Query 003549
Match_columns 811
No_of_seqs 358 out of 3448
Neff 6.7
Searched_HMMs 29240
Date Tue Mar 26 17:29:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003549.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1600-1604//hhsearch_pdb/003549hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s28_A Sucrose synthase 1; gly 1.0 1 1 1546.6 65.3 805 2-809 4-808 (816)
2 2r60_A Glycosyl transferase, g 1.0 1 1 379.8 39.4 435 275-770 4-459 (499)
3 3vue_A GBSS-I, granule-bound s 1.0 1 1 358.4 31.9 438 277-771 8-512 (536)
4 3fro_A GLGA glycogen synthase; 1.0 1 1 355.6 38.4 401 278-770 2-430 (439)
5 3c48_A Predicted glycosyltrans 1.0 1 1 353.9 37.0 402 276-770 18-425 (438)
6 1rzu_A Glycogen synthase 1; gl 1.0 1 1 335.5 30.4 431 279-770 1-475 (485)
7 2qzs_A Glycogen synthase; glyc 1.0 1 1 332.4 33.7 428 279-770 1-476 (485)
8 3okp_A GDP-mannose-dependent a 1.0 1 1 329.5 35.5 369 277-770 3-379 (394)
9 2jjm_A Glycosyl transferase, g 1.0 1 1 323.4 36.7 359 299-770 24-385 (394)
10 2iw1_A Lipopolysaccharide core 1.0 1 1 321.2 18.5 367 279-770 1-371 (374)
No 1
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=1546.58 Aligned_cols=805 Identities=68% Similarity=1.153 Sum_probs=778.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCEEEE
Q ss_conf 98878877341787998886719999999999986698531314689999733069434455688957999853113445
Q 003549 2 AAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIV 81 (811)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 81 (811)
++++|+|++||+|++++++++||+++++||++|+++||++||+|||+++|+++|+ .+++++.+|+||++|++||||||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 81 (816)
T 3s28_A 4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPE--QTRKKLEGGPFFDLLKSTQEAIV 81 (816)
T ss_dssp -----------------------CTTHHHHHHHHHHHTCSEEEEHHHHHHTTTTT--SCGGGCCCSTHHHHHHTEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH--HHHCCCCCCCHHHHHHHHHHEEE
T ss_conf 5431114334888899899975999999999998629972029999999999998--62203346819999985241044
Q ss_pred CCCEEEEEECCCCCEEEEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 09828999857774089999841761044238677763200002665589860443055555678888889998751335
Q 003549 82 LPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQF 161 (811)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (811)
.|||||||||||||+|||+|||++||+||+|||+|||+|||+|||++.+++++||+||+|||++||++++|+||||||+|
T Consensus 82 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (816)
T 3s28_A 82 LPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDF 161 (816)
T ss_dssp CSSEEEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHHHHHHHSSCCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHH
T ss_pred CCCEEEEEECCCCCCEEEEEEEHHHCCEEEECHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 68727999828874259999873007114536999988689853887788870577645543579988986544574888
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 44642101268988860489998633249913121454578889999999999983279999993457998420267668
Q 003549 162 LNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKG 241 (811)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~e~g 241 (811)
||||||||||+|+++++|||+||++|+|+|++|||||||+|+.+||++|++|+++|+++|+||||++|+++||+||||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (816)
T 3s28_A 162 LNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERG 241 (816)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTCCSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 88887766548915557999999972349906410587679999999999999998549999988999999997288887
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
Q ss_conf 79828999999999998424999001878753799842589983565666545679988332300027778999999999
Q 003549 242 WGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLL 321 (811)
Q Consensus 242 wg~~~~r~~~~~~~l~~~~~~p~~~~le~f~~~~p~~~~Iviis~hg~~~~~~vlg~p~tGG~~vyvl~~~raLe~eLa~ 321 (811)
|||||+||+|||++|++++++|||+++|+|++|+||+|+|+++|+||||+|.+++|.||||||++||+|||||||++|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~ 321 (816)
T 3s28_A 242 WGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQ 321 (816)
T ss_dssp SCSBHHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
T ss_conf 68768999999999999851999630777736588524899984776657544578888898365099899899999999
Q ss_pred HHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99989994433305996667999888656530231586674999824756665321234646750009999999999999
Q 003549 322 RIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT 401 (811)
Q Consensus 322 ~L~~~G~~V~~~ilIiT~~~p~~~~~~~~~~~e~i~~~~~~~IlrvP~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~ 401 (811)
+|+++||+|+|+|+|+|+.+++..++.|.++.+.+.++++++|+|+|+++.++++++|++++.+|+|+..|+..+...+.
T Consensus 322 ~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il 401 (816)
T 3s28_A 322 RIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELS 401 (816)
T ss_dssp HHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99977996200168996898787777657751155486975999966877665433456577889999999999999999
Q ss_pred HHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
Q ss_conf 88199952999859991699999999749939999349864559997135743210111011333779997518999934
Q 003549 402 AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (811)
Q Consensus 402 ~~~~~kPDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~al~~AD~IIt~ 481 (811)
....++|||||+|++.+++++.++++++|+|+|+|.|+++..++..++.+|+.....|++++++.++..+++.||.|||+
T Consensus 402 ~~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~ 481 (816)
T 3s28_A 402 KELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITS 481 (816)
T ss_dssp HHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEES
T ss_pred HHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
T ss_conf 96589973999688538999999999759988999816630012223301556778888988888999999849999988
Q ss_pred CHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCC
Q ss_conf 98888410244554344434545541023216787899489925997788889971688988631011011106944320
Q 003549 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQND 561 (811)
Q Consensus 482 S~~~i~~~~~~vgqy~s~~~f~lp~ly~v~~gi~v~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~ 561 (811)
|.++++.+.+.+++|.++.+|++|++|++++|++++++|+.+||||+|.+.|.|......+...+++.++..++++.+.+
T Consensus 482 S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r 561 (816)
T 3s28_A 482 TFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK 561 (816)
T ss_dssp CHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBT
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 89999999988877644201354112210122446778879988974788728631035543200232000124605677
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 11388789999799998126766898899999998132599839999947479888753577999999999999849999
Q 003549 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG 641 (811)
Q Consensus 562 ~~~g~l~~~~k~iIl~iGRL~~~Kgi~~LieA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~ 641 (811)
+.+|++.++++++|+++||+++.||++.+++|++++.+.+++++|+|+|+|++ ..+.++++.++.++++++++++++.+
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~-~~~~~~e~~~~~~~L~~li~~lgL~~ 640 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRR-KESKDNEEKAEMKKMYDLIEEYKLNG 640 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTT-SCCCCHHHHHHHHHHHHHHHHTTCBB
T ss_pred HHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 77444578998399997447221799999999999785579969999968875-33343356999999999999749987
Q ss_pred CEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHH
Q ss_conf 39990355676883799999980065899668878888799999984997998488772000023870999899999999
Q 003549 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQA 721 (811)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~ia~aadifV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~l 721 (811)
+|+|+|++.+.++.+++++++++++|+||+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|++++++|++++
T Consensus 641 ~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~L 720 (816)
T 3s28_A 641 QFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQA 720 (816)
T ss_dssp BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHH
T ss_pred CEEECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCHHHH
T ss_conf 28981675566899999999995690999888755764999999980999999689876999706981899689999999
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999998750089999999999999999993999999999999999832358842888999866788887620233323
Q 003549 722 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVK 801 (811)
Q Consensus 722 A~aI~~~l~~l~~dp~~~~~ls~~ar~~v~e~yswe~~a~~ll~ly~~~~f~~~~~~~~~~~~~~y~~~~~~l~~~~~~~ 801 (811)
+++|.++++.+..|++.+++++++|++++.++|||+.++++++++|+.|+||+++++++|++++||+||||+|+|||||+
T Consensus 721 A~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g~wk~vs~~~r~~~~ryle~~~~l~~~~~~~ 800 (816)
T 3s28_A 721 ADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQ 800 (816)
T ss_dssp HHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999875269999999999999999986899999999999999976754213545388888999999986056775
Q ss_pred CCCCCCCC
Q ss_conf 35667668
Q 003549 802 SVPLASEN 809 (811)
Q Consensus 802 ~~~~~~~~ 809 (811)
++|+++|+
T Consensus 801 ~~~~~~~~ 808 (816)
T 3s28_A 801 AVPLAQDD 808 (816)
T ss_dssp HSCCCCC-
T ss_pred CCCCCCCH
T ss_conf 08876311
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=379.77 Aligned_cols=435 Identities=29% Similarity=0.498 Sum_probs=315.0
Q ss_pred CCCCCEEEEECCCCCCCCCC--CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCC
Q ss_conf 99842589983565666545--6799883323000277789999999999998999443330599666799988865653
Q 003549 275 LPMVFNVVILSPHGYFGQAN--VLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR 352 (811)
Q Consensus 275 ~p~~~~Iviis~hg~~~~~~--vlg~p~tGG~~vyvl~~~raLe~eLa~~L~~~G~~V~~~ilIiT~~~p~~~~~~~~~~ 352 (811)
+.+.|||++++++++|...+ +.+.+..||.+.++. +|++.|.++||+|+ |+|..........+...
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~ 71 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVK--------EVSLALAEMGVQVD----IITRRIKDENWPEFSGE 71 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCCBTTBGGGCCS
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHH--------HHHHHHHHCCCEEE----EEECCCCCCCCCCHHHH
T ss_conf 5445249999657774434423478888799433499--------99999985598489----99578872336511356
Q ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 02315866749998247566653212346467500099999999999998819995299985999169999999974993
Q 003549 353 LERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT 432 (811)
Q Consensus 353 ~e~i~~~~~~~IlrvP~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~lla~~~gvp 432 (811)
.+......++.++++|..... +..+..+|.++..+...+.+.+... ..+|||||+|.+..++.+.++++..++|
T Consensus 72 ~~~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~Divh~~~~~~~~~~~~~~~~~~~p 145 (499)
T 2r60_A 72 IDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYREE-GKFPQVVTTHYGDGGLAGVLLKNIKGLP 145 (499)
T ss_dssp EEECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHCCC
T ss_pred HHHCCCCCCEEEEEECCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 775067898179982577767-----7688999998999999999999853-8998889975786207999988735996
Q ss_pred EEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 99993498645599---971357432101110113337799975189999349888841024455434443454554102
Q 003549 433 QCTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYR 509 (811)
Q Consensus 433 ~v~t~H~l~~~k~~---~s~~~~k~~~~~y~f~~~~~~e~~al~~AD~IIt~S~~~i~~~~~~vgqy~s~~~f~lp~ly~ 509 (811)
+|.+.|+....... ........+...+.+......+..+++.+|.|+++|....+...+.. .|
T Consensus 146 ~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~-~~------------- 211 (499)
T 2r60_A 146 FTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHD-LY------------- 211 (499)
T ss_dssp EEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSG-GG-------------
T ss_pred EEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH-CC-------------
T ss_conf 8998068400111344147877612455678889999999998468999988889999998641-24-------------
Q ss_pred EECC-C-CC-CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCC-----CCCCCCCCEEEEEECC
Q ss_conf 3216-7-87-8994899259977888899716889886310110111069443201138-----8789999799998126
Q 003549 510 VVHG-I-DV-FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG-----TLSDRSKPIVFSMARL 581 (811)
Q Consensus 510 v~~g-i-~v-~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g-----~l~~~~k~iIl~iGRL 581 (811)
| + +. ...++.+||||+|.+.|.+......+. ..++.+| + +.++++|+++||+
T Consensus 212 ---g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~---------------~~r~~~~~~~~~~--~~~~~~i~~vGrl 271 (499)
T 2r60_A 212 ---RGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKA---------------KITKYLERDLGSE--RMELPAIIASSRL 271 (499)
T ss_dssp ---TTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHH---------------HHHHHHHHHSCGG--GTTSCEEEECSCC
T ss_pred ---CCCCCCCCCCCEEEECCCCCHHHCCCCCHHHHHH---------------HHHHHHCCCCCCC--CCCCCEEEEEECC
T ss_conf ---6422346788769987995866568641035678---------------9998836433456--8887689996068
Q ss_pred CCCCCHHHHHHHHHHHHCCCC-CEEEEEEECCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHH
Q ss_conf 766898899999998132599-8399999474798887---535779999999999998499993999035567688379
Q 003549 582 DHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKS---KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE 657 (811)
Q Consensus 582 ~~~Kgi~~LieA~~~l~~~~~-~v~LVIVG~g~~~~~~---~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~e 657 (811)
.+.||++.+++|+.++.+..+ .+.|+|+|++..+..+ .+.++.++.++++++++++++.++|.|+| .++..+
T Consensus 272 ~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G----~v~~~~ 347 (499)
T 2r60_A 272 DQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP----LNSQQE 347 (499)
T ss_dssp CGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE----CCSHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC----CCCHHH
T ss_conf 5015889999999999873888659999878887532211113201479999999998649986099878----899899
Q ss_pred HHHHHHCCC----CEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHC
Q ss_conf 999998006----5899668878888799999984997998488772000023870999899999999999999987500
Q 003549 658 LYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 733 (811)
Q Consensus 658 l~~~ia~aa----difV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~ 733 (811)
+..+++. + |++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++
T Consensus 348 ~~~~~~~-a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll---- 422 (499)
T 2r60_A 348 LAGCYAY-LASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF---- 422 (499)
T ss_dssp HHHHHHH-HHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHH----
T ss_pred HHHHHHH-CCCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHH----
T ss_conf 9999995-57679889978645897968999997699889816887788734786079958999999999999998----
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 8999999999999999999399999999999999983
Q 003549 734 ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 734 ~dp~~~~~ls~~ar~~v~e~yswe~~a~~ll~ly~~~ 770 (811)
+|++.++++++++++++.++|||+.++++++++|+..
T Consensus 423 ~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 459 (499)
T 2r60_A 423 ESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEI 459 (499)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 6999999999999999987579999999999999998
No 3
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=358.37 Aligned_cols=438 Identities=15% Similarity=0.166 Sum_probs=282.6
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 84258998356566654567998833230002777899999999999989994433305996667999888656530231
Q 003549 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (811)
Q Consensus 277 ~~~~Iviis~hg~~~~~~vlg~p~tGG~~vyvl~~~raLe~eLa~~L~~~G~~V~~~ilIiT~~~p~~~~~~~~~~~e~i 356 (811)
..|||+++|.-.+| .-.+||...++. .|.++|+++||+|. |+++.|+.-....-......+
T Consensus 8 ~~MkIl~vs~E~~P-------~~K~GGLadvv~--------~L~~aL~~~G~~V~----Vi~P~Y~~~~~~~~~~~~~~~ 68 (536)
T 3vue_A 8 HHMNVVFVGAEMAP-------WSKTGGLGDVLG--------GLPPAMAANGHRVM----VISPRYDQYKDAWDTSVVAEI 68 (536)
T ss_dssp CCCEEEEECSCBTT-------TBCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCSCCTTCEEEEEEEEE
T ss_pred CCCEEEEEEEECCC-------HHCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCHHHHHHCCCCEEEEE
T ss_conf 97389999872431-------212676999999--------99999997699699----990485022242265168999
Q ss_pred ---CCCCCEEEEEECCCCCCCC-CCC--CCCC------CCC--------H-HHHHHHH---HHHHHHHHHHC--------
Q ss_conf ---5866749998247566653-212--3464------675--------0-0099999---99999999881--------
Q 003549 357 ---SGTEHTHILRVPFRSEKGI-LRQ--WISR------FDV--------W-PYLETFT---EDVGSEITAEL-------- 404 (811)
Q Consensus 357 ---~~~~~~~IlrvP~~~~~~~-~~~--~isr------~~i--------~-p~l~~f~---~~~~~~i~~~~-------- 404 (811)
.....+++.+.+...-.-+ +.. +..+ ..+ | ...++|+ ..+. ++...+
T Consensus 69 ~~~~~~~~~~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l-~~~~~l~~~~~~~~ 147 (536)
T 3vue_A 69 KVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAAL-EAPRILNLNNNPYF 147 (536)
T ss_dssp EETTEEEEEEEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHH-HHHHHCCCCCCTTC
T ss_pred EECCCEEEEEEEEEEECCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHCCCCCHHH
T ss_conf 83683378999999978955999647554123346677866688756766417999999999999-99997302653011
Q ss_pred ---CCCCEEEEECCCCCHHHHHHHHHHC-------CCCEEEEECCCCCCCCC-CCHH--------HHHHHH-----HHHH
Q ss_conf ---9995299985999169999999974-------99399993498645599-9713--------574321-----0111
Q 003549 405 ---QGFPDFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYP-DSDI--------YWKKFD-----EKYH 460 (811)
Q Consensus 405 ---~~kPDIIh~h~~~~~lva~lla~~~-------gvp~v~t~H~l~~~k~~-~s~~--------~~k~~~-----~~y~ 460 (811)
...+||+|+|+|.+++++.++.... ++|.|+|+|++.....- .... .+...+ ....
T Consensus 148 ~~~~~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (536)
T 3vue_A 148 KGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPV 227 (536)
T ss_dssp CSCCCSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTT
T ss_pred HCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCCCCC
T ss_conf 01479987999776048999999998640233202563454215742245555333644189656401033331146410
Q ss_pred HHHHHHHHHHHHHHCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHH
Q ss_conf 01133377999751899993498888410244554344434545541023216787899489925997788889971688
Q 003549 461 FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540 (811)
Q Consensus 461 f~~~~~~e~~al~~AD~IIt~S~~~i~~~~~~vgqy~s~~~f~lp~ly~v~~gi~v~~~ki~VIpnGvD~~~f~p~~~~~ 540 (811)
+...+...+.++..||.|+|+|+...+......+.-. .+. ... ...++.+|+||||.+.|.|.++..
T Consensus 228 ~~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~-----~l~------~~~--~~~~i~~I~NGiD~~~~~p~~d~~ 294 (536)
T 3vue_A 228 EGRKINWMKAGILEADRVLTVSPYYAEELISGIARGC-----ELD------NIM--RLTGITGIVNGMDVSEWDPSKDKY 294 (536)
T ss_dssp CEEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCS-----SSC------CCS--CCCSCEECCCCCCTTTSCTTTCSS
T ss_pred CCCCHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCC-----CCC------CCC--CCCCEEEEECCCCHHHCCCCCCCC
T ss_conf 0330439999998536778768788534312634452-----200------125--457818997996642148877621
Q ss_pred HHHHH-HHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
Q ss_conf 98863-10110111069443201138878999979999812676689889999999813259983999994747988875
Q 003549 541 KRLTA-LHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (811)
Q Consensus 541 ~r~~~-~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~iGRL~~~Kgi~~LieA~~~l~~~~~~v~LVIVG~g~~~~~~~ 619 (811)
..... ....++.+...+...++.+|+..+++.|+|+++||+.+.||++.|++|+.++.+ ++.+|+++|.|..
T Consensus 295 ~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~--~~~~l~l~G~G~~----- 367 (536)
T 3vue_A 295 ITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ--EDVQIVLLGTGKK----- 367 (536)
T ss_dssp SSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT--SSCEEEEECCBCH-----
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH--HCCEEEEEECCCC-----
T ss_conf 001444345556567779999986199879997589999653023784789999997685--4985999954672-----
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC
Q ss_conf 35779999999999998499993999035567688379999998006589966887888879999998499799848877
Q 003549 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (811)
Q Consensus 620 d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadifV~PS~~E~fGltvlEAMa~GlPVIAT~~GG 699 (811)
.....++.....+ .+++.+.+ ..+..++..+++. +|+||+||++|+||++++|||+||+|||+|+.||
T Consensus 368 -----~~~~~~~~~~~~~--~~~v~~~~----~~~~~~~~~~~~~-aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG 435 (536)
T 3vue_A 368 -----KFEKLLKSMEEKY--PGKVRAVV----KFNAPLAHLIMAG-ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGG 435 (536)
T ss_dssp -----HHHHHHHHHHHHS--TTTEEEEC----SCCHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTH
T ss_pred -----HHHHHHHHHHHHC--CCCEEEEE----ECCHHHHHHHHHH-HHEEECCCCCCCCCHHHHHHHHCCCCEEECCCCC
T ss_conf -----6899999987616--88549997----1468889999986-2342534656898889999998699899907998
Q ss_pred CCCCCCCCCCEE----------EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 200002387099----------9899999999999999987500899999999999999999939999999999999998
Q 003549 700 PAEIIEHGASGF----------HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 700 ~~EiI~dg~~G~----------li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~e~yswe~~a~~ll~ly~~ 769 (811)
..|+|.||.+|+ +++|.|+++++++|.+++. +.+++ .|+++.+++. .++|||+..+++|+++|+.
T Consensus 436 ~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~-~~~~~-~~~~~~~~am---~~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 436 LVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK-VVGTP-AYEEMVRNCM---NQDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp HHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH-HTTSH-HHHHHHHHHH---HSCCSSHHHHHHHHHHHHT
T ss_pred CHHEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH-HCCCH-HHHHHHHHHH---HHCCCHHHHHHHHHHHHHH
T ss_conf 22202279876324667775158799999999999999998-52959-9999999987---7359999999999999998
Q ss_pred HH
Q ss_conf 32
Q 003549 770 YG 771 (811)
Q Consensus 770 ~~ 771 (811)
.+
T Consensus 511 L~ 512 (536)
T 3vue_A 511 LG 512 (536)
T ss_dssp TC
T ss_pred HH
T ss_conf 60
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=355.57 Aligned_cols=401 Identities=16% Similarity=0.171 Sum_probs=297.8
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCC---------
Q ss_conf 42589983565666545679988332300027778999999999999899944333059966679998886---------
Q 003549 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--------- 348 (811)
Q Consensus 278 ~~~Iviis~hg~~~~~~vlg~p~tGG~~vyvl~~~raLe~eLa~~L~~~G~~V~~~ilIiT~~~p~~~~~~--------- 348 (811)
+|||++++++.+| +..||.+.++. .|++.|+++||+|+ |+|...+......
T Consensus 2 ~MkIl~v~~~~~p--------~~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 2 HMKVLLLGFEFLP--------VKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CCEEEEECSCCTT--------SCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTCSCCEEEEEEEETTE
T ss_pred CEEEEEEECCCCC--------CCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCHHHHHCCCCCCCC
T ss_conf 5289999502177--------66688999999--------99999997798599----9836778823655246301476
Q ss_pred -CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHH-H-------HHHHHHHHHHHHHHHC--CCCCEEEEECCCC
Q ss_conf -565302315866749998247566653212346467500-0-------9999999999999881--9995299985999
Q 003549 349 -CNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP-Y-------LETFTEDVGSEITAEL--QGFPDFIIGNYSD 417 (811)
Q Consensus 349 -~~~~~e~i~~~~~~~IlrvP~~~~~~~~~~~isr~~i~p-~-------l~~f~~~~~~~i~~~~--~~kPDIIh~h~~~ 417 (811)
....... ....++.+.+++. .. ..+..++. + ...|...+.+.+.... ..+||+||+|++.
T Consensus 62 ~~~~~~~~-~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~ 132 (439)
T 3fro_A 62 EVQVKVSY-EERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWH 132 (439)
T ss_dssp EEEEEEEE-EEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGG
T ss_pred CCCEEEEE-CCCCCCEEEEECC-HH-------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHH
T ss_conf 53102431-2578840899353-22-------052124667763002325789999999999974447998199946403
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHCCCCCCCCC
Q ss_conf 16999999997499399993498645599971357432101110113337799975189999349888841024455434
Q 003549 418 GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYE 497 (811)
Q Consensus 418 ~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~al~~AD~IIt~S~~~i~~~~~~vgqy~ 497 (811)
.++.+.++++..++|+|.+.|+.....++............ .+......+..+++.+|.|+++|....+. ..+.
T Consensus 133 ~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ad~ii~~S~~~~~~---~~~~-- 206 (439)
T 3fro_A 133 TVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL-APYPDIDPEHTGGYIADIVTTVSRGYLID---EWGF-- 206 (439)
T ss_dssp GHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGG-CCSSEECHHHHHHHHCSEEEESCHHHHHH---THHH--
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCCCCCCC-CCCCEEEHHHHHHHHCCEEEECCHHHHHH---HHHH--
T ss_conf 43458988652699789996534445685677474551003-56663207666554345887268989999---8605--
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCC----HHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4434545541023216787899489925997788889971----688988631011011106944320113887899997
Q 003549 498 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYS----EKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKP 573 (811)
Q Consensus 498 s~~~f~lp~ly~v~~gi~v~~~ki~VIpnGvD~~~f~p~~----~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~ 573 (811)
++....++.+||||+|.+.|.|.. ....+ ...++.+|+ +++ +
T Consensus 207 ----------------~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~-~ 252 (439)
T 3fro_A 207 ----------------FRNFEGKITYVFNGIDCSFWNESYLTGSRDERK---------------KSLLSKFGM--DEG-V 252 (439)
T ss_dssp ----------------HGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHH---------------HHHHHHHTC--CSC-E
T ss_pred ----------------HHHCCCCEEECCCCCCCHHCCCCCCCCHHHHHH---------------HHHHHHCCC--CCC-C
T ss_conf ----------------650477345347888804308432211045669---------------999997399--998-4
Q ss_pred EEEEEECCC-CCCCHHHHHHHHHHHHCCC--CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 999981267-6689889999999813259--9839999947479888753577999999999999849999399903556
Q 003549 574 IVFSMARLD-HVKNMTGLVECYGKNSQLR--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (811)
Q Consensus 574 iIl~iGRL~-~~Kgi~~LieA~~~l~~~~--~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (811)
+|+++||+. +.||++.+++|+.++.+.. ++++|+|+|+|+. ...+.+++++++++ +.+.|.|
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~----------~~~~~l~~~~~~~~--~~~~~~g--- 317 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEKHG--NVKVITE--- 317 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCH----------HHHHHHHHHHHHCT--TEEEECS---
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCH----------HHHHHHHHHHHHCC--CEEEECC---
T ss_conf 79997333534366999999999998546678718999807972----------67789999875069--8999728---
Q ss_pred CCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 76883799999980065899668878888799999984997998488772000023870999899999999999999987
Q 003549 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (811)
Q Consensus 651 ~~v~~~el~~~ia~aadifV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~ 730 (811)
.++.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.+++
T Consensus 318 -~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll- 393 (439)
T 3fro_A 318 -MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL- 393 (439)
T ss_dssp -CCCHHHHHHHHTT-CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH-
T ss_pred -CCCHHHHHHHHHH-CCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEECC-CEEEECCCCHHHHHHHHHHHH-
T ss_conf -7998899999997-799995898788618999999779976973788743168758-448968899899999999998-
Q ss_pred HHCC-CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 5008-999999999999999999399999999999999983
Q 003549 731 KCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 731 ~l~~-dp~~~~~ls~~ar~~v~e~yswe~~a~~ll~ly~~~ 770 (811)
+ |++.++++++++++++ ++|||+.++++++++|+..
T Consensus 394 ---~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 394 ---ELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp ---HHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTC
T ss_pred ---HCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
T ss_conf ---319999999999999987-6472999999999999999
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=353.86 Aligned_cols=402 Identities=21% Similarity=0.319 Sum_probs=300.2
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 98425899835656665456799883323000277789999999999998999443330599666799988865653023
Q 003549 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 355 (811)
Q Consensus 276 p~~~~Iviis~hg~~~~~~vlg~p~tGG~~vyvl~~~raLe~eLa~~L~~~G~~V~~~ilIiT~~~p~~~~~~~~~~~e~ 355 (811)
..+|||++++.+++|.. ..+.+..||.+.++. +|++.|.++||+|+ |+|....... . ....
T Consensus 18 ~~mmkIl~i~~~~~p~~--~~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~----~-~~~~ 78 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQ--QPGTGDSGGMNVYIL--------STATELAKQGIEVD----IYTRATRPSQ----G-EIVR 78 (438)
T ss_dssp -CCCEEEEECTTSCTTC--C-------CHHHHHH--------HHHHHHHHTTCEEE----EEEECCCGGG----C-SEEE
T ss_pred CCHHEEEEEEEECCCCC--CCCCCCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCC----C-CCCC
T ss_conf 00203345775325634--678788787999999--------99999996699799----9954788777----5-4002
Q ss_pred ECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 15866749998247566653212346467500099999999999998819995299985999169999999974993999
Q 003549 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (811)
Q Consensus 356 i~~~~~~~IlrvP~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~lla~~~gvp~v~ 435 (811)
. ..++.+.+++...... .++..++.++..|...+.+..... ..+||+||+|++..++++.++++..++|++.
T Consensus 79 ~--~~~v~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~ 150 (438)
T 3c48_A 79 V--AENLRVINIAAGPYEG-----LSKEELPTQLAAFTGGMLSFTRRE-KVTYDLIHSHYWLSGQVGWLLRDLWRIPLIH 150 (438)
T ss_dssp E--ETTEEEEEECCSCSSS-----CCGGGGGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHTCCEEE
T ss_pred C--CCCEEEEEECCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEECCCCHHHHHHHHHHHCCCCEEE
T ss_conf 5--6874899924787543-----236677899999999999999841-6899989947755789999999974999899
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 93498645599971357432101110113337799975189999349888841024455434443454554102321678
Q 003549 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (811)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~al~~AD~IIt~S~~~i~~~~~~vgqy~s~~~f~lp~ly~v~~gi~ 515 (811)
+.|+............ . ..........+...++.+|.|+++|....+...+. .|+.
T Consensus 151 ~~h~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~g~~ 206 (438)
T 3c48_A 151 TAHTLAAVKNSYRDDS----D-TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHH-------------------YDAD 206 (438)
T ss_dssp ECSSCHHHHSCC--------C-CHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHH-------------------HCCC
T ss_pred EECCCCCCCCCCCCCC----C-CCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH-------------------HCCC
T ss_conf 9427740111110026----7-73157899999999840899998479999999998-------------------5898
Q ss_pred CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 78994899259977888899716889886310110111069443201138878999979999812676689889999999
Q 003549 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (811)
Q Consensus 516 v~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~iGRL~~~Kgi~~LieA~~ 595 (811)
..++.+||||+|.+.|.+....... ..++.+++ +.++++|+++||+.+.||++.+++|+.
T Consensus 207 --~~k~~vi~ngvd~~~~~~~~~~~~~----------------~~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~ 266 (438)
T 3c48_A 207 --PDRISVVSPGADVELYSPGNDRATE----------------RSRRELGI--PLHTKVVAFVGRLQPFKGPQVLIKAVA 266 (438)
T ss_dssp --GGGEEECCCCCCTTTSCCC----CH----------------HHHHHTTC--CSSSEEEEEESCBSGGGCHHHHHHHHH
T ss_pred --HHHEEEECCCCCCCCCCCCCCCHHH----------------HHHHHCCC--CCCCCEEEEEEEECCCCCHHHHHHHHH
T ss_conf --2026882697661104786620245----------------66886089--989848999743156679899999999
Q ss_pred HHHCCCC--CEEEEEEEC----CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 8132599--839999947----4798887535779999999999998499993999035567688379999998006589
Q 003549 596 KNSQLRE--LVNLVVVAG----YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAF 669 (811)
Q Consensus 596 ~l~~~~~--~v~LVIVG~----g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadif 669 (811)
.+.+..+ +++|+|+|+ |+. .+.++++++++++.++|.|+| .++..++..+++. +|++
T Consensus 267 ~l~~~~p~~~~~l~i~G~~~~~g~~------------~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~~~~-adv~ 329 (438)
T 3c48_A 267 ALFDRDPDRNLRVIICGGPSGPNAT------------PDTYRHMAEELGVEKRIRFLD----PRPPSELVAVYRA-ADIV 329 (438)
T ss_dssp HHHHHCTTCSEEEEEECCBC------------------CHHHHHHHHTTCTTTEEEEC----CCCHHHHHHHHHH-CSEE
T ss_pred HHHHHCCCCCEEEEEEECCCCCCCH------------HHHHHHHHHHCCCCCCEEECC----CCCHHHHHHHHHH-CCEE
T ss_conf 9996397766699998188877727------------899999999719878689858----8985889999985-8999
Q ss_pred EECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 96688788887999999849979984887720000238709998999999999999999875008999999999999999
Q 003549 670 VQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (811)
Q Consensus 670 V~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~ 749 (811)
|.||.+|+||++++|||+||+|||+++.||..|++.++.+|++++++|+++++++|.+++ +|++.+++++++++++
T Consensus 330 v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~ 405 (438)
T 3c48_A 330 AVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLL----DDDETRIRMGEDAVEH 405 (438)
T ss_dssp EECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHHH
T ss_conf 987402687559999987699889627987257750797279879999999999999997----5989999999999999
Q ss_pred HHHHCCHHHHHHHHHHHHHHH
Q ss_conf 999399999999999999983
Q 003549 750 IYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 750 v~e~yswe~~a~~ll~ly~~~ 770 (811)
+.+ |+|+.++++++++|+..
T Consensus 406 ~~~-~s~~~~~~~~~~~~~~~ 425 (438)
T 3c48_A 406 ART-FSWAATAAQLSSLYNDA 425 (438)
T ss_dssp HHH-HHHHHHHHHHHHHHHHH
T ss_pred HHH-CCHHHHHHHHHHHHHHH
T ss_conf 885-79999999999999998
No 6
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=335.54 Aligned_cols=431 Identities=16% Similarity=0.171 Sum_probs=279.0
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCC-------
Q ss_conf 2589983565666545679988332300027778999999999999899944333059966679998886565-------
Q 003549 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ------- 351 (811)
Q Consensus 279 ~~Iviis~hg~~~~~~vlg~p~tGG~~vyvl~~~raLe~eLa~~L~~~G~~V~~~ilIiT~~~p~~~~~~~~~------- 351 (811)
|||++++.+.+|. +..||.+.++. +|++.|+++||+|+ |+|...+.... .+.+
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~-~~~~~~~~~~~ 60 (485)
T 1rzu_A 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKA-AVTDPVKCFEF 60 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHH-HCCSCEEEEEE
T ss_pred CEEEEEEEEECCC-------CCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCCC-CCCCCCEEEEE
T ss_conf 9699994465156-------56654999999--------99999997698699----99156443344-43565136899
Q ss_pred ------CEEEE-CCCCCEEEEEECCCCCCCCCCC--CCCC--CCCHH-H---HHHHHHHHHHHHHHHC--CCCCEEEEEC
Q ss_conf ------30231-5866749998247566653212--3464--67500-0---9999999999999881--9995299985
Q 003549 352 ------RLERV-SGTEHTHILRVPFRSEKGILRQ--WISR--FDVWP-Y---LETFTEDVGSEITAEL--QGFPDFIIGN 414 (811)
Q Consensus 352 ------~~e~i-~~~~~~~IlrvP~~~~~~~~~~--~isr--~~i~p-~---l~~f~~~~~~~i~~~~--~~kPDIIh~h 414 (811)
..... ....++.+.+++...... +. .... ..-|+ . ...|...+. .+.... ..+|||||+|
T Consensus 61 ~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~DiIh~~ 137 (485)
T 1rzu_A 61 TDLLGEKADLLEVQHERLDLLILDAPAYYE--RSGGPYLGQTGKDYPDNWKRFAALSLAAA-RIGAGVLPGWRPDMVHAH 137 (485)
T ss_dssp SCSSSCCEEEEEEEETTEEEEEEECHHHHC--SSSCSSBCTTSSBCTTHHHHHHHHHHHHH-HHHTTCSSSCCCSEEEEE
T ss_pred EEECCCEEEEEEEEECCCEEEEEECHHHHC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHHHHCCCCCCCEEEEC
T ss_conf 983087478999996695699984867727--77665588656665306799999999999-999986157999889964
Q ss_pred CCCCHHHHHHHHHH--CCCCEEEEECCCCCCCC-CCCHHHH-----HHHH-HHHHHHHHHHHHHHHHHHCCEEEECCHHH
Q ss_conf 99916999999997--49939999349864559-9971357-----4321-01110113337799975189999349888
Q 003549 415 YSDGNLVASLLAYK--MGITQCTIAHALEKTKY-PDSDIYW-----KKFD-EKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 415 ~~~~~lva~lla~~--~gvp~v~t~H~l~~~k~-~~s~~~~-----k~~~-~~y~f~~~~~~e~~al~~AD~IIt~S~~~ 485 (811)
.+..++++.++++. .++|+|.+.|+.+.... ....... ..+. ....+......+..+++.+|.|+++|...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 217 (485)
T 1rzu_A 138 DWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSY 217 (485)
T ss_dssp HHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHH
T ss_pred CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHH
T ss_conf 63055789997310358997899966754468788778734399803202000132562359998886467799608758
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCC
Q ss_conf 84102445543444345455410232167878994899259977888899716889886310110111069443201138
Q 003549 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (811)
Q Consensus 486 i~~~~~~vgqy~s~~~f~lp~ly~v~~gi~v~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 565 (811)
.+...+.. |. +.++.+ ++....++.+||||+|.+.|.|...............+.........++.+|
T Consensus 218 ~~~~~~~~--~g----~~~~~~------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 285 (485)
T 1rzu_A 218 AEEILTAE--FG----MGLEGV------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR 285 (485)
T ss_dssp HHHTTSHH--HH----TTCHHH------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT
T ss_pred HHHHHCCC--CC----CCHHHH------HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99983543--57----665899------9860688169708986020588665110001243244567886999999629
Q ss_pred CCCCCC-CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 878999-9799998126766898899999998132599839999947479888753577999999999999849999399
Q 003549 566 TLSDRS-KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (811)
Q Consensus 566 ~l~~~~-k~iIl~iGRL~~~Kgi~~LieA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (811)
+ +.+ +++|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. ...+.+++++++++ ++|.
T Consensus 286 ~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~--~~v~ 349 (485)
T 1rzu_A 286 I--DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGDV----------ALEGALLAAASRHH--GRVG 349 (485)
T ss_dssp C--CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBCH----------HHHHHHHHHHHHTT--TTEE
T ss_pred C--CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--CCCEEEEEECCCH----------HHHHHHHHHHHHCC--CCEE
T ss_conf 8--88998399997257531287999999999872--6956999968946----------89999999998678--8689
Q ss_pred -EECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCC---------CCEEEEC
Q ss_conf -903556768837999999800658996688788887999999849979984887720000238---------7099989
Q 003549 645 -WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHID 714 (811)
Q Consensus 645 -flG~~~~~v~~~el~~~ia~aadifV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg---------~~G~li~ 714 (811)
|.| . +.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|++++
T Consensus 350 ~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~ 423 (485)
T 1rzu_A 350 VAIG----Y-NEPLSHLMQAG-CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFS 423 (485)
T ss_dssp EEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEES
T ss_pred EECC----C-CHHHHHHHHHC-CCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHEECCCCCCCCCCCCCCCEEEC
T ss_conf 9438----9-97999999852-9999978446887779999997799779808998311321565332345677634867
Q ss_pred CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999875008999999999999999999399999999999999983
Q 003549 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 715 p~D~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~e~yswe~~a~~ll~ly~~~ 770 (811)
++|+++++++|.+++. +..|++.++++++++++ ++|||+.++++++++|+..
T Consensus 424 ~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 424 PVTLDGLKQAIRRTVR-YYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp SCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHH
T ss_conf 8999999999999998-72799999999999998---8689699999999999986
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=332.36 Aligned_cols=428 Identities=15% Similarity=0.145 Sum_probs=279.1
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCC----------
Q ss_conf 2589983565666545679988332300027778999999999999899944333059966679998886----------
Q 003549 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT---------- 348 (811)
Q Consensus 279 ~~Iviis~hg~~~~~~vlg~p~tGG~~vyvl~~~raLe~eLa~~L~~~G~~V~~~ilIiT~~~p~~~~~~---------- 348 (811)
|||++++...+|. +..||.+.++. .|++.|+++||+|+ |+|...+......
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 2qzs_A 1 MQVLHVCSEMFPL-------LKTGGLADVIG--------ALPAAQIADGVDAR----VLLPAFPDIRRGVTDAQVVSRRD 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCHHHHHHCTTCEEEEEEC
T ss_pred CEEEEEEEECCCC-------CCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCCCCCCCCEEEEEEC
T ss_conf 9699996410466-------56773999999--------99999997498789----99447643454345640578741
Q ss_pred -CCCCEEEE-CCCCCEEEEEECCCCC---CC-CCCCCCCCCCCHH----HHHHHHHHHHHHHHHHCC--CCCEEEEECCC
Q ss_conf -56530231-5866749998247566---65-3212346467500----099999999999998819--99529998599
Q 003549 349 -CNQRLERV-SGTEHTHILRVPFRSE---KG-ILRQWISRFDVWP----YLETFTEDVGSEITAELQ--GFPDFIIGNYS 416 (811)
Q Consensus 349 -~~~~~e~i-~~~~~~~IlrvP~~~~---~~-~~~~~isr~~i~p----~l~~f~~~~~~~i~~~~~--~kPDIIh~h~~ 416 (811)
.+...+.. ....++.+.+++.... .+ .+.. .. ..-|+ ....+...+. .+..... .+|||||+|.+
T Consensus 62 ~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Divh~~~~ 138 (485)
T 2qzs_A 62 TFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHD-TN-LFAYTDNVLRFALLGWVGA-EMASGLDPFWRPDVVHAHDW 138 (485)
T ss_dssp CTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBC-TT-SCBCTTHHHHHHHHHHHHH-HHTTTSSTTCCCSEEEEETG
T ss_pred CCCCCEEEEEEEECCCEEEEEECHHHCCCCCCCCCC-CC-CCCCCCHHHHHHHHHHHHH-HHHHHHCCCCCCCEEEEECC
T ss_conf 568717999998789479997082650689876677-54-5778735899999999999-99998456789978996062
Q ss_pred CCHHHHHHHH-HHCCCCEEEEECCCCCCCCCCCH-HHHHHHHH------HHHHHHHHHHHHHHHHHCCEEEECCHHHHHH
Q ss_conf 9169999999-97499399993498645599971-35743210------1110113337799975189999349888841
Q 003549 417 DGNLVASLLA-YKMGITQCTIAHALEKTKYPDSD-IYWKKFDE------KYHFSCQFTADLIAMNNADFIITSTYQEIAG 488 (811)
Q Consensus 417 ~~~lva~lla-~~~gvp~v~t~H~l~~~k~~~s~-~~~k~~~~------~y~f~~~~~~e~~al~~AD~IIt~S~~~i~~ 488 (811)
..++++.+++ +..++|+|.+.|+.......... .....+.. ...+......+..+++.+|.|+++|....+.
T Consensus 139 ~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 218 (485)
T 2qzs_A 139 HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE 218 (485)
T ss_dssp GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHHH
T ss_conf 13378999754368997899946841357889888876499913213111232465469999987538688568899999
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCC------CC--CCEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCC
Q ss_conf 0244554344434545541023216787------89--948992599778888997168898863101101110694432
Q 003549 489 TKNTVGQYESHTAFTLPGLYRVVHGIDV------FD--PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (811)
Q Consensus 489 ~~~~vgqy~s~~~f~lp~ly~v~~gi~v------~~--~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 560 (811)
..+. ..|+++ .. .++.+||||+|.+.|.|..........-....+.........
T Consensus 219 ~~~~------------------~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 2qzs_A 219 ITEP------------------QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQL 280 (485)
T ss_dssp TTSH------------------HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHH
T ss_pred HHCC------------------CCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 8540------------------1472468999850667866997469876645864442221236630065778849999
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 01138878999979999812676689889999999813259983999994747988875357799999999999984999
Q 003549 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (811)
Q Consensus 561 ~~~~g~l~~~~k~iIl~iGRL~~~Kgi~~LieA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (811)
++.+|+..+.++++|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. ...+.+++++++++
T Consensus 281 r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~-- 346 (485)
T 2qzs_A 281 QIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGDP----------VLQEGFLAAAAEYP-- 346 (485)
T ss_dssp HHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEECH----------HHHHHHHHHHHHST--
T ss_pred HHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--CCCEEEEEECCCH----------HHHHHHHHHHHHCC--
T ss_conf 987198889997399996667543587999999999862--7948999928956----------78999999997579--
Q ss_pred CCEE-EECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCC---------CCE
Q ss_conf 9399-903556768837999999800658996688788887999999849979984887720000238---------709
Q 003549 641 GQFR-WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASG 710 (811)
Q Consensus 641 ~~V~-flG~~~~~v~~~el~~~ia~aadifV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg---------~~G 710 (811)
++|. |.| . +.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|
T Consensus 347 ~~v~~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G 420 (485)
T 2qzs_A 347 GQVGVQIG----Y-HEAFSHRIMGG-ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASG 420 (485)
T ss_dssp TTEEEEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCB
T ss_pred CCEEEECC----C-CHHHHHHHHHH-CCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCE
T ss_conf 93899478----9-97999999975-889997885678767999999779977987899832552157644344466645
Q ss_pred EEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 998999999999999999875008999999999999999999399999999999999983
Q 003549 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 711 ~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~e~yswe~~a~~ll~ly~~~ 770 (811)
++++++|+++++++|.+++. +..|++.++++++++++ ++|||+.++++++++|+..
T Consensus 421 ~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 421 FVFEDSNAWSLLRAIRRAFV-LWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp EEECSSSHHHHHHHHHHHHH-HHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHH
T ss_conf 99778999999999999998-70899999999999876---3289899999999999986
No 8
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=1.00 E-value=1 Score=329.51 Aligned_cols=369 Identities=17% Similarity=0.259 Sum_probs=281.8
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 84258998356566654567998833230002777899999999999989994433305996667999888656530231
Q 003549 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (811)
Q Consensus 277 ~~~~Iviis~hg~~~~~~vlg~p~tGG~~vyvl~~~raLe~eLa~~L~~~G~~V~~~ilIiT~~~p~~~~~~~~~~~e~i 356 (811)
+.|||+++++... |..||.+.++. .|++.| +||+|+ |+|...+... ....
T Consensus 3 ~~mkIl~v~~~~~---------p~~gG~~~~~~--------~l~~~L--~g~~v~----v~~~~~~~~~-------~~~~ 52 (394)
T 3okp_A 3 ASRKTLVVTNDFP---------PRIGGIQSYLR--------DFIATQ--DPESIV----VFASTQNAEE-------AHAY 52 (394)
T ss_dssp -CCCEEEEESCCT---------TSCSHHHHHHH--------HHHTTS--CGGGEE----EEEECSSHHH-------HHHH
T ss_pred CCCEEEEEECCCC---------CCCCHHHHHHH--------HHHHHH--CCCEEE----EEECCCCCCC-------HHHH
T ss_conf 8866999927668---------86551999999--------999985--697689----9977888642-------4443
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC-EEE
Q ss_conf 5866749998247566653212346467500099999999999998819995299985999169999999974993-999
Q 003549 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT-QCT 435 (811)
Q Consensus 357 ~~~~~~~IlrvP~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~lla~~~gvp-~v~ 435 (811)
....++.+.+++..... ..+ .+...+.+.+.. .+||+||+|..........++++.++| ++.
T Consensus 53 ~~~~~~~~~~~~~~~~~----------~~~----~~~~~l~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 53 DKTLDYEVIRWPRSVML----------PTP----TTAHAMAEIIRE---REIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp HTTCSSEEEEESSSSCC----------SCH----HHHHHHHHHHHH---TTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred CCCCCEEEEECCCCCCC----------CCH----HHHHHHHHHHHH---CCCCEEEECCCCHHHHHHHHHHHCCCCCEEE
T ss_conf 34566289984565455----------551----469999999876---3898899888544889999997518981999
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 93498645599971357432101110113337799975189999349888841024455434443454554102321678
Q 003549 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (811)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~al~~AD~IIt~S~~~i~~~~~~vgqy~s~~~f~lp~ly~v~~gi~ 515 (811)
+.|+... .|... ..++ ......++.+|.++++|....+...+. .+
T Consensus 116 ~~h~~~~--------~~~~~-~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~-- 160 (394)
T 3okp_A 116 STHGHEV--------GWSML-PGSR-----QSLRKIGTEVDVLTYISQYTLRRFKSA-------------------FG-- 160 (394)
T ss_dssp ECCSTHH--------HHTTS-HHHH-----HHHHHHHHHCSEEEESCHHHHHHHHHH-------------------HC--
T ss_pred EECCCHH--------HHHHC-CHHH-----HHHHHHHHHCCEEEECCHHHHHHHHHH-------------------CC--
T ss_conf 9346423--------33212-2034-----899999986797997688999999984-------------------18--
Q ss_pred CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 78994899259977888899716889886310110111069443201138878999979999812676689889999999
Q 003549 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (811)
Q Consensus 516 v~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~iGRL~~~Kgi~~LieA~~ 595 (811)
...++.+||||+|.+.|.|.....+.. .++.+|+ +.++++|+++||+.+.||++.+++|+.
T Consensus 161 -~~~~~~vi~ngv~~~~~~~~~~~~~~~----------------~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 161 -SHPTFEHLPSGVDVKRFTPATPEDKSA----------------TRKKLGF--TDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp -SSSEEEECCCCBCTTTSCCCCHHHHHH----------------HHHHTTC--CTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred -CCCCEEEECCCCCHHHCCCCCCHHHHH----------------HHHHCCC--CCCCEEEEEEECCCCCCCHHHHHHHHH
T ss_conf -999858836985888758877214689----------------9986499--857669999764413458879999999
Q ss_pred HHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCC
Q ss_conf 81325998399999474798887535779999999999998499993999035567688379999998006589966887
Q 003549 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (811)
Q Consensus 596 ~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadifV~PS~~ 675 (811)
++.+..++++|+|+|+|+. .+.+++++ .++.++|.|+| .++.+++..+++. +|++|.||.+
T Consensus 222 ~l~~~~~~~~l~i~G~g~~------------~~~l~~~~--~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~ps~~ 282 (394)
T 3okp_A 222 QVIAARPDAQLLIVGSGRY------------ESTLRRLA--TDVSQNVKFLG----RLEYQDMINTLAA-ADIFAMPART 282 (394)
T ss_dssp HHHHHSTTCEEEEECCCTT------------HHHHHHHT--GGGGGGEEEEE----SCCHHHHHHHHHH-CSEEEECCCC
T ss_pred HHHHHCCCEEEEEECCCHH------------HHHHHHHH--HCCCCEEEECC----CCCHHHHHHHHHH-CCEEEECCCC
T ss_conf 9886189869999868647------------99999987--55457299907----8997899999986-8999945755
Q ss_pred -------CCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf -------8888799999984997998488772000023870999899999999999999987500899999999999999
Q 003549 676 -------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (811)
Q Consensus 676 -------E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~ 748 (811)
|+||++++|||+||+|||+++.||..|++.++ +|++++++|+++++++|.+++ +|++.++++++++++
T Consensus 283 ~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~ 357 (394)
T 3okp_A 283 RGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELL----DDPIRRAAMGAAGRA 357 (394)
T ss_dssp BGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHH----TCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHCC-CCEEECCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHH
T ss_conf 566656555673999999759979993899737787468-856728999999999999998----199999999999999
Q ss_pred HHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 9999399999999999999983
Q 003549 749 RIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 749 ~v~e~yswe~~a~~ll~ly~~~ 770 (811)
++.++|||+.++++++++|+..
T Consensus 358 ~~~~~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 358 HVEAEWSWEIMGERLTNILQSE 379 (394)
T ss_dssp HHHHHTBHHHHHHHHHHHHHSC
T ss_pred HHHHHCCHHHHHHHHHHHHHHH
T ss_conf 9987479999999999999972
No 9
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=1.00 E-value=1 Score=323.41 Aligned_cols=359 Identities=18% Similarity=0.260 Sum_probs=268.2
Q ss_pred CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf 88332300027778999999999999899944333059966679998886565302315866749998247566653212
Q 003549 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 378 (811)
Q Consensus 299 p~tGG~~vyvl~~~raLe~eLa~~L~~~G~~V~~~ilIiT~~~p~~~~~~~~~~~e~i~~~~~~~IlrvP~~~~~~~~~~ 378 (811)
|..||.+.++. +|++.|+++||+|+ ++|...+.... ....++.+..++.....
T Consensus 24 p~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~----------~~~~~i~~~~~~~~~~~----- 76 (394)
T 2jjm_A 24 PSVGGSGVVGT--------ELGKQLAERGHEIH----FITSGLPFRLN----------KVYPNIYFHEVTVNQYS----- 76 (394)
T ss_dssp C--CHHHHHHH--------HHHHHHHHTTCEEE----EECSSCC--------------CCCTTEEEECCCCC--------
T ss_pred CCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCCC----------CCCCCEEEEECCCCCCC-----
T ss_conf 89898789999--------99999996898799----99688877620----------03786289852566654-----
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHH-HHHHHHHHC--CCCEEEEECCCCCCCCCCCHHHHHHH
Q ss_conf 346467500099999999999998819995299985999169-999999974--99399993498645599971357432
Q 003549 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL-VASLLAYKM--GITQCTIAHALEKTKYPDSDIYWKKF 455 (811)
Q Consensus 379 ~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~l-va~lla~~~--gvp~v~t~H~l~~~k~~~s~~~~k~~ 455 (811)
.+...++...+...+.+.+... +||+||+|+..+.. .+.++++.. ++|++.+.|+........
T Consensus 77 ---~~~~~~~~~~~~~~l~~~l~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-------- 142 (394)
T 2jjm_A 77 ---VFQYPPYDLALASKMAEVAQRE---NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS-------- 142 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHHH---TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT--------
T ss_pred ---CCCCCCCCHHHHHHHHHHHHHC---CCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC--------
T ss_conf ---0015652079999999999776---99999972433777889998886267877799971575212588--------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 10111011333779997518999934988884102445543444345455410232167878994899259977888899
Q 003549 456 DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 535 (811)
Q Consensus 456 ~~~y~f~~~~~~e~~al~~AD~IIt~S~~~i~~~~~~vgqy~s~~~f~lp~ly~v~~gi~v~~~ki~VIpnGvD~~~f~p 535 (811)
...+. ......++.+|.++++|....+...+. .+. ..++.+||||+|.+.|.+
T Consensus 143 ~~~~~-----~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~---~~~~~vi~ngv~~~~~~~ 195 (394)
T 2jjm_A 143 DPSLN-----NLIRFGIEQSDVVTAVSHSLINETHEL-------------------VKP---NKDIQTVYNFIDERVYFK 195 (394)
T ss_dssp CTTTH-----HHHHHHHHHSSEEEESCHHHHHHHHHH-------------------TCC---SSCEEECCCCCCTTTCCC
T ss_pred CHHHH-----HHHHHHHHHCCEEEECCHHHHHHHHHH-------------------HCC---CCCEEEECCCCCHHHCCC
T ss_conf 87788-----999999861998999799999999985-------------------287---656799558756876088
Q ss_pred CCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC
Q ss_conf 71688988631011011106944320113887899997999981267668988999999981325998399999474798
Q 003549 536 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDV 615 (811)
Q Consensus 536 ~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~iGRL~~~Kgi~~LieA~~~l~~~~~~v~LVIVG~g~~~ 615 (811)
......+ ..+++ ++++++|+++||+.+.||++.+++|+..+.+. .+++|+++|+|+.
T Consensus 196 ~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~- 252 (394)
T 2jjm_A 196 RDMTQLK-------------------KEYGI--SESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE- 252 (394)
T ss_dssp CCCHHHH-------------------HHTTC--C---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT-
T ss_pred CCHHHHH-------------------HHCCC--CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCEEEEECCCHH-
T ss_conf 6348899-------------------87199--98880899950466535889999999999853-7978999889657-
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEC
Q ss_conf 88753577999999999999849999399903556768837999999800658996688788887999999849979984
Q 003549 616 NKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 616 ~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadifV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
.+.++++++++++.++|.|+|+ ..++..+++. +|++|+||.+|+||++++|||+||+|||++
T Consensus 253 -----------~~~l~~~~~~~~l~~~v~~~g~------~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~PvI~~ 314 (394)
T 2jjm_A 253 -----------FCTILQLVKNLHIEDRVLFLGK------QDNVAELLAM-SDLMLLLSEKESFGLVLLEAMACGVPCIGT 314 (394)
T ss_dssp -----------HHHHHHHHHTTTCGGGBCCCBS------CSCTHHHHHT-CSEEEECCSCCSCCHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHHCCCCCEEEEECC------HHHHHHHHHH-CCEEEECCCCCCCCHHHHHHHHCCCCEEEE
T ss_conf -----------9999999997399875999276------6659999986-789996566678726899999649988981
Q ss_pred CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 887720000238709998999999999999999875008999999999999999999399999999999999983
Q 003549 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 696 ~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~e~yswe~~a~~ll~ly~~~ 770 (811)
+.||..|++.++.+|++++++|+++++++|.+++ +|++.++++++++++++.++|||+.++++++++|+..
T Consensus 315 ~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 385 (394)
T 2jjm_A 315 RVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL----KDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDV 385 (394)
T ss_dssp CCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 5898077763488539968999999999999997----4979999999999999987379999999999999999
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=1.00 E-value=1 Score=321.24 Aligned_cols=367 Identities=15% Similarity=0.199 Sum_probs=261.0
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEECC
Q ss_conf 25899835656665456799883323000277789999999999998999443330599666799988865653023158
Q 003549 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (811)
Q Consensus 279 ~~Iviis~hg~~~~~~vlg~p~tGG~~vyvl~~~raLe~eLa~~L~~~G~~V~~~ilIiT~~~p~~~~~~~~~~~e~i~~ 358 (811)
|||++++.+.. | .||.+.++. +|++.|+++||+|+ ++|.......
T Consensus 1 MkIl~i~~~~~---------~-~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYF---------P-FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC------------- 45 (374)
T ss_dssp -CEEEECSEEC---------T-TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------
T ss_pred CEEEEEEEECC---------C-CCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCC-------------
T ss_conf 96999972158---------8-761635999--------99999996798489----9964898878-------------
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 66749998247566653212346467500099999999999998819995299985999169999999974993999934
Q 003549 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 359 ~~~~~IlrvP~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~lla~~~gvp~v~t~H 438 (811)
..++.+.++|...... ......+...+.+.+.. .+||+||+|....+..+...++..+++.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCCEEEEECCCCCCC-----------HHHHHHHHHHHHHHHHC---CCCCEEEEECCCCCCEEEECCCCCCCEEEEECC
T ss_conf 8774799971686443-----------01677899999999850---699889996677885213001565421333035
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 98645599971357432101110113337799975--1899993498888410244554344434545541023216787
Q 003549 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN--NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (811)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~al~--~AD~IIt~S~~~i~~~~~~vgqy~s~~~f~lp~ly~v~~gi~v 516 (811)
+... .....+.+.. ..+...+. .+|.++++|....+...+ ..|++
T Consensus 112 ~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~-------------------~~~~~- 158 (374)
T 2iw1_A 112 GFLY-----------RLTSRYRHYA--AFERATFEQGKSTKLMMLTDKQIADFQK-------------------HYQTE- 158 (374)
T ss_dssp CHHH-----------HTSHHHHHHH--HHHHHHHSTTCCCEEEESCHHHHHHHHH-------------------HHCCC-
T ss_pred CCHH-----------HHCHHHHHHH--HHHHHHHHCCCCCEEEECCHHHHHHHHH-------------------HHCCC-
T ss_conf 6212-----------1047789999--9999986426775799869899999999-------------------71897-
Q ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 89948992599778888997168898863101101110694432011388789999799998126766898899999998
Q 003549 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (811)
Q Consensus 517 ~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~iGRL~~~Kgi~~LieA~~~ 596 (811)
..++.++|||+|.+.|.+......+. ..++.+|+ +.++++++++||+.+.||++.+++|+..
T Consensus 159 -~~~~~vi~ngv~~~~~~~~~~~~~~~---------------~~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 220 (374)
T 2iw1_A 159 -PERFQILPPGIYPDRKYSEQIPNSRE---------------IYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALAS 220 (374)
T ss_dssp -GGGEEECCCCCCGGGSGGGSCTTHHH---------------HHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHT
T ss_pred -HHHEEEECCCCCHHHCCCCCCHHHHH---------------HHHHHHCC--CCCCEEEEEECCCHHHCCHHHHHHHHHH
T ss_conf -11068856985877617644235799---------------99997289--9787299996464101388999999998
Q ss_pred HHCC-CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCC
Q ss_conf 1325-998399999474798887535779999999999998499993999035567688379999998006589966887
Q 003549 597 NSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (811)
Q Consensus 597 l~~~-~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadifV~PS~~ 675 (811)
+.+. .++++|+++|+|+. +.++++++++++.++|.|+|+ .+++..+++. +|++|.||.+
T Consensus 221 l~~~~~~~~~l~i~G~g~~-------------~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~v~ps~~ 280 (374)
T 2iw1_A 221 LPESLRHNTLLFVVGQDKP-------------RKFEALAEKLGVRSNVHFFSG------RNDVSELMAA-ADLLLHPAYQ 280 (374)
T ss_dssp SCHHHHHTEEEEEESSSCC-------------HHHHHHHHHHTCGGGEEEESC------CSCHHHHHHH-CSEEEECCSC
T ss_pred HHHCCCCCEEEEEECCCCH-------------HHHHHHHHHCCCCCCEEECCC------CCCHHHHHHH-CCEEEECCCC
T ss_conf 6760488669999708987-------------999999997398773797788------4038999984-6889835424
Q ss_pred CCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEC-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 888879999998499799848877200002387099989-9999999999999987500899999999999999999939
Q 003549 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID-PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 754 (811)
Q Consensus 676 E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~-p~D~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~e~y 754 (811)
|+||++++|||+||+|||+++.||..|++.++.+|++++ ++|+++++++|.+++ +|++.++++++++++++ +.+
T Consensus 281 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~ 355 (374)
T 2iw1_A 281 EAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYA-DTQ 355 (374)
T ss_dssp CSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-HHS
T ss_pred CCCCCHHHHHHHCCCCEEEECCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHHHH-HHH
T ss_conf 7755699999977998898269980444306983199679999899999999997----19499999999999999-875
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 9999999999999983
Q 003549 755 TWKIYSERLMTLAGVY 770 (811)
Q Consensus 755 swe~~a~~ll~ly~~~ 770 (811)
+|...++++.++++.+
T Consensus 356 ~~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 356 DLYSLPEKAADIITGG 371 (374)
T ss_dssp CCSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 3899999999999986
Done!