: 62 APVQPRNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKL-KMFCKEDVLIMCEAC 120
Query: 113 QDKVEHQGTS 122
EH+ S
Sbjct: 121 SQSPEHEAHS 130
>UNIPROTKB|Q5F3B2 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR003903 PROSITE:PS50330 InterPro:IPR017907
InterPro:IPR008598 HOGENOM:HOG000230946 HOVERGEN:HBG074331
EMBL:AJ851738 IPI:IPI00589511 RefSeq:NP_001012953.1
UniGene:Gga.8507 ProteinModelPortal:Q5F3B2 GeneID:425360
KEGG:gga:425360 CTD:115992 eggNOG:NOG149065 InParanoid:Q5F3B2
OrthoDB:EOG4DJJX8 NextBio:20827453 ArrayExpress:Q5F3B2
Uniprot:Q5F3B2
Length = 244
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 9 EKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAA 66
E + + CPICL + AV + C H FC C+ ++ S CP+C++P+ +++ A
Sbjct: 32 EALEAQFSCPICLEVFHRAVGIAGCGHTFCGECLQPCLQVPSPLCPLCRMPFDPKKVEKA 91
Query: 67 PHMDNLVSVYKS 78
++ +S YK+
Sbjct: 92 SSVEKQLSSYKA 103
>DICTYBASE|DDB_G0273535 [details] [associations]
symbol:mip1-2 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHRRE 62
+K + L+CPIC VS C H+FC+ CIV ++K +CPVC H ++
Sbjct: 492 DKKSKNLECPICFEDTKPYVSTLCGHIFCSDCIVNALKKKKSCPVCNAKLHGKK 545
>DICTYBASE|DDB_G0273399 [details] [associations]
symbol:mip1-1 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHRRE 62
+K + L+CPIC VS C H+FC+ CIV ++K +CPVC H ++
Sbjct: 492 DKKSKNLECPICFEDTKPYVSTLCGHIFCSDCIVNALKKKKSCPVCNAKLHGKK 545
>UNIPROTKB|F8W6K1 [details] [associations]
symbol:SCAF11 "Protein SCAF11" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC000015 HGNC:HGNC:10784 ChiTaRS:SCAF11
EMBL:AC084878 IPI:IPI00852713 ProteinModelPortal:F8W6K1 SMR:F8W6K1
Ensembl:ENST00000266589 ArrayExpress:F8W6K1 Bgee:F8W6K1
Uniprot:F8W6K1
Length = 118
Score = 109 (43.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 16 KCPICLS-LLSSAVSL--TCNHVFCNACIVKSMKSGSNCPVCKVPY 58
+CPICL+ LL V +CNHVFC CI+K ++ ++CP+ + P+
Sbjct: 56 RCPICLNCLLEKEVGFPESCNHVFCMTCILKWAETLASCPIDRKPF 101
>UNIPROTKB|H0YH05 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055
ChiTaRS:RNF10 Ensembl:ENST00000541955 Uniprot:H0YH05
Length = 129
Score = 109 (43.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 17 CPICLSLLSSAVSLTCNHVFCNACIVK----SMKSGSNCPVCKVPYHRREIRA 65
CPICL ++A C H+FC ACI+ S K+ S CP+C H++++++
Sbjct: 18 CPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLKS 70
>UNIPROTKB|F1N8I5 [details] [associations]
symbol:BRCA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089
SMART:SM00184 InterPro:IPR001357 Pfam:PF00097 Pfam:PF00533
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
GO:GO:0009048 GO:GO:0007098 EMBL:AADN02068671 IPI:IPI00587753
Ensembl:ENSGALT00000004392 Ensembl:ENSGALT00000039722 OMA:INASHEN
Uniprot:F1N8I5
Length = 1749
Score = 149 (57.5 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 38/147 (25%), Positives = 72/147 (48%)
Query: 1 MGDQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM---KSGS-NCPVCKV 56
+GD ++ L M + L+CP+CL ++ VS C+HVFC C+ K + K G CP+CK
Sbjct: 8 IGDVQNVLSAMQKNLECPVCLDVIKEPVSTKCDHVFCRFCMFKLLSRKKKGVIQCPLCKT 67
Query: 57 PYHRREIRAAPH----MDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGC 112
+R ++ ++ L+ + E+ +G+ F++ K+S ++ E + G
Sbjct: 68 EVTKRSLKENSRFKQLIEGLLEAISAFELDTGVK-FLSS-RYFPKTSTEVATAE-LLGNN 124
Query: 113 QDKVEHQG---TSKGKRFRRTSKATVE 136
++ +G +G + R T+E
Sbjct: 125 SSVIQSKGFRNRKRGAKENRQDSCTLE 151
Score = 48 (22.0 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 352 GKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRR 411
GK ++GRK+N + RD PAT E++ ++ ++N++ + R+
Sbjct: 473 GKTYERGRKSNPST----ILRDI-----LPATKKEDA---AAEEGCLNNSRKDRLKRKRK 520
Query: 412 GTCAAEP 418
C +P
Sbjct: 521 SACILQP 527
Score = 41 (19.5 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 575 KVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGAL-RKCETLAHKIQCSFCHSSEN 633
++Q+ +S + +P + S + + KT AL +C + + + +CS S
Sbjct: 1240 QIQKQVTSVVQSSANPSTLPCSECLNENNE-QKTLEAALSNECASPSQESECSVNLFSSQ 1298
Query: 634 SEASGEMV 641
S S E V
Sbjct: 1299 SNMSEESV 1306
>UNIPROTKB|F5H012 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC009758
HGNC:HGNC:11312 IPI:IPI01012950 ProteinModelPortal:F5H012
SMR:F5H012 PRIDE:F5H012 Ensembl:ENST00000543625 ArrayExpress:F5H012
Bgee:F5H012 Uniprot:F5H012
Length = 475
Score = 132 (51.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 6 SHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIR 64
+ L M E+ CPICL VS+ C H FC CI + K G + CPVC+ + + +R
Sbjct: 5 ARLTMMWEEVTCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLKNLR 64
Query: 65 AAPHMDNLVSVYK--SMEVASG 84
+ N+V+ K S E G
Sbjct: 65 PNRQLANMVNNLKEISQEAREG 86
>UNIPROTKB|P19474 [details] [associations]
symbol:TRIM21 "E3 ubiquitin-protein ligase TRIM21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0031648 "protein
destabilization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0070206 "protein trimerization" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0006513 "protein monoubiquitination"
evidence=IDA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0090086 "negative regulation
of protein deubiquitination" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 InterPro:IPR020457
Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007049
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932
GO:GO:0032088 GO:GO:0004842 GO:GO:0000209 GO:GO:0070206
InterPro:IPR017907 GO:GO:0051865 GO:GO:0045787 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0031648
GO:GO:0006513 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 GO:GO:0090086 PDB:2IWG PDBsum:2IWG EMBL:AC009758
CTD:6737 eggNOG:NOG276395 HOGENOM:HOG000234133 HOVERGEN:HBG001357
KO:K10651 OrthoDB:EOG4KWJSP EMBL:M34551 EMBL:U01882 EMBL:M62800
EMBL:U13658 EMBL:U13657 EMBL:AF391283 EMBL:AY742713 EMBL:BC010861
IPI:IPI00018971 IPI:IPI00969571 PIR:A55642 RefSeq:NP_003132.2
UniGene:Hs.532357 ProteinModelPortal:P19474 SMR:P19474
IntAct:P19474 MINT:MINT-1462811 STRING:P19474 PhosphoSite:P19474
DMDM:133250 PaxDb:P19474 PRIDE:P19474 DNASU:6737
Ensembl:ENST00000254436 GeneID:6737 KEGG:hsa:6737 UCSC:uc001lyy.1
GeneCards:GC11M004406 HGNC:HGNC:11312 HPA:CAB004566 HPA:HPA005673
MIM:109092 neXtProt:NX_P19474 PharmGKB:PA36136 InParanoid:P19474
OMA:IAMKRAD EvolutionaryTrace:P19474 GenomeRNAi:6737 NextBio:26280
ArrayExpress:P19474 Bgee:P19474 CleanEx:HS_TRIM21
Genevestigator:P19474 GermOnline:ENSG00000132109 Uniprot:P19474
Length = 475
Score = 132 (51.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 6 SHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIR 64
+ L M E+ CPICL VS+ C H FC CI + K G + CPVC+ + + +R
Sbjct: 5 ARLTMMWEEVTCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLKNLR 64
Query: 65 AAPHMDNLVSVYK--SMEVASG 84
+ N+V+ K S E G
Sbjct: 65 PNRQLANMVNNLKEISQEAREG 86
>UNIPROTKB|E1BM69 [details] [associations]
symbol:LOC516599 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:DAAA02040907 IPI:IPI00838178
Ensembl:ENSBTAT00000006913 OMA:MANSENE Uniprot:E1BM69
Length = 497
Score = 135 (52.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMK---SGSN----CPVCKVPYHRREIRAA 66
E+ CPICL LL+ +SL C H FC CI + +G CPVC++ Y ++R
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQICITANSNESLTGQERARKCPVCRINYKSGKLRPN 71
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGD---LIC---GEQVTGGCQDKVEHQG 120
H+ N+V + ++++ Q++ G+ L C G+ + C+ EH G
Sbjct: 72 WHLANIVQRVREVKLS-----LEEQEKHLCAHHGEKLLLFCEEDGKVICWLCERSQEHHG 126
Score = 43 (20.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 19/93 (20%), Positives = 41/93 (44%)
Query: 553 QWNKRMKASFSGISKDGLVGE---SKVQEGCSSTANETQSPEGVRGSSDIGVL-EKLHKT 608
++ K+++A+ + ++ E S +E ++ N+TQ E ++ L E L
Sbjct: 138 EYQKKLQAALERLKQEQQEAEELESDFREEIAAWKNQTQH-ERQNVQAEFKKLREILDSE 196
Query: 609 QRGALRKCETLAHKIQCSFCHSSENSEASGEMV 641
+R L+K + I C+ +S ++V
Sbjct: 197 ERKELQKLKAEETAILCTMANSENELVQQSQLV 229
>UNIPROTKB|Q8WVD3 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0016055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 EMBL:CH471088
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P38398 CleanEx:HS_NARF
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:51444 eggNOG:NOG44750
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K EMBL:AF162680 EMBL:AK023579
EMBL:AK315761 EMBL:BT006878 EMBL:CR457150 EMBL:BC018107
EMBL:AL133557 IPI:IPI00012239 IPI:IPI00328938 PIR:T43439
RefSeq:NP_001178253.2 RefSeq:NP_057355.2 RefSeq:NP_937761.1
UniGene:Hs.302408 ProteinModelPortal:Q8WVD3 SMR:Q8WVD3
IntAct:Q8WVD3 MINT:MINT-1479614 STRING:Q8WVD3 PhosphoSite:Q8WVD3
DMDM:74762632 PRIDE:Q8WVD3 DNASU:51444 Ensembl:ENST00000257190
Ensembl:ENST00000261593 GeneID:51444 KEGG:hsa:51444 UCSC:uc002kxg.3
UCSC:uc002kxh.3 GeneCards:GC18P029671 HGNC:HGNC:17765 HPA:HPA041101
HPA:HPA041373 neXtProt:NX_Q8WVD3 PharmGKB:PA134952071
InParanoid:Q8WVD3 PhylomeDB:Q8WVD3 GenomeRNAi:51444 NextBio:55035
Bgee:Q8WVD3 CleanEx:HS_RNF138 Genevestigator:Q8WVD3 Uniprot:Q8WVD3
Length = 245
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 17 CPICLSLLSSAVSLT-CNHVFCNACIVKSMK-SGSNCPVCKVPYHRREIRAAP 67
CP+C +L + V T C HVFC C + +M+ SG++CP+C+ RRE RA P
Sbjct: 18 CPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRRE-RACP 69
>RGD|1359126 [details] [associations]
symbol:Trim26 "tripartite motif-containing 26" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1359126 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:BX883051 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00690000101808 CTD:7726 eggNOG:NOG291505 KO:K12008
IPI:IPI00422036 RefSeq:NP_001011665.1 UniGene:Rn.163420
ProteinModelPortal:P62603 STRING:P62603 Ensembl:ENSRNOT00000001019
GeneID:309586 KEGG:rno:309586 UCSC:RGD:1359126 NextBio:661018
ArrayExpress:P62603 Genevestigator:P62603
GermOnline:ENSRNOG00000032930 Uniprot:P62603
Length = 542
Score = 132 (51.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACI--VKSMKSGSN--CPVCKVPYHRREI 63
L + E+ C ICL L V++ C HVFC +C ++ + SG+ CP+CK P+ + I
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTSDIRPI-SGNRPVCPLCKKPFKKENI 65
Query: 64 RAAPHMDNLVSVYKSMEVASG 84
R + +LV + ++V +G
Sbjct: 66 RPVWQLASLVENIERLKVDNG 86
Score = 47 (21.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 171 EGGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDR 214
EGGTV T E S ++ + L PF WL+ E R
Sbjct: 499 EGGTVTFTNAE--SQELIYTFTTTFTRR---LVPFLWLKWPEAR 537
Score = 45 (20.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 207 WLRDEEDREKSSQHTETDAYITPPDVPSFSDLK-DSEDISSSE 248
W DEE+ E+ + E + P + D + D ED S E
Sbjct: 382 WSEDEEEGEEEEEGEEEEEDEEPGYGDRYEDWETDEEDESLGE 424
>MGI|MGI:1923931 [details] [associations]
symbol:Trim12a "tripartite motif-containing 12A"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:1923931
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 EMBL:AF220126 EMBL:AK009769 IPI:IPI00469341
RefSeq:NP_076324.2 UniGene:Mm.458309 UniGene:Mm.486388
ProteinModelPortal:Q99PQ1 SMR:Q99PQ1 STRING:Q99PQ1 PRIDE:Q99PQ1
Ensembl:ENSMUST00000070943 Ensembl:ENSMUST00000106839 GeneID:76681
KEGG:mmu:76681 CTD:76681 eggNOG:NOG310455 NextBio:345615
Bgee:Q99PQ1 CleanEx:MM_TRIM12 Genevestigator:Q99PQ1
GermOnline:ENSMUSG00000066258 Uniprot:Q99PQ1
Length = 284
Score = 129 (50.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV---KSMKSGSN---CPVCKVPYHRR 61
++ + E+ CP+CL+L+ VS C H FC CI +S+K CPVC++ Y
Sbjct: 6 MKNLKEEVTCPVCLNLMVKPVSADCGHTFCQGCITLYFESIKCDKKVFICPVCRISYQFS 65
Query: 62 EIRAAPHMDNLVSVYK 77
+R ++ N+V K
Sbjct: 66 NLRPNRNVANIVERLK 81
Score = 40 (19.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 565 ISKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGAL 613
+ KD E+++Q+ + +E + + S + L+KL + + L
Sbjct: 164 LQKDRTYWENQIQKDVQNVRSEFKRMRDIMDSEEKKELQKLRQEKEDIL 212
>UNIPROTKB|C9J3G7 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HOGENOM:HOG000231946
HGNC:HGNC:10066 ChiTaRS:PCGF3 EMBL:AC107464 IPI:IPI00878168
ProteinModelPortal:C9J3G7 SMR:C9J3G7 STRING:C9J3G7
Ensembl:ENST00000433814 ArrayExpress:C9J3G7 Bgee:C9J3G7
Uniprot:C9J3G7
Length = 109
Score = 108 (43.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 15 LKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHR 60
+ C +C L A ++T C H FC +C+VK ++ + CP C++ H+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQ 61
>UNIPROTKB|C9JYD0 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HGNC:HGNC:10066 ChiTaRS:PCGF3
EMBL:AC107464 IPI:IPI00879042 ProteinModelPortal:C9JYD0 SMR:C9JYD0
STRING:C9JYD0 Ensembl:ENST00000427463 ArrayExpress:C9JYD0
Bgee:C9JYD0 Uniprot:C9JYD0
Length = 62
Score = 108 (43.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 15 LKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHR 60
+ C +C L A ++T C H FC +C+VK ++ + CP C++ H+
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQ 61
>UNIPROTKB|F1RHN8 [details] [associations]
symbol:TRIM21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090086 "negative regulation of protein
deubiquitination" evidence=IEA] [GO:0070206 "protein trimerization"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0019005 GO:GO:0032088 GO:GO:0004842
GO:GO:0000209 GO:GO:0070206 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
GeneTree:ENSGT00690000101646 EMBL:CU915729
Ensembl:ENSSSCT00000016131 OMA:HITRIEA Uniprot:F1RHN8
Length = 469
Score = 131 (51.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 58/226 (25%), Positives = 98/226 (43%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAA 66
L +M E+ C ICL + VS+ C H FC CI + K G + CPVC+ + R +R
Sbjct: 7 LARMWDEVTCSICLDPMVEPVSIECGHSFCQECISEVGKDGGSVCPVCRQHFLLRNLRPN 66
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQD--KVEHQGTSKG 124
+ N+V K E++ G+ + + + GE++ C+D KV S+
Sbjct: 67 RQVANMVDNLK--EMSQGV-------KEGPQWELCAVHGEKLHLFCKDDGKVLCWVCSQS 117
Query: 125 KRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGG-TVKNTT--GE 181
++ R + +E + ++++QVA L Q KLE K G+
Sbjct: 118 RKHRDHTMVPIEEAAQ-------EYQEKLQVALEKLRNKQEQAEKLEADIATKRAAWKGK 170
Query: 182 LKSSSVVIRENPVINKEGTVLSPFFWLR--DEEDREKSSQHTETDA 225
+++ + I E V K L+ +EE+RE+ T+A
Sbjct: 171 VEAHKLRIHEEFVRQKNFLAEEEQRQLQKLEEEEREQLKALGATEA 216
>RGD|621485 [details] [associations]
symbol:Rnf138 "ring finger protein 138, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=ISO] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 UniPathway:UPA00143
RGD:621485 Prosite:PS00518 GO:GO:0016055 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P38398 HOVERGEN:HBG074331
CTD:51444 KO:K10668 EMBL:AF315468 EMBL:BC061821 IPI:IPI00200841
RefSeq:NP_446040.1 UniGene:Rn.6814 ProteinModelPortal:Q99PD2
GeneID:94196 KEGG:rno:94196 NextBio:617854 Genevestigator:Q99PD2
Uniprot:Q99PD2
Length = 209
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 17 CPICLSLLSSAV-SLTCNHVFCNACIVKSMK-SGSNCPVCKVPYHRREIRAAPHMDNLVS 74
CP+C +L + V + C HVFC C + +M+ SG +CP+C+ RRE RA P + +
Sbjct: 18 CPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVTRRE-RACP--ERAID 74
Query: 75 VYKSMEVASG 84
+ M SG
Sbjct: 75 LENIMRRVSG 84
>UNIPROTKB|Q99PD2 [details] [associations]
symbol:Rnf138 "E3 ubiquitin-protein ligase RNF138"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 RGD:621485 Prosite:PS00518
GO:GO:0016055 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:P38398 HOVERGEN:HBG074331 CTD:51444 KO:K10668 EMBL:AF315468
EMBL:BC061821 IPI:IPI00200841 RefSeq:NP_446040.1 UniGene:Rn.6814
ProteinModelPortal:Q99PD2 GeneID:94196 KEGG:rno:94196
NextBio:617854 Genevestigator:Q99PD2 Uniprot:Q99PD2
Length = 209
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 17 CPICLSLLSSAV-SLTCNHVFCNACIVKSMK-SGSNCPVCKVPYHRREIRAAPHMDNLVS 74
CP+C +L + V + C HVFC C + +M+ SG +CP+C+ RRE RA P + +
Sbjct: 18 CPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVTRRE-RACP--ERAID 74
Query: 75 VYKSMEVASG 84
+ M SG
Sbjct: 75 LENIMRRVSG 84
>UNIPROTKB|Q12899 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872
"metal ion binding" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:U09825 EMBL:AB088090
EMBL:AB202086 EMBL:AB103596 EMBL:CR388382 EMBL:BX927189
EMBL:BC024039 EMBL:BC032297 IPI:IPI00010948 RefSeq:NP_001229712.1
RefSeq:NP_003440.1 UniGene:Hs.720054 UniGene:Hs.731863
ProteinModelPortal:Q12899 SMR:Q12899 DIP:DIP-52853N IntAct:Q12899
STRING:Q12899 PhosphoSite:Q12899 DMDM:17380344 PRIDE:Q12899
DNASU:7726 Ensembl:ENST00000327357 Ensembl:ENST00000383607
Ensembl:ENST00000396558 Ensembl:ENST00000415923
Ensembl:ENST00000422349 Ensembl:ENST00000425523
Ensembl:ENST00000425831 Ensembl:ENST00000427535
Ensembl:ENST00000428486 Ensembl:ENST00000432326
Ensembl:ENST00000433314 Ensembl:ENST00000436219
Ensembl:ENST00000437089 Ensembl:ENST00000438384
Ensembl:ENST00000438908 Ensembl:ENST00000439094
Ensembl:ENST00000445259 Ensembl:ENST00000447711
Ensembl:ENST00000450392 Ensembl:ENST00000453195
Ensembl:ENST00000454678 Ensembl:ENST00000455000
Ensembl:ENST00000456093 Ensembl:ENST00000456770 GeneID:7726
KEGG:hsa:7726 UCSC:uc003npr.3 CTD:7726 GeneCards:GC06M030152
HGNC:HGNC:12962 MIM:600830 neXtProt:NX_Q12899 PharmGKB:PA37544
eggNOG:NOG291505 InParanoid:Q12899 KO:K12008 OMA:YEDWETD
OrthoDB:EOG42821H PhylomeDB:Q12899 GenomeRNAi:7726 NextBio:29920
ArrayExpress:Q12899 Bgee:Q12899 CleanEx:HS_TRIM26
Genevestigator:Q12899 GermOnline:ENSG00000137313 Uniprot:Q12899
Length = 539
Score = 136 (52.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMK-SGSN--CPVCKVPYHRREIR 64
L + E+ C ICL L V++ C HVFC +C SGS CP+CK P+ + IR
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIR 66
Query: 65 AAPHMDNLVSVYKSMEVASGINIF-VTQDESSTK 97
+ +LV + ++V G VT+++ K
Sbjct: 67 PVWQLASLVENIERLKVDKGRQPGEVTREQQDAK 100
Score = 42 (19.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 210 DEEDREKSSQHTETDAYITPPDVPSFSDLKDSEDISSSEL 249
+EE+ E++ D + T D S D ++ E+ E+
Sbjct: 394 EEEEEEEAGYGDGYDDWETDEDEESLGDEEEEEEEEEEEV 433
>UNIPROTKB|A6NI17 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX088647 HOGENOM:HOG000234133 EMBL:BX005441
EMBL:CR759838 HGNC:HGNC:16289 eggNOG:NOG310139 HOVERGEN:HBG083771
EMBL:BX897730 EMBL:CR759801 EMBL:CT009552 IPI:IPI00744105
SMR:A6NI17 Ensembl:ENST00000546863 Ensembl:ENST00000550119
Ensembl:ENST00000550679 Uniprot:A6NI17
Length = 425
Score = 124 (48.7 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
+ K+ E+ CPICL +L V++ C H FC CI + ++ CP+CK + IR
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 65 AAPHMDNLVSVYKSMEVA 82
+ NLV ++++ +
Sbjct: 67 FNSLLRNLVEKIQALQAS 84
Score = 46 (21.3 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEES 388
++ N N+M G L K K N T++ + G TT N S
Sbjct: 310 KSMNKNDMKSWGLLQKNNHKMNKTSEPGSSSAG---GRTTSGPPNHHS 354
Score = 45 (20.9 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 118 HQGTSKGKRFRRTSKATVEPS----GTVCTKPSCPTKKRVQVAQYPLPET 163
H+GT GK + +++ + ++ TK + P ++ ++ AQ LP +
Sbjct: 208 HEGTEAGKHYVASTEPQLNDLKKLVDSLKTKQNMPPRQLLEPAQPHLPRS 257
Score = 41 (19.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 30/165 (18%), Positives = 64/165 (38%)
Query: 221 TETDAYITPPDVPSFSDLKDSED-ISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSP 279
TE + P +DLK D + + + P ++ + SE F++ +P
Sbjct: 211 TEAGKHYVASTEPQLNDLKKLVDSLKTKQNMPPRQLLEPAQP-HLPRSEEFQFL----NP 265
Query: 280 ELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALC 339
+P + ++++A+ + +L+ + F+ + N+N+ + L
Sbjct: 266 TPVPLELEKKLSEAKSRHDSITGSLKKFKDQLQADRKKDENRFFK--SMNKNDMKSWGLL 323
Query: 340 PRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATS 384
+N N K+NK +S+A + N S+ P+ S
Sbjct: 324 QKN--------NHKMNKTSEPGSSSAGGRTTSGPPNHHSSAPSHS 360
>UNIPROTKB|C9JJD5 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX322644 HGNC:HGNC:16289 eggNOG:NOG310139
IPI:IPI01022309 ProteinModelPortal:C9JJD5 SMR:C9JJD5
Ensembl:ENST00000550348 Uniprot:C9JJD5
Length = 425
Score = 124 (48.7 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
+ K+ E+ CPICL +L V++ C H FC CI + ++ CP+CK + IR
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 65 AAPHMDNLVSVYKSMEVA 82
+ NLV ++++ +
Sbjct: 67 FNSLLRNLVEKIQALQAS 84
Score = 46 (21.3 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEES 388
++ N N+M G L K K N T++ + G TT N S
Sbjct: 310 KSMNKNDMKSWGLLQKNNHKMNKTSEPGSSSAG---GRTTSGPPNHHS 354
Score = 45 (20.9 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 118 HQGTSKGKRFRRTSKATVEPS----GTVCTKPSCPTKKRVQVAQYPLPET 163
H+GT GK + +++ + ++ TK + P ++ ++ AQ LP +
Sbjct: 208 HEGTEAGKHYVASTEPQLNDLKKLVDSLKTKQNMPPRQLLEPAQPHLPRS 257
Score = 41 (19.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 30/165 (18%), Positives = 64/165 (38%)
Query: 221 TETDAYITPPDVPSFSDLKDSED-ISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSP 279
TE + P +DLK D + + + P ++ + SE F++ +P
Sbjct: 211 TEAGKHYVASTEPQLNDLKKLVDSLKTKQNMPPRQLLEPAQP-HLPRSEEFQFL----NP 265
Query: 280 ELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALC 339
+P + ++++A+ + +L+ + F+ + N+N+ + L
Sbjct: 266 TPVPLELEKKLSEAKSRHDSITGSLKKFKDQLQADRKKDENRFFK--SMNKNDMKSWGLL 323
Query: 340 PRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATS 384
+N N K+NK +S+A + N S+ P+ S
Sbjct: 324 QKN--------NHKMNKTSEPGSSSAGGRTTSGPPNHHSSAPSHS 360
>UNIPROTKB|E7ETS6 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:16289 IPI:IPI01021215
ProteinModelPortal:E7ETS6 SMR:E7ETS6 Ensembl:ENST00000552122
ArrayExpress:E7ETS6 Uniprot:E7ETS6
Length = 425
Score = 124 (48.7 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
+ K+ E+ CPICL +L V++ C H FC CI + ++ CP+CK + IR
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 65 AAPHMDNLVSVYKSMEVA 82
+ NLV ++++ +
Sbjct: 67 FNSLLRNLVEKIQALQAS 84
Score = 46 (21.3 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEES 388
++ N N+M G L K K N T++ + G TT N S
Sbjct: 310 KSMNKNDMKSWGLLQKNNHKMNKTSEPGSSSAG---GRTTSGPPNHHS 354
Score = 45 (20.9 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 118 HQGTSKGKRFRRTSKATVEPS----GTVCTKPSCPTKKRVQVAQYPLPET 163
H+GT GK + +++ + ++ TK + P ++ ++ AQ LP +
Sbjct: 208 HEGTEAGKHYVASTEPQLNDLKKLVDSLKTKQNMPPRQLLEPAQPHLPRS 257
Score = 41 (19.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 30/165 (18%), Positives = 64/165 (38%)
Query: 221 TETDAYITPPDVPSFSDLKDSED-ISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSP 279
TE + P +DLK D + + + P ++ + SE F++ +P
Sbjct: 211 TEAGKHYVASTEPQLNDLKKLVDSLKTKQNMPPRQLLEPAQP-HLPRSEEFQFL----NP 265
Query: 280 ELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALC 339
+P + ++++A+ + +L+ + F+ + N+N+ + L
Sbjct: 266 TPVPLELEKKLSEAKSRHDSITGSLKKFKDQLQADRKKDENRFFK--SMNKNDMKSWGLL 323
Query: 340 PRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATS 384
+N N K+NK +S+A + N S+ P+ S
Sbjct: 324 QKN--------NHKMNKTSEPGSSSAGGRTTSGPPNHHSSAPSHS 360
>UNIPROTKB|F8W1J7 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 IPI:IPI01021230
ProteinModelPortal:F8W1J7 SMR:F8W1J7 Ensembl:ENST00000550336
Uniprot:F8W1J7
Length = 425
Score = 124 (48.7 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
+ K+ E+ CPICL +L V++ C H FC CI + ++ CP+CK + IR
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 65 AAPHMDNLVSVYKSMEVA 82
+ NLV ++++ +
Sbjct: 67 FNSLLRNLVEKIQALQAS 84
Score = 46 (21.3 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEES 388
++ N N+M G L K K N T++ + G TT N S
Sbjct: 310 KSMNKNDMKSWGLLQKNNHKMNKTSEPGSSSAG---GRTTSGPPNHHS 354
Score = 45 (20.9 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 118 HQGTSKGKRFRRTSKATVEPS----GTVCTKPSCPTKKRVQVAQYPLPET 163
H+GT GK + +++ + ++ TK + P ++ ++ AQ LP +
Sbjct: 208 HEGTEAGKHYVASTEPQLNDLKKLIDSLKTKQNMPPRQLLEPAQPHLPRS 257
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 351 NGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATS 384
N K+NK +S+A + N S+ P+ S
Sbjct: 327 NHKMNKTSEPGSSSAGGRTTSGPPNHHSSAPSHS 360
>UNIPROTKB|F1RZ52 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 OMA:YEDWETD EMBL:CU311184
Ensembl:ENSSSCT00000001341 Ensembl:ENSSSCT00000036524
Uniprot:F1RZ52
Length = 545
Score = 131 (51.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACI--VKSMKSGSN-CPVCKVPYHRREIR 64
L + E+ C ICL L V++ C HVFC +C + + G CP+CK P+ + IR
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENIR 66
Query: 65 AAPHMDNLVSVYKSMEVASG 84
+ +LV + ++V +G
Sbjct: 67 PVWQLASLVENIERLKVDTG 86
Score = 47 (21.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 171 EGGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLR 209
EGGTV T E S ++ + L PF WLR
Sbjct: 502 EGGTVTFTNAE--SQELIYTFKATFTRR---LLPFLWLR 535
>UNIPROTKB|O77666 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:AJ251829 CTD:7726
eggNOG:NOG291505 KO:K12008 OrthoDB:EOG42821H RefSeq:NP_001116681.1
UniGene:Ssc.54632 ProteinModelPortal:O77666 GeneID:100144460
KEGG:ssc:100144460 Uniprot:O77666
Length = 545
Score = 131 (51.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACI--VKSMKSGSN-CPVCKVPYHRREIR 64
L + E+ C ICL L V++ C HVFC +C + + G CP+CK P+ + IR
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENIR 66
Query: 65 AAPHMDNLVSVYKSMEVASG 84
+ +LV + ++V +G
Sbjct: 67 PVWQLASLVENIERLKVDTG 86
Score = 47 (21.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 171 EGGTVKNTTGELKSSSVVIRENPVINKEGTVLSPFFWLR 209
EGGTV T E S ++ + L PF WLR
Sbjct: 502 EGGTVTFTNAE--SQELIYTFKATFTRR---LLPFLWLR 535
>UNIPROTKB|E2RDF6 [details] [associations]
symbol:RAG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070244 "negative regulation of thymocyte
apoptotic process" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0033151 "V(D)J recombination" evidence=IEA] [GO:0033077 "T cell
differentiation in thymus" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0002331 "pre-B cell
allelic exclusion" evidence=IEA] InterPro:IPR001841
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR019485
InterPro:IPR024627 Pfam:PF10426 Pfam:PF12940 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 GO:GO:0005634
GO:GO:0043154 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.160.60 GO:GO:0033077 GO:GO:0070244 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004519 GO:GO:0004842 InterPro:IPR017907
GO:GO:0051865 GO:GO:0002331 GO:GO:0010390 GO:GO:0033151 CTD:5896
KO:K10628 InterPro:IPR023336 PANTHER:PTHR11539 PROSITE:PS51487
OMA:CDGMGDV GeneTree:ENSGT00390000008679 EMBL:AAEX03011372
RefSeq:XP_540538.1 ProteinModelPortal:E2RDF6
Ensembl:ENSCAFT00000010954 GeneID:483420 KEGG:cfa:483420
NextBio:20857813 Uniprot:E2RDF6
Length = 1043
Score = 125 (49.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 13 RELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKS-GSNCPVCKVPYHRREIRAAPHMDN 71
+ + C IC +L+ V TC HVFC CI++ +K+ GS CP C+ P ++ + +
Sbjct: 289 KSISCRICEHILADPVETTCKHVFCRVCILRRLKATGSYCPCCRYPCFPTDLESPGR--S 346
Query: 72 LVSVYKSMEV 81
+S+ S+ V
Sbjct: 347 FLSILNSLMV 356
Score = 60 (26.2 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 293 AEENGKGL---EAALQGSNTV--VDISNGNATCVIFEQGNGNENEGRCKALC 339
+E++G G E A++ S TV + ++ G+ + +FE+G N +E CK LC
Sbjct: 609 SEKHGGGPAVPEKAVRFSFTVMRITVAQGSESVQVFEEGKPN-SELCCKPLC 659
>UNIPROTKB|F1LN16 [details] [associations]
symbol:Chfr "Protein Chfr" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 RGD:1306360 Prosite:PS00518
GO:GO:0000166 GO:GO:0046872 GO:GO:0016605 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
InterPro:IPR017907 GO:GO:0000278 GeneTree:ENSGT00400000022306
OMA:LYWGCAR IPI:IPI00190180 Ensembl:ENSRNOT00000056639
ArrayExpress:F1LN16 Uniprot:F1LN16
Length = 664
Score = 132 (51.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 51/185 (27%), Positives = 79/185 (42%)
Query: 9 EKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAP 67
+KM L C IC LL VSL C H FC AC M+ S CP C+ P R I
Sbjct: 295 DKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER--ICKNH 352
Query: 68 HMDNLVSVYKSMEV-ASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGKR 126
++NLV Y S V ++ K + D++ +V D+ +G+S+
Sbjct: 353 ILNNLVEAYLLQHPDKSRSEEDVRSMDARNKITQDML-QPKVRRSFSDE---EGSSEDLL 408
Query: 127 FRR---TSKATVEPSGTVCTKPSCPTKKR--VQVAQYPLPETPTQPAKLEGGTVKNTTGE 181
+ + + VC + CP +R VQ P+PE+ + GG +T+
Sbjct: 409 ELSDVDSESSDISQPYIVCRQ--CPEYRRQAVQSLPCPVPESELGATQALGGEAPSTSAS 466
Query: 182 LKSSS 186
L +++
Sbjct: 467 LTTAA 471
>UNIPROTKB|A6H736 [details] [associations]
symbol:RNF166 "RNF166 protein" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 Prosite:PS00518
Pfam:PF05605 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 GeneTree:ENSGT00530000063064
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:115992 eggNOG:NOG149065
OrthoDB:EOG4DJJX8 OMA:LVKHCVD EMBL:DAAA02046253 EMBL:BC146099
IPI:IPI00690931 RefSeq:NP_001092604.1 UniGene:Bt.62253
Ensembl:ENSBTAT00000027892 GeneID:614210 KEGG:bta:614210
InParanoid:A6H736 NextBio:20898997 Uniprot:A6H736
Length = 237
Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 14 ELKCPICLSLLSSAVSL-TCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAAPHMDN 71
+ CPICL + V++ +C H FC C+ ++ S CP+C++P+ +++ A H++
Sbjct: 30 QYSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKAAHVEK 89
Query: 72 LVSVYKS 78
++ YK+
Sbjct: 90 QLASYKA 96
>UNIPROTKB|Q640S6 [details] [associations]
symbol:trim72 "Tripartite motif-containing protein 72"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0001778 "plasma
membrane repair" evidence=ISS] [GO:0001786 "phosphatidylserine
binding" evidence=ISS] [GO:0003012 "muscle system process"
evidence=ISS] [GO:0007517 "muscle organ development" evidence=ISS]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=ISS]
[GO:0042383 "sarcolemma" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
GO:GO:0042383 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007517
GO:GO:0030659 GO:GO:0006887 GO:GO:0001786 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 HSSP:Q99728 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GO:GO:0001778 GO:GO:0003012
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:493829
eggNOG:NOG305247 KO:K12036 OrthoDB:EOG498V10 EMBL:BC082513
RefSeq:NP_001008188.1 UniGene:Str.22911 ProteinModelPortal:Q640S6
Ensembl:ENSXETT00000056209 GeneID:493550 KEGG:xtr:493550
Xenbase:XB-GENE-5896447 InParanoid:Q640S6 OMA:AFHERFT
Uniprot:Q640S6
Length = 477
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 42/188 (22%), Positives = 83/188 (44%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKS----GSN-CPVCKVPYHRRE 62
++ M ++L CP+CL L + V+ C H FC C+ + K+ GS CP C+ P
Sbjct: 7 MQGMQKDLTCPLCLELFRAPVTPECGHTFCQGCLTGAPKNQDQNGSTPCPTCQTPSRPET 66
Query: 63 IRAAPHMDNLVSVYKS------MEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKV 116
++ +++LV +K +E ++++ QD+ +LICG + G + K
Sbjct: 67 LQINRQLEHLVQSFKQVPKGHCLEHLDPLSVYCEQDK-------ELICGVCASLG-KHK- 117
Query: 117 EHQGTSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVK 176
H + + + + K + + + +K V V + E ++ +G VK
Sbjct: 118 GHNIITAAEAYAKL-KRQLPQQQVILQEARLKKEKTVAVLDRQVAEVQDTVSRFKGN-VK 175
Query: 177 NTTGELKS 184
+ ++S
Sbjct: 176 HQLNAMRS 183
>UNIPROTKB|E2QTS9 [details] [associations]
symbol:TRIM26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
Ensembl:ENSCAFT00000019412 Uniprot:E2QTS9
Length = 492
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACI--VKSMKSGSN-CPVCKVPYHRREIR 64
L + E+ C ICL L V++ C HVFC C V+ + G CP+CK P+ + IR
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRGCTTDVRPVSGGRPVCPLCKKPFKKENIR 66
Query: 65 AAPHMDNLVSVYKSMEV 81
+ +LV + ++V
Sbjct: 67 PVWQLASLVENIERLKV 83
>ZFIN|ZDB-GENE-040426-745 [details] [associations]
symbol:rad18 "RAD18 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
Prosite:PS00518 ZFIN:ZDB-GENE-040426-745 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P28990 eggNOG:COG5432
KO:K10627 CTD:56852 HOGENOM:HOG000234845 HOVERGEN:HBG054721
OrthoDB:EOG4RFKTF EMBL:BC044430 IPI:IPI00608781 RefSeq:NP_956431.1
UniGene:Dr.81359 ProteinModelPortal:Q803L3 STRING:Q803L3
GeneID:393106 KEGG:dre:393106 InParanoid:Q803L3 NextBio:20814179
ArrayExpress:Q803L3 Uniprot:Q803L3
Length = 426
Score = 129 (50.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 6 SHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRA 65
S L+ M L+CPIC L+ ++ C+H FC+ CI K + CPVC P +++R
Sbjct: 14 SCLKPMDTLLRCPICFEFLNISMMTQCSHNFCSLCIRKFLSYKLLCPVCNSPSTEQDLRN 73
Query: 66 APHMDNLVSVYKS 78
+D+LV +++
Sbjct: 74 NRLLDDLVQSFQT 86
>UNIPROTKB|Q864U1 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9913 "Bos taurus" [GO:0005694 "chromosome"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISS]
[GO:0085020 "protein K6-linked ubiquitination" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0045717
"negative regulation of fatty acid biosynthetic process"
evidence=ISS] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006633
"fatty acid biosynthetic process" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 EMBL:AY077732 IPI:IPI00687086 RefSeq:NP_848668.1
UniGene:Bt.14026 ProteinModelPortal:Q864U1 SMR:Q864U1 STRING:Q864U1
PRIDE:Q864U1 GeneID:353120 KEGG:bta:353120 CTD:672
HOGENOM:HOG000230969 HOVERGEN:HBG050730 InParanoid:Q864U1 KO:K10605
OrthoDB:EOG42RD7C NextBio:20812700 InterPro:IPR025994 Pfam:PF12820
Uniprot:Q864U1
Length = 1849
Score = 143 (55.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS----VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVT----GGCQDKV 116
+ LV + + E+ +G+ + + S + + E+V+ G +++
Sbjct: 75 ESTRFSQLVEELLKIIHAFELDTGLQFANSYNFSRKEDNSPEHLKEEVSIIQSMGYRNRA 134
Query: 117 EH--QGTSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQ 154
+ Q + + TS TVE S + S TK++ Q
Sbjct: 135 KRLWQSEPENPTLQETS-LTVELSNLGIVR-SLRTKQQTQ 172
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 331 NEGRCKALCPRNTNPNNMIENGKLN---KKGRK----ANSTAQKKYAKRDTNKGSTTPAT 383
N+ +CK P + I+ L K K + T QK + T+ G
Sbjct: 498 NKLKCKRRGTSGLQPEDFIKKVDLTIVPKTPEKMTEGTDQTEQKCHGMNITSDGH----- 552
Query: 384 SNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPI 419
N+ ++VQK+ + + A+ +K S R AEPI
Sbjct: 553 ENKTKRDYVQKEQNANPAESLEKESVFR--TEAEPI 586
Score = 46 (21.3 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 31/136 (22%), Positives = 54/136 (39%)
Query: 278 SPELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATC------VIFEQGNGNEN 331
S E+L K V+D EE GLE VD G A + E G G +
Sbjct: 1325 SEEVLSD--KELVSDDEERETGLEEDSCQEEQSVDSDLGEAVSDHVSETSLSEDGVGLSS 1382
Query: 332 EGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENF 391
+ R+T +N++ KL ++ + + ++ ++ + S T + E
Sbjct: 1383 QSDILTTQQRDTMQDNLL---KLQQEMAELEAVLERHGSQPSHSSASLTADSRGPEHLLN 1439
Query: 392 VQKQTSISNAKFSQKS 407
+++ TS S+KS
Sbjct: 1440 LEQDTSERAILTSEKS 1455
Score = 45 (20.9 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 37/203 (18%), Positives = 73/203 (35%)
Query: 208 LRDEEDREKSSQHTETDAYITPPDVPSFSDLKDSEDISSSELSPTAEVHGKSDGLDFFES 267
+ D ++ S+H TP ++ + ++K++ + S++ + V +S F
Sbjct: 1124 ISDNLEQPTGSRHASQVCSETPDNLLNDDEIKENSHFAESDIKERSAVFSESVQKGEFRG 1183
Query: 268 EI--FEWTQRACSPELLPSPAKTQ--VADAEENGKGLEAALQGSNTVVDISNGNATCVIF 323
F T A + +++ V+ +E + L G T +S +
Sbjct: 1184 SPGPFTHTHLAQGHQRGAGKLESEETVSSEDEELPCFQQLLFGKVTST-LSPSTGCNTVA 1242
Query: 324 EQGNGNENEGRCKAL------CPRNTNPNNMIENGKLNKKGRKANSTAQKKY-AKRD--T 374
+G E EG ++L C + + LN++ R + S + A D T
Sbjct: 1243 TEGLSKETEGNLESLKSGLNDCSGQVTSAKVSQEHHLNEEARCSGSLFSSQCSAMEDLTT 1302
Query: 375 NKGSTTPATSNEESENFVQKQTS 397
N + P E V + S
Sbjct: 1303 NTNTQDPFLMFERPSKQVYQSES 1325
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 367 KKYAKRDTNKGSTTPATSNEE---SENFVQK------QTSISNAKFSQKSSNRRGTCAAE 417
K K+ ++ P TS E+ SE+ +Q Q +I + F + SSN +
Sbjct: 985 KTICKKSPSEKFEEPVTSPEKTLGSESIIQSAVSTISQNNIQESTFKEVSSNSVNEVGSS 1044
Query: 418 PIPDNVLAASVRTEIVDQHGKNIGSD 443
N + +SV V G+NI ++
Sbjct: 1045 T---NEVGSSVNE--VGSSGENIQAE 1065
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 549 DKELQWNKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS 597
+K L ++++ S IS++ + ES +E S++ NE S GSS
Sbjct: 1004 EKTLGSESIIQSAVSTISQNN-IQESTFKEVSSNSVNEVGSSTNEVGSS 1051
>UNIPROTKB|B0V1M0 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 UniGene:Hs.493275
HGNC:HGNC:16289 eggNOG:NOG310139 OrthoDB:EOG4K0QNJ EMBL:CR925727
IPI:IPI00892854 SMR:B0V1M0 Ensembl:ENST00000422484 Uniprot:B0V1M0
Length = 248
Score = 124 (48.7 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
+ K+ E+ CPICL +L V++ C H FC CI + ++ CP+CK + IR
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 65 AAPHMDNLVSVYKSMEVA 82
+ NLV ++++ +
Sbjct: 67 FNSLLRNLVEKIQALQAS 84
>RGD|1306360 [details] [associations]
symbol:Chfr "checkpoint with forkhead and ring finger domains,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000278 "mitotic cell cycle"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016605 "PML
body" evidence=ISO] [GO:0019941 "modification-dependent protein
catabolic process" evidence=ISO] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 Pfam:PF13639
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
RGD:1306360 Prosite:PS00518 GO:GO:0000166 GO:GO:0046872
GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
EMBL:CH473973 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 GO:GO:0007093 GO:GO:0019941
InterPro:IPR017907 CTD:55743 eggNOG:NOG253207 HOGENOM:HOG000290186
KO:K10644 OrthoDB:EOG43FGWJ HOVERGEN:HBG048005 IPI:IPI00190180
EMBL:BC087162 RefSeq:NP_001009258.1 UniGene:Rn.15515 SMR:Q5PQJ8
STRING:Q5PQJ8 GeneID:288734 KEGG:rno:288734 UCSC:RGD:1306360
InParanoid:Q5PQJ8 NextBio:628621 Genevestigator:Q5PQJ8
Uniprot:Q5PQJ8
Length = 663
Score = 131 (51.2 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 51/184 (27%), Positives = 78/184 (42%)
Query: 9 EKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAP 67
+KM L C IC LL VSL C H FC AC M+ S CP C+ P R I
Sbjct: 295 DKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER--ICKNH 352
Query: 68 HMDNLVSVYKSMEV-ASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGKR 126
++NLV Y S V ++ K + D++ +V D+ +G+S+
Sbjct: 353 ILNNLVEAYLLQHPDKSRSEEDVRSMDARNKITQDML-QPKVRRSFSDE---EGSSEDLL 408
Query: 127 FRR---TSKATVEPSGTVCTKPSCPTKKR--VQVAQYPLPETPTQPAKLEGGTVKNTTGE 181
+ + + VC + CP +R VQ P+PE+ + GG +T+
Sbjct: 409 ELSDVDSESSDISQPYIVCRQ--CPEYRRQAVQSLPCPVPESELGATQALGGEAPSTSAS 466
Query: 182 LKSS 185
L ++
Sbjct: 467 LTTA 470
>UNIPROTKB|G3X823 [details] [associations]
symbol:TRIM26 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 OMA:YEDWETD EMBL:DAAA02055411
Ensembl:ENSBTAT00000050226 Uniprot:G3X823
Length = 546
Score = 138 (53.6 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACI--VKSMKSGSN-CPVCKVPYHRREIR 64
L + E+ C ICL L V++ C HVFC +C ++S+ G CP+CK P+ + IR
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIRSISGGRPVCPLCKKPFKKENIR 66
Query: 65 AAPHMDNLVSVYKSMEVASG 84
+ +LV + ++V G
Sbjct: 67 PVWQLASLVENIERLKVDRG 86
Score = 38 (18.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 210 DEEDREKSSQHTETDAYITPPDVPSFSDLKDSEDISSSEL 249
+EE+ E++ D + T D S D ++ + E+
Sbjct: 401 EEEEEEEAGYRDGYDDWETDEDEESLGDEEEEAEEEEEEV 440
>UNIPROTKB|C9J8A5 [details] [associations]
symbol:TRIM10 "Tripartite motif-containing protein 10"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:AL671859 HOGENOM:HOG000234133 eggNOG:NOG301877 EMBL:AL844220
EMBL:BX005441 EMBL:BX927221 EMBL:CR753815 EMBL:CR759838
EMBL:CR788282 HGNC:HGNC:10072 ChiTaRS:TRIM10 IPI:IPI00872419
SMR:C9J8A5 Ensembl:ENST00000546716 Ensembl:ENST00000548533
Ensembl:ENST00000548891 Ensembl:ENST00000551474
Ensembl:ENST00000551591 Ensembl:ENST00000553004
Ensembl:ENST00000553167 Uniprot:C9J8A5
Length = 481
Score = 129 (50.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVK-------SMKSGSNCPVCKVPYHRREIRAA 66
E+ CPIC L V++ C H FC AC+ + ++ CP+CK P+ R
Sbjct: 13 EVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSFRPN 72
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLI---CGE---QVTGGCQDKVEHQG 120
+ N+V + +++ S + + +E + G+ I C + Q+ C++ EH
Sbjct: 73 WQLANVVENIERLQLVSTLGL---GEEDVCQEHGEKIYFFCEDDEMQLCVVCREAGEH-- 127
Query: 121 TSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQ 157
+ RF + A C K C K+R ++ +
Sbjct: 128 ATHTMRFLEDAAAPYREQIHKCLK--CLRKEREEIQE 162
>UNIPROTKB|Q9UDY6 [details] [associations]
symbol:TRIM10 "Tripartite motif-containing protein 10"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 EMBL:BA000025 EMBL:CH471081 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:AL669914 EMBL:AL671859 HOGENOM:HOG000234133 HOVERGEN:HBG001357
CTD:10107 eggNOG:NOG301877 KO:K12002 OrthoDB:EOG4BG8W2 EMBL:Y07829
EMBL:AF220122 EMBL:AF220123 EMBL:AB202085 EMBL:AB103595
EMBL:AB088089 EMBL:AL844220 EMBL:BX005441 EMBL:BX927221
EMBL:CR753815 EMBL:CR759838 EMBL:CR788282 EMBL:BC093926
EMBL:BC113419 IPI:IPI00009524 IPI:IPI00216582 RefSeq:NP_006769.2
RefSeq:NP_439893.2 UniGene:Hs.709483 ProteinModelPortal:Q9UDY6
SMR:Q9UDY6 IntAct:Q9UDY6 STRING:Q9UDY6 PhosphoSite:Q9UDY6
DMDM:50403805 PRIDE:Q9UDY6 Ensembl:ENST00000259941
Ensembl:ENST00000354038 Ensembl:ENST00000376704
Ensembl:ENST00000413055 Ensembl:ENST00000416714
Ensembl:ENST00000417411 Ensembl:ENST00000426996
Ensembl:ENST00000428611 Ensembl:ENST00000431258
Ensembl:ENST00000446013 Ensembl:ENST00000447465
Ensembl:ENST00000448645 Ensembl:ENST00000449208
Ensembl:ENST00000449742 Ensembl:ENST00000451727
Ensembl:ENST00000456988 GeneID:10107 KEGG:hsa:10107 UCSC:uc003npo.3
GeneCards:GC06M030119 H-InvDB:HIX0032788 HGNC:HGNC:10072
HPA:HPA043325 MIM:605701 neXtProt:NX_Q9UDY6 PharmGKB:PA35536
InParanoid:Q9UDY6 OMA:EEPPTCP ChiTaRS:TRIM10 GenomeRNAi:10107
NextBio:38229 ArrayExpress:Q9UDY6 Bgee:Q9UDY6 CleanEx:HS_TRIM10
Genevestigator:Q9UDY6 GermOnline:ENSG00000204613 Uniprot:Q9UDY6
Length = 481
Score = 129 (50.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVK-------SMKSGSNCPVCKVPYHRREIRAA 66
E+ CPIC L V++ C H FC AC+ + ++ CP+CK P+ R
Sbjct: 13 EVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSFRPN 72
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLI---CGE---QVTGGCQDKVEHQG 120
+ N+V + +++ S + + +E + G+ I C + Q+ C++ EH
Sbjct: 73 WQLANVVENIERLQLVSTLGL---GEEDVCQEHGEKIYFFCEDDEMQLCVVCREAGEH-- 127
Query: 121 TSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQ 157
+ RF + A C K C K+R ++ +
Sbjct: 128 ATHTMRFLEDAAAPYREQIHKCLK--CLRKEREEIQE 162
>MGI|MGI:104537 [details] [associations]
symbol:Brca1 "breast cancer 1" species:10090 "Mus musculus"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0005813 "centrosome" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006260 "DNA
replication" evidence=IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IMP] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006631 "fatty acid metabolic
process" evidence=IEA] [GO:0006633 "fatty acid biosynthetic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=ISO] [GO:0007098
"centrosome cycle" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IDA]
[GO:0010212 "response to ionizing radiation" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0035066 "positive regulation of histone acetylation"
evidence=ISO;IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0043009 "chordate embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=ISO] [GO:0045739
"positive regulation of DNA repair" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051298 "centrosome duplication"
evidence=TAS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO;IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO;IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=ISO;IMP] [GO:0070531 "BRCA1-A complex"
evidence=ISO] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] [GO:0071681 "cellular response to
indole-3-methanol" evidence=ISO] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISO] [GO:2000145 "regulation of cell
motility" evidence=ISO] [GO:2000617 "positive regulation of histone
H3-K9 acetylation" evidence=ISO;IMP] [GO:2000620 "positive
regulation of histone H4-K16 acetylation" evidence=ISO;IMP]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 MGI:MGI:104537 Pfam:PF00533 Prosite:PS00518
GO:GO:0005737 GO:GO:0005813 GO:GO:0008630 GO:GO:0005654
GO:GO:0051298 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0045944 GO:GO:0006633
GO:GO:0003723 GO:GO:0044212 GO:GO:0045717 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794
GO:GO:0004842 GO:GO:0006349 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
Reactome:REACT_27235 GO:GO:0031436 GO:GO:0085020 GO:GO:0051572
eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969
HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994
Pfam:PF12820 GO:GO:0051573 GO:GO:0051571 GO:GO:2000617
GO:GO:2000620 GO:GO:0070512 EMBL:U31625 EMBL:U35641 EMBL:U32446
EMBL:U36475 EMBL:AL590996 EMBL:U33835 IPI:IPI00331711
IPI:IPI00421063 PIR:I49350 RefSeq:NP_033894.3 UniGene:Mm.244975
ProteinModelPortal:P48754 DIP:DIP-41981N STRING:P48754
PhosphoSite:P48754 PRIDE:P48754 Ensembl:ENSMUST00000017290
GeneID:12189 KEGG:mmu:12189 GeneTree:ENSGT00440000034289
InParanoid:P48754 OMA:CMLKLLN NextBio:280581 CleanEx:MM_BRCA1
Genevestigator:P48754 GermOnline:ENSMUSG00000017146 GO:GO:0043009
GO:GO:0009048 GO:GO:0035067 GO:GO:0051574 GO:GO:0044030
Uniprot:P48754
Length = 1812
Score = 145 (56.1 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 106/510 (20%), Positives = 198/510 (38%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 LHAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQ 74
Query: 65 AAPHM----DNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQG 120
+ + L+ + + E+ +G+ + T S +K + C E++ ++ Q
Sbjct: 75 GSTRFSQLAEELLRIMAAFELDTGMQL--TNGFSFSKKRNNS-C-ERLN---EEASIIQS 127
Query: 121 TSKGKRFRRTSKATVEPSGTVCTKPSCPTK-KRVQVAQYPLPETPTQPAK------LEGG 173
R RR + VEP G K S + + + + TQP K L+
Sbjct: 128 VGYRNRVRRLPQ--VEP-GNATLKDSLGVQLSNLGIVRSVKKNRQTQPRKKSVYIELDSD 184
Query: 174 TVKNTTGELKSSSV----VIRENPV-INKEGTVLSPFFWLRDEEDREKSSQHTETDAYIT 228
+ + T + SV +++ P EG + S + + ++ +H + +
Sbjct: 185 SSEETVTKPGDCSVRDQELLQTAPQEAGDEGKLHSAEEAACEFSEGIRNIEHHQCSDDLN 244
Query: 229 PPD---VPSFSDLKDSEDISSSELSPTA-EVHGKSDGLDFFESEIFEWTQRACSPELLPS 284
P + + S IS+ + P + H S + + E A E
Sbjct: 245 PTENHATERHPEKCQSISISNVCVEPCGTDAHASSLQPETSSLLLIEDRMNAEKAEFCNK 304
Query: 285 PAKTQVADAEENGKGLEAALQGSNTVVDI-SNGNATCVIFEQGNGNENEGRCKALCPRNT 343
+ +A ++++ AA +G+ + S G + + E ++LCP N+
Sbjct: 305 SKQPGIAVSQQSRW---AASKGTCNDRQVPSTGEKVGPNADSLSDREKWTHPQSLCPENS 361
Query: 344 NPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKF 403
+ LN +K N + ++ S SN E+ ++ +SN
Sbjct: 362 GATTDVPWITLNSSVQKVNEWFSRTGEMLTSDSASARRHESNAEAAVVLE----VSNEVD 417
Query: 404 SQKSSNRRGTCAAEPIPDNVLAASVRTEIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKT 463
SS+R+ T P P + L + NI + +++GS L+ +
Sbjct: 418 GGFSSSRK-TDLVTPDPHHTLMCKSGRDFSKPVEDNISDKIFGKSYQRKGSRPHLNHVTE 476
Query: 464 RKKCWKINSQT--EEDFCTKSKRRKVDSTE 491
+ Q E+ F K KR++ S +
Sbjct: 477 IIGTFITEPQITQEQPFTNKLKRKRSTSLQ 506
Score = 51 (23.0 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 742 TSSNLPNENPGSQESRKKCISKKLLTQH 769
TS N+ NENP SQ + C K L QH
Sbjct: 1412 TSKNI-NENPVSQNLKSACDDKFQL-QH 1437
Score = 39 (18.8 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 710 KTCRKSFHVPCAKLILQCRWDTDNFVMLCPLHT 742
KT +S L+ +DT N V + HT
Sbjct: 750 KTTDRSEESTSVSLVSDTDYDTQNSVSVLDAHT 782
>UNIPROTKB|F1Q125 [details] [associations]
symbol:TRIM68 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 OMA:MQKLEQN EMBL:AAEX03012846
Ensembl:ENSCAFT00000009822 Uniprot:F1Q125
Length = 438
Score = 128 (50.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 3 DQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV-------KSMKSGSNCPVCK 55
D + +E + E+ CPIC++ L VS+ C H FC++C+ +S G CP+C+
Sbjct: 2 DPAALVEAIVEEVACPICMTFLREPVSIDCGHSFCHSCLSGLWEVPGESQNWGYTCPLCR 61
Query: 56 VPYHRREIRAAPHMDNLVSVYKSMEVASGINI 87
P R +R + N+V + + G+ +
Sbjct: 62 APVQPRNLRPNWQLANVVEKVHLLGLHPGMGL 93
>RGD|1359645 [details] [associations]
symbol:Trim40 "tripartite motif-containing 40" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
RGD:1359645 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX883051 CTD:135644 eggNOG:NOG263238
HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016 OrthoDB:EOG4W9J4P
IPI:IPI00422032 RefSeq:NP_001009175.1 UniGene:Rn.215808
ProteinModelPortal:Q6MFY8 PRIDE:Q6MFY8 GeneID:365528
KEGG:rno:365528 UCSC:RGD:1359645 InParanoid:Q6MFY8 NextBio:687589
Genevestigator:Q6MFY8 Uniprot:Q6MFY8
Length = 247
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS-----NCPVCKVP 57
L+K +++ CPICL L AVS C H+FC C+++ M S +CPVC+ P
Sbjct: 4 LDKDNQDI-CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKP 57
>UNIPROTKB|Q6MFY8 [details] [associations]
symbol:Trim40 "Tripartite motif-containing protein 40"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 RGD:1359645 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BX883051 CTD:135644
eggNOG:NOG263238 HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016
OrthoDB:EOG4W9J4P IPI:IPI00422032 RefSeq:NP_001009175.1
UniGene:Rn.215808 ProteinModelPortal:Q6MFY8 PRIDE:Q6MFY8
GeneID:365528 KEGG:rno:365528 UCSC:RGD:1359645 InParanoid:Q6MFY8
NextBio:687589 Genevestigator:Q6MFY8 Uniprot:Q6MFY8
Length = 247
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS-----NCPVCKVP 57
L+K +++ CPICL L AVS C H+FC C+++ M S +CPVC+ P
Sbjct: 4 LDKDNQDI-CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKP 57
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVC 54
E + CPIC ++ A C H FC CI +S++ + CP C
Sbjct: 33 EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKC 78
>UNIPROTKB|Q5ZKJ1 [details] [associations]
symbol:BARD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031436 "BRCA1-BARD1 complex" evidence=IEA] [GO:0042325
"regulation of phosphorylation" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0085020 "protein K6-linked ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50089
SMART:SM00184 SMART:SM00248 InterPro:IPR001357 Pfam:PF00097
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0043066
GO:GO:0042325 GO:GO:0046872 eggNOG:COG0666 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00550000074487 InterPro:IPR017907
GO:GO:0070531 GO:GO:0031436 CTD:580 HOGENOM:HOG000237306
HOVERGEN:HBG050662 KO:K10683 OMA:KKNSIKM OrthoDB:EOG4FFD1B
GO:GO:0046826 GO:GO:0085020 EMBL:AADN02034496 EMBL:AJ720093
IPI:IPI00651430 RefSeq:NP_001026417.1 UniGene:Gga.22527 SMR:Q5ZKJ1
STRING:Q5ZKJ1 Ensembl:ENSGALT00000005512 GeneID:424010
KEGG:gga:424010 InParanoid:Q5ZKJ1 NextBio:20826397 Uniprot:Q5ZKJ1
Length = 750
Score = 129 (50.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 44/166 (26%), Positives = 69/166 (41%)
Query: 5 RSHLEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREI 63
R+ LE++ R L C C +L VSL C HVFC +C+ + G CPVC VP +++
Sbjct: 9 RAALERLERALSCSRCAGVLREPVSLGGCEHVFCLSCMGDHV--GKGCPVCHVPAWVQDM 66
Query: 64 RAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSK 123
+ +D++V + + + + + T D GE G Q K+ S+
Sbjct: 67 QINRQLDDMVQLCGKLRHLLDAGTSDSMESTPTPMCSDF--GENSKKG-QIKMWFSPRSR 123
Query: 124 GKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAK 169
R S +C PS P+ E P++P K
Sbjct: 124 KIRCIVNKNQPKTNSNDLCQDPSSV----YHFFPSPVHEKPSKPRK 165
Score = 50 (22.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 739 PLHTSSNLPNENPGSQESRKKCISKKLLTQHNK 771
P+H + P + P ++S+K + KK L NK
Sbjct: 155 PVHEKPSKPRKKPTQRQSKK--MKKKRLADINK 185
Score = 50 (22.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/97 (22%), Positives = 41/97 (42%)
Query: 301 EAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALCP----RNTN----PNNMIENG 352
E Q S VD + + + ++ E KA+CP + TN + IE+
Sbjct: 227 ETLPQESIQEVDSTKNLVEVEVSPEVKSSQEEDNSKAVCPVQVSKETNCAAEKSPSIESK 286
Query: 353 KLN-KKGRKANSTAQKKYAKRDTNKGSTTPATSNEES 388
++ K+GR+ + KR ++GS + ++ S
Sbjct: 287 AMHLKRGREQSKLPGTSQTKRRRSEGSLNRNSDSQTS 323
>UNIPROTKB|K7GRL1 [details] [associations]
symbol:TRIM58 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101646 EMBL:AEMK01179769
EMBL:CU856331 EMBL:FP312918 Ensembl:ENSSSCT00000033610
Uniprot:K7GRL1
Length = 324
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK------SMKSGSN-CPVCKVPYHRR 61
E++ E +CP+CL L + VS+ C H FC CI + S +SG CP C+ P+ +
Sbjct: 8 ERLCEEARCPVCLDFLQNPVSVDCGHSFCLKCISEFCEKSDSAQSGLYACPQCRGPFRQE 67
Query: 62 EIRAAPHMDNLVSVYKSMEVASG 84
R + +LV + + + +G
Sbjct: 68 NFRPNRQLASLVESVRQLGLGAG 90
>TAIR|locus:2160215 [details] [associations]
symbol:AT5G54990 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
EMBL:AB005232 IPI:IPI00548980 RefSeq:NP_200310.1 UniGene:At.55556
ProteinModelPortal:Q9FFT1 SMR:Q9FFT1 EnsemblPlants:AT5G54990.1
GeneID:835590 KEGG:ath:AT5G54990 TAIR:At5g54990 eggNOG:NOG321518
HOGENOM:HOG000152444 InParanoid:Q9FFT1 OMA:RYISTES PhylomeDB:Q9FFT1
ProtClustDB:CLSN2916571 Genevestigator:Q9FFT1 Uniprot:Q9FFT1
Length = 226
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 15 LKCPICLSLLSSAVS---LTCNHVFCNACIVKSMKSGSNCPVCKVPYHRREI 63
L CPICL+ LSS VS L C+HVF CI+ +K +CP+C+ H + +
Sbjct: 172 LDCPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICRTKAHGKTV 223
>MGI|MGI:2444898 [details] [associations]
symbol:Chfr "checkpoint with forkhead and ring finger
domains" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007093 "mitotic cell cycle
checkpoint" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0016605 "PML body" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019941 "modification-dependent protein catabolic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 MGI:MGI:2444898
Prosite:PS00518 GO:GO:0051301 GO:GO:0007067 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 EMBL:CH466529
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0007093 InterPro:IPR017907 CTD:55743 eggNOG:NOG253207
GeneTree:ENSGT00400000022306 KO:K10644 OMA:LYWGCAR
HOVERGEN:HBG048005 ChiTaRS:CHFR EMBL:AK052473 EMBL:AK077629
EMBL:AK147892 EMBL:AK154038 EMBL:AK155295 EMBL:AK155525
EMBL:AK169182 EMBL:AK169193 EMBL:BC049792 IPI:IPI00336194
IPI:IPI00400444 IPI:IPI00653343 IPI:IPI00944802 RefSeq:NP_766305.2
UniGene:Mm.30264 ProteinModelPortal:Q810L3 SMR:Q810L3 STRING:Q810L3
PhosphoSite:Q810L3 PRIDE:Q810L3 Ensembl:ENSMUST00000014812
Ensembl:ENSMUST00000112519 GeneID:231600 KEGG:mmu:231600
UCSC:uc008ypv.2 UCSC:uc008ypw.2 UCSC:uc008ypx.2 UCSC:uc008ypz.2
InParanoid:Q3TFD8 NextBio:380643 Bgee:Q810L3 CleanEx:MM_CHFR
Genevestigator:Q810L3 GermOnline:ENSMUSG00000014668 Uniprot:Q810L3
Length = 664
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 9 EKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAP 67
+KM L C IC LL VSL C H FC AC M+ S CP C+ P R I
Sbjct: 295 DKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER--ICKNH 352
Query: 68 HMDNLVSVYKSMEV-ASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGKR 126
++NLV Y S V ++ K + D++ +V D+ +G+S+
Sbjct: 353 ILNNLVEAYLIQHPDKSRSEEDVRSMDARNKITQDML-QPKVRRSFSDE---EGSSEDLL 408
Query: 127 FRR---TSKATVEPSGTVCTKPSCPTKKR--VQVAQYPLPETPTQPAKLEGGTVKNTTGE 181
+ + + VC + CP +R VQ P+PE+ GG +T+
Sbjct: 409 ELSDVDSESSDISQPYIVCRQ--CPEYRRQAVQSLPCPVPESELGATLALGGEAPSTSAS 466
Query: 182 LKSSS 186
L +++
Sbjct: 467 LPTAA 471
>UNIPROTKB|G3V6K9 [details] [associations]
symbol:Rag1 "Recombination activating gene 1" species:10116
"Rattus norvegicus" [GO:0002331 "pre-B cell allelic exclusion"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0033151 "V(D)J recombination" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0070244 "negative regulation of thymocyte
apoptotic process" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019485 InterPro:IPR024627 Pfam:PF10426 Pfam:PF12940
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 Pfam:PF00097 RGD:619790
Prosite:PS00518 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.160.60 GO:GO:0016788 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016881 InterPro:IPR017907 EMBL:CH473949
GO:GO:0033151 CTD:5896 KO:K10628 InterPro:IPR023336
PANTHER:PTHR11539 PROSITE:PS51487 OMA:CDGMGDV
GeneTree:ENSGT00390000008679 RefSeq:NP_445920.1 UniGene:Rn.92344
ProteinModelPortal:G3V6K9 Ensembl:ENSRNOT00000006115 GeneID:84600
KEGG:rno:84600 NextBio:617237 Uniprot:G3V6K9
Length = 1040
Score = 123 (48.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 13 RELKCPICLSLLSSAVSLTCNHVFCNACIVKSMK-SGSNCPVCKVPYHRREIRAAPHMDN 71
+ + C IC +L+ V TC H+FC CI++ +K GS CP C+ P ++++ P + +
Sbjct: 286 KSISCQICEHILADPVETTCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLQS-P-VKS 343
Query: 72 LVSVYKSMEV 81
+S+ S+ V
Sbjct: 344 FLSILNSLMV 353
Score = 58 (25.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/76 (31%), Positives = 27/76 (35%)
Query: 140 TVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTGELKSSSVVIRENPVINKEG 199
TV K SC V P P + + TV T E S +V I E P N E
Sbjct: 592 TVVVKESCDGMGDVSEKHGSGPAVPEKAVRFSF-TVMRVTVEHGSQNVKIFEEPKPNSEL 650
Query: 200 TVLSPFFWLRDEEDRE 215
L DE D E
Sbjct: 651 CCKPLCLMLADESDHE 666
>MGI|MGI:1929211 [details] [associations]
symbol:Rnf138 "ring finger protein 138" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 UniPathway:UPA00143 MGI:MGI:1929211
Prosite:PS00518 GO:GO:0016055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:P38398 GeneTree:ENSGT00530000063064
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:51444 eggNOG:NOG44750
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K EMBL:AB025010 EMBL:AB025011
EMBL:AK010486 EMBL:AK004238 EMBL:AK136138 EMBL:BC003712
IPI:IPI00123749 IPI:IPI00132441 RefSeq:NP_062680.2
RefSeq:NP_997506.1 UniGene:Mm.253542 ProteinModelPortal:Q9CQE0
SMR:Q9CQE0 IntAct:Q9CQE0 STRING:Q9CQE0 PhosphoSite:Q9CQE0
PRIDE:Q9CQE0 Ensembl:ENSMUST00000052396 Ensembl:ENSMUST00000072847
GeneID:56515 KEGG:mmu:56515 UCSC:uc008efb.1 UCSC:uc008efc.1
InParanoid:Q9CQE0 NextBio:312826 Bgee:Q9CQE0 CleanEx:MM_RNF138
Genevestigator:Q9CQE0 GermOnline:ENSMUSG00000024317 Uniprot:Q9CQE0
Length = 245
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 17 CPICLSLLSSAV-SLTCNHVFCNACIVKSMK-SGSNCPVCKVPYHRREIRAAP 67
CP+C +L + V + C HVFC C + +M+ SG +CP+C+ RRE RA P
Sbjct: 18 CPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVTRRE-RACP 69
>UNIPROTKB|E2R173 [details] [associations]
symbol:TRIM21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 EMBL:AAEX03012839
Ensembl:ENSCAFT00000009720 OMA:GQNANEV Uniprot:E2R173
Length = 469
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 31/87 (35%), Positives = 44/87 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAA 66
L M E+ CPICL + +S+ C H FC+ CI + K G CPVC+ + R +R
Sbjct: 7 LAMMWEEVTCPICLDPVVEPMSIDCGHSFCHKCISEVGKDGGGVCPVCQHTFLLRNLRPN 66
Query: 67 PHMDNLVSVYKSMEVASGINIFVTQDE 93
+ N+V K ++ N VTQ E
Sbjct: 67 WPLANVVDNLK--QIGQNANE-VTQRE 90
>RGD|1562871 [details] [associations]
symbol:RGD1562871 "similar to BMI1-like protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1562871 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:CH473969
IPI:IPI00361980 RefSeq:NP_001100405.1 UniGene:Rn.218687
Ensembl:ENSRNOT00000050807 GeneID:302366 KEGG:rno:302366
UCSC:RGD:1562871 CTD:302366 OrthoDB:EOG4XSKRX NextBio:649488
Uniprot:D4AE11
Length = 232
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRRE---- 62
L +M + C IC L A ++T C H FC +CIVK + + CP C + H +
Sbjct: 114 LSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFEHSNRCPKCNIIVHEAKPHNN 173
Query: 63 IRAAPHMDNLVSVYK 77
+R P + N+V YK
Sbjct: 174 LRMDPQLQNIV--YK 186
>MGI|MGI:1337056 [details] [associations]
symbol:Trim26 "tripartite motif-containing 26" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:1337056 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:CH466559 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00690000101808 CTD:7726 eggNOG:NOG291505 KO:K12008
EMBL:AF230395 EMBL:AF230396 EMBL:CR956641 EMBL:BC037110
EMBL:AK042252 IPI:IPI00170374 IPI:IPI00454186 RefSeq:NP_001020770.2
UniGene:Mm.34587 ProteinModelPortal:Q99PN3 SMR:Q99PN3 STRING:Q99PN3
PhosphoSite:Q99PN3 PRIDE:Q99PN3 Ensembl:ENSMUST00000053434
Ensembl:ENSMUST00000123715 Ensembl:ENSMUST00000130367 GeneID:22670
KEGG:mmu:22670 InParanoid:Q99PN3 NextBio:303085 Bgee:Q99PN3
CleanEx:MM_TRIM26 Genevestigator:Q99PN3
GermOnline:ENSMUSG00000024457 Uniprot:Q99PN3
Length = 545
Score = 132 (51.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACI--VKSMKSGSN--CPVCKVPYHRREI 63
L + E+ C ICL L V++ C HVFC +C ++ + SG+ CP+CK P+ + I
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTSDIRPI-SGNRPVCPLCKKPFKKENI 65
Query: 64 RAAPHMDNLVSVYKSMEVASG 84
R + +LV + ++V +G
Sbjct: 66 RPVWQLASLVENIERLKVDNG 86
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 207 WLRDEED--REKSSQHTETDAYITPPDVPSFSDLK-DSEDISSSE 248
W DEE+ E+ + E D + D + D + D ED S E
Sbjct: 385 WSEDEEEGEEEEEGEEEEEDEEVGYGD--GYEDWETDEEDESLGE 427
>UNIPROTKB|F1RHP9 [details] [associations]
symbol:TRIM68 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060765 "regulation of androgen receptor signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005794
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0060765 InterPro:IPR017907 GO:GO:0051865 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 KO:K12033 EMBL:CU633634
RefSeq:XP_003482598.1 Ensembl:ENSSSCT00000016119 GeneID:100738170
KEGG:ssc:100738170 OMA:GVCKEDV Uniprot:F1RHP9
Length = 485
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 3 DQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV-------KSMKSGSNCPVCK 55
D + +E + E+ CPIC++ L VS+ C H FC++C+ ++ G +CP+C+
Sbjct: 2 DPAALMEAVVEEVACPICMTFLKEPVSIDCGHSFCHSCLSGLWEVPGEAPNWGYSCPLCR 61
Query: 56 VPYHRREIRAAPHMDNLVSVYKSMEVASGINI 87
P R +R + N+ + + + G+ +
Sbjct: 62 APVQPRNLRPNWQLANVAEKIRRLGLHPGMGL 93
>WB|WBGene00007529 [details] [associations]
symbol:C11H1.3 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 GO:GO:0008340 GO:GO:0040010 GO:GO:0046872
GO:GO:0018996 GO:GO:0008270 GO:GO:0010171 GO:GO:0040011
GO:GO:0040035 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG332026
GeneTree:ENSGT00390000009925 EMBL:Z70205 PIR:T19204
RefSeq:NP_510385.1 ProteinModelPortal:Q17911 SMR:Q17911
PaxDb:Q17911 EnsemblMetazoa:C11H1.3 GeneID:181537
KEGG:cel:CELE_C11H1.3 UCSC:C11H1.3 CTD:181537 WormBase:C11H1.3
HOGENOM:HOG000018428 InParanoid:Q17911 OMA:GLECIIC NextBio:914352
Uniprot:Q17911
Length = 529
Score = 123 (48.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 2 GDQRSHLEKMGRE--LKCPICLSLLSSAVSLTCNHV-FCNACIVKSMKSGSNCPVCKVPY 58
G + +E M + L+C ICLS + V L C H+ C+ C +NCP+C+ P+
Sbjct: 252 GIENKSVETMDDDSGLECIICLSDIRDTVILPCRHLCVCSNCADSLRYKHNNCPICRSPF 311
Query: 59 HRREIRAAPHMDNLVSVYKSMEVASGIN 86
R IR H +Y+++ + G+N
Sbjct: 312 -RALIRLRAHRQTRNQIYETVSLVEGLN 338
Score = 50 (22.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 33/136 (24%), Positives = 60/136 (44%)
Query: 176 KNTTGELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSF 235
K++ G KS V+ + ++E ++ +E D ++ + + ++ DVP
Sbjct: 368 KSSNG--KSMHQVLTMEQLGDEEVKECIEMSYIANEHDTDEDDE--DEKKRVSEKDVP-I 422
Query: 236 SDLKDSEDISSSELSPTAEVHGKSDGLDFFESEI-FEWTQRACSPELLPSPAKTQVADAE 294
S + +SED SS S + H S D ESE E QR S +K ++E
Sbjct: 423 SQV-ESEDGSSGSSSQPLQKHHSSVS-DISESEEESEPPQREVSKPSEDCESKKS-EESE 479
Query: 295 ENGKGLEAALQGSNTV 310
++ + +AA ++V
Sbjct: 480 DDERKSQAAHSDDDSV 495
>RGD|1304579 [details] [associations]
symbol:Trim5 "tripartite motif-containing 5" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0002218 "activation of innate immune response"
evidence=ISO] [GO:0002221 "pattern recognition receptor signaling
pathway" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008329 "pattern recognition receptor activity" evidence=ISO]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0070206 "protein trimerization" evidence=IEA;ISO]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
RGD:1304579 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
EMBL:CH473956 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 eggNOG:NOG310455
OrthoDB:EOG4229JJ CTD:85363 KO:K10648 EMBL:AC113720 EMBL:BC078926
IPI:IPI00475551 RefSeq:NP_001014045.1 UniGene:Rn.12117 SMR:Q6AYT1
STRING:Q6AYT1 Ensembl:ENSRNOT00000023100 GeneID:308906
KEGG:rno:308906 UCSC:RGD:1304579 InParanoid:Q6AYT1 NextBio:659774
Genevestigator:Q6AYT1 Uniprot:Q6AYT1
Length = 511
Score = 134 (52.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 29/73 (39%), Positives = 39/73 (53%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS-N-----CPVCKVPYHRREIRAAP 67
E+ CPICL L+ VS C H FC ACI + +S N CPVC+V Y + +R
Sbjct: 12 EVTCPICLDLMVEPVSGDCGHSFCQACITLNYESSKCNQDEFICPVCRVSYLFKNLRPNR 71
Query: 68 HMDNLVSVYKSME 80
H+ N+V K +
Sbjct: 72 HVANIVQRLKEFK 84
Score = 38 (18.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 349 IENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSI 398
+EN + KG + +++K + + +S EESEN +Q+ +
Sbjct: 179 VENVQSEFKGMRDIMDSEEKKELQKLMQEKEDIMSSLEESENEYSQQSKL 228
>UNIPROTKB|F1MYX8 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9913 "Bos taurus" [GO:2000620 "positive regulation
of histone H4-K16 acetylation" evidence=IEA] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=IEA] [GO:0070512
"positive regulation of histone H4-K20 methylation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0044030 "regulation of DNA
methylation" evidence=IEA] [GO:0043009 "chordate embryonic
development" evidence=IEA] [GO:0035067 "negative regulation of
histone acetylation" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 IPI:IPI00687086 UniGene:Bt.14026
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
OMA:CMLKLLN GO:GO:0043009 GO:GO:0009048 GO:GO:0007098
EMBL:DAAA02049201 Ensembl:ENSBTAT00000011616 ArrayExpress:F1MYX8
Uniprot:F1MYX8
Length = 1849
Score = 143 (55.4 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK--SMKSG-SNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K G S CP+CK +R ++
Sbjct: 15 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 65 AAPHMDNLVS----VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVT----GGCQDKV 116
+ LV + + E+ +G+ + + S + + E+V+ G +++
Sbjct: 75 ESTRFSQLVEELLKIIHAFELDTGLQFANSYNFSRKEDNSPEHLKEEVSIIQSMGYRNRA 134
Query: 117 EH--QGTSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQ 154
+ Q + + TS TVE S + S TK++ Q
Sbjct: 135 KRLWQSEPENPTLQETS-LTVELSNLGIVR-SLRTKQQTQ 172
Score = 47 (21.6 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 331 NEGRCKALCPRNTNPNNMIENGKLN---KKGRK----ANSTAQKKYAKRDTNKGSTTPAT 383
N+ +CK P + I+ L K K + T QK + T+ G
Sbjct: 498 NKLKCKRRGTSGLQPEDFIKKVDLTIVPKTPEKMTEGTDQTEQKCHGMNITSDGH----- 552
Query: 384 SNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPI 419
N+ ++VQK+ + + A+ +K S R AEPI
Sbjct: 553 ENKTKRDYVQKEQNANPAESLEKESVFR--TEAEPI 586
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 31/136 (22%), Positives = 54/136 (39%)
Query: 278 SPELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATC------VIFEQGNGNEN 331
S E+L K V+D EE GLE VD G A + E G G +
Sbjct: 1325 SEEVLSD--KELVSDDEERETGLEEDSCQEEQSVDSDLGEAVSDHVSETSLSEDGVGLSS 1382
Query: 332 EGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENF 391
+ R+T +N++ KL ++ + + ++ ++ + S T + E
Sbjct: 1383 QSDILTTQQRDTMQDNLL---KLQQEMAELEAVLERHGSQPSHSSASLTADSRGPEHLLN 1439
Query: 392 VQKQTSISNAKFSQKS 407
+++ TS S+KS
Sbjct: 1440 LEQDTSERAILTSEKS 1455
Score = 44 (20.5 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 549 DKELQWNKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSS 597
+K L ++++ S IS++ + ES +E S++ NE S GSS
Sbjct: 1004 EKTLGSESIIQSAVSTISQNN-IQESTFKEVSSNSVNEVGSSTNEVGSS 1051
Score = 44 (20.5 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 367 KKYAKRDTNKGSTTPATSNEE---SENFVQK------QTSISNAKFSQKSSNRRGTCAAE 417
K K+ ++ P TS E+ SE+ +Q Q +I + F + SSN +
Sbjct: 985 KTICKKSPSEKFEEPVTSPEKTLGSESIIQSAVSTISQNNIQESTFKEVSSNSVNEVGSS 1044
Query: 418 PIPDNVLAASVRTEIVDQHGKNIGSD 443
N + +SV V G+NI ++
Sbjct: 1045 T---NEVGSSVNE--VGSSGENIQAE 1065
Score = 43 (20.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 9/52 (17%), Positives = 25/52 (48%)
Query: 208 LRDEEDREKSSQHTETDAYITPPDVPSFSDLKDSEDISSSELSPTAEVHGKS 259
+ D ++ S+H TP ++ + ++K++ + S++ + V +S
Sbjct: 1124 ISDNLEQPTGSRHASQVCSETPDNLLNDDEIKENSHFAESDIKERSAVFSES 1175
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 15/66 (22%), Positives = 26/66 (39%)
Query: 724 ILQCRWDTDNFVMLCPLHTSSNLPNENPGSQESRKKCISKKLLTQHNKVAFKSDISTNSW 783
+L DT +L + ++NP S + K +S T NK S + +
Sbjct: 1437 LLNLEQDTSERAILTSEKSRDYSRSQNPESLSADKFPVSLDSSTNKNKEPGMERSSASKF 1496
Query: 784 QSWENK 789
Q +N+
Sbjct: 1497 QLSDNR 1502
>UNIPROTKB|Q9BZY9 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005739 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859 EMBL:CR753815
EMBL:AF230386 EMBL:AF230387 EMBL:BT006675 EMBL:AK222729
EMBL:BX322644 EMBL:BC016866 EMBL:BC017017 EMBL:Y07828
IPI:IPI00292397 IPI:IPI00292398 RefSeq:NP_008959.3
UniGene:Hs.493275 PDB:2YSJ PDB:2YSL PDBsum:2YSJ PDBsum:2YSL
ProteinModelPortal:Q9BZY9 SMR:Q9BZY9 IntAct:Q9BZY9 STRING:Q9BZY9
DMDM:68068082 PRIDE:Q9BZY9 DNASU:11074 Ensembl:ENST00000357569
Ensembl:ENST00000376734 Ensembl:ENST00000433864
Ensembl:ENST00000445679 Ensembl:ENST00000449412
Ensembl:ENST00000453266 Ensembl:ENST00000540829
Ensembl:ENST00000547935 Ensembl:ENST00000550451
Ensembl:ENST00000551027 Ensembl:ENST00000552274
Ensembl:ENST00000552311 GeneID:11074 KEGG:hsa:11074 UCSC:uc003npg.1
CTD:11074 GeneCards:GC06M030073 H-InvDB:HIX0005686
H-InvDB:HIX0166392 HGNC:HGNC:16289 HPA:HPA046400 MIM:609316
neXtProt:NX_Q9BZY9 PharmGKB:PA38117 eggNOG:NOG310139
HOVERGEN:HBG083771 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EvolutionaryTrace:Q9BZY9 GenomeRNAi:11074 NextBio:42098
ArrayExpress:Q9BZY9 Bgee:Q9BZY9 Genevestigator:Q9BZY9
GermOnline:ENSG00000204616 Uniprot:Q9BZY9
Length = 425
Score = 124 (48.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
+ K+ E+ CPICL +L V++ C H FC CI + ++ CP+CK + IR
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 65 AAPHMDNLVSVYKSMEVA 82
+ NLV ++++ +
Sbjct: 67 FNSLLRNLVEKIQALQAS 84
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEES 388
++ N N+M G L K K N T++ + G TT N S
Sbjct: 310 KSMNKNDMKSWGLLQKNNHKMNKTSEPGSSSAG---GRTTSGPPNHHS 354
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 30/165 (18%), Positives = 65/165 (39%)
Query: 221 TETDAYITPPDVPSFSDLKDSED-ISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSP 279
TE + P +DLK D + + + P ++ + + SE F++ +P
Sbjct: 211 TEAGKHYVASTEPQLNDLKKLVDSLKTKQNMPPRQLL-EDIKVVLCRSEEFQFL----NP 265
Query: 280 ELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALC 339
+P + ++++A+ + +L+ + F+ + N+N+ + L
Sbjct: 266 TPVPLELEKKLSEAKSRHDSITGSLKKFKDQLQADRKKDENRFFK--SMNKNDMKSWGLL 323
Query: 340 PRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATS 384
+N N K+NK +S+A + N S+ P+ S
Sbjct: 324 QKN--------NHKMNKTSEPGSSSAGGRTTSGPPNHHSSAPSHS 360
>UNIPROTKB|G8JLN1 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 SMR:G8JLN1
Ensembl:ENST00000455349 Ensembl:ENST00000552059 Uniprot:G8JLN1
Length = 425
Score = 124 (48.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---CPVCKVPYHRREIR 64
+ K+ E+ CPICL +L V++ C H FC CI + ++ CP+CK + IR
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 65 AAPHMDNLVSVYKSMEVA 82
+ NLV ++++ +
Sbjct: 67 FNSLLRNLVEKIQALQAS 84
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 341 RNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEES 388
++ N N+M G L K K N T++ + G TT N S
Sbjct: 310 KSMNKNDMKSWGLLQKNNHKMNKTSEPGSSSAG---GRTTSGPPNHHS 354
Score = 41 (19.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 30/165 (18%), Positives = 65/165 (39%)
Query: 221 TETDAYITPPDVPSFSDLKDSED-ISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSP 279
TE + P +DLK D + + + P ++ + + SE F++ +P
Sbjct: 211 TEAGKHYVASTEPQLNDLKKLIDSLKTKQNMPPRQLL-EDIKVVLCRSEEFQFL----NP 265
Query: 280 ELLPSPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALC 339
+P + ++++A+ + +L+ + F+ + N+N+ + L
Sbjct: 266 TPVPLELEKKLSEAKSRHDSITGSLKKFKDQLQADRKKDENRFFK--SMNKNDMKSWGLL 323
Query: 340 PRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATS 384
+N N K+NK +S+A + N S+ P+ S
Sbjct: 324 QKN--------NHKMNKTSEPGSSSAGGRTTSGPPNHHSSAPSHS 360
>UNIPROTKB|Q6P256 [details] [associations]
symbol:chfr "E3 ubiquitin-protein ligase CHFR" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007093
"mitotic cell cycle checkpoint" evidence=ISS] [GO:0016605 "PML
body" evidence=ISS] [GO:0019941 "modification-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 Pfam:PF13639
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0051301 GO:GO:0007067
GO:GO:0000166 GO:GO:0046872 GO:GO:0016605 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209 GO:GO:0007093
GO:GO:0019941 InterPro:IPR017907 CTD:55743 eggNOG:NOG253207
GeneTree:ENSGT00400000022306 HOGENOM:HOG000290186 KO:K10644
OrthoDB:EOG43FGWJ HSSP:Q96EP1 EMBL:BC064721 RefSeq:NP_989378.1
UniGene:Str.20502 ProteinModelPortal:Q6P256 SMR:Q6P256
STRING:Q6P256 Ensembl:ENSXETT00000052239 GeneID:395009
KEGG:xtr:395009 Xenbase:XB-GENE-998659 InParanoid:Q6P256
OMA:SASEPAC Bgee:Q6P256 Uniprot:Q6P256
Length = 626
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 49/179 (27%), Positives = 77/179 (43%)
Query: 9 EKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAP 67
+KM L C IC LL VSL C H FC AC M+ S CP C+ P R I
Sbjct: 259 DKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER--ICKNH 316
Query: 68 HMDNLVSVY--KSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGK 125
++NLV Y + E + D + K + D++ +V D+ +G+S+
Sbjct: 317 ILNNLVEAYLIQHPEKCRSEEDRCSMD-ARNKITQDML-QPKVRRSFSDE---EGSSEDL 371
Query: 126 RFRR---TSKATVEPSGTVCTKPSCP--TKKRVQVAQYPLPETPTQPAKLEGGTVKNTT 179
+ + + TVC + CP + +Q YP P + T+ ++ +G +T
Sbjct: 372 LELSDVDSESSDISQPYTVCRQ--CPGYVRHNIQPPPYP-PPSDTEASRTQGDAPSTST 427
>UNIPROTKB|Q32LN5 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016055
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 EMBL:BC109497 IPI:IPI00709714
RefSeq:NP_001033263.1 UniGene:Bt.45000 ProteinModelPortal:Q32LN5
PRIDE:Q32LN5 Ensembl:ENSBTAT00000026851 GeneID:538445
KEGG:bta:538445 CTD:51444 eggNOG:NOG44750 InParanoid:Q32LN5
KO:K10668 OMA:EANFTRQ OrthoDB:EOG4J9N0K NextBio:20877365
Uniprot:Q32LN5
Length = 245
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 17 CPICLSLLSSAV-SLTCNHVFCNACIVKSMK-SGSNCPVCKVPYHRREIRAAP 67
CP+C +L + V + C HVFC C + +M+ SG +CP+C+ RRE RA P
Sbjct: 18 CPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGNVTRRE-RACP 69
>UNIPROTKB|F1SAL6 [details] [associations]
symbol:RNF138 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063064 KO:K10668 OMA:EANFTRQ EMBL:CU467523
EMBL:CU019565 RefSeq:XP_003127930.1 UniGene:Ssc.63848
Ensembl:ENSSSCT00000004130 GeneID:100515956 KEGG:ssc:100515956
Uniprot:F1SAL6
Length = 245
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 17 CPICLSLLSSAV-SLTCNHVFCNACIVKSMK-SGSNCPVCKVPYHRREIRAAP 67
CP+C +L + V + C HVFC C + +M+ SG +CP+C+ RRE RA P
Sbjct: 18 CPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGNVTRRE-RACP 69
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 102 (41.0 bits), Expect = 0.00022, P = 0.00022
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAPH---MD 70
EL+C IC AV+L C H FC+ CI + K CP+C R+EI++ +D
Sbjct: 8 ELQCTICSEHFIEAVTLNCAHSFCSYCIDEWTKRKVECPIC-----RQEIKSKTRSLVLD 62
Query: 71 NLVS-VYKSMEV 81
N + + ++++V
Sbjct: 63 NCIDRMVENLDV 74
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 102 (41.0 bits), Expect = 0.00022, P = 0.00022
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCK 55
LE + E C +CL L V + C H FC ACI + ++ CPVC+
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCR 70
>UNIPROTKB|K7GNS2 [details] [associations]
symbol:K7GNS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000034844 Uniprot:K7GNS2
Length = 250
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 4 QRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHR 60
Q + L ++ E CPICL L V+ C H FC++CI++ ++ CPVC
Sbjct: 3 QAASLAQLQAEASCPICLDYLQDPVTTDCGHNFCHSCILQRWEDLQGDFPCPVCLQHCPD 62
Query: 61 REIRAAPHMDNLVSVYKSM 79
R +R + +V V K +
Sbjct: 63 RSLRRNTQLCRMVDVVKQL 81
>UNIPROTKB|F1S6J8 [details] [associations]
symbol:TRIM58 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646 CTD:25893
KO:K12027 OMA:FQVDIKL EMBL:AEMK01179769 EMBL:CU856331 EMBL:FP312918
RefSeq:XP_003123626.2 Ensembl:ENSSSCT00000015246 GeneID:100519825
KEGG:ssc:100519825 Uniprot:F1S6J8
Length = 480
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK------SMKSGSN-CPVCKVPYHRR 61
E++ E +CP+CL L + VS+ C H FC CI + S +SG CP C+ P+ +
Sbjct: 8 ERLCEEARCPVCLDFLQNPVSVDCGHSFCLKCISEFCEKSDSAQSGLYACPQCRGPFRQE 67
Query: 62 EIRAAPHMDNLVSVYKSMEVASG 84
R + +LV + + + +G
Sbjct: 68 NFRPNRQLASLVESVRQLGLGAG 90
>UNIPROTKB|F1N2E6 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00732393
UniGene:Bt.43398 ProteinModelPortal:F1N2E6
Ensembl:ENSBTAT00000007366 ArrayExpress:F1N2E6 Uniprot:F1N2E6
Length = 488
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVK-----SMKSGSNCPVCKVPYHRREIRAAPH 68
E+ CPIC LL+ +SL C H FC CI S+ S+CPVC Y + H
Sbjct: 12 EVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGGDSSCPVCGTQYSLGNLWPNLH 71
Query: 69 MDNLVSVYKSMEVA 82
+ N+V + ++++
Sbjct: 72 LANIVERLRKVKLS 85
>UNIPROTKB|A2AAZ6 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HOVERGEN:HBG001357
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00643713 SMR:A2AAZ6 Ensembl:ENST00000428728
Ensembl:ENST00000431871 Ensembl:ENST00000440130
Ensembl:ENST00000442914 Ensembl:ENST00000447077
Ensembl:ENST00000449396 Ensembl:ENST00000450421 Uniprot:A2AAZ6
Length = 261
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIR 64
LE + E C +CL L V + C H FC ACI + ++ CPVC+ R +R
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 65 AAPHMDNLVSVYKSME 80
+ ++V + K ++
Sbjct: 80 PNRQLGSMVEIAKQLQ 95
>UNIPROTKB|K7GRY7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104499
EMBL:CT737425 Ensembl:ENSSSCT00000035216 Uniprot:K7GRY7
Length = 544
Score = 118 (46.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 10 KMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKS---MKSGSNCPVCKVPYHRREIRAA 66
K+ E+ CPIC+ +L ++ C H FC CI++S + S CP+C R IR
Sbjct: 9 KLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRPN 68
Query: 67 PHMDNLVSVYKSME 80
+ NLV ++M+
Sbjct: 69 WLLVNLVEKIQAMD 82
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 570 LVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGAL 613
++G + GC + E + PEG G +GV +L T+RG L
Sbjct: 417 VLGLPGLSSGCQTWEAELEGPEG--GGCLVGVASEL-VTRRGPL 457
>MGI|MGI:2684881 [details] [associations]
symbol:Trim40 "tripartite motif-containing 40" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 MGI:MGI:2684881 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:Q9CQJ4
GeneTree:ENSGT00700000104499 CTD:135644 eggNOG:NOG263238
HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016 OMA:HYKERLN
OrthoDB:EOG4W9J4P EMBL:AK136498 EMBL:BC147336 EMBL:BC147337
IPI:IPI00355276 RefSeq:NP_001028407.1 UniGene:Mm.32606
ProteinModelPortal:Q3UWA4 SMR:Q3UWA4 PhosphoSite:Q3UWA4
PRIDE:Q3UWA4 Ensembl:ENSMUST00000087158 GeneID:195359
KEGG:mmu:195359 UCSC:uc008clk.2 InParanoid:B2RVT3 NextBio:371759
Bgee:Q3UWA4 CleanEx:MM_TRIM40 Genevestigator:Q3UWA4 Uniprot:Q3UWA4
Length = 246
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS-----NCPVCKVP 57
L+K +++ CPICL L AVS C H+FC C+ + M S +CPVC+ P
Sbjct: 4 LDKDNQDI-CPICLDPLKEAVSTDCRHLFCRMCLTQHMDKASVSGILSCPVCRKP 57
>UNIPROTKB|F1MAV4 [details] [associations]
symbol:LOC100848694 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042325 "regulation of
phosphorylation" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184 SMART:SM00248
InterPro:IPR001357 Prosite:PS00518 GO:GO:0005737 GO:GO:0043066
GO:GO:0042325 GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GeneTree:ENSGT00550000074487 InterPro:IPR017907 GO:GO:0070531
GO:GO:0031436 OMA:KKNSIKM GO:GO:0046826 GO:GO:0085020
EMBL:DAAA02005860 IPI:IPI00842170 Ensembl:ENSBTAT00000047858
Uniprot:F1MAV4
Length = 772
Score = 137 (53.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 70/305 (22%), Positives = 133/305 (43%)
Query: 5 RSHLEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREI 63
R+ L+++ + L+C C ++L V L C H+FC+ C+ + GS CPVC P +++
Sbjct: 33 RAALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCI--GSECPVCYTPAWIQDV 90
Query: 64 RAAPHMDNLVSVYKSME-VASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTS 122
+ +D+++ + ++ + ++ ++++S KS L Q ++ ++ +
Sbjct: 91 KINRQLDSMIQLCSKLQNLLHDTDLSDLKEKTSRKS---LFNDAQSK---KNSIKMWFSP 144
Query: 123 KGKRFRRT-SKATVEPSGTVCTKPSCPTKKRVQ-VAQYPLPETPTQPAKLEGGTVK-NTT 179
+ K+ R T SK +V+ T+PS + Q + Y +P+ P ++ G K +T
Sbjct: 145 RSKKVRYTVSKLSVQ------TQPSVKNDENAQQTSMYEFV-SPSPPVEVSEGPKKPSTR 197
Query: 180 GELKSSSVVIRE-NPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSDL 238
K + E N N E + E +EK + I + DL
Sbjct: 198 SRKKQKKKTLAEVNRKWNLEAEKEDGDLDCKGES-KEKLVSFCSQPSVIANLQINGEIDL 256
Query: 239 KDSEDISSSE-----LSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADA 293
S ++ SE P AE H +S ++ ++E+ ++ S LPS K +
Sbjct: 257 LASGSVTESECLDEVFLPLAE-HIESPEIES-KNEVVT-PEKTVSANYLPS--KKSLPSG 311
Query: 294 EENGK 298
NGK
Sbjct: 312 R-NGK 315
Score = 38 (18.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 765 LLTQHNKVAFKSDISTNSWQSWENKLVLCCSALTVGEQ 802
LL + + + S S N+ Q + LVL S L+ +Q
Sbjct: 540 LLPEKKESSSTSHCSVNTGQRRDGPLVLIGSGLSSEQQ 577
>UNIPROTKB|B6ICU7 [details] [associations]
symbol:TRIM31 "Tripartite motif-containing protein 31"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 CTD:11074 eggNOG:NOG310139 HOVERGEN:HBG083771
KO:K12011 OrthoDB:EOG4K0QNJ GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AP009553 RefSeq:XP_001928015.3
Ensembl:ENSSSCT00000001348 GeneID:100154496 KEGG:ssc:100154496
OMA:HDSITET Uniprot:B6ICU7
Length = 576
Score = 118 (46.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 10 KMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKS---MKSGSNCPVCKVPYHRREIRAA 66
K+ E+ CPIC+ +L ++ C H FC CI++S + S CP+C R IR
Sbjct: 9 KLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRPN 68
Query: 67 PHMDNLVSVYKSME 80
+ NLV ++M+
Sbjct: 69 WLLVNLVEKIQAMD 82
Score = 54 (24.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 570 LVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGAL 613
++G + GC + E + PEG G +GV +L T+RG L
Sbjct: 449 VLGLPGLSSGCQTWEAELEGPEG--GGCLVGVASEL-VTRRGPL 489
>UNIPROTKB|F1RYH5 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:11074 KO:K12011 GeneTree:ENSGT00700000104499 EMBL:CU607067
RefSeq:NP_001193331.1 UniGene:Ssc.26008 UniGene:Ssc.83065
Ensembl:ENSSSCT00000001357 GeneID:100154124 KEGG:ssc:100154124
OMA:WEAELQG Uniprot:F1RYH5
Length = 576
Score = 118 (46.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 10 KMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKS---MKSGSNCPVCKVPYHRREIRAA 66
K+ E+ CPIC+ +L ++ C H FC CI++S + S CP+C R IR
Sbjct: 9 KLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRPN 68
Query: 67 PHMDNLVSVYKSME 80
+ NLV ++M+
Sbjct: 69 WLLVNLVEKIQAMD 82
Score = 54 (24.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 570 LVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEKLHKTQRGAL 613
++G + GC + E + PEG G +GV +L T+RG L
Sbjct: 449 VLGLPGLSSGCQTWEAELEGPEG--GGCLVGVASEL-VTRRGPL 489
>UNIPROTKB|H0YAI5 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL110117 EMBL:AL645924
EMBL:BX322586 EMBL:CR450722 EMBL:CR545473 HGNC:HGNC:10067
ChiTaRS:RNF4 Ensembl:ENST00000508235 Uniprot:H0YAI5
Length = 106
Score = 100 (40.3 bits), Expect = 0.00036, P = 0.00036
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 15 LKCPICLSLLSSAV-------SLTCNHVFCNACIVKSMKSGSNCPVCKVPY-HRR 61
+ CPIC+ S V S C HVFC+ C+ S+K+ + CP C+ H+R
Sbjct: 46 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 100
>UNIPROTKB|Q5T8Z5 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643353 SMR:Q5T8Z5
Ensembl:ENST00000456675 Uniprot:Q5T8Z5
Length = 92
Score = 100 (40.3 bits), Expect = 0.00036, P = 0.00036
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 5 RSHLEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHR 60
R + ++ L C +C A ++ C H FC CIV+ +++ CP+C V H+
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62
>UNIPROTKB|Q5T8Z6 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 GO:GO:0016574
GO:GO:0033092 GO:GO:0021903 GO:GO:0048103 EMBL:AL158211
UniGene:Hs.380403 UniGene:Hs.731287 HGNC:HGNC:1066
HOGENOM:HOG000231946 IPI:IPI00640733 SMR:Q5T8Z6 MINT:MINT-1403210
Ensembl:ENST00000416820 HOVERGEN:HBG071649 Uniprot:Q5T8Z6
Length = 105
Score = 100 (40.3 bits), Expect = 0.00036, P = 0.00036
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 5 RSHLEKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHR 60
R + ++ L C +C A ++ C H FC CIV+ +++ CP+C V H+
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62
>UNIPROTKB|I3LP53 [details] [associations]
symbol:LOC100621782 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP067415 RefSeq:XP_003356978.1
Ensembl:ENSSSCT00000028301 GeneID:100621782 KEGG:ssc:100621782
OMA:ESIHIRY Uniprot:I3LP53
Length = 460
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00036
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 4 QRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHR 60
Q + L ++ E CPICL L V+ C H FC++CI++ ++ CPVC
Sbjct: 3 QAASLAQLQAETSCPICLDYLQDPVTTDCGHNFCHSCILQRWEDLQGDFPCPVCLQHCPD 62
Query: 61 REIRAAPHMDNLVSVYKSMEVASG 84
R +R + ++V V K + G
Sbjct: 63 RSLRRNTQLCHMVDVVKQLPNTEG 86
>UNIPROTKB|Q6PGR9 [details] [associations]
symbol:trim72 "Tripartite motif-containing protein 72"
species:8355 "Xenopus laevis" [GO:0001778 "plasma membrane repair"
evidence=ISS] [GO:0001786 "phosphatidylserine binding"
evidence=ISS] [GO:0003012 "muscle system process" evidence=ISS]
[GO:0007517 "muscle organ development" evidence=ISS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=ISS] [GO:0042383
"sarcolemma" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
GO:GO:0042383 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0007517
GO:GO:0030659 GO:GO:0006887 GO:GO:0001786 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GO:GO:0001778 HSSP:P29590
GO:GO:0003012 CTD:493829 KO:K12036 EMBL:BC056854
RefSeq:NP_001079922.1 UniGene:Xl.24124 ProteinModelPortal:Q6PGR9
GeneID:379612 KEGG:xla:379612 Xenbase:XB-GENE-5896500
Uniprot:Q6PGR9
Length = 477
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV---KSM-KSGSN-CPVCKVPYHRRE 62
++ M ++L C +CL L + V+ C H FC C+ K+ ++GS CP C+ P
Sbjct: 7 MQGMQKDLTCQLCLELFRAPVTPECGHTFCQGCLTGVPKNQDQNGSTPCPTCQSPSRPET 66
Query: 63 IRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQG-- 120
++ +++LV +K +V G + D S D E + G C +H+G
Sbjct: 67 LQINRQLEHLVQSFK--QVPQG-HCLEHMDPLSVYCEQDK---ELICGVCASLGKHKGHN 120
Query: 121 -TSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTT 179
+ + F + K + + + +K V V + E ++ +G VK+
Sbjct: 121 IITASEAFAKL-KRQLPQQQVILQEARLKKEKTVAVLDRQVAEVQDTVSRFKGN-VKHQL 178
Query: 180 GELKS 184
++S
Sbjct: 179 NAMRS 183
>ZFIN|ZDB-GENE-060616-101 [details] [associations]
symbol:trim109 "tripartite motif containing 109"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-060616-101 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 eggNOG:NOG274496 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00700000104222 EMBL:BX005429 EMBL:BC117661
IPI:IPI00770923 RefSeq:NP_001038768.1 UniGene:Dr.108525
Ensembl:ENSDART00000090234 GeneID:723998 KEGG:dre:723998 CTD:723998
HOGENOM:HOG000123639 HOVERGEN:HBG096489 InParanoid:Q1ECU9
OMA:EMHQFLR OrthoDB:EOG4XH025 NextBio:20902619 Uniprot:Q1ECU9
Length = 497
Score = 123 (48.4 bits), Expect = 0.00041, P = 0.00041
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 10 KMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN--CPVCKVPYHRREIRAAP 67
++ ++++C +CL + VSL C+H FC CI +S CP C+ PY ++R+
Sbjct: 4 RLSKQIQCSVCLGDFTDPVSLLCDHTFCRQCISNHSQSSRLRLCPECRRPYTMWDLRSNR 63
Query: 68 HMDNLVSVYK 77
+ N+VS +
Sbjct: 64 VLRNMVSAVR 73
>UNIPROTKB|Q5FWP4 [details] [associations]
symbol:chfr "E3 ubiquitin-protein ligase CHFR" species:8355
"Xenopus laevis" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=ISS]
[GO:0016605 "PML body" evidence=IDA] [GO:0019941
"modification-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0051301 GO:GO:0007067 GO:GO:0000166 GO:GO:0046872
GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209
GO:GO:0007093 GO:GO:0019941 InterPro:IPR017907 CTD:55743 KO:K10644
HSSP:Q96EP1 EMBL:BC089260 RefSeq:NP_001089240.1 UniGene:Xl.25667
ProteinModelPortal:Q5FWP4 SMR:Q5FWP4 IntAct:Q5FWP4 GeneID:734287
KEGG:xla:734287 Xenbase:XB-GENE-6251657 Uniprot:Q5FWP4
Length = 625
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 49/179 (27%), Positives = 77/179 (43%)
Query: 9 EKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAP 67
+KM L C IC LL VSL C H FC AC M+ S CP C+ P R I
Sbjct: 258 DKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER--ICKNH 315
Query: 68 HMDNLVSVY--KSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGK 125
++NLV Y + E + D + K + D++ +V D+ +G+S+
Sbjct: 316 ILNNLVEAYLIQHPEKCRSEEDRCSMD-ARNKITQDML-QPKVRRSFSDE---EGSSEDL 370
Query: 126 RFRR---TSKATVEPSGTVCTKPSCP--TKKRVQVAQYPLPETPTQPAKLEGGTVKNTT 179
+ + + TVC + CP + +Q YP P + T+ ++ +G +T
Sbjct: 371 LELSDVDSESSDISQPYTVCRQ--CPGFVRHSMQPPPYP-PPSDTETSRTQGDAPSTST 426
>UNIPROTKB|A6NCK2 [details] [associations]
symbol:TRIM43B "Tripartite motif-containing protein 43B"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407 eggNOG:NOG278898
KO:K12019 EMBL:AC009237 IPI:IPI00335269 RefSeq:NP_001157936.1
UniGene:Hs.723811 ProteinModelPortal:A6NCK2 SMR:A6NCK2
PhosphoSite:A6NCK2 PRIDE:A6NCK2 GeneID:653192 KEGG:hsa:653192
UCSC:uc021vle.1 CTD:653192 GeneCards:GC02M096143 HGNC:HGNC:37146
HPA:HPA042223 neXtProt:NX_A6NCK2 PharmGKB:PA165697592
InParanoid:A6NCK2 GenomeRNAi:653192 NextBio:122884
Genevestigator:A6NCK2 Uniprot:A6NCK2
Length = 446
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 13 RELKCPICLSLLSSAVSLTCNHVFCNACIVKSMK---SGSNCPVCKVPYHRREIRAAPHM 69
+EL C ICL+ L V++ C H FC C+ S + S +NCP C+ P + + + +
Sbjct: 11 KELTCVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPANCPACREPSPKMDFKTNILL 70
Query: 70 DNLVSV 75
NLV++
Sbjct: 71 KNLVTI 76
>ZFIN|ZDB-GENE-030131-3522 [details] [associations]
symbol:chfr "checkpoint with forkhead and ring
finger domains, E3 ubiquitin protein ligase" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0007093 "mitotic cell cycle
checkpoint" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0016605 "PML body" evidence=ISS] [GO:0019941
"modification-dependent protein catabolic process" evidence=ISS]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-3522 GO:GO:0051301 GO:GO:0007067 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0007093 GO:GO:0019941 InterPro:IPR017907
EMBL:CT573109 EMBL:BC153311 IPI:IPI00854275 IPI:IPI00944855
RefSeq:NP_001093485.1 UniGene:Dr.148986 ProteinModelPortal:A5WW08
SMR:A5WW08 STRING:A5WW08 Ensembl:ENSDART00000110783
Ensembl:ENSDART00000115227 GeneID:564271 KEGG:dre:564271 CTD:55743
eggNOG:NOG253207 GeneTree:ENSGT00400000022306 HOGENOM:HOG000290186
KO:K10644 OMA:LYWGCAR OrthoDB:EOG43FGWJ NextBio:20885304
Bgee:A5WW08 Uniprot:A5WW08
Length = 637
Score = 124 (48.7 bits), Expect = 0.00046, P = 0.00046
Identities = 28/69 (40%), Positives = 35/69 (50%)
Query: 9 EKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAP 67
+KM L C IC LL +S+ C H FC AC M+ S CP C+ P R IR
Sbjct: 269 DKMEESLTCIICQDLLYDCISVQPCMHTFCAACYSGWMERSSFCPTCRCPVER--IRKNH 326
Query: 68 HMDNLVSVY 76
++NLV Y
Sbjct: 327 ILNNLVEAY 335
>UNIPROTKB|F8WFA6 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC068312 EMBL:AC008151
EMBL:AC034186 HGNC:HGNC:18278 IPI:IPI00925824
ProteinModelPortal:F8WFA6 SMR:F8WFA6 Ensembl:ENST00000421052
ArrayExpress:F8WFA6 Bgee:F8WFA6 Uniprot:F8WFA6
Length = 126
Score = 99 (39.9 bits), Expect = 0.00046, P = 0.00046
Identities = 32/104 (30%), Positives = 47/104 (45%)
Query: 15 LKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAPHMDNLV 73
L+C IC + A+ + C+H +C+ CI K + + CP C V +++ +D L
Sbjct: 23 LRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDELE 82
Query: 74 S-VYKSMEVASGINIFVTQDESSTKS--SGDLI----CGEQVTG 110
S V S I+ F ES +S S L GEQV G
Sbjct: 83 SSAAVCFRVTSQISCFFLFKESCCQSIYSCSLQTVFKAGEQVNG 126
>RGD|1310105 [details] [associations]
symbol:Trim27 "tripartite motif-containing 27" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0002820 "negative regulation of adaptive immune response"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA;ISO] [GO:0045814 "negative regulation of gene
expression, epigenetic" evidence=IEA;ISO] [GO:0070206 "protein
trimerization" evidence=IEA;ISO] [GO:0072643 "interferon-gamma
secretion" evidence=IEA;ISO] [GO:0090281 "negative regulation of
calcium ion import" evidence=IEA;ISO] [GO:1900041 "negative
regulation of interleukin-2 secretion" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
RGD:1310105 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CH474072 GeneTree:ENSGT00700000104307
IPI:IPI00562695 UniGene:Rn.8393 Ensembl:ENSRNOT00000041671
UCSC:RGD:1310105 NextBio:632221 Uniprot:D4AAJ8
Length = 246
Score = 117 (46.2 bits), Expect = 0.00047, P = 0.00047
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIRA 65
E + +E CP+CL + L C H C AC+ + + ++ +CP C+ + +R +R
Sbjct: 8 ESLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRHMRP 67
Query: 66 APHMDNLVSVYKSM 79
H+ N+ + K +
Sbjct: 68 NRHLANVTQLVKQL 81
>ZFIN|ZDB-GENE-070705-379 [details] [associations]
symbol:btr27 "bloodthirsty-related gene family,
member 27" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-379 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG252602 OrthoDB:EOG4BVRTF HOVERGEN:HBG106862 EMBL:CR853286
IPI:IPI00962937 Ensembl:ENSDART00000132370
GeneTree:ENSGT00660000095328 Uniprot:A5WUZ3
Length = 549
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 33/143 (23%), Positives = 55/143 (38%)
Query: 11 MGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS--NCPVCKVPY-HRREIRAAP 67
+ EL+C ICL + + VS C H FC +C+ K + +CP CK + HR +++
Sbjct: 33 LSEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETFRHRPDLKINT 92
Query: 68 HMDNLVSVYKSMEVASGINIF--VTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGK 125
+ + YK + + V +D L+C CQ +E G
Sbjct: 93 TLREISEHYKEKKPEEKAEVVCDVCEDRKLKALKSCLVCQSSY---CQTHLERHLRVAGL 149
Query: 126 RFRRTSKATVEPSGTVCTKPSCP 148
+ + +C K P
Sbjct: 150 KKHKLMDPVRNLEDYICQKHDRP 172
>UNIPROTKB|B0V297 [details] [associations]
symbol:TRIM27 "Zinc finger protein RFP" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HOVERGEN:HBG001357
UniGene:Hs.440382 HGNC:HGNC:9975 ChiTaRS:TRIM27 EMBL:CR936876
EMBL:CR936883 EMBL:CR936965 IPI:IPI00893697 SMR:B0V297
Ensembl:ENST00000430891 Ensembl:ENST00000436621
Ensembl:ENST00000437415 Ensembl:ENST00000455861 Uniprot:B0V297
Length = 249
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIRA 65
E + +E CP+CL + + L C H C AC+ + + ++ +CP C+ + +R +R
Sbjct: 8 ECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRHMRP 67
Query: 66 APHMDNLVSVYKSM 79
H+ N+ + K +
Sbjct: 68 NRHLANVTQLVKQL 81
>TAIR|locus:2162504 [details] [associations]
symbol:RAD5 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP;IDA] [GO:0045003 "double-strand break
repair via synthesis-dependent strand annealing" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0009294 "DNA mediated transformation" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS00690 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 EMBL:AB006699 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0009294 GO:GO:0045003 KO:K15505 EMBL:AK228695 IPI:IPI00523984
RefSeq:NP_197667.1 UniGene:At.31042 ProteinModelPortal:Q9FNI6
SMR:Q9FNI6 STRING:Q9FNI6 PaxDb:Q9FNI6 PRIDE:Q9FNI6
EnsemblPlants:AT5G22750.1 GeneID:832338 KEGG:ath:AT5G22750
GeneFarm:4640 TAIR:At5g22750 HOGENOM:HOG000029930 InParanoid:Q9FNI6
OMA:KPIMLRR PhylomeDB:Q9FNI6 ProtClustDB:CLSN2686824
Genevestigator:Q9FNI6 GermOnline:AT5G22750 Uniprot:Q9FNI6
Length = 1029
Score = 126 (49.4 bits), Expect = 0.00051, P = 0.00051
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 10 KMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN--CPVCKVPYHRREIRAAP 67
+ G + +CPICL L AV C H C C++ S ++ ++ CPVC+ ++E+ AP
Sbjct: 787 RKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTVSKQELITAP 846
Query: 68 HMDNL-VSVYKSMEVASGINIFVTQDESSTKSSG 100
V V K+ +S I + + E +SSG
Sbjct: 847 TESRFQVDVEKNWVESSKITALLEELEG-LRSSG 879
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 104 (41.7 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHRREI 63
E++ L CP+C ++ C H FC CI+ + CP+C V R +I
Sbjct: 148 EEVDELLLCPVCNDMIKEPFISKCGHSFCYQCIIIHLSKSKTCPICMVYLTREQI 202
Score = 74 (31.1 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 35/190 (18%), Positives = 78/190 (41%)
Query: 230 PDVPSFSDLKDSEDISSSELS-PTAEVHGKSDGLDFFESEI-----FEWTQRACSPELLP 283
P V F + +E++S +++ + + K L+ + ++ ++ Q+ S ++
Sbjct: 225 PTVKQFRNTLSNENLSLHDINLMVSTLLEKKKNLEVHDQQVEYDILLDFLQKTRSQKMET 284
Query: 284 -SPAKTQVADAEENGKGLEAALQGSNTVVDISNGNATCV---IFEQGNGNENEGRCKALC 339
K Q++ E + K +E S + +SNG+ + +F G G ++ ++
Sbjct: 285 FKQLKRQISYLENDIKAIEHQKDISES---LSNGDLDMLRDALFI-GKGGDDSNIVLSI- 339
Query: 340 PRNTNPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSIS 399
P ++N NN N +N N+ + N + +N + N + + S
Sbjct: 340 PHHSNNNN--NNNNINPNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNNNNSS 397
Query: 400 NAKFSQKSSN 409
N S +S+
Sbjct: 398 NNNNSNNNSS 407
Score = 42 (19.8 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 24/105 (22%), Positives = 38/105 (36%)
Query: 585 NETQSPEGVRGSSDIGVLEKLHKTQRGALRKCETLAHKIQCSFCHSSENSEASGEM---V 641
+ T + GS D V T+R A+ E+ A+ F S N A G +
Sbjct: 767 SRTDPTQLASGSDDTRVKLWSTTTER-AITTIESKANICCVKFNPCSSNLIAFGSADHHI 825
Query: 642 HYYNGKPVSADYNGGSKIIHSHRNCTEWAPNVYFEDDTVINLEAE 686
HYY+ + Y I HR + + D +I+ +
Sbjct: 826 HYYDLR----QYKDPLLIFKGHRKAVSYVK--FMNKDEIISASTD 864
>UNIPROTKB|C9J1C6 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC016753 HOGENOM:HOG000031081
OrthoDB:EOG40VVQW HGNC:HGNC:28037 IPI:IPI00926363
ProteinModelPortal:C9J1C6 SMR:C9J1C6 STRING:C9J1C6
Ensembl:ENST00000441634 ArrayExpress:C9J1C6 Bgee:C9J1C6
Uniprot:C9J1C6
Length = 139
Score = 101 (40.6 bits), Expect = 0.00056, P = 0.00056
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 14 ELKCPICLSLLS---SAVSLTCNHVFCNACIVKSMKSGSNCPVCK 55
ELKCP+CL +A+ + C+H+F ++CI+ + ++CP+C+
Sbjct: 73 ELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCR 117
>MGI|MGI:1919736 [details] [associations]
symbol:Rnf219 "ring finger protein 219" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 MGI:MGI:1919736 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG40749
HOGENOM:HOG000008702 HOVERGEN:HBG054043 OrthoDB:EOG49CQ8Q
EMBL:AK013314 EMBL:AK020974 EMBL:BC029231 IPI:IPI00322413
IPI:IPI00473261 IPI:IPI00650028 UniGene:Mm.291811
ProteinModelPortal:Q8K2Y0 SMR:Q8K2Y0 PhosphoSite:Q8K2Y0
PRIDE:Q8K2Y0 UCSC:uc007uxc.1 UCSC:uc007uxd.1 UCSC:uc007uxe.1
InParanoid:Q8K2Y0 CleanEx:MM_RNF219 Genevestigator:Q8K2Y0
GermOnline:ENSMUSG00000022120 Uniprot:Q8K2Y0
Length = 722
Score = 113 (44.8 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 15 LKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVP 57
+ C ICL + V T NHVFC+ CI +K+ S CP C+VP
Sbjct: 16 ITCHICLGKVRQPVVCTNNHVFCSICIDLWLKNNSQCPACRVP 58
Score = 52 (23.4 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 37/136 (27%), Positives = 54/136 (39%)
Query: 171 EGGTVKNTTGELKSSSVVIRENPVINKEGTVLSP-FFWLRD-EEDREKSSQHTETDA-YI 227
EG + N+ GE+ S + K G+ LS +R E +R ++S DA Y+
Sbjct: 480 EGNAIANSVGEIPSK--------LSEKSGSCLSKRLSCIRSLEMNRTRTSSEASMDAAYL 531
Query: 228 TPPDVPSFSDLKDSEDISSSELS---PTAEVHGKS---DGLDFFESEIFEWTQRACSPEL 281
+ + D S S + + EV G S G +F E + Q S
Sbjct: 532 DK--ISELDSMMSESDNSKSPCNNGFKSVEVEGPSKSPQGREFLEEP--DKLQEG-SKLN 586
Query: 282 LPSPAKTQVADAEENG 297
L PA T AD E+G
Sbjct: 587 LSKPALT--ADGLESG 600
Score = 50 (22.7 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 128 RRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAK 169
R +V T T+P+CP K +YP P P A+
Sbjct: 317 RLADSGSVRQESTSRTEPNCPQNKD----RYPKPTEPRLGAR 354
>DICTYBASE|DDB_G0280987 [details] [associations]
symbol:DDB_G0280987 species:44689 "Dictyostelium
discoideum" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=IEA] [GO:0005779
"integral to peroxisomal membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR025654
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0280987
Prosite:PS00518 GO:GO:0046872 EMBL:AAFI02000040 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 eggNOG:NOG324377 PANTHER:PTHR23350
RefSeq:XP_640754.1 ProteinModelPortal:Q54UM2
EnsemblProtists:DDB0203940 GeneID:8622807 KEGG:ddi:DDB_G0280987
InParanoid:Q54UM2 OMA:YENAFDP Uniprot:Q54UM2
Length = 284
Score = 105 (42.0 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 16 KCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKV 56
+C ICLS + + CNH++C CI +KS +CP+CKV
Sbjct: 7 RCSICLSDIENQTKNNQCNHIYCFDCIFNWVKSNDSCPLCKV 48
Score = 48 (22.0 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 18/69 (26%), Positives = 25/69 (36%)
Query: 344 NPNNMIENGKLNKKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKF 403
N NN+ NG N R N Q D G T + ES+ + + +
Sbjct: 178 NNNNL--NGN-NYSNRNRNKYKQNHTTSGDIRGGYTNYNDDDYESDEYEDEDYYEIQDQI 234
Query: 404 SQKSSNRRG 412
KS+N G
Sbjct: 235 YNKSNNNSG 243
Score = 47 (21.6 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 326 GNGNENEGRCKALCPRNTNPNNM-IENGKLNKKGRKANSTAQKK 368
G GN N R L N+N NN+ N N T K+
Sbjct: 243 GGGNGNVSRNSKL--NNSNNNNLNFNNNNNNNNNNNDKPTPSKR 284
Score = 45 (20.9 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 212 EDREKSSQHTETDAYITPPDVPSFSDLKDSEDISSS 247
ED + +Q T+ YI D+ ++ + D ED+ S+
Sbjct: 123 EDTNRLNQITDR-LYILQKDLENYENAFDPEDLLST 157
>MGI|MGI:2142077 [details] [associations]
symbol:Trim68 "tripartite motif-containing 68" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
MGI:MGI:2142077 Prosite:PS00518 GO:GO:0005634 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0035035
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 HSSP:Q99728 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 eggNOG:NOG252602
OrthoDB:EOG4XSKPR EMBL:BC034249 IPI:IPI00169826 UniGene:Mm.39043
ProteinModelPortal:Q8K243 SMR:Q8K243 PhosphoSite:Q8K243
PRIDE:Q8K243 UCSC:uc009isf.2 InParanoid:Q8K243 CleanEx:MM_TRIM68
Genevestigator:Q8K243 GermOnline:ENSMUSG00000073968 Uniprot:Q8K243
Length = 485
Score = 126 (49.4 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 32/125 (25%), Positives = 57/125 (45%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV-------KSMKSGSNCPVCKVPYHR 60
+E + E+ CPIC++ L VS++C H FC++C+ +S CP+C+ P
Sbjct: 7 MEAIVEEVNCPICMTFLREPVSISCGHTFCHSCLSGLWKLPGESQNLSYTCPLCRAPVKP 66
Query: 61 REIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQ--VT-GGCQDKVE 117
R++R + ++V + + + + T K + C E VT C+ E
Sbjct: 67 RKLRPNWQLASVVDKVRLLGFCMEMGL-KTDVCDLHKEQLTMFCKEDDMVTCEACKQSPE 125
Query: 118 HQGTS 122
H+ S
Sbjct: 126 HEAHS 130
Score = 41 (19.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 459 HFMKTRKKCWKINSQTEEDFC---TKSKRRK 486
H K +++ WK+ +E T+ +RRK
Sbjct: 151 HLRKEQEEAWKLEVSEKEQAAIWKTQMERRK 181
>UNIPROTKB|F1N2H2 [details] [associations]
symbol:SCAF11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000245
"spliceosomal complex assembly" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0000245 GeneTree:ENSGT00530000063661
CTD:9169 OMA:ECDSFCS EMBL:DAAA02013014 IPI:IPI00716223
RefSeq:NP_001192496.1 UniGene:Bt.39641 PRIDE:F1N2H2
Ensembl:ENSBTAT00000002366 GeneID:538632 KEGG:bta:538632
NextBio:20877486 Uniprot:F1N2H2
Length = 1453
Score = 108 (43.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 16 KCPICLS-LLSSAVSL--TCNHVFCNACIVKSMKSGSNCPVCKVPY 58
+CPICLS LL + +CNHVFC CI+K ++ +CP+ + P+
Sbjct: 40 RCPICLSCLLEKEIGFPESCNHVFCLTCILKWAETLPSCPIDRKPF 85
Score = 71 (30.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 62/305 (20%), Positives = 121/305 (39%)
Query: 148 PTKKRVQVAQYPLPETPTQPAKLEGGTVKNT-TGELKSSSVVIRENPVINKEGTVLSPFF 206
P V+ Q L ++P + EGG ++ T ++SS V++ + V N++ +++
Sbjct: 591 PRDSTVKTEQ--LIDSPKLESS-EGGVIQAVDTKSIESSEVLLLGH-VENEDAEIIATCD 646
Query: 207 WLRDE-----EDRE----KSSQHTETDAYITPPDVPSFSDLKDSEDISSSELSPTAEVHG 257
+E +D E K + +T+ D + S + S ++ + L+ + H
Sbjct: 647 TSGNETLSSIQDSENSLFKKNLNTKLDKSLEEK-TESLVEYPRSTELPKTHLA-LIQKHF 704
Query: 258 KSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADAEE-NGKGLEAALQGSNTVVDISNG 316
D + E + E+ PS ADA++ N +E + Q + + D +N
Sbjct: 705 SEDNNEMIPMECDSFCSDQNESEIEPSVN----ADAKQVNENSVEHSSQKNMSSSDPANE 760
Query: 317 NATCVIFEQGNGNENEGRCKALCPRNTNP--NNMIENGKLNKKGRKANSTAQKKYAKRDT 374
V Q + N + KA PR ++ NK + +Q KR+T
Sbjct: 761 KVETV--SQPSENPVDATDKAKKPRTRRSRFHSPSTTWSPNKDTAREKKRSQSPSPKRET 818
Query: 375 NKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASVRTEIVD 434
K S + + + E+ ++ S S + + RR + + P D+ R+E +
Sbjct: 819 GKDSRKSRSPSPKKESVRGRRKSRSQSPKKDSARERRRSQSRSPKRDSAKEGK-RSESLS 877
Query: 435 QHGKN 439
+N
Sbjct: 878 PKREN 882
>UNIPROTKB|E1BSU9 [details] [associations]
symbol:LOC416147 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00590049 Ensembl:ENSGALT00000001837 OMA:PIEERRC
Uniprot:E1BSU9
Length = 274
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSM------KSGSNCPVCKVPYHR-REIRAA 66
EL C ICLSL + VSL C H FC C+ K + K+ +CP+C+V E++
Sbjct: 17 ELTCSICLSLYKNPVSLCCGHSFCKQCVQKVLSNQQQAKASYSCPLCRVDLGPILELQNN 76
Query: 67 PHMDNLVSVY 76
H+ ++V Y
Sbjct: 77 FHLCSIVETY 86
>ASPGD|ASPL0000065492 [details] [associations]
symbol:uvsH species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006312 "mitotic
recombination" evidence=IMP] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0031144
"proteasome localization" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003034 InterPro:IPR004580
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003684
GO:GO:0016874 GO:GO:0008270 GO:GO:0006281 GO:GO:0016567
EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACD01000127 eggNOG:COG5432 KO:K10627
TIGRFAMs:TIGR00599 EMBL:S79392 EMBL:Z49875 EMBL:Z49834 PIR:S55494
PIR:S57328 RefSeq:XP_680578.1 ProteinModelPortal:Q02398
STRING:Q02398 EnsemblFungi:CADANIAT00000127 GeneID:2869846
KEGG:ani:AN7309.2 HOGENOM:HOG000168108 OMA:YICKEFF
OrthoDB:EOG4F4WMB Uniprot:Q02398
Length = 443
Score = 117 (46.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 35/134 (26%), Positives = 60/134 (44%)
Query: 15 LKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAPHMDNLVS 74
L+C +C + V +C+H FC+ CI + + + CP C+ ++R + LV
Sbjct: 28 LRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCRSSDQELKLRRNWVVQELVE 87
Query: 75 VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQ---GTS----KGKRF 127
+K+ + I ++ T SGDL E + + K+E GT +G R
Sbjct: 88 GFKNARPS--ILQLARMAQTGTDDSGDLAAEEPASK--KRKIEPNAIVGTDGLPEEGIRT 143
Query: 128 RRTSK-ATVEPSGT 140
R S+ A+ +P T
Sbjct: 144 RSQSRGASRQPQAT 157
Score = 49 (22.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 468 WKINSQTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDT--VPQP---SLIPTFEDA 522
W N T+ + R+K D+ + + N S T + V QP SL P +D
Sbjct: 323 WSANYDTDFKALIANARKKNDAVIRSTIPNASQANSDTPRSAQLVDQPIEASLTP--QDV 380
Query: 523 DKK 525
D+K
Sbjct: 381 DEK 383
>UNIPROTKB|F1NGM4 [details] [associations]
symbol:TRIM35 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0045930 InterPro:IPR006574
SMART:SM00589 GeneTree:ENSGT00680000099496 EMBL:AADN02018387
EMBL:AADN02018388 IPI:IPI00588433 Ensembl:ENSGALT00000026786
OMA:HEEANLF Uniprot:F1NGM4
Length = 477
Score = 121 (47.7 bits), Expect = 0.00064, P = 0.00064
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN-CPVCKVPYHRREIRAAPHMDNL 72
EL CPIC AV+L C H FC CI +S + + CPVCK ++R ++NL
Sbjct: 10 ELLCPICYEPFREAVTLCCGHNFCKGCISRSWEHRQHTCPVCKETSSFDDLRINHTLNNL 69
Query: 73 VSV 75
V +
Sbjct: 70 VEM 72
>ZFIN|ZDB-GENE-030131-6192 [details] [associations]
symbol:mgrn1a "mahogunin, ring finger 1a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-030131-6192
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000231196 HOVERGEN:HBG061762
GeneTree:ENSGT00390000009925 OrthoDB:EOG47SSDK EMBL:CR456632
EMBL:CU207309 EMBL:BC171584 IPI:IPI00499990 RefSeq:XP_002663982.1
UniGene:Dr.20491 Ensembl:ENSDART00000074004 GeneID:100334163
KEGG:dre:100334163 Uniprot:B7ZVH3
Length = 554
Score = 108 (43.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHV-FCNACIVKSMKSGSNCPVCKVPYHRR-EIRA 65
E +C +CLS L + L C H+ CNAC +NCP+C++P+ +IRA
Sbjct: 268 ENSDNSSECVVCLSDLRDTLILPCRHLCLCNACADTLRYQANNCPICRLPFRALLQIRA 326
Score = 61 (26.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 153 VQVAQYPLPETPT-QPAKLEG--GTVKNTTGELKSSSV-VIRENPVINKEGTVLSPFFWL 208
VQ +P P + + G G N TG ++ ++ + +G+V SP +
Sbjct: 375 VQPVSPSIPSAPLYEEIQFSGEMGDPLNLTGRQQNGDPGALKGKGSKSPDGSVRSPSSPI 434
Query: 209 RDEEDREKSSQHTETDAYITPPDVPSFSDLKDS-EDISSSELSPTAEVHGKSDGLDFFES 267
++EED E+ S+ ++ P S S +D+ E +++ P + +S G+ S
Sbjct: 435 QEEEDEERMSELSDAQPQSVLPC--SLSPSEDTVEGVTAKPGLPNSGSESRSLGVSV--S 490
Query: 268 EIFE 271
EI +
Sbjct: 491 EILQ 494
>UNIPROTKB|E9PBZ8 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:AL662832 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00643713 SMR:E9PBZ8
Ensembl:ENST00000546617 Ensembl:ENST00000548540
Ensembl:ENST00000549051 Ensembl:ENST00000549269
Ensembl:ENST00000550625 Ensembl:ENST00000552165 Uniprot:E9PBZ8
Length = 411
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00065
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIR 64
LE + E C +CL L V + C H FC ACI + ++ CPVC+ R +R
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 65 AAPHMDNLVSVYKSME 80
+ ++V + K ++
Sbjct: 80 PNRQLGSMVEIAKQLQ 95
>UNIPROTKB|J9P2L6 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000045871 Uniprot:J9P2L6
Length = 229
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 24/73 (32%), Positives = 33/73 (45%)
Query: 1 MGDQRSHLEK-MGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPY 58
M QR HL K + C IC L ++T C H FC CIV+ + ++CP C +
Sbjct: 1 MATQRKHLVKDFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGIQV 60
Query: 59 HRREIRAAPHMDN 71
H +DN
Sbjct: 61 HETNPLEMLRLDN 73
>UNIPROTKB|J9PBI0 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 GeneTree:ENSGT00530000063064
CTD:54941 KO:K12170 OMA:RTRCGHV EMBL:AAEX03005423
RefSeq:XP_547620.3 Ensembl:ENSCAFT00000044835 GeneID:490498
KEGG:cfa:490498 Uniprot:J9PBI0
Length = 232
Score = 106 (42.4 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 17 CPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS-NCPVCKVPYHRREIRAAPHMDNLVSV 75
C +CL +L V C HVFC +CI S+K+ CP C+ + A + S
Sbjct: 37 CSVCLEVLHQPVRTRCGHVFCRSCIATSLKNNRWTCPYCRAYLPSEGVPATDVAKRMKSE 96
Query: 76 YKS 78
Y++
Sbjct: 97 YQN 99
Score = 50 (22.7 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 736 MLCPLHTSSNLPNENPGS 753
+ CPL LPNENPGS
Sbjct: 168 VFCPL--CRLLPNENPGS 183
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 126 (49.4 bits), Expect = 0.00073, P = 0.00073
Identities = 85/533 (15%), Positives = 203/533 (38%)
Query: 75 VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGKRFRRTSKAT 134
V S EV+S V+ SS ++ +V+ + Q TS + +S+ +
Sbjct: 324 VSSSSEVSSSSE--VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVS 381
Query: 135 VEPSGTVCTKPSCPTKKRVQVAQYPLPETP--TQPAKLEGGTVKNTTGELKSSSVVIREN 192
S V + + V + + + + +++ + +++ E+ SSS VI +
Sbjct: 382 SSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSS 441
Query: 193 PVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSDL-KDSEDISSSE--- 248
V++ V S + + SS+ + + + V S S++ S ++SSS
Sbjct: 442 EVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEV 501
Query: 249 LSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADAEENGKGLEAALQGSN 308
+S ++EV S+ + SE+ ++ + S E+ S + ++ +E E + S
Sbjct: 502 VSSSSEVSSSSEVVSS-SSEVSSSSEVSSSSEV--SSSSQVISSSEIVSSSSEVSSSSSE 558
Query: 309 TVVDISNGNATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKK 368
V S +++ + + + + +++ + +I + ++ + S++ +
Sbjct: 559 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSS-SQVISSSEVVSSSSEVVSSSSEV 617
Query: 369 YAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASV 428
+ + + S ++S S + V + ++++ SS+ + ++E + + +S
Sbjct: 618 SSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS- 676
Query: 429 RTEIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEEDFCTKSKRRKVD 488
+E+V + S +S + S + + + ++ S + E S
Sbjct: 677 SSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSE---VSSSSEVSS 733
Query: 489 STEVNVLENVSVVQKKTYKDTVPQPSLIPTFEDADKKEXXXXXXXXXXXXXXXXXXXXXC 548
S+EV+ VS + + V S + +
Sbjct: 734 SSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISS 793
Query: 549 DKELQWNKRMKASFSGISKDGLVGESKVQEGCSSTANE---TQSPEGVRGSSD 598
++ + + +S IS V S + SS+A+ + S E + SS+
Sbjct: 794 SSKVSSSSEITSSSECISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSSE 846
Score = 126 (49.4 bits), Expect = 0.00073, P = 0.00073
Identities = 94/571 (16%), Positives = 214/571 (37%)
Query: 62 EIRAAPHMDNLVSVYKSMEVASGINIF----VTQDESSTKSSGDLICGEQVTGGCQDKVE 117
E+ ++ + + V S EV+S + V S SS +++ +
Sbjct: 412 EVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 471
Query: 118 HQGTSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKN 177
S + +S+ V S V + S +V+ E + +++ + +
Sbjct: 472 SSEVSSSSQVTSSSEI-VSSSSEVSSSSSEVVSSSSEVSSSS--EVVSSSSEVSSSSEVS 528
Query: 178 TTGELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSD 237
++ E+ SSS VI + +++ V S E S + ++ + +V S S+
Sbjct: 529 SSSEVSSSSQVISSSEIVSSSSEVSSS----SSEVVSSSSEVSSSSEVVSSSSEVSSSSE 584
Query: 238 LKDSEDISSS-ELSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADAEEN 296
+ S ++SSS ++ ++EV S + SE+ ++ + S E+ S + ++ +
Sbjct: 585 VSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSS 644
Query: 297 GKGLEAA-LQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKLN 355
+ ++ + S++ V S+ E + +E + ++ + + + +++
Sbjct: 645 SQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEV----SSSSEVSSSSEVS 700
Query: 356 KKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCA 415
+ +S+ + + S ++S S + V + +S++ S+ SS+ T +
Sbjct: 701 SSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSS--SEVSSSSEVTSS 758
Query: 416 AEPIPDNVLAASVRT--EIVDQ-HGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINS 472
+ I + ++ V + E+ + S++ +S K S E + ++NS
Sbjct: 759 SSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISSTSEVNS 818
Query: 473 QTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPTFEDADKKEXXXXXX 532
+ E + S +V S+ + + S + + T I + +
Sbjct: 819 SSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSSTECISSSSEV----ISSSEV 874
Query: 533 XXXXXXXXXXXXXXXCDKELQWNKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEG 592
KE+ ++++ +S S S V +S SS + ++
Sbjct: 875 TSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEFVSKSSEHSSLSSESCPSEETST 934
Query: 593 VRGSSDIGVLEKLH-----KTQRGALRKCET 618
V +S V K H KT KC T
Sbjct: 935 VSETSSETVTCKHHGCSKTKTHHSTPTKCVT 965
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 126 (49.4 bits), Expect = 0.00073, P = 0.00073
Identities = 85/533 (15%), Positives = 203/533 (38%)
Query: 75 VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGKRFRRTSKAT 134
V S EV+S V+ SS ++ +V+ + Q TS + +S+ +
Sbjct: 324 VSSSSEVSSSSE--VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVS 381
Query: 135 VEPSGTVCTKPSCPTKKRVQVAQYPLPETP--TQPAKLEGGTVKNTTGELKSSSVVIREN 192
S V + + V + + + + +++ + +++ E+ SSS VI +
Sbjct: 382 SSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSS 441
Query: 193 PVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSDL-KDSEDISSSE--- 248
V++ V S + + SS+ + + + V S S++ S ++SSS
Sbjct: 442 EVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEV 501
Query: 249 LSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADAEENGKGLEAALQGSN 308
+S ++EV S+ + SE+ ++ + S E+ S + ++ +E E + S
Sbjct: 502 VSSSSEVSSSSEVVSS-SSEVSSSSEVSSSSEV--SSSSQVISSSEIVSSSSEVSSSSSE 558
Query: 309 TVVDISNGNATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKLNKKGRKANSTAQKK 368
V S +++ + + + + +++ + +I + ++ + S++ +
Sbjct: 559 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSS-SQVISSSEVVSSSSEVVSSSSEV 617
Query: 369 YAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCAAEPIPDNVLAASV 428
+ + + S ++S S + V + ++++ SS+ + ++E + + +S
Sbjct: 618 SSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS- 676
Query: 429 RTEIVDQHGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINSQTEEDFCTKSKRRKVD 488
+E+V + S +S + S + + + ++ S + E S
Sbjct: 677 SSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSE---VSSSSEVSS 733
Query: 489 STEVNVLENVSVVQKKTYKDTVPQPSLIPTFEDADKKEXXXXXXXXXXXXXXXXXXXXXC 548
S+EV+ VS + + V S + +
Sbjct: 734 SSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISS 793
Query: 549 DKELQWNKRMKASFSGISKDGLVGESKVQEGCSSTANE---TQSPEGVRGSSD 598
++ + + +S IS V S + SS+A+ + S E + SS+
Sbjct: 794 SSKVSSSSEITSSSECISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSSE 846
Score = 126 (49.4 bits), Expect = 0.00073, P = 0.00073
Identities = 94/571 (16%), Positives = 214/571 (37%)
Query: 62 EIRAAPHMDNLVSVYKSMEVASGINIF----VTQDESSTKSSGDLICGEQVTGGCQDKVE 117
E+ ++ + + V S EV+S + V S SS +++ +
Sbjct: 412 EVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 471
Query: 118 HQGTSKGKRFRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKN 177
S + +S+ V S V + S +V+ E + +++ + +
Sbjct: 472 SSEVSSSSQVTSSSEI-VSSSSEVSSSSSEVVSSSSEVSSSS--EVVSSSSEVSSSSEVS 528
Query: 178 TTGELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYITPPDVPSFSD 237
++ E+ SSS VI + +++ V S E S + ++ + +V S S+
Sbjct: 529 SSSEVSSSSQVISSSEIVSSSSEVSSS----SSEVVSSSSEVSSSSEVVSSSSEVSSSSE 584
Query: 238 LKDSEDISSS-ELSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADAEEN 296
+ S ++SSS ++ ++EV S + SE+ ++ + S E+ S + ++ +
Sbjct: 585 VSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSS 644
Query: 297 GKGLEAA-LQGSNTVVDISNGNATCVIFEQGNGNENEGRCKALCPRNTNPNNMIENGKLN 355
+ ++ + S++ V S+ E + +E + ++ + + + +++
Sbjct: 645 SQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEV----SSSSEVSSSSEVS 700
Query: 356 KKGRKANSTAQKKYAKRDTNKGSTTPATSNEESENFVQKQTSISNAKFSQKSSNRRGTCA 415
+ +S+ + + S ++S S + V + +S++ S+ SS+ T +
Sbjct: 701 SSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSS--SEVSSSSEVTSS 758
Query: 416 AEPIPDNVLAASVRT--EIVDQ-HGKNIGSDLPTSLGKKQGSDEDLHFMKTRKKCWKINS 472
+ I + ++ V + E+ + S++ +S K S E + ++NS
Sbjct: 759 SSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISSTSEVNS 818
Query: 473 QTEEDFCTKSKRRKVDSTEVNVLENVSVVQKKTYKDTVPQPSLIPTFEDADKKEXXXXXX 532
+ E + S +V S+ + + S + + T I + +
Sbjct: 819 SSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSSTECISSSSEV----ISSSEV 874
Query: 533 XXXXXXXXXXXXXXXCDKELQWNKRMKASFSGISKDGLVGESKVQEGCSSTANETQSPEG 592
KE+ ++++ +S S S V +S SS + ++
Sbjct: 875 TSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEFVSKSSEHSSLSSESCPSEETST 934
Query: 593 VRGSSDIGVLEKLH-----KTQRGALRKCET 618
V +S V K H KT KC T
Sbjct: 935 VSETSSETVTCKHHGCSKTKTHHSTPTKCVT 965
>UNIPROTKB|F8WD60 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 IPI:IPI00925077
ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070
ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60
Length = 116
Score = 97 (39.2 bits), Expect = 0.00075, P = 0.00075
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNC-PVCK 55
E +C IC+ +L V+L CNH C C +++ S C P C+
Sbjct: 13 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCR 55
>UNIPROTKB|K7GL56 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063064 EMBL:CU019565
Ensembl:ENSSSCT00000035939 Uniprot:K7GL56
Length = 206
Score = 105 (42.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 17 CPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS-NCPVCK 55
C +CL +L V C HVFC +CI S+K+ CP C+
Sbjct: 37 CSVCLEVLHHPVRTRCGHVFCRSCIATSLKNNKWTCPYCR 76
Score = 48 (22.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 736 MLCPLHTSSNLPNENPGS 753
+ CPL +PNENPGS
Sbjct: 168 VFCPL--CRLIPNENPGS 183
>UNIPROTKB|F1RWB5 [details] [associations]
symbol:F1RWB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104307 EMBL:FP067415
Ensembl:ENSSSCT00000009701 OMA:MEEVANQ Uniprot:F1RWB5
Length = 341
Score = 118 (46.6 bits), Expect = 0.00077, P = 0.00077
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 4 QRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHR 60
Q + L ++ E CPICL L V+ C H FC++C+++ ++ CPVC
Sbjct: 3 QAASLAQLQAEASCPICLDYLRDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPD 62
Query: 61 REIRAAPHMDNLVSVYKSM 79
R +R + ++V V K +
Sbjct: 63 RSLRRNTQLCHMVDVVKQL 81
>UNIPROTKB|F1RWB1 [details] [associations]
symbol:LOC100513607 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP067415 RefSeq:XP_003129044.1
Ensembl:ENSSSCT00000009705 GeneID:100513607 KEGG:ssc:100513607
OMA:IERIYST Uniprot:F1RWB1
Length = 461
Score = 120 (47.3 bits), Expect = 0.00078, P = 0.00078
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 4 QRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHR 60
Q + L ++ E CPICL L V+ C H FC++C+++ ++ CPVC
Sbjct: 3 QAASLAQLQAEASCPICLDYLQDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPD 62
Query: 61 REIRAAPHMDNLVSVYKSMEVASG 84
R +R + ++V V K + G
Sbjct: 63 RSLRRNTQLCHMVDVVKQLPNMEG 86
>UNIPROTKB|F1NVB6 [details] [associations]
symbol:F1NVB6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 Prosite:PS00518 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0000278
GeneTree:ENSGT00400000022306 OMA:LYWGCAR EMBL:AADN02034798
IPI:IPI00597975 Ensembl:ENSGALT00000003414 Uniprot:F1NVB6
Length = 662
Score = 122 (48.0 bits), Expect = 0.00079, P = 0.00079
Identities = 46/180 (25%), Positives = 74/180 (41%)
Query: 9 EKMGRELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRAAP 67
+KM L C IC LL VSL C H FC AC M+ S CP C+ P R I
Sbjct: 288 DKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER--ICKNH 345
Query: 68 HMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQ-GTSKGKR 126
++NLV Y N +D+ + + + I + + Q KV +G
Sbjct: 346 ILNNLVEAYLIQHPDKCRN----EDDVRSMDARNKITQDML----QPKVRRSFSDEEGSS 397
Query: 127 FRRTSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTGELKSSS 186
+ V+ + ++P ++ ++P+P P + E G ++ G+ S+S
Sbjct: 398 EDLLELSDVDSESSDISQPYIVCRQCPGYRRHPVPALPGTGQETEAGGMQ-ALGDAPSTS 456
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 121 (47.7 bits), Expect = 0.00080, P = 0.00080
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 16 KCPICLSLLSSAVSLTCNHVFCNACIVKSMK-SGSNCPV 53
+CPICL L AV C H FC ACIVKS++ +G CPV
Sbjct: 71 ECPICLMALREAVQTPCGHRFCKACIVKSLRDAGHKCPV 109
>MGI|MGI:2137359 [details] [associations]
symbol:Trim34a "tripartite motif-containing 34A"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070206 "protein trimerization" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2137359 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 OrthoDB:EOG4229JJ
EMBL:AF220139 EMBL:AF220140 EMBL:AF220141 IPI:IPI00121329
IPI:IPI00322251 IPI:IPI00462917 RefSeq:NP_109609.2
UniGene:Mm.326945 ProteinModelPortal:Q99PP6 SMR:Q99PP6
STRING:Q99PP6 PRIDE:Q99PP6 DNASU:94094 Ensembl:ENSMUST00000106854
Ensembl:ENSMUST00000143414 GeneID:94094 KEGG:mmu:94094
UCSC:uc009ivr.1 UCSC:uc009ivs.1 UCSC:uc009ivt.1 CTD:94094
eggNOG:NOG259921 InParanoid:Q99PP6 KO:K11999 NextBio:352091
Bgee:Q99PP6 CleanEx:MM_TRIM34 Genevestigator:Q99PP6
GermOnline:ENSMUSG00000056144 Uniprot:Q99PP6
Length = 485
Score = 120 (47.3 bits), Expect = 0.00084, P = 0.00084
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM------KSGSNCPVCKVPYHRR 61
L + + CP+C LL+ A+SL C H C AC++ + S+CPVC +
Sbjct: 6 LTNIQEKTTCPVCQELLTKALSLGCGHRVCQACLITKKNAVINPREKSSCPVCGTRFSLE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLI--CGEQ---VTGGCQDKV 116
++A H+ N+V +++ I T+ + L+ C E + C+
Sbjct: 66 NLQANKHLANVVERLGEVKLKPDIG---TKRDLCVHHGEKLLLFCKEDKKAICWVCERSQ 122
Query: 117 EHQG 120
EH+G
Sbjct: 123 EHRG 126
>UNIPROTKB|F1MVU7 [details] [associations]
symbol:TRIM58 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646 CTD:25893
KO:K12027 EMBL:DAAA02020134 EMBL:DAAA02020135 IPI:IPI00711932
RefSeq:XP_002689127.1 RefSeq:XP_603937.2 UniGene:Bt.87597
ProteinModelPortal:F1MVU7 PRIDE:F1MVU7 Ensembl:ENSBTAT00000009824
GeneID:525584 KEGG:bta:525584 OMA:FQVDIKL NextBio:20874195
Uniprot:F1MVU7
Length = 487
Score = 120 (47.3 bits), Expect = 0.00084, P = 0.00084
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 9 EKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM-KSGSN------CPVCKVPYHRR 61
E++ E +CP+CL L + VS+ C H FC CI + KS S CP C+ P+
Sbjct: 8 ERLCEEARCPVCLDFLQNPVSVDCGHSFCLRCISEFCEKSDSAQGGIYACPQCRGPFRLE 67
Query: 62 EIRAAPHMDNLVSVYKSMEVA---SGINIFVTQDESSTK 97
R + +LV + + + SG + V E T+
Sbjct: 68 SFRPNRQLASLVDSVRQLGLGAEPSGARLCVRHGEELTR 106
>UNIPROTKB|F1P646 [details] [associations]
symbol:TRIM39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
OMA:KESNRCE EMBL:AAEX03008197 ProteinModelPortal:F1P646
Ensembl:ENSCAFT00000000617 Uniprot:F1P646
Length = 488
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIR 64
LE + E C +CL L V + C H FC ACI + ++ CPVC+ R +R
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 65 AAPHMDNLVSVYKSME 80
+ ++V + K ++
Sbjct: 80 PNRQLGSMVEIAKQLQ 95
>UNIPROTKB|F5H297 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AL662832
EMBL:AL662795 EMBL:AL773535 EMBL:BX294158 EMBL:CR759928
EMBL:BX927214 EMBL:CR759281 EMBL:BX248580 HGNC:HGNC:10065
IPI:IPI01011847 SMR:F5H297 Ensembl:ENST00000540416
Ensembl:ENST00000546886 Ensembl:ENST00000547272
Ensembl:ENST00000547462 Ensembl:ENST00000547598
Ensembl:ENST00000552594 Ensembl:ENST00000552805 Uniprot:F5H297
Length = 488
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIR 64
LE + E C +CL L V + C H FC ACI + ++ CPVC+ R +R
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 65 AAPHMDNLVSVYKSME 80
+ ++V + K ++
Sbjct: 80 PNRQLGSMVEIAKQLQ 95
>UNIPROTKB|I7FTT9 [details] [associations]
symbol:TRIM39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 CTD:56658 KO:K12015 OMA:KESNRCE
EMBL:CU498826 EMBL:AB158488 RefSeq:NP_001121951.1 UniGene:Ssc.96738
ProteinModelPortal:I7FTT9 Ensembl:ENSSSCT00000001458
Ensembl:ENSSSCT00000035503 Ensembl:ENSSSCT00000035776
GeneID:100151742 KEGG:ssc:100151742 Uniprot:I7FTT9
Length = 488
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIR 64
LE + E C +CL L V + C H FC ACI + ++ CPVC+ R +R
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 65 AAPHMDNLVSVYKSME 80
+ ++V + K ++
Sbjct: 80 PNRQLGSMVEIAKQLQ 95
>MGI|MGI:1890659 [details] [associations]
symbol:Trim39 "tripartite motif-containing 39" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
MGI:MGI:1890659 Pfam:PF00097 Prosite:PS00518 GO:GO:0005829
GO:GO:0005739 GO:GO:0006915 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOVERGEN:HBG001357 HOGENOM:HOG000234134 CTD:56658 eggNOG:NOG238084
KO:K12015 EMBL:AB046382 EMBL:AK053507 EMBL:BC031540 IPI:IPI00308801
IPI:IPI00480364 IPI:IPI00480438 RefSeq:NP_077788.2 UniGene:Mm.40624
ProteinModelPortal:Q9ESN2 SMR:Q9ESN2 STRING:Q9ESN2
PhosphoSite:Q9ESN2 PRIDE:Q9ESN2 GeneID:79263 KEGG:mmu:79263
UCSC:uc008ckv.1 InParanoid:Q9ESN2 OrthoDB:EOG480HWD NextBio:349899
CleanEx:MM_TRIM39 Genevestigator:Q9ESN2
GermOnline:ENSMUSG00000045409 Uniprot:Q9ESN2
Length = 488
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIR 64
LE + E C +CL L V + C H FC ACI + ++ CPVC+ R +R
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 65 AAPHMDNLVSVYKSME 80
+ ++V + K ++
Sbjct: 80 PNRQLGSMVEIAKQLQ 95
>RGD|1303115 [details] [associations]
symbol:Trim39 "tripartite motif-containing 39" species:10116
"Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 Pfam:PF00097 RGD:1303115 Prosite:PS00518
GO:GO:0005829 GO:GO:0005739 GO:GO:0006915 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOGENOM:HOG000234133
HOVERGEN:HBG001357 GeneTree:ENSGT00700000104307 CTD:56658
eggNOG:NOG238084 KO:K12015 OrthoDB:EOG480HWD EMBL:BX883050
IPI:IPI00417367 RefSeq:NP_998727.1 UniGene:Rn.229996
ProteinModelPortal:Q6MFZ5 SMR:Q6MFZ5 STRING:Q6MFZ5
Ensembl:ENSRNOT00000001021 GeneID:309591 KEGG:rno:309591
UCSC:RGD:1303115 InParanoid:Q6MFZ5 NextBio:661022
ArrayExpress:Q6MFZ5 Genevestigator:Q6MFZ5
GermOnline:ENSRNOG00000000785 Uniprot:Q6MFZ5
Length = 488
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK---SMKSGSNCPVCKVPYHRREIR 64
LE + E C +CL L V + C H FC ACI + ++ CPVC+ R +R
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 65 AAPHMDNLVSVYKSME 80
+ ++V + K ++
Sbjct: 80 PNRQLGSMVEIAKQLQ 95
WARNING: HSPs involving 10 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 811 776 0.00093 121 3 11 23 0.47 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 260
No. of states in DFA: 624 (66 KB)
Total size of DFA: 426 KB (2203 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 88.17u 0.21s 88.38t Elapsed: 00:00:04
Total cpu time: 88.20u 0.22s 88.42t Elapsed: 00:00:04
Start: Tue May 21 19:26:24 2013 End: Tue May 21 19:26:28 2013
WARNINGS ISSUED: 2