Query 003550
Match_columns 811
No_of_seqs 364 out of 2862
Neff 6.9
Searched_HMMs 29240
Date Tue Mar 26 17:48:05 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003550.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1600-1604//hhsearch_pdb/003550hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydy_A Glycerophosphoryl diest 1.0 1 1 375.2 24.2 287 89-392 28-355 (356)
2 1ydy_A Glycerophosphoryl diest 1.0 1 1 369.8 23.1 294 405-710 28-356 (356)
3 2oog_A Glycerophosphoryl diest 1.0 1 1 356.8 21.5 254 405-712 21-281 (287)
4 3l12_A Putative glycerophospho 1.0 1 1 355.9 26.1 283 394-714 4-310 (313)
5 2pz0_A Glycerophosphoryl diest 1.0 1 1 355.2 21.0 240 407-712 11-251 (252)
6 3qvq_A Phosphodiesterase OLEI0 1.0 1 1 345.9 24.0 243 405-712 7-250 (252)
7 3ks6_A Glycerophosphoryl diest 1.0 1 1 344.4 20.5 243 406-712 1-244 (250)
8 2o55_A Putative glycerophospho 1.0 1 1 344.1 23.5 243 405-713 4-257 (258)
9 1zcc_A Glycerophosphodiester p 1.0 1 1 343.7 10.2 237 408-718 2-241 (248)
10 2otd_A Glycerophosphodiester p 1.0 1 1 343.0 19.4 240 406-710 5-245 (247)
No 1
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=1.00 E-value=1 Score=375.17 Aligned_cols=287 Identities=20% Similarity=0.299 Sum_probs=166.0
Q ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 99978998099999998108999999998199972899631240699099814998888763122100245311127977
Q 003550 89 GDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (811)
Q Consensus 89 ~~~p~viAHRG~~~~~pENTl~a~~~A~~~ga~~~~iE~DVqlTkDgv~V~~HD~~l~~tT~~~~~~~~~~~~y~~~G~~ 168 (811)
+.+|+||||||+++.+||||++||+.|++.|+| ++|||||+||||++||+||.+|+|+|++.+.|+++++. +|
T Consensus 28 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~f~~~~~~---~g-- 100 (356)
T 1ydy_A 28 SNEKIVIAHRGASGYLPEHTLPAKAMAYAQGAD--YLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK---DG-- 100 (356)
T ss_dssp -CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT---TS--
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC--EEEEEEEECCCCCEEEECCCHHHHHCCCCCCCCCCCCC---CC--
T ss_conf 889669981898899986549999999986999--89823478789958994787687532865345543456---78--
Q ss_pred CCCCCCCCCCHHHHCCCCCCCCCCC--------CCCCCCC--CCCCCCCHHHHHHHHC--------CCCEEEEECCCHHH
Q ss_conf 8853333469876515510543457--------8988899--8754455989998609--------99569911260455
Q 003550 169 TPGWFSIDYTLNDLSNIILNQGVYS--------RTDKFDG--NGFQILTVQDMARQIK--------PPGLWLNIQHDAFY 230 (811)
Q Consensus 169 ~~g~~~~d~t~~eL~~l~~~~~~~~--------r~~~~~g--~~~~iptLeevl~~~~--------~~~l~leiK~~~~~ 230 (811)
.+++.|+||+||++++++.++.. .+..|.. ..++||||+|+|++++ ..+++||||++.+.
T Consensus 101 --~~~v~d~T~~eL~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~ 178 (356)
T 1ydy_A 101 --RYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFH 178 (356)
T ss_dssp --CCBGGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHH
T ss_pred --CCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
T ss_conf --734200749999747787655655665321233334344678767789999999987321236773488862475434
Q ss_pred HHCCCHHHHHHHHHHHHCCC------EEEECCCHHHHHHHHHH-----CCCCCCCEEEEECCCCCC--------CCCCCC
Q ss_conf 40280199999999642283------58936898999999876-----099875445654478866--------778643
Q 003550 231 AQHNLSMRSFVLSVSRSVVV------NYISSPEVNFLRSIAAR-----FRPSMTKLVFRFLGKSEI--------EPTTNQ 291 (811)
Q Consensus 231 ~~~~~~~~~~l~~~l~~~~~------~~IsSf~~~~L~~l~~~-----~p~~~~~lv~~~~~~~~~--------~~~~~~ 291 (811)
...+..+++.+++++++++. ++|+||+...|+++++. .| ..+++++....... .+..+.
T Consensus 179 ~~~~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~p~~~p--~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 256 (356)
T 1ydy_A 179 HQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGM--ELNLVQLIAYTDWNETQQKQPDGSWVNY 256 (356)
T ss_dssp HHTTCCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHTC--CCEEEEEECCGGGCCCEEECTTSCEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCC--CCEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 32103699999999997599877787899749999999998650524478--7149998446764333221345544455
Q ss_pred CHHHHH--HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHH-HH
Q ss_conf 367886--519999861312048975202577756678885899999983995999714899875557899949999-99
Q 003550 292 TYGSLL--KNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEY-LS 368 (811)
Q Consensus 292 ~y~~l~--~~L~~i~~~a~gi~v~~~~i~~~~~~~~l~~~~~lV~~aH~~Gl~V~~wt~~n~~~~~~~y~~D~~~e~-~~ 368 (811)
.|..+. ..+..+..++.++++++..+.+...++....++++|+.+|++|++|++||+|++... .|..|+ +++ ++
T Consensus 257 ~~~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~l~--~~~~d~-~~~~~~ 333 (356)
T 1ydy_A 257 NYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLP--EYTPDV-NQLYDA 333 (356)
T ss_dssp CCGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTSCC--TTCSSH-HHHHHH
T ss_pred CHHHHCCHHHHHHHHHHCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCC--CCCCCH-HHHHHH
T ss_conf 54654244559999852729766777704445665655788999999987998999987751012--222689-999999
Q ss_pred -HHHCCCCCCCEEECCCCCCCCHHH
Q ss_conf -997699755827415899850134
Q 003550 369 -FIDNGDFSVDGVLSDFPLTPSAAV 392 (811)
Q Consensus 369 -~i~~G~~~VDgIiTD~P~~~~~~~ 392 (811)
+++.| ||||+||+|+++.+++
T Consensus 334 ~l~~~G---VDgIiTD~P~~~~~~l 355 (356)
T 1ydy_A 334 LYNKAG---VNGLFTDFPDKAVKFL 355 (356)
T ss_dssp HHTTSC---CSEEEESCHHHHHHHH
T ss_pred HHHHCC---CCEEEECCHHHHHHHH
T ss_conf 999729---8789928887999964
No 2
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=1.00 E-value=1 Score=369.78 Aligned_cols=294 Identities=22% Similarity=0.266 Sum_probs=223.3
Q ss_pred CCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55522323898799999936999999998799956346641369918983068633556668776788644444555676
Q 003550 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS 484 (811)
Q Consensus 405 ~~~plIIaHRG~sg~~PENT~~Af~~A~~~Gad~IE~DVqlTKDGv~Vi~HD~~L~rtT~v~~~~f~~r~~~~~~~~~~~ 484 (811)
..+|+||||||+++.+||||++||++|++.|+|+||||||+||||++||+||.+|.|+|+++.. |+.|... .+.
T Consensus 28 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~-f~~~~~~-----~g~ 101 (356)
T 1ydy_A 28 SNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADR-FPDRARK-----DGR 101 (356)
T ss_dssp -CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHHH-STTCCCT-----TSC
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHHHCCCCCC-CCCCCCC-----CCC
T ss_conf 8896699818988999865499999999869998982347878995899478768753286534-5543456-----787
Q ss_pred CCCCCCCCHHHHHCCCCCCCCCC--CC---CCCCCCCCCCCCCCCCCHHHHHHHHHHC----CCCCEEEEEECCHHHHHH
Q ss_conf 53334779888803286655876--43---3345796787788788989999999824----897519997412147875
Q 003550 485 GIFSFSLIWDEIQTLIPQISNPY--FK---FKLFRNPKNKNAGKFMKLSDFLEMAKNA----NSLSGVLISIENAVYLAE 555 (811)
Q Consensus 485 G~~i~dlT~~EL~~L~~~~~~p~--~~---~~~~~n~~~~~~~~iptL~EvL~~~k~~----~~~~gi~IeIK~~~~~~~ 555 (811)
| ++.|+||+||++|+++.+..- +. ....+.+...+.++||||+|+|+++++. +...+++||||.+.....
T Consensus 102 ~-~v~d~T~~eL~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~ 180 (356)
T 1ydy_A 102 Y-YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQ 180 (356)
T ss_dssp C-BGGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHHHH
T ss_pred C-CHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
T ss_conf 3-420074999974778765565566532123333434467876778999999998732123677348886247543432
Q ss_pred HCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHC------CCCEEEEEECCCC-C----------------
Q ss_conf 2076099999999996199978883799980994799998723------4962999971520-0----------------
Q 003550 556 KQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK------TSYELVYKVKENI-R---------------- 612 (811)
Q Consensus 556 ~~g~~~~~~v~~~L~~~~~~~~~~~~ViiqSfd~~~L~~lk~~------~~~~~~~li~~~~-~---------------- 612 (811)
.+..+++.++++++++++.... ++|+|||||+++|+++|+. |.+++++++.... .
T Consensus 181 -~~~~~~~~v~~~l~~~~~~~~~-~~v~i~SF~~~~l~~~~~~~~p~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 258 (356)
T 1ydy_A 181 -EGKDIAAKTLEVLKKYGYTGKD-DKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNY 258 (356)
T ss_dssp -TTCCHHHHHHHHHHHTTCCSTT-SSBEEEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECCC
T ss_pred -CCHHHHHHHHHHHHHCCCCCCC-CCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH
T ss_conf -1036999999999975998777-87899749999999998650524478714999844676433322134554445554
Q ss_pred -H-HCHHHHHHHHHHHHHHCCCCCEEECCCC-CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf -0-0157699999764250456530103885-335789999999997699499991499412465556899199999999
Q 003550 613 -D-ALNQTIEDIKKFADSVVLSKESVYPLNS-AFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYY 689 (811)
Q Consensus 613 -d-~~~~~l~~i~~~a~~v~~~~~~i~p~~~-~~l~~~~~lV~~l~~~GL~V~vwt~nne~~~~~~~~~~d~~~e~~~~~ 689 (811)
. .++..++++..+++++++++..+.+... ......+++|+++|++|+.|++||+|++. ++ +|+.|+...+..++
T Consensus 259 ~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~--l~-~~~~d~~~~~~~~l 335 (356)
T 1ydy_A 259 DWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDK--LP-EYTPDVNQLYDALY 335 (356)
T ss_dssp GGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTS--CC-TTCSSHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCC--CC-CCCCCHHHHHHHHH
T ss_conf 6542445599998527297667777044456656557889999999879989999877510--12-22268999999999
Q ss_pred HHCCCCEEEECCHHHHHHHHH
Q ss_conf 842988999199599999998
Q 003550 690 EGAGIDGVITEFPMTAARYRR 710 (811)
Q Consensus 690 ~~~GVDGIiTD~P~~~~~~~~ 710 (811)
.++||||||||+|.++.++++
T Consensus 336 ~~~GVDgIiTD~P~~~~~~l~ 356 (356)
T 1ydy_A 336 NKAGVNGLFTDFPDKAVKFLN 356 (356)
T ss_dssp TTSCCSEEEESCHHHHHHHHC
T ss_pred HHCCCCEEEECCHHHHHHHHC
T ss_conf 972987899288879999649
No 3
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=1.00 E-value=1 Score=356.76 Aligned_cols=254 Identities=21% Similarity=0.231 Sum_probs=201.7
Q ss_pred CCCCEEECCCCCCCCCCCCHHHHHHHH-HHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 555223238987999999369999999-9879995634664136991898306863355666877678864444455567
Q 003550 405 SANLLVISKNGASGDYPSCTNLAYQKA-ISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG 483 (811)
Q Consensus 405 ~~~plIIaHRG~sg~~PENT~~Af~~A-~~~Gad~IE~DVqlTKDGv~Vi~HD~~L~rtT~v~~~~f~~r~~~~~~~~~~ 483 (811)
..+++||||||+++.+||||++||++| ++.|+|+||||||+||||++||+||.+|+|+|+ +
T Consensus 21 ~~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~------------------~ 82 (287)
T 2oog_A 21 NERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTN------------------G 82 (287)
T ss_dssp SCSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSS------------------C
T ss_pred CCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHCCCCC------------------C
T ss_conf 7763699449988999844699999999875999899776683599489978873204579------------------9
Q ss_pred CCCCCCCCCHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCHH
Q ss_conf 65333477988880328665587643-33457967877887889899999998248975199974121478752076099
Q 003550 484 SGIFSFSLIWDEIQTLIPQISNPYFK-FKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVT 562 (811)
Q Consensus 484 ~G~~i~dlT~~EL~~L~~~~~~p~~~-~~~~~n~~~~~~~~iptL~EvL~~~k~~~~~~gi~IeIK~~~~~~~~~g~~~~ 562 (811)
.| .+.|+||+||++|+++.+. +. +.....+.+.+ ++||||+|+|++++.. .+++||||.+... ..++
T Consensus 83 ~g-~v~d~T~~eL~~l~~~~~f--~~~~p~~~~~~~~~-~~iPtL~evL~~~~~~---~~l~IEiK~~~~~-----~~~~ 150 (287)
T 2oog_A 83 HG-KVEDYTLDELKQLDAGSWF--NKKYPKYARASYKN-AKVPTLDEILERYGPN---ANYYIETKSPDVY-----PGME 150 (287)
T ss_dssp CS-BGGGSCHHHHTTSCSSHHH--HHHCGGGCCGGGTT-CCCCBHHHHHHHHCTT---SCEEEECCCTTTS-----TTHH
T ss_pred CE-EHHHCCHHHHHHCCCCCCC--CCCCCCCCCCCCCC-CCCCCHHHHHHHHCCC---CEEEEEECCCCCC-----CHHH
T ss_conf 80-4422769999846888645--76675433234589-5688799999862758---5599997789874-----2199
Q ss_pred HHHHHHHHHCCCCCCC---CCEEEEEECCHHHHHHHHHC-CCCEEEEEECCCC-CHHCHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 9999999961999788---83799980994799998723-4962999971520-00015769999976425045653010
Q 003550 563 NSVMEALGNAGYNKQT---ALKVMIQSTDSSVLMKLREK-TSYELVYKVKENI-RDALNQTIEDIKKFADSVVLSKESVY 637 (811)
Q Consensus 563 ~~v~~~L~~~~~~~~~---~~~ViiqSfd~~~L~~lk~~-~~~~~~~li~~~~-~d~~~~~l~~i~~~a~~v~~~~~~i~ 637 (811)
+.++++++++++.... .++|+|+||+++.|..+++. |+++++++++... .......++.+..++.++.++..
T Consensus 151 ~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--- 227 (287)
T 2oog_A 151 EQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYT--- 227 (287)
T ss_dssp HHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGG---
T ss_pred HHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHEEECCCHH---
T ss_conf 99999999738864456777988999589999999998689984899743775344689999998654669740475---
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHC
Q ss_conf 388533578999999999769949999149941246555689919999999984298899919959999999800
Q 003550 638 PLNSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRRNR 712 (811)
Q Consensus 638 p~~~~~l~~~~~lV~~l~~~GL~V~vwt~nne~~~~~~~~~~d~~~e~~~~~~~~GVDGIiTD~P~~~~~~~~~~ 712 (811)
.....+|+.+|++|+.|++||+|++. ++..++ ++||||||||+|..+.++++..
T Consensus 228 -------~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~~~~~ 281 (287)
T 2oog_A 228 -------DLTEQNTHHLKDLGFIVHPYTVNEKA-------------DMLRLN-KYGVDGVFTNFADKYKEVIKEG 281 (287)
T ss_dssp -------GCCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHC-
T ss_pred -------HCCHHHHHHHHHCCCEEEEEECCCHH-------------HHHHHH-HCCCCEEEECCHHHHHHHHHCC
T ss_conf -------54899999999789868997279999-------------999999-7599999969888999998621
No 4
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=1.00 E-value=1 Score=355.95 Aligned_cols=283 Identities=18% Similarity=0.231 Sum_probs=209.2
Q ss_pred HHHCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 32002789654555223238987999999369999999987999563466413699189830686335566687767886
Q 003550 394 CFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSI 473 (811)
Q Consensus 394 ~~~~~~~~~~~~~~plIIaHRG~sg~~PENT~~Af~~A~~~Gad~IE~DVqlTKDGv~Vi~HD~~L~rtT~v~~~~f~~r 473 (811)
+|.++....+....+.||||||+++.+||||++||++|++.|+|+||||||+||||++||+||.+|.|+|+++.
T Consensus 4 ~~~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~------ 77 (313)
T 3l12_A 4 GFSQLEGLRGHPSVVRVIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDG------ 77 (313)
T ss_dssp CCGGGGGTCCBTTBCEEEEETTTTTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBCT------
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHCCCCCCCC------
T ss_conf 77666321368887179972898999870179999999986999899877887799789977861213202367------
Q ss_pred CCCCCCCC--CCCCCCCCCCCHHHHHCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCHHHHHHHHHHCC-CCCEEEEEEC
Q ss_conf 44444555--676533347798888032866558764333-4579-67877887889899999998248-9751999741
Q 003550 474 TTTIPEIM--AGSGIFSFSLIWDEIQTLIPQISNPYFKFK-LFRN-PKNKNAGKFMKLSDFLEMAKNAN-SLSGVLISIE 548 (811)
Q Consensus 474 ~~~~~~~~--~~~G~~i~dlT~~EL~~L~~~~~~p~~~~~-~~~n-~~~~~~~~iptL~EvL~~~k~~~-~~~gi~IeIK 548 (811)
+++ .+.+..+.++||+||++|+++.+.+.++++ .+.. ..+.+ ++||||+|+|+++++.+ ...+++||||
T Consensus 78 -----~G~~~~~~~~~v~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~~g-~~iptL~evl~~~~~~~~~~~~l~IEiK 151 (313)
T 3l12_A 78 -----QGHWLTGAERQVAEMTYAEIRALDVGGLDGRTVYGRRFPDQAFLTG-IHVPRLGELLDLCAGYGDQAPYLLLELK 151 (313)
T ss_dssp -----TSCBCCSSCCBGGGSCHHHHHTSBCSSCCTTSHHHHHSTTSCCCSS-CCCCBHHHHHHHHHTTGGGCCEEEEEEC
T ss_pred -----CCCCCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf -----8863478886230095999952888875566544445743112489-7588799999998753787713899972
Q ss_pred CHHHHHHH--CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHC-CCCEEEEEECCCCC--HH---CH----
Q ss_conf 21478752--076099999999996199978883799980994799998723-49629999715200--00---15----
Q 003550 549 NAVYLAEK--QGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIR--DA---LN---- 616 (811)
Q Consensus 549 ~~~~~~~~--~g~~~~~~v~~~L~~~~~~~~~~~~ViiqSfd~~~L~~lk~~-~~~~~~~li~~~~~--d~---~~---- 616 (811)
........ ....+++.++++++++++. ++|+|+||+++.|..+++. |+++++++++.... +. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~v~~~l~~~~~~----~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~ 227 (313)
T 3l12_A 152 SDPALMHDHAARAEMVAAVLADVRRYRME----PRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVG 227 (313)
T ss_dssp CCGGGTTCHHHHHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------C
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCC----CCEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 68765555556899999999999973987----88799829879999999878998389995156443443222322123
Q ss_pred -------HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf -------7699999764250456530103885335789999999997699499991499412465556899199999999
Q 003550 617 -------QTIEDIKKFADSVVLSKESVYPLNSAFITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYY 689 (811)
Q Consensus 617 -------~~l~~i~~~a~~v~~~~~~i~p~~~~~l~~~~~lV~~l~~~GL~V~vwt~nne~~~~~~~~~~d~~~e~~~~~ 689 (811)
..+.. ++..+++ ..+.+. +....+++|+.+|++|+.|++||+|++. ++..++
T Consensus 228 ~~~~~~~~~l~~---~~~~~~~--~~~~~~---~~~~~~~~v~~~~~~Gl~V~~WTVn~~~-------------~~~~l~ 286 (313)
T 3l12_A 228 PDYDRMTESLPQ---AVASAGG--QLWCPY---FLDVTPELVAEAHDLGLIVLTWTVNEPE-------------DIRRMA 286 (313)
T ss_dssp CCTTTCCSCHHH---HHHHHTC--SEEEEB---GGGCCHHHHHHHHHTTCEEEEBCCCSHH-------------HHHHHH
T ss_pred CCCHHCCCCHHH---HHHHHCC--CEEECC---HHCCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH
T ss_conf 430000010799---9998199--498263---3018999999999879989987089999-------------999999
Q ss_pred HHCCCCEEEECCHHHHHHHHHHCCC
Q ss_conf 8429889991995999999980045
Q 003550 690 EGAGIDGVITEFPMTAARYRRNRCL 714 (811)
Q Consensus 690 ~~~GVDGIiTD~P~~~~~~~~~~c~ 714 (811)
++||||||||+|..++++++++++
T Consensus 287 -~~GVDgIiTD~P~~~~~~l~~~g~ 310 (313)
T 3l12_A 287 -TTGVDGIVTDYPGRTQRILIDMGL 310 (313)
T ss_dssp -HHTCSEEEESCHHHHHHHHHHTTC
T ss_pred -HCCCCEEEECCHHHHHHHHHHCCC
T ss_conf -739999993888999999985386
No 5
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=1.00 E-value=1 Score=355.25 Aligned_cols=240 Identities=22% Similarity=0.288 Sum_probs=197.6
Q ss_pred CCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 52232389879999993699999999879995634664136991898306863355666877678864444455567653
Q 003550 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGI 486 (811)
Q Consensus 407 ~plIIaHRG~sg~~PENT~~Af~~A~~~Gad~IE~DVqlTKDGv~Vi~HD~~L~rtT~v~~~~f~~r~~~~~~~~~~~G~ 486 (811)
+|.||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|+ +.|
T Consensus 11 ~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~------------------~~g- 71 (252)
T 2pz0_A 11 KTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTN------------------GEG- 71 (252)
T ss_dssp CCEEEEETTTTTTSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSS------------------CCS-
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCEEEEECCCCCCCCCC------------------CCC-
T ss_conf 8629981899999982039999999986979899998890299599976884466589------------------986-
Q ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCHHHHHH
Q ss_conf 33477988880328665587643334579678778878898999999982489751999741214787520760999999
Q 003550 487 FSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVM 566 (811)
Q Consensus 487 ~i~dlT~~EL~~L~~~~~~p~~~~~~~~n~~~~~~~~iptL~EvL~~~k~~~~~~gi~IeIK~~~~~~~~~g~~~~~~v~ 566 (811)
.+.++||+||++|+++.+. .+.+.+ ++||||+|+|+++++. ..+++||||.+... ...+++.++
T Consensus 72 ~v~~~t~~eL~~l~~~~~~---------~~~~~~-~~iPtL~evL~~~~~~--~~~l~iEiK~~~~~----~~~~~~~v~ 135 (252)
T 2pz0_A 72 FVKDFTLEEIKKLDAGIKF---------GEKFAG-ERIPTLYEVFELIGDK--DFLVNIEIKSGIVL----YPGIEEKLI 135 (252)
T ss_dssp BGGGSCHHHHTTSCSSTTT---------CGGGTT-CCCCBHHHHHHHHTTS--CCEEEEEECCSSCC----CTTHHHHHH
T ss_pred CHHHCCHHHHHHCCCCCCC---------CCCCCC-CCCCCHHHHHHHHHHC--CCEEEEEECCCCCC----CHHHHHHHH
T ss_conf 6655869999636888877---------877899-7388899999976612--97699994788764----678999999
Q ss_pred HHHHHCCCCCCCCCEEEEEECCHHHHHHHHHC-CCCEEEEEECCCCCHHCHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
Q ss_conf 99996199978883799980994799998723-49629999715200001576999997642504565301038853357
Q 003550 567 EALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFIT 645 (811)
Q Consensus 567 ~~L~~~~~~~~~~~~ViiqSfd~~~L~~lk~~-~~~~~~~li~~~~~d~~~~~l~~i~~~a~~v~~~~~~i~p~~~~~l~ 645 (811)
++++++++. ++|+|+||+++.|+.+++. |.+++++++.....+. .. ++...++ ..+.+.. ..
T Consensus 136 ~~l~~~~~~----~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~----~~----~~~~~~~--~~i~~~~---~~ 198 (252)
T 2pz0_A 136 KAIKEYNFE----ERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEP----WH----MALRMEA--YSLHPFY---FN 198 (252)
T ss_dssp HHHHHTTCT----TTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSST----HH----HHHHTTC--SEEEEBG---GG
T ss_pred HHHHHCCCC----CCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCH----HH----HHHHCCC--EEEECCH---HC
T ss_conf 999964997----888998099999999998789987899944762149----99----9997398--2996262---10
Q ss_pred CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHC
Q ss_conf 8999999999769949999149941246555689919999999984298899919959999999800
Q 003550 646 SATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRRNR 712 (811)
Q Consensus 646 ~~~~lV~~l~~~GL~V~vwt~nne~~~~~~~~~~d~~~e~~~~~~~~GVDGIiTD~P~~~~~~~~~~ 712 (811)
..+.+|+.+|++|+.|++||+|++. ++..++ ++||||||||+|..+.++++++
T Consensus 199 ~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GvdgIiTD~P~~~~~~l~~~ 251 (252)
T 2pz0_A 199 IIPELVEGCKKNGVKLFPWTVDRKE-------------DMERMI-KAGVDGIITDDPETLINLVRKG 251 (252)
T ss_dssp CCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHC--
T ss_pred CCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HCCCCEEECCCHHHHHHHHHHC
T ss_conf 9999999999879989997899899-------------999999-8599999938989999987406
No 6
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=1.00 E-value=1 Score=345.94 Aligned_cols=243 Identities=17% Similarity=0.192 Sum_probs=194.9
Q ss_pred CCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55522323898799999936999999998799956346641369918983068633556668776788644444555676
Q 003550 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS 484 (811)
Q Consensus 405 ~~~plIIaHRG~sg~~PENT~~Af~~A~~~Gad~IE~DVqlTKDGv~Vi~HD~~L~rtT~v~~~~f~~r~~~~~~~~~~~ 484 (811)
.+.|+||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|.|+|+ +.
T Consensus 7 ~~~p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~------------------~~ 68 (252)
T 3qvq_A 7 SFLPQVIAHRGSSGQAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTD------------------GD 68 (252)
T ss_dssp GGCCSEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSS------------------CC
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCC------------------CC
T ss_conf 888789983899999985179999999985989899988787799589979975133369------------------99
Q ss_pred CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCHHHH
Q ss_conf 53334779888803286655876433345796787788788989999999824897519997412147875207609999
Q 003550 485 GIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNS 564 (811)
Q Consensus 485 G~~i~dlT~~EL~~L~~~~~~p~~~~~~~~n~~~~~~~~iptL~EvL~~~k~~~~~~gi~IeIK~~~~~~~~~g~~~~~~ 564 (811)
| .+.++||+||++|+++.+. ++.+.+ ++||||+|+|+++++.. .+++||||...... ..+.+.
T Consensus 69 ~-~v~~~t~~el~~l~~~~~~---------~~~~~~-~~iptL~evl~~~~~~~--~~l~iEiK~~~~~~----~~~~~~ 131 (252)
T 3qvq_A 69 G-LIYKTPLAELKQLDAGSWK---------GQEYQQ-ETIPTLLEAIEVISQYG--MGLNLELKPCEGLE----EETIAA 131 (252)
T ss_dssp S-BGGGSCHHHHTTSCSSTTT---------CGGGTT-CCCCBHHHHHHHHHHTT--CEEEEEECCCTTCH----HHHHHH
T ss_pred C-EEECCCHHHHHCCCCCCCC---------CCCCCC-CCCCCHHHHHHHHHCCC--CEEEEEECCCCCCC----HHHHHH
T ss_conf 5-6640849999317888766---------866799-76867999999875359--57999966798844----899999
Q ss_pred HHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHC-CCCEEEEEECCCCCHHCHHHHHHHHHHHHHHCCCCCEEECCCCCC
Q ss_conf 9999996199978883799980994799998723-496299997152000015769999976425045653010388533
Q 003550 565 VMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAF 643 (811)
Q Consensus 565 v~~~L~~~~~~~~~~~~ViiqSfd~~~L~~lk~~-~~~~~~~li~~~~~d~~~~~l~~i~~~a~~v~~~~~~i~p~~~~~ 643 (811)
+.+++++++... .+|+++|||++.|+.+++. |.+++++++.....+ .. .++...+. ..+.+. +
T Consensus 132 v~~~l~~~~~~~---~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~-----~~---~~~~~~~~--~~i~~~---~ 195 (252)
T 3qvq_A 132 SVEVLKQHWPQD---LPLLFSSFNYFALVSAKALWPEIARGYNVSAIPSA-----WQ---ERLEHLDC--AGLHIH---Q 195 (252)
T ss_dssp HHHHHHHHSCTT---SCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCTT-----HH---HHHHHHTC--SEEEEE---G
T ss_pred HHHHHHHHCCCC---CCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCHH-----HH---HHHHHCCC--EEEECC---H
T ss_conf 999999738666---87899959999999999879998689997467220-----89---99997699--099345---3
Q ss_pred CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHC
Q ss_conf 578999999999769949999149941246555689919999999984298899919959999999800
Q 003550 644 ITSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRRNR 712 (811)
Q Consensus 644 l~~~~~lV~~l~~~GL~V~vwt~nne~~~~~~~~~~d~~~e~~~~~~~~GVDGIiTD~P~~~~~~~~~~ 712 (811)
.....++|+.+|++|+.|++||+|++. ++..++ ++||||||||+|..+.+++++.
T Consensus 196 ~~~~~~~v~~~~~~G~~v~~WTvn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~l~~~ 250 (252)
T 3qvq_A 196 SFFDVQQVSDIKAAGYKVLAFTINDES-------------LALKLY-NQGLDAVFSDYPQKIQSAIDSH 250 (252)
T ss_dssp GGCCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HTTCCEEEESSHHHHHHHHHHC
T ss_pred HHCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HCCCCEEEECCHHHHHHHHHHH
T ss_conf 319999999999879989998689999-------------999999-7599999959989999999975
No 7
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=1.00 E-value=1 Score=344.37 Aligned_cols=243 Identities=12% Similarity=0.071 Sum_probs=198.3
Q ss_pred CCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55223238987999999369999999987999563466413699189830686335566687767886444445556765
Q 003550 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSG 485 (811)
Q Consensus 406 ~~plIIaHRG~sg~~PENT~~Af~~A~~~Gad~IE~DVqlTKDGv~Vi~HD~~L~rtT~v~~~~f~~r~~~~~~~~~~~G 485 (811)
+.|+||||||+++.+||||++||++|++.|+|+||||||+||||++||+||.+|.|+|+ +.|
T Consensus 1 ~mp~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~------------------~~g 62 (250)
T 3ks6_A 1 GMTRIASHRGGTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTD------------------MTG 62 (250)
T ss_dssp CCCEEEEETTTHHHHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBS------------------CCS
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCC------------------CCC
T ss_conf 99659979999999984359999999983999899987680599889979886556259------------------998
Q ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCHHHHH
Q ss_conf 33347798888032866558764333457967877887889899999998248975199974121478752076099999
Q 003550 486 IFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSV 565 (811)
Q Consensus 486 ~~i~dlT~~EL~~L~~~~~~p~~~~~~~~n~~~~~~~~iptL~EvL~~~k~~~~~~gi~IeIK~~~~~~~~~g~~~~~~v 565 (811)
.+.++||+||++|+.+.+ . .++||||+|+|+++++.. .+++||||...... ....+++.+
T Consensus 63 -~v~~~t~~el~~l~~~~~--------------~-~~~iptL~evl~~~~~~~--~~l~iEiK~~~~~~--~~~~~~~~v 122 (250)
T 3ks6_A 63 -AIVDMTLAKVKTATIRYG--------------A-GSHPMTLEELCALYVDSH--VNFRCEIKPGVDGL--PYEGFVALV 122 (250)
T ss_dssp -BGGGSCHHHHHHCCBTTS--------------T-TCCCEEHHHHHHHHTTCS--CEEEEEECCCTTSC--CCTTHHHHH
T ss_pred -EEECCCHHHHHCCCCCCC--------------C-CCCCCCHHHHHHHHHCCC--CEEEEEECCCCCCC--CCHHHHHHH
T ss_conf -521095999942888999--------------9-955867999999876159--67999967886667--646799999
Q ss_pred HHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHC-CCCEEEEEECCCCCHHCHHHHHHHHHHHHHHCCCCCEEECCCCCCC
Q ss_conf 999996199978883799980994799998723-4962999971520000157699999764250456530103885335
Q 003550 566 MEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFI 644 (811)
Q Consensus 566 ~~~L~~~~~~~~~~~~ViiqSfd~~~L~~lk~~-~~~~~~~li~~~~~d~~~~~l~~i~~~a~~v~~~~~~i~p~~~~~l 644 (811)
+++++++++. ++++++|||++.|..+|+. |.++++++..... ...++..+..++...+++ .+.+. +.
T Consensus 123 ~~~l~~~~~~----~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~---~~ 190 (250)
T 3ks6_A 123 IAGLERHSML----ERTTFSSFLLASMDELWKATTRPRLWLVSPSVL---QQLGPGAVIETAIAHSIH--EIGVH---ID 190 (250)
T ss_dssp HHHHHHTTCG----GGEEEEESCHHHHHHHHHHCCSCEEEEECHHHH---HHHHHHHHHHHHHHTTCC--EEEEE---GG
T ss_pred HHHHHHCCCC----CCEEEEECCHHHHHHHHHHCCCCCEEEEECCCC---CCCCHHHHHHHHHHCCCC--EEECC---HH
T ss_conf 9999964997----878999599999999998789985999822210---124556799999862998--99656---21
Q ss_pred CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHC
Q ss_conf 78999999999769949999149941246555689919999999984298899919959999999800
Q 003550 645 TSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRRNR 712 (811)
Q Consensus 645 ~~~~~lV~~l~~~GL~V~vwt~nne~~~~~~~~~~d~~~e~~~~~~~~GVDGIiTD~P~~~~~~~~~~ 712 (811)
...+++|+.+|++|+.|++||+|++. ++..++ ++||||||||+|..+.+++++.
T Consensus 191 ~~~~~~v~~~~~~G~~V~~WTvn~~~-------------~~~~l~-~~GVDgIiTD~P~~~~~~~~~~ 244 (250)
T 3ks6_A 191 TADAGLMAQVQAAGLDFGCWAAHTPS-------------QITKAL-DLGVKVFTTDRPTLAIALRTEH 244 (250)
T ss_dssp GCCHHHHHHHHHTTCEEEEECCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHCCCEEEEEECCCHH-------------HHHHHH-HCCCCEEECCCHHHHHHHHHHH
T ss_conf 08999999999879989998279999-------------999999-7699999859999999999984
No 8
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=1.00 E-value=1 Score=344.10 Aligned_cols=243 Identities=12% Similarity=0.097 Sum_probs=196.2
Q ss_pred CCCCEEECCCCCC--CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECC---CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5552232389879--9999936999999998799956346641369918983068---6335566687767886444445
Q 003550 405 SANLLVISKNGAS--GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI---NLINSTNAAQSKFNSITTTIPE 479 (811)
Q Consensus 405 ~~~plIIaHRG~s--g~~PENT~~Af~~A~~~Gad~IE~DVqlTKDGv~Vi~HD~---~L~rtT~v~~~~f~~r~~~~~~ 479 (811)
..+|+||||||++ +.+||||++||++|++.|+|+||||||+||||++||+||. +|.|+|+
T Consensus 4 ~~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~--------------- 68 (258)
T 2o55_A 4 VIIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKD--------------- 68 (258)
T ss_dssp CCCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTT---------------
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCCCEEECC---------------
T ss_conf 66763898899988898986089999999985969899877890599599993898762132179---------------
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCC
Q ss_conf 55676533347798888032866558764333457967877887889899999998248975199974121478752076
Q 003550 480 IMAGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGM 559 (811)
Q Consensus 480 ~~~~~G~~i~dlT~~EL~~L~~~~~~p~~~~~~~~n~~~~~~~~iptL~EvL~~~k~~~~~~gi~IeIK~~~~~~~~~g~ 559 (811)
+.| ++.++||+||++|+.+. .++||||+|+|+++++.+...+++||+|...... ...
T Consensus 69 ---~~g-~v~~~t~~eL~~l~~~~-----------------~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~--~~~ 125 (258)
T 2o55_A 69 ---GTS-RIGDLSLEELKRLDVGG-----------------GHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKR--KES 125 (258)
T ss_dssp ---TTC-BGGGSCHHHHTTCBSSS-----------------SCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSS--TTS
T ss_pred ---CCE-EHHHCCHHHHHHCCCCC-----------------CCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC--CCH
T ss_conf ---972-61019699993158899-----------------9856779999998663067628999975687666--564
Q ss_pred CHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHC-CCCEEEEEE-CCCCCHHCHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 099999999996199978883799980994799998723-496299997-152000015769999976425045653010
Q 003550 560 SVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKV-KENIRDALNQTIEDIKKFADSVVLSKESVY 637 (811)
Q Consensus 560 ~~~~~v~~~L~~~~~~~~~~~~ViiqSfd~~~L~~lk~~-~~~~~~~li-~~~~~d~~~~~l~~i~~~a~~v~~~~~~i~ 637 (811)
.+++.++++++++++. ++|+|+||++..+..+++. |.+++++++ +....+.. .-+...+ ..++ ..+.
T Consensus 126 ~~~~~v~~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~-~~~~~~~----~~~~--~~v~ 194 (258)
T 2o55_A 126 GDHQRLLLLVEKYHMQ----ERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTPL-DFVEQAC----YGDA--NGVS 194 (258)
T ss_dssp SHHHHHHHHHHTTTCG----GGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCCCT-THHHHHH----HTTC--SEEE
T ss_pred HHHHHHHHHHHHCCCC----CCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCHH-HHHHHHH----HCCC--EEEE
T ss_conf 8999999999970998----88899928999999999878998689997378878989-9999998----5598--0994
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCEEEEEC----CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC
Q ss_conf 38853357899999999976994999914----99412465556899199999999842988999199599999998004
Q 003550 638 PLNSAFITSATDIVQRLQSFKLPVYVETF----SNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRRNRC 713 (811)
Q Consensus 638 p~~~~~l~~~~~lV~~l~~~GL~V~vwt~----nne~~~~~~~~~~d~~~e~~~~~~~~GVDGIiTD~P~~~~~~~~~~c 713 (811)
+. +....+.+|+.+|++|+.|++||+ |++. ++..++ ++||||||||+|..+.+++++.|
T Consensus 195 ~~---~~~~~~~~v~~~~~~G~~v~~wTv~~~~n~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~l~~~~ 257 (258)
T 2o55_A 195 ML---FHYLTKEQVCTAHEKGLSVTVWMPWIFDDSEE-------------DWKKCL-ELQVDLICSNYPFGLMNFLSNIS 257 (258)
T ss_dssp EE---GGGCCHHHHHHHHHTTCEEEEECCTTCCCCHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHTC--
T ss_pred CC---HHHCCHHHHHHHHHCCCEEEEEECCCCCCCHH-------------HHHHHH-HCCCCEEEECCHHHHHHHHHHHC
T ss_conf 27---02159999999998799899964777789799-------------999999-86999999289899999999742
No 9
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=1.00 E-value=1 Score=343.70 Aligned_cols=237 Identities=15% Similarity=0.058 Sum_probs=193.9
Q ss_pred CEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22323898799999936999999998799956346641369918983068633556668776788644444555676533
Q 003550 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (811)
Q Consensus 408 plIIaHRG~sg~~PENT~~Af~~A~~~Gad~IE~DVqlTKDGv~Vi~HD~~L~rtT~v~~~~f~~r~~~~~~~~~~~G~~ 487 (811)
|+||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|+ +.| .
T Consensus 2 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~------------------~~g-~ 62 (248)
T 1zcc_A 2 TKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTN------------------GTG-P 62 (248)
T ss_dssp CEEEETTTTTTTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSS------------------CCS-B
T ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCC------------------CCC-C
T ss_conf 738988999999984089999999985989999984494799799978896455359------------------976-5
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCHHHHHHH
Q ss_conf 34779888803286655876433345796787788788989999999824897519997412147875207609999999
Q 003550 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVME 567 (811)
Q Consensus 488 i~dlT~~EL~~L~~~~~~p~~~~~~~~n~~~~~~~~iptL~EvL~~~k~~~~~~gi~IeIK~~~~~~~~~g~~~~~~v~~ 567 (811)
+.++||+||++|+.+.+ .+||||+|+|+++++.. .+++||||...... . .+++.+++
T Consensus 63 v~~~t~~eL~~l~~g~~-----------------~~iptL~evl~~~~~~~--~~l~iEiK~~~~~~--~--~~~~~v~~ 119 (248)
T 1zcc_A 63 VGHMLSSEIDTLDAGGW-----------------FDDRFKGAIVPRLDAYL--EHLRGRAGVYIELK--Y--CDPAKVAA 119 (248)
T ss_dssp STTSCHHHHTTSCSSTT-----------------TCGGGTTCCCCBHHHHH--HHHTTTCEEEEEEE--E--SCHHHHHH
T ss_pred HHHCCHHHHHHCCCCCC-----------------CCCCCHHHHHHHHHHCC--CEEEEEECCCCCCC--C--HHHHHHHH
T ss_conf 43397999985789999-----------------88888999999878609--67999967787765--1--89999999
Q ss_pred HHHHCCCCCCCCCEEEEEECCHHHHHHHHHC-CCCEEEEEECCCCCHHCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
Q ss_conf 9996199978883799980994799998723-496299997152000015769999976425045653010388533578
Q 003550 568 ALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFITS 646 (811)
Q Consensus 568 ~L~~~~~~~~~~~~ViiqSfd~~~L~~lk~~-~~~~~~~li~~~~~d~~~~~l~~i~~~a~~v~~~~~~i~p~~~~~l~~ 646 (811)
+++++++. ++|+|+||+++.+..+++. |++++++++..... .. .++...++ ..+.+... ..
T Consensus 120 ~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~-----~~----~~~~~~~~--~~i~~~~~---~~ 181 (248)
T 1zcc_A 120 LVRHLGMV----RDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKS-----PS----LVGAVHHA--SIIEITPA---QM 181 (248)
T ss_dssp HHHHHTCS----TTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSS-----TH----HHHHTTCC--SEEEECHH---HH
T ss_pred HHHHHCCC----CCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCC-----HH----HHHHHCCC--CEEEECHH---HH
T ss_conf 99970998----8789997999999999987999839999368746-----89----99997499--99985678---80
Q ss_pred -CHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH-HHHHCCCCEEEECCHHHHHHHHHHCCCCCCC
Q ss_conf -99999999976994999914994124655568991999999-9984298899919959999999800457899
Q 003550 647 -ATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINT-YYEGAGIDGVITEFPMTAARYRRNRCLKRGD 718 (811)
Q Consensus 647 -~~~lV~~l~~~GL~V~vwt~nne~~~~~~~~~~d~~~e~~~-~~~~~GVDGIiTD~P~~~~~~~~~~c~~~~~ 718 (811)
.+.+|+.+|++|+.|++||+|++. ++.. ++ ++||||||||+|..+.++++..|-....
T Consensus 182 ~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~~l~-~~GvdgIiTD~p~~~~~~~~~~~~~~~~ 241 (248)
T 1zcc_A 182 RRPGIIEASRKAGLEIMVYYGGDDM-------------AVHREIA-TSDVDYINLDRPDLFAAVRSGMAELLLA 241 (248)
T ss_dssp HSHHHHHHHHHHTCEEEEECCCCCH-------------HHHHHHH-HSSCSEEEESCHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHHH-HCCCCEEEECCHHHHHHHHHHHCCHHHC
T ss_conf 9999999999779989998789999-------------9999999-8299999979989999999973250221
No 10
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=1.00 E-value=1 Score=343.03 Aligned_cols=240 Identities=17% Similarity=0.085 Sum_probs=184.9
Q ss_pred CCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55223238987999999369999999987999563466413699189830686335566687767886444445556765
Q 003550 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSG 485 (811)
Q Consensus 406 ~~plIIaHRG~sg~~PENT~~Af~~A~~~Gad~IE~DVqlTKDGv~Vi~HD~~L~rtT~v~~~~f~~r~~~~~~~~~~~G 485 (811)
+.|+||||||+++.+||||++||++|++.|+|+||||||+||||++||+||.+|.|+|+ +.|
T Consensus 5 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~------------------~~g 66 (247)
T 2otd_A 5 PYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSN------------------GWG 66 (247)
T ss_dssp CCCSEEETTTTTTSSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSS------------------CCS
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCC------------------CCC
T ss_conf 78758978899999983049999999985989899885385699699988997666699------------------996
Q ss_pred CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCHHHHH
Q ss_conf 33347798888032866558764333457967877887889899999998248975199974121478752076099999
Q 003550 486 IFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSV 565 (811)
Q Consensus 486 ~~i~dlT~~EL~~L~~~~~~p~~~~~~~~n~~~~~~~~iptL~EvL~~~k~~~~~~gi~IeIK~~~~~~~~~g~~~~~~v 565 (811)
.+.++||+||++|+++.+. .+.+.+ ++||||+|+|+++++.. .+++||+|....... .+++.+
T Consensus 67 -~v~~~t~~eL~~l~~g~~~---------~~~~~~-~~iptL~evl~~~~~~~--~~l~iEiK~~~~~~~----~~~~~v 129 (247)
T 2otd_A 67 -VAGELNWQDLLRVDAGSWY---------SKAFKG-EPLPLLSQVAERCREHG--MMANIEIKPTTGTGP----LTGKMV 129 (247)
T ss_dssp -BGGGSCHHHHTTCCSSTTT---------CGGGTT-CCCCBHHHHHHHHHHTT--CEEEEEECCCTTCHH----HHHHHH
T ss_pred -CHHHCCHHHHHHCCCCCCC---------CCCCCC-CCCCCHHHHHHHHHHCC--CEEEEEECCCCCCCH----HHHHHH
T ss_conf -4765869999638899766---------877899-96888999999877509--779999788877553----799999
Q ss_pred HHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHC-CCCEEEEEECCCCCHHCHHHHHHHHHHHHHHCCCCCEEECCCCCCC
Q ss_conf 999996199978883799980994799998723-4962999971520000157699999764250456530103885335
Q 003550 566 MEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLSKESVYPLNSAFI 644 (811)
Q Consensus 566 ~~~L~~~~~~~~~~~~ViiqSfd~~~L~~lk~~-~~~~~~~li~~~~~d~~~~~l~~i~~~a~~v~~~~~~i~p~~~~~l 644 (811)
++++.++.... .+|+|+||+++.+..+++. |.++++++++....+. .+ ++...++ ..+.+.. .
T Consensus 130 ~~~l~~~~~~~---~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~----~~----~~~~~~~--~~i~~~~---~ 193 (247)
T 2otd_A 130 ALAARQLWAGM---TPPLLSSFEIDALEAAQQAAPELPRGLLLDEWRDDW----RE----LTARLGC--VSIHLNH---K 193 (247)
T ss_dssp HHHHHHHTTTS---CCCEEEESCHHHHHHHHHHCTTSCEEEEESSCCTTH----HH----HHHHHTC--SEEEEEG---G
T ss_pred HHHHHHHHCCC---CCEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCH----HH----HHHHCCC--EEEECCH---H
T ss_conf 99999875476---878997599999999998789987899945774149----99----9997598--1993374---7
Q ss_pred CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
Q ss_conf 789999999997699499991499412465556899199999999842988999199599999998
Q 003550 645 TSATDIVQRLQSFKLPVYVETFSNEFVSQAWDFFSDPTVEINTYYEGAGIDGVITEFPMTAARYRR 710 (811)
Q Consensus 645 ~~~~~lV~~l~~~GL~V~vwt~nne~~~~~~~~~~d~~~e~~~~~~~~GVDGIiTD~P~~~~~~~~ 710 (811)
..++.+|+.+|++|+.|++||+|++. ++..++ ++||||||||+|..+.++++
T Consensus 194 ~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~l~ 245 (247)
T 2otd_A 194 LLDKARVMQLKDAGLRILVYTVNKPQ-------------HAAELL-RWGVDCICTDAIDVIGPNFT 245 (247)
T ss_dssp GCCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HHTCSEEEESCTTTSCTTCC
T ss_pred HCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HCCCCEEEECCHHHHHHHHH
T ss_conf 58999999999889989998249999-------------999999-73999999689999999872
Done!