BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003547
(811 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RXD4|BRCA1_ARATH Protein BREAST CANCER SUSCEPTIBILITY 1 homolog OS=Arabidopsis
thaliana GN=BRCA1 PE=2 SV=1
Length = 941
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/297 (51%), Positives = 197/297 (66%), Gaps = 15/297 (5%)
Query: 6 SHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSNCPVCKVPYHRREIRA 65
SHLE+MGRELKCPICLSL +SAVSL+CNHVFCNACIVKSMK + CPVCK+PYHRREIR
Sbjct: 5 SHLERMGRELKCPICLSLYNSAVSLSCNHVFCNACIVKSMKMDATCPVCKIPYHRREIRG 64
Query: 66 APHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGK 125
APHMD+LVS+YK+ME ASGI +FV+Q+ S + V DK QG+ KG+
Sbjct: 65 APHMDSLVSIYKNMEDASGIKLFVSQNNPSPSDKEKQVRDASVEKA-SDK-NRQGSRKGR 122
Query: 126 RFRR-----TSKATVEPSGTVCTKPSCPTKKRVQVAQYPLPETPTQPAKLEGGTVKNTTG 180
+R T + V+ G + KPS TKKRVQ+ Q E+ T+P + T +
Sbjct: 123 ASKRNEYGKTKEIDVDAPGPIVMKPSSQTKKRVQLLQNLSAESLTKPTE-SVETAEKPKD 181
Query: 181 ELKSSSVVIRENPVINKEGTVLSPFFWLRDEEDREKSSQHTETDAYI--TPPDVPSFSDL 238
+++ + + E+P +NKEG LSPFFWLRDE+D E SSQ TE+D + TP +VPSFSDL
Sbjct: 182 YTENTVIRLDEHPSLNKEGN-LSPFFWLRDEDDGENSSQRTESDQLLGTTPVNVPSFSDL 240
Query: 239 KDSEDISSSELSPTAEVHGKSDGLDFFESEIFEWTQRACSPELLPSPAKTQVADAEE 295
DS+ S S+ + K + D F+SE+FEWTQR CSPE+LPSP K +V +E
Sbjct: 241 MDSDHESPSK----EDEQQKPNPGDMFDSEMFEWTQRPCSPEILPSPVKAKVLGRDE 293
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 189/312 (60%), Gaps = 23/312 (7%)
Query: 508 DTVPQ---PSLIPTFEDADKKE---SLLKGKTTKTAKKTKTSSNLKCDKELQWNKRMKAS 561
DT P+ P+ P+ + +K S LK + KT KKT + LK D + +K +
Sbjct: 440 DTHPEKRSPTEKPSLKKRGRKSNASSSLKDLSGKTQKKT-SEKKLKLDSHMISSKATQPH 498
Query: 562 FSGISKDGLVGESKVQEGCSSTANETQSPEGVRGSSDIGVLEK---LHKTQRGA---LRK 615
+GI GL Q+ + N +S G + + V+EK ++K+ G LR+
Sbjct: 499 GNGILTAGLNQGGDKQD----SRNNRKSTVG-KDDHTMQVIEKCSTINKSSSGGSAHLRR 553
Query: 616 CE-TLAHKIQCSFCHSSENSEASGEMVHYYNGKPVSADYNGGSKIIHSHRNCTEWAPNVY 674
C +L K C+FC SE++EASGEM HYY G+PVSAD+NGGSK+IH H+NC EWAPNVY
Sbjct: 554 CNGSLTKKFTCAFCQCSEDTEASGEMTHYYRGEPVSADFNGGSKVIHVHKNCAEWAPNVY 613
Query: 675 FEDDTVINLEAELARSRRIKCCCCGLKGAALGCYEKTCRKSFHVPCAKLILQCRWDTDNF 734
F D T++NL+ EL RSRRI C CCGLKGAALGCY K+C+ SFHV CAKLI +CRWD F
Sbjct: 614 FNDLTIVNLDVELTRSRRISCSCCGLKGAALGCYNKSCKNSFHVTCAKLIPECRWDNVKF 673
Query: 735 VMLCPLHTSSNLPNENPGSQESR-KKCISKKLLTQHNKVAFKSDIS---TNSWQSWENKL 790
VMLCPL S LP E S++ + K+ + L +Q +V+ K++I + + KL
Sbjct: 674 VMLCPLDASIKLPCEEANSKDRKCKRTPKEPLHSQPKQVSGKANIRELHIKQFHGFSKKL 733
Query: 791 VLCCSALTVGEQ 802
VL CS LTV E+
Sbjct: 734 VLSCSGLTVEEK 745
>sp|Q24742|TRX_DROVI Histone-lysine N-methyltransferase trithorax OS=Drosophila virilis
GN=trx PE=3 SV=1
Length = 3828
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 663 HRNCTEWAPNVYFE-DDTVINLEAELARSRRIKCCCCGLKGAALGCYEKTCRKSFHVPCA 721
H NC W+ V+ E D ++ N+ + +AR R IKC CG +GA +GC K+C + +H PCA
Sbjct: 1738 HINCAMWSAEVFEEIDGSLQNVHSAVARGRMIKCTVCGNRGATVGCNVKSCGEHYHYPCA 1797
Query: 722 KLILQCRWDTDNFVMLCPLHTSSNL 746
+ I C + TD M CP H + L
Sbjct: 1798 RTI-DCAFLTDK-SMYCPAHARNAL 1820
>sp|P20659|TRX_DROME Histone-lysine N-methyltransferase trithorax OS=Drosophila
melanogaster GN=trx PE=1 SV=4
Length = 3726
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 663 HRNCTEWAPNVYFE-DDTVINLEAELARSRRIKCCCCGLKGAALGCYEKTCRKSFHVPCA 721
H NC W+ V+ E D ++ N+ + +AR R IKC CG +GA +GC ++C + +H PCA
Sbjct: 1764 HTNCAMWSAEVFEEIDGSLQNVHSAVARGRMIKCTVCGNRGATVGCNVRSCGEHYHYPCA 1823
Query: 722 KLILQCRWDTDNFVMLCPLH 741
+ I C + TD M CP H
Sbjct: 1824 RSI-DCAFLTDK-SMYCPAH 1841
>sp|P15533|TR30A_MOUSE Tripartite motif-containing protein 30A OS=Mus musculus
GN=Trim30a PE=1 SV=2
Length = 496
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 6 SHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG------SNCPVCKVPYH 59
S LE + E+ CPICL LL VS CNH FC ACI + +S NCPVC+VPY
Sbjct: 4 SVLEMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 63
Query: 60 RREIRAAPHMDNLVSVYKSME 80
+R H+ N+V K +
Sbjct: 64 FGNLRPNLHVANIVERLKGFK 84
>sp|Q9EPQ8|TCF20_MOUSE Transcription factor 20 OS=Mus musculus GN=Tcf20 PE=1 SV=2
Length = 1983
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 663 HRNCTEWAPNVYFEDDTVINLEAELARSRRIKCCCCGLKGAALGCYEKTCRKSFHVPCAK 722
H C WA +Y + L+ L +R +KC C GA LGCY K C +H PCA
Sbjct: 1882 HEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCA- 1940
Query: 723 LILQCRWDTDNFVMLCPLH 741
+ C +NF + CP H
Sbjct: 1941 IDADCLLHEENFSVRCPKH 1959
>sp|Q9UGU0|TCF20_HUMAN Transcription factor 20 OS=Homo sapiens GN=TCF20 PE=1 SV=3
Length = 1960
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 663 HRNCTEWAPNVYFEDDTVINLEAELARSRRIKCCCCGLKGAALGCYEKTCRKSFHVPCAK 722
H C WA +Y + L+ L +R +KC C GA LGCY K C +H PCA
Sbjct: 1855 HEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCA- 1913
Query: 723 LILQCRWDTDNFVMLCPLH 741
+ C +NF + CP H
Sbjct: 1914 IDADCLLHEENFSVRCPKH 1932
>sp|Q9C035|TRIM5_HUMAN Tripartite motif-containing protein 5 OS=Homo sapiens GN=TRIM5
PE=1 SV=1
Length = 493
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 NIRPNRHVANIVEKLREVKLS 86
>sp|Q1ACD8|TRIM5_PANPA Tripartite motif-containing protein 5 OS=Pan paniscus GN=TRIM5
PE=3 SV=1
Length = 493
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 NIRPNRHVANIVEKLREVKLS 86
>sp|Q5D7J1|TRIM5_PANTR Tripartite motif-containing protein 5 OS=Pan troglodytes GN=TRIM5
PE=2 SV=1
Length = 493
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 NIRPNRHVANIVEKLREVKLS 86
>sp|Q5C8T6|TRIM5_GORGO Tripartite motif-containing protein 5 OS=Gorilla gorilla gorilla
GN=TRIM5 PE=2 SV=1
Length = 493
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ KSM K S+CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHEKSMLDKGESSCPVCRISYQPE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 NIRPNRHVANIVEKLREVKLS 86
>sp|Q5D7I6|TRIM5_ALOSA Tripartite motif-containing protein 5 OS=Alouatta sara GN=TRIM5
PE=3 SV=1
Length = 551
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG--SNCPVCKVPYHRREIRA 65
L + E+ CPICL LL+ +SL C H FC ACI + K +CP+C+V YH +R
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESRERSCPLCRVSYHSENLRP 65
Query: 66 APHMDNL 72
H+ N+
Sbjct: 66 NRHLANI 72
>sp|Q3ZEE5|TRIM5_HYLLA Tripartite motif-containing protein 5 OS=Hylobates lar GN=TRIM5
PE=3 SV=1
Length = 493
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVK----SMKSGS-NCPVCKVPYHRRE 62
L + E+ CPICL LL+ +SL C H FC AC+ SM G +CPVC++ Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDGERSCPVCRISYQHKN 65
Query: 63 IRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 IRPNRHVANIVEKLREVKLS 85
>sp|Q5C8T8|TRIM5_PONAB Tripartite motif-containing protein 5 OS=Pongo abelii GN=TRIM5
PE=2 SV=1
Length = 493
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K + +CPVC+V Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSTLDKGERSCPVCRVSYQPK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 NIRPNRHVANIVEKLREVKLS 86
>sp|Q2YEM8|TRIM5_HOOHO Tripartite motif-containing protein 5 OS=Hoolock hoolock GN=TRIM5
PE=3 SV=1
Length = 494
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG------SNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K+ +CPVC++ Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDEGERSCPVCRISYQHK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 NIRPNRHVANIVEKLREVKLS 86
>sp|Q2YEM9|TRIM5_PONPY Tripartite motif-containing protein 5 OS=Pongo pygmaeus GN=TRIM5
PE=2 SV=1
Length = 493
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K + +CPVC+V Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSTLDKGERSCPVCRVSYQPK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 NIRPNRHVANIVEKLREVKLS 86
>sp|Q9VB08|RING1_DROME E3 ubiquitin-protein ligase RING1 OS=Drosophila melanogaster GN=Sce
PE=1 SV=1
Length = 435
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 14 ELKCPICLSLLSSAVSLT-CNHVFCNACIVKSMKSGS-NCPVC-KVPYHRREIRAAPHMD 70
EL CPICL +L ++ C H FC+ CIV +++SG+ CP C K +R +RA P+ D
Sbjct: 43 ELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNFD 102
Query: 71 NLVS-VYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQGTSKGKRFR 128
L+S +Y S E I V + T+S L+ + ++ Q ++ +RFR
Sbjct: 103 LLISKIYPSREEYEAIQEKVMAKFNQTQSQQALV------NSINEGIKLQSQNRPQRFR 155
>sp|Q5D7J0|TRIM5_COLGU Tripartite motif-containing protein 5 OS=Colobus guereza GN=TRIM5
PE=3 SV=1
Length = 495
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 ENIRPNRHVANIVEKLREVKLS 87
>sp|Q5D7I9|TRIM5_PYGNE Tripartite motif-containing protein 5 OS=Pygathrix nemaeus
GN=TRIM5 PE=3 SV=1
Length = 495
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
IR H+ N+V + ++++
Sbjct: 66 ENIRPNRHVANIVEKLREVKLS 87
>sp|Q9BYJ4|TRI34_HUMAN Tripartite motif-containing protein 34 OS=Homo sapiens GN=TRIM34
PE=1 SV=2
Length = 488
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACI-------VKSMKSGSNCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H C ACI V SM S+CPVC + Y
Sbjct: 6 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
++A H+ N+V K ++++
Sbjct: 66 EHLQANQHLANIVERLKEVKLS 87
>sp|Q1ACD7|TRIM5_NOMLE Tripartite motif-containing protein 5 OS=Nomascus leucogenys
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG------SNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K+ +CPVC++ Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDEGERSCPVCRISYQHK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 NIQPNRHVANIVEKLREVKLS 86
>sp|Q1ACD6|TRIM5_HYLSY Tripartite motif-containing protein 5 OS=Hylobates syndactylus
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG------SNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC AC+ + K+ +CPVC++ Y +
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDEGERSCPVCRISYQHK 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 NIQPNRHVANIVEKLREVKLS 86
>sp|Q5BN31|TRIM5_SAIBB Tripartite motif-containing protein 5 OS=Saimiri boliviensis
boliviensis GN=TRIM5 PE=2 SV=1
Length = 494
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG------SNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K +CP+C++PY
Sbjct: 6 LGSIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSE 65
Query: 62 EIRAAPHMDNLV 73
+R H+ ++V
Sbjct: 66 NLRPNRHLASIV 77
>sp|Q8IYM9|TRI22_HUMAN E3 ubiquitin-protein ligase TRIM22 OS=Homo sapiens GN=TRIM22 PE=1
SV=1
Length = 498
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 33/129 (25%)
Query: 13 RELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHRREIRA 65
+E+ CPICL LL+ +SL C H FC ACI +K S+CPVC+ + +R
Sbjct: 11 KEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRP 70
Query: 66 APHMDNLVSVYKSMEVA--------------SGINIFVTQDESSTKSSGDLICGEQVTGG 111
H+ N+V K ++++ + IF +D G +IC
Sbjct: 71 NRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKED-------GKVIC-----WV 118
Query: 112 CQDKVEHQG 120
C+ EHQG
Sbjct: 119 CELSQEHQG 127
>sp|Q864U1|BRCA1_BOVIN Breast cancer type 1 susceptibility protein homolog OS=Bos taurus
GN=BRCA1 PE=1 SV=1
Length = 1849
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM---KSGSNCPVCKVPYHRREI- 63
L M + L+CPICL L+ VS C+H+FC C++K + K S CP+CK +R +
Sbjct: 15 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 64 ---RAAPHMDNLVSVYKSMEVASGINI 87
R + ++ L+ + + E+ +G+
Sbjct: 75 ESTRFSQLVEELLKIIHAFELDTGLQF 101
>sp|Q5D7I0|TRIM5_SAISC Tripartite motif-containing protein 5 OS=Saimiri sciureus
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG------SNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K +CP+C++PY
Sbjct: 6 LGSIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSE 65
Query: 62 EIRAAPHMDNLV 73
+R H+ ++V
Sbjct: 66 NLRPNRHLASIV 77
>sp|Q5D7H8|TRIM5_CALDO Tripartite motif-containing protein 5 OS=Callicebus donacophilus
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K + +CP+C++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRISYPSE 65
Query: 62 EIRAAPHMDNLV----SVYKSMEVASGINIFVTQDESST---KSSGDLICGEQVTGGCQD 114
+R H+ N+V V S E +++ E + G++IC C+
Sbjct: 66 NLRPNRHLANIVERLREVVLSPEEGQKVDLCARHGEKLLLFCQQDGNVIC-----WLCER 120
Query: 115 KVEHQG 120
EH+G
Sbjct: 121 SQEHRG 126
>sp|P48754|BRCA1_MOUSE Breast cancer type 1 susceptibility protein homolog OS=Mus musculus
GN=Brca1 PE=1 SV=3
Length = 1812
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM---KSGSNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K S CP+CK +R ++
Sbjct: 15 LHAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQ 74
Query: 65 AAPHM----DNLVSVYKSMEVASGINI 87
+ + L+ + + E+ +G+ +
Sbjct: 75 GSTRFSQLAEELLRIMAAFELDTGMQL 101
>sp|O54952|BRCA1_RAT Breast cancer type 1 susceptibility protein homolog OS=Rattus
norvegicus GN=Brca1 PE=1 SV=1
Length = 1817
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM---KSGSNCPVCKVPYHRREIR 64
L M + L+CPICL L+ VS C+H+FC C++K + K S CP+CK +R ++
Sbjct: 15 LHAMQKILECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQ 74
Query: 65 AAPHMDNLVS----VYKSMEVASGI 85
+ LV + + E+ +G+
Sbjct: 75 GSARFSQLVEELLKIIDAFELDTGM 99
>sp|Q5D7I1|TRIM5_ATEGE Tripartite motif-containing protein 5 OS=Ateles geoffroyi
GN=TRIM5 PE=2 SV=1
Length = 547
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K + +CP+C+V Y
Sbjct: 6 LLNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRVSYQSE 65
Query: 62 EIRAAPHMDNL 72
+R H+ N+
Sbjct: 66 NLRPNRHLANI 76
>sp|Q95153|BRCA1_CANFA Breast cancer type 1 susceptibility protein homolog OS=Canis
familiaris GN=BRCA1 PE=3 SV=1
Length = 1878
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM---KSGSNCPVCKVPYHRREI- 63
L M + L+CPICL L+ VS C+H+FC C++K + K S CP+CK +R +
Sbjct: 15 LNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSLQ 74
Query: 64 ---RAAPHMDNLVSVYKSMEVASGINI 87
R + ++ L+ + + E+ +G+
Sbjct: 75 ESTRFSQLVEELLKIIHAFELDTGLQF 101
>sp|Q5D7J2|TRIM5_PAPAN Tripartite motif-containing protein 5 OS=Papio anubis GN=TRIM5
PE=3 SV=1
Length = 497
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y
Sbjct: 6 LLNVKEEVTCPICLELLTEPLSLPCGHSFCQACITANHRKSMLYKEGERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>sp|Q0PF16|TRIM5_MACMU Tripartite motif-containing protein 5 OS=Macaca mulatta GN=TRIM5
PE=1 SV=2
Length = 497
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y
Sbjct: 6 LLNVKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>sp|Q2YEN2|TRIM5_MACAS Tripartite motif-containing protein 5 OS=Macaca assamensis
GN=TRIM5 PE=3 SV=1
Length = 497
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y
Sbjct: 6 LLNVKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>sp|Q2YEN0|TRIM5_MACNE Tripartite motif-containing protein 5 OS=Macaca nemestrina
GN=TRIM5 PE=3 SV=1
Length = 495
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y
Sbjct: 6 LLNVKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>sp|Q587N6|TRIM5_MACFA Tripartite motif-containing protein 5 OS=Macaca fascicularis
GN=TRIM5 PE=2 SV=1
Length = 495
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGS-NCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM K G +CPVC++ Y
Sbjct: 6 LLNVKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSMLYKEGERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>sp|O00635|TRI38_HUMAN Tripartite motif-containing protein 38 OS=Homo sapiens GN=TRIM38
PE=1 SV=1
Length = 465
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 10 KMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGSN---------CPVCKVPYHR 60
KM E C ICLSL+++ VS+ C H +C+ CI K+ S CP C+ P+H
Sbjct: 9 KMMEEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHM 68
Query: 61 REIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGDLICGEQVTGGCQDKVEHQG 120
+R + +L+ K + Q + G LIC C+ +H+G
Sbjct: 69 DSLRPNKQLGSLIEALKETDQEMSCEEHGEQFHLFCEDEGQLICWR-----CERAPQHKG 123
>sp|Q5C8U3|TRIM5_CERTA Tripartite motif-containing protein 5 OS=Cercopithecus tantalus
GN=TRIM5 PE=2 SV=1
Length = 515
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI + K +CPVC++ Y
Sbjct: 6 LVNVKEEVTCPICLELLTEPLSLPCGHSFCQACITANHKESMLYKEEERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>sp|Q5D7I5|TRIM5_CALPY Tripartite motif-containing protein 5 OS=Callithrix pygmaea
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K + +CP+C++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRMSYPSE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
+R H+ N+V K + ++
Sbjct: 66 NLRPNRHLANIVERLKEVMLS 86
>sp|Q587N7|TRIM5_CHLAE Tripartite motif-containing protein 5 OS=Chlorocebus aethiops
GN=TRIM5 PE=2 SV=1
Length = 515
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI + K +CPVC++ Y
Sbjct: 6 LLNVKEEVTCPICLELLTEPLSLPCGHSFCQACITANHKESMLYKEEERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>sp|Q58DK8|TRI38_BOVIN Tripartite motif-containing protein 38 OS=Bos taurus GN=TRIM38 PE=2
SV=1
Length = 460
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 10 KMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS---------NCPVCKVPYHR 60
KM E C ICL L+++AVS++C H +C+ CIV ++ + +CP C+ P+
Sbjct: 5 KMREEATCSICLHLMTNAVSISCGHSYCHVCIVSFFENLNRMTPGLKTFSCPQCRAPFTM 64
Query: 61 REIRAAPHMDNLVSVYKSMEVASGINIFVTQDESSTKSSGD---LIC---GEQVTGGCQD 114
+R + NL+ V K M+ E S + G+ L C G+ + C
Sbjct: 65 ASLRPNKQLGNLIEVIKEMD-----------QEMSCEEHGEKLHLFCEDEGQLICWLCDR 113
Query: 115 KVEHQG 120
+H+G
Sbjct: 114 GAQHKG 119
>sp|Q5C8U1|TRIM5_SAGLB Tripartite motif-containing protein 5 OS=Saguinus labiatus
GN=TRIM5 PE=2 SV=1
Length = 494
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K + +CP+C++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESTPHQGERSCPLCRMSYPSE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
+R H+ N+V K + ++
Sbjct: 66 NLRPNRHLANIVERLKEVMLS 86
>sp|Q5D7I2|TRIM5_PITPI Tripartite motif-containing protein 5 OS=Pithecia pithecia
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM--KSGSNCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI KSM + +CP+C++ Y
Sbjct: 6 LMNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKKSMLHQGERSCPLCRISYPSE 65
Query: 62 EIRAAPHMDNLV 73
+R H+ N+V
Sbjct: 66 NLRPNRHLANIV 77
>sp|Q5D7H7|TRIM5_LAGLA Tripartite motif-containing protein 5 OS=Lagothrix lagotricha
GN=TRIM5 PE=3 SV=1
Length = 547
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI K + +CP+C+V Y
Sbjct: 6 LVNIKEEVTCPICLDLLTEPLSLDCGHSFCQACITADHKESTLHQGERSCPLCRVGYQSE 65
Query: 62 EIRAAPHMDNL 72
+R H+ N+
Sbjct: 66 NLRPNRHLANI 76
>sp|Q1ACD5|TRIM5_SAGOE Tripartite motif-containing protein 5 OS=Saguinus oedipus
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSGS------NCPVCKVPYHRR 61
L + E+ CPICL LL+ +SL C H FC ACI + K + +CP+C++ Y
Sbjct: 6 LVNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESTPHQGERSCPLCRMSYPSE 65
Query: 62 EIRAAPHMDNLVSVYKSMEVA 82
+R H+ N+V K + ++
Sbjct: 66 NLRPNRHLANIVERLKEVMLS 86
>sp|Q5D7I3|TRIM5_ERYPA Tripartite motif-containing protein 5 OS=Erythrocebus patas
GN=TRIM5 PE=2 SV=1
Length = 495
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV----KSM---KSGSNCPVCKVPYHR 60
L + E+ CPICL LL+ +SL C H FC ACI KSM + +CPVC++ Y
Sbjct: 6 LLNVKEEVTCPICLELLTEPLSLPCGHSFCQACITANHKKSMLYKEEERSCPVCRISYQP 65
Query: 61 REIRAAPHMDNLVSVYKSMEVA 82
I+ H+ N+V + ++++
Sbjct: 66 ENIQPNRHVANIVEKLREVKLS 87
>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo sapiens GN=MLL3 PE=1
SV=3
Length = 4911
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 624 QCSFCHSSENSEASGEMVHYYNGKPVSADYNGGSKIIHSHRNCTEWAPNVY-FEDDTVIN 682
+C FCH + G + ++ D + + H NC W+ VY + +IN
Sbjct: 4401 KCCFCHEEGDGLTDGP------ARLLNLDLD-----LWVHLNCALWSTEVYETQAGALIN 4449
Query: 683 LEAELARSRRIKCCCCGLKGAALGCYEKTCRKSFHVPCAKLILQCRWDTDNFVMLCPLHT 742
+E L R ++KC C GA GC+ C +H CA + QC + D MLCP+H
Sbjct: 4450 VELALRRGLQMKCVFCHKTGATSGCHRFRCTNIYHFTCA-IKAQCMFFKDK-TMLCPMHK 4507
Query: 743 SSNLPNENPGSQESRKKCISKKLLTQHNKV 772
+ QE + +++ Q ++V
Sbjct: 4508 PKGI-----HEQELSYFAVFRRVYVQRDEV 4532
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 662 SHRNCTEWAPNV-YFEDDTVINLEAELARSRRIKCCCCGLKGAALGCYEKTCRKSFHVPC 720
+H C EW+ V E+ ++N++ + +C C GA + C E+ C + +H PC
Sbjct: 251 AHHRCVEWSLGVCQMEEPLLVNVDKAVVSGSTERCAFCKHLGATIKCCEEKCTQMYHYPC 310
Query: 721 AKLILQCRWDTDNFVMLCPLH 741
A + D + +LCP H
Sbjct: 311 AAGAGTFQ-DFSHIFLLCPEH 330
>sp|Q62191|RO52_MOUSE E3 ubiquitin-protein ligase TRIM21 OS=Mus musculus GN=Trim21 PE=1
SV=1
Length = 470
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKS-GSNCPVCKVPYHRREIRAA 66
LEKM E+ C ICL + +S+ C H FC CI + K+ GS+CP C+ + R +R
Sbjct: 11 LEKMWEEVTCSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCPECRQQFLLRNLRPN 70
Query: 67 PHMDNLVSVYKSM 79
H+ N+V K +
Sbjct: 71 RHIANMVENLKQI 83
>sp|Q6AZZ1|TRI68_HUMAN E3 ubiquitin-protein ligase TRIM68 OS=Homo sapiens GN=TRIM68 PE=1
SV=1
Length = 485
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 3 DQRSHLEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIV-------KSMKSGSNCPVCK 55
D + +E + E+ CPIC++ L +S+ C H FC++C+ +S G CP+C+
Sbjct: 2 DPTALVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCR 61
Query: 56 VPYHRREIRAAPHMDNLVSVYKSMEVASGINI 87
P R +R + N+V + + + G+ +
Sbjct: 62 APVQPRNLRPNWQLANVVEKVRLLRLHPGMGL 93
>sp|Q6J6I9|BRCA1_MACMU Breast cancer type 1 susceptibility protein homolog OS=Macaca
mulatta GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 8 LEKMGRELKCPICLSLLSSAVSLTCNHVFCNACIVKSM---KSGSNCPVCKVPYHRREI- 63
+ M + L+CPICL L+ VS C+H+FC C++K + K S CP+CK +R +
Sbjct: 15 INAMQKILECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 64 ---RAAPHMDNLVSVYKSMEVASGINI 87
R + ++ L+ + + ++ +G+
Sbjct: 75 ESTRFSQLVEELLKIIHAFQLDTGLQF 101
>sp|Q8BGE7|TRIM6_MOUSE Tripartite motif-containing protein 6 OS=Mus musculus GN=Trim6 PE=2
SV=1
Length = 488
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 14 ELKCPICLSLLSSAVSLTCNHVFCNACIVKSMKSG-------SNCPVCKVPYHRREIRAA 66
E+ CPICL LL+ +S+ C H FC CI+ + + S+CPVC+ Y +R
Sbjct: 12 EVTCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFGQGGRSSCPVCRTSYQPGNLRPN 71
Query: 67 PHMDNLVSVYKSMEVASGINIFVT-------QDESSTKSSGDLICGEQVTGGCQDKVEHQ 119
H+ +V + + + G + V + + K G LIC C+ EH+
Sbjct: 72 RHLAAIVKRLREVALCPGKQLEVIFCALHGEKLQLFCKEDGKLIC-----WLCERSQEHR 126
Query: 120 G 120
G
Sbjct: 127 G 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 304,468,599
Number of Sequences: 539616
Number of extensions: 13230336
Number of successful extensions: 34067
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 502
Number of HSP's that attempted gapping in prelim test: 32136
Number of HSP's gapped (non-prelim): 1999
length of query: 811
length of database: 191,569,459
effective HSP length: 126
effective length of query: 685
effective length of database: 123,577,843
effective search space: 84650822455
effective search space used: 84650822455
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)