Your job contains 1 sequence.
>003551
MISLTDICMKPLGQDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKG
PLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPM
VQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSK
VLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQ
LELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQ
ITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILS
LWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLY
FVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWI
SPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGVCKDCTTCFHHSDLLKDRPSTIQ
FKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNS
MRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCS
FWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSG
DKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGL
VFLPVVLSVFGPPSRCMLVERQEERPSVSSL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003551
(811 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035878 - symbol:AT1G42470 species:3702 "Arabi... 2827 2.0e-294 1
UNIPROTKB|F1NQT4 - symbol:NPC1 "Uncharacterized protein" ... 1247 5.3e-127 1
ZFIN|ZDB-GENE-030131-3161 - symbol:npc1 "Niemann-Pick dis... 1241 2.3e-126 1
UNIPROTKB|B0JYK2 - symbol:NPC1 "Uncharacterized protein" ... 1196 1.3e-121 1
ASPGD|ASPL0000051085 - symbol:AN2119 species:162425 "Emer... 786 6.5e-119 2
UNIPROTKB|G3V7K5 - symbol:Cdig2 "RCG41239" species:10116 ... 1169 9.8e-119 1
MGI|MGI:1097712 - symbol:Npc1 "Niemann Pick type C1" spec... 1160 8.8e-118 1
UNIPROTKB|F1SBB5 - symbol:NPC1 "Niemann-Pick C1 protein" ... 1157 1.8e-117 1
UNIPROTKB|P56941 - symbol:NPC1 "Niemann-Pick C1 protein" ... 1157 1.8e-117 1
UNIPROTKB|Q9JLG3 - symbol:NPC1 "Niemann-Pick type C1 prot... 1151 7.9e-117 1
RGD|1303135 - symbol:Npc1l1 "NPC1-like 1" species:10116 "... 1107 1.1e-116 2
UNIPROTKB|Q9TT75 - symbol:NPC1 "Niemann-Pick type C1 dise... 1147 2.1e-116 1
UNIPROTKB|B4DET3 - symbol:NPC1 "Niemann-Pick C1 protein" ... 1101 2.3e-116 2
UNIPROTKB|K7EQ23 - symbol:NPC1 "Niemann-Pick C1 protein" ... 1101 2.3e-116 2
FB|FBgn0024320 - symbol:Npc1a "Niemann-Pick type C-1a" sp... 741 4.2e-116 2
DICTYBASE|DDB_G0269158 - symbol:npcA "Niemann-Pick C type... 511 4.3e-116 3
UNIPROTKB|O15118 - symbol:NPC1 "Niemann-Pick C1 protein" ... 1135 3.9e-115 1
MGI|MGI:2685089 - symbol:Npc1l1 "NPC1-like 1" species:100... 1088 1.4e-114 2
UNIPROTKB|F1SSH5 - symbol:NPC1L1 "Uncharacterized protein... 1073 4.3e-113 2
DICTYBASE|DDB_G0276657 - symbol:npcB "Niemann-Pick C type... 482 1.4e-112 4
CGD|CAL0003873 - symbol:NCR1 species:5476 "Candida albica... 980 7.1e-111 2
UNIPROTKB|E1BPS5 - symbol:NPC1L1 "Uncharacterized protein... 1054 1.9e-110 2
FB|FBgn0261675 - symbol:Npc1b "Niemann-Pick type C-1b" sp... 1060 3.5e-107 1
UNIPROTKB|G4NE97 - symbol:MGG_00819 "Niemann-Pick C1 prot... 597 2.6e-103 2
UNIPROTKB|B7ZLE6 - symbol:NPC1L1 "Niemann-Pick C1-like pr... 597 4.1e-103 3
UNIPROTKB|Q8MKD8 - symbol:Q8MKD8 "Niemann-Pick C1" specie... 994 3.4e-100 1
UNIPROTKB|Q9N0Q0 - symbol:NPC1 "Niemann-Pick type C1 dise... 994 3.4e-100 1
UNIPROTKB|Q8MI49 - symbol:Q8MI49 "Mutant Niemann-Pick C1"... 984 3.9e-99 1
UNIPROTKB|F1PB50 - symbol:NPC1 "Uncharacterized protein" ... 973 5.8e-98 1
UNIPROTKB|Q9UHC9 - symbol:NPC1L1 "Niemann-Pick C1-like pr... 781 3.6e-80 2
SGD|S000005927 - symbol:NCR1 "Vacuolar membrane protein" ... 426 3.2e-76 3
WB|WBGene00003561 - symbol:ncr-1 species:6239 "Caenorhabd... 558 3.0e-56 2
UNIPROTKB|J9PBB6 - symbol:J9PBB6 "Uncharacterized protein... 551 3.0e-53 1
WB|WBGene00003562 - symbol:ncr-2 species:6239 "Caenorhabd... 535 3.0e-49 1
ZFIN|ZDB-GENE-980526-196 - symbol:ptch1 "patched 1" speci... 280 4.1e-43 3
UNIPROTKB|F1PNE0 - symbol:PTCH1 "Uncharacterized protein"... 287 5.5e-43 3
UNIPROTKB|F1NYG9 - symbol:PTCH1 "Protein patched homolog ... 289 7.1e-43 3
MGI|MGI:105373 - symbol:Ptch1 "patched homolog 1" species... 290 8.1e-43 3
UNIPROTKB|Q90693 - symbol:PTCH1 "Protein patched homolog ... 289 1.1e-42 3
UNIPROTKB|Q6UY90 - symbol:Ptch1 "Protein Ptch1" species:1... 287 1.1e-42 3
UNIPROTKB|Q13635 - symbol:PTCH1 "Protein patched homolog ... 289 2.3e-42 3
UNIPROTKB|I3LVF2 - symbol:PTCH1 "Uncharacterized protein"... 287 3.8e-42 3
ZFIN|ZDB-GENE-980526-44 - symbol:ptch2 "patched 2" specie... 272 5.1e-41 3
UNIPROTKB|E1B778 - symbol:PTCH2 "Uncharacterized protein"... 279 2.6e-39 3
UNIPROTKB|E2RHI9 - symbol:PTCH2 "Uncharacterized protein"... 280 3.3e-39 3
MGI|MGI:1095405 - symbol:Ptch2 "patched homolog 2" specie... 277 1.3e-38 3
UNIPROTKB|Q9Y6C5 - symbol:PTCH2 "Protein patched homolog ... 277 7.3e-38 4
UNIPROTKB|K7ERM4 - symbol:NPC1 "Niemann-Pick C1 protein" ... 393 1.0e-35 1
UNIPROTKB|F1LW60 - symbol:F1LW60 "Uncharacterized protein... 230 8.6e-34 2
ZFIN|ZDB-GENE-041210-239 - symbol:si:ch211-250m6.7 "si:ch... 221 6.1e-32 3
WB|WBGene00000902 - symbol:daf-6 species:6239 "Caenorhabd... 204 5.6e-30 3
MGI|MGI:1921925 - symbol:Ptchd3 "patched domain containin... 207 4.9e-29 2
UNIPROTKB|F1MMY0 - symbol:PTCHD3 "Uncharacterized protein... 211 6.5e-29 2
UNIPROTKB|K7ERW2 - symbol:NPC1 "Niemann-Pick C1 protein" ... 323 3.9e-28 1
WB|WBGene00004208 - symbol:ptc-1 species:6239 "Caenorhabd... 241 4.9e-27 4
WB|WBGene00004209 - symbol:ptc-2 species:6239 "Caenorhabd... 222 1.1e-26 2
WB|WBGene00004233 - symbol:ptr-19 species:6239 "Caenorhab... 200 1.8e-26 2
WB|WBGene00004217 - symbol:ptr-2 species:6239 "Caenorhabd... 218 6.6e-26 2
WB|WBGene00004210 - symbol:ptc-3 species:6239 "Caenorhabd... 228 2.2e-25 3
WB|WBGene00004224 - symbol:ptr-10 species:6239 "Caenorhab... 186 2.4e-25 3
FB|FBgn0262867 - symbol:Ptr "Patched-related" species:722... 193 1.3e-24 3
WB|WBGene00004216 - symbol:ptr-1 species:6239 "Caenorhabd... 197 7.1e-23 4
UNIPROTKB|F1MVV4 - symbol:PTCH1 "Uncharacterized protein"... 272 1.2e-22 3
WB|WBGene00004231 - symbol:ptr-17 species:6239 "Caenorhab... 160 8.7e-21 3
WB|WBGene00004229 - symbol:ptr-15 species:6239 "Caenorhab... 173 2.3e-19 2
FB|FBgn0003892 - symbol:ptc "patched" species:7227 "Droso... 160 1.2e-18 3
WB|WBGene00004232 - symbol:ptr-18 species:6239 "Caenorhab... 188 1.4e-18 3
WB|WBGene00004230 - symbol:ptr-16 species:6239 "Caenorhab... 192 1.5e-18 2
WB|WBGene00004223 - symbol:ptr-9 species:6239 "Caenorhabd... 163 1.2e-17 2
RGD|621425 - symbol:Ptch1 "patched 1" species:10116 "Ratt... 248 1.3e-17 1
WB|WBGene00004221 - symbol:ptr-6 species:6239 "Caenorhabd... 149 2.0e-15 3
UNIPROTKB|I3LN22 - symbol:PTCHD3 "Uncharacterized protein... 182 6.0e-15 2
UNIPROTKB|H9L1J3 - symbol:H9L1J3 "Uncharacterized protein... 197 1.4e-14 1
WB|WBGene00004228 - symbol:ptr-14 species:6239 "Caenorhab... 157 1.8e-14 2
WB|WBGene00004225 - symbol:ptr-11 species:6239 "Caenorhab... 148 2.7e-14 2
UNIPROTKB|F1P513 - symbol:F1P513 "Uncharacterized protein... 219 3.3e-14 1
UNIPROTKB|G3N231 - symbol:PTCHD3 "Uncharacterized protein... 214 8.9e-14 1
UNIPROTKB|H0Y3B8 - symbol:PTCH1 "Protein patched homolog ... 201 4.1e-13 1
UNIPROTKB|H3BLX7 - symbol:PTCH1 "Protein patched homolog ... 203 6.6e-13 1
WB|WBGene00004236 - symbol:ptr-22 species:6239 "Caenorhab... 140 7.9e-13 2
UNIPROTKB|G3N1D5 - symbol:G3N1D5 "Uncharacterized protein... 203 9.0e-13 1
WB|WBGene00004220 - symbol:ptr-5 species:6239 "Caenorhabd... 153 2.8e-12 2
WB|WBGene00004226 - symbol:ptr-12 species:6239 "Caenorhab... 139 2.3e-11 2
WB|WBGene00004234 - symbol:ptr-20 species:6239 "Caenorhab... 150 3.6e-11 3
WB|WBGene00004227 - symbol:ptr-13 species:6239 "Caenorhab... 131 7.1e-11 2
WB|WBGene00004222 - symbol:ptr-8 species:6239 "Caenorhabd... 160 1.6e-10 2
UNIPROTKB|E2RPY7 - symbol:PTCHD4 "Uncharacterized protein... 141 6.1e-10 3
WB|WBGene00004237 - symbol:ptr-23 species:6239 "Caenorhab... 139 1.3e-09 2
UNIPROTKB|F6PVM2 - symbol:C23H6orf138 "Uncharacterized pr... 134 1.7e-09 3
UNIPROTKB|Q6ZW05 - symbol:PTCHD4 "Patched domain-containi... 130 2.3e-09 3
MGI|MGI:1920485 - symbol:Ptchd4 "patched domain containin... 138 2.7e-09 2
WB|WBGene00004218 - symbol:ptr-3 species:6239 "Caenorhabd... 141 3.5e-09 2
UNIPROTKB|Q3KNS1 - symbol:PTCHD3 "Patched domain-containi... 172 3.5e-09 1
RGD|1563020 - symbol:Ptchd4 "patched domain containing 4"... 135 3.6e-09 2
UNIPROTKB|E1BW67 - symbol:C6orf138 "Uncharacterized prote... 128 4.6e-09 2
WB|WBGene00004235 - symbol:ptr-21 species:6239 "Caenorhab... 119 1.1e-08 2
UNIPROTKB|G3N0B8 - symbol:PTCH1 "Uncharacterized protein"... 160 2.1e-08 1
WB|WBGene00004219 - symbol:ptr-4 species:6239 "Caenorhabd... 113 5.5e-08 3
UNIPROTKB|I3LPG5 - symbol:PTCHD4 "Uncharacterized protein... 140 1.7e-07 3
UNIPROTKB|Q8EDZ6 - symbol:SO_2594 "MMPL family efflux pum... 128 3.8e-06 4
WARNING: Descriptions of 19 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2035878 [details] [associations]
symbol:AT1G42470 species:3702 "Arabidopsis thaliana"
[GO:0008158 "hedgehog receptor activity" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 EMBL:CP002684 GO:GO:0005886 GO:GO:0009506
GO:GO:0030301 GO:GO:0008158 KO:K12385 TIGRFAMs:TIGR00917
IPI:IPI00535281 RefSeq:NP_174975.2 UniGene:At.39097
ProteinModelPortal:F4I9G5 SMR:F4I9G5 PRIDE:F4I9G5
EnsemblPlants:AT1G42470.1 GeneID:840851 KEGG:ath:AT1G42470
OMA:WVARHPT Uniprot:F4I9G5
Length = 1272
Score = 2827 (1000.2 bits), Expect = 2.0e-294, P = 2.0e-294
Identities = 540/717 (75%), Positives = 612/717 (85%)
Query: 1 MISLTDICMKPLGQDCATQSVLQ-YFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFK 59
M+SLTDICMKPLG+DCATQSVLQ YFKM P+N+DD+GGV+HVKYCF+H+TSTESC+SAFK
Sbjct: 449 MVSLTDICMKPLGEDCATQSVLQQYFKMKPENYDDYGGVDHVKYCFEHFTSTESCLSAFK 508
Query: 60 GPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLP 119
GPLDP+TALGGFSGN++SEASAF+VTYPV+N VD +GN+T+KAVAWEKAF+QLAKDELLP
Sbjct: 509 GPLDPTTALGGFSGNSFSEASAFLVTYPVDNFVDNKGNKTEKAVAWEKAFIQLAKDELLP 568
Query: 120 MVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXX 179
MVQ+KNLTL+FSSESSIEEELKRESTAD ITI ISYLVMFAYISLTLGD+P L SFYI
Sbjct: 569 MVQAKNLTLSFSSESSIEEELKRESTADVITIAISYLVMFAYISLTLGDSPRLKSFYITS 628
Query: 180 XXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ 239
FFSA+G+KSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ
Sbjct: 629 KVLLGLSGVLLVMLSVLGSVGFFSAVGMKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ 688
Query: 240 QLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXX 299
+ ELPLE RISNAL+EVGPSITLASL+E+LAFAVG+FI MPA RVFSM
Sbjct: 689 EQELPLERRISNALMEVGPSITLASLAEILAFAVGAFIKMPAVRVFSMFAALAVLLDFLL 748
Query: 300 QITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATIL 359
QITAFVALIVFDF R EDKRVDC PC+K S S ++KG+GQRK GLL RYMKEVHA +L
Sbjct: 749 QITAFVALIVFDFRRTEDKRVDCFPCIKTSKSSISAEKGVGQRKAGLLTRYMKEVHAPVL 808
Query: 360 SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 419
S W VKI VI+ F +A IAL TRIEPGLEQ+IVLP+DSYLQGYFNNIS +LRIGPPL
Sbjct: 809 SHWIVKIVVIAFFFGLAMAGIALSTRIEPGLEQQIVLPQDSYLQGYFNNISTYLRIGPPL 868
Query: 420 YFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVW 479
YFV+KNYNYSSESR TNQLCSI++C+ NSLLNEI+RASL P+ SYIAKPAASWLDDFLVW
Sbjct: 869 YFVLKNYNYSSESRHTNQLCSINKCNPNSLLNEIARASLTPELSYIAKPAASWLDDFLVW 928
Query: 480 ISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPSTI 539
+SPEAFGCCRKFTNG++ + VCKDCTTCF H+DL DRPST
Sbjct: 929 LSPEAFGCCRKFTNGTFCPPDDQPPCCPPGQTSCGLSEVCKDCTTCFRHADLSSDRPSTT 988
Query: 540 QFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVN 599
QFKEKLPWFLNALPSA CAKGGHGAY++SVDL+GY NGI+QASSFRTYHTPLN+Q+D+VN
Sbjct: 989 QFKEKLPWFLNALPSADCAKGGHGAYSSSVDLQGYANGIIQASSFRTYHTPLNKQVDFVN 1048
Query: 600 SMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTC 659
SMRAA+EFS++VS SL+MEI+PYSVFYM+FEQYLDIW+TALINL+IAI AVFVVCLI TC
Sbjct: 1049 SMRAAQEFSAKVSRSLKMEIYPYSVFYMFFEQYLDIWKTALINLSIAIAAVFVVCLIITC 1108
Query: 660 SFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFS 716
SFWSSAIILLV+ MI++DL+GVMA+ IQLNA+SVVNL+M+VGIAVEFCVHITHAFS
Sbjct: 1109 SFWSSAIILLVIAMIIIDLLGVMAVFHIQLNALSVVNLIMSVGIAVEFCVHITHAFS 1165
>UNIPROTKB|F1NQT4 [details] [associations]
symbol:NPC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=IEA] [GO:0016242
"negative regulation of macroautophagy" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0033344 "cholesterol efflux"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0071383 "cellular response
to steroid hormone stimulus" evidence=IEA] [GO:0071404 "cellular
response to low-density lipoprotein particle stimulus"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0005768 GO:GO:0006914 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0033344 GO:GO:0031982
GO:GO:0008158 GO:GO:0071383 GO:GO:0016242 GO:GO:0071404
GeneTree:ENSGT00680000099777 OMA:DGYDLVQ TIGRFAMs:TIGR00917
EMBL:AADN02021353 IPI:IPI00572808 Ensembl:ENSGALT00000024240
Uniprot:F1NQT4
Length = 1278
Score = 1247 (444.0 bits), Expect = 5.3e-127, P = 5.3e-127
Identities = 293/797 (36%), Positives = 445/797 (55%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFK-----MDPKNFDDFGGVE----HVKYCFQ--- 46
++L DIC+ PL +C SVL YF+ +D DDF H YC +
Sbjct: 463 VTLKDICLAPLAPYNNNCTILSVLNYFQNSHSVLDHSVGDDFFVYADYHTHFLYCVRAPA 522
Query: 47 --HYTST--ESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKA 102
+ TS + C+ AF GP+ P LGG+ G+NY+ A+A V+T PVNN + + + KA
Sbjct: 523 SLNDTSLLHDPCLGAFGGPVFPWLVLGGYDGDNYNNATALVITLPVNNYYN-DSKKIMKA 581
Query: 103 VAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
+AWEK F+ K+ + NLT++FS+E SIE+E+ RES +D T+VISY+VMF YI
Sbjct: 582 LAWEKEFINFLKN-----YDNPNLTISFSAERSIEDEINRESRSDVSTVVISYVVMFVYI 636
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
S+ LG + FS GV TLI+ EVIPFLVL
Sbjct: 637 SIALGHIQSWGRLLVDSKISLGIAGILIVLSSVACSIGIFSYFGVPVTLIVAEVIPFLVL 696
Query: 223 AVGVDNMCILVHAVKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
A+GVDN+ I+V ++R ++LE L+ +I L +V PS+ L+S SE +AF +G+ MP
Sbjct: 697 AIGVDNLFIIVQTLQRDERLEGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMP 756
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A R FS+ Q+T FV+L+ D R E R+D + C+K S +G+
Sbjct: 757 AVRTFSLFAGMAVLIDFILQVTCFVSLLGLDIRRQERNRLDILCCIKGSEEM----RGV- 811
Query: 341 QRKPGLLARYMKEVHAT-ILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRD 399
QR +L + K +++ +L W ++ VI+LFV S A+ +E GL+Q + +P D
Sbjct: 812 QRSESILFLFFKNLYSPYLLKDW-MRPIVIALFVGLLSFSTAVIHNVEIGLDQSLSMPDD 870
Query: 400 SYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASL 458
SY+ YF + +++ GPP+YFV++ +NY+S Q N +C + C+++SL+ ++ A+
Sbjct: 871 SYVMNYFKQLGKYMHAGPPVYFVLEEGHNYTSLEGQ-NMVCGGTGCNNDSLVQQVFNAAE 929
Query: 459 IPQSSYIAKPAASWLDDFLVWISPEAFGCCRKF-TNGSYXXXXXXXXXXXXXXXXXXXAG 517
I + I +SW+DD+ W+ P++ CCR + T G +
Sbjct: 930 ISSYTRIGYAPSSWIDDYFDWVKPQS-SCCRVYNTTGQFCNASVTD-------------- 974
Query: 518 VCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDL-KGYEN 576
CT C S K RP F LP FL+ P+ C KGGH AY+++VDL K +
Sbjct: 975 --PSCTRCRPLSQEGKQRPQGEDFMTFLPMFLSDNPNPKCGKGGHAAYSSAVDLIKNKTD 1032
Query: 577 -GIVQASSFRTYHTPLNRQIDYVNSMR-AAREFSSRVS-DSLQMEIFPYSVFYMYFEQYL 633
G ++ T + ID + R A + + +FPYSVFY+++EQYL
Sbjct: 1033 VGATYFMTYHTVLKKSSDYIDAMKKARDIADNITETMGIKEKNYRVFPYSVFYVFYEQYL 1092
Query: 634 DIWRTALINLAIAIGAVFVV-CLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAV 692
I A+ NL I++G++F+V ++ W++ ++ + + MI+V++ GVM + I LNAV
Sbjct: 1093 TIVNDAIFNLCISLGSIFLVTAVLLGFEVWAAVVVTVTIAMIIVNMFGVMWLWGISLNAV 1152
Query: 693 SVVNLVMAVGIAVEFCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIV 751
S+VNLVM+ GIAVEFC H+T AF+VS+ G + +R +EAL MG+SVFSGITLTK G++V
Sbjct: 1153 SLVNLVMSCGIAVEFCSHVTRAFTVSTKGSRVERAEEALSHMGSSVFSGITLTKFGGIVV 1212
Query: 752 LCFSRTEVFVVYYFQMY 768
L FS++++F ++YF+MY
Sbjct: 1213 LAFSKSQIFKIFYFRMY 1229
>ZFIN|ZDB-GENE-030131-3161 [details] [associations]
symbol:npc1 "Niemann-Pick disease, type C1"
species:7955 "Danio rerio" [GO:0030301 "cholesterol transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0006869 "lipid transport" evidence=ISS]
[GO:0055113 "epiboly involved in gastrulation with mouth forming
second" evidence=IMP] [GO:0035855 "megakaryocyte development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 ZFIN:ZDB-GENE-030131-3161
GO:GO:0016021 GO:GO:0006869 GO:GO:0001666 GO:GO:0055113
GO:GO:0030301 GO:GO:0008158 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00917 EMBL:FP236166 EMBL:FP245481 IPI:IPI00861743
Ensembl:ENSDART00000103596 ArrayExpress:F1QNG7 Bgee:F1QNG7
Uniprot:F1QNG7
Length = 1276
Score = 1241 (441.9 bits), Expect = 2.3e-126, P = 2.3e-126
Identities = 291/797 (36%), Positives = 447/797 (56%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFK-----MDPKNFDDFGGVE----HVKYCFQHYT 49
++L DIC+ PL +C SVL YF+ +D + D+F H+ YC T
Sbjct: 464 VTLKDICVSPLSPYNDNCTILSVLNYFQNSHEVLDHEFQDEFFLYNDYHTHLLYCASSPT 523
Query: 50 STES-------CMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKA 102
S + CM F GP+ P LGG+ + Y+ A+A V+T+PV N ++ + + KA
Sbjct: 524 SLDDTSRLHDPCMGTFGGPVFPWLVLGGYEDSAYNNATALVITFPVTNYLN-DTEKLGKA 582
Query: 103 VAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
+AWEK F++ K+ ++ NLT++FSSE SIE+E+ RES +D TIVISY++MF YI
Sbjct: 583 LAWEKEFIRFMKN-----YENPNLTVSFSSERSIEDEIDRESNSDVSTIVISYIIMFVYI 637
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
S+ LG + + FS IG+ TLI++EVIPFLVL
Sbjct: 638 SVALGRINSCRTLLVDSKISLGIAGILIVLSSVACSLGIFSYIGIPLTLIVIEVIPFLVL 697
Query: 223 AVGVDNMCILVHAVKRQQL--ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ I+V +R + E L +I L +V PS+ L+S SE +AF +G+ MP
Sbjct: 698 AVGVDNIFIIVQTYQRDERMPEEELHQQIGRILGDVAPSMFLSSFSETVAFFLGALSTMP 757
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A R FS+ QI+ FV+L+ D R E R+D + C+KLS G
Sbjct: 758 AVRTFSLFAGLAIFIDFLLQISCFVSLLGLDIKRQEANRMDILCCVKLSD-------GQE 810
Query: 341 QRKPGLLARYMKEVHAT-ILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRD 399
++ G L R+ K+++A IL W V+ V+++FV SIA+ ++E GLEQ + +P D
Sbjct: 811 EKSEGWLFRFFKKIYAPFILKDW-VRPLVVAVFVGMLSFSIAVVNKVEIGLEQTLSMPDD 869
Query: 400 SYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASL 458
SY+ YF N+S++L GPP+YFVV++ ++Y + Q N +C C+++SL+ +I ASL
Sbjct: 870 SYVLNYFGNLSKYLHTGPPVYFVVEDGHDYKTFEGQ-NAVCGGVGCNNDSLVQQIYTASL 928
Query: 459 IPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTN-GSYXXXXXXXXXXXXXXXXXXXAG 517
+ + I+ +SWLDD+ W+ P++ CCR + + G++
Sbjct: 929 MSNYTRISNVPSSWLDDYFDWVKPQST-CCRYYNSTGAFCNASV---------------- 971
Query: 518 VCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYEN- 576
V K C C + K RP+ +F LP FL+ P+ C KGGH AY +VDLK
Sbjct: 972 VDKSCVHCRPMTSSGKQRPNGTEFMHFLPMFLSDNPNIKCGKGGHAAYGTAVDLKDNNTD 1031
Query: 577 -GIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRV--SDSLQMEIFPYSVFYMYFEQYL 633
G S+ T + I+ + R + ++ + ++FPYSVFY+++EQYL
Sbjct: 1032 VGATYFMSYHTILKNSSDFINAMKMARELTDNITQTLSTHDKSYKVFPYSVFYVFYEQYL 1091
Query: 634 DIWRTALINLAIAIGAVFVV-CLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAV 692
I +NL +++ A+F+V ++ WS+ ++ + MI++++ GVM + I LNAV
Sbjct: 1092 TIVDDTALNLGVSLSAIFIVTAVLLGFELWSAVLVCFTIAMILINMFGVMWLWSISLNAV 1151
Query: 693 SVVNLVMAVGIAVEFCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIV 751
S+VNLVM+ GI+VEFC HI AFS+S+ + +R +EAL MG+SVFSGITLTK G+++
Sbjct: 1152 SLVNLVMSCGISVEFCSHIVRAFSISTRSSRVERAEEALAHMGSSVFSGITLTKFGGILI 1211
Query: 752 LCFSRTEVFVVYYFQMY 768
L S++++F ++YF+MY
Sbjct: 1212 LALSKSQIFQIFYFRMY 1228
>UNIPROTKB|B0JYK2 [details] [associations]
symbol:NPC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071404 "cellular response to low-density lipoprotein
particle stimulus" evidence=IEA] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0033344 "cholesterol efflux" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0016242 "negative regulation of
macroautophagy" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0005768 GO:GO:0006914 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0033344 GO:GO:0031982
GO:GO:0007628 GO:GO:0008158 GO:GO:0071383 GO:GO:0016242
GO:GO:0071404 eggNOG:NOG149152 GeneTree:ENSGT00680000099777
OMA:DGYDLVQ HOVERGEN:HBG003913 OrthoDB:EOG46DM1Z TIGRFAMs:TIGR00917
HOGENOM:HOG000036674 EMBL:DAAA02056610 EMBL:DAAA02056611
EMBL:BC151276 IPI:IPI00698823 UniGene:Bt.7157 STRING:B0JYK2
Ensembl:ENSBTAT00000020219 InParanoid:B0JYK2 Uniprot:B0JYK2
Length = 1277
Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
Identities = 283/795 (35%), Positives = 438/795 (55%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFK-----MDPKNFDDFGGVE----HVKYCFQ--- 46
++L DIC+ PL Q+C SVL YF+ +D + DDF H YC +
Sbjct: 462 VTLRDICVAPLSPYNQNCTILSVLNYFQNSHSVLDHQVGDDFFVYADYHTHFLYCVRAPA 521
Query: 47 --HYTST--ESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKA 102
+ TS + C+ F GP+ P LGG+ NY+ A+A V+T+PVNN + + + ++A
Sbjct: 522 SLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYN-DTEKLQRA 580
Query: 103 VAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
AWE+ F+ ++ ++ NLT++F +E SIE+EL RES +D T++ISY VMF YI
Sbjct: 581 QAWEREFINFVQN-----YENPNLTISFKAERSIEDELNRESNSDVFTVLISYGVMFLYI 635
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
S+ LG + FS IGV TLI++EVIPFLVL
Sbjct: 636 SIALGHIKSCRRLLVDSKISLGIAGVLIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVL 695
Query: 223 AVGVDNMCILVHAVKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ ILV +R ++L+ L+ ++ L EV PS+ L+S +E +AF +G MP
Sbjct: 696 AVGVDNIFILVQTYQRDERLQGETLDQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVMP 755
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A FS+ QIT FV+L+ D R E ++D + C+ AD D GI
Sbjct: 756 AVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNQLDVLCCV---GGAAD-DAGI- 810
Query: 341 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
Q L R+ + +A +L ++ V+++FV SIA+ ++E GL+Q + +P DS
Sbjct: 811 QASESCLFRFFRNSYAPLLLKDWMRPLVVAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDS 870
Query: 401 YLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLI 459
Y+ YF +++++L GPP+YFV++ ++Y+S Q N +C C+++SL+ ++ A+ +
Sbjct: 871 YVTDYFQSLNQYLHAGPPVYFVLEEGHDYTSTKGQ-NMVCGGLGCNNDSLVQQVFTAAQL 929
Query: 460 PQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVC 519
+ I +SW+DD+ W+ P++ CCR + + V
Sbjct: 930 DSYTRIGFAPSSWIDDYFDWVKPQS-SCCRIYNSTEQFCNASV---------------VN 973
Query: 520 KDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDL--KGYENG 577
C C + K RP F LP FL+ P+ C KGGH AY+ +V++ G G
Sbjct: 974 PTCVRCRPLTPEGKQRPQGADFMRFLPMFLSDNPNPKCGKGGHAAYSAAVNILDNGTRVG 1033
Query: 578 IVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSL--QMEIFPYSVFYMYFEQYLDI 635
++ T ID + R +R + +FPYSVFY+++EQYL +
Sbjct: 1034 ATYFMTYHTVLQTSADFIDAMEKARLIASNITRTMNQQGGDHRVFPYSVFYVFYEQYLTM 1093
Query: 636 WRTALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSV 694
+ NL++++GA+F+V ++ C WS+ I+ + MI+V++ GVM + I LNAVS+
Sbjct: 1094 IDDTIFNLSVSLGAIFLVAVVLLGCELWSAVIMCATIAMILVNMFGVMWLWGISLNAVSL 1153
Query: 695 VNLVMAVGIAVEFCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIVLC 753
VNLVM+ GI+VEFC HIT AF+VS+ G + +R +EAL MG+SVFSGITLTK G+IVL
Sbjct: 1154 VNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALSHMGSSVFSGITLTKFGGIIVLA 1213
Query: 754 FSRTEVFVVYYFQMY 768
F+++++F ++YF+MY
Sbjct: 1214 FAKSQIFQIFYFRMY 1228
>ASPGD|ASPL0000051085 [details] [associations]
symbol:AN2119 species:162425 "Emericella nidulans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030301 "cholesterol
transport" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IDA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IEA] [GO:0046624 "sphingolipid transporter activity"
evidence=IEA] [GO:0006665 "sphingolipid metabolic process"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
EMBL:BN001307 EMBL:AACD01000032 GO:GO:0030301 GO:GO:0008158
eggNOG:NOG149152 KO:K12385 TIGRFAMs:TIGR00917 HOGENOM:HOG000036674
OrthoDB:EOG48D43G RefSeq:XP_659723.1 ProteinModelPortal:Q5BBG1
EnsemblFungi:CADANIAT00008794 GeneID:2875771 KEGG:ani:AN2119.2
OMA:ERDERAW Uniprot:Q5BBG1
Length = 1271
Score = 786 (281.7 bits), Expect = 6.5e-119, Sum P(2) = 6.5e-119
Identities = 180/506 (35%), Positives = 273/506 (53%)
Query: 2 ISLTDICMKPLGQDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGP 61
+SL DIC KP G C QSV YF N D + + +C SC+ F P
Sbjct: 450 LSLDDICYKPTGDACVIQSVTGYFGGSLSNLDPDTWQDRLTHCASS-PGDASCLPDFSQP 508
Query: 62 LDPSTALGGFSGN-NYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAF---VQLAKDEL 117
L P LGG+ + N +A A +VT+ VNN E + A+ WE F Q+ ++E
Sbjct: 509 LRPEMILGGYEDSGNVLDAKALIVTWVVNNHAPGSEEEAE-AIDWEDTFRGIFQVVQEE- 566
Query: 118 LPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTP------- 170
+++ L ++F++E+S+E+EL + S DA +VISY++MF Y SL LG
Sbjct: 567 ---AKNRGLRVSFTTEASVEQELNKSSNTDAKIVVISYIIMFIYASLALGSVTMTWRSLI 623
Query: 171 -HLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNM 229
+ ++ + FSA GVK TLII EVIPFLVLAVGVDN+
Sbjct: 624 NNPANALVQSKFTLGVVGIVIVLMSVSASVGLFSAAGVKVTLIIAEVIPFLVLAVGVDNI 683
Query: 230 CILVHAVKRQQLELP---LETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFS 286
++V+ +R + P ++ RIS A+ +GPSI L++++E +AFA+G F+ MPA R F+
Sbjct: 684 FLIVYEFERLNVSHPDEEIDERISRAIGRIGPSIFLSAITETVAFALGVFVGMPAVRNFA 743
Query: 287 MXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG---QRK 343
+ QIT FV+++ + R E R DCIPCL + +++ + + Q +
Sbjct: 744 IYAAGAVFINAVLQITMFVSVLALNQKRVESLRADCIPCLTVRKAHSGMPEDLAFDDQDR 803
Query: 344 PGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQ 403
G+L +++++V+A +L VK+ V+ F+ A +AL + GL+Q+I LP DSYL
Sbjct: 804 EGILQKFIRKVYAPLLLNRRVKVVVVITFLGILAAGLALTPEVAMGLDQRIALPSDSYLI 863
Query: 404 GYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCS-ISQCDSNSLLNEISRASLIPQS 462
YF+++SE+ GPP+YFV +N N + Q QLC + C+ SL + + S
Sbjct: 864 DYFDDLSEYFNSGPPVYFVTRNVNITKREHQ-RQLCGRFTTCEEYSLPFVLEQESKRSNV 922
Query: 463 SYIAKPAASWLDDFLVWISPEAFGCC 488
SYIA ASW+DDF W++P+ CC
Sbjct: 923 SYIAGATASWIDDFFYWLNPQQ-DCC 947
Score = 420 (152.9 bits), Expect = 6.5e-119, Sum P(2) = 6.5e-119
Identities = 99/271 (36%), Positives = 145/271 (53%)
Query: 532 LKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPL 591
L P +F L ++ + ASC GG Y+N++ + AS FRT HTPL
Sbjct: 966 LTGMPEGAEFIHYLEKWIKSPTDASCPLGGKAPYSNALVFDP-KRITTNASHFRTSHTPL 1024
Query: 592 NRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVF 651
Q D++ S +AR + +S +++FPYS Y++F+QY+ I + A L A+ +F
Sbjct: 1025 RTQDDFIKSYISARRIADGLSAEHGIDVFPYSKTYIFFDQYVSIVQVAGTLLGSAVAIIF 1084
Query: 652 VVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHI 711
+ I S + A++ + MIV+D++G MAI + LNAVS+VNLV+ VGI VEFC HI
Sbjct: 1085 AITSILLGSVATGAVVTATVIMIVIDIIGSMAISGVSLNAVSLVNLVICVGIGVEFCAHI 1144
Query: 712 THAFSVSSGD-----------KNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVF 760
AF S K+ R AL +G SVFSGIT+TKL+GV VL F+R+++F
Sbjct: 1145 ARAFMFPSRSIMEIVPSKFRGKDARSWTALVNVGGSVFSGITVTKLLGVCVLAFTRSKIF 1204
Query: 761 VVYYFQMYXXXXXXXXXXXXXXXXXXXSVFG 791
+YYF+++ S FG
Sbjct: 1205 EIYYFRVWLALIIFAATHALIFLPVALSYFG 1235
>UNIPROTKB|G3V7K5 [details] [associations]
symbol:Cdig2 "RCG41239" species:10116 "Rattus norvegicus"
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0015485
"cholesterol binding" evidence=IEA] [GO:0016242 "negative
regulation of macroautophagy" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0033344 "cholesterol efflux" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0045121 "membrane
raft" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=IEA] [GO:0071404 "cellular response to
low-density lipoprotein particle stimulus" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0030301
GO:GO:0008158 GeneTree:ENSGT00680000099777 KO:K12385 OMA:DGYDLVQ
CTD:4864 TIGRFAMs:TIGR00917 EMBL:CH474073 RefSeq:NP_705888.2
UniGene:Rn.115253 PRIDE:G3V7K5 Ensembl:ENSRNOT00000016167
GeneID:266732 KEGG:rno:266732 NextBio:624576 Uniprot:G3V7K5
Length = 1278
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 282/797 (35%), Positives = 440/797 (55%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAF 58
++L DIC+ PL ++C SVL YF+ D+ G + Y H T C+ A
Sbjct: 463 VTLQDICVAPLSPYNKNCTIMSVLNYFQNSHAVLDNQVGDDFFVYADYH-THFLYCVRAP 521
Query: 59 KGPLDPST----ALGGFSG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAW 105
D S LG F G Y + + T + V+ N+T+K
Sbjct: 522 ASLNDTSLLHGPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKL--- 578
Query: 106 EKAFVQLAKDELLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
++A+ + E + V++ NLT++F++E SIE+EL RES +D T++ISY VMF YI
Sbjct: 579 QRAWAW--EKEFINFVKNYKNPNLTISFTAERSIEDELNRESNSDVFTVLISYAVMFLYI 636
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
SL LG + + FS IG+ TLI++EVIPFLVL
Sbjct: 637 SLALGHIQSWNRVLVDSKISLGIAGILIVLSSVTCSLGIFSYIGMPLTLIVIEVIPFLVL 696
Query: 223 AVGVDNMCILVHAVKRQQL--ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ ILV +R + E L+ ++ L EV P++ L+S SE AF G+ MP
Sbjct: 697 AVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMP 756
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A FS+ QIT FV+ + D R E R+D + C++ D
Sbjct: 757 AVHTFSLFAGMAVLIDFLLQITCFVSFLGLDIKRQEKNRLDILCCVR-----GPDDGQES 811
Query: 341 QRKPGLLARYMKEVHAT-ILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRD 399
Q L R+ K A +L+ W ++ V+++FV SIA+ ++E GL+Q + +P D
Sbjct: 812 QASESYLFRFFKNAFAPFLLTDW-LRPVVMAVFVGILSFSIAVVNKVEIGLDQSLSMPND 870
Query: 400 SYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASL 458
SY+ YF ++ ++L GPP+YFV++ YNYSS Q N +C CD++SL+ +I A+
Sbjct: 871 SYVIDYFKSLGQYLHSGPPVYFVLEEGYNYSSRRGQ-NMVCGGMGCDNDSLVQQIFNAAE 929
Query: 459 IPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGV 518
+ + + +SW+DD+ W+SP++ CCR + N ++ +
Sbjct: 930 LDTYTRVGFAPSSWIDDYFDWVSPQS-SCCRLY-NVTHQFCNASV--------------I 973
Query: 519 CKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI 578
C C + K RP +F + LP FL+ P+ C KGGH AY+++V++ G ++
Sbjct: 974 DPTCVRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYSSAVNIMG-DDTY 1032
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYL 633
+ A+ F TYHT L DY+++++ AR +S ++++++ + +FPYSVFY+++EQYL
Sbjct: 1033 IGATYFMTYHTILKTSADYIDALKKARLIASNITETMRSKGSDYRVFPYSVFYVFYEQYL 1092
Query: 634 DIWRTALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAV 692
I A+ NL++++G++F+V L+ C WS+ I+ L + MI+V++ GVM + I LNAV
Sbjct: 1093 TIIDDAIFNLSVSLGSIFLVTLVALGCELWSAVIMCLTIAMILVNMFGVMWLWGISLNAV 1152
Query: 693 SVVNLVMAVGIAVEFCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIV 751
S+VNLVM GI+VEFC HIT AF++S+ G + R +EAL MG+SVFSGITLTK G++V
Sbjct: 1153 SLVNLVMTCGISVEFCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFSGITLTKFGGIVV 1212
Query: 752 LCFSRTEVFVVYYFQMY 768
L F+++++F ++YF+MY
Sbjct: 1213 LAFAKSQIFEIFYFRMY 1229
>MGI|MGI:1097712 [details] [associations]
symbol:Npc1 "Niemann Pick type C1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005764 "lysosome" evidence=IDA] [GO:0005768
"endosome" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006486 "protein
glycosylation" evidence=ISO;IDA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0006914 "autophagy" evidence=ISO] [GO:0007628 "adult walking
behavior" evidence=IGI] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016242 "negative regulation of macroautophagy"
evidence=IGI;IMP] [GO:0030301 "cholesterol transport" evidence=ISO]
[GO:0031982 "vesicle" evidence=IDA] [GO:0033344 "cholesterol
efflux" evidence=ISO;IMP] [GO:0042493 "response to drug"
evidence=IDA] [GO:0042632 "cholesterol homeostasis" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0071383 "cellular response to steroid
hormone stimulus" evidence=IDA] [GO:0071404 "cellular response to
low-density lipoprotein particle stimulus" evidence=IDA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 EMBL:AF003348 MGI:MGI:1097712
GO:GO:0005783 GO:GO:0005886 GO:GO:0005794 GO:GO:0005635
GO:GO:0048471 GO:GO:0005576 GO:GO:0005887 GO:GO:0031902
GO:GO:0005765 GO:GO:0042493 GO:GO:0008206 GO:GO:0005768
GO:GO:0006914 GO:GO:0006486 GO:GO:0008203 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0015485 GO:GO:0033344
GO:GO:0042632 GO:GO:0031982 GO:GO:0007041 GO:GO:0007628
GO:GO:0008158 GO:GO:0071383 GO:GO:0016242 GO:GO:0071404
eggNOG:NOG149152 GeneTree:ENSGT00680000099777 KO:K12385 OMA:DGYDLVQ
CTD:4864 HOVERGEN:HBG003913 OrthoDB:EOG46DM1Z TIGRFAMs:TIGR00917
EMBL:AF003349 EMBL:AC102096 EMBL:AC102248 EMBL:CH466622
IPI:IPI00132600 PIR:T30188 RefSeq:NP_032746.2 UniGene:Mm.3484
ProteinModelPortal:O35604 SMR:O35604 STRING:O35604
PhosphoSite:O35604 PaxDb:O35604 PRIDE:O35604
Ensembl:ENSMUST00000025279 GeneID:18145 KEGG:mmu:18145
HOGENOM:HOG000036674 InParanoid:O35604 ChiTaRS:NPC1 CleanEx:MM_NPC1
Genevestigator:O35604 GermOnline:ENSMUSG00000024413 Uniprot:O35604
Length = 1277
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 280/801 (34%), Positives = 441/801 (55%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFK-----MDPKNFDDF----GGVEHVKYCFQHYT 49
++L DIC+ PL ++C SVL YF+ +D + DDF H YC +
Sbjct: 462 VTLQDICVAPLSPYNKNCTIMSVLNYFQNSHAVLDSQVGDDFYIYADYHTHFLYCVRAPA 521
Query: 50 STESCMSAFKGPLDPSTALGGFSG--------NNYSEASAFVVT-YPVNNAVDREGNETK 100
S S GP LG F G Y + + T + V+ N+T+
Sbjct: 522 SLNDT-SLLHGP-----CLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTE 575
Query: 101 KAVAWEKAFVQLAKDELLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLV 157
+ ++A+ + E + V++ NLT++F++E SIE+EL RES +D T++ISY+V
Sbjct: 576 RL---QRAWAW--EKEFISFVKNYKNPNLTISFTAERSIEDELNRESNSDVFTVIISYVV 630
Query: 158 MFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVI 217
MF YISL LG S + FS +G+ TLI++EVI
Sbjct: 631 MFLYISLALGHIQSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYMGMPLTLIVIEVI 690
Query: 218 PFLVLAVGVDNMCILVHAVKRQQL--ELPLETRISNALVEVGPSITLASLSEVLAFAVGS 275
PFLVLAVGVDN+ ILV +R + E L+ ++ L EV P++ L+S SE AF G+
Sbjct: 691 PFLVLAVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGA 750
Query: 276 FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADS 335
MPA FS+ QIT FV+L+ D R E +D + C++ AD
Sbjct: 751 LSSMPAVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNHLDILCCVR----GADD 806
Query: 336 DKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIV 395
+G L R+ K A +L ++ V+++FV S+A+ +++ GL+Q +
Sbjct: 807 GQG-SHASESYLFRFFKNYFAPLLLKDWLRPIVVAVFVGVLSFSVAVVNKVDIGLDQSLS 865
Query: 396 LPRDSYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEIS 454
+P DSY+ YF +++++L GPP+YFV++ YNYSS Q N +C CD++SL+ +I
Sbjct: 866 MPNDSYVIDYFKSLAQYLHSGPPVYFVLEEGYNYSSRKGQ-NMVCGGMGCDNDSLVQQIF 924
Query: 455 RASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXX 514
A+ + + + +SW+DD+ W+SP++ CCR + N ++
Sbjct: 925 NAAELDTYTRVGFAPSSWIDDYFDWVSPQS-SCCRLY-NVTHQFCNASVMDPT------- 975
Query: 515 XAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGY 574
C C + K RP +F + LP FL+ P+ C KGGH AY ++V++ G
Sbjct: 976 -------CVRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYGSAVNIVG- 1027
Query: 575 ENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYF 629
++ + A+ F TYHT L DY ++M+ AR +S ++++++ + +FPYSVFY+++
Sbjct: 1028 DDTYIGATYFMTYHTILKTSADYTDAMKKARLIASNITETMRSKGSDYRVFPYSVFYVFY 1087
Query: 630 EQYLDIWRTALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQ 688
EQYL I + NL++++G++F+V L+ C WS+ I+ + + MI+V++ GVM + I
Sbjct: 1088 EQYLTIIDDTIFNLSVSLGSIFLVTLVVLGCELWSAVIMCITIAMILVNMFGVMWLWGIS 1147
Query: 689 LNAVSVVNLVMAVGIAVEFCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLV 747
LNAVS+VNLVM+ GI+VEFC HIT AF++S+ G + R +EAL MG+SVFSGITLTK
Sbjct: 1148 LNAVSLVNLVMSCGISVEFCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFSGITLTKFG 1207
Query: 748 GVIVLCFSRTEVFVVYYFQMY 768
G++VL F+++++F ++YF+MY
Sbjct: 1208 GIVVLAFAKSQIFEIFYFRMY 1228
>UNIPROTKB|F1SBB5 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9823 "Sus
scrofa" [GO:0071404 "cellular response to low-density lipoprotein
particle stimulus" evidence=IEA] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0033344 "cholesterol efflux" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0016242 "negative regulation of
macroautophagy" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0005768 GO:GO:0006914 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0033344 GO:GO:0031982
GO:GO:0007628 GO:GO:0008158 GO:GO:0071383 GO:GO:0016242
GO:GO:0071404 GeneTree:ENSGT00680000099777 OMA:DGYDLVQ
TIGRFAMs:TIGR00917 EMBL:CU657945 Ensembl:ENSSSCT00000004106
Uniprot:F1SBB5
Length = 1277
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 285/796 (35%), Positives = 436/796 (54%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAF 58
++L DIC+ PL ++C SVL YF+ D G Y H T C+ A
Sbjct: 462 VTLQDICLAPLSPYNKNCTILSVLNYFQNSHSVLDHQVGDFFFVYADYH-THFLYCVRAP 520
Query: 59 KGPLDPST----ALGGFSG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAW 105
D S LG F G Y + + T + V+ N+T+K
Sbjct: 521 ASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKL--- 577
Query: 106 EKAFVQLAKDELLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
++A Q + E + V++ NLT++F +E SIE+EL RES +D TI+ISY +MF YI
Sbjct: 578 QRA--QAWESEFINFVKNYKNPNLTISFMAERSIEDELNRESNSDLFTILISYAIMFLYI 635
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
S+ LG S + FS IGV TLI++EVIPFLVL
Sbjct: 636 SIALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVL 695
Query: 223 AVGVDNMCILVHAVKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ ILV +R ++L+ L+ ++ L EV PS+ L+S SE +AF +G +P
Sbjct: 696 AVGVDNIFILVQTYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGGLSVVP 755
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A FS+ QIT FV+L+ D R E R+D + C++ A+ G+
Sbjct: 756 AVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNRLDVVCCVQ----GAEDGAGV- 810
Query: 341 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
Q L R+ K +A +L ++ VI++FV SIA+ ++E GL+Q + +P DS
Sbjct: 811 QASESCLFRFFKNSYAPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDS 870
Query: 401 YLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLI 459
Y+ YF ++S +L GPP+YFVV+ +NY+S Q N +C C+++SL+ +I A+ +
Sbjct: 871 YVMDYFQSLSRYLHAGPPVYFVVEEGHNYTSLKGQ-NMVCGGLGCNNDSLVQQIFTAAQL 929
Query: 460 PQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVC 519
+ I +SW+DD+ WI P++ CCR + + V
Sbjct: 930 DNYTRIGFAPSSWIDDYFDWIKPQS-SCCRVYNSTDQFCNASV---------------VD 973
Query: 520 KDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIV 579
C C + K RP F LP FL+ P+ C KGGH AY+++V++ G +G V
Sbjct: 974 PTCIRCRPLTSEGKQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGSG-V 1032
Query: 580 QASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLD 634
A+ F TYHT L D++++M+ AR +S ++ ++ +E +FPYSVFY+++EQYL
Sbjct: 1033 GATYFMTYHTVLQASADFIDAMQKARLIASNITRTMGLEASSYRVFPYSVFYVFYEQYLT 1092
Query: 635 IWRTALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVS 693
+ + NL +++GA+F+V ++ C W++ I+ + + MI+V++ GVM + I LNAVS
Sbjct: 1093 VIDDTIFNLGVSLGAIFLVTVVLMGCELWATVIMCVTIAMILVNMFGVMWLWGISLNAVS 1152
Query: 694 VVNLVMAVGIAVEFCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIVL 752
+VNLVM+ GI+VEFC HIT AF++S+ G + R +EAL MG+SVFSGITLTK G++VL
Sbjct: 1153 LVNLVMSCGISVEFCSHITRAFTLSTKGSRVDRAEEALAHMGSSVFSGITLTKFGGIVVL 1212
Query: 753 CFSRTEVFVVYYFQMY 768
F+++++F ++YF+MY
Sbjct: 1213 AFAKSQIFQIFYFRMY 1228
>UNIPROTKB|P56941 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9823 "Sus
scrofa" [GO:0030301 "cholesterol transport" evidence=ISS]
[GO:0005764 "lysosome" evidence=ISS] [GO:0005576 "extracellular
region" evidence=ISS] [GO:0006486 "protein glycosylation"
evidence=ISS] [GO:0015485 "cholesterol binding" evidence=ISS]
[GO:0007041 "lysosomal transport" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005635 "nuclear
envelope" evidence=ISS] [GO:0042632 "cholesterol homeostasis"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0005783 GO:GO:0005635 GO:GO:0048471 GO:GO:0005576
GO:GO:0005887 GO:GO:0031902 GO:GO:0005765 GO:GO:0008206
GO:GO:0006486 GO:GO:0008203 GO:GO:0005764 GO:GO:0015485
GO:GO:0042632 GO:GO:0007041 GO:GO:0030301 GO:GO:0008158
eggNOG:NOG149152 KO:K12385 CTD:4864 HOVERGEN:HBG003913
OrthoDB:EOG46DM1Z TIGRFAMs:TIGR00917 HOGENOM:HOG000036674
EMBL:AF169635 RefSeq:NP_999487.1 UniGene:Ssc.1533
ProteinModelPortal:P56941 STRING:P56941 GeneID:397591
KEGG:ssc:397591 Uniprot:P56941
Length = 1277
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 285/796 (35%), Positives = 436/796 (54%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAF 58
++L DIC+ PL ++C SVL YF+ D G Y H T C+ A
Sbjct: 462 VTLQDICLAPLSPYNKNCTILSVLNYFQNSHSVLDHQVGDFFFVYADYH-THFLYCVRAP 520
Query: 59 KGPLDPST----ALGGFSG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAW 105
D S LG F G Y + + T + V+ N+T+K
Sbjct: 521 ASLNDASLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKL--- 577
Query: 106 EKAFVQLAKDELLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
++A Q + E + V++ NLT++F +E SIE+EL RES +D TI+ISY +MF YI
Sbjct: 578 QRA--QAWESEFINFVKNYKNPNLTISFMAERSIEDELNRESNSDLFTILISYAIMFLYI 635
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
S+ LG S + FS IGV TLI++EVIPFLVL
Sbjct: 636 SIALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVL 695
Query: 223 AVGVDNMCILVHAVKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ ILV +R ++L+ L+ ++ L EV PS+ L+S SE +AF +G +P
Sbjct: 696 AVGVDNIFILVQTYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGGLSVVP 755
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A FS+ QIT FV+L+ D R E R+D + C++ A+ G+
Sbjct: 756 AVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNRLDVVCCVQ----GAEDGAGV- 810
Query: 341 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
Q L R+ K +A +L ++ VI++FV SIA+ ++E GL+Q + +P DS
Sbjct: 811 QASESCLFRFFKNSYAPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDS 870
Query: 401 YLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLI 459
Y+ YF ++S +L GPP+YFVV+ +NY+S Q N +C C+++SL+ +I A+ +
Sbjct: 871 YVMDYFQSLSRYLHAGPPVYFVVEEGHNYTSLKGQ-NMVCGGLGCNNDSLVQQIFTAAQL 929
Query: 460 PQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVC 519
+ I +SW+DD+ WI P++ CCR + + V
Sbjct: 930 DNYTRIGFAPSSWIDDYFDWIKPQS-SCCRVYNSTDQFCNASV---------------VD 973
Query: 520 KDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIV 579
C C + K RP F LP FL+ P+ C KGGH AY+++V++ G +G V
Sbjct: 974 PTCIRCRPLTSEGKQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGSG-V 1032
Query: 580 QASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLD 634
A+ F TYHT L D++++M+ AR +S ++ ++ +E +FPYSVFY+++EQYL
Sbjct: 1033 GATYFMTYHTVLQASADFIDAMQKARLIASNITRTMGLEASSYRVFPYSVFYVFYEQYLT 1092
Query: 635 IWRTALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVS 693
+ + NL +++GA+F+V ++ C W++ I+ + + MI+V++ GVM + I LNAVS
Sbjct: 1093 VIDDTIFNLGVSLGAIFLVTVVLMGCELWATVIMCVTIAMILVNMFGVMWLWGISLNAVS 1152
Query: 694 VVNLVMAVGIAVEFCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIVL 752
+VNLVM+ GI+VEFC HIT AF++S+ G + R +EAL MG+SVFSGITLTK G++VL
Sbjct: 1153 LVNLVMSCGISVEFCSHITRAFTLSTKGSRVDRAEEALAHMGSSVFSGITLTKFGGIVVL 1212
Query: 753 CFSRTEVFVVYYFQMY 768
F+++++F ++YF+MY
Sbjct: 1213 AFAKSQIFQIFYFRMY 1228
>UNIPROTKB|Q9JLG3 [details] [associations]
symbol:NPC1 "Niemann-Pick type C1 protein" species:10029
"Cricetulus griseus" [GO:0005635 "nuclear envelope" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0007041 "lysosomal
transport" evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005635
GO:GO:0048471 GO:GO:0005887 GO:GO:0008206 GO:GO:0042632
GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 CTD:4864
HOVERGEN:HBG003913 TIGRFAMs:TIGR00917 EMBL:AF182744
RefSeq:NP_001233616.1 ProteinModelPortal:Q9JLG3 GeneID:100689424
Uniprot:Q9JLG3
Length = 1277
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 282/797 (35%), Positives = 437/797 (54%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAF 58
++L DIC+ PL ++C SVL YF+ D G + Y H T C+ A
Sbjct: 462 VTLQDICVAPLSPYNKNCTIISVLNYFQNSHSVLDHQVGDDFYVYADYH-THFLYCVRAP 520
Query: 59 KGPLDPST----ALGGFSG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAW 105
D S LG F G Y + + T + V N+T+K
Sbjct: 521 TSLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVSNYYNDTEKL--- 577
Query: 106 EKAFVQLAKDELLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
++A Q + E + V+S NLT++F +E SIE+EL RES +D TI ISY +MF YI
Sbjct: 578 QRA--QAWEKEFIDFVKSYKNPNLTISFIAERSIEDELNRESNSDVFTIAISYAIMFLYI 635
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
SL LG S + FS +G+ TLI++EVIPFLVL
Sbjct: 636 SLALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGVFSYMGMPLTLIVIEVIPFLVL 695
Query: 223 AVGVDNMCILVHAVKRQQL--ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ ILV +R + E L+ ++ L EV P++ L+S SE AF G+ MP
Sbjct: 696 AVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMP 755
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A FS+ QIT FV+L+ D R E R+D + C+ D+ +GI
Sbjct: 756 AVHTFSLFAGLAVLIDFLLQITCFVSLLGLDIKRQEKNRLDILCCV----GGTDNGRGI- 810
Query: 341 QRKPGLLARYMKEVHAT-ILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRD 399
Q L R+ K A +L W ++ VI++FV SIA+ ++E GL+Q + +P D
Sbjct: 811 QASESYLFRFFKNSFAPFLLKDW-LRPIVIAVFVGVLSFSIAVMNKVEIGLDQSLSMPND 869
Query: 400 SYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASL 458
SY+ YF ++ ++L GPP+YFV++ ++Y++ Q N +C CD++SL+ +I A+
Sbjct: 870 SYVIDYFKSLGQYLHSGPPVYFVLEEGHDYTTHKGQ-NMVCGGMGCDNDSLVQQIFNAAE 928
Query: 459 IPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGV 518
+ + I +SW+DD+ W++P++ CCR + N ++ +
Sbjct: 929 LDNYTRIGFAPSSWIDDYFDWVAPQS-SCCRLY-NATHQFCNASV--------------I 972
Query: 519 CKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI 578
C C + K RP +F + LP FL+ P+ C KGGH AY+++V++ G ++
Sbjct: 973 DPTCIRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYSSAVNIIG-DDTY 1031
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYL 633
V A+ F TYHT L DY+++M+ A+ + +++++ + +FPYSVFY+++EQYL
Sbjct: 1032 VGATYFMTYHTVLKTSADYIDAMKKAQLVARNITETMNSKGSNYRVFPYSVFYVFYEQYL 1091
Query: 634 DIWRTALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAV 692
I + NL++++G++F+V L+ C WS+ I+ + + MI+V++ GVM + I LNAV
Sbjct: 1092 TIIDDTIFNLSVSLGSIFLVTLVVLGCELWSAVIMCITIAMILVNMFGVMWLWDISLNAV 1151
Query: 693 SVVNLVMAVGIAVEFCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIV 751
S+VNLVM+ GI+VEFC HIT AF++S+ G + R +EAL MG+SVFSGITLTK G++V
Sbjct: 1152 SLVNLVMSCGISVEFCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFSGITLTKFGGIVV 1211
Query: 752 LCFSRTEVFVVYYFQMY 768
L F+++++F ++YF+MY
Sbjct: 1212 LAFAKSQIFEIFYFRMY 1228
>RGD|1303135 [details] [associations]
symbol:Npc1l1 "NPC1-like 1" species:10116 "Rattus norvegicus"
[GO:0006695 "cholesterol biosynthetic process" evidence=ISO]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=ISO]
[GO:0030299 "intestinal cholesterol absorption" evidence=ISO]
[GO:0030301 "cholesterol transport" evidence=IEA;ISO] [GO:0031489
"myosin V binding" evidence=ISO] [GO:0031526 "brush border
membrane" evidence=IDA] [GO:0042157 "lipoprotein metabolic process"
evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042632 "cholesterol homeostasis" evidence=IEA;ISO]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 RGD:1303135 GO:GO:0016021
GO:GO:0042493 GO:GO:0016324 GO:GO:0008144 GO:GO:0008203
GO:GO:0031526 GO:GO:0030301 GO:GO:0008158 HOVERGEN:HBG003913
TIGRFAMs:TIGR00917 CTD:29881 KO:K14461 EMBL:AY437867
IPI:IPI00454430 RefSeq:NP_001002025.1 UniGene:Rn.123563
ProteinModelPortal:Q6T3U3 PRIDE:Q6T3U3 GeneID:432367
KEGG:rno:432367 BindingDB:Q6T3U3 ChEMBL:CHEMBL5161 NextBio:696855
Genevestigator:Q6T3U3 Uniprot:Q6T3U3
Length = 1331
Score = 1107 (394.7 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 281/825 (34%), Positives = 427/825 (51%)
Query: 15 DCATQSVLQYFK------MDPKNFDDFGGV------EHVKYC------FQHYTSTE-SCM 55
DC S+LQYF+ M N G +H YC F+ TS SCM
Sbjct: 484 DCCVNSLLQYFQNNRTLLMLTANQTLNGQTSLVDWKDHFLYCANAPLTFKDGTSLALSCM 543
Query: 56 SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 115
+ + P+ P A+GG+ G +YSEA A ++T+ +NN + +A WE+AF L +
Sbjct: 544 ADYGAPVFPFLAVGGYQGTDYSEAEALIITFSLNN-YPADDPRMAQAKLWEEAF--LKEM 600
Query: 116 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 175
E S +AFS+E S+E+E+ R + D +SY+++F YISL LG S
Sbjct: 601 ESFQRNTSDKFQVAFSAERSLEDEINRTTIQDLPVFAVSYIIVFLYISLALGSYSRCSRV 660
Query: 176 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 235
+ F+S +GV S+L+I++V+PFLVLAVG DN+ I V
Sbjct: 661 AVESKATLGLGGVIVVLGAVLAAMGFYSYLGVPSSLVIIQVVPFLVLAVGADNIFIFV-- 718
Query: 236 VKRQQL-ELPLETR---ISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXX 291
++ Q+L +P E R I L V PS+ L SLSE + F +G+ PMPA R F++
Sbjct: 719 LEYQRLPRMPGEQREAHIGRTLGSVAPSMLLCSLSEAICFFLGALTPMPAVRTFALTSGL 778
Query: 292 XXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYM 351
Q+TAFVAL+ D R E R D + C S+ K K GLL R+
Sbjct: 779 AIILDFLLQMTAFVALLSLDSKRQEASRPDVLCCF--STRKLPPPK----EKEGLLLRFF 832
Query: 352 KEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISE 411
++++A L ++ V+ LF+ A++ L I GL+Q++ LP+DSYL YF ++
Sbjct: 833 RKIYAPFLLHRFIRPVVMLLFLTLFGANLYLMCNINVGLDQELALPKDSYLIDYFLFLNR 892
Query: 412 HLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAA 470
+L +GPP+YFV + +N+SSE+ N CS + C S SL +I AS P SY+A A+
Sbjct: 893 YLEVGPPVYFVTTSGFNFSSEAGM-NATCSSAGCKSFSLTQKIQYASEFPDQSYVAIAAS 951
Query: 471 SWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSD 530
SW+DDF+ W++P + CCR + G + K+C +
Sbjct: 952 SWVDDFIDWLTPSS-SCCRLYIRGPHKDEFCPSTDTSF--------NCLKNCM----NRT 998
Query: 531 LLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTP 590
L RP+ QF + LPWFLN P+ C KGG AY SV+L +G V AS F YH P
Sbjct: 999 LGPVRPTAEQFHKYLPWFLNDPPNIRCPKGGLAAYRTSVNLSS--DGQVIASQFMAYHKP 1056
Query: 591 LNRQIDYVNSMRAAREFSSRVSDSLQ--------MEIFPYSVFYMYFEQYLDIWRTALIN 642
L D+ ++RA+R ++ ++ L+ E+FPY++ ++++QYL + +
Sbjct: 1057 LRNSQDFTEALRASRLLAANITADLRKVPGTDPNFEVFPYTISNVFYQQYLTVLPEGIFT 1116
Query: 643 LAIAIGAVFVVC-LITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAV 701
LA+ FVVC L+ S + LL + MI+VD +G+MA+ I NAVS++NLV AV
Sbjct: 1117 LALCFVPTFVVCYLLLGLDMCSGILNLLSIIMILVDTIGLMAVWGISYNAVSLINLVTAV 1176
Query: 702 GIAVEFCVHITHAFSVSSGDKN-QRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVF 760
G++VEF HIT +F+VS+ +R K+A MG++VF+G+ +T G+++L F++ ++
Sbjct: 1177 GMSVEFVSHITRSFAVSTKPTRLERAKDATVFMGSAVFAGVAMTNFPGILILGFAQAQLI 1236
Query: 761 VVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGPPSRCMLVERQEER 805
+++F++ S GP LV QEE+
Sbjct: 1237 QIFFFRLNLLITLLGLLHGLVFLPVVLSYLGPDVNQALV--QEEK 1279
Score = 63 (27.2 bits), Expect = 1.1e-116, Sum P(2) = 1.1e-116
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 2 ISLTDICMKPLG------QDCATQSVLQYFK 26
ISL DIC PL DC S+LQYF+
Sbjct: 465 ISLQDICYAPLNPYNTSLSDCCVNSLLQYFQ 495
>UNIPROTKB|Q9TT75 [details] [associations]
symbol:NPC1 "Niemann-Pick type C1 disease protein"
species:9986 "Oryctolagus cuniculus" [GO:0005635 "nuclear envelope"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0007041
"lysosomal transport" evidence=ISS] [GO:0008206 "bile acid
metabolic process" evidence=ISS] [GO:0042632 "cholesterol
homeostasis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0008206 GO:GO:0005768 GO:GO:0006914
GO:GO:0006897 GO:GO:0005764 GO:GO:0045121 GO:GO:0033344
GO:GO:0042632 GO:GO:0031982 GO:GO:0007041 GO:GO:0007628
GO:GO:0008158 GO:GO:0071383 GO:GO:0016242 GO:GO:0071404
eggNOG:NOG149152 CTD:4864 HOVERGEN:HBG003913 OrthoDB:EOG46DM1Z
TIGRFAMs:TIGR00917 HOGENOM:HOG000036674 EMBL:AF202730
RefSeq:NP_001075540.1 UniGene:Ocu.2405 ProteinModelPortal:Q9TT75
STRING:Q9TT75 GeneID:100008746 Uniprot:Q9TT75
Length = 1286
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 288/797 (36%), Positives = 433/797 (54%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAF 58
++L DIC+ PL ++C SVL YF+ D G + Y H T C+
Sbjct: 471 VTLQDICLAPLSPYNKNCTILSVLNYFQNSHSMLDHEQGDDFFVYADYH-THFLYCVRVP 529
Query: 59 KGPLDPST----ALGGFSG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAW 105
D S LG F G Y + + T + V N+T+K +
Sbjct: 530 ASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVSNYYNDTEK-LQR 588
Query: 106 EKAFVQLAKDELLPMV---QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
KA+ + E + V ++ NLT++F++E SIE+EL RES +D T+VISY VMF YI
Sbjct: 589 AKAW----EKEFINFVKNYENPNLTISFTAERSIEDELDRESNSDVFTVVISYAVMFLYI 644
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
SL LG F + FS IG+ TLI++EVIPFLVL
Sbjct: 645 SLALGHIKSCRRFLVDSKVSLGIAGILIVLSSVACSLGIFSYIGIPLTLIVIEVIPFLVL 704
Query: 223 AVGVDNMCILVHAVKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ ILV +R ++L+ L+ ++ L EV PSI L+S +E +AF +G MP
Sbjct: 705 AVGVDNIFILVQTYQRDERLQGETLDQQLGRVLGEVAPSIFLSSFAETVAFFLGGLSVMP 764
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A FS+ QIT FV+L+ D R E ++D + C + A++ I
Sbjct: 765 AVHTFSLFAGMAVFIDFLLQITCFVSLLGLDIKRQEKNQLDVLCCFR----GAEAGTSI- 819
Query: 341 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
Q L R+ K ++ +L ++ VI++FV SIA+ ++E GL+Q + +P DS
Sbjct: 820 QASESYLFRFFKNSYSPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDS 879
Query: 401 YLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLI 459
Y+ YF ++ ++L GPP+YFV++ +NY+S Q N +C CD++SL+ +I A+ +
Sbjct: 880 YVVDYFKSLGQYLHAGPPVYFVLEEGHNYTSLQGQ-NMVCGGLGCDNDSLVQQIFNAAQL 938
Query: 460 PQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVC 519
+ I +SW+DD+ W+ P++ CCR +N + V
Sbjct: 939 DNYTRIGFAPSSWIDDYFDWVKPQS-SCCR-VSN--------------VTEQFCNASVVD 982
Query: 520 KDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI- 578
C C + K RP F LP FL+ P+ C KGGH AY +V++ G NG
Sbjct: 983 PACVRCRPLTPEGKQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYGTAVNILG--NGTE 1040
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYL 633
V A+ F TYHT L D++++M+ A+ + + ++ ++ +FPYSVFY+++EQYL
Sbjct: 1041 VGATYFMTYHTVLQTSADFIDAMKKAQLIAGNATATMGLKGSRCRVFPYSVFYVFYEQYL 1100
Query: 634 DIWRTALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAV 692
I A+ NL +++GAVFVV ++ C WS+ I+ + +TMI+V++ GVM + I LNAV
Sbjct: 1101 TILDDAVFNLGVSLGAVFVVAVVLLGCELWSAVIMCVTITMILVNMFGVMWLWGISLNAV 1160
Query: 693 SVVNLVMAVGIAVEFCVHITHAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIV 751
S+VNLVM+ GI+VEFC HIT AF+VS G + R +EAL MG+SVFSGITLTK G++V
Sbjct: 1161 SLVNLVMSCGISVEFCSHITRAFTVSGKGSRVARAEEALAHMGSSVFSGITLTKFGGIVV 1220
Query: 752 LCFSRTEVFVVYYFQMY 768
L F+++++F ++YF+MY
Sbjct: 1221 LAFAKSQIFQIFYFRMY 1237
>UNIPROTKB|B4DET3 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0030301 GO:GO:0008158 UniGene:Hs.464779
UniGene:Hs.715623 HGNC:HGNC:7897 HOVERGEN:HBG003913
TIGRFAMs:TIGR00917 HOGENOM:HOG000036674 EMBL:AC026634 EMBL:AC010853
EMBL:AK293779 IPI:IPI00646796 STRING:B4DET3 Ensembl:ENST00000412552
UCSC:uc010xaz.2 Uniprot:B4DET3
Length = 960
Score = 1101 (392.6 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
Identities = 245/657 (37%), Positives = 380/657 (57%)
Query: 122 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 181
++ NLT++F++E SIE+EL RES +D T+VISY +MF YISL LG +
Sbjct: 277 KNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYISLALGHMKSCRRLLVDSKV 336
Query: 182 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR-QQ 240
FS IG+ TLI++EVIPFLVLAVGVDN+ ILV A +R ++
Sbjct: 337 SLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDER 396
Query: 241 LE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXX 299
L+ L+ ++ L EV PS+ L+S SE +AF +G+ MPA FS+
Sbjct: 397 LQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAVFIDFLL 456
Query: 300 QITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATIL 359
QIT FV+L+ D R E R+D C++ A+ + Q L R+ K ++ +L
Sbjct: 457 QITCFVSLLGLDIKRQEKNRLDIFCCVR----GAEDGTSV-QASESCLFRFFKNSYSPLL 511
Query: 360 SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 419
++ VI++FV SIA+ +++ GL+Q + +P DSY+ YF +IS++L GPP+
Sbjct: 512 LKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLHAGPPV 571
Query: 420 YFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLV 478
YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+DD+
Sbjct: 572 YFVLEEGHDYTSSKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFD 630
Query: 479 WISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPST 538
W+ P++ CCR + V C C + K RP
Sbjct: 631 WVKPQS-SCCR---------------VDNITDQFCNASVVDPACVRCRPLTPEGKQRPQG 674
Query: 539 IQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYV 598
F LP FL+ P+ C KGGH AY+++V++ V A+ F TYHT L D++
Sbjct: 675 GDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVGATYFMTYHTVLQTSADFI 734
Query: 599 NSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVV 653
++++ AR +S V++++ + +FPYSVFY+++EQYL I + NL +++GA+F+V
Sbjct: 735 DALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLV 794
Query: 654 CLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHIT 712
++ C WS+ I+ + M++V++ GVM + I LNAVS+VNLVM+ GI+VEFC HIT
Sbjct: 795 TMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHIT 854
Query: 713 HAFSVS-SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMY 768
AF+VS G + +R +EAL MG+SVFSGITLTK G++VL F+++++F ++YF+MY
Sbjct: 855 RAFTVSMKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMY 911
Score = 66 (28.3 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 2 ISLTDICMKPLGQ---DCATQSVLQYFK-----MDPKNFDDF 35
++L DIC+ PL +C SVL YF+ +D K DDF
Sbjct: 212 VTLQDICLAPLSPYNTNCTILSVLNYFQNSHSVLDHKKGDDF 253
>UNIPROTKB|K7EQ23 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
HGNC:HGNC:7897 TIGRFAMs:TIGR00917 EMBL:AC026634 EMBL:AC010853
Ensembl:ENST00000591051 Uniprot:K7EQ23
Length = 971
Score = 1101 (392.6 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
Identities = 245/657 (37%), Positives = 380/657 (57%)
Query: 122 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 181
++ NLT++F++E SIE+EL RES +D T+VISY +MF YISL LG +
Sbjct: 288 KNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYISLALGHMKSCRRLLVDSKV 347
Query: 182 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR-QQ 240
FS IG+ TLI++EVIPFLVLAVGVDN+ ILV A +R ++
Sbjct: 348 SLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDER 407
Query: 241 LE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXX 299
L+ L+ ++ L EV PS+ L+S SE +AF +G+ MPA FS+
Sbjct: 408 LQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAVFIDFLL 467
Query: 300 QITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATIL 359
QIT FV+L+ D R E R+D C++ A+ + Q L R+ K ++ +L
Sbjct: 468 QITCFVSLLGLDIKRQEKNRLDIFCCVR----GAEDGTSV-QASESCLFRFFKNSYSPLL 522
Query: 360 SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 419
++ VI++FV SIA+ +++ GL+Q + +P DSY+ YF +IS++L GPP+
Sbjct: 523 LKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLHAGPPV 582
Query: 420 YFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLV 478
YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+DD+
Sbjct: 583 YFVLEEGHDYTSSKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFD 641
Query: 479 WISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPST 538
W+ P++ CCR + V C C + K RP
Sbjct: 642 WVKPQS-SCCR---------------VDNITDQFCNASVVDPACVRCRPLTPEGKQRPQG 685
Query: 539 IQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYV 598
F LP FL+ P+ C KGGH AY+++V++ V A+ F TYHT L D++
Sbjct: 686 GDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVGATYFMTYHTVLQTSADFI 745
Query: 599 NSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVV 653
++++ AR +S V++++ + +FPYSVFY+++EQYL I + NL +++GA+F+V
Sbjct: 746 DALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLV 805
Query: 654 CLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHIT 712
++ C WS+ I+ + M++V++ GVM + I LNAVS+VNLVM+ GI+VEFC HIT
Sbjct: 806 TMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHIT 865
Query: 713 HAFSVS-SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMY 768
AF+VS G + +R +EAL MG+SVFSGITLTK G++VL F+++++F ++YF+MY
Sbjct: 866 RAFTVSMKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMY 922
Score = 66 (28.3 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 2 ISLTDICMKPLGQ---DCATQSVLQYFK-----MDPKNFDDF 35
++L DIC+ PL +C SVL YF+ +D K DDF
Sbjct: 223 VTLQDICLAPLSPYNTNCTILSVLNYFQNSHSVLDHKKGDDF 264
>FB|FBgn0024320 [details] [associations]
symbol:Npc1a "Niemann-Pick type C-1a" species:7227
"Drosophila melanogaster" [GO:0005765 "lysosomal membrane"
evidence=ISS] [GO:0030301 "cholesterol transport" evidence=ISS]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007591 "molting cycle,
chitin-based cuticle" evidence=IMP] [GO:0016125 "sterol metabolic
process" evidence=IMP] [GO:0045456 "ecdysteroid biosynthetic
process" evidence=IMP] [GO:0032374 "regulation of cholesterol
transport" evidence=IDA] [GO:0007291 "sperm individualization"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0007291 GO:GO:0007591 GO:GO:0032374 GO:GO:0016125
GO:GO:0030301 GO:GO:0008158 GO:GO:0045456 eggNOG:NOG149152
TIGRFAMs:TIGR00917 ChiTaRS:NPC1 EMBL:BT009977
ProteinModelPortal:Q7YU59 SMR:Q7YU59 STRING:Q7YU59 PaxDb:Q7YU59
PRIDE:Q7YU59 FlyBase:FBgn0024320 InParanoid:Q7YU59
OrthoDB:EOG4JSXMB ArrayExpress:Q7YU59 Bgee:Q7YU59 Uniprot:Q7YU59
Length = 1287
Score = 741 (265.9 bits), Expect = 4.2e-116, Sum P(2) = 4.2e-116
Identities = 182/510 (35%), Positives = 277/510 (54%)
Query: 4 LTDICMKPLGQD--------CATQSVLQYFKMDPKNFDDFG-----GVEHVKYCFQHYTS 50
L DIC PL D C QS+ YF D + DD V ++ + ++
Sbjct: 461 LKDICYAPLSDDGSEIDVSQCVVQSIWGYFGDDRERLDDHDEDNGFNVTYLDALYDCISN 520
Query: 51 TESCMSAFKGPLDPSTALGGF-------SGNNYSE-ASAFVVTYPVNNAVDREGNETKKA 102
C++ + GP+DP+ ALGGF +G+ E A+A ++T+ V N ++ + + A
Sbjct: 521 PYLCLAPYGGPVDPAIALGGFLPPGDQLTGSTKFELANAIILTFLVKNHHNK--TDLENA 578
Query: 103 VAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
+ WEK FV+ + + S+ + +AF+SE SIE+EL RES +D +TI++SYL+MF YI
Sbjct: 579 LTWEKKFVEFMTNYTKNNM-SQYMDIAFTSERSIEDELNRESQSDVLTILVSYLIMFMYI 637
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
+++LG +I F IG+ +TLII+EVIPFLVL
Sbjct: 638 AISLGHVKEFKRVFIDSKITLGIGGVIIVLASVVSSVGVFGYIGLPATLIIVEVIPFLVL 697
Query: 223 AVGVDNMCILVHAVKRQQLEL--PLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ ILV +R Q + LE ++ L +VGPSI L SLSE F +G MP
Sbjct: 698 AVGVDNIFILVQTHQRDQRKPNETLEQQVGRILGKVGPSILLTSLSESFCFFLGGLSDMP 757
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A R F++ QIT FV+L D R E+ R+D C + DS I
Sbjct: 758 AVRAFALYAGVALIIDFLLQITCFVSLFTLDTKRREENRMDI--CCFIKGKKPDS---IT 812
Query: 341 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
+ GLL ++ V+ L V+ +V+ +F A+ SIA+ RI+ GL+Q++ +P+DS
Sbjct: 813 SNE-GLLYKFFSSVYVPFLMKKIVRASVMVIFFAWLCFSIAIAPRIDIGLDQELAMPQDS 871
Query: 401 YLQGYFNNISEHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLI 459
++ YF ++ E+L IGPP+YFV+K + Y++ S Q N +C+ C+ +S+L +I AS
Sbjct: 872 FVLHYFQSLDENLNIGPPVYFVLKGDLAYTNSSDQ-NLVCAGQYCNDDSVLTQIYLASRH 930
Query: 460 PQSSYIAKPAASWLDDFLVWISPEAFGCCR 489
+YIA+PA+SW+DD+ W + A CC+
Sbjct: 931 SNQTYIARPASSWIDDYFDWAAA-ASSCCK 959
Score = 441 (160.3 bits), Expect = 4.2e-116, Sum P(2) = 4.2e-116
Identities = 95/228 (41%), Positives = 146/228 (64%)
Query: 558 AKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ- 616
A GG Y+NS +E ++AS F YHT L DY ++ +AR+ S+ ++ LQ
Sbjct: 1016 AYGGAVRYSNS-----HERLNIEASYFMAYHTILKSSADYFLALESARKISANITQMLQG 1070
Query: 617 --------------MEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITT-CSF 661
+E+FPYSVFY+++EQYL +W L ++ I++ ++FVV +
Sbjct: 1071 RLMSNGVPMASALTVEVFPYSVFYVFYEQYLTMWSDTLQSMGISVLSIFVVTFVLMGFDV 1130
Query: 662 WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVS-SG 720
S+ ++++ +TMIVV+L G+M I LNAVS+VNLVMAVGI+VEFC H+ H+F+ S S
Sbjct: 1131 HSALVVVITITMIVVNLGGLMYYWNISLNAVSLVNLVMAVGISVEFCSHLVHSFATSKSV 1190
Query: 721 DKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMY 768
+ R ++L MG+S+FSGITLTK G++VL F+++++F V+YF+MY
Sbjct: 1191 SQIDRAADSLSKMGSSIFSGITLTKFAGILVLAFAKSQIFQVFYFRMY 1238
Score = 236 (88.1 bits), Expect = 1.8e-94, Sum P(2) = 1.8e-94
Identities = 57/176 (32%), Positives = 94/176 (53%)
Query: 522 CTTC-FHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKG-YENGIV 579
C C + LL RP +F + LP+FL P +CAK GH AY +V +E +
Sbjct: 975 CLRCNITKNSLL--RPEEKEFVKYLPFFLKDNPDDTCAKAGHAAYGGAVRYSNSHERLNI 1032
Query: 580 QASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ---------------MEIFPYSV 624
+AS F YHT L DY ++ +AR+ S+ ++ LQ +E+FPYSV
Sbjct: 1033 EASYFMAYHTILKSSADYFLALESARKISANITQMLQGRLMSNGVPMASALTVEVFPYSV 1092
Query: 625 FYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMG 680
FY+++EQYL +W L ++ I++ ++FVV + SA+++++ ++V +G
Sbjct: 1093 FYVFYEQYLTMWSDTLQSMGISVLSIFVVTFVLMGFDVHSALVVVITITMIVVNLG 1148
>DICTYBASE|DDB_G0269158 [details] [associations]
symbol:npcA "Niemann-Pick C type protein"
species:44689 "Dictyostelium discoideum" [GO:0030301 "cholesterol
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 dictyBase:DDB_G0269158
GO:GO:0016021 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0030301 GO:GO:0008158 eggNOG:NOG149152 KO:K12385
TIGRFAMs:TIGR00917 ProtClustDB:CLSZ2430881 EMBL:AF202725
EMBL:AF202726 RefSeq:XP_646800.1 ProteinModelPortal:Q9TVK6
EnsemblProtists:DDB0191127 GeneID:8617773 KEGG:ddi:DDB_G0269158
InParanoid:Q9TVK6 OMA:SHVVKYF Uniprot:Q9TVK6
Length = 1342
Score = 511 (184.9 bits), Expect = 4.3e-116, Sum P(3) = 4.3e-116
Identities = 112/254 (44%), Positives = 162/254 (63%)
Query: 517 GVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYEN 576
G C CF S+ + RP F + LP+FLN +ASC G AYT+ + N
Sbjct: 1054 GADPSCAPCF--SNNAQGRPDPQSFIQYLPFFLNVSNTASCPLAGL-AYTSDAHIV---N 1107
Query: 577 GIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIW 636
G + AS F YHT L Q DY+N+++ A + SD L +E+ YS+ Y+YF+QYL I
Sbjct: 1108 GTIVASRFDGYHTTLRTQDDYINAVQTAYYLADN-SD-LDVEV--YSIIYVYFDQYLTIK 1163
Query: 637 RTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVN 696
A++++ +A+G VF+VCLI + S ++++ + MI VDL+G+MA+ I LNAVSVVN
Sbjct: 1164 SVAIMDILLALGGVFIVCLILLLNPLVSFLVVISVGMICVDLLGIMALWNISLNAVSVVN 1223
Query: 697 LVMAVGIAVEFCVHITHAF--SVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 754
+VMA+GI +EFCVHI F + ++Q+ K A+ MG+S+ SGI +TKL+GV+VL F
Sbjct: 1224 VVMAIGIGIEFCVHIASTFINAPKHFSRDQKAKYAVTEMGSSIISGIFITKLLGVVVLGF 1283
Query: 755 SRTEVFVVYYFQMY 768
S +E+F VYYF+MY
Sbjct: 1284 STSEIFTVYYFRMY 1297
Score = 478 (173.3 bits), Expect = 4.3e-116, Sum P(3) = 4.3e-116
Identities = 128/368 (34%), Positives = 186/368 (50%)
Query: 1 MISLTDICMKPLGQDCATQSV--LQYFKMDPKNF--DDFGGVEHVKYCFQHYTSTESCMS 56
+I+L +C KP + C +S L + N+ + G + + + C Q CM
Sbjct: 521 LITLDSLCFKPTKRGCLIESTSGLWQRNISKLNYTQSEEGVLTYYENC-QSSLLQPDCMD 579
Query: 57 AFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDE 116
+ P+ P LGG+ NN S ASAFVVT+ +NN D A+AWE+ ++ D
Sbjct: 580 SVGAPVQPRVVLGGWENNNSSAASAFVVTFLLNNPTDM----VNTAMAWEQVWL----DH 631
Query: 117 LLPMVQSKNL-TLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDT-PHLSS 174
+ + + + + +S+E S+++EL RE AD TI+ISY VMF Y+SL+LG P +
Sbjct: 632 ISAIAATSEIFDITYSAERSVQDELSREGNADIPTILISYFVMFFYVSLSLGSYYPFPTR 691
Query: 175 F---YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCI 231
F ++ S +K+TLII EVIPFLVLA+GVDN+ I
Sbjct: 692 FLSLFVRSRFALGFCGIIIVAASIVISVGVCSMANLKATLIISEVIPFLVLAIGVDNIFI 751
Query: 232 LV------HAVK----RQQLELPL-ETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
+V H V+ + LP E ++ L +VGPSI LASLSE LAF +GS MP
Sbjct: 752 IVNTFESLHVVRYDPHTRAAILPTSEDSLARTLAKVGPSIALASLSESLAFLLGSLTKMP 811
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKL----SSSYADSD 336
A + FS Q++AF AL+V D RA +R+DC+PC+ L +S D D
Sbjct: 812 AVQAFSYYAALAIFVDFLLQVSAFSALLVLDSKRASSRRIDCLPCIALEDGDNSDMEDDD 871
Query: 337 KGIGQRKP 344
++ P
Sbjct: 872 DEENEKLP 879
Score = 273 (101.2 bits), Expect = 4.3e-116, Sum P(3) = 4.3e-116
Identities = 60/155 (38%), Positives = 90/155 (58%)
Query: 342 RKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSY 401
+K LL K+ +A L K+ VI FV L I ++ GL+Q++ LP +SY
Sbjct: 903 KKTTLLQVVFKKFYAPFLLHPITKMLVIIFFVGLLLTGINFAFQVSIGLDQRVALPSNSY 962
Query: 402 LQGYFNNISEHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIP 460
LQGYFNN++ L +GPP Y V+K +YNY+ Q N+LC++ CD +S++N + A P
Sbjct: 963 LQGYFNNMANLLEVGPPFYIVIKGDYNYTDFESQ-NKLCTMGGCDKDSIVNVFNNA---P 1018
Query: 461 QSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGS 495
+I K +SWLDD++ + + CC K+ NGS
Sbjct: 1019 ---FINKGISSWLDDYISFAQAQG-SCCLKYPNGS 1049
>UNIPROTKB|O15118 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0016242 "negative regulation of macroautophagy"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=IEA] [GO:0071404 "cellular response to
low-density lipoprotein particle stimulus" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0007041 "lysosomal transport"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis"
evidence=ISS;IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0030301 "cholesterol transport" evidence=IDA]
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0015485 "cholesterol binding"
evidence=IDA] [GO:0006486 "protein glycosylation" evidence=IDA]
[GO:0006914 "autophagy" evidence=IGI] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0004888 "transmembrane signaling
receptor activity" evidence=TAS] [GO:0015248 "sterol transporter
activity" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0033344 "cholesterol efflux" evidence=IDA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005794
GO:GO:0005635 GO:GO:0048471 GO:GO:0005576 GO:GO:0005887
GO:GO:0031902 GO:GO:0005765 GO:GO:0042493 GO:GO:0008206
GO:GO:0006914 GO:GO:0006486 GO:GO:0008203 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0015485 GO:GO:0033344
GO:GO:0042632 GO:GO:0031982 GO:GO:0004888 GO:GO:0007041
GO:GO:0007628 GO:GO:0008158 GO:GO:0071383 GO:GO:0016242
GO:GO:0015248 GO:GO:0071404 eggNOG:NOG149152 KO:K12385 OMA:DGYDLVQ
EMBL:AF002020 EMBL:AF157379 EMBL:AF157365 EMBL:AF157366
EMBL:AF157367 EMBL:AF157368 EMBL:AF157369 EMBL:AF157370
EMBL:AF157371 EMBL:AF157372 EMBL:AF157373 EMBL:AF157374
EMBL:AF157375 EMBL:AF157376 EMBL:AF157377 EMBL:AF157378
EMBL:AF338230 EMBL:AH009108 EMBL:BC063302 IPI:IPI00005107
RefSeq:NP_000262.2 UniGene:Hs.464779 UniGene:Hs.715623 PDB:3GKH
PDB:3GKI PDB:3GKJ PDBsum:3GKH PDBsum:3GKI PDBsum:3GKJ
ProteinModelPortal:O15118 SMR:O15118 IntAct:O15118 STRING:O15118
TCDB:2.A.6.6.1 PhosphoSite:O15118 PaxDb:O15118 PeptideAtlas:O15118
PRIDE:O15118 Ensembl:ENST00000269228 GeneID:4864 KEGG:hsa:4864
UCSC:uc002kum.4 CTD:4864 GeneCards:GC18M021111 H-InvDB:HIX0039703
HGNC:HGNC:7897 HPA:HPA026618 MIM:257220 MIM:607623
neXtProt:NX_O15118 Orphanet:216986 Orphanet:216981 Orphanet:216978
Orphanet:216975 Orphanet:216972 PharmGKB:PA31698 HOVERGEN:HBG003913
InParanoid:O15118 OrthoDB:EOG46DM1Z PhylomeDB:O15118
ChEMBL:CHEMBL1293277 EvolutionaryTrace:O15118 GenomeRNAi:4864
NextBio:18738 ArrayExpress:O15118 Bgee:O15118 CleanEx:HS_NPC1
Genevestigator:O15118 GermOnline:ENSG00000141458 TIGRFAMs:TIGR00917
Uniprot:O15118
Length = 1278
Score = 1135 (404.6 bits), Expect = 3.9e-115, P = 3.9e-115
Identities = 280/796 (35%), Positives = 432/796 (54%)
Query: 2 ISLTDICMKPLGQ---DCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAF 58
++L DIC+ PL +C SVL YF+ D G + Y H T C+ A
Sbjct: 462 VTLQDICLAPLSPYNTNCTILSVLNYFQNSHSVLDHKKGDDFFVYADYH-THFLYCVRAP 520
Query: 59 KGPLDPST----ALGGFSG--------NNYSEASAFVVT-YPVNNAVDREGNETKKAVAW 105
D S LG F G Y + + T + V+ N+T+K
Sbjct: 521 ASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKL--- 577
Query: 106 EKAFVQLAKDELLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
++A Q + E + V++ NLT++F++E SIE+EL RES +D T+VISY +MF YI
Sbjct: 578 QRA--QAWEKEFINFVKNYKNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYI 635
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
SL LG + FS IG+ TLI++EVIPFLVL
Sbjct: 636 SLALGHMKSCRRLLVDSKVSLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVL 695
Query: 223 AVGVDNMCILVHAVKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ ILV A +R ++L+ L+ ++ L EV PS+ L+S SE +AF +G+ MP
Sbjct: 696 AVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMP 755
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A FS+ QIT FV+L+ D R E R+D C++ A+ +
Sbjct: 756 AVHTFSLFAGLAVFIDFLLQITCFVSLLGLDIKRQEKNRLDIFCCVR----GAEDGTSV- 810
Query: 341 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
Q L R+ K ++ +L ++ VI++FV SIA+ +++ GL+Q + +P DS
Sbjct: 811 QASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDS 870
Query: 401 YLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLI 459
Y+ YF +IS++L GPP+YFV++ ++Y+S Q N +C C+++SL+ +I A+ +
Sbjct: 871 YMVDYFKSISQYLHAGPPVYFVLEEGHDYTSSKGQ-NMVCGGMGCNNDSLVQQIFNAAQL 929
Query: 460 PQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVC 519
+ I +SW+DD+ W+ P++ CCR + V
Sbjct: 930 DNYTRIGFAPSSWIDDYFDWVKPQS-SCCR---------------VDNITDQFCNASVVD 973
Query: 520 KDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIV 579
C C + K RP F LP FL+ P+ C KGGH AY+++V++ V
Sbjct: 974 PACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRV 1033
Query: 580 QASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLD 634
A+ F TYHT L D++++++ AR +S V++++ + +FPYSVFY+++EQYL
Sbjct: 1034 GATYFMTYHTVLQTSADFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLT 1093
Query: 635 IWRTALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVS 693
I + NL +++GA+F+V ++ C WS+ I+ + M++V++ GVM + I LNAVS
Sbjct: 1094 IIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVS 1153
Query: 694 VVNLVMAVGIAVEFCVHITHAFSVS-SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVL 752
+VNLVM+ GI+VEFC HIT AF+VS G + +R +EAL MG+SVFSGITLTK G++VL
Sbjct: 1154 LVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVL 1213
Query: 753 CFSRTEVFVVYYFQMY 768
F+++++F ++YF+MY
Sbjct: 1214 AFAKSQIFQIFYFRMY 1229
>MGI|MGI:2685089 [details] [associations]
symbol:Npc1l1 "NPC1-like 1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=ISO] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0008202 "steroid metabolic process"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0017137 "Rab GTPase
binding" evidence=ISO] [GO:0030299 "intestinal cholesterol
absorption" evidence=ISO] [GO:0030301 "cholesterol transport"
evidence=ISO] [GO:0031489 "myosin V binding" evidence=ISO]
[GO:0042157 "lipoprotein metabolic process" evidence=ISO]
[GO:0042632 "cholesterol homeostasis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 MGI:MGI:2685089 GO:GO:0016021
GO:GO:0016324 GO:GO:0006695 GO:GO:0042632 GO:GO:0042157
GO:GO:0030299 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 HOVERGEN:HBG003913 TIGRFAMs:TIGR00917
HOGENOM:HOG000036674 CTD:29881 KO:K14461 OrthoDB:EOG490787
EMBL:AY437866 EMBL:AL607152 IPI:IPI00114063 RefSeq:NP_997125.2
UniGene:Mm.212492 ProteinModelPortal:Q6T3U4 SMR:Q6T3U4
STRING:Q6T3U4 PhosphoSite:Q6T3U4 PRIDE:Q6T3U4
Ensembl:ENSMUST00000004505 GeneID:237636 KEGG:mmu:237636
UCSC:uc007hyb.2 InParanoid:Q6T3U4 ChEMBL:CHEMBL1075296
NextBio:383428 Bgee:Q6T3U4 CleanEx:MM_NPC1L1 Genevestigator:Q6T3U4
GermOnline:ENSMUSG00000020447 Uniprot:Q6T3U4
Length = 1333
Score = 1088 (388.1 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 254/730 (34%), Positives = 396/730 (54%)
Query: 53 SCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQL 112
SC++ + P+ P A+GG+ G +YSEA A ++T+ +NN + A WE+AF L
Sbjct: 541 SCIADYGAPVFPFLAVGGYQGTDYSEAEALIITFSINN-YPADDPRMAHAKLWEEAF--L 597
Query: 113 AKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHL 172
+ + + +AFS+E S+E+E+ R + D ISYL++F YISL LG
Sbjct: 598 KEMQSFQRSTADKFQIAFSAERSLEDEINRTTIQDLPVFAISYLIVFLYISLALGSYSRW 657
Query: 173 SSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCIL 232
S + F+S +GV S+L+I++V+PFLVLAVG DN+ I
Sbjct: 658 SRVAVDSKATLGLGGVAVVLGAVVAAMGFYSYLGVPSSLVIIQVVPFLVLAVGADNIFIF 717
Query: 233 VHAVKRQQL-ELPLETR---ISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMX 288
V ++ Q+L +P E R I L V PS+ L SLSE + F +G+ MPA R F++
Sbjct: 718 V--LEYQRLPRMPGEQREAHIGRTLGSVAPSMLLCSLSEAICFFLGALTSMPAVRTFALT 775
Query: 289 XXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLA 348
Q+TAFVAL+ D R E R D + C SS K +K GLL
Sbjct: 776 SGLAIIFDFLLQMTAFVALLSLDSKRQEASRPDVVCCF--SSRNLPPPK----QKEGLLL 829
Query: 349 RYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNN 408
+ ++++ L ++ V+ LF+ A++ L I GL+Q + LP+DSYL YF
Sbjct: 830 CFFRKIYTPFLLHRFIRPVVLLLFLVLFGANLYLMCNISVGLDQDLALPKDSYLIDYFLF 889
Query: 409 ISEHLRIGPPLYF-VVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAK 467
++ +L +GPP+YF YN+S+E+ N +CS + C+S SL +I AS P SY+A
Sbjct: 890 LNRYLEVGPPVYFDTTSGYNFSTEAGM-NAICSSAGCESFSLTQKIQYASEFPNQSYVAI 948
Query: 468 PAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFH 527
A+SW+DDF+ W++P + CCR +T G + K+C
Sbjct: 949 AASSWVDDFIDWLTPSS-SCCRIYTRGPHKDEFCPSTDTSF--------NCLKNCM---- 995
Query: 528 HSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTY 587
+ L RP+T QF + LPWFLN P+ C KGG AY SV+L +G + AS F Y
Sbjct: 996 NRTLGPVRPTTEQFHKYLPWFLNDTPNIRCPKGGLAAYRTSVNLSS--DGQIIASQFMAY 1053
Query: 588 HTPLNRQIDYVNSMRAAREFSSRVSDSLQ--------MEIFPYSVFYMYFEQYLDIWRTA 639
H PL D+ ++RA+R ++ ++ L+ E+FPY++ ++++QYL +
Sbjct: 1054 HKPLRNSQDFTEALRASRLLAANITAELRKVPGTDPNFEVFPYTISNVFYQQYLTVLPEG 1113
Query: 640 LINLAIAIGAVFVVC-LITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
+ LA+ FVVC L+ S + LL + MI+VD +G+MA+ I NAVS++NLV
Sbjct: 1114 IFTLALCFVPTFVVCYLLLGLDIRSGILNLLSIIMILVDTIGLMAVWGISYNAVSLINLV 1173
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKN-QRMKEALGTMGASVFSGITLTKLVGVIVLCFSRT 757
AVG++VEF HIT +F+VS+ +R K+A MG++VF+G+ +T G+++L F++
Sbjct: 1174 TAVGMSVEFVSHITRSFAVSTKPTRLERAKDATIFMGSAVFAGVAMTNFPGILILGFAQA 1233
Query: 758 EVFVVYYFQM 767
++ +++F++
Sbjct: 1234 QLIQIFFFRL 1243
Score = 62 (26.9 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 2 ISLTDICMKPLGQ------DCATQSVLQYFK 26
ISL DIC PL DC S+LQYF+
Sbjct: 465 ISLQDICYAPLNPHNTSLTDCCVNSLLQYFQ 495
>UNIPROTKB|F1SSH5 [details] [associations]
symbol:NPC1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0030301 "cholesterol transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0006695 GO:GO:0042632 GO:GO:0042157 GO:GO:0030299
GO:GO:0008158 GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00917
OMA:FMAERSL EMBL:CU856650 Ensembl:ENSSSCT00000018228 Uniprot:F1SSH5
Length = 1332
Score = 1073 (382.8 bits), Expect = 4.3e-113, Sum P(2) = 4.3e-113
Identities = 275/823 (33%), Positives = 422/823 (51%)
Query: 15 DCATQSVLQYFKMDPKNF-----DDFGGV-------EHVKYC------FQHYTSTE-SCM 55
DC S+LQYF+ + + G +H YC F+ T+ SCM
Sbjct: 485 DCCVNSLLQYFQNNRTHLLLTANQTLSGQTSQVDWRDHFLYCANAPLTFKDGTALALSCM 544
Query: 56 SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 115
+ + P+ P A+GG+ G ++SEA A +VT+ +NN + +A WEKAF++ +
Sbjct: 545 ADYGAPVFPFLAVGGYKGKDFSEAEALIVTFSLNNYPPGDPR-LDQAKLWEKAFLE--EM 601
Query: 116 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 175
+ + F +E S+E+E+ + D +SY+V+F YISL LG
Sbjct: 602 QAFQRRMEGVFQVTFMAERSLEDEINSSTFQDLPIFAVSYIVIFLYISLALGTYSSWRRV 661
Query: 176 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 235
+ FF+ +GV S+L+I++V+PFLVLAVG DN+ I V
Sbjct: 662 LVDSKATLGLGGVVVVLGAVMASMGFFAYLGVPSSLVILQVVPFLVLAVGADNIFIFVLE 721
Query: 236 VKRQQLELPLETR---ISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXX 292
+R P E R I AL V PS+ L SLSE + F +G+ PMPA R F++
Sbjct: 722 YQRLPRN-PGEQREAHIGRALGRVAPSMLLCSLSEAICFFLGALTPMPAVRTFALISGLA 780
Query: 293 XXXXXXXQITAFVALIVFDFLRAEDKRVD-CIPCLKLSSSYADSDKGIGQRKPGLLARYM 351
Q++AFVAL+ D R E R+D C C K D + GLL
Sbjct: 781 VLLDFLLQMSAFVALLSLDSRRQEASRLDFC--CCK-----TPRDVPPPSQAEGLLLLCF 833
Query: 352 KEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISE 411
++ +A L W ++ V+ LF+A AS+ L I GL+Q++ LP+DSYL YF ++
Sbjct: 834 RKFYAPFLLHWFTRVVVMLLFLALFGASLYLMCFITVGLDQELALPKDSYLLDYFLFLNR 893
Query: 412 HLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAA 470
+ +GPP+YFV YN++SE N +CS + C++ SL +I A+ P SY+A PA+
Sbjct: 894 YFEVGPPVYFVTTGGYNFTSEEG-INAICSSAGCNNFSLTQKIQYATEFPDQSYLAIPAS 952
Query: 471 SWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSD 530
SW+DDF+ W+S + CCR + +G K C + F
Sbjct: 953 SWVDDFIDWLSSSS--CCRLYISGP--------NKDEFCPSTVSSLACLKTCIS-FTTGT 1001
Query: 531 LLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTP 590
+ RP+ QF LPWFLN +P+ C KGG GAY+ SV+L G +G V AS F YH P
Sbjct: 1002 V---RPTVEQFHRYLPWFLNDMPNIKCPKGGLGAYSTSVNL-G-PDGQVLASRFMAYHKP 1056
Query: 591 LNRQIDYVNSMRAAREFSSRVS-DSLQM-------EIFPYSVFYMYFEQYLDIWRTALIN 642
L DY ++RA+R ++ ++ D L++ ++FPY++ +++EQYL + L
Sbjct: 1057 LKNSQDYTEALRASRALAANITADLLKVPGTDPDFKVFPYTISNVFYEQYLTVVPEGLFM 1116
Query: 643 LAIAIGAVFVVC-LITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAV 701
L I + F+VC L+ S I L + MI+VD +G M + I NAVS++NLV AV
Sbjct: 1117 LGICLVPTFIVCCLLLGMDVRSGLINLFSIVMILVDTVGFMTLWNITYNAVSLINLVTAV 1176
Query: 702 GIAVEFCVHITHAFSVSSGDKN-QRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVF 760
GI+VEF HIT +F++S+ +R KEA +MG++VF+G+ +T L G++VL ++T++
Sbjct: 1177 GISVEFVSHITRSFAISTKPTRLERAKEATISMGSAVFAGVAMTNLPGILVLGLAKTQLI 1236
Query: 761 VVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGPPSRCMLVERQE 803
+++F++ S GP L+++Q+
Sbjct: 1237 QIFFFRLNLLITLLGLLHGLVFLPVVLSYVGPEVNPALLQQQK 1279
Score = 63 (27.2 bits), Expect = 4.3e-113, Sum P(2) = 4.3e-113
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 2 ISLTDICMKPLG------QDCATQSVLQYFK 26
ISL DIC PL DC S+LQYF+
Sbjct: 466 ISLQDICYAPLNPHNTSLSDCCVNSLLQYFQ 496
>DICTYBASE|DDB_G0276657 [details] [associations]
symbol:npcB "Niemann-Pick C type protein"
species:44689 "Dictyostelium discoideum" [GO:0030301 "cholesterol
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
dictyBase:DDB_G0276657 GO:GO:0016021 GO:GO:0030301 GO:GO:0008158
EMBL:AAFI02000018 eggNOG:NOG149152 TIGRFAMs:TIGR00917
RefSeq:XP_643013.1 ProteinModelPortal:Q551C5
EnsemblProtists:DDB0202935 GeneID:8620617 KEGG:ddi:DDB_G0276657
InParanoid:Q551C5 OMA:LTIWRET ProtClustDB:CLSZ2430881
Uniprot:Q551C5
Length = 1397
Score = 482 (174.7 bits), Expect = 1.4e-112, Sum P(4) = 1.4e-112
Identities = 105/259 (40%), Positives = 154/259 (59%)
Query: 535 RPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQ 594
RP FK+ LP FLN + C G AYT D+K +G + A+ F YHT L Q
Sbjct: 1130 RPDPSLFKKYLPAFLNFTNTDQCPLAGL-AYTG--DVKFNSDGSIAATRFDAYHTTLRTQ 1186
Query: 595 IDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVC 654
D++N++ S ++D ++F YS+FY YFE YL I + AL + +A+G+VF V
Sbjct: 1187 NDFINALAT----SYYLADHSDAQVFTYSIFYCYFEAYLTIKQVALKGILLALGSVFFVS 1242
Query: 655 LITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHA 714
L + S +++L + M VVDL+ VM + I LNA+SVVNL+MAVGI++EFCVHI
Sbjct: 1243 LAILMNPLVSILVVLCVGMTVVDLLAVMTLWDISLNAISVVNLIMAVGISIEFCVHIAST 1302
Query: 715 F--SVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYXXXX 772
F S +++++K A+ MGA++FSGI +TKL+G +VL FS++E+F++YYF+MY
Sbjct: 1303 FIRSPKHYSRDEKVKFAISEMGANIFSGIFITKLLGCVVLAFSKSEIFIIYYFKMYISIC 1362
Query: 773 XXXXXXXXXXXXXXXSVFG 791
S+FG
Sbjct: 1363 LLAAVHGLVLLPVLLSIFG 1381
Score = 298 (110.0 bits), Expect = 1.4e-112, Sum P(4) = 1.4e-112
Identities = 80/240 (33%), Positives = 125/240 (52%)
Query: 1 MISLTDICMKPLGQDCATQSVLQYFKMDPK--NFDDFGGVEHVKYCFQHYTSTESCMSAF 58
+I+L +C +P + C +S+ F+ D N + + C S E CM +
Sbjct: 521 IITLDQLCFEPTKRGCLVESITGIFQRDQNKLNQQKDNVIGWFEQCKSQLLSPE-CMDST 579
Query: 59 KGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELL 118
P++P LGG++ N+ + A AFV T+ +NN + +++ WE+ V L K + +
Sbjct: 580 GVPVNPKIVLGGWNDNS-TLAKAFVTTFLLNNP----DSMIDRSMMWEQ--VWLNKIQEI 632
Query: 119 PMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDT-P---HLSS 174
S ++F+++ S+++EL RE AD TI++SY VMF YISL+LG P +S
Sbjct: 633 SNDPSCPFEISFNAQRSVQDELAREGNADIPTIIVSYFVMFLYISLSLGSYYPFPRRFNS 692
Query: 175 FYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVH 234
F+I S + +K+TLII EVIPFLVLA+GVDN+ ILV+
Sbjct: 693 FFIRSRFALGLSGICIVACSIIISVGICSILRIKATLIISEVIPFLVLAIGVDNIFILVN 752
Score = 291 (107.5 bits), Expect = 1.4e-112, Sum P(4) = 1.4e-112
Identities = 64/157 (40%), Positives = 93/157 (59%)
Query: 341 QRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
++K LL + +A L K+ +I F+A L SI +I GL+QK+ LPR+S
Sbjct: 963 KKKTTLLKELFTKYYAPFLVHPISKLLIIIFFIAMLLFSINYAYQIPIGLDQKVALPRNS 1022
Query: 401 YLQGYFNNISEHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLI 459
YLQ YF N+++ L +GPP+Y VVK NY++S S Q NQ C++ C++NS++N A
Sbjct: 1023 YLQAYFTNMNQFLEVGPPMYIVVKGNYDFSIPSIQ-NQFCTVGGCNNNSVINTFDNA--- 1078
Query: 460 PQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSY 496
P +I+ +SWLDD L W + GCC F NG+Y
Sbjct: 1079 P---FISPGISSWLDDMLQWSN--TVGCCTAFDNGTY 1110
Score = 208 (78.3 bits), Expect = 1.4e-112, Sum P(4) = 1.4e-112
Identities = 49/131 (37%), Positives = 67/131 (51%)
Query: 204 AIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLA 263
AIGV + I++ L +A + I Q+ P E+ + L +VGPSI LA
Sbjct: 741 AIGVDNIFILVNTFESLHVASSSSSSSISGFNQNHHQMPTPEES-FARTLAKVGPSIALA 799
Query: 264 SLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCI 323
SLSE AF +GS MPA + FS QI+AF L+V D R + +RVDC+
Sbjct: 800 SLSESFAFLLGSLTKMPAVKAFSFYASIAVFFDFLLQISAFACLLVLDTKRLQSRRVDCL 859
Query: 324 PCLKLSSSYAD 334
PCL L+ +D
Sbjct: 860 PCLSLNGDNSD 870
Score = 43 (20.2 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 335 SDKGIGQRKPGLLARYMK-EV-HATILSLWGVKIAVISLFVAFTL 377
S K IG ++ ++ EV H TI +W + ++SL F++
Sbjct: 220 SYKDIGLLNDTIIQTHLLIEVPHLTIWIVWSFLLFLLSLLFGFSI 264
>CGD|CAL0003873 [details] [associations]
symbol:NCR1 species:5476 "Candida albicans" [GO:0000329
"fungal-type vacuole membrane" evidence=IEA] [GO:0046624
"sphingolipid transporter activity" evidence=IEA] [GO:0006665
"sphingolipid metabolic process" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 CGD:CAL0003873
GO:GO:0016021 GO:GO:0008158 EMBL:AACQ01000092 eggNOG:NOG149152
KO:K12385 RefSeq:XP_715042.1 ProteinModelPortal:Q59ZV0
GeneID:3643314 KEGG:cal:CaO19.7242 Uniprot:Q59ZV0
Length = 1256
Score = 980 (350.0 bits), Expect = 7.1e-111, Sum P(2) = 7.1e-111
Identities = 234/728 (32%), Positives = 382/728 (52%)
Query: 2 ISLTDICMKPLGQDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGP 61
+ L+DIC KPL + CA QS QYF+ D + ++ C S +C+ F+ P
Sbjct: 447 VRLSDICFKPLDETCALQSFTQYFQGDISGLTETNWKSKLQSCVD---SPVNCLPTFQQP 503
Query: 62 LDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMV 121
L P+ F N+ S+A AF VT VN+ E N T +++E +F + A D
Sbjct: 504 LKPNIL---FDSNDISQAKAFTVTVLVNSDTQNE-NYTSNTISYEHSFQKWAADL---QT 556
Query: 122 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFY--IXX 179
+ NL +A+S+E S++EEL + S D TI ISYLVMF Y SL LG ++ Y +
Sbjct: 557 EYPNLNIAYSTEISLKEELNQSSNTDIKTIAISYLVMFIYASLALGGKLPSANLYSLVKT 616
Query: 180 XXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVH---AV 236
FFS IG++STLII EVIPFLVLA+G+DN+ ++VH +
Sbjct: 617 RFTLGFSSIIIILLSVTASVGFFSIIGLRSTLIIAEVIPFLVLAIGIDNIFLIVHELHVI 676
Query: 237 KRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXX 296
L LE RIS AL +GPS ++++ +V F + + + MPA + F+
Sbjct: 677 SEGNPNLALEVRISQALKHIGPSCFISAVLQVCMFLLATSVGMPAVKNFAYYGAGAVLIN 736
Query: 297 XXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQ--RKPGLLARYMKEV 354
Q+T F+ L+ D R ED RVD +P + +S + I + +R++ +
Sbjct: 737 FSLQMTCFIGLLALDQRRLEDNRVDYVPWVTISPIQLQDNDEIDEPVHLEYNFSRWIGDH 796
Query: 355 HATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLR 414
+A L K VI+LFV + S++L +I+ GL+Q+I +P SYL YFN++ ++L
Sbjct: 797 YAPFLLKKTTKPKVITLFVLWVGISLSLFPKIQLGLDQRIAIPSKSYLVNYFNSVYDYLN 856
Query: 415 IGPPLYFVVKNYNYSSESRQTNQLCS-ISQCDSNSLLNEISRASLIPQSSYIAKPAASWL 473
+GPP++FVVK+ +YS S Q ++C S CD SL N + + S +++PA++WL
Sbjct: 857 VGPPVFFVVKDLDYSERSNQ-QKICGGFSACDEFSLANILEQEFKRSDISMLSEPASNWL 915
Query: 474 DDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCF-HHSDLL 532
DDF W++P+ CCR F + + C +C+ +H+
Sbjct: 916 DDFFSWLNPDLDQCCR-FKKSTVFEKTPEFCSPNAPQ---------RQCQSCYLNHNPPY 965
Query: 533 KDRPSTIQFKEKLPWFLNAL--PSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTP 590
++ + +F + + PS C GG A+ ++ + E + +S FRT P
Sbjct: 966 DSSMKAFPERDFMFYFNDWIQEPSDPCPLGGKAAHGQAIS-RTTEK--IDSSYFRTSFAP 1022
Query: 591 LNRQIDYVNSMRAAREFSSRVSDSL-QMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGA 649
L Q +++N+ ++ ++ + M++F YS F+++F QY +I + L +A+
Sbjct: 1023 LRGQDEFINAYKSGNNIVKEITKLIPSMDVFAYSPFFIFFTQYQNIVLLTVALLTVAMLI 1082
Query: 650 VFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCV 709
++V+ SF +++I+ + +T I++++ GV+A+ I LNAV++VNLV+ VG AVEF +
Sbjct: 1083 IYVISTFLLSSFRAASILTITITAIMINIGGVLALWSISLNAVTLVNLVICVGFAVEFTI 1142
Query: 710 HITHAFSV 717
H+T A+ V
Sbjct: 1143 HLTRAYCV 1150
Score = 135 (52.6 bits), Expect = 7.1e-111, Sum P(2) = 7.1e-111
Identities = 24/53 (45%), Positives = 41/53 (77%)
Query: 716 SVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMY 768
S+++ +N + AL ++G S+ SG+TLTKL+G+ VL F+R+++F VYYF+M+
Sbjct: 1183 SLNAEFRNTKAHNALCSVGGSLISGVTLTKLIGISVLAFTRSQIFEVYYFRMW 1235
>UNIPROTKB|E1BPS5 [details] [associations]
symbol:NPC1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0030301 "cholesterol transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0006695 GO:GO:0042632 GO:GO:0042157 GO:GO:0030299
GO:GO:0008158 GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00917
CTD:29881 KO:K14461 OMA:FMAERSL EMBL:DAAA02011180 IPI:IPI00699799
RefSeq:XP_002686936.1 RefSeq:XP_588051.4 Ensembl:ENSBTAT00000061036
GeneID:539550 KEGG:bta:539550 NextBio:20878066 Uniprot:E1BPS5
Length = 1333
Score = 1054 (376.1 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 269/830 (32%), Positives = 419/830 (50%)
Query: 15 DCATQSVLQYFKMDPKNF-----DDFGGV-------EHVKYC------FQHYTSTE-SCM 55
DC S+LQYF+ + G +H YC ++ T+ SCM
Sbjct: 486 DCCVNSLLQYFQNNRTQLLLTANQTLSGQTAQVDWRDHFLYCANAPLTYKDGTALALSCM 545
Query: 56 SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 115
+ + P+ P A+GG+ G +YSEA A ++T+ +NN + + +A WE AF++ +
Sbjct: 546 ADYGAPIFPFLAVGGYKGKDYSEAEALIMTFSLNNYPPGDP-KLAQAKLWEAAFLEEMR- 603
Query: 116 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 175
+ + F +E S+E+E+ + D +SYLV+F YISL LG
Sbjct: 604 -AFQRRTAGVFQVTFMAERSLEDEINSTTAEDLPVFAVSYLVIFLYISLALGSYSSWRRV 662
Query: 176 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 235
+ FFS +GV S+L+I++V+PFLVLAVG DN+ I V
Sbjct: 663 PVDSKATLGLGGVAVVLGAVVASMGFFSYLGVPSSLVILQVVPFLVLAVGADNIFIFV-- 720
Query: 236 VKRQQL-ELPLETR---ISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXX 291
++ Q+L P E R I AL V PS+ L SLSE + F +G+ PMPA R F++
Sbjct: 721 LEYQRLPRRPGEEREAHIGRALGRVAPSMLLCSLSEAICFFLGALTPMPAVRTFALTSGF 780
Query: 292 XXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYM 351
Q++AFVAL+ D R E R+D I C K + + GLL R+
Sbjct: 781 AVLLDFLLQMSAFVALLSLDSRRQEASRMD-ICCCKTAQKLPPPSQD-----EGLLLRFF 834
Query: 352 KEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISE 411
++ + L W ++ V+ LF+A AS+ I GL+Q++ LP+DSYL YF ++
Sbjct: 835 RKFYVPFLLHWLTRVVVVLLFLALFAASLYFMCYINVGLDQQLALPKDSYLIDYFLFMNR 894
Query: 412 HLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAA 470
+ +G P+YFV YN+SSE N +CS + C++ SL +I A+ P SY+A PA+
Sbjct: 895 YFEVGAPVYFVTTGGYNFSSEEGM-NAICSSAGCNNFSLTQKIQYATDFPDMSYLAIPAS 953
Query: 471 SWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSD 530
SW+DDF+ W++ + CCR + +G K C + S
Sbjct: 954 SWVDDFIDWLTSSS--CCRLYISGP--------NKDEFCPSTVNSLACLKTCVSPTAGSA 1003
Query: 531 LLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTP 590
RPS QF + LPWFL+ P+ C KGG AY+ SV++ +G + AS F Y+ P
Sbjct: 1004 ----RPSVEQFHKYLPWFLSDEPNIKCPKGGLAAYSTSVNMSS--DGQILASRFMAYNKP 1057
Query: 591 LNRQIDYVNSMRAAREFSSRVSDSLQ--------MEIFPYSVFYMYFEQYLDIWRTALIN 642
L D+ ++RA R ++ ++ L+ E+FPYSV +++EQYL I L
Sbjct: 1058 LKNSRDFTEALRATRALAANITADLRKVPGTDPDFEVFPYSVTNVFYEQYLTIVPEGLFM 1117
Query: 643 LAIAIGAVFVVC-LITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAV 701
L I + FVVC + S + L + MI+VD +G M + I NAVS++NLV AV
Sbjct: 1118 LTICLVPTFVVCCFLLGMDVRSGLLNLFSIIMILVDTVGFMMLWDISYNAVSLINLVTAV 1177
Query: 702 GIAVEFCVHITHAFSVSSGDKN-QRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVF 760
GI+VEF HIT +F++S+ +R KEA +MG++VF+G+ +T L G++VL ++ ++
Sbjct: 1178 GISVEFVSHITRSFAISTKPTRLERAKEATISMGSAVFAGVAMTNLPGILVLGLAKAQLI 1237
Query: 761 VVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGPPSRCMLVERQEERPSVSS 810
+++F++ S GP LV++Q+++ ++
Sbjct: 1238 QIFFFRLNLLITVLGLLHGLVFLPVILSYLGPDVNPALVQQQKQQEEAAA 1287
Score = 57 (25.1 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 2 ISLTDICMKPLG------QDCATQSVLQYFK 26
+SL D C PL DC S+LQYF+
Sbjct: 467 VSLRDTCYAPLNPHNASLSDCCVNSLLQYFQ 497
>FB|FBgn0261675 [details] [associations]
symbol:Npc1b "Niemann-Pick type C-1b" species:7227
"Drosophila melanogaster" [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007391 "dorsal closure"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] [GO:0030299 "intestinal
cholesterol absorption" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0007391 EMBL:AE014298 GO:GO:0007422 GO:GO:0007417
GO:GO:0030299 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 KO:K12385 OrthoDB:EOG4JSXMB
OMA:SHVVKYF RefSeq:NP_608417.2 UniGene:Dm.26685
ProteinModelPortal:Q9VRC9 SMR:Q9VRC9 IntAct:Q9VRC9 MINT:MINT-759716
STRING:Q9VRC9 EnsemblMetazoa:FBtr0077239 GeneID:33072
KEGG:dme:Dmel_CG12092 UCSC:CG12092-RA CTD:33072 FlyBase:FBgn0261675
InParanoid:Q9VRC9 PhylomeDB:Q9VRC9 GenomeRNAi:33072 NextBio:781802
ArrayExpress:Q9VRC9 Bgee:Q9VRC9 Uniprot:Q9VRC9
Length = 1254
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 268/829 (32%), Positives = 415/829 (50%)
Query: 11 PLGQDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCM---------SAFKGP 61
P CA QSV YF+ D F++ V+ Y + E C+ F GP
Sbjct: 449 PTVDRCAIQSVYGYFQHDMDRFEN-SYVDSNNYTINYLNQLEDCLRVPMMEDCFGTFGGP 507
Query: 62 LDPSTALGGFS----GNN--YSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 115
++P A+GG G + Y A+ V+T+ N D E + WEK FV +D
Sbjct: 508 IEPGIAVGGMPKVAVGEDPDYMLATGLVLTFLGRNYNDESKLEPN--MKWEKLFVDFLRD 565
Query: 116 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 175
+S L +A+ +E SI++ + S + T+VISY+VMF Y+++ LG F
Sbjct: 566 -----YKSDRLDIAYMAERSIQDAIVELSEGEVSTVVISYVVMFVYVAIALGHIRSCRGF 620
Query: 176 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 235
F+ + V +T++ +EVIPFLVLAVGVDN+ I+VH
Sbjct: 621 LRESRIMLAIGGIVIVLASVVCSLGFWGYLDVTTTMLAIEVIPFLVLAVGVDNIFIMVHT 680
Query: 236 VKRQQLELPLETR--ISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXX 293
+R T I A+ +VGPSI + SE+ FA+G MPA + F+M
Sbjct: 681 YQRLDHSKFKTTHEAIGEAIGQVGPSILQTAGSEMACFAIGCISDMPAVKTFAMYAAIAI 740
Query: 294 XXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKP---GLLARY 350
QITAFVAL+ D R D R+D + C+K + + G G +P GLL
Sbjct: 741 LLDFLLQITAFVALMAIDEKRYLDGRLDMLCCVKSGGKKINDEDGDGVDRPKEVGLLETL 800
Query: 351 MKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNIS 410
K ++ L VK++V+ +F T S+ + IE GL+Q++ +P++S++ YF +
Sbjct: 801 FKNFYSPFLLSKPVKVSVLLIFTVITCLSLMVTPSIEKGLDQEMSMPKNSHVVKYFRYMV 860
Query: 411 EHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPA 469
+ L +G P+Y+V+K NYS E Q N +C +C++NSL ++ + P+ + +A+PA
Sbjct: 861 DLLAMGAPVYWVLKPGLNYS-EPLQQNLICGGVECNNNSLSVQLYTQAQYPEITSLARPA 919
Query: 470 ASWLDDFLVWISPEAFGCCR-KFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHH 528
+SWLDD++ W++ CC+ T G + C C F
Sbjct: 920 SSWLDDYIDWLAIS--DCCKYNVTTGGFCSSNSKSED-------------CLPCERGFTE 964
Query: 529 SDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI--VQASSFRT 586
+ L RP F + +P+FL LP A CAK G +Y ++V + G+ VQ S F
Sbjct: 965 NGL---RPDAETFNKYIPYFLFDLPDAECAKAGRASYADAVIYTIDDVGMSTVQDSYFMQ 1021
Query: 587 YHTPLNRQIDYVNSMRAAREFSSRVS-----DSLQMEIFPYSVFYMYFEQYLDIWRTALI 641
Y T ++ + +R R S ++ +++ EIF Y VFY+Y+EQYL IW A+
Sbjct: 1022 YSTTSTTSEEFYSQLREVRRISGEINAMFKENNVDAEIFAYCVFYIYYEQYLTIWGDAMF 1081
Query: 642 NLAIAIGAVFVVCL-ITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMA 700
+L +++ A+F+V L IT S+ I+L ++ I+++++G+M I LNA+S+VNLV+
Sbjct: 1082 SLGMSLVAIFLVTLLITGLDITSTFIVLFMVICILINMLGMMWAWSINLNAISLVNLVVC 1141
Query: 701 VGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVF 760
VGI VEF HI +F + G +R + +L G+SV SGITLTK G++VL FS +++F
Sbjct: 1142 VGIGVEFVAHIVRSFKRAEGTAQERARHSLNVTGSSVLSGITLTKFAGIVVLGFSNSQIF 1201
Query: 761 VVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGPPSRCMLVERQEERPSVS 809
V+YF+MY S+ GPP + L P+ S
Sbjct: 1202 QVFYFRMYLGIVLIGAAHGLILLPVLLSLLGPPQK--LARSSGAEPTAS 1248
>UNIPROTKB|G4NE97 [details] [associations]
symbol:MGG_00819 "Niemann-Pick C1 protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000731 InterPro:IPR004765 PROSITE:PS50156
GO:GO:0016021 EMBL:CM001235 GO:GO:0030301 KO:K12385
TIGRFAMs:TIGR00917 RefSeq:XP_003718164.1 ProteinModelPortal:G4NE97
EnsemblFungi:MGG_00819T0 GeneID:2674383 KEGG:mgr:MGG_00819
Uniprot:G4NE97
Length = 1275
Score = 597 (215.2 bits), Expect = 2.6e-103, Sum P(2) = 2.6e-103
Identities = 147/502 (29%), Positives = 244/502 (48%)
Query: 4 LTDICMKPLGQDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLD 63
L D+C+KP G C QSV YF D N G +++ C + P
Sbjct: 452 LQDVCLKPTGSACVVQSVAAYFGNDADNVSKGGWKGNLRDCARSPVECRPDFGQPIDPGM 511
Query: 64 PSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAK--DELLPMV 121
G +G++ ++A A VT+ +NN + E + E +L K +E
Sbjct: 512 ILGGYG--AGDDIADAQAMTVTWVLNNFPEGTSEEARAMDFEEALKNRLLKLQEEAADRG 569
Query: 122 QSKNLTLAFSSESSIEEELKRESTADAITIVISYL-VMFAYISLTLGDTPHL---SSFYI 177
+ + S E + + ++ I+ ++ +L A S TL S F++
Sbjct: 570 LRLSFSTEISLEQELNKSTNTDAKIIVISYIVMFLYASIALGSTTLNFREFFRNKSLFFV 629
Query: 178 XXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVK 237
FS G+K TLII++VIPF+VLAVGVDN+ ++VH +
Sbjct: 630 QSKFGLGIVGIAIVLLSIMASIGLFSWFGLKVTLIIVDVIPFIVLAVGVDNIFLIVHEFE 689
Query: 238 RQQL---ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXX 294
R + +L +E RI+ AL +GPSI ++++E +FA+G+F+ MPA R F++
Sbjct: 690 RVNISHPDLDVELRIAKALGRMGPSILFSAVTETASFALGAFVGMPAVRNFAIYAAGAVF 749
Query: 295 XXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSS--YADSDKGIGQR-----KPGLL 347
Q+T FV+ + + R ED R+D PC++L S+ + + +G R + +L
Sbjct: 750 INALLQVTMFVSFLTLNQQRVEDCRMDLFPCVQLKSARIHLNGTGNLGPRYHEAPQESML 809
Query: 348 ARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFN 407
+++++ +A L VK V+ +F+ A ++L +E GL+Q++ +P DSYL YFN
Sbjct: 810 QQFIRKYYAPALLGKKVKAVVVLVFLGVFTAGVSLIPEVELGLDQRVAIPDDSYLIPYFN 869
Query: 408 NISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAK 467
++ + GPP+YFV K N++ Q + C+ S+ N + + P+ SYIA
Sbjct: 870 DLYAYFESGPPVYFVTKESNFTQREHQQEVCARFTTCNELSMTNILEQERKRPEISYIAS 929
Query: 468 PAASWLDDFLVWISPE-AFGCC 488
P ASW+DDF +W+ P+ CC
Sbjct: 930 PTASWIDDFFLWLDPDLGESCC 951
Score = 468 (169.8 bits), Expect = 2.6e-103, Sum P(2) = 2.6e-103
Identities = 98/244 (40%), Positives = 149/244 (61%)
Query: 536 PSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQI 595
P +F L F+ + + C GG AY ++V + +E + AS FRT HTPL Q
Sbjct: 974 PKGQEFVHYLDKFIQSPTTEECPLGGQAAYGDAVVID-HEKTTIGASHFRTMHTPLRSQS 1032
Query: 596 DYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCL 655
D++ + +AR ++ +S E+FPYSVFY++F+QY I L + A+ +FV+
Sbjct: 1033 DFIKAYASARRIANDISAQTGTEVFPYSVFYIFFDQYASIVDLTLALVGSALALIFVIST 1092
Query: 656 ITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAF 715
+ SF ++A++ + + M VVD++G MA++ + LNAVS+VNL++ VGIAVEFCVHI AF
Sbjct: 1093 VLLGSFITAAVVTVTVMMAVVDIVGAMAVMGVSLNAVSLVNLIICVGIAVEFCVHIARAF 1152
Query: 716 SVSSGDKNQRMKE-----------ALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYY 764
S +R K AL +G SVFSGIT+TKL+GV VL F+R+++F +YY
Sbjct: 1153 MFPSRTFMERAKNRFRGRDARTWTALANVGGSVFSGITVTKLLGVTVLAFTRSKIFEIYY 1212
Query: 765 FQMY 768
F+++
Sbjct: 1213 FRVW 1216
>UNIPROTKB|B7ZLE6 [details] [associations]
symbol:NPC1L1 "Niemann-Pick C1-like protein 1" species:9606
"Homo sapiens" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 EMBL:AC004938 HOVERGEN:HBG003913
UniGene:Hs.567486 HGNC:HGNC:7898 EMBL:BC143756 IPI:IPI01013791
SMR:B7ZLE6 STRING:B7ZLE6 Ensembl:ENST00000546276 UCSC:uc011kbw.2
Uniprot:B7ZLE6
Length = 1286
Score = 597 (215.2 bits), Expect = 4.1e-103, Sum P(3) = 4.1e-103
Identities = 139/393 (35%), Positives = 222/393 (56%)
Query: 388 PGLEQKIVLP--RDSYLQGYFNNISEHLRIGPPLYFVVK-NYNYSSESRQTNQLCSISQC 444
PG + ++L + +Y + I+ + +G P+YFV YN+SSE+ N +CS + C
Sbjct: 821 PGQGEGLLLGFFQKAYAPFLLHWITRGVVVGAPVYFVTTLGYNFSSEAGM-NAICSSAGC 879
Query: 445 DSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXX 504
++ S +I A+ P+ SY+A PA+SW+DDF+ W++P + CCR + +G
Sbjct: 880 NNFSFTQKIQYATEFPEQSYLAIPASSWVDDFIDWLTPSS--CCRLYISGP--------N 929
Query: 505 XXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGA 564
K+C + S RPS QF + LPWFLN P+ C KGG A
Sbjct: 930 KDKFCPSTVNSLNCLKNCMSITMGSV----RPSVEQFHKYLPWFLNDRPNIKCPKGGLAA 985
Query: 565 YTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ-------- 616
Y+ SV+L +G V AS F YH PL DY ++RAARE ++ ++ L+
Sbjct: 986 YSTSVNLTS--DGQVLASRFMAYHKPLKNSQDYTEALRAARELAANITADLRKVPGTDPA 1043
Query: 617 MEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVV-CLITTCSFWSSAIILLVLTMIV 675
E+FPY++ +++EQYL I L L++ + F V CL+ S + LL + MI+
Sbjct: 1044 FEVFPYTITNVFYEQYLTILPEGLFMLSLCLVPTFAVSCLLLGLDLRSGLLNLLSIVMIL 1103
Query: 676 VDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDK-NQRMKEALGTMG 734
VD +G MA+ I NAVS++NLV AVG++VEF HIT +F++S+ +R KEA +MG
Sbjct: 1104 VDTVGFMALWGISYNAVSLINLVSAVGMSVEFVSHITRSFAISTKPTWLERAKEATISMG 1163
Query: 735 ASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQM 767
++VF+G+ +T L G++VL ++ ++ +++F++
Sbjct: 1164 SAVFAGVAMTNLPGILVLGLAKAQLIQIFFFRL 1196
Score = 430 (156.4 bits), Expect = 4.1e-103, Sum P(3) = 4.1e-103
Identities = 121/382 (31%), Positives = 183/382 (47%)
Query: 15 DCATQSVLQYFKMD------PKNFDDFGGV------EHVKYC------FQHYTSTE-SCM 55
DC S+LQYF+ + N G +H YC F+ T+ SCM
Sbjct: 484 DCCINSLLQYFQNNRTLLLLTANQTLMGQTSQVDWKDHFLYCANAPLTFKDGTALALSCM 543
Query: 56 SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 115
+ + P+ P A+GG+ G +YSEA A ++T+ +NN + +A WE+AF++ +
Sbjct: 544 ADYGAPVFPFLAIGGYKGKDYSEAEALIMTFSLNNYPAGDPR-LAQAKLWEEAFLEEMRA 602
Query: 116 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 175
M +T F +E S+E+E+ R + D SY+V+F YISL LG S
Sbjct: 603 FQRRMAGMFQVT--FMAERSLEDEINRTTAEDLPIFATSYIVIFLYISLALGSYSSWSRV 660
Query: 176 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 235
+ FFS +G++S+L+I++V+PFLVL+VG DN+ I V
Sbjct: 661 MVDSKATLGLGGVAVVLGAVMAAMGFFSYLGIRSSLVILQVVPFLVLSVGADNIFIFVLE 720
Query: 236 VKR--QQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXX 293
+R ++ P E I AL V PS+ L SLSE + F +G+ PMPA R F++
Sbjct: 721 YQRLPRRPGEPREVHIGRALGRVAPSMLLCSLSEAICFFLGALTPMPAVRTFALTSGLAV 780
Query: 294 XXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKE 353
Q++AFVAL+ D R E R+D C+K G G+ GLL + ++
Sbjct: 781 ILDFLLQMSAFVALLSLDSKRQEASRLDVCCCVKPQEL---PPPGQGE---GLLLGFFQK 834
Query: 354 VHATILSLWGVKIAVISLFVAF 375
+A L W + V+ V F
Sbjct: 835 AYAPFLLHWITRGVVVGAPVYF 856
Score = 61 (26.5 bits), Expect = 4.1e-103, Sum P(3) = 4.1e-103
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 2 ISLTDICMKPLGQD------CATQSVLQYFK 26
ISL DIC PL D C S+LQYF+
Sbjct: 465 ISLQDICYAPLNPDNTSLYDCCINSLLQYFQ 495
Score = 44 (20.5 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 210 TLIIMEVIPFLVLAVGV 226
T++++ VIP + LA G+
Sbjct: 354 TILVLSVIPVVALAAGL 370
>UNIPROTKB|Q8MKD8 [details] [associations]
symbol:Q8MKD8 "Niemann-Pick C1" species:9685 "Felis catus"
[GO:0005635 "nuclear envelope" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0007041 "lysosomal transport"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005635
GO:GO:0048471 GO:GO:0005887 GO:GO:0008206 GO:GO:0042632
GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 HOVERGEN:HBG003913
TIGRFAMs:TIGR00917 EMBL:AF503634 ProteinModelPortal:Q8MKD8
STRING:Q8MKD8 Uniprot:Q8MKD8
Length = 1276
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 264/792 (33%), Positives = 404/792 (51%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAF 58
++L DIC+ PL ++C SVL YF+ D G + Y H T C+ A
Sbjct: 462 VTLQDICVAPLSPYNKNCTILSVLNYFQNSHSMLDHEIGDDFFVYADYH-THLLYCVRAP 520
Query: 59 KGPLDPST----ALGGFSGNNYSE-ASAFVVTYPVNNAVDRE-----GNETKKAVAWEKA 108
D S LG F G + NNA N +KA
Sbjct: 521 ASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTERLQKA 580
Query: 109 FVQLAKDELLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLT 165
V + E + V++ NLT++F++E SIE+EL RES D T++ISY +MF YIS+
Sbjct: 581 HVW--EKEFINFVKNYKNPNLTISFTTERSIEDELNRESNGDIFTVIISYAIMFLYISIA 638
Query: 166 LGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVG 225
LG S + FS +G+ TLI++EVIPFLVLAVG
Sbjct: 639 LGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYVGIPLTLIVIEVIPFLVLAVG 698
Query: 226 VDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVF 285
VDN+ ILV +R + L ET + L V + + + AV F+ A
Sbjct: 699 VDNIFILVQTYQRDE-RLHGET-LDQQLGRVLGEVAPSMFLSSFSEAVAFFLG--ALSKM 754
Query: 286 SMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG-QRKP 344
I + + F L D + L + S+ G Q
Sbjct: 755 PAVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNRLDVLCCVRGSEDGTSVQASE 814
Query: 345 GLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQG 404
L R K ++ +L ++ VI++FV S+A+ ++E GL+Q + +P DSY+
Sbjct: 815 SCLFRLFKHSYSPLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMD 874
Query: 405 YFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSS 463
YF ++ ++L GPP+YFV++ ++Y+S Q N +C C+++SL+ +I A+ + +
Sbjct: 875 YFKSL-KYLHAGPPVYFVLEEGHDYTSLKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDSYT 932
Query: 464 YIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCT 523
I +SW+DD+ W+ P++ CCR + + + V C
Sbjct: 933 RIGFAPSSWIDDYFDWVKPQS-SCCRVYNS---------------TDRFCNASVVDPACI 976
Query: 524 TCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASS 583
C + K RP F LP FL+ P+ C KGGH AY+++V++ G + G V A+
Sbjct: 977 RCRPLTQEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTG-VGATY 1035
Query: 584 FRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRT 638
F TYHT L D+ ++MR A +S ++ ++ +E +FPYSVFY+++EQYL I
Sbjct: 1036 FMTYHTVLQTSADFTDAMRKANLIASNITKTMGLEGSNYRVFPYSVFYVFYEQYLTIIDD 1095
Query: 639 ALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNL 697
+ NL++++GA+F+V +I C WS+ I+ + + MI+V++ GVM + I LNAVS+VNL
Sbjct: 1096 TIFNLSVSLGAIFLVTVILLGCDLWSAVIMCITIAMILVNMFGVMWLWGISLNAVSLVNL 1155
Query: 698 VMAVGIAVEFCVHITHAFSVS-SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSR 756
VM+ GI+VEFC HIT AF+VS G + QR +EAL MG+SVFSGITLTK G++VL F++
Sbjct: 1156 VMSCGISVEFCSHITRAFTVSMKGSRAQRAEEALAHMGSSVFSGITLTKFGGIVVLAFAK 1215
Query: 757 TEVFVVYYFQMY 768
+++F ++YF+MY
Sbjct: 1216 SQIFQIFYFRMY 1227
>UNIPROTKB|Q9N0Q0 [details] [associations]
symbol:NPC1 "Niemann-Pick type C1 disease protein"
species:9685 "Felis catus" [GO:0005635 "nuclear envelope"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0007041
"lysosomal transport" evidence=ISS] [GO:0008206 "bile acid
metabolic process" evidence=ISS] [GO:0042632 "cholesterol
homeostasis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005635 GO:GO:0048471 GO:GO:0005887 GO:GO:0008206
GO:GO:0042632 GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 CTD:4864
HOVERGEN:HBG003913 TIGRFAMs:TIGR00917 EMBL:AF258783
RefSeq:NP_001009829.2 ProteinModelPortal:Q9N0Q0 STRING:Q9N0Q0
GeneID:493693 KEGG:fca:493693 Uniprot:Q9N0Q0
Length = 1276
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 264/792 (33%), Positives = 404/792 (51%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAF 58
++L DIC+ PL ++C SVL YF+ D G + Y H T C+ A
Sbjct: 462 VTLQDICVAPLSPYNKNCTILSVLNYFQNSHSMLDHEIGDDFFVYADYH-THLLYCVRAP 520
Query: 59 KGPLDPST----ALGGFSGNNYSE-ASAFVVTYPVNNAVDRE-----GNETKKAVAWEKA 108
D S LG F G + NNA N +KA
Sbjct: 521 ASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTERLQKA 580
Query: 109 FVQLAKDELLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLT 165
V + E + V++ NLT++F++E SIE+EL RES D T++ISY +MF YIS+
Sbjct: 581 HVW--EKEFINFVKNYKNPNLTISFTTERSIEDELNRESNGDIFTVIISYAIMFLYISIA 638
Query: 166 LGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVG 225
LG S + FS +G+ TLI++EVIPFLVLAVG
Sbjct: 639 LGHIKSCSRLLVDSKISLGIAGILIVLSSKACSLGIFSYVGIPLTLIVIEVIPFLVLAVG 698
Query: 226 VDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVF 285
VDN+ ILV +R + L ET + L V + + + AV F+ A
Sbjct: 699 VDNIFILVQTYQRDE-RLHGET-LDQQLGRVLGEVAPSMFLSSFSEAVAFFLG--ALSKM 754
Query: 286 SMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG-QRKP 344
I + + F L D + L + S+ G Q
Sbjct: 755 PAVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNRLDVLCCVRGSEDGTSVQASE 814
Query: 345 GLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQG 404
L R K ++ +L ++ VI++FV S+A+ ++E GL+Q + +P DSY+
Sbjct: 815 SCLFRLFKHSYSPLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMD 874
Query: 405 YFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSS 463
YF ++ ++L GPP+YFV++ ++Y+S Q N +C C+++SL+ +I A+ + +
Sbjct: 875 YFKSL-KYLHAGPPVYFVLEEGHDYTSLKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDSYT 932
Query: 464 YIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCT 523
I +SW+DD+ W+ P++ CCR + + + V C
Sbjct: 933 RIGFAPSSWIDDYFDWVKPQS-SCCRVYNS---------------TDRFCNASVVDPACI 976
Query: 524 TCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASS 583
C + K RP F LP FL+ P+ C KGGH AY+++V++ G + G V A+
Sbjct: 977 RCRPLTQEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTG-VGATY 1035
Query: 584 FRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRT 638
F TYHT L D+ ++MR A +S ++ ++ +E +FPYSVFY+++EQYL I
Sbjct: 1036 FMTYHTVLQTSADFTDAMRKANLIASNITKTMGLEGSNYRVFPYSVFYVFYEQYLTIIDD 1095
Query: 639 ALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNL 697
+ NL++++GA+F+V +I C WS+ I+ + + MI+V++ GVM + I LNAVS+VNL
Sbjct: 1096 TIFNLSVSLGAIFLVTVILLGCDLWSAVIMCITIAMILVNMFGVMWLWGISLNAVSLVNL 1155
Query: 698 VMAVGIAVEFCVHITHAFSVS-SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSR 756
VM+ GI+VEFC HIT AF+VS G + QR +EAL MG+SVFSGITLTK G++VL F++
Sbjct: 1156 VMSCGISVEFCSHITRAFTVSMKGSRAQRAEEALAHMGSSVFSGITLTKFGGIVVLAFAK 1215
Query: 757 TEVFVVYYFQMY 768
+++F ++YF+MY
Sbjct: 1216 SQIFQIFYFRMY 1227
>UNIPROTKB|Q8MI49 [details] [associations]
symbol:Q8MI49 "Mutant Niemann-Pick C1" species:9685 "Felis
catus" [GO:0005635 "nuclear envelope" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0007041 "lysosomal transport"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005635
GO:GO:0048471 GO:GO:0005887 GO:GO:0008206 GO:GO:0042632
GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 eggNOG:NOG149152
HOVERGEN:HBG003913 TIGRFAMs:TIGR00917 EMBL:AF503633
ProteinModelPortal:Q8MI49 STRING:Q8MI49 Uniprot:Q8MI49
Length = 1276
Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
Identities = 263/792 (33%), Positives = 403/792 (50%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAF 58
++L DIC+ PL ++C SVL YF+ D G + Y H T C+ A
Sbjct: 462 VTLQDICVAPLSPYNKNCTILSVLNYFQNSHSMLDHEIGDDFFVYADYH-THLLYCVRAP 520
Query: 59 KGPLDPST----ALGGFSGNNYSE-ASAFVVTYPVNNAVDRE-----GNETKKAVAWEKA 108
D S LG F G + NNA N +KA
Sbjct: 521 ASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTERLQKA 580
Query: 109 FVQLAKDELLPMVQS---KNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLT 165
V + E + V++ NLT++F++E SIE+EL RES D T++ISY +MF YIS+
Sbjct: 581 HVW--EKEFINFVKNYKNPNLTISFTTERSIEDELNRESNGDIFTVIISYAIMFLYISIA 638
Query: 166 LGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVG 225
LG S + FS +G+ TLI++EVIPFLVLAVG
Sbjct: 639 LGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYVGIPLTLIVIEVIPFLVLAVG 698
Query: 226 VDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVF 285
VDN+ ILV +R + L ET + L V + + + AV F+ A
Sbjct: 699 VDNIFILVQTYQRDE-RLHGET-LDQQLGRVLGEVAPSMFLSSFSEAVAFFLG--ALSKM 754
Query: 286 SMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG-QRKP 344
I + + F L D + L + S+ G Q
Sbjct: 755 PAVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNRLDVLCCVRGSEDGTSVQASE 814
Query: 345 GLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQG 404
L R K ++ +L ++ VI++FV S+A+ ++E GL+Q + +P DSY+
Sbjct: 815 SCLFRLFKHSYSPLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMD 874
Query: 405 YFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSS 463
YF ++ ++L GPP+YFV++ ++Y+S Q N +C C+++SL+ +I A+ + +
Sbjct: 875 YFKSL-KYLHAGPPVYFVLEEGHDYTSLKGQ-NMVCGGMGCNNDSLVQQIFNAAQLDSYT 932
Query: 464 YIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCT 523
I +SW+DD+ W+ P++ CR + + + V C
Sbjct: 933 RIGFAPSSWIDDYFDWVKPQS-SSCRVYNS---------------TDRFCNASVVDPACI 976
Query: 524 TCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASS 583
C + K RP F LP FL+ P+ C KGGH AY+++V++ G + G V A+
Sbjct: 977 RCRPLTQEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTG-VGATY 1035
Query: 584 FRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRT 638
F TYHT L D+ ++MR A +S ++ ++ +E +FPYSVFY+++EQYL I
Sbjct: 1036 FMTYHTVLQTSADFTDAMRKANLIASNITKTMGLEGSNYRVFPYSVFYVFYEQYLTIIDD 1095
Query: 639 ALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNL 697
+ NL++++GA+F+V +I C WS+ I+ + + MI+V++ GVM + I LNAVS+VNL
Sbjct: 1096 TIFNLSVSLGAIFLVTVILLGCDLWSAVIMCITIAMILVNMFGVMWLWGISLNAVSLVNL 1155
Query: 698 VMAVGIAVEFCVHITHAFSVS-SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSR 756
VM+ GI+VEFC HIT AF+VS G + QR +EAL MG+SVFSGITLTK G++VL F++
Sbjct: 1156 VMSCGISVEFCSHITRAFTVSMKGSRAQRAEEALAHMGSSVFSGITLTKFGGIVVLAFAK 1215
Query: 757 TEVFVVYYFQMY 768
+++F ++YF+MY
Sbjct: 1216 SQIFQIFYFRMY 1227
>UNIPROTKB|F1PB50 [details] [associations]
symbol:NPC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071404 "cellular response to low-density
lipoprotein particle stimulus" evidence=IEA] [GO:0071383 "cellular
response to steroid hormone stimulus" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0033344 "cholesterol efflux" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0016242 "negative
regulation of macroautophagy" evidence=IEA] [GO:0015485
"cholesterol binding" evidence=IEA] [GO:0007628 "adult walking
behavior" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006486 "protein
glycosylation" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0005783 GO:GO:0005794 GO:GO:0005635 GO:GO:0048471
GO:GO:0005887 GO:GO:0042493 GO:GO:0005768 GO:GO:0006914
GO:GO:0006897 GO:GO:0005764 GO:GO:0045121 GO:GO:0033344
GO:GO:0031982 GO:GO:0007628 GO:GO:0008158 GO:GO:0071383
GO:GO:0016242 GO:GO:0071404 GeneTree:ENSGT00680000099777
OMA:DGYDLVQ TIGRFAMs:TIGR00917 EMBL:AAEX03005455
Ensembl:ENSCAFT00000028892 Uniprot:F1PB50
Length = 1277
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 234/657 (35%), Positives = 359/657 (54%)
Query: 122 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 181
++ NLT++F++E SIE+EL RES D T++ISY VMF YIS+ LG S F +
Sbjct: 596 ENPNLTISFTTERSIEDELNRESNGDVFTVLISYAVMFLYISIALGHIKSCSRFLVDSKI 655
Query: 182 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL 241
FS G+ TLI++EVIPFLVLAVGVDN+ ILV +R +
Sbjct: 656 SLGIAGILIVLSSVMCSLGIFSYFGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDE- 714
Query: 242 ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQI 301
L ET + L V + + + AV F+ A I
Sbjct: 715 RLQGET-LEQQLGRVLGEVAPSMFLSSFSEAVAFFLG--ALSQMPAVHTFSLFAGMAVLI 771
Query: 302 TAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG-QRKPGLLARYMKEVHAT-IL 359
+ + F L D + L + S+ G G Q L R+ K ++ +L
Sbjct: 772 DFLLQITCFVSLLGLDLKRQEKNRLDVLCCLTGSEGGTGIQASESCLFRFFKNSYSPFLL 831
Query: 360 SLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 419
W ++ VI++FV SIA+ ++E GL+Q + +P DSY+ YF ++ ++L GPP+
Sbjct: 832 KDW-MRPIVIAVFVGILSFSIAVLNKVEIGLDQSLSMPDDSYMMDYFKSL-KYLHAGPPV 889
Query: 420 YFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLV 478
YFV++ ++Y+S Q N +C C+++SL+ +I A+ + + I +SW+DD+
Sbjct: 890 YFVLEEGHDYTSLEGQ-NMVCGGMGCNNDSLVQQIFSAAQLDNYTRIGFAPSSWIDDYFD 948
Query: 479 WISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPST 538
W+ P++ CCR + + V C C + K RP
Sbjct: 949 WVKPQS-SCCRVYNSTDQFCNASV---------------VDPACVRCRPLTQEGKRRPQG 992
Query: 539 IQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYV 598
F LP FL+ P+ C KGGH AY ++V+L G + V A+ F TYHT L D+
Sbjct: 993 EDFMRFLPMFLSDNPNPKCGKGGHAAYGSAVNLVGNDTS-VGATYFMTYHTVLQTSADFT 1051
Query: 599 NSMRAAREFSSRVSDSLQME-----IFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVV 653
++MR A +S ++ ++ ++ +FPYSVFY+++EQYL I + NL++++GA+F+V
Sbjct: 1052 DAMRKAILIASNITKTMSLKGSHYRVFPYSVFYVFYEQYLTIIDDTIFNLSVSLGAIFLV 1111
Query: 654 CLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHIT 712
L+ C WS+ I+ + + MI+V++ GVM + I LNAVS+VNLVM+ GI+VEFC HIT
Sbjct: 1112 TLVLLGCELWSAVIMCVTIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHIT 1171
Query: 713 HAFSVSS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMY 768
AF+VS+ G + +R +EAL MG+SVFSGITLTK G++VL F+++++F V+YF+MY
Sbjct: 1172 RAFTVSAKGSRVERAEEALSHMGSSVFSGITLTKFGGIVVLAFAKSQIFQVFYFRMY 1228
Score = 767 (275.1 bits), Expect = 2.8e-75, P = 2.8e-75
Identities = 185/516 (35%), Positives = 284/516 (55%)
Query: 2 ISLTDICMKPLG---QDCATQSVLQYFK-----MDPKNFDDFGGVE----HVKYCFQ--- 46
++L DIC+ PL ++C SVL YF+ +D K DDF H+ YC +
Sbjct: 463 VTLQDICVAPLSPYNKNCTIMSVLNYFQNSHSMLDHKIGDDFYVYADYHTHLLYCVRAPA 522
Query: 47 --HYTST--ESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKA 102
+ TS + C+ F GP+ P LGG+ NY+ A+A V+T+PVNN + + + ++A
Sbjct: 523 SLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYN-DTEKLQRA 581
Query: 103 VAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYI 162
AWEK F+ K+ ++ NLT++F++E SIE+EL RES D T++ISY VMF YI
Sbjct: 582 QAWEKEFINFVKN-----YENPNLTISFTTERSIEDELNRESNGDVFTVLISYAVMFLYI 636
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
S+ LG S F + FS G+ TLI++EVIPFLVL
Sbjct: 637 SIALGHIKSCSRFLVDSKISLGIAGILIVLSSVMCSLGIFSYFGIPLTLIVIEVIPFLVL 696
Query: 223 AVGVDNMCILVHAVKR-QQLE-LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
AVGVDN+ ILV +R ++L+ LE ++ L EV PS+ L+S SE +AF +G+ MP
Sbjct: 697 AVGVDNIFILVQTYQRDERLQGETLEQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSQMP 756
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIG 340
A FS+ QIT FV+L+ D R E R+D + CL S+ G G
Sbjct: 757 AVHTFSLFAGMAVLIDFLLQITCFVSLLGLDLKRQEKNRLDVLCCL------TGSEGGTG 810
Query: 341 -QRKPGLLARYMKEVHAT-ILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 398
Q L R+ K ++ +L W ++ VI++FV SIA+ ++E GL+Q + +P
Sbjct: 811 IQASESCLFRFFKNSYSPFLLKDW-MRPIVIAVFVGILSFSIAVLNKVEIGLDQSLSMPD 869
Query: 399 DSYLQGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRAS 457
DSY+ YF ++ ++L GPP+YFV++ ++Y+S Q N +C C+++SL+ +I A+
Sbjct: 870 DSYMMDYFKSL-KYLHAGPPVYFVLEEGHDYTSLEGQ-NMVCGGMGCNNDSLVQQIFSAA 927
Query: 458 LIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTN 493
+ + I +SW+DD+ W+ P++ CCR + +
Sbjct: 928 QLDNYTRIGFAPSSWIDDYFDWVKPQS-SCCRVYNS 962
>UNIPROTKB|Q9UHC9 [details] [associations]
symbol:NPC1L1 "Niemann-Pick C1-like protein 1" species:9606
"Homo sapiens" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0017137 "Rab
GTPase binding" evidence=IPI] [GO:0031489 "myosin V binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006695 "cholesterol biosynthetic process" evidence=IMP]
[GO:0030299 "intestinal cholesterol absorption" evidence=IMP]
[GO:0042157 "lipoprotein metabolic process" evidence=IMP]
[GO:0030301 "cholesterol transport" evidence=IMP] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0006629 "lipid metabolic
process" evidence=TAS] [GO:0015918 "sterol transport" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0005886
GO:GO:0016324 GO:GO:0006695 GO:GO:0042632 GO:GO:0042157
GO:GO:0030299 GO:GO:0030659 EMBL:CH236960 EMBL:CH471128
DrugBank:DB00973 GO:GO:0008158 EMBL:AC004938 eggNOG:NOG149152
HOVERGEN:HBG003913 HOGENOM:HOG000036674 EMBL:AF192522 EMBL:AF192523
EMBL:AY515256 EMBL:AY437865 EMBL:FJ481111 EMBL:BC117178
IPI:IPI00002984 IPI:IPI00640209 IPI:IPI00641846
RefSeq:NP_001095118.1 RefSeq:NP_037521.2 UniGene:Hs.567486 PDB:3QNT
PDBsum:3QNT ProteinModelPortal:Q9UHC9 SMR:Q9UHC9 IntAct:Q9UHC9
STRING:Q9UHC9 TCDB:2.A.6.6.6 PhosphoSite:Q9UHC9 DMDM:73921245
PRIDE:Q9UHC9 Ensembl:ENST00000289547 Ensembl:ENST00000381160
Ensembl:ENST00000423141 GeneID:29881 KEGG:hsa:29881 UCSC:uc003tld.3
CTD:29881 GeneCards:GC07M044552 H-InvDB:HIX0201184 HGNC:HGNC:7898
HPA:HPA018105 MIM:608010 neXtProt:NX_Q9UHC9 PharmGKB:PA31699
InParanoid:Q9UHC9 KO:K14461 OMA:FMAERSL OrthoDB:EOG490787
PhylomeDB:Q9UHC9 BindingDB:Q9UHC9 ChEMBL:CHEMBL2027
GenomeRNAi:29881 NextBio:52405 ArrayExpress:Q9UHC9 Bgee:Q9UHC9
CleanEx:HS_NPC1L1 Genevestigator:Q9UHC9 GermOnline:ENSG00000015520
Uniprot:Q9UHC9
Length = 1359
Score = 781 (280.0 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 224/721 (31%), Positives = 352/721 (48%)
Query: 15 DCATQSVLQYFKMD------PKNFDDFGGV------EHVKYC------FQHYTSTE-SCM 55
DC S+LQYF+ + N G +H YC F+ T+ SCM
Sbjct: 484 DCCINSLLQYFQNNRTLLLLTANQTLMGQTSQVDWKDHFLYCANAPLTFKDGTALALSCM 543
Query: 56 SAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKD 115
+ + P+ P A+GG+ G +YSEA A ++T+ +NN + +A WE+AF++ +
Sbjct: 544 ADYGAPVFPFLAIGGYKGKDYSEAEALIMTFSLNNYPAGDPR-LAQAKLWEEAFLEEMRA 602
Query: 116 ELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF 175
M +T F +E S+E+E+ R + D SY+V+F YISL LG S
Sbjct: 603 FQRRMAGMFQVT--FMAERSLEDEINRTTAEDLPIFATSYIVIFLYISLALGSYSSWSRV 660
Query: 176 YIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHA 235
+ FFS +G++S+L+I++V+PFLVL+VG DN+ I V
Sbjct: 661 MVDSKATLGLGGVAVVLGAVMAAMGFFSYLGIRSSLVILQVVPFLVLSVGADNIFIFVLE 720
Query: 236 VKR--QQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXX 293
+R ++ P E I AL V PS+ L SLSE + F +G+ PMPA R F++
Sbjct: 721 YQRLPRRPGEPREVHIGRALGRVAPSMLLCSLSEAICFFLGALTPMPAVRTFALTSGLAV 780
Query: 294 XXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKE 353
Q++AFVAL+ D R E R+D C+K G G+ GLL + ++
Sbjct: 781 ILDFLLQMSAFVALLSLDSKRQEASRLDVCCCVKPQEL---PPPGQGE---GLLLGFFQK 834
Query: 354 VHATILSLWGVKIAVISLFVA-FTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEH 412
+A L W + V+ LF+A F ++ ++C I GL+Q++ LP+DSYL YF ++ +
Sbjct: 835 AYAPFLLHWITRGVVLLLFLALFGVSLYSMC-HISVGLDQELALPKDSYLLDYFLFLNRY 893
Query: 413 LRIGPPLYFVVK-NYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAAS 471
+G P+YFV YN+SSE+ N +CS + C++ S +I A+ P+ SY+A PA+S
Sbjct: 894 FEVGAPVYFVTTLGYNFSSEAGM-NAICSSAGCNNFSFTQKIQYATEFPEQSYLAIPASS 952
Query: 472 WLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDL 531
W+DDF+ W++P + CCR + +G K+C + S
Sbjct: 953 WVDDFIDWLTPSS--CCRLYISGP--------NKDKFCPSTVNSLNCLKNCMSITMGSV- 1001
Query: 532 LKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKG--------------YE-N 576
RPS QF + LPWFLN P+ C KGG AY+ SV+L E +
Sbjct: 1002 ---RPSVEQFHKYLPWFLNDRPNIKCPKGGLAAYSTSVNLTSDGQVLDTVAILSPRLEYS 1058
Query: 577 GIVQA----------SSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFY 626
G + A S F YH PL DY ++RAARE ++ ++ L+ F
Sbjct: 1059 GTISAHCNLYLLDSTSRFMAYHKPLKNSQDYTEALRAARELAANITADLRKVPGTDPAFE 1118
Query: 627 MYFEQYLDIWRTALINLAIAIGAVFV-VCLITTCSFWSSAIIL-LVLTMIVVDLMGVMAI 684
++ +++ + + + G + +CL+ T F S ++L L L +++L+ ++ I
Sbjct: 1119 VFPYTITNVFYEQYLTI-LPEGLFMLSLCLVPT--FAVSCLLLGLDLRSGLLNLLSIVMI 1175
Query: 685 L 685
L
Sbjct: 1176 L 1176
Score = 346 (126.9 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 73/196 (37%), Positives = 121/196 (61%)
Query: 582 SSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQ--------MEIFPYSVFYMYFEQYL 633
S F YH PL DY ++RAARE ++ ++ L+ E+FPY++ +++EQYL
Sbjct: 1074 SRFMAYHKPLKNSQDYTEALRAARELAANITADLRKVPGTDPAFEVFPYTITNVFYEQYL 1133
Query: 634 DIWRTALINLAIAIGAVFVV-CLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAV 692
I L L++ + F V CL+ S + LL + MI+VD +G MA+ I NAV
Sbjct: 1134 TILPEGLFMLSLCLVPTFAVSCLLLGLDLRSGLLNLLSIVMILVDTVGFMALWGISYNAV 1193
Query: 693 SVVNLVMAVGIAVEFCVHITHAFSVSSGDK-NQRMKEALGTMGASVFSGITLTKLVGVIV 751
S++NLV AVG++VEF HIT +F++S+ +R KEA +MG++VF+G+ +T L G++V
Sbjct: 1194 SLINLVSAVGMSVEFVSHITRSFAISTKPTWLERAKEATISMGSAVFAGVAMTNLPGILV 1253
Query: 752 LCFSRTEVFVVYYFQM 767
L ++ ++ +++F++
Sbjct: 1254 LGLAKAQLIQIFFFRL 1269
Score = 61 (26.5 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 2 ISLTDICMKPLGQD------CATQSVLQYFK 26
ISL DIC PL D C S+LQYF+
Sbjct: 465 ISLQDICYAPLNPDNTSLYDCCINSLLQYFQ 495
Score = 44 (20.5 bits), Expect = 6.9e-27, Sum P(2) = 6.9e-27
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 210 TLIIMEVIPFLVLAVGV 226
T++++ VIP + LA G+
Sbjct: 354 TILVLSVIPVVALAAGL 370
>SGD|S000005927 [details] [associations]
symbol:NCR1 "Vacuolar membrane protein" species:4932
"Saccharomyces cerevisiae" [GO:0006665 "sphingolipid metabolic
process" evidence=IEA;IMP] [GO:0016021 "integral to membrane"
evidence=ISM;IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0006869 "lipid transport" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0046624 "sphingolipid transporter activity"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 SGD:S000005927 GO:GO:0016021 GO:GO:0000329
EMBL:Z71255 EMBL:BK006949 EMBL:Z48483 EMBL:U33335 GO:GO:0006665
GO:GO:0008158 GO:GO:0046624 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 KO:K12385 OMA:DGYDLVQ
HOGENOM:HOG000036674 PIR:S52525 RefSeq:NP_015319.1
ProteinModelPortal:Q12200 SMR:Q12200 IntAct:Q12200
MINT:MINT-1552235 STRING:Q12200 TCDB:2.A.6.6.3 PaxDb:Q12200
PeptideAtlas:Q12200 EnsemblFungi:YPL006W GeneID:856101
KEGG:sce:YPL006W CYGD:YPL006w OrthoDB:EOG48D43G NextBio:981149
Genevestigator:Q12200 GermOnline:YPL006W Uniprot:Q12200
Length = 1170
Score = 426 (155.0 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 104/281 (37%), Positives = 152/281 (54%)
Query: 522 CTTCFHHSDL---LKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI 578
C TCF + P F E L ++NA PS C GG Y+ ++ Y
Sbjct: 888 CETCFQQGSWNYNMSGFPEGKDFMEYLSIWINA-PSDPCPLGGRAPYSTALV---YNETS 943
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSL-QMEIFPYSVFYMYFEQYLDIWR 637
V AS FRT H PL Q D++ A R+S S ++++F YS FY++F QY +
Sbjct: 944 VSASVFRTAHHPLRSQKDFIQ----AYSDGVRISSSFPELDMFAYSPFYIFFVQYQTLGP 999
Query: 638 TALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNL 697
L + AI +F + + + SS ++ LV+TMI+VD+ +MA+L I LNAVS+VNL
Sbjct: 1000 LTLKLIGSAIILIFFISSVFLQNIRSSFLLALVVTMIIVDIGALMALLGISLNAVSLVNL 1059
Query: 698 VMAVGIAVEFCVHITHAFSV----SSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLC 753
++ VG+ VEFCVHI +F+V + D N R+ +L T+G SV GITLTK +GV VL
Sbjct: 1060 IICVGLGVEFCVHIVRSFTVVPSETKKDANSRVLYSLNTIGESVIKGITLTKFIGVCVLA 1119
Query: 754 FSRTEVFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGPPS 794
F+++++F V+YF+M+ S+FG S
Sbjct: 1120 FAQSKIFDVFYFRMWFTLIIVAALHALLFLPALLSLFGGES 1160
Score = 251 (93.4 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 65/227 (28%), Positives = 113/227 (49%)
Query: 97 NETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYL 156
N T+ A WE+ + D +P + L ++F++E S+E+EL + D T+ ISYL
Sbjct: 513 NHTQSANRWEERLEEYLLDLKVP----EGLRISFNTEISLEKELNNNN--DISTVAISYL 566
Query: 157 VMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEV 216
+MF Y + L + + F + G+KSTLII EV
Sbjct: 567 MMFLYATWALRRKDGKTRLLLGISGLLIVLASIVCAAG------FLTLFGLKSTLIIAEV 620
Query: 217 IPFLVLAVGVDNMCILVHAVKR---QQLELPLETRISNALVEVGPSITLASLSEVLAFAV 273
IPFL+LA+G+DN+ ++ H R Q+ E ++ +I +A+ + PSI ++ L + F +
Sbjct: 621 IPFLILAIGIDNIFLITHEYDRNCEQKPEYSIDQKIISAIGRMSPSILMSLLCQTGCFLI 680
Query: 274 GSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRV 320
+F+ MPA F++ Q+TA+V+++ R+ K++
Sbjct: 681 AAFVTMPAVHNFAIYSTVSVIFNGVLQLTAYVSILSLYEKRSNYKQI 727
Score = 220 (82.5 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 43/126 (34%), Positives = 73/126 (57%)
Query: 365 KIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVK 424
K +I +F A+ S+ I+ GL+Q + +P+DSYL YF ++ L +GPP+Y VVK
Sbjct: 749 KRLIIIIFSAWFFTSLVFLPEIQFGLDQTLAVPQDSYLVDYFKDVYSFLNVGPPVYMVVK 808
Query: 425 NYNYSSESRQTNQLCS-ISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPE 483
N + + Q ++C + C+ +SL N + + S I +P A+WLDD+ ++++P+
Sbjct: 809 NLDLTKRQNQ-QKICGKFTTCERDSLANVLEQER---HRSTITEPLANWLDDYFMFLNPQ 864
Query: 484 AFGCCR 489
CCR
Sbjct: 865 NDQCCR 870
Score = 143 (55.4 bits), Expect = 6.7e-65, Sum P(3) = 6.7e-65
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 2 ISLTDICMKPLGQD-CATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKG 60
I D+C +P C +S QYF+ N D + ++ C + + C+ F+
Sbjct: 432 IGYQDLCFRPTEDSTCVIESFTQYFQGALPNKDSWK--RELQECGKFPVN---CLPTFQQ 486
Query: 61 PLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPM 120
PL + FS ++ A AFVVT + N T+ A WE+ + D +P
Sbjct: 487 PLKTNLL---FSDDDILNAHAFVVTLLLTN-------HTQSANRWEERLEEYLLDLKVP- 535
Query: 121 VQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTL 166
+ L ++F++E S+E+EL + D T+ ISYL+MF Y + L
Sbjct: 536 ---EGLRISFNTEISLEKELNNNN--DISTVAISYLMMFLYATWAL 576
>WB|WBGene00003561 [details] [associations]
symbol:ncr-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0042632 "cholesterol homeostasis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0046662 "regulation of oviposition" evidence=IMP]
[GO:0040024 "dauer larval development" evidence=IGI] [GO:0005770
"late endosome" evidence=ISS] [GO:0005764 "lysosome" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030301
"cholesterol transport" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040010 EMBL:FO081068 GO:GO:0005764
GO:GO:0042632 GO:GO:0005770 GO:GO:0046662 GO:GO:0040024
GO:GO:0030301 GO:GO:0008158 PIR:T15961 RefSeq:NP_508771.1
ProteinModelPortal:Q19127 SMR:Q19127 STRING:Q19127 PaxDb:Q19127
EnsemblMetazoa:F02E8.6 GeneID:180719 KEGG:cel:CELE_F02E8.6
UCSC:F02E8.6 CTD:180719 WormBase:F02E8.6 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 HOGENOM:HOG000020287 InParanoid:Q19127
KO:K12385 OMA:DGYDLVQ NextBio:910614 Uniprot:Q19127
Length = 1383
Score = 558 (201.5 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
Identities = 165/736 (22%), Positives = 315/736 (42%)
Query: 53 SCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQL 112
SCM + GP P+ G S N+ A++ ++T V R E +KA WEK F++
Sbjct: 540 SCMGTYGGPSAPNMVFGKNS-TNHQAANSIMMTILVTQ---RTEPEIQKAELWEKEFLKF 595
Query: 113 AKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGD---- 168
K+ +S + +F +E SI +E++ ++ + +T+VI+ + Y++ +LG
Sbjct: 596 CKEY---REKSPKVIFSFMAERSITDEIENDAKDEIVTVVIALAFLIGYVTFSLGRYFVC 652
Query: 169 TPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDN 228
L S + FS G+ + V F+V +GV
Sbjct: 653 ENQLWSILVHSRICLGMLSVIINLLSSFCSWGIFSMFGIHPVKNALVVQFFVVTLLGVCR 712
Query: 229 MCILVHAVKRQQLELPLETR------ISNALVEVGPSITLASLSEVLAFAVGSFIPMPAC 282
++V +Q++ +P + + + P++ +SL +F +G F +PA
Sbjct: 713 TFMVVKYYAQQRVSMPYMSPDQCPEIVGMVMAGTMPAMFSSSLGCAFSFFIGGFTDLPAI 772
Query: 283 RVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQR 342
R F + T F+AL V+D R + + + ++ G +
Sbjct: 773 RTFCLYAGLAVLIDVVLHCTIFLALFVWDTQRELNGKPEFFFPYQIKDLLGAYLIGRQRA 832
Query: 343 KPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYL 402
+ ++ A L +I +F+A + ++ L ++I G +Q + SY+
Sbjct: 833 TDTFMTQFFHFQVAPFLMHRMTRIITGIIFIASFITTVILSSKISVGFDQSMAFTEKSYI 892
Query: 403 QGYFNNISEHLRIGPPLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQ 461
+F + + +GPP++F V ++ Q N+ C+ C S N ++ A +
Sbjct: 893 STHFRYLDKFFDVGPPVFFTVDGELDWHRPDVQ-NKFCTFPGCSDTSFGNIMNYAVGHTE 951
Query: 462 SSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKD 521
+Y++ +W+D++L WIS ++ CC+ + + C D
Sbjct: 952 QTYLSGEMYNWIDNYLEWISRKS-PCCKVYVHDP---NTFCSTNRNKSALDDKACRTCMD 1007
Query: 522 ---CTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGI 578
+ S ++ RPS F L FL P++ C GG ++ +++ G
Sbjct: 1008 FDYVANSYPKSSIMYHRPSIEVFYRHLRHFLEDTPNSECVFGGRASFKDAISFTS--RGR 1065
Query: 579 VQASSFRTYHTPLN--RQIDYVNSMRAAREFSSRVSDSLQ--MEIFPYSVFYMYFEQYLD 634
+QAS F T+H L+ D++ +M AR S R+ S+ +F YS + ++EQY
Sbjct: 1066 IQASQFMTFHKKLSISNSSDFIKAMDTARMVSRRLERSIDDTAHVFAYSKIFPFYEQYST 1125
Query: 635 IWRTALINLAIAIGAVF-VVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVS 693
I L I + VF ++C+ +A ++ ++ M I I +NA+S
Sbjct: 1126 IMPILTTQLFITVVGVFGIICVTLGIDVKGAACAVICQVSNYFHIVAFMYIFNIPVNALS 1185
Query: 694 VVNLVMAVGIAVEFCVHITHAFSVSSGDK-NQRMKEALGTMGASVFSGITLTKLVGVIVL 752
NLVM+ GI +EF V++ ++ S + R + +G++G + SG +T + L
Sbjct: 1186 ATNLVMSSGILIEFSVNVLKGYACSLRQRAKDRAESTVGSIGPIILSGPVVTMAGSTMFL 1245
Query: 753 CFSRTEVFVVYYFQMY 768
+ ++ VY+F+++
Sbjct: 1246 SGAHLQIITVYFFKLF 1261
Score = 63 (27.2 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 2 ISLTDICMKPLGQ--DCATQSVLQYFKMDPKNFD 33
I+L D+C +P+G DC S YF+ + ++ D
Sbjct: 458 ITLDDVCYRPMGPGYDCLIMSPTNYFQGNKEHLD 491
>UNIPROTKB|J9PBB6 [details] [associations]
symbol:J9PBB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] InterPro:IPR003392
Pfam:PF02460 GO:GO:0016020 GO:GO:0008158
GeneTree:ENSGT00680000099777 Ensembl:ENSCAFT00000048348 OMA:WMYLQEI
Uniprot:J9PBB6
Length = 339
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 127/342 (37%), Positives = 193/342 (56%)
Query: 436 NQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGS 495
N +CS + CDS SL +I A+ P+ SY+A PA+SW+DDF+ W++P + CCR + G+
Sbjct: 2 NAVCSSAGCDSYSLTQKIQYATEFPEESYLAIPASSWVDDFIDWLTPSS--CCRLYAFGA 59
Query: 496 YXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSA 555
K+C F + RPS QF + LPWFL+ P+
Sbjct: 60 --------NKDKFCPSTVNSLACLKNCVN-FTLGPV---RPSVDQFHKYLPWFLSDPPNI 107
Query: 556 SCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSL 615
C KGG AY SV L G +G V AS F YH PL DY ++R +R ++ ++ L
Sbjct: 108 KCPKGGLAAYNTSVHL-G-SDGQVLASRFMAYHKPLRNSEDYTEALRVSRALAANITAQL 165
Query: 616 QM--------EIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVC-LITTCSFWSSAI 666
+ E+FPY++ +++EQYL + L LAI + FVVC L+ S +
Sbjct: 166 RQVPGTDPAFEVFPYTITNVFYEQYLSVVPEGLFMLAICLLPTFVVCCLLLGMDLRSGLL 225
Query: 667 ILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKN-QR 725
L + MI+VD +G MA+ I NAVS++NLV AVGI+VEF HIT +F+VS+ +R
Sbjct: 226 NLFSIVMILVDTVGFMALWGISYNAVSLINLVTAVGISVEFVSHITRSFAVSTRPTRLER 285
Query: 726 MKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQM 767
KEA +MG++VF+G+ +T L G++VL ++ ++ +++F++
Sbjct: 286 AKEATISMGSAVFAGVAMTNLPGILVLGLAKAQLIQIFFFRL 327
>WB|WBGene00003562 [details] [associations]
symbol:ncr-2 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040025 "vulval development" evidence=IGI]
[GO:0040024 "dauer larval development" evidence=IGI] [GO:0042632
"cholesterol homeostasis" evidence=IGI] [GO:0030301 "cholesterol
transport" evidence=IGI] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0042632
GO:GO:0040024 GO:GO:0040025 GO:GO:0030301 GO:GO:0008158
EMBL:FO080289 GeneTree:ENSGT00680000099777 PIR:S44797
RefSeq:NP_498813.1 ProteinModelPortal:P34389 SMR:P34389
EnsemblMetazoa:F09G8.4 GeneID:176165 KEGG:cel:CELE_F09G8.4
UCSC:F09G8.4 CTD:176165 WormBase:F09G8.4 eggNOG:NOG254241
HOGENOM:HOG000113842 InParanoid:P34389 OMA:DQCCRFK NextBio:891402
Uniprot:P34389
Length = 1274
Score = 535 (193.4 bits), Expect = 3.0e-49, P = 3.0e-49
Identities = 196/774 (25%), Positives = 328/774 (42%)
Query: 27 MDPKNFDDFGGVEHVKYCFQH----YTSTE-SCMSAFKGPLDPSTALGGFSGNNYSEASA 81
+D + FDD EH+KYC ++ T +E SC F GP+DP GG S + A
Sbjct: 469 IDDEIFDDQHW-EHLKYCIRNPLTVSTYSEMSCFGEFSGPIDPILVFGG-SNESIKGAEM 526
Query: 82 FVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELK 141
+ + V G E + A+AWE AF+ + + + K+ F +E+S+ EE+
Sbjct: 527 YYTARTIMITVLIRGPEDQ-AIAWETAFLNM-----MSRYEMKHANFTFMTETSVAEEIH 580
Query: 142 RESTADAITIVISYLVMFAYISLTLGDT--PHLS--SFYIXXXXXXXXXXXXXXXXXXXX 197
D I VI+ + ++ LG P S S +
Sbjct: 581 TAVETDKIVSVIACAAVLIWVITMLGINHWPESSILSALVHHKLLISISAVMISVISVWC 640
Query: 198 XXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQ--LELP------LETRI 249
FS GV +T + V+ F++ +G++ + +++ + LP + RI
Sbjct: 641 SIGMFSLFGVHATDNAIVVLFFVITCLGINRIFVIIRTFQANGHCYGLPNISYREMNHRI 700
Query: 250 SNALVEVGPSITLASL-SEVLAFAVGSFIP-----MPACRVFSMXXXXXXXXXXXXQITA 303
SN + P + SL F G +P MPA VF+ +
Sbjct: 701 SNVMRRSIPIVLTNSLICSTCLFLAGGVLPYVSVSMPAVEVFARHAGLAILMDTAFYLLV 760
Query: 304 FVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRK-PGLLARYMKEVHATILSLW 362
+ L +D R + + P +LS+ +S + G L + I L
Sbjct: 761 MLPLFQYDARREMSGKCEIWPWYELSN---ESKINLCMEAVDGNLRSPVDWFKLAIAPLL 817
Query: 363 GVKIAVISLFVAFTLASI--ALCTR-IEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPL 419
KI I + F ++ I CT +E G Q + SYL +F N++E+L IGPPL
Sbjct: 818 LKKICRIWIATFFFVSLIIACYCTLCLEFGFNQVMAFSETSYLTKHFQNMNENLNIGPPL 877
Query: 420 YFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIP--QSSYIAKPAASWLDDFL 477
+FVV+ + + N+ C+++ CD NS+ N+I + + +Y+ WLD +L
Sbjct: 878 WFVVEGDVKWHDPKMQNKFCTLAGCDDNSMGNKIRSLAYAENYKGNYLHGDVNIWLDSYL 937
Query: 478 VWISPEAFGCCRKFTNGSYXXXXXXXXXXXXXXXXXXXAGVCKDCTTCFHHSDLLKDRPS 537
++ P CC+ +G C C++ S + +
Sbjct: 938 QFMHPRG-SCCKM--DGKQFCDPSNATH-------------CSSCSS----SSVASLTTT 977
Query: 538 TIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQ--I 595
+F L FL PS CA GG +++L NG +Q++ F T+ LN I
Sbjct: 978 EYEFYRNLHHFLETPPSIQCAHGGMALAKPAINLT--RNGKIQSAYFSTFFKKLNLSDSI 1035
Query: 596 DYVNSMRAAREFSSRVSDSLQM---EIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFV 652
++ R A+ + + L++ +++ YS F+ Y+EQYL + T + + + FV
Sbjct: 1036 QLYDAWRFAKYLADDIERELEIPGVKVYVYSTFFPYYEQYLTLSTTVYTLVVLVLFVAFV 1095
Query: 653 -VCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHI 711
+ L + S + + VL + LM M +L I +N VSV+N+ M++GIAVEF +
Sbjct: 1096 TISLFLRVNLAGSLVTVFVLLSSYLHLMEWMYLLGITVNVVSVINMAMSLGIAVEFFGQM 1155
Query: 712 THAFSVSSGDKNQ-RMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYY 764
H F S K + R AL + G++ SGI ++ L F+ + V + Y+
Sbjct: 1156 LHGFYNSKKPKREERAFAALVSNGSTTLSGIFPAIMITAGCLSFADSRVLITYF 1209
>ZFIN|ZDB-GENE-980526-196 [details] [associations]
symbol:ptch1 "patched 1" species:7955 "Danio rerio"
[GO:0016020 "membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0048635 "negative regulation of muscle organ
development" evidence=IGI] [GO:0010002 "cardioblast
differentiation" evidence=IGI] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IMP] [GO:0001957 "intramembranous
ossification" evidence=IMP] [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-980526-196 GO:GO:0016021 GO:GO:0010002 GO:GO:0001649
GO:GO:0001957 GO:GO:0008158 GO:GO:0045879 GO:GO:0048635
GO:GO:0060042 GeneTree:ENSGT00680000099777 KO:K06225 CTD:5727
TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:CR847548 EMBL:CR376747
EMBL:CR382329 EMBL:CT027671 IPI:IPI00994727 RefSeq:XP_001922161.3
UniGene:Dr.116176 UniGene:Dr.81263 Ensembl:ENSDART00000121923
GeneID:30189 KEGG:dre:30189 NextBio:20806655 ArrayExpress:F1QRE4
Bgee:F1QRE4 Uniprot:F1QRE4
Length = 1475
Score = 280 (103.6 bits), Expect = 4.1e-43, Sum P(3) = 4.1e-43
Identities = 67/231 (29%), Positives = 118/231 (51%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L +V ++ + R + S + +P ++++EQY+ +
Sbjct: 983 IEYAQFPFYLNGLRETPQFVEAIESVRAICNNFSRQ-GLPSYPNGYPFLFWEQYVGLRHW 1041
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+++++ + F+VC + + W++ II+LVL+++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1042 LLLSISVVLACTFLVCAVFLLNPWTAGIIVLVLSLMTVELFGMMGLIGIKLSAVPVVILI 1101
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VH+ AF + GD+N+R AL M A V G T L+GV++L S +
Sbjct: 1102 ASVGIGVEFTVHVALAFLTAIGDRNKRAVLALEHMFAPVLDGAFST-LLGVLMLAGSEFD 1160
Query: 759 VFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGPPSRCMLVERQEERPSVS 809
V Y+F + S FGP + Q P+ S
Sbjct: 1161 FIVRYFFAVLAILTVLGVLNGLVLLPVLLSYFGPYPEVSPADGQSRLPTPS 1211
Score = 247 (92.0 bits), Expect = 4.1e-43, Sum P(3) = 4.1e-43
Identities = 77/264 (29%), Positives = 113/264 (42%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE K A AW++ + + A + +P V S L F++ +++E+ LK S I I
Sbjct: 377 NEDKAAAILEAWQRKYSE-AVQQSVP-VNSSQKVLTFTT-TTLEDILKSFSDVSVIRIAS 433
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S +G+
Sbjct: 434 GYLLMLAYACLTM-----LRWDCAKSQGAVGLAGVLLVTLSVAAGLGLCSLLGISFNAAT 488
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 489 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 548
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVD---CI--PC- 325
+ + IP+PA R FS+ + F A++ D R ED+R D C PC
Sbjct: 549 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRFDIFCCFVSPCA 608
Query: 326 -----LKLSSSYADSDKGIGQRKP 344
L+ ++YADS + P
Sbjct: 609 NRVIQLEPQAAYADSSADSSRYSP 632
Score = 71 (30.1 bits), Expect = 4.1e-43, Sum P(3) = 4.1e-43
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 348 ARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFN 407
A + ++ +A L K+ VI LF+A S+ TR+ GLE ++PR++ G ++
Sbjct: 752 ASFAEKHYAPFLLQSTTKVVVIFLFLALLGVSLYGTTRVRDGLELTDIVPRET---GEYD 808
Query: 408 NISEHLRIGP--PLYFVVKNYNYSSESRQTNQL 438
I R +Y V + +Y+ Q +L
Sbjct: 809 FIRAQFRYFSFYNMYVVTQRADYAQIQPQLYEL 841
>UNIPROTKB|F1PNE0 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0008158
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:AAEX03000490 Ensembl:ENSCAFT00000001978 Uniprot:F1PNE0
Length = 1449
Score = 287 (106.1 bits), Expect = 5.5e-43, Sum P(3) = 5.5e-43
Identities = 66/214 (30%), Positives = 113/214 (52%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 966 IEYAQFPFYLNGLRDTSDFVEAIEKVRSICNNYT-SLGLSSYPNGYPFLFWEQYIGLRHW 1024
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+++++ + F+VC + + W++ II+ VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1025 LLLSVSVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAVPVVILI 1084
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VH+ AF + GDKN+R AL M A V G T L+GV++L S +
Sbjct: 1085 ASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVST-LLGVLMLAGSEFD 1143
Query: 759 VFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGP 792
V Y+F + S FGP
Sbjct: 1144 FIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 1177
Score = 249 (92.7 bits), Expect = 5.5e-43, Sum P(3) = 5.5e-43
Identities = 67/234 (28%), Positives = 102/234 (43%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE K A AW++ +V++ + P S L+F++ +++++ LK S I +
Sbjct: 386 NEDKAAAILEAWQRTYVEVVHQSVAP--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 442
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 443 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 497
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 498 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 557
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 558 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 611
Score = 60 (26.2 bits), Expect = 5.5e-43, Sum P(3) = 5.5e-43
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 730 LSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 783
>UNIPROTKB|F1NYG9 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0005113 "patched binding"
evidence=IEA] [GO:0005119 "smoothened binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] [GO:0008544 "epidermis
development" evidence=IEA] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IEA] [GO:0010157 "response to chlorate"
evidence=IEA] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0021997 "neural plate axis specification" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0035137 "hindlimb morphogenesis" evidence=IEA] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043616
"keratinocyte proliferation" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051782 "negative regulation of cell division"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IEA] [GO:0061053 "somite
development" evidence=IEA] [GO:0071397 "cellular response to
cholesterol" evidence=IEA] [GO:0072203 "cell proliferation involved
in metanephros development" evidence=IEA] [GO:0072661 "protein
targeting to plasma membrane" evidence=IEA] [GO:0097108 "hedgehog
family protein binding" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0007346 GO:GO:0005794 GO:GO:0048471
GO:GO:0043616 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0040015
GO:GO:0005901 GO:GO:0043433 GO:GO:0030496 GO:GO:0016485
GO:GO:0050680 GO:GO:0072661 GO:GO:0007224 GO:GO:0045668
GO:GO:0008158 GO:GO:0051782 GO:GO:0045879 GO:GO:0010157
GeneTree:ENSGT00680000099777 IPI:IPI00593923 TIGRFAMs:TIGR00918
OMA:APDRDYL EMBL:AADN02067838 EMBL:AADN02067839 EMBL:AADN02067840
EMBL:AADN02067841 EMBL:AADN02067842 EMBL:AADN02067843
Ensembl:ENSGALT00000020601 Uniprot:F1NYG9
Length = 1303
Score = 289 (106.8 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 67/214 (31%), Positives = 114/214 (53%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 829 IEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYT-SLGIASYPNGYPFLFWEQYIGLRHW 887
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+++++ + F+VC + + W++ II++VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 888 LLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSAVPVVILI 947
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VHI AF + GDKN+R AL M A V G T L+GV++L S +
Sbjct: 948 ASVGIGVEFTVHIALAFLTAIGDKNRRAVLALEHMFAPVLDGAVST-LLGVLMLAGSEFD 1006
Query: 759 VFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGP 792
V Y+F + S FGP
Sbjct: 1007 FIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 1040
Score = 241 (89.9 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 257 NEDKAAAILEAWQRMYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 313
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 314 GYLLMLAYACLTM-----LRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 368
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 369 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 428
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 429 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 482
Score = 63 (27.2 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PRD+
Sbjct: 600 LSTFAEKHYAPFLLKPKAKVVVIFLFLGLLGLSLYGTTRVRDGLDLTDIVPRDT 653
>MGI|MGI:105373 [details] [associations]
symbol:Ptch1 "patched homolog 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:0001841
"neural tube formation" evidence=IDA] [GO:0001843 "neural tube
closure" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0005113 "patched binding" evidence=IDA]
[GO:0005119 "smoothened binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=ISO;IDA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0005901
"caveola" evidence=ISO] [GO:0007165 "signal transduction"
evidence=IDA;TAS] [GO:0007224 "smoothened signaling pathway"
evidence=IGI;IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0008158 "hedgehog receptor activity" evidence=TAS] [GO:0008201
"heparin binding" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0008544 "epidermis development"
evidence=IMP] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IGI;IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI] [GO:0010157 "response to chlorate" evidence=IDA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=ISO] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0015485 "cholesterol binding" evidence=ISO;TAS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016485 "protein processing" evidence=IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IGI] [GO:0021532 "neural tube patterning" evidence=ISO]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IMP]
[GO:0021997 "neural plate axis specification" evidence=IMP]
[GO:0030326 "embryonic limb morphogenesis" evidence=IGI;IMP]
[GO:0030332 "cyclin binding" evidence=ISO;IPI] [GO:0030496
"midbody" evidence=IDA] [GO:0030879 "mammary gland development"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IDA;IMP]
[GO:0035108 "limb morphogenesis" evidence=ISO] [GO:0035137
"hindlimb morphogenesis" evidence=IMP] [GO:0040008 "regulation of
growth" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0043616 "keratinocyte proliferation"
evidence=IMP] [GO:0044294 "dendritic growth cone" evidence=ISO]
[GO:0044295 "axonal growth cone" evidence=ISO] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=ISO]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IGI;NAS;IMP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051782 "negative regulation of
cell division" evidence=IMP] [GO:0060037 "pharyngeal system
development" evidence=ISO] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IMP] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IMP] [GO:0060831 "smoothened
signaling pathway involved in dorsal/ventral neural tube
patterning" evidence=IMP] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IGI] [GO:0061053 "somite
development" evidence=ISO;IMP] [GO:0071397 "cellular response to
cholesterol" evidence=ISO] [GO:0072203 "cell proliferation involved
in metanephros development" evidence=IMP] [GO:0072372 "primary
cilium" evidence=IDA] [GO:0072661 "protein targeting to plasma
membrane" evidence=ISO] [GO:0097108 "hedgehog family protein
binding" evidence=ISO] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:105373
GO:GO:0007346 GO:GO:0005794 GO:GO:0048471 GO:GO:0005576
GO:GO:0043616 GO:GO:0007420 GO:GO:0005887 GO:GO:0032403
GO:GO:0003007 GO:GO:0008270 GO:GO:0008201 GO:GO:0071397
GO:GO:0032880 GO:GO:0042593 Reactome:REACT_115202 GO:GO:0015485
GO:GO:0010875 GO:GO:0000122 GO:GO:0030326 GO:GO:0060037
GO:GO:0072372 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0030496 GO:GO:0060644 GO:GO:0008544
GO:GO:0016485 GO:GO:0050680 GO:GO:0001658 GO:GO:0072661
GO:GO:0035137 GO:GO:0045668 GO:GO:0008158 GO:GO:0051782
GO:GO:0021997 GO:GO:0045879 GO:GO:0060603 GO:GO:0060831
GO:GO:0061005 GO:GO:0072203 GO:GO:0005113 GO:GO:0061053
GO:GO:0010157 GeneTree:ENSGT00680000099777 eggNOG:NOG313603
KO:K06225 CTD:5727 HOGENOM:HOG000231331 HOVERGEN:HBG003801
OrthoDB:EOG40S0DT TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:U46155
IPI:IPI00117758 PIR:T30172 RefSeq:NP_032983.1 UniGene:Mm.228798
UniGene:Mm.488634 ProteinModelPortal:Q61115 STRING:Q61115
PhosphoSite:Q61115 PRIDE:Q61115 Ensembl:ENSMUST00000021921
GeneID:19206 KEGG:mmu:19206 UCSC:uc007qxv.1 InParanoid:Q61115
NextBio:295938 Bgee:Q61115 CleanEx:MM_PTCH1 Genevestigator:Q61115
GermOnline:ENSMUSG00000021466 Uniprot:Q61115
Length = 1434
Score = 290 (107.1 bits), Expect = 8.1e-43, Sum P(3) = 8.1e-43
Identities = 66/214 (30%), Positives = 113/214 (52%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 955 IEYAQFPFYLNGLRDTSDFVEAIEKVRVICNNYT-SLGLSSYPNGYPFLFWEQYISLRHW 1013
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+++++ + F+VC + + W++ II++VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1014 LLLSISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILI 1073
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VH+ AF + GDKN R AL M A V G T L+GV++L S +
Sbjct: 1074 ASVGIGVEFTVHVALAFLTAIGDKNHRAMLALEHMFAPVLDGAVST-LLGVLMLAGSEFD 1132
Query: 759 VFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGP 792
V Y+F + S FGP
Sbjct: 1133 FIVRYFFAVLAILTVLGVLNGLVLLPVLLSFFGP 1166
Score = 244 (91.0 bits), Expect = 8.1e-43, Sum P(3) = 8.1e-43
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE + A AW++ +V++ + P S L F++ +++++ LK S I +
Sbjct: 374 NEDRAAAILEAWQRTYVEVVHQSVAP--NSTQKVLPFTT-TTLDDILKSFSDVSVIRVAS 430
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 431 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 485
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 486 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 545
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 546 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 599
Score = 60 (26.2 bits), Expect = 8.1e-43, Sum P(3) = 8.1e-43
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 718 LSSFAEKHYAPFLLKPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 771
>UNIPROTKB|Q90693 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=NAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005887
GO:GO:0007224 GO:GO:0008158 eggNOG:NOG313603 KO:K06225 EMBL:U40074
IPI:IPI00593923 PIR:T18538 RefSeq:NP_990291.1 UniGene:Gga.474
ProteinModelPortal:Q90693 STRING:Q90693 GeneID:395806
KEGG:gga:395806 CTD:5727 HOGENOM:HOG000231331 HOVERGEN:HBG003801
InParanoid:Q90693 OrthoDB:EOG40S0DT NextBio:20815874
TIGRFAMs:TIGR00918 Uniprot:Q90693
Length = 1442
Score = 289 (106.8 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 67/214 (31%), Positives = 114/214 (53%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 968 IEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYT-SLGIASYPNGYPFLFWEQYIGLRHW 1026
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+++++ + F+VC + + W++ II++VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1027 LLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSAVPVVILI 1086
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VHI AF + GDKN+R AL M A V G T L+GV++L S +
Sbjct: 1087 ASVGIGVEFTVHIALAFLTAIGDKNRRAVLALEHMFAPVLDGAVST-LLGVLMLAGSEFD 1145
Query: 759 VFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGP 792
V Y+F + S FGP
Sbjct: 1146 FIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 1179
Score = 241 (89.9 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 388 NEDKAAAILEAWQRMYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 444
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 445 GYLLMLAYACLTM-----LRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 499
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 500 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 559
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 560 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 613
Score = 63 (27.2 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PRD+
Sbjct: 731 LSTFAEKHYAPFLLKPKAKVVVIFLFLGLLGLSLYGTTRVRDGLDLTDIVPRDT 784
>UNIPROTKB|Q6UY90 [details] [associations]
symbol:Ptch1 "Protein Ptch1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0005113 "patched binding"
evidence=IEA] [GO:0005119 "smoothened binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=ISS] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0008544 "epidermis development"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0010157 "response to chlorate" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0015485 "cholesterol binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016485
"protein processing" evidence=ISS] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=IEA] [GO:0021997 "neural plate
axis specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032880 "regulation of
protein localization" evidence=IEA] [GO:0035137 "hindlimb
morphogenesis" evidence=IEA] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=ISS] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043616 "keratinocyte proliferation"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0051782 "negative
regulation of cell division" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IEA] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IEA] [GO:0061005 "cell
differentiation involved in kidney development" evidence=IEA]
[GO:0061053 "somite development" evidence=IEA] [GO:0071397
"cellular response to cholesterol" evidence=IEA] [GO:0072203 "cell
proliferation involved in metanephros development" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0097108 "hedgehog family protein binding" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 RGD:621425 GO:GO:0016021 GO:GO:0007346
GO:GO:0005794 GO:GO:0048471 GO:GO:0043616 GO:GO:0007420
GO:GO:0003007 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0009887
GO:GO:0030326 GO:GO:0060037 GO:GO:0001843 GO:GO:0040015
GO:GO:0005901 GO:GO:0043433 GO:GO:0009953 GO:GO:0030496
GO:GO:0060644 GO:GO:0008544 GO:GO:0016485 GO:GO:0050680
GO:GO:0001658 GO:GO:0072661 GO:GO:0035137 GO:GO:0007224
GO:GO:0045668 GO:GO:0008158 GO:GO:0051782 GO:GO:0021904
GO:GO:0021997 GO:GO:0008589 GO:GO:0045879 GO:GO:0060603
GO:GO:0061005 GO:GO:0072203 GO:GO:0010157
GeneTree:ENSGT00680000099777 eggNOG:NOG313603 KO:K06225 CTD:5727
HOGENOM:HOG000231331 HOVERGEN:HBG003801 OrthoDB:EOG40S0DT
TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:AY357891 IPI:IPI00396901
RefSeq:NP_446018.1 UniGene:Rn.102312 STRING:Q6UY90
Ensembl:ENSRNOT00000026287 GeneID:89830 KEGG:rno:89830
InParanoid:Q6UY90 NextBio:617756 Genevestigator:Q6UY90
Uniprot:Q6UY90
Length = 1434
Score = 287 (106.1 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 66/214 (30%), Positives = 112/214 (52%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 955 IEYAQFPFYLNGLRDTSDFVEAIEKVRVICNNYT-SLGLSSYPNGYPFLFWEQYISLRHW 1013
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+ +++ + F+VC + + W++ II++VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1014 LLLAISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILI 1073
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VH+ AF + GDKN R AL M A V G T L+GV++L S +
Sbjct: 1074 ASVGIGVEFTVHVALAFLTAIGDKNHRAMLALEHMFAPVLDGAVST-LLGVLMLAGSEFD 1132
Query: 759 VFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGP 792
V Y+F + S FGP
Sbjct: 1133 FIVRYFFAVLAILTVLGVLNGLVLLPVLLSFFGP 1166
Score = 246 (91.7 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 66/234 (28%), Positives = 102/234 (43%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE + A AW++ +V++ + P S L+F++ +++++ LK S I +
Sbjct: 374 NEDRAAAILEAWQRTYVEVVHQSVAP--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 430
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 431 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 485
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 486 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 545
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 546 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 599
Score = 60 (26.2 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 718 LSSFAEKHYAPFLLRPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 771
>UNIPROTKB|Q13635 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0008544 "epidermis development"
evidence=IEA] [GO:0010157 "response to chlorate" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051782 "negative regulation of cell division"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IEA] [GO:0072203 "cell
proliferation involved in metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEP;ISS] [GO:0009887 "organ
morphogenesis" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0016485 "protein processing"
evidence=ISS] [GO:0030326 "embryonic limb morphogenesis"
evidence=ISS] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=ISS] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=ISS] [GO:0072001 "renal
system development" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005113 "patched binding" evidence=IPI]
[GO:0097108 "hedgehog family protein binding" evidence=IPI]
[GO:0005119 "smoothened binding" evidence=IPI] [GO:0030332 "cyclin
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IMP] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=ISS;TAS] [GO:0071397
"cellular response to cholesterol" evidence=ISS;IMP] [GO:0010875
"positive regulation of cholesterol efflux" evidence=IDA]
[GO:0015485 "cholesterol binding" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IDA]
[GO:0005901 "caveola" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0021997 "neural plate axis specification"
evidence=ISS] [GO:0007420 "brain development" evidence=ISS]
[GO:0060037 "pharyngeal system development" evidence=IMP]
[GO:0021532 "neural tube patterning" evidence=IMP] [GO:0061053
"somite development" evidence=IMP] [GO:0035108 "limb morphogenesis"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 GO:GO:0043231
GO:GO:0016021 GO:GO:0007346 GO:GO:0048471 Reactome:REACT_111102
GO:GO:0043616 GO:GO:0007420 GO:GO:0003007 GO:GO:0008201
GO:GO:0071397 GO:GO:0032880 GO:GO:0042593 GO:GO:0015485
GO:GO:0010875 GO:GO:0000122 GO:GO:0009887 GO:GO:0030326
GO:GO:0060037 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0009953 GO:GO:0030496
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:hedgehog_2pathway GO:GO:0060644
GO:GO:0008544 GO:GO:0016485 GO:GO:0050680 GO:GO:0001658
GO:GO:0072661 GO:GO:0035137 GO:GO:0007224 GO:GO:0045668
GO:GO:0008158 GO:GO:0051782 GO:GO:0021904
Pathway_Interaction_DB:glypican_3pathway GO:GO:0021997
GO:GO:0045879 Orphanet:93925 Orphanet:93924 Orphanet:280200
Orphanet:93926 Orphanet:220386 Orphanet:280195 GO:GO:0060603
GO:GO:0072001 GO:GO:0021532 GO:GO:0061005 GO:GO:0072203
GO:GO:0061053 GO:GO:0010157 eggNOG:NOG313603 KO:K06225 CTD:5727
HOVERGEN:HBG003801 OrthoDB:EOG40S0DT TIGRFAMs:TIGR00918 EMBL:U59464
EMBL:U43148 EMBL:AL161729 EMBL:AB189436 EMBL:AB189437 EMBL:AB189438
EMBL:AB189439 EMBL:AB189440 EMBL:BC043542 EMBL:AB239329
IPI:IPI00014374 IPI:IPI00643862 IPI:IPI00654901 IPI:IPI00844057
RefSeq:NP_000255.2 RefSeq:NP_001077071.1 RefSeq:NP_001077072.1
RefSeq:NP_001077073.1 RefSeq:NP_001077074.1 RefSeq:NP_001077075.1
RefSeq:NP_001077076.1 UniGene:Hs.494538 ProteinModelPortal:Q13635
SMR:Q13635 DIP:DIP-44940N STRING:Q13635 PhosphoSite:Q13635
DMDM:160415977 PRIDE:Q13635 DNASU:5727 Ensembl:ENST00000331920
Ensembl:ENST00000375274 Ensembl:ENST00000418258
Ensembl:ENST00000421141 Ensembl:ENST00000429896
Ensembl:ENST00000430669 Ensembl:ENST00000437951
Ensembl:ENST00000468211 Ensembl:ENST00000546820
Ensembl:ENST00000547672 Ensembl:ENST00000551845
Ensembl:ENST00000553011 GeneID:5727 KEGG:hsa:5727 UCSC:uc004avk.4
UCSC:uc004avm.4 UCSC:uc010mrr.3 GeneCards:GC09M098205
HGNC:HGNC:9585 HPA:CAB013717 MIM:109400 MIM:601309 MIM:605462
MIM:610828 neXtProt:NX_Q13635 Orphanet:377 PharmGKB:PA33937
InParanoid:Q13635 OMA:APDRDYL PhylomeDB:Q13635 ChiTaRS:PTCH1
GenomeRNAi:5727 NextBio:22266 ArrayExpress:Q13635 Bgee:Q13635
CleanEx:HS_PTCH1 Genevestigator:Q13635 GermOnline:ENSG00000185920
Uniprot:Q13635
Length = 1447
Score = 289 (106.8 bits), Expect = 2.3e-42, Sum P(3) = 2.3e-42
Identities = 67/214 (31%), Positives = 113/214 (52%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L D+V ++ R S + SL + +P ++++EQY+ +
Sbjct: 969 IEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYT-SLGLSSYPNGYPFLFWEQYIGLRHW 1027
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+ +++ + F+VC + + W++ II++VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1028 LLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILI 1087
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VH+ AF + GDKN+R AL M A V G T L+GV++L S +
Sbjct: 1088 ASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVST-LLGVLMLAGSEFD 1146
Query: 759 VFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGP 792
V Y+F + S FGP
Sbjct: 1147 FIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 1180
Score = 241 (89.9 bits), Expect = 2.3e-42, Sum P(3) = 2.3e-42
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 388 NEDKAAAILEAWQRTYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 444
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 445 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 499
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 500 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 559
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 560 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 613
Score = 60 (26.2 bits), Expect = 2.3e-42, Sum P(3) = 2.3e-42
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 732 LSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 785
>UNIPROTKB|I3LVF2 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097108 "hedgehog family protein binding" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0072203 "cell proliferation involved in metanephros
development" evidence=IEA] [GO:0071397 "cellular response to
cholesterol" evidence=IEA] [GO:0061053 "somite development"
evidence=IEA] [GO:0061005 "cell differentiation involved in kidney
development" evidence=IEA] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IEA] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0051782 "negative regulation of cell
division" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0021997 "neural plate axis specification"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=IEA] [GO:0010875
"positive regulation of cholesterol efflux" evidence=IEA]
[GO:0010157 "response to chlorate" evidence=IEA] [GO:0008589
"regulation of smoothened signaling pathway" evidence=IEA]
[GO:0008544 "epidermis development" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005901 "caveola" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005119 "smoothened binding"
evidence=IEA] [GO:0005113 "patched binding" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0007346
GO:GO:0005794 GO:GO:0048471 GO:GO:0043616 GO:GO:0007420
GO:GO:0003007 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0030326
GO:GO:0060037 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0030496 GO:GO:0060644 GO:GO:0008544
GO:GO:0016485 GO:GO:0050680 GO:GO:0001658 GO:GO:0072661
GO:GO:0035137 GO:GO:0007224 GO:GO:0045668 GO:GO:0008158
GO:GO:0051782 GO:GO:0021904 GO:GO:0021997 GO:GO:0045879
GO:GO:0060603 GO:GO:0061005 GO:GO:0072203 GO:GO:0010157
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:FP312856 EMBL:FP326685 Ensembl:ENSSSCT00000029331
Uniprot:I3LVF2
Length = 1453
Score = 287 (106.1 bits), Expect = 3.8e-42, Sum P(3) = 3.8e-42
Identities = 66/214 (30%), Positives = 113/214 (52%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 972 IEYAQFPFYLNGLRDTSDFVEAIEKVRTICNNYT-SLGLSSYPNGYPFLFWEQYIGLRHW 1030
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+++++ + F+VC + + W++ II+ VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 1031 LLLSISVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAVPVVILI 1090
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VH+ AF + GDKN+R AL M A V G T L+GV++L S +
Sbjct: 1091 ASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVST-LLGVLMLAGSEFD 1149
Query: 759 VFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGP 792
V Y+F + S FGP
Sbjct: 1150 FIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 1183
Score = 241 (89.9 bits), Expect = 3.8e-42, Sum P(3) = 3.8e-42
Identities = 66/234 (28%), Positives = 101/234 (43%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 391 NEDKAAAILEAWQRTYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 447
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 448 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 502
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 503 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 562
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
+ + IP+PA R FS+ + F A++ D R ED+R+D C
Sbjct: 563 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCC 616
Score = 60 (26.2 bits), Expect = 3.8e-42, Sum P(3) = 3.8e-42
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 735 LSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 788
>ZFIN|ZDB-GENE-980526-44 [details] [associations]
symbol:ptch2 "patched 2" species:7955 "Danio rerio"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0048635 "negative regulation of muscle organ
development" evidence=IGI] [GO:0010002 "cardioblast
differentiation" evidence=IGI] [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IMP] [GO:0009954 "proximal/distal pattern
formation" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-980526-44 GO:GO:0016021 GO:GO:0010002 GO:GO:0043010
GO:GO:0001649 GO:GO:0009954 GO:GO:0007224 GO:GO:0008158
GO:GO:0031290 GO:GO:0048635 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00918 EMBL:BX649493 IPI:IPI00500992
Ensembl:ENSDART00000077304 ArrayExpress:F1Q8S0 Bgee:F1Q8S0
Uniprot:F1Q8S0
Length = 1442
Score = 272 (100.8 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 58/216 (26%), Positives = 113/216 (52%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L + D++ ++ + R ++ +P ++++EQY+ +
Sbjct: 958 LEFAQFPFYLNGLRQASDFIEAIESVRTICEEFMRQ-GIKNYPNGYPFLFWEQYIGLRHW 1016
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+++++ + F+VC I + W++ +I+ +L M+ V+L G+M ++ I+L+A+ VV L+
Sbjct: 1017 FLLSISVVLACTFLVCAILLLNPWTAGVIVFILAMMTVELFGIMGLIGIKLSAIPVVILI 1076
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VHI F + GD+N R A+ M A V G ++ L+GV++L S +
Sbjct: 1077 ASVGIGVEFTVHIALGFLTAIGDRNTRSAVAMEHMFAPVIDG-AISTLLGVLMLAGSEFD 1135
Query: 759 VFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGPPS 794
+ Y+F + S+ GPP+
Sbjct: 1136 FIMRYFFAVLAILTLLGILNGLVLLPVLLSLMGPPA 1171
Score = 237 (88.5 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 60/240 (25%), Positives = 107/240 (44%)
Query: 86 YPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKREST 145
Y +++ E T +W++ FV++ + P S N+ AFS+ +++ + +K S
Sbjct: 363 YEIHDINWNEDKATAILESWQRKFVEVVHGSI-PQNSSSNV-YAFST-TTLNDIMKSFSD 419
Query: 146 ADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAI 205
I + YL+M AY +T+ L S +
Sbjct: 420 VSVIRVAGGYLLMLAYACVTM-----LRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLL 474
Query: 206 GVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASL 265
G+ +V+PFL L +GVD+M +L H+ + +P + R + L G S+ L S+
Sbjct: 475 GLSFNAATTQVLPFLALGIGVDDMFLLAHSFTETRSNIPFKERTGDCLRRTGTSVALTSI 534
Query: 266 SEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
+ ++AF + + +P+PA R FS+ + F A++ D R EDKR+D + C
Sbjct: 535 NNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSLDLHRREDKRLDILCC 594
Score = 69 (29.3 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYF 406
L+ + +E +A +L K V+ +FVA S+ T + GL ++PRD+ +
Sbjct: 721 LSSFAREKYAPLLLKPETKTVVVVVFVALLSLSLYGTTMVHDGLYLTDIVPRDTQEYEFI 780
Query: 407 NNISEHLRIGPPLYFVVKNYNYSSESRQTNQL 438
++ + ++Y+ RQ QL
Sbjct: 781 TAQFKYFSFYNMYLVTMDGFDYARSQRQLLQL 812
>UNIPROTKB|E1B778 [details] [associations]
symbol:PTCH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043588 "skin development" evidence=IEA] [GO:0042633
"hair cycle" evidence=IEA] [GO:0005119 "smoothened binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0043588
GO:GO:0008158 GO:GO:0042633 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00918 CTD:8643 KO:K11101 OMA:CPPSAPN EMBL:DAAA02009018
IPI:IPI00690516 RefSeq:XP_002686477.1 RefSeq:XP_584648.3
UniGene:Bt.30284 PRIDE:E1B778 Ensembl:ENSBTAT00000033308
GeneID:507948 KEGG:bta:507948 NextBio:20868285 Uniprot:E1B778
Length = 1207
Score = 279 (103.3 bits), Expect = 2.6e-39, Sum P(3) = 2.6e-39
Identities = 67/220 (30%), Positives = 114/220 (51%)
Query: 591 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAV 650
L + D+V ++ AR + S + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACAEASQA-GVHAYPSGSPFLFWEQYLGLRRCFLLAVCILLLCT 975
Query: 651 FVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVH 710
F+VC + + W++A+I+LVL M+ V+L G+M L I+L+A+ VV LV ++GI VEF VH
Sbjct: 976 FLVCALLLLNPWTAALIVLVLAMMTVELFGIMGFLGIKLSAIPVVILVASIGIGVEFTVH 1035
Query: 711 ITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYXX 770
+ F + G +N R AL A V G ++ L+G+++L S + V Y+F +
Sbjct: 1036 VALGFLTAQGSRNLRAARALERTFAPVTDG-AISTLLGLLMLAGSNFDFIVRYFFVVLTI 1094
Query: 771 XXXXXXXXXXXXXXXXXSVFGPPSRCMLVERQEERPSVSS 810
S+ GPP +V+ +E V S
Sbjct: 1095 LTLLGLLHGLVLLPVLLSILGPPPE--VVQMYKESAEVLS 1132
Score = 230 (86.0 bits), Expect = 2.6e-39, Sum P(3) = 2.6e-39
Identities = 62/222 (27%), Positives = 102/222 (45%)
Query: 104 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 163
AW++ FVQLA+ E LP S+ + AFSS +++++ L S A +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPENASQQIH-AFSS-TTLDDILHAFSEVSAARVVGGYLLMLAYAC 410
Query: 164 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 223
+T+ L + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALG 465
Query: 224 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 283
+GVD++ +L HA PL+ R L G S+TL S++ ++AF + + +P+PA R
Sbjct: 466 IGVDDIFLLAHAFTEAPPGSPLQERTGECLRRTGTSVTLTSINNMVAFFMAALVPIPALR 525
Query: 284 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
FS+ + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAVLSLDLRRRHCRRLDVLCC 567
Score = 49 (22.3 bits), Expect = 2.6e-39, Sum P(3) = 2.6e-39
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 398
LA + + A +L K V+ LF A S+ T ++ GL V+PR
Sbjct: 668 LAHFARSQFAPLLLQSHTKAVVLVLFGALLGLSLYGATLVQDGLALTDVVPR 719
>UNIPROTKB|E2RHI9 [details] [associations]
symbol:PTCH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0008158
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 CTD:8643 KO:K11101
OMA:CPPSAPN EMBL:AAEX03009785 RefSeq:XP_539636.3
Ensembl:ENSCAFT00000007564 GeneID:482519 KEGG:cfa:482519
Uniprot:E2RHI9
Length = 1207
Score = 280 (103.6 bits), Expect = 3.3e-39, Sum P(3) = 3.3e-39
Identities = 67/220 (30%), Positives = 112/220 (50%)
Query: 591 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAV 650
L + D+V ++ AR + + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACAEAGQA-GVRAYPSGSPFLFWEQYLGLRRYFLLAICILLVCT 975
Query: 651 FVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVH 710
F+VC + + W++ +I+LVL M+ V+L G+M L I+L+A+ VV LV +VGI VEF VH
Sbjct: 976 FLVCALLLLNPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVVILVASVGIGVEFTVH 1035
Query: 711 ITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYXX 770
+ F + G +N R AL A V G T L+G+++L S + + Y+F +
Sbjct: 1036 VALGFLTTQGSRNLRAAHALERTFAPVTDGAVST-LLGLLMLAGSNFDFIIRYFFVVLTV 1094
Query: 771 XXXXXXXXXXXXXXXXXSVFGPPSRCMLVERQEERPSVSS 810
S+ GPP +V+ +E P V S
Sbjct: 1095 LTLLGLLHGLVLLPVLLSILGPPPE--VVQMYKESPEVLS 1132
Score = 231 (86.4 bits), Expect = 3.3e-39, Sum P(3) = 3.3e-39
Identities = 62/222 (27%), Positives = 101/222 (45%)
Query: 104 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 163
AW++ FVQLA+ E LP S+ + AFSS +++++ L S A +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPQNSSQQIH-AFSS-TTLDDILHAFSEVSAARVVGGYLLMLAYAC 410
Query: 164 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 223
+T+ L + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALG 465
Query: 224 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 283
+GVD++ +L HA PL+ R L G S+ L S+S ++AF + + +P+PA R
Sbjct: 466 IGVDDIFLLAHAFTEAPPGTPLQERTGECLQRTGTSVALTSISHMVAFFMAALVPIPALR 525
Query: 284 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
FS+ + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAVLSLDLHRRHCQRLDVLCC 567
Score = 46 (21.3 bits), Expect = 3.3e-39, Sum P(3) = 3.3e-39
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 398
LA + + A +L K V+ LF A S+ T ++ GL V+PR
Sbjct: 668 LAHFARSQFAPLLLQSHSKAIVLVLFGALLGLSLYGATLVQDGLALTDVVPR 719
>MGI|MGI:1095405 [details] [associations]
symbol:Ptch2 "patched homolog 2" species:10090 "Mus
musculus" [GO:0005119 "smoothened binding" evidence=ISO]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0008544
"epidermis development" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042633 "hair cycle" evidence=IMP] [GO:0043588 "skin
development" evidence=IMP] [GO:0097108 "hedgehog family protein
binding" evidence=ISO] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:1095405
GO:GO:0016021 GO:GO:0043588 GO:GO:0008158 GO:GO:0042633
EMBL:AL671866 GeneTree:ENSGT00680000099777 eggNOG:NOG313603
HOGENOM:HOG000231331 HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 CTD:8643
KO:K11101 OMA:CPPSAPN OrthoDB:EOG49CQ6V EMBL:AJ133482 EMBL:AJ133483
EMBL:AJ133484 EMBL:AJ133485 EMBL:AB010833 IPI:IPI00131879
PIR:T13952 RefSeq:NP_032984.1 UniGene:Mm.287037
ProteinModelPortal:O35595 STRING:O35595 PhosphoSite:O35595
PRIDE:O35595 DNASU:19207 Ensembl:ENSMUST00000030443 GeneID:19207
KEGG:mmu:19207 UCSC:uc008uhx.1 InParanoid:A2AE82 NextBio:295942
Bgee:O35595 CleanEx:MM_PTCH2 Genevestigator:O35595
GermOnline:ENSMUSG00000028681 Uniprot:O35595
Length = 1182
Score = 277 (102.6 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 64/212 (30%), Positives = 109/212 (51%)
Query: 591 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAV 650
L + D+V ++ AR + + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACTEAGQA-GVHAYPSGSPFLFWEQYLGLRRCFLLAVCILLVCT 975
Query: 651 FVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVH 710
F+VC + S W++ +I+LVL M+ V+L G+M L I+L+A+ VV LV ++GI VEF VH
Sbjct: 976 FLVCALLLLSPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVVILVASIGIGVEFTVH 1035
Query: 711 ITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYXX 770
+ F S G +N R AL A V G T L+G+++L S + + Y+F +
Sbjct: 1036 VALGFLTSHGSRNLRAASALEQTFAPVTDGAVST-LLGLLMLAGSNFDFIIRYFFVVLTV 1094
Query: 771 XXXXXXXXXXXXXXXXXSVFGPPSRCMLVERQ 802
S+ GPP + + V ++
Sbjct: 1095 LTLLGLLHGLLLLPVLLSILGPPPQVVQVYKE 1126
Score = 231 (86.4 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 60/222 (27%), Positives = 103/222 (46%)
Query: 104 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 163
AW++ FVQLA+ E LP S+ + AFSS +++++ L+ S +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPANASQQIH-AFSS-TTLDDILRAFSEVSTTRVVGGYLLMLAYAC 410
Query: 164 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 223
+T+ L + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALG 465
Query: 224 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 283
+GVD++ +L HA + + PL R+ L G S+ L S++ ++AF + + +P+PA R
Sbjct: 466 IGVDDIFLLAHAFTKAPPDTPLPERMGECLRSTGTSVALTSVNNMVAFFMAALVPIPALR 525
Query: 284 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
FS+ + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAILSLDLRRRHRQRLDVLCC 567
Score = 43 (20.2 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 398
LA + + A +L K V+ F A S+ T ++ GL V+PR
Sbjct: 668 LAHFARYQFAPLLLQTRAKALVLLFFGALLGLSLYGATLVQDGLALTDVVPR 719
>UNIPROTKB|Q9Y6C5 [details] [associations]
symbol:PTCH2 "Protein patched homolog 2" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042633 "hair cycle" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0097108 "hedgehog family protein
binding" evidence=TAS;IPI] [GO:0005119 "smoothened binding"
evidence=IPI] [GO:0008158 "hedgehog receptor activity"
evidence=TAS] [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=TAS] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 Reactome:REACT_111102 GO:GO:0043588
Pathway_Interaction_DB:hedgehog_2pathway MIM:155255 GO:GO:0008158
EMBL:AL592166 GO:GO:0045879 Orphanet:141276 EMBL:AL136380
GO:GO:0042633 eggNOG:NOG313603 HOGENOM:HOG000231331
HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 MIM:605462 EMBL:AF091501
EMBL:AF087651 EMBL:AF119569 EMBL:AY358555 EMBL:AY359016
EMBL:AY438664 IPI:IPI00419647 IPI:IPI00471943 RefSeq:NP_001159764.1
RefSeq:NP_003729.3 UniGene:Hs.591497 ProteinModelPortal:Q9Y6C5
IntAct:Q9Y6C5 STRING:Q9Y6C5 PhosphoSite:Q9Y6C5 DMDM:12643356
PRIDE:Q9Y6C5 DNASU:8643 Ensembl:ENST00000372192
Ensembl:ENST00000447098 GeneID:8643 KEGG:hsa:8643 UCSC:uc010olf.2
UCSC:uc021omv.1 CTD:8643 GeneCards:GC01M045286 HGNC:HGNC:9586
HPA:HPA046839 MIM:603673 neXtProt:NX_Q9Y6C5 PharmGKB:PA33938
InParanoid:Q9Y6C5 KO:K11101 OMA:CPPSAPN OrthoDB:EOG49CQ6V
PhylomeDB:Q9Y6C5 GenomeRNAi:8643 NextBio:32403 ArrayExpress:Q9Y6C5
Bgee:Q9Y6C5 CleanEx:HS_PTCH2 Genevestigator:Q9Y6C5
GermOnline:ENSG00000117425 GO:GO:0097108 Uniprot:Q9Y6C5
Length = 1203
Score = 277 (102.6 bits), Expect = 7.3e-38, Sum P(4) = 7.3e-38
Identities = 65/220 (29%), Positives = 112/220 (50%)
Query: 591 LNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAV 650
L + D+V ++ AR + + + +P ++++EQYL + R L+ + I +
Sbjct: 917 LQKTADFVEAIEGARAACAEAGQA-GVHAYPSGSPFLFWEQYLGLRRCFLLAVCILLVCT 975
Query: 651 FVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVH 710
F+VC + + W++ +I+LVL M+ V+L G+M L I+L+A+ VV LV +VGI VEF VH
Sbjct: 976 FLVCALLLLNPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVVILVASVGIGVEFTVH 1035
Query: 711 ITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYXX 770
+ F + G +N R AL A V G ++ L+G+++L S + V Y+F
Sbjct: 1036 VALGFLTTQGSRNLRAAHALEHTFAPVTDG-AISTLLGLLMLAGSHFDFIVRYFFAALTV 1094
Query: 771 XXXXXXXXXXXXXXXXXSVFGPPSRCMLVERQEERPSVSS 810
S+ GPP +++ +E P + S
Sbjct: 1095 LTLLGLLHGLVLLPVLLSILGPPPE--VIQMYKESPEILS 1132
Score = 227 (85.0 bits), Expect = 7.3e-38, Sum P(4) = 7.3e-38
Identities = 61/222 (27%), Positives = 101/222 (45%)
Query: 104 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 163
AW++ FVQLA+ E LP S+ + AFSS +++++ L S A +V YL+M AY
Sbjct: 354 AWQRRFVQLAQ-EALPENASQQIH-AFSS-TTLDDILHAFSEVSAARVVGGYLLMLAYAC 410
Query: 164 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 223
+T+ L + +G+ +V+PFL L
Sbjct: 411 VTM-----LRWDCAQSQGSVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALG 465
Query: 224 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 283
+GVD++ +L HA PL+ R+ L G S+ L S++ + AF + + +P+PA R
Sbjct: 466 IGVDDVFLLAHAFTEALPGTPLQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALR 525
Query: 284 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
FS+ + F A++ D R +R+D + C
Sbjct: 526 AFSLQAAIVVGCTFVAVMLVFPAILSLDLRRRHCQRLDVLCC 567
Score = 46 (21.3 bits), Expect = 7.3e-38, Sum P(4) = 7.3e-38
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPR 398
LA + + A +L K V+ LF A S+ T ++ GL V+PR
Sbjct: 668 LAHFARYQFAPLLLQSHAKAIVLVLFGALLGLSLYGATLVQDGLALTDVVPR 719
Score = 38 (18.4 bits), Expect = 7.3e-38, Sum P(4) = 7.3e-38
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 397 PRDSYLQGYFNNISEHLRIGP--PLYF 421
P +L ++ E+LRI P PL F
Sbjct: 881 PPPEWLHDKYDTTGENLRIPPAQPLEF 907
>UNIPROTKB|K7ERM4 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR003392
Pfam:PF02460 HGNC:HGNC:7897 EMBL:AC026634 EMBL:AC010853
Ensembl:ENST00000586150 Uniprot:K7ERM4
Length = 175
Score = 393 (143.4 bits), Expect = 1.0e-35, P = 1.0e-35
Identities = 73/147 (49%), Positives = 110/147 (74%)
Query: 624 VFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVM 682
VFY+++EQYL I + NL +++GA+F+V ++ C WS+ I+ + M++V++ GVM
Sbjct: 2 VFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVM 61
Query: 683 AILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVS-SGDKNQRMKEALGTMGASVFSGI 741
+ I LNAVS+VNLVM+ GI+VEFC HIT AF+VS G + +R +EAL MG+SVFSGI
Sbjct: 62 WLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGI 121
Query: 742 TLTKLVGVIVLCFSRTEVFVVYYFQMY 768
TLTK G++VL F+++++F ++YF+MY
Sbjct: 122 TLTKFGGIVVLAFAKSQIFQIFYFRMY 148
>UNIPROTKB|F1LW60 [details] [associations]
symbol:F1LW60 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0043588 GO:GO:0008158 GO:GO:0042633
IPI:IPI00870096 Ensembl:ENSRNOT00000033843 Uniprot:F1LW60
Length = 948
Score = 230 (86.0 bits), Expect = 8.6e-34, Sum P(2) = 8.6e-34
Identities = 61/222 (27%), Positives = 102/222 (45%)
Query: 104 AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 163
AW++ FVQLA+ E LP S+ + AFSS +++++ L+ S A +V YL+M AY
Sbjct: 267 AWQRRFVQLAQ-EALPANASQQIH-AFSS-TTLDDILQAFSEVSATRVVGGYLLMLAYAC 323
Query: 164 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 223
+T+ L + +G+ +V+PFL L
Sbjct: 324 ITM-----LRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALG 378
Query: 224 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 283
+GVD++ +L HA + PL R+ L G S+ L S++ ++AF + +P+PA R
Sbjct: 379 IGVDDIFLLAHAFTKAPPNTPLPERMGECLRRTGTSVALTSINNMVAFFMAVLVPIPALR 438
Query: 284 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
FS+ + F A++ D R +R+D + C
Sbjct: 439 AFSLQAAIVVGCNFAAVMLVFPAVLSLDLRRRHRQRLDVLCC 480
Score = 227 (85.0 bits), Expect = 8.6e-34, Sum P(2) = 8.6e-34
Identities = 51/141 (36%), Positives = 82/141 (58%)
Query: 628 YFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKI 687
++EQY + R L+ + I + F+VC + + W++ +I+LVL M+ V+L G+M L I
Sbjct: 720 FWEQYXGLRRCFLLPVCILLLCTFLVCALLLLNPWTAGLIVLVLAMMTVELFGIMGFLGI 779
Query: 688 QLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLV 747
+L+A+ VV LV +VGI VEF VH+ F S G +N R AL A V G T L+
Sbjct: 780 KLSAIPVVILVASVGIGVEFTVHVALGFLTSHGSRNLRAARALEQTFAPVTDGAVST-LL 838
Query: 748 GVIVLCFSRTEVFVVYYFQMY 768
G+++L S + V + +++
Sbjct: 839 GLLMLAGSNFDSLVRFLLRVF 859
>ZFIN|ZDB-GENE-041210-239 [details] [associations]
symbol:si:ch211-250m6.7 "si:ch211-250m6.7"
species:7955 "Danio rerio" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-041210-239 GO:GO:0016021 GO:GO:0008158
HOGENOM:HOG000115764 HOVERGEN:HBG082604 EMBL:BX005238
IPI:IPI00489183 ProteinModelPortal:Q5RJ13 InParanoid:Q5RJ13
Uniprot:Q5RJ13
Length = 827
Score = 221 (82.9 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 66/254 (25%), Positives = 122/254 (48%)
Query: 218 PFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFI 277
PFL+L VGVD+M I++ + ++ ++ +E R++ A E G SIT+ +L++VLAF +G
Sbjct: 318 PFLILGVGVDDMFIMISSWQKTAVDKGVEFRLAEAYKEAGVSITITTLTDVLAFYIGLLT 377
Query: 278 PMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADS-- 335
P + + F M IT F A + + R + R + C+ + D+
Sbjct: 378 PFRSVQSFCMYTSTALLFCYLFNITFFGACLALNGRREKSNR-HFLTCMTVPKPSGDAVS 436
Query: 336 -------DKGIGQRKPGLLARYMKEVHATILS-LWGVKIAVISLFVAFTLASIALCTRIE 387
D+ + + + K+ + L+ +W VK+ V ++ + SI C ++E
Sbjct: 437 CCAGGAFDENTNKEHEMPMEVFFKKYYGPFLAKVW-VKVLVCLIYAGYLAVSIYGCFQME 495
Query: 388 PGLEQKIVLPRDSYLQGYFNNISEHLR-IGPPLYFVVKN--YNY-SSESRQTNQLCSISQ 443
GL+ K + SY+ Y++ E GP + V+K+ + Y S ++R++ LC +
Sbjct: 496 EGLDLKHLATDGSYVADYYDREDEFFSAFGPNVMLVIKDEHFQYWSPDARKSLDLCLKNF 555
Query: 444 CDSNSLLNEISRAS 457
D + +EI S
Sbjct: 556 RDLTMVDSEIPLTS 569
Score = 218 (81.8 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 61/233 (26%), Positives = 115/233 (49%)
Query: 541 FKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNS 600
FK +LP FLN ++ H + ++ +Q + +T ++ + D +N+
Sbjct: 590 FKTQLPAFLNR------SEFSHDVHFTDNNINATRM-FIQTVNIKT---AIDEK-DMLNA 638
Query: 601 MRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITT-- 658
R A R+ + + + Y ++YF+QY I + NL A + V+ L+
Sbjct: 639 FREAAHTCGRLETPVDLIV--YHPAFIYFDQYAVIVSNTIQNLVAATCVMLVISLLLIPH 696
Query: 659 --CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAF- 715
CS W + + ++V L G MA+ I L++VS++NLV+ +G +V+F HI++AF
Sbjct: 697 PLCSLW----VTFSIASVIVGLAGFMALWDISLDSVSMINLVICIGFSVDFSAHISYAFV 752
Query: 716 SVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMY 768
S N++ +AL +G + G T + GV+VL +++ +F ++ M+
Sbjct: 753 SSEKSSANEKATDALHKLGYPIIQGAVST-IAGVVVLAAAKSYIFRTFFKIMF 804
Score = 45 (20.9 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 32 FDDFGGVEHVKYCFQHYTST-ESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNN 90
F++ ++ QH +T E + KG S A+ N ++ + +TYP+N+
Sbjct: 114 FEEILALDRQVKTLQHLGNTFEKLCAKIKGNC-VSNAVLDIIRYNAADIDSVTITYPIND 172
Score = 44 (20.5 bits), Expect = 7.7e-32, Sum P(3) = 7.7e-32
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 22 LQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASA 81
L YF + K+ + +E F +YT E ++ + F GN S
Sbjct: 200 LYYFLDEKKSKGNADWLEGFIQFFSNYTDQEKVSVSYFTSVSRQNE---FEGNTDSVIPL 256
Query: 82 FVVTYP--VNNAV 92
F +TY +N AV
Sbjct: 257 FSITYALAINIAV 269
>WB|WBGene00000902 [details] [associations]
symbol:daf-6 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0046626 "regulation of insulin receptor signaling
pathway" evidence=IGI] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0031410 "cytoplasmic vesicle" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0005886 GO:GO:0018996 GO:GO:0031410
GO:GO:0000122 GO:GO:0009653 GO:GO:0008158 GO:GO:0046626 EMBL:Z69884
eggNOG:NOG149152 GeneTree:ENSGT00680000099845 HOGENOM:HOG000018323
PIR:T21612 RefSeq:NP_510472.2 ProteinModelPortal:Q19945
STRING:Q19945 EnsemblMetazoa:F31F6.5 GeneID:181584
KEGG:cel:CELE_F31F6.5 UCSC:F31F6.5 CTD:181584 WormBase:F31F6.5
InParanoid:Q19945 OMA:ILNQWIM NextBio:914544 Uniprot:Q19945
Length = 913
Score = 204 (76.9 bits), Expect = 5.6e-30, Sum P(3) = 5.6e-30
Identities = 53/205 (25%), Positives = 104/205 (50%)
Query: 560 GGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEI 619
GG + +++ + + G QA FR + L ++ N + A + ++D +
Sbjct: 676 GGSTQWASNLKINKTD-GSFQA--FR-FQIALKNFVE-PNDHKHAAQLLRDIADHQPFNV 730
Query: 620 FPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLM 679
Y + + +QYL I + N+ I++ + VV + S S +I + + I + +
Sbjct: 731 VVYHEAFPFADQYLIILPATIQNVVISLLCMAVVSFLLVPSLPSGFVIFVSIVSINIGVF 790
Query: 680 GVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFS 739
G M + + L+AVS+++++M++G AV+ HI +AF S GD QR+ AL T+G +F
Sbjct: 791 GYMTLWGVNLDAVSMISIIMSIGFAVDLSAHIIYAFVTSHGDTKQRVIGALETLGWPIFQ 850
Query: 740 GITLTKLVGVIVLCFSRTEVFVVYY 764
G + T + G+ +L + +V++
Sbjct: 851 GASST-IAGISILYTVDAYIILVFF 874
Score = 174 (66.3 bits), Expect = 5.6e-30, Sum P(3) = 5.6e-30
Identities = 47/196 (23%), Positives = 89/196 (45%)
Query: 113 AKDELLPMVQSKN-LTLAFSSESSIEEELKRESTADAITIVISYLV--MFAYIS-LTLGD 168
A + L V S + +TL+F+ S+E+ L + A V+S+ V M+A +S TL
Sbjct: 230 ALETFLNQVYSSDVITLSFAHYQSLEDGLDENAKAFVPNFVVSFFVLAMYALVSSFTLKS 289
Query: 169 TPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDN 228
+ +I F +GV+ +I +IPFL++A+G+D+
Sbjct: 290 SSATKIDWISSKPWLAAAGMFSTVLSIISAFGFLFILGVRYN-VINTIIPFLIIAIGIDD 348
Query: 229 MCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMX 288
M ++ + L + R+S L G ++T+ ++++V++FA+G +P + F +
Sbjct: 349 MFLMNACWDQTSKSLSVPERMSKTLSHAGVAVTITNVTDVMSFAIGCITDLPGIQFFCIY 408
Query: 289 XXXXXXXXXXXQITAF 304
Q+T F
Sbjct: 409 ACVSVAFSYFYQLTFF 424
Score = 90 (36.7 bits), Expect = 5.6e-30, Sum P(3) = 5.6e-30
Identities = 35/164 (21%), Positives = 68/164 (41%)
Query: 335 SDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKI 394
S K + + + ++ +++ + V+I +FV + ++ C GL
Sbjct: 517 SKKSKDREEKDRIVHFIGKIYGPFILSNSVRIFSGLIFVVYLAIAMYGCYNFREGLNPGN 576
Query: 395 VLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNS---LLN 451
++ D Y+ YF++I RIG L+ V N + S N+L + N+ L
Sbjct: 577 LVTNDHYIAKYFSDIKHFWRIGAQLHVAVLNPPNLTISENRNELLKVVSAFENTQYTLGR 636
Query: 452 EISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGS 495
E + L+ +Y+++ A D +W + K+T GS
Sbjct: 637 EGTVFFLLEYLNYLSELNAEVEDTERLWKTK--LNSWLKYTGGS 678
Score = 37 (18.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 328 LSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWG------VKIAVISLFVAFTLASIA 381
L SS A I KP L A M +I+S +G V+ VI+ + F + +I
Sbjct: 287 LKSSSATKIDWISS-KPWLAAAGMFSTVLSIISAFGFLFILGVRYNVINTIIPFLIIAIG 345
Query: 382 L 382
+
Sbjct: 346 I 346
Score = 37 (18.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 359 LSLWGVKIAVISL 371
++LWGV + +S+
Sbjct: 793 MTLWGVNLDAVSM 805
>MGI|MGI:1921925 [details] [associations]
symbol:Ptchd3 "patched domain containing 3" species:10090
"Mus musculus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:1921925
GO:GO:0016021 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099845 CTD:374308 HOGENOM:HOG000115764
HOVERGEN:HBG082604 OrthoDB:EOG4TQM8H EMBL:AB235902 EMBL:AK015440
EMBL:AK017136 EMBL:AL663041 IPI:IPI00137418 IPI:IPI00874330
RefSeq:NP_083325.1 UniGene:Mm.61213 ProteinModelPortal:Q0EEE2
SMR:Q0EEE2 PhosphoSite:Q0EEE2 PRIDE:Q0EEE2
Ensembl:ENSMUST00000036690 GeneID:74675 KEGG:mmu:74675
UCSC:uc007mwf.2 InParanoid:Q0EEE2 OMA:HERMGEC NextBio:341360
Bgee:Q0EEE2 CleanEx:MM_PTCHD3 Genevestigator:Q0EEE2 Uniprot:Q0EEE2
Length = 906
Score = 207 (77.9 bits), Expect = 4.9e-29, Sum P(2) = 4.9e-29
Identities = 49/176 (27%), Positives = 97/176 (55%)
Query: 599 NSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLIT- 657
N R + S ++++ ++ + Y+ ++YF+QY I + N+ IA A+F+V L+
Sbjct: 717 NKKRMLLKLRS-IAENCEVPLMVYNQAFIYFDQYAAIIENTVRNVMIASTAMFIVSLLLI 775
Query: 658 ---TCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHA 714
CS W + + ++V + G MA + L+++S++NLV+ +G + +F HI++A
Sbjct: 776 PHPVCSLW----VTFAIASVIVGVTGFMAFWNVNLDSISMINLVICIGFSFDFSAHISYA 831
Query: 715 FSVSSGDK--NQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMY 768
F VSS + N++ EAL +G V ++ ++GV VL ++ +F ++ M+
Sbjct: 832 F-VSSTEPSVNKKSIEALYLLGYPVLQS-AISTIIGVCVLSAAKAYIFRTFFKIMF 885
Score = 205 (77.2 bits), Expect = 4.9e-29, Sum P(2) = 4.9e-29
Identities = 95/425 (22%), Positives = 177/425 (41%)
Query: 47 HYTSTESC-MSAFKGPLDPSTALGGFSGNNYS--EASAFVVTYPVNNAVDREGNETKKAV 103
H T T+ ++ F G LG +G + E+ A + Y + D E +E ++
Sbjct: 244 HNTPTQLIYLAGFFG----GNVLGQMTGKSQRLVESRAMRLLYYLKTE-DPEDSE--RSQ 296
Query: 104 AWEKAFVQLAKDELLPMVQSKNLTLAFSSES-SIEEELKRESTADAITIVISYLVMFAYI 162
AW F+ D + + + FSS S +E E ++ + +++FA +
Sbjct: 297 AWLTHFLDHFNDMKSSLTLEEIEVVYFSSLSRQLEFEATSKTVIPLFHLAYILIILFAVV 356
Query: 163 SLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVL 222
S + D I +GV +I+ PFL+L
Sbjct: 357 SCSRLDC-------IRNKMCVAVFGVFSVAMSVVSGFGLMLHLGVPFVIIVANS-PFLIL 408
Query: 223 AVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPAC 282
VGVD+M I++ A ++ L + R+SN+ +V SIT+ +++ VLAF G +
Sbjct: 409 GVGVDDMFIMISAWQKTSLSESIRERLSNSYSKVAVSITITTITNVLAFYTGITSSFRSV 468
Query: 283 RVFSMXXXXXXXXXXXXQITAFVALIVFD---------FLRAEDKRVDCIP---CLKLSS 330
+ F + IT F A++ D +L D++ + C+ S
Sbjct: 469 QYFCIYTGTTLLFCYFYSITCFGAVMALDGKREVAWSRWLEKPDQKYSSLKKSCCVPFGS 528
Query: 331 SYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGL 390
DK P L + ++ L+ K V+ L++ + ++SI C +++ GL
Sbjct: 529 LI---DKHGEDNHPMNL--FFRDYFGPFLTTSKAKFIVVLLYIFYIISSIYGCFQVQEGL 583
Query: 391 EQKIVLPRDSYLQGYFNNISEHLR-IGPPLYFVV-KNYNY-SSESRQTNQLCSISQCDSN 447
+ + + DSY+ YFN ++ GP + +V ++ NY ++ RQ C ++Q + N
Sbjct: 584 DLRNLASDDSYITPYFNVEEDYFSDYGPRVMVIVTESVNYWDNDVRQKLDKC-MTQFEEN 642
Query: 448 SLLNE 452
+++
Sbjct: 643 EYVDK 647
>UNIPROTKB|F1MMY0 [details] [associations]
symbol:PTCHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:DAAA02058443 IPI:IPI00685505 Ensembl:ENSBTAT00000008189
OMA:DECEADI Uniprot:F1MMY0
Length = 931
Score = 211 (79.3 bits), Expect = 6.5e-29, Sum P(2) = 6.5e-29
Identities = 88/378 (23%), Positives = 163/378 (43%)
Query: 95 EGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIV-- 152
EG E +++ AW F+ + L + K + + + S S+ +L+ E+T+ + +
Sbjct: 310 EGEENERSKAWMIHFL-MKVGSLEESLALKKIQVVYFS--SLSRQLEFEATSMTVVPLFH 366
Query: 153 ISYL--VMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKST 210
++YL ++FA +S D + ++ +GV
Sbjct: 367 LAYLLIILFAIVSCYRCDCVR-NKMWVAVFGVISTALAVVSGFGLMLY------VGVPFV 419
Query: 211 LIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLA 270
LI+ PFL+L VGVD+M I++ A ++ L + R+S+ +V SIT+ +++ VLA
Sbjct: 420 LIVANS-PFLILGVGVDDMFIMISAWQKTSLTDSISERMSDVYSKVAVSITITTVTNVLA 478
Query: 271 FAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRA----------EDKRV 320
F G + + F + IT F A + D R E
Sbjct: 479 FYTGIMTSFRSVQYFCIYTGTTLLFCYFYSITCFGACMALDGKREGVCLRWLKKPETPNQ 538
Query: 321 DCIPCLKLSSSYADS---DKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTL 377
+C LK S S D+ P L + ++ L+ KI V+ L+ ++ +
Sbjct: 539 EC-SSLKKSCCLPGSSLQDECEADIHPMNL--FFRDYFGPFLTSTKAKICVVLLYASYII 595
Query: 378 ASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRI-GPPLYFVVKN-YNY-SSESRQ 434
S+ C R+E GL+ + + DSY+ YFN EH GP + ++ +Y ++RQ
Sbjct: 596 TSLYGCFRVEEGLDLRNLASDDSYITPYFNVEEEHFSTYGPRVMVIITEALDYWDKDARQ 655
Query: 435 TNQLCSISQCDSNSLLNE 452
+ C ++ +++ ++E
Sbjct: 656 KLEKC-LADFENSEYVDE 672
Score = 200 (75.5 bits), Expect = 6.5e-29, Sum P(2) = 6.5e-29
Identities = 45/164 (27%), Positives = 91/164 (55%)
Query: 611 VSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITT----CSFWSSAI 666
+++ ++ + Y+ ++YF+Q+ I + N+ +A A+F+V L+ CS W
Sbjct: 753 MAEKCEVPLMVYNSAFIYFDQFSAIVENTVRNVIVASAAMFIVSLLLIPHPLCSLW---- 808
Query: 667 ILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDK--NQ 724
+ + ++V + G MA + L+++S++NLV+ +G + +F HI++AF VSS + N+
Sbjct: 809 VTFAIASVIVGVTGFMAFWNVNLDSISMINLVICIGFSFDFSAHISYAF-VSSSEPSGNR 867
Query: 725 RMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMY 768
+ EAL +G V T ++GV VL ++ +F ++ M+
Sbjct: 868 KAIEALYLLGYPVLQSAVST-IIGVCVLSAAKAYIFRTFFKIMF 910
>UNIPROTKB|K7ERW2 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR003392
Pfam:PF02460 HGNC:HGNC:7897 EMBL:AC026634 EMBL:AC010853
Ensembl:ENST00000591107 Uniprot:K7ERW2
Length = 179
Score = 323 (118.8 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 61/121 (50%), Positives = 91/121 (75%)
Query: 650 VFVVCLITT-CSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFC 708
+F+V ++ C WS+ I+ + M++V++ GVM + I LNAVS+VNLVM+ GI+VEFC
Sbjct: 2 IFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFC 61
Query: 709 VHITHAFSVS-SGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQM 767
HIT AF+VS G + +R +EAL MG+SVFSGITLTK G++VL F+++++F ++YF+M
Sbjct: 62 SHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRM 121
Query: 768 Y 768
Y
Sbjct: 122 Y 122
>WB|WBGene00004208 [details] [associations]
symbol:ptc-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0005887 "integral to
plasma membrane" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0005887
GO:GO:0051301 GO:GO:0007067 GO:GO:0002119 GO:GO:0018996
GO:GO:0040011 GO:GO:0019915 GO:GO:0008158
GeneTree:ENSGT00680000099777 EMBL:Z46812 PIR:T27969
RefSeq:NP_495662.2 ProteinModelPortal:Q09614 STRING:Q09614
PaxDb:Q09614 EnsemblMetazoa:ZK675.1.1 EnsemblMetazoa:ZK675.1.2
GeneID:174274 KEGG:cel:CELE_ZK675.1 UCSC:ZK675.1.1 CTD:174274
WormBase:ZK675.1 eggNOG:NOG313603 HOGENOM:HOG000016673
InParanoid:Q09614 KO:K06225 OMA:CQFNYTI NextBio:883327
GermOnline:ZK675.1 Uniprot:Q09614
Length = 1408
Score = 241 (89.9 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 60/181 (33%), Positives = 102/181 (56%)
Query: 587 YHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 646
Y T L V++++ R R +D + FP + + ++EQYL + T + AI+
Sbjct: 1132 YLTGLTDTAVIVDAIKDIRSVCERFTDQ-GLPNFPQGIAFTFWEQYLFL--TGNLMQAIS 1188
Query: 647 IGAVFVVCLITTCSF--WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIA 704
I + V C+I+ F W++ +++ +L ++ +L G M ++ I+LN VS V L+ AVGI
Sbjct: 1189 IITISVFCVISVLLFNPWAALMVVCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIG 1248
Query: 705 VEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYY 764
VEF VH+ +F + G ++QR A+ + V G + + L+G+++L FS E FVV Y
Sbjct: 1249 VEFTVHVVVSFLTALGTRSQRTSSAVDRVFVPVIHG-SFSTLLGILMLGFSEFE-FVVKY 1306
Query: 765 F 765
F
Sbjct: 1307 F 1307
Score = 156 (60.0 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 206 GVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPL-ETRISNALVEVGPSITLAS 264
G++ +++PFL L +GVDNM +L+H R ++L ++ + E G SI S
Sbjct: 712 GIEFNAATTQIVPFLTLGIGVDNMFMLLHNY-RDVVKLAGGHAEMAILMRETGMSILCTS 770
Query: 265 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIP 324
++ +L+F G+ +P+PA R F +T + A+I D R + +R D +
Sbjct: 771 INNILSFLTGTLLPIPALRSFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDLVC 830
Query: 325 CL 326
CL
Sbjct: 831 CL 832
Score = 49 (22.3 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 344 PGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQ 403
P L +++ + +S K+A+I A AS + GLE VLP +
Sbjct: 883 PWSLHSFIRYYYIPFISKPASKVAIIVGCCALLGASFIGMRQSTLGLELGDVLPEHTAPA 942
Query: 404 GYFNNISEHLRIGPPLYFVVK--NYNYSSESRQ 434
+ ++ P ++ V+K N +Y+ + RQ
Sbjct: 943 QFLRARDKYFSFYP-MFAVIKGPNIDYAHQQRQ 974
Score = 43 (20.2 bits), Expect = 4.9e-27, Sum P(4) = 4.9e-27
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 3 SLTDICMKPLGQDCATQS 20
SL+DIC KP A S
Sbjct: 250 SLSDICFKPAPPSVAADS 267
>WB|WBGene00004209 [details] [associations]
symbol:ptc-2 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0040011 GO:GO:0019915 GO:GO:0008158 EMBL:FO080717
GeneTree:ENSGT00680000099777 KO:K06225 PIR:T16126
RefSeq:NP_495218.2 UniGene:Cel.32852 ProteinModelPortal:Q09540
SMR:Q09540 PaxDb:Q09540 EnsemblMetazoa:F21H12.4 GeneID:191745
KEGG:cel:CELE_F21H12.4 UCSC:F21H12.4 CTD:191745 WormBase:F21H12.4
eggNOG:NOG244490 InParanoid:Q09540 OMA:ANDNHAC NextBio:950188
Uniprot:Q09540
Length = 667
Score = 222 (83.2 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 54/171 (31%), Positives = 96/171 (56%)
Query: 587 YHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 646
Y T L V++++ R R +D + FP + + ++EQYL + T + AI+
Sbjct: 500 YLTGLTDTAVIVDAIKDIRSVCERFTDQ-GLPNFPQGIAFTFWEQYLFL--TGNLMQAIS 556
Query: 647 IGAVFVVCLITTCSF--WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIA 704
I + V C+I+ F W++ +++ +L ++ +L G M ++ I+LN VS V L+ AVGI
Sbjct: 557 IITISVFCVISVLLFNPWAALMVVCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIG 616
Query: 705 VEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFS 755
VEF VH+ +F + G ++QR A+ + V G + + L+G+++L FS
Sbjct: 617 VEFTVHVVVSFLTALGTRSQRTSSAVDRVFVPVIHG-SFSTLLGILMLGFS 666
Score = 163 (62.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 61/242 (25%), Positives = 107/242 (44%)
Query: 206 GVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPL-ETRISNALVEVGPSITLAS 264
G++ +++PFL L +GVDNM +L+H R ++L ++ + E G SI S
Sbjct: 165 GIEFNAATTQIVPFLTLGIGVDNMFMLLHNY-RDVVKLAGGHAEMAILMRETGMSILCTS 223
Query: 265 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIP 324
++ +L+F G+ +P+PA R F +T + A+I D R + +R D
Sbjct: 224 INNILSFLTGTLLPIPALRSFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDFDT 283
Query: 325 CLKLSS--SYADSDKGIGQRK--------PGLLARYMKEVHATILSLWGVKIAVISLFVA 374
+ +S S GI Q + P L +++ + +S K+A+I A
Sbjct: 284 REESTSEASIMQQFDGITQAQMASSDDPAPWSLHSFIRYYYIPFISKPASKVAIIVGCCA 343
Query: 375 FTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVK--NYNYSSES 432
AS + GLE VLP + + ++ P ++ V+K N +Y+ +
Sbjct: 344 LLGASFVGMRQSTLGLELGDVLPEHTAPAQFLRARDKYFSFYP-MFAVIKGPNIDYAHQQ 402
Query: 433 RQ 434
RQ
Sbjct: 403 RQ 404
>WB|WBGene00004233 [details] [associations]
symbol:ptr-19 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099845 EMBL:AL021482 GeneID:191751
KEGG:cel:CELE_Y39A1B.2 CTD:191751 PIR:T26746 RefSeq:NP_001255085.1
ProteinModelPortal:Q9XXR9 EnsemblMetazoa:Y39A1B.2a UCSC:Y39A1B.2
WormBase:Y39A1B.2a HOGENOM:HOG000021284 InParanoid:Q9XXR9
OMA:ANQSRAM NextBio:950212 ArrayExpress:Q9XXR9 Uniprot:Q9XXR9
Length = 1003
Score = 200 (75.5 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 56/190 (29%), Positives = 96/190 (50%)
Query: 217 IPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSF 276
+PF+V +VGVDN+ IL+ A + LE R+ + SIT+ SL+++++F VG
Sbjct: 357 MPFIVFSVGVDNVFILLSAWRSTSSTETLEHRMKETFADAAVSITVTSLTDLISFGVGCA 416
Query: 277 IPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSS-SYADS 335
P P+ ++F Q+T F A++V+ R + R CI KL + +
Sbjct: 417 TPFPSVQMFCAYAVAAVIFTYIYQLTFFAAVMVYTNRREINNR-HCIFFHKLKKDTLPEK 475
Query: 336 DKGIGQR---KPGLLARYMKEVHATILSLWGVKIAVISLFVAFT-LASIALCTRIEPGLE 391
G R K +LA++ + ++ L V+I ++ F + +AS CT+++ GLE
Sbjct: 476 IAAQGDRSFEKNTILAQFFRTTYSDFLLNPLVRIVILVTFCVYLGVASYG-CTKVKLGLE 534
Query: 392 QKIVLPRDSY 401
+LP +SY
Sbjct: 535 PNDLLPENSY 544
Score = 189 (71.6 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 47/169 (27%), Positives = 89/169 (52%)
Query: 593 RQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFV 652
R + N RA R F R++++ +++ Y+ F+ + EQY + L ++A A AV
Sbjct: 663 RHVGSANQSRAMRLFR-RLAETSELQTGVYADFFQFAEQYNAVLPGTLSSIAYAGVAVVA 721
Query: 653 VCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHIT 712
V LI +S + + I + ++G M ++L+ +S+V +VM++G V+F H+
Sbjct: 722 VSLILIPEPVASLWVSFSIVSINIGILGFMTFWSVRLDFISMVTIVMSIGFCVDFAAHLA 781
Query: 713 HAFSVSSG-DKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVF 760
+ F+ D ++RM+ AL +GA + T T ++GV + + + VF
Sbjct: 782 YNFAKGQNMDGSERMRNALYAVGAPILMSATST-IIGVSFMASAESYVF 829
Score = 39 (18.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 233 VHAVKRQQLELPLETRISNALVEV 256
+H++ + P E +SN LVE+
Sbjct: 157 LHSLFAPNMTTPEEICVSNPLVEI 180
Score = 38 (18.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 201 FFSAIGVKSTLIIMEVIPFLVLAVGVD---NMCILVH--AVKRQQLEL 243
F A G S +++ PF ++ + + + +L H A + +LEL
Sbjct: 10 FAHAFGAYSGVVVRHPFPFFIIPILITAGLSTGLLRHEQAFMKDELEL 57
>WB|WBGene00004217 [details] [associations]
symbol:ptr-2 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0045138 "tail tip morphogenesis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR001036 InterPro:IPR003392
Pfam:PF02460 PRINTS:PR00702 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0048477
GO:GO:0005215 GO:GO:0000910 GO:GO:0045138 GO:GO:0008158
GO:GO:0001703 eggNOG:NOG149152 EMBL:FO080749
GeneTree:ENSGT00680000099845 OMA:HERMGEC PIR:T25600
RefSeq:NP_491221.1 ProteinModelPortal:P91129 SMR:P91129
DIP:DIP-27136N MINT:MINT-1099898 STRING:P91129 PaxDb:P91129
EnsemblMetazoa:C32E8.8 GeneID:171950 KEGG:cel:CELE_C32E8.8
UCSC:C32E8.8 CTD:171950 WormBase:C32E8.8 HOGENOM:HOG000020462
InParanoid:P91129 NextBio:873377 Uniprot:P91129
Length = 933
Score = 218 (81.8 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 79/320 (24%), Positives = 141/320 (44%)
Query: 126 LTLAFSSESSIEEELKR--ESTADAITIVISYLVMFAYI-SLTLGDTPHLSSFYIXXXXX 182
+++ + ++ +ELKR ++ I I+ L++F+ + SL+ D S ++
Sbjct: 243 ISITYFHSQTLADELKRNADTLIPRFIISITLLIVFSTLCSLSFIDGS-FSIDWVLSKPI 301
Query: 183 XXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLE 242
F S +G+ I+ V+PFLVLAVGVDNM ++V AV+R
Sbjct: 302 LSILGVVSAGIAILTGVGFLSLMGMPYNDIV-GVMPFLVLAVGVDNMFLMVAAVRRTSRT 360
Query: 243 LPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQIT 302
+ R+ L + SI + S ++VL+F VG+ +PA ++F + QIT
Sbjct: 361 HTVHERMGECLADAAVSILITSSTDVLSFGVGAITTIPAVQIFCVYTGVAIFFAFIYQIT 420
Query: 303 AFVALIVFDFLRAEDKR-----VDCIPCLKLSS-----------SYADSDKGIGQRKPGL 346
F A + R ++ + K +S S D ++P L
Sbjct: 421 FFAACLALAMKHEASGRNSLFLIEAVSAEKKTSLSTFQRLFNLGSVPDHSASHDVKQP-L 479
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYF 406
+R+ E +A +L V+ + FV + L + C+RI+ GLE +L DSY ++
Sbjct: 480 TSRFFGEWYAPVLMHPVVRGIAMVWFVIYLLGASYGCSRIKEGLEPVNLLVEDSYAIPHY 539
Query: 407 NNISEHL-RIGPPLYFVVKN 425
+ ++ + G + V+ N
Sbjct: 540 RLLEKYFWKYGQQVQIVINN 559
Score = 164 (62.8 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 46/196 (23%), Positives = 98/196 (50%)
Query: 575 ENG-IVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYL 633
+NG +V++ F L +D ++ + RE ++R + + + +M+ +QY+
Sbjct: 644 DNGTMVKSFRFILGMKDLVTTMDQTDATMSFREVAARWPE---FNVTTFMPIWMFTDQYI 700
Query: 634 DIWRTALINLAIAIGAVFVVCLI----TTCSFWSSAIILLVLTMIVVDLMGVMAILKIQL 689
I + N+ IA+ + V+ ++ CS W + L I ++G M + + L
Sbjct: 701 IIIPNTVQNIIIALLVMIVIAVLFIPQPMCSLW----VALACASIDFGVIGYMTLWGVNL 756
Query: 690 NAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQ-RMKEALGTMGASVFSGITLTKLVG 748
+A+S++ ++M++G +V++ HI + + VS D R+KEAL +G + G ++ ++
Sbjct: 757 DAISMITIIMSIGFSVDYSAHIAYGYVVSREDTAAGRVKEALSALGWPLSQG-AMSTIIA 815
Query: 749 VIVLCFSRTEVFVVYY 764
V VL + V ++
Sbjct: 816 VSVLADIPAYMIVTFF 831
>WB|WBGene00004210 [details] [associations]
symbol:ptc-3 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0016324 "apical plasma membrane" evidence=IDA]
[GO:0031410 "cytoplasmic vesicle" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0016324
GO:GO:0018996 GO:GO:0031410 GO:GO:0040011 GO:GO:0040018
GO:GO:0008158 GeneTree:ENSGT00680000099777 EMBL:FO081635
UniGene:Cel.5929 GeneID:173631 KEGG:cel:CELE_Y110A2AL.8 CTD:173631
RefSeq:NP_001122650.1 ProteinModelPortal:H2L0G5
EnsemblMetazoa:Y110A2AL.8c WormBase:Y110A2AL.8c OMA:MNPISAV
Uniprot:H2L0G5
Length = 1367
Score = 228 (85.3 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 55/174 (31%), Positives = 96/174 (55%)
Query: 595 IDYVNSMRAA-REFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVV 653
+ + +RA E+S R + P + + ++EQYL + R L AI I A+ V
Sbjct: 1104 VKMIEEIRATCEEYSER-----GLSNHPSGIAFTFWEQYLTL-RWNLFQ-AICIIALAVF 1156
Query: 654 CLITTCSF--WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHI 711
C+I+ F W++ +I+ ++ + ++L G M ++ I++N +S V L+ AVGI VEF H+
Sbjct: 1157 CVISILMFNPWAATLIMCIVVITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHV 1216
Query: 712 THAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYF 765
AF + G +QR++ L M V+ G ++ +GV++L FS + V Y+F
Sbjct: 1217 ELAFLTALGTIDQRLESCLQHMFVPVYHG-AISTFLGVVMLVFSEFDFVVTYFF 1269
Score = 161 (61.7 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 50/206 (24%), Positives = 86/206 (41%)
Query: 132 SESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXX 191
+ +SI + L+ S + I IVI Y++M Y + T G +++
Sbjct: 612 ASTSIADMLEEFSQFNYIIIVIGYILMVIYAAFTQG---RFQGWWLAVQSNVALAICGVI 668
Query: 192 XXXXXXX--XXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRI 249
F + +G+ +V+PFL L +G+D+M +L+H + + + + I
Sbjct: 669 LVTISSICGLGFATHLGINFNAATTQVVPFLSLGLGIDDMFLLLHNYD-EIINICNKNEI 727
Query: 250 SNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIV 309
L E G S+ L S++ +LAF G +P+PA R F + F A+I
Sbjct: 728 GVLLKETGMSVMLTSINNILAFISGYVLPIPALRSFCSQTAILLAFNLIFLMFIFPAMIG 787
Query: 310 FDFLRAEDKRVDCIPCLKLSSSYADS 335
D R + D C + + A S
Sbjct: 788 IDLRRQRKGKRDLAYCSRGNPQMATS 813
Score = 40 (19.1 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 3 SLTDICMKPLG 13
+L+DIC KP G
Sbjct: 239 TLSDICFKPPG 249
>WB|WBGene00004224 [details] [associations]
symbol:ptr-10 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 EMBL:FO081477 HOGENOM:HOG000020462
PIR:T29590 RefSeq:NP_491658.2 ProteinModelPortal:P91346
EnsemblMetazoa:F55F8.1.1 EnsemblMetazoa:F55F8.1.2 GeneID:172229
KEGG:cel:CELE_F55F8.1 UCSC:F55F8.1.1 CTD:172229 WormBase:F55F8.1
InParanoid:P91346 OMA:HGINITY NextBio:874595 Uniprot:P91346
Length = 900
Score = 186 (70.5 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 63/269 (23%), Positives = 123/269 (45%)
Query: 70 GFSGNNYS-EASAFVVTYPVNNAVDREGNETKKAVA-WEKAFVQLAKDELLPMVQSKNLT 127
G +G N EA+A+++ Y + NE WE+ F DE Q+K ++
Sbjct: 195 GDNGENIIVEATAWLLIYQLKFYP----NEISYVSGLWEREFKN-KMDEYKK--QAKYIS 247
Query: 128 LAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSF--YIXXXXXXXX 185
+ + ++ +EL R + A + +++++ + L T S + ++
Sbjct: 248 ITYFHSQTLSDELNRNAERLAPKFIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPILSV 307
Query: 186 XXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPL 245
+ + ++ II V+PFLV+AVG DNM ++V ++KR L
Sbjct: 308 LGVSNAGMGIASAMGMLTYLEIQYNDIIA-VMPFLVVAVGTDNMFLMVASLKRTDRNLKY 366
Query: 246 ETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFV 305
+ RI+ + + SI + +L++ L+F VG+ +PA ++F + Q+T F
Sbjct: 367 DQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTFFC 426
Query: 306 ALIVFDFLRAEDKRVDCI---PCLKLSSS 331
A++V+ + R E++ + I P + SS+
Sbjct: 427 AILVY-YTRIEEQGLHSIWLRPAVTYSST 454
Score = 170 (64.9 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 40/165 (24%), Positives = 87/165 (52%)
Query: 605 REFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLIT----TCS 660
RE +SR Q + Y +++ +QY + + ++ +A+ + V+ + CS
Sbjct: 696 REIASRFE---QYNVTTYMPLWLFTDQYALVVPNTMQDIIVAVACMLVISALLIPQPVCS 752
Query: 661 FWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSS- 719
FW + + + I + ++G M + + L+A+S++ ++M+VG +V++ HIT+A+ +S
Sbjct: 753 FW----VAVTIGSIDLGVLGFMTLWNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKE 808
Query: 720 GDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYY 764
+ R+ +ALG +G V G ++ ++ V VL + V ++
Sbjct: 809 STTSARVCDALGDLGWPVAQG-AMSTILAVSVLSDVPAYMIVTFF 852
Score = 68 (29.0 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 350 YMKEVHATILSLWGVKIAVISLFVAFTLA-SIALCTRIEPGLEQKIVLPRDSYLQGYFNN 408
+ + +A +L ++ A+ L+ L SI CT ++ GLE +L DSY ++
Sbjct: 507 FFRNWYAPVLMQPWIR-AIAGLWYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRV 565
Query: 409 ISEHL-RIGPPLYFVVKN 425
+ +H G L VV N
Sbjct: 566 LEKHYWHYGASLQIVVSN 583
>FB|FBgn0262867 [details] [associations]
symbol:Ptr "Patched-related" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0004872 "receptor activity" evidence=NAS] [GO:0010004
"gastrulation involving germ band extension" evidence=IMP]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0016328
"lateral plasma membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 EMBL:AE013599 GO:GO:0016021 GO:GO:0004872
GO:GO:0008158 eggNOG:NOG149152 GeneTree:ENSGT00680000099845
EMBL:BT003500 RefSeq:NP_001246145.1 RefSeq:NP_001246146.1
RefSeq:NP_610209.2 UniGene:Dm.17870 IntAct:Q86P36 STRING:Q86P36
EnsemblMetazoa:FBtr0086003 EnsemblMetazoa:FBtr0307500
EnsemblMetazoa:FBtr0307501 GeneID:35546 KEGG:dme:Dmel_CG11212
UCSC:CG11212-RA CTD:19284 FlyBase:FBgn0262867 InParanoid:Q86P36
OMA:PGYFIII OrthoDB:EOG4KD51X ChiTaRS:PTCHD3 GenomeRNAi:35546
NextBio:793966 Uniprot:Q86P36
Length = 1169
Score = 193 (73.0 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 55/197 (27%), Positives = 99/197 (50%)
Query: 605 REFSSRVSDS-LQMEIF-PYSVFYMYFEQYLDIWRTALINLAIAIGAV-FVVCLITTCSF 661
R+ DS L IF PY VF+ FE + A++ AI + + FV CS
Sbjct: 673 RDLRQICKDSPLNASIFHPYFVFFDQFELVRPVSLQAMVIGAIIMMIISFVFIPNILCSL 732
Query: 662 WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAF-SVSSG 720
W + V++ I + + G MA+ + L+++S++NL+M +G +V+F HI + + S
Sbjct: 733 W---VAFSVIS-IELGVAGYMALWDVNLDSISMINLIMCIGFSVDFTAHICYTYMSSKKR 788
Query: 721 DKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYXXXXXXXXXXXX 780
R++EAL ++G + G + T ++G++ L +++ +F+V+ F+M
Sbjct: 789 SPKARVREALHSLGLPIIQGSSST-ILGIVALLLAQSYIFLVF-FKMVFLVIFFGAMHGL 846
Query: 781 XXXXXXXSVFGPPSRCM 797
S+FGP S C+
Sbjct: 847 FLLPVLLSLFGPGS-CL 862
Score = 146 (56.5 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 55/274 (20%), Positives = 114/274 (41%)
Query: 71 FSGNNYSEASAFVVTYPVNNAVDREGNETK----KAVAWEKAFVQLAKDELLPMVQSKNL 126
F G +E + +V++ P V +TK K WE+ F+++ + Q K++
Sbjct: 192 FGGTKLTEDN-YVISVPAIQLVYFVTADTKRQDAKGAEWEETFLRVVGNAE-NSGQFKHI 249
Query: 127 TLAFSSESSIEEELKRESTADAITIVISYLVM--FAYISLTLGDTPHLSSFYIXXXXXXX 184
++++ + +++ EL++ + ++L+M F+ I+ +GD F
Sbjct: 250 SVSYFASRTLDHELEKNTKTVVPYFSSTFLLMGLFSIITCMMGDAVRSKPFLGLMGNVSA 309
Query: 185 XXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELP 244
F I + + PFL++ +G+D+ +++ +R + ++P
Sbjct: 310 IMATLAAFGLAMYCGIEFIGINLAA--------PFLMIGIGIDDTFVMLAGWRRTKAKMP 361
Query: 245 LETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAF 304
+ R+ + E SIT+ S+++ ++F +G P + R+F IT F
Sbjct: 362 VAERMGLMMSEAAVSITITSVTDFISFLIGIISPFRSVRIFCTYSVFAVCFTFLWHITFF 421
Query: 305 VALIVFDFLRAEDKRVDCI-PCLKLSSSYADSDK 337
A + R E K + I C S A +K
Sbjct: 422 AACMAISGYR-ERKNLHSIFGCRVQPMSVAIKEK 454
Score = 82 (33.9 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 334 DSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK 393
D D I + L+A + ++ A I + W K +I F ++ + + T+I+ GLE++
Sbjct: 471 DPDNPIDNKDHMLMAFFKDKMAAVINNKW-CKAIIILAFASYLVGACYGITQIKEGLERR 529
Query: 394 IVLPRDSYLQGYFNNISEHLRIGP-PLYFVVKN-YNYSSESRQTNQLCSISQCDSNSLLN 451
+ DSY +F+ ++ R P + ++ NYS Q Q ++ L +
Sbjct: 530 KLSREDSYSVEFFDREDDYYREFPYRMQVIIAGPLNYSDPLVQ-------EQVEN--LTS 580
Query: 452 EISRASLIPQSSYIAKPAASWLDDFLVWI 480
+ S + Y SWL FL ++
Sbjct: 581 TLEHTSYVTSRRY----TESWLRSFLSFL 605
Score = 39 (18.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 342 RKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIAL 382
R L A + + I+S + + SL+VAF++ SI L
Sbjct: 703 RPVSLQAMVIGAIIMMIISFVFIPNILCSLWVAFSVISIEL 743
>WB|WBGene00004216 [details] [associations]
symbol:ptr-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996
GO:GO:0040011 GO:GO:0040018 GO:GO:0045138 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080128 PIR:A89153
RefSeq:NP_505380.1 ProteinModelPortal:Q18129 STRING:Q18129
PaxDb:Q18129 EnsemblMetazoa:C24B5.3 GeneID:191746
KEGG:cel:CELE_C24B5.3 UCSC:C24B5.3 CTD:191746 WormBase:C24B5.3
eggNOG:NOG246851 HOGENOM:HOG000018323 InParanoid:Q18129 OMA:LNDHITM
NextBio:950192 Uniprot:Q18129
Length = 956
Score = 197 (74.4 bits), Expect = 7.1e-23, Sum P(4) = 7.1e-23
Identities = 46/180 (25%), Positives = 92/180 (51%)
Query: 585 RTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLA 644
R Y TP D+ +S + R + + S + + +Y + +QYL++ + N+
Sbjct: 728 RNYRTPT----DHTHSCKLMRSIADKYS---MFNVTTFHEYYPFADQYLELTPSLFQNMI 780
Query: 645 IAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIA 704
+ +F V + + I+L + I V ++G M+ + L++VS++ ++M +G +
Sbjct: 781 SDLCTIFAVSWVMIPELICAVAIVLSIASINVGVLGFMSFWGVNLDSVSIITVIMCIGFS 840
Query: 705 VEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYY 764
V+ HI +AFS S G+ + R AL T+G VF G + T L G+++L + + +++
Sbjct: 841 VDLSAHIAYAFSQSYGNSHARAVAALETLGWPVFLGASSTVL-GILLLTLVDSYIVQIFF 899
Score = 124 (48.7 bits), Expect = 7.1e-23, Sum P(4) = 7.1e-23
Identities = 47/214 (21%), Positives = 85/214 (39%)
Query: 75 NYSEASAFVVTYPVNNA-VDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSE 133
++ ASA +TY VD+ G E ++ ++ + ELL + N+TL +
Sbjct: 221 HFDYASAIRLTYNTREGKVDQYGIEWRRKLSMWLTDKENPVSELLEFGVNHNMTLPEGLQ 280
Query: 134 SSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXX 193
+ + AI S+LV + L T + ++
Sbjct: 281 DVADTLAPKFVGTCAILFTFSFLVS---VVLRKHRTGQVMPDWVRSKPLVAAAGLMTPIM 337
Query: 194 XXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNAL 253
G I+ V PFL+L +G+D++ I+ R + E RI L
Sbjct: 338 ATVTSFGLILWCGFLYNAIV-NVSPFLILCIGIDDLFIMCAEWHRTNPQHSPEKRIGKTL 396
Query: 254 VEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
E +I++ SL+++ FA+G + +P ++F M
Sbjct: 397 SEAAVAISITSLTDIATFAMGCYTTLPGVQMFCM 430
Score = 81 (33.6 bits), Expect = 7.1e-23, Sum P(4) = 7.1e-23
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 334 DSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQK 393
D D G + L+++ +E+ + ++ + L++ + +I C I+ GL+ K
Sbjct: 532 DDDPGHNSEET-LVSKVFREIIGPFILQKSTQVCALLLYLVYISLAIGGCLNIKEGLDPK 590
Query: 394 IVLPRDSYLQGYFNNISEHL-RIGPPLYFVVKN 425
+++ YL ++ I E R G + VV N
Sbjct: 591 LLVRESFYLSKFYEIIDETFWREGLQMQVVVNN 623
Score = 41 (19.5 bits), Expect = 7.1e-23, Sum P(4) = 7.1e-23
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 62 LDPSTALGGFSGNNYSEASAFVVTYPVN 89
L P T G FSG ++E ++ ++ VN
Sbjct: 165 LMPKTRWGNFSGP-FAELASDIINTQVN 191
Score = 39 (18.8 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 131 SSESSIEEELKRESTADAI----TIVISYLVMFAYISLTLG 167
+SE ++ ++ RE I T V + L+ YISL +G
Sbjct: 538 NSEETLVSKVFREIIGPFILQKSTQVCALLLYLVYISLAIG 578
>UNIPROTKB|F1MVV4 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] InterPro:IPR003392 Pfam:PF02460
GO:GO:0016020 GO:GO:0008158 GeneTree:ENSGT00680000099777
EMBL:DAAA02024005 IPI:IPI00694886 Ensembl:ENSBTAT00000013074
OMA:LATEFQE Uniprot:F1MVV4
Length = 584
Score = 272 (100.8 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 61/184 (33%), Positives = 107/184 (58%)
Query: 579 VQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT 638
++ + F Y L D+V ++ R + + SL + +P ++++EQY+ +
Sbjct: 404 IEYAQFPFYLNGLRDTSDFVEAIEKVRTICNNYT-SLGLSSYPNGYPFLFWEQYIGLRHW 462
Query: 639 ALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV 698
L+++++ + F+VC + + W++ II+ VL ++ V+L G+M ++ I+L+AV VV L+
Sbjct: 463 LLLSISVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAVPVVILI 522
Query: 699 MAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 758
+VGI VEF VH+ AF + GDKN+R AL M A V G T L+GV++L S +
Sbjct: 523 ASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVST-LLGVLMLAGSEFD 581
Query: 759 VFVV 762
F+V
Sbjct: 582 -FIV 584
Score = 60 (26.2 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 347 LARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS 400
L+ + ++ +A L K+ VI LF+ S+ TR+ GL+ ++PR++
Sbjct: 167 LSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 220
Score = 49 (22.3 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 304 FVALIVFDFLRAEDKRVDCIPC 325
F A++ D R ED+R+D C
Sbjct: 27 FPAILSMDLYRREDRRLDIFCC 48
>WB|WBGene00004231 [details] [associations]
symbol:ptr-17 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0008158 EMBL:AL034393
GeneTree:ENSGT00680000099845 RefSeq:NP_001021732.1
UniGene:Cel.18390 ProteinModelPortal:Q5DTE5
EnsemblMetazoa:Y18D10A.7c GeneID:173150 KEGG:cel:CELE_Y18D10A.7
UCSC:Y18D10A.7c CTD:173150 WormBase:Y18D10A.7c eggNOG:NOG296440
HOGENOM:HOG000137660 InParanoid:Q5DTE5 OMA:CAIISST NextBio:878477
Uniprot:Q5DTE5
Length = 936
Score = 160 (61.4 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 57/210 (27%), Positives = 98/210 (46%)
Query: 573 GYENGIVQASSFRTYHTPLNRQID--YVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFE 630
GY+ ++ FR N + D N R R+ S + ++ I YS + +
Sbjct: 700 GYD--VLSDKQFRLSTRLKNVETDEEMFNCARTMRKLSQKHAN---YSIITYSPLWNIAD 754
Query: 631 QYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLN 690
+Y +W + ++ I+I + V L+ S II L + I ++G M+ L + L+
Sbjct: 755 EYDIMWPQTMQDIYISIAVMVPVALLFIPQPLCSVIIGLNIASIAFGVIGTMSFLGVSLD 814
Query: 691 AVSVVNLVMAVGIAVEFCVHITHAFSVSSG----DKN---QRMKEALGTMG-------AS 736
A S++ + M+VG +V+F H+++A+ SG K+ R LGT+G S
Sbjct: 815 ATSMITVAMSVGFSVDFAAHVSYAYMTESGAQIPGKSAIYSRFCHTLGTIGWPVTQASVS 874
Query: 737 VFSGITLTKLVG--VIVLCFSRTEVFVVYY 764
V G++ LV V+ CF RT V V+ +
Sbjct: 875 VLLGVSSLYLVDSYVVQTCF-RTVVLVILF 903
Score = 157 (60.3 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 216 VIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGS 275
V+PFL L +G+D+ +++ A LP E RI A+ SI++ SL++ LAF +GS
Sbjct: 366 VMPFLSLTIGIDDTFLMLAAWHETDRNLPYEKRIEKAMRHAAVSISITSLTDALAFLIGS 425
Query: 276 FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKR--VDCIPCLKLSSSY 332
P+PA F +T FVA++ R ED + V + + L S Y
Sbjct: 426 IAPLPAVIYFCYYSSAAILFIFLYVLTMFVAVLALQGRREEDLKHSVTGMKTIDLDSDY 484
Score = 65 (27.9 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 61 PLDPSTALGGFS---GNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDEL 117
P+D S LG S + ASA+++ Y + N + + + +A EK A EL
Sbjct: 206 PIDISKVLGNVSLDYDGHVENASAWLILYQLKNEKWQLSRDFEDGLA-EKIQSGEAPSEL 264
Query: 118 LPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYIS 163
L + + T F E +E+E +R + +IT S L++FA ++
Sbjct: 265 LNLYYFHSAT--FDQE--LEKENRRLTPKFSITF--SVLIIFAIMT 304
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 152 VISYLVMFAYISLTLGDTPHL 172
++S+L+ AY++ HL
Sbjct: 548 ILSFLIYLAYLAAAFYGVKHL 568
>WB|WBGene00004229 [details] [associations]
symbol:ptr-15 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:FO080767 PIR:T33217 RefSeq:NP_504760.1
ProteinModelPortal:O61894 SMR:O61894 STRING:O61894
EnsemblMetazoa:T07H8.6 GeneID:191749 KEGG:cel:CELE_T07H8.6
UCSC:T07H8.6 CTD:191749 WormBase:T07H8.6 eggNOG:NOG301271
HOGENOM:HOG000021530 InParanoid:O61894 OMA:VCTLISM NextBio:950204
Uniprot:O61894
Length = 840
Score = 173 (66.0 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 52/197 (26%), Positives = 94/197 (47%)
Query: 216 VIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGS 275
V+PF+ LA+GVD++ +++ A + + L + R+ AL E G +IT+ SL+ VL+F +G+
Sbjct: 325 VMPFIALAIGVDDVYVMLGAWQDTRRTLDAKKRMGLALEEAGSAITVTSLTSVLSFGIGT 384
Query: 276 FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCI----PCLKLSSS 331
+ PA +F Q+T F A++ R E C+ C + +
Sbjct: 385 YSTTPAIAIFCKFIALAIMFDWFYQLTFFAAVMAMGAKR-EAAGYHCVFVWKRCDREEIA 443
Query: 332 YADSDKGIGQRKPGLLARYMKE-VHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGL 390
A ++ I P RY E + A + V+ +++L+V + + C+++ P L
Sbjct: 444 KAKNENAIS---P---TRYFFENIFAPFICRPSVRFCMLNLYVVYIAIAFYGCSQLTPNL 497
Query: 391 EQKIVLPRDSYLQGYFN 407
++ DS L Y N
Sbjct: 498 TPSQLVVDDSPLVPYLN 514
Score = 147 (56.8 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 40/146 (27%), Positives = 78/146 (53%)
Query: 628 YFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDL--MGVMAIL 685
Y +Q L++ T L +L AI + +C++ S + +V T+I +D+ G++++
Sbjct: 667 YSDQMLELQSTILSSLGTAIILLSAICIMFIAE--SYIVFWVVCTLISMDIGTAGLLSLW 724
Query: 686 KIQLNAVSVVNLVMAVGIAVEFCVHI-THAFSVSSGDKNQRMKEALGTMGASVFSGITLT 744
L+ ++VVN++M++G ++F H+ + D ++R+++A+G +G V T T
Sbjct: 725 GADLDPMTVVNILMSIGQCIDFATHVGIRIYRSEYSDPDERIRDAMGAIGWPVVQAGTST 784
Query: 745 KLVGVIVLC--------FSRTEVFVV 762
L V++L F+RT V VV
Sbjct: 785 LLAIVVMLMVPSSAVRMFARTSVLVV 810
>FB|FBgn0003892 [details] [associations]
symbol:ptc "patched" species:7227 "Drosophila melanogaster"
[GO:0008158 "hedgehog receptor activity" evidence=IMP;TAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS;TAS]
[GO:0007224 "smoothened signaling pathway"
evidence=IGI;NAS;IMP;TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0045169 "fusome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IGI;TAS] [GO:0048099 "anterior/posterior lineage
restriction, imaginal disc" evidence=TAS] [GO:0007350 "blastoderm
segmentation" evidence=NAS] [GO:0001746 "Bolwig's organ
morphogenesis" evidence=IMP] [GO:0030707 "ovarian follicle cell
development" evidence=TAS] [GO:0007422 "peripheral nervous system
development" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0009880 "embryonic pattern specification"
evidence=TAS] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0004888 "transmembrane signaling receptor
activity" evidence=NAS] [GO:0048100 "wing disc anterior/posterior
pattern formation" evidence=TAS] [GO:0007455 "eye-antennal disc
morphogenesis" evidence=IMP] [GO:0016311 "dephosphorylation"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0009952
"anterior/posterior pattern specification" evidence=NAS]
[GO:0048103 "somatic stem cell division" evidence=TAS] [GO:0042078
"germ-line stem cell division" evidence=TAS] [GO:0042306
"regulation of protein import into nucleus" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035225
"determination of genital disc primordium" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0030139
"endocytic vesicle" evidence=IDA] [GO:0055088 "lipid homeostasis"
evidence=IMP] [GO:0030228 "lipoprotein particle receptor activity"
evidence=IDA] [GO:0008406 "gonad development" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 EMBL:AE013599 GO:GO:0007346
GO:GO:0048471 GO:GO:0007411 GO:GO:0005887 GO:GO:0008406
GO:GO:0030707 GO:GO:0006508 GO:GO:0007422 GO:GO:0035225
GO:GO:0055088 GO:GO:0016311 GO:GO:0030139 GO:GO:0007367
GO:GO:0042306 GO:GO:0007476 GO:GO:0009880 GO:GO:0007224
GO:GO:0030228 GO:GO:0001746 GO:GO:0007455 GO:GO:0008158
GO:GO:0048103 GO:GO:0042078 GO:GO:0045879 GO:GO:0048100
HOGENOM:HOG000228313 GO:GO:0048099 GeneTree:ENSGT00680000099777
eggNOG:NOG313603 KO:K06225 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:M28999 EMBL:M28418 EMBL:X17558 PIR:S06119 RefSeq:NP_523661.2
UniGene:Dm.2630 ProteinModelPortal:P18502 DIP:DIP-634N
STRING:P18502 TCDB:2.A.6.6.2 EnsemblMetazoa:FBtr0089427
GeneID:35851 KEGG:dme:Dmel_CG2411 UCSC:CG2411-RA CTD:35851
FlyBase:FBgn0003892 InParanoid:P18502 OrthoDB:EOG4BRV1N
PhylomeDB:P18502 GenomeRNAi:35851 NextBio:795513 Bgee:P18502
GermOnline:CG2411 Uniprot:P18502
Length = 1286
Score = 160 (61.4 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 39/146 (26%), Positives = 82/146 (56%)
Query: 620 FPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLM 679
+P + ++++EQY+ + + + LA + A V+ + S W++ +++L + + +
Sbjct: 937 YPSGIPFIFWEQYMTLRSSLAMILACVLLAALVLVSLLLLSVWAAVLVILSVLASLAQIF 996
Query: 680 GVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFS 739
G M +L I+L+A+ V L+++VG+ + F V I+ F S G++ +R++ ++ +
Sbjct: 997 GAMTLLGIKLSAIPAVILILSVGMMLCFNVLISLGFMTSVGNRQRRVQLSMQMSLGPLVH 1056
Query: 740 GITLTKLVGVIVLCFSRTEVFVVYYF 765
G+ LT V V +L S E FV+ +F
Sbjct: 1057 GM-LTSGVAVFMLSTSPFE-FVIRHF 1080
Score = 146 (56.5 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 51/225 (22%), Positives = 94/225 (41%)
Query: 104 AWEKAFVQLAKDELLPMVQ-SKNLTLAFSSESSIEEELKRESTADAITIVI--SYLVMFA 160
AW++ F + + L + + N + S +++++ L + S A++IVI + V++A
Sbjct: 384 AWQRNFSREVEQLLRKQSRIATNYDIYVFSSAALDDILAKFSHPSALSIVIGVAVTVLYA 443
Query: 161 YISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFL 220
+ +L P + + +G+ +V+PFL
Sbjct: 444 FCTLLRWRDP------VRGQSSVGVAGVLLMCFSTAAGLGLSALLGIVFNAASTQVVPFL 497
Query: 221 VLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMP 280
L +GVD++ +L A +T++ L +VGPSI ++ S +F +FIP+P
Sbjct: 498 ALGLGVDHIFMLTAAYAESNRRE--QTKL--ILKKVGPSILFSACSTAGSFFAAAFIPVP 553
Query: 281 ACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPC 325
A +VF + + F A+I D R R D C
Sbjct: 554 ALKVFCLQAAIVMCSNLAAALLVFPAMISLDLRRRTAGRADIFCC 598
Score = 60 (26.2 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 358 ILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGP 417
++ W VK + F+A ++S+ TR++ GL+ ++P+DS + F + L
Sbjct: 674 LMRSW-VKFLTVMGFLAALISSLYASTRLQDGLDIIDLVPKDSN-EHKFLDAQTRLFGFY 731
Query: 418 PLYFVVK-NYNYSSESR 433
+Y V + N+ Y ++ +
Sbjct: 732 SMYAVTQGNFEYPTQQQ 748
>WB|WBGene00004232 [details] [associations]
symbol:ptr-18 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0018996 GO:GO:0006897 GO:GO:0045138
GO:GO:0040025 GO:GO:0008158 EMBL:AL032639
GeneTree:ENSGT00680000099845 RefSeq:NP_496761.3
ProteinModelPortal:Q9XWL9 STRING:Q9XWL9 PaxDb:Q9XWL9
EnsemblMetazoa:Y38F1A.3 GeneID:174940 KEGG:cel:CELE_Y38F1A.3
UCSC:Y38F1A.3 CTD:174940 WormBase:Y38F1A.3 eggNOG:NOG139119
HOGENOM:HOG000016895 OMA:AVIYDYI Uniprot:Q9XWL9
Length = 895
Score = 188 (71.2 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 61/227 (26%), Positives = 105/227 (46%)
Query: 97 NETKKAVA--WE-KAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NET + WE K F E P+++ + +SE + EE++R + +
Sbjct: 215 NETMYEIMKEWEQKLFAYTLSTENDPLIR-----VYVTSEGLVSEEVRRTGILAMPLMGV 269
Query: 154 SYLVMFAYISLT-LGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLI 212
++L++ A+ LT L P S + F+ +G + L
Sbjct: 270 TFLIILAFTILTTLKRDPVKSKPF----EAFLGVICPILSLCASFGHLFW--MGFEY-LP 322
Query: 213 IMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFA 272
I+ V+PFL+L++GVD++ I +HA R + + R++ L + GPSI++ SL+ +L+FA
Sbjct: 323 IVTVVPFLILSIGVDDVFIFIHAWHRTPYKHSVRDRMAETLADAGPSISITSLTNLLSFA 382
Query: 273 VGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKR 319
+G F P PA F + QI F A++V R E ++
Sbjct: 383 IGIFTPTPAIYTFCVFISTAVIYDYIYQIFFFSAVLVLSGEREEQRK 429
Score = 131 (51.2 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 43/182 (23%), Positives = 83/182 (45%)
Query: 587 YHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIA 646
+ T + + + + + + S+ + + Y F MY +Q L I + +
Sbjct: 631 FSTGFHDAVSWSDRLALLENWREMASEYQHLNLTIYEDFSMYSDQLLTI--VPVTQSTVF 688
Query: 647 IGAVFVVCLITTCSFWSSAIILLVLTMIVVDL-MGVMAIL---KIQLNAVSVVNLVMAVG 702
+ ++ ++T F S + ++ T V+ + +GV L I L+ +S+ L+MA+G
Sbjct: 689 CALICMIMILTL--FTPSPVTIVTSTAAVLSINLGVFGCLVYMNIDLDPISMTTLLMAIG 746
Query: 703 IAVEFCVHIT-HAFSVSSGDKNQRMKEALGTMGASVFSGITLTKL-VGVIVLCFS-RTEV 759
+V+F HIT H + K R++ AL + +F T T L + V+ L + +V
Sbjct: 747 FSVDFVAHITWHYYKGDFHSKRARIRHALAGIAWPMFQAGTSTMLAITVLALVHAYMVQV 806
Query: 760 FV 761
FV
Sbjct: 807 FV 808
Score = 39 (18.8 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 527 HHSDLLKDRPSTIQ 540
+H D L ++PS +Q
Sbjct: 614 NHQDCLSEKPSCLQ 627
>WB|WBGene00004230 [details] [associations]
symbol:ptr-16 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
EMBL:FO081216 GeneTree:ENSGT00680000099845 PIR:T31739
RefSeq:NP_503388.2 ProteinModelPortal:O16307 EnsemblMetazoa:T21H3.2
GeneID:191750 KEGG:cel:CELE_T21H3.2 UCSC:T21H3.2 CTD:191750
WormBase:T21H3.2 eggNOG:NOG318074 HOGENOM:HOG000016269
InParanoid:O16307 NextBio:950208 Uniprot:O16307
Length = 820
Score = 192 (72.6 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 73/326 (22%), Positives = 139/326 (42%)
Query: 93 DREGNETKKAVA-WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITI 151
DR+ E + + WE + ++ P + N+T+ +S++ I E++ + +T
Sbjct: 133 DRQTTEVSQVLNNWETSLFDYVENFDHPFL---NMTV--NSDAMIAREVR----TNGMTC 183
Query: 152 VISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTL 211
V + A + + + T F F G
Sbjct: 184 VPFFSFSVAAVVIFIFATNSREHFVFSHNVVMAILGIAGPLMATGTAFGFLFLFGFPFNS 243
Query: 212 IIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAF 271
I + V+PFL++ VG D++ I++HA+++ LE RI+ + E GPSIT+ S + L+F
Sbjct: 244 ITL-VMPFLIIGVGCDDVFIIIHAMRKTDKSESLEDRIAETMEEAGPSITVTSATNCLSF 302
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLR-------AEDKRVDCIP 324
A+G P PA +F + Q+T FVA++V++ R E+K+++
Sbjct: 303 AIGIATPTPAISLFCLYTCVAVAVDFVYQLTFFVAVLVYEEKRLMKLQKVGEEKKIEAAM 362
Query: 325 CLKLSS--SYADSDKGI-GQRKP-----GLLARYMKEVHATILSLWGVKIAVISLFVAFT 376
+ S +S + G P G+++RY + L W ++ ++ + +
Sbjct: 363 ERRPKQVLSIQNSIRSTAGAHPPPANPNGIVSRYCR-----FLKDWKTRLCLLLVLCGYW 417
Query: 377 LASIALCTRIEPGLEQKIVLPRDSYL 402
AS C +E ++ ++ DS L
Sbjct: 418 TASYYGCKTMEIKMDTTNLIMNDSPL 443
Score = 119 (46.9 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 45/213 (21%), Positives = 101/213 (47%)
Query: 558 AKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQM 617
++GG + + + LK ENG + + T D S R + R + +
Sbjct: 530 SEGGGARWNDMLRLKKDENGTILGIDKFMFATACAMGDDANWSTREKLQKQWR-GVAHEY 588
Query: 618 EIFPYSVF--YMYFEQYLD-IWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMI 674
E F +VF Y ++ LD I T + + A + + CL+ S + + I
Sbjct: 589 EHFNVTVFQSYSFYIDQLDSIGATTMSTVIWAAITMDLACLLMIPGINSILTSTIAMISI 648
Query: 675 VVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAF--SVSSGDKNQRMKEALGT 732
+ + G++++ ++ L+ +++ +M++G +V+F HI++ + + +S ++R+ +AL +
Sbjct: 649 NIGVFGLLSMWRVNLDPITMCTTLMSIGFSVDFTAHISYHYYRNPTSWTTDERLADALKS 708
Query: 733 MGASVFSGITLTKLVGVIVLCFSRTEVFVVYYF 765
+G + + T L + L F+ + ++V+ F
Sbjct: 709 IGWPMIQAASSTVLC-IFPLMFNTS--YMVWVF 738
>WB|WBGene00004223 [details] [associations]
symbol:ptr-9 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 EMBL:Z19155
GeneTree:ENSGT00680000099845 PIR:S28276 RefSeq:NP_499030.2
ProteinModelPortal:Q03602 EnsemblMetazoa:F54G8.5 GeneID:191747
KEGG:cel:CELE_F54G8.5 UCSC:F54G8.5 CTD:191747 WormBase:F54G8.5
eggNOG:NOG243310 HOGENOM:HOG000018097 InParanoid:Q03602 OMA:ESTERWI
NextBio:950196 Uniprot:Q03602
Length = 844
Score = 163 (62.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 65/292 (22%), Positives = 123/292 (42%)
Query: 118 LPMVQSKNLTLAFSSESSIEEELKRESTA-----DAITIVISYLVMFAYISLTLGDTPHL 172
+P + N T+ +SS S+ +E++R ++V+ MFA SL + +
Sbjct: 235 IPRYKETNSTIFWSSSKSLAKEMERNGELLIPWMPWTSLVLVVFCMFACSSLNIVKSQPF 294
Query: 173 SSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCIL 232
F+ F L ++ ++PFLV+++G DNM ++
Sbjct: 295 IGFF--AMFNATMATIASTSLLLYLQYPF---------LPLVFIMPFLVVSIGTDNMFLM 343
Query: 233 VHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXX 292
+ + + + E R +AL E S+ L SL++ L+FA+GS A RVF
Sbjct: 344 LKSWRMTKKSSNEEQRYIHALTESAASLFLTSLTDGLSFAIGSISDFHAVRVFCTYCAMA 403
Query: 293 XXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADS--DKGIGQRKPGLLARY 350
Q+T F A++ R + C +++ +K ++A++
Sbjct: 404 ILFMFLFQVTFFNAVMSLCCRREVSGKHPVFCCYEITPPEETQVLEKQSNFDFSSIVAKH 463
Query: 351 MKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYL 402
+ ++ + S +I V +F+A+ SI + GL+ K++ P DSY+
Sbjct: 464 LFKILNPLPS----RIGVFFIFLAYLFISIHFAIGLPLGLDLKLLAPDDSYV 511
Score = 156 (60.0 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 66/267 (24%), Positives = 116/267 (43%)
Query: 211 LIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLA 270
L ++ ++PFLV+++G DNM +++ + + + E R +AL E S+ L SL++ L+
Sbjct: 322 LPLVFIMPFLVVSIGTDNMFLMLKSWRMTKKSSNEEQRYIHALTESAASLFLTSLTDGLS 381
Query: 271 FAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSS 330
FA+GS A RVF Q+T F A++ R + C +++
Sbjct: 382 FAIGSISDFHAVRVFCTYCAMAILFMFLFQVTFFNAVMSLCCRREVSGKHPVFCCYEITP 441
Query: 331 SYADSDKGIGQRKPGLLARYMKEVHA-TILSLWGVKIAVISLFVAFTLASIALCTRIEPG 389
+ + +++ + H IL+ +I V +F+A+ SI + G
Sbjct: 442 P---EETQVLEKQSNFDFSSIVAKHLFKILNPLPSRIGVFFIFLAYLFISIHFAIGLPLG 498
Query: 390 LEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSL 449
L+ K++ P DSY +S+ L L+ + ++ R N IS D
Sbjct: 499 LDLKLLAPDDSY-------VSKELEAQERLFADYGGFCFALV-RAEN----ISLKDPMVR 546
Query: 450 LNEISRASLIPQSSYIAKPAASWLDDF 476
N I + S Y + P+ WLD F
Sbjct: 547 RNLIGLYRDLGGSEY-SSPSEFWLDPF 572
Score = 141 (54.7 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 36/162 (22%), Positives = 77/162 (47%)
Query: 606 EFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSA 665
E+ +V ++ Q F Y ++ +Q + ++++ AI + +C++ S+
Sbjct: 636 EYMRKVMENSQFNGFVYDTSFLLVDQQMTTVYNVIVDVVSAILTMLSICVLMVPRPVSAM 695
Query: 666 IILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQR 725
I + + + ++G +A +L+ +S++ +VM+VG +V++ H T F + ++ ++
Sbjct: 696 CIAFAILSVNIGVIGALAATNTRLDIISMITIVMSVGFSVDYVTHTTFHFVIQRDNRLEK 755
Query: 726 ----MKEALGTMGASVFSGITLTKLV-GVIVLCFSRTEVFVV 762
M E + S G++L V IV F T FVV
Sbjct: 756 CLLVMTEPILQSALSTAIGVSLLSFVHSYIVRTFVNTVFFVV 797
>RGD|621425 [details] [associations]
symbol:Ptch1 "patched 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001841
"neural tube formation" evidence=ISO] [GO:0001843 "neural tube
closure" evidence=ISO] [GO:0003007 "heart morphogenesis"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005113 "patched binding" evidence=ISO] [GO:0005119 "smoothened
binding" evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005901 "caveola" evidence=ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007224 "smoothened signaling
pathway" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=ISO] [GO:0007389 "pattern specification process"
evidence=ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0008201 "heparin binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0008544
"epidermis development" evidence=ISO] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=ISO] [GO:0009612 "response
to mechanical stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO] [GO:0010157 "response to chlorate"
evidence=ISO] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0015485 "cholesterol binding" evidence=ISO]
[GO:0016485 "protein processing" evidence=ISO] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=ISO] [GO:0021532
"neural tube patterning" evidence=ISO] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=ISO] [GO:0021997 "neural plate
axis specification" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0030332 "cyclin binding"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0030879
"mammary gland development" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=IEP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0032526 "response to retinoic acid"
evidence=IEP] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0035108 "limb morphogenesis" evidence=ISO]
[GO:0035137 "hindlimb morphogenesis" evidence=ISO] [GO:0040008
"regulation of growth" evidence=ISO] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042493 "response to drug" evidence=IEP] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0043616 "keratinocyte proliferation"
evidence=ISO] [GO:0044294 "dendritic growth cone" evidence=IDA]
[GO:0044295 "axonal growth cone" evidence=IDA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=ISO]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISO] [GO:0051782 "negative regulation of
cell division" evidence=ISO] [GO:0060037 "pharyngeal system
development" evidence=ISO] [GO:0060603 "mammary gland duct
morphogenesis" evidence=ISO] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=ISO] [GO:0060831 "smoothened
signaling pathway involved in dorsal/ventral neural tube
patterning" evidence=ISO] [GO:0061005 "cell differentiation
involved in kidney development" evidence=ISO] [GO:0061053 "somite
development" evidence=ISO] [GO:0071397 "cellular response to
cholesterol" evidence=ISO] [GO:0072001 "renal system development"
evidence=ISO] [GO:0072203 "cell proliferation involved in
metanephros development" evidence=ISO] [GO:0072372 "primary cilium"
evidence=ISO] [GO:0072661 "protein targeting to plasma membrane"
evidence=ISO] [GO:0097108 "hedgehog family protein binding"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
InterPro:IPR000731 InterPro:IPR004766 PROSITE:PS50156 RGD:621425
GO:GO:0016021 GO:GO:0014069 GO:GO:0009612 GO:GO:0042493
GO:GO:0032355 GO:GO:0032526 GO:GO:0044295 GO:GO:0008158
GO:GO:0044294 HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 IPI:IPI00396901
UniGene:Rn.102312 EMBL:AF079162 ProteinModelPortal:Q9Z2A1
STRING:Q9Z2A1 UCSC:RGD:621425 InParanoid:Q9Z2A1
Genevestigator:Q9Z2A1 Uniprot:Q9Z2A1
Length = 608
Score = 248 (92.4 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 69/242 (28%), Positives = 106/242 (43%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE + A AW++ +V++ + P S L+F++ + +++ LK S I +
Sbjct: 374 NEDRAAAILEAWQRTYVEVVHQSVAP--NSTQKVLSFTTRT-LDDILKSFSDVSVIRVAS 430
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 431 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 485
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P+E R L G S+ L S+S V AF
Sbjct: 486 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPIEDRTGECLKRTGASVALTSISNVTAF 545
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVD---CI--PCL 326
+ + IP+PA R FS+ + F A++ D R ED+R+D C PC+
Sbjct: 546 FMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCV 605
Query: 327 KL 328
L
Sbjct: 606 SL 607
>WB|WBGene00004221 [details] [associations]
symbol:ptr-6 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0018996 GO:GO:0040011 GO:GO:0040018
GO:GO:0008158 GeneTree:ENSGT00680000099845 EMBL:FO080943 PIR:T15830
RefSeq:NP_494986.2 ProteinModelPortal:Q09938 PaxDb:Q09938
EnsemblMetazoa:C54A12.1 GeneID:173898 KEGG:cel:CELE_C54A12.1
UCSC:C54A12.1 CTD:173898 WormBase:C54A12.1 eggNOG:NOG280798
HOGENOM:HOG000017068 InParanoid:Q09938 OMA:ILTAICS NextBio:881585
Uniprot:Q09938
Length = 982
Score = 149 (57.5 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 51/199 (25%), Positives = 97/199 (48%)
Query: 574 YENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYL 633
Y+ +++ FR L+ D V R + R D + I Y +Q
Sbjct: 730 YDTLELKSYRFRIGVHRLSTPTDLVLITEELRGVADRHPD---LNIVTYQQSRAIADQLN 786
Query: 634 DIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLT--MIVVDL--MGVMAILKIQL 689
I + + N +A+ +F V LI F + I L +T M+ +D+ +G +++ ++L
Sbjct: 787 VILSSTITNDTLAMFCMFCVALI----FIPNPICALFITFAMVTIDIGVIGFLSLWSVKL 842
Query: 690 NAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKN----QRMKEALGTMGASVFSGITLTK 745
+ +S++ ++M++G ++EF HITH F S D N R +A+ + V G +L+
Sbjct: 843 DPISMITIIMSIGFSIEFSAHITHGFV--SNDSNLSAFDRCVDAMEKLAWPVVHG-SLST 899
Query: 746 LVGVIVLCFSRTEVFVVYY 764
++GV VL F + + +V++
Sbjct: 900 ILGVFVLAFIDSYMVLVFF 918
Score = 145 (56.1 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 41/143 (28%), Positives = 65/143 (45%)
Query: 216 VIPFLVLAVGVDNMCILVHAVKRQQLELP------LETRISNALVEVGPSITLASLSEVL 269
+ PFLVL++GVD+M I V A +++ P ++ R+ A+ E +I + S ++VL
Sbjct: 373 IAPFLVLSIGVDDMFIAVAAWHNTEMKYPGRSPKVMKKRMIEAMSESAVAIFITSFTDVL 432
Query: 270 AFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLS 329
+F G+ + A + F QIT F AL+V R C+PC+
Sbjct: 433 SFGAGTITDIIAVQGFCAMTAACMFFTFLYQITFFAALMVISAKAQMSGRNSCMPCITAG 492
Query: 330 SSYADSDKGIGQRKPGLLARYMK 352
Y D G +P L + K
Sbjct: 493 DIYTIED---GSLQPNLKKKKSK 512
Score = 58 (25.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 26/113 (23%), Positives = 50/113 (44%)
Query: 330 SSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASI-ALCTRIEP 388
SS S I + G + + ++ + L W K+ + F+ + S+ +C +E
Sbjct: 549 SSPDPSQIHIPVKSRGAMGHFFRDYYVPWLLNWKTKLFMFVTFIIYLGISVYGICV-MEQ 607
Query: 389 GLE-QKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNY-NYS-SESRQTNQL 438
GL+ K++L D ++ I E G + ++N N + +ESR +L
Sbjct: 608 GLDYDKLLLHSDPLVEALKREI-ELFHGGDQIEIAIQNCPNITIAESRDRIEL 659
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 359 LSLWGVKIAVISL 371
LSLW VK+ IS+
Sbjct: 835 LSLWSVKLDPISM 847
Score = 37 (18.1 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 2 ISLTDICMKPLGQDCATQ-SVLQYFK 26
I+ D+CM G DC + +V++ K
Sbjct: 168 ITFKDVCMNWYG-DCYREKNVIELLK 192
>UNIPROTKB|I3LN22 [details] [associations]
symbol:PTCHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:FP326681 Ensembl:ENSSSCT00000031258 OMA:FWLRTYV Uniprot:I3LN22
Length = 441
Score = 182 (69.1 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 63/248 (25%), Positives = 112/248 (45%)
Query: 205 IGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLAS 264
IGV I+ PFL+L VGVD+M I++ A ++ + L+ R+S +V SIT+ +
Sbjct: 25 IGVPFVTIVANS-PFLILGVGVDDMFIMLAAWQKTNIVDNLKERMSTVYSKVAVSITITT 83
Query: 265 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAED-----KR 319
++ VLAF G + + F + IT F A + D R K+
Sbjct: 84 ITNVLAFYTGIMTSFRSLQYFCIYTGTTLLFCYLYNITCFGAFMALDGKREAICLRWLKK 143
Query: 320 VDCIP--CLKLSSSYADSDKGIGQRKPG---LLARYMKEVHATILSLWGVKIAVISLFVA 374
+ CL L S + + +++ + + ++ L+ K V+ L+
Sbjct: 144 PETPDQKCLSLKKSCCNPCNSLPEQQADDIHPMNLFFRDYFGPFLTRPEAKFFVVLLYTL 203
Query: 375 FTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRI-GPPLYFVVKN-YNYSSES 432
+ + SI C +++ GL+ + + DSY+ YFN E+ I GP + ++ +Y E+
Sbjct: 204 YLILSIYGCFQVQEGLDLRNLASDDSYITPYFNVEEEYFSIYGPRVMVIITEALDYWDEA 263
Query: 433 -RQTNQLC 439
RQ + C
Sbjct: 264 TRQKLEKC 271
Score = 86 (35.3 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 616 QMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITT----CSFWSSAIILLVL 671
++ + Y+ ++YF+QY I + N+ +A A+F+V L+ CS W + I V+
Sbjct: 369 EIPLMVYNHAFIYFDQYFSILENTVRNVIVASTAMFIVSLLLIPHPLCSLWVTLAIASVI 428
Query: 672 TMIVVDLMGVMAI 684
+ V M+I
Sbjct: 429 VGVTVSWHSGMSI 441
>UNIPROTKB|H9L1J3 [details] [associations]
symbol:H9L1J3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021
GeneTree:ENSGT00680000099777 EMBL:AADN02079001
Ensembl:ENSGALT00000035551 OMA:NISMETR Uniprot:H9L1J3
Length = 199
Score = 197 (74.4 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 47/161 (29%), Positives = 77/161 (47%)
Query: 203 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITL 262
S +G+ +V+PFL L +GVD+M +L HA +P + R L G S+ L
Sbjct: 43 SLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTETSQHIPFKERTGECLRRTGTSVAL 102
Query: 263 ASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDC 322
S+S ++AF + + +P+PA R FS+ + F A++ D R E +R+D
Sbjct: 103 TSVSNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLFIFPAILSLDLYRREKRRLDI 162
Query: 323 IPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWG 363
+ C Y+ + Q +P LA + HA+ S +G
Sbjct: 163 LCCF-----YSPCSSRVIQIQPQELAD-ANDNHASHPSPYG 197
>WB|WBGene00004228 [details] [associations]
symbol:ptr-14 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR000731 InterPro:IPR001036 InterPro:IPR003392
Pfam:PF02460 PRINTS:PR00702 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0005215
GO:GO:0008158 EMBL:Z77134 GeneTree:ENSGT00680000099845
HOGENOM:HOG000017328 PIR:T24097 RefSeq:NP_501963.1
ProteinModelPortal:Q21883 SMR:Q21883 MINT:MINT-3384080 PaxDb:Q21883
EnsemblMetazoa:R09H10.4 GeneID:177951 KEGG:cel:CELE_R09H10.4
UCSC:R09H10.4 CTD:177951 WormBase:R09H10.4 eggNOG:NOG320277
InParanoid:Q21883 OMA:ITIYYSS NextBio:899094 Uniprot:Q21883
Length = 877
Score = 157 (60.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 213 IMEVIPFLVLAVGVDNMCILVHAVKRQQLE---LPLETRISNALVEVGPSITLASLSEVL 269
I+ V PFL+LA+GVD+ + VHA R E + +I+ LVEVGPSI + S++ +
Sbjct: 323 ILCVTPFLILAIGVDDAYLQVHACMRLTAEDSSMTKREKIARMLVEVGPSIAITSMTNLF 382
Query: 270 AFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALI 308
AF VG + P P +F QIT + A++
Sbjct: 383 AFLVGIYTPTPEISLFCAGNAVAILFDFIYQITMYTAIL 421
Score = 117 (46.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 39/150 (26%), Positives = 75/150 (50%)
Query: 623 SVF--YMYFEQYLDIWRTALINLAIA-IGAVFVVCLITTCSFWSSAIILLVLTMIVVDLM 679
S+F Y F L+ A I+ ++ + + +VC + + ++ + L +T I + +
Sbjct: 663 SIFDDYAPFVDTLETILPATISTSVCTLICMMIVCFLFMYNVFTVFVATLAITSICIGVF 722
Query: 680 GVMAILKIQLNAVSVVNLVMAVGIAVEFCVHIT-HAFSVSSGDKN----QRMKEALGTMG 734
G +++ I L+ +S+ L+M++G +V+F HIT H F D +R+ +L +G
Sbjct: 723 GFLSMWGIDLDPISMACLIMSIGFSVDFPAHITFHYFREGLHDPQSTPAKRVARSLAAIG 782
Query: 735 ASVFSGITLTKLVGVIVLCFSRT---EVFV 761
+ L+ ++ V+ L F T EVFV
Sbjct: 783 FPLLQ-CGLSTILFVLCLLFVPTYMGEVFV 811
Score = 40 (19.1 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 650 VFVVCLITTCSFWSSAIILLVLTMIVVDLMGVM 682
+FV+CL+ ++ + V TMI+V +G++
Sbjct: 794 LFVLCLLFVPTYMGE---VFVKTMILVVTLGLI 823
Score = 37 (18.1 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 359 LSLWGVKIAVISL 371
LS+WG+ + IS+
Sbjct: 725 LSMWGIDLDPISM 737
>WB|WBGene00004225 [details] [associations]
symbol:ptr-11 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 GO:GO:0040011
GO:GO:0040018 GO:GO:0040025 GO:GO:0008158 EMBL:FO081456
GeneTree:ENSGT00680000099845 PIR:T32908 RefSeq:NP_490687.1
ProteinModelPortal:O44978 SMR:O44978 PaxDb:O44978
EnsemblMetazoa:F56C11.2 GeneID:171609 KEGG:cel:CELE_F56C11.2
UCSC:F56C11.2 CTD:171609 WormBase:F56C11.2 eggNOG:NOG278286
HOGENOM:HOG000017687 InParanoid:O44978 OMA:RAMQHIR NextBio:871995
Uniprot:O44978
Length = 820
Score = 148 (57.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 216 VIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGS 275
V PFLVL +GVD+ IL+H K R+ +V+VGPSIT+ SL+ ++AF +G
Sbjct: 303 VTPFLVLGIGVDDAFILLHRWKHHIAITDTPRRLEQVIVDVGPSITITSLTNIIAFGIGF 362
Query: 276 FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVF 310
P P +F + T +A IVF
Sbjct: 363 LTPTPQMSLFCLTASLALLLDYIFTYT-ILAPIVF 396
Score = 124 (48.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 34/134 (25%), Positives = 73/134 (54%)
Query: 638 TALI-NLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVN 696
T LI ++A+ + + +VC + +F + A+I V+ I L+G +++ L+ V V+
Sbjct: 638 TDLIGSIAVTVVCMAIVCFVFIANFNAVAVITSVIASICYVLVGGLSLWGADLDPVIQVD 697
Query: 697 LVMAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMG-----ASVFSGITLTKLVGV-- 749
+++A G +V++ H+ + F + G +R+ +L M A + + + + L+ V
Sbjct: 698 VLLATGFSVDYTAHVAYNFFRARGTPQERVYSSLAEMAMPMCEAGLSTFLCMLPLIFVPT 757
Query: 750 -IVLCFSRTEVFVV 762
++CF++T VF+V
Sbjct: 758 YAIVCFAKT-VFLV 770
Score = 45 (20.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 664 SAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAV 705
SAI+ ++LT + DL+G +A+ + + V V + +AV
Sbjct: 627 SAILSIILT-VGTDLIGSIAVTVVCMAIVCFVFIANFNAVAV 667
>UNIPROTKB|F1P513 [details] [associations]
symbol:F1P513 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:AADN02000548 EMBL:AADN02000547 IPI:IPI00822125
Ensembl:ENSGALT00000038452 OMA:ESSANER Uniprot:F1P513
Length = 843
Score = 219 (82.2 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 61/205 (29%), Positives = 105/205 (51%)
Query: 570 DLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYF 629
D+ GI AS F + +D N + R+ R + + + Y ++Y+
Sbjct: 628 DIHKTAEGIA-ASRFFIQTVNVTSAVDEKNLLNELRD---RAKQCV-VPLMVYHPAFIYY 682
Query: 630 EQYLDIWRTALINLAIAIGAVFVVCLITT----CSFWSSAIILLVLTMIVVDLMGVMAIL 685
+QYL I + + N+ IA GA+ VV L+ C W + + ++V + G M
Sbjct: 683 DQYLVIVQNTIQNVLIAAGAMLVVSLVLIPNPLCCLW----VTFSIASVIVGVSGFMTFW 738
Query: 686 KIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDK--NQRMKEALGTMGASVFSGITL 743
I L+++S++NLV+ +G +V+F HI++AF V+SG+ N+R AL +G V G
Sbjct: 739 DISLDSISMINLVICIGFSVDFSAHISYAF-VTSGESSANERAIGALHQLGYPVLQGAVS 797
Query: 744 TKLVGVIVLCFSRTEVFVVYYFQMY 768
T L GV+VL ++T +F ++ M+
Sbjct: 798 TVL-GVVVLAAAKTYIFRTFFKIMF 821
>UNIPROTKB|G3N231 [details] [associations]
symbol:PTCHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:DAAA02058443 Ensembl:ENSBTAT00000064106 Uniprot:G3N231
Length = 717
Score = 214 (80.4 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 87/377 (23%), Positives = 165/377 (43%)
Query: 95 EGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIV-- 152
EG E +++ AW F+ + L + K + + + S S+ +L+ E+T+ + +
Sbjct: 284 EGEENERSKAWMIHFL-MKVGSLEESLALKKIQVVYFS--SLSRQLEFEATSMTVVPLFH 340
Query: 153 ISYL--VMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKST 210
++YL ++FA +S D + ++ +GV
Sbjct: 341 LAYLLIILFAIVSCYRCDCVR-NKMWVAVFGVISTALAVVSGFGLMLY------VGVPFV 393
Query: 211 LIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLA 270
LI+ PFL+L VGVD+M I++ A ++ L + R+S+ +V SIT+ +++ VLA
Sbjct: 394 LIVANS-PFLILGVGVDDMFIMISAWQKTSLTDSISERMSDVYSKVAVSITITTVTNVLA 452
Query: 271 FAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLR------------AEDK 318
F G + + F + IT F A + D R ++
Sbjct: 453 FYTGIMTSFRSVQYFCIYTGTTLLFCYFYSITCFGACMALDGKREGVCLRWLKKPETPNQ 512
Query: 319 RVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLA 378
+ C CL SS + + I P L + ++ L+ KI V+ L+ ++ +
Sbjct: 513 KKSC--CLPGSSLQDECEADI---HPMNL--FFRDYFGPFLTSTKAKICVVLLYASYIIT 565
Query: 379 SIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRI-GPPLYFVVKN-YNY-SSESRQT 435
S+ C R+E GL+ + + DSY+ YFN EH GP + ++ +Y ++RQ
Sbjct: 566 SLYGCFRVEEGLDLRNLASDDSYITPYFNVEEEHFSTYGPRVMVIITEALDYWDKDARQK 625
Query: 436 NQLCSISQCDSNSLLNE 452
+ C ++ +++ ++E
Sbjct: 626 LEKC-LADFENSEYVDE 641
>UNIPROTKB|H0Y3B8 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021 EMBL:AL161729
HGNC:HGNC:9585 ChiTaRS:PTCH1 Ensembl:ENST00000375271 Bgee:H0Y3B8
Uniprot:H0Y3B8
Length = 352
Score = 201 (75.8 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 46/125 (36%), Positives = 64/125 (51%)
Query: 203 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSI 260
S I V S ++M V+PFL L VGVD++ +L HA Q +P E R L G S+
Sbjct: 155 SVIRVASGYLLM-VLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASV 213
Query: 261 TLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRV 320
L S+S V AF + + IP+PA R FS+ + F A++ D R ED+R+
Sbjct: 214 ALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRL 273
Query: 321 DCIPC 325
D C
Sbjct: 274 DIFCC 278
>UNIPROTKB|H3BLX7 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021 EMBL:AL161729
HGNC:HGNC:9585 ChiTaRS:PTCH1 Ensembl:ENST00000375290 Bgee:H3BLX7
Uniprot:H3BLX7
Length = 486
Score = 203 (76.5 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 57/196 (29%), Positives = 87/196 (44%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 267 NEDKAAAILEAWQRTYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 323
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 324 GYLLMLAYACLTM-----LRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 378
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 379 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 438
Query: 272 AVGSFIPMPACRVFSM 287
+ + IP+PA R FS+
Sbjct: 439 FMAALIPIPALRAFSL 454
>WB|WBGene00004236 [details] [associations]
symbol:ptr-22 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:AL132853 GeneID:191753
KEGG:cel:CELE_Y80D3A.7 CTD:191753 RefSeq:NP_001256834.1
ProteinModelPortal:H1UBK7 EnsemblMetazoa:Y80D3A.7a
WormBase:Y80D3A.7a OMA:SAHISYH Uniprot:H1UBK7
Length = 888
Score = 140 (54.3 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 54/233 (23%), Positives = 106/233 (45%)
Query: 529 SDLLKDRPSTIQFK---EKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFR 585
S+ +++P+ +F+ LP FLN+ P Y+ S +K E +++ F
Sbjct: 579 SNFSEEKPAKSRFQFTYSDLPAFLNSEPQYKPMI----RYSESECVKNSEK-CIESFIFT 633
Query: 586 TYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLD----IWRTALI 641
T T + + Y E+ ++ + E++PY+ + +Q +D IW T +I
Sbjct: 634 TGFTDV---VKYNEMYPVVSEWRKIAANYSEFEVYPYTERSNFVDQTVDMVDNIWNT-VI 689
Query: 642 NLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAV 701
+ I +G F++ + S +S+ L + V G ++I + ++ VS +L+M++
Sbjct: 690 SEVICMGLTFILFIPDLISIFSAVFALFSVNFGV---FGFLSIWGVGMDPVSTASLLMSI 746
Query: 702 GIAVEFCVHIT-HAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGV-IVL 752
G +V+ HI+ H + V Q+++ +G G T L + IVL
Sbjct: 747 GFSVDISAHISYHYYQVDKPTARQKLEHVYSHIGWPTLQGGLSTMLAMMPIVL 799
Score = 119 (46.9 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 46/193 (23%), Positives = 87/193 (45%)
Query: 203 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITL 262
SA G+ II+ + FLV+A+G+D++ I++ A R L + R++ + E G S+T+
Sbjct: 301 SATGLAFQSIIVSTL-FLVIAIGIDDIFIILAAWHRTDKHLEIPERMALTVQEAGCSMTV 359
Query: 263 ASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDC 322
+++ +++F G P + F++ Q+ F A+I K D
Sbjct: 360 TTVTNLVSFGNGVLSTTPVLQTFAIYSSVASVVCYIYQLVIFPAIIAITAPNEYQKLGDS 419
Query: 323 IPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIAL 382
K ++ D K +GQ R ++ I + W V++ IS+ + + S+
Sbjct: 420 ----KEEKTW-DIIKTMGQWSD----RQWHKLAGAISTSW-VRLLTISILLGYWYLSVYG 469
Query: 383 CTRIEPGLE-QKI 394
+E L QK+
Sbjct: 470 IATMETDLTIQKM 482
Score = 46 (21.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 218 PFLVLAVGVDNMCILVHAVKRQQLEL-PLETRISNALVEVGPSITLASLSEVLAFAVGSF 276
P+L +A+ + + ++V +++ ++ E PLE + AL+ V IT + A S
Sbjct: 252 PWLSVALAILGVFLMVCSLRYRRAESKPLEACLG-ALIPVLSGITTIGMVSATGLAFQSI 310
Query: 277 I 277
I
Sbjct: 311 I 311
>UNIPROTKB|G3N1D5 [details] [associations]
symbol:G3N1D5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021
GeneTree:ENSGT00680000099777 EMBL:DAAA02024005
Ensembl:ENSBTAT00000064817 OMA:KTTAMIP Uniprot:G3N1D5
Length = 563
Score = 203 (76.5 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 57/196 (29%), Positives = 87/196 (44%)
Query: 97 NETKKAV---AWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVI 153
NE K A AW++ +V++ + S L+F++ +++++ LK S I +
Sbjct: 375 NEDKAAAILEAWQRTYVEVVHQSVAQ--NSTQKVLSFTT-TTLDDILKSFSDVSVIRVAS 431
Query: 154 SYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLII 213
YL+M AY LT+ L S IG+
Sbjct: 432 GYLLMLAYACLTM-----LRWDCSRSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAAT 486
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKR--QQLELPLETRISNALVEVGPSITLASLSEVLAF 271
+V+PFL L VGVD++ +L HA Q +P E R L G S+ L S+S V AF
Sbjct: 487 TQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAF 546
Query: 272 AVGSFIPMPACRVFSM 287
+ + IP+PA R FS+
Sbjct: 547 FMAALIPIPALRAFSL 562
>WB|WBGene00004220 [details] [associations]
symbol:ptr-5 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080936 PIR:T25657
RefSeq:NP_510810.3 ProteinModelPortal:P91184 PaxDb:P91184
EnsemblMetazoa:C53C11.3 GeneID:181764 KEGG:cel:CELE_C53C11.3
UCSC:C53C11.3 CTD:181764 WormBase:C53C11.3 eggNOG:NOG257397
HOGENOM:HOG000020765 InParanoid:P91184 OMA:RIRDGYT NextBio:915242
Uniprot:P91184
Length = 961
Score = 153 (58.9 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 203 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLET--RISNALVEVGPSI 260
S +G+++ ++ V+PFLV+ +GVD+ +++H+ ++++ T R+ VGPSI
Sbjct: 379 SILGMRTNSFML-VMPFLVMGIGVDSCFLMIHSWQKERRAQASGTGNRLGMVYESVGPSI 437
Query: 261 TLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRV 320
T+ SL++ L+FA+G+ P P R+F + Q+ F ++ R E K
Sbjct: 438 TITSLTDFLSFAIGALAPTPETRLFCIASSIALALTYILQLVLFGPILAVA-TRYEHKTT 496
Query: 321 DCIPC 325
C
Sbjct: 497 TTSNC 501
Score = 101 (40.6 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 27/148 (18%), Positives = 69/148 (46%)
Query: 574 YENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYL 633
YE G+++ F + + + ++ ++ ++ + + + M+ +Q L
Sbjct: 687 YEEGVIKLDRFMM-NVAYDNTSSWDTRIQLMTDWRKVANNYSDLNVTVWEPNGMFVDQML 745
Query: 634 DIWRTALINLAIAIGAVFVVCLI---TTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLN 690
+ RTA + + VVC I CS ++ + + +T +MG +++ L+
Sbjct: 746 SLGRTATQTGIWTLVCMAVVCAIFIPNPCSIITATVSIASIT---TGVMGFLSLWSFDLD 802
Query: 691 AVSVVNLVMAVGIAVEFCVHITHAFSVS 718
V + ++M++G++V+F H+ + F ++
Sbjct: 803 PVVMAAVLMSIGLSVDFIAHVAYHFQLA 830
>WB|WBGene00004226 [details] [associations]
symbol:ptr-12 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080962 RefSeq:NP_001021559.2
UniGene:Cel.34174 ProteinModelPortal:H2KZH1 EnsemblMetazoa:K07A3.2a
GeneID:171816 KEGG:cel:CELE_K07A3.2 CTD:171816 WormBase:K07A3.2a
OMA:GITIMNI Uniprot:H2KZH1
Length = 901
Score = 139 (54.0 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 67/302 (22%), Positives = 128/302 (42%)
Query: 122 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLT-LGDTPHLSSFYIXXX 180
+S + + S S +E E+ R + +++ +++M S+T ++ I
Sbjct: 255 ESPEIRVLTLSTSYVEAEVVRAGMSLLPFLIVGFVIMAIVSSVTTFFSAVYMQQVSIHKF 314
Query: 181 XXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQ 240
F GV+ I+ V PFLVLA+GVD+ +++H+ +R
Sbjct: 315 SLAIAACICPFMACGTALGALFFC-GVRFGSILC-VTPFLVLAIGVDDAYLMIHSWQRVT 372
Query: 241 LEL---PLE-----TRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXX 292
E P+ +R+S LV+ GP+I +++L+ + A G F P +
Sbjct: 373 AERRKHPVANDSPGSRLSEVLVDTGPAILISALTNIFADVAGCFTSSPEISLLGYGNMAC 432
Query: 293 XXXXXXXQITAFVALIV----FDFLRAEDKR-VDCIPC------LKLSSSYADSDKGIGQ 341
QIT + A++ F+ E KR + I C +SS +S I +
Sbjct: 433 IFCDFLYQITFYSAIMTLTGYFEMKDEEQKRHIKKIACGADSDDSSCTSSSVESFDVIVK 492
Query: 342 RKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSY 401
R+ + +++ + I + + +I V+ +++AF + SI T + L + + DS
Sbjct: 493 RR---VTSFLENYISLITNAF-FQIFVVLVWIAFLVVSIYGITIMNINLSPRKLFMEDSS 548
Query: 402 LQ 403
L+
Sbjct: 549 LR 550
Score = 106 (42.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 30/161 (18%), Positives = 73/161 (45%)
Query: 599 NSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYL--DIWRTALINLAIAIGAVFVVCLI 656
+++R R + S + +F Y+ + + D W++A+ LA + +C +
Sbjct: 694 DALREWRNVVDKYSAEFGLSVFSDDGIYVDLIENMPTDAWQSAVATLA----CMAFICFV 749
Query: 657 TTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFS 716
+ + ++ I+ ++G++++ L+ + + L++++G +V+ HI++ +
Sbjct: 750 FMYDVPTVMVATSIIASIMTGILGILSLTGTDLDPIVMSALIISIGFSVDIPAHISYHYH 809
Query: 717 VSSGDKN--QRMKEALGTMGASVFSGITLTKLVGVIVLCFS 755
S D R+ + L ++G T L V+ L FS
Sbjct: 810 TSPSDNGIRHRLHKTLSSVGFPALQATVSTSLC-VLSLKFS 849
>WB|WBGene00004234 [details] [associations]
symbol:ptr-20 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996
GO:GO:0040011 GO:GO:0040018 GO:GO:0045138 GO:GO:0008158
EMBL:AL132949 GeneTree:ENSGT00680000099845 RefSeq:NP_497114.1
ProteinModelPortal:Q9NAB5 EnsemblMetazoa:Y53F4B.28 GeneID:175165
KEGG:cel:CELE_Y53F4B.28 UCSC:Y53F4B.28 CTD:175165
WormBase:Y53F4B.28 eggNOG:NOG294458 HOGENOM:HOG000016731
InParanoid:Q9NAB5 OMA:DMENLYL NextBio:887026 Uniprot:Q9NAB5
Length = 860
Score = 150 (57.9 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 51/205 (24%), Positives = 94/205 (45%)
Query: 213 IMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFA 272
I+ V+PFLV+ +G+D+ +++ ++ LE R+ ++ G S+T+ S+++V FA
Sbjct: 307 ILTVVPFLVVTIGIDDAFLILAGWRQSTKGESLEVRLGQSVAISGASVTVTSVTDVACFA 366
Query: 273 VGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSY 332
G F MP ++F + Q+T F AL+ F+R K+VD L +
Sbjct: 367 TGLFSNMPVVQLFCLYTTVALAIDFIYQMTFFTALVGI-FVR---KQVDIEKELVKNEPK 422
Query: 333 ADSDK---GIGQRKPGLLARYM----KEVHA-TILSLW-------GVKIAVISLFVAFTL 377
+ K G L ++ +E H +IL ++ K+AV+ F+ L
Sbjct: 423 IEKTKEEEGASSSSLASLLTFVPTISQEAHTRSILEVFIDFLHTPVAKLAVVLAFIGHIL 482
Query: 378 ASIALCTRIEPGLEQKIVLPRDSYL 402
+AL + + + + + DS L
Sbjct: 483 ICLALVSHVNTNFDMENLYLEDSPL 507
Score = 99 (39.9 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 32/136 (23%), Positives = 67/136 (49%)
Query: 643 LAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAIL---KIQLNAVSVVNLVM 699
++ ++ AV ++ L+ + I+ V IV +G++ L + L+AVS+++++M
Sbjct: 676 ISTSVSAVVLMSLLVLVFIMNFEAIISVAVSIVSICLGIVVYLHLWNVNLDAVSLISMLM 735
Query: 700 AVGIAVEFCVHIT-HAFS-VSSGDKNQRMKEALGTMGA--SVFSGIT-------LTKLVG 748
++G +V++ H+ H F+ V ++ R T S F G+ L+ ++G
Sbjct: 736 SIGFSVDYSAHVCYHYFAHVHEDEQLWRSHNYAETRDRLLSTFRGVAWPVMQSGLSTILG 795
Query: 749 VIVLCFSRTEVFVVYY 764
+ L F R V V++
Sbjct: 796 MFPLMFVRAYVVAVFW 811
Score = 38 (18.4 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 17 ATQSVLQYFKMDPKNFDDFGGVEHVKY---CFQHYTSTESCMSAF 58
A V Q K N F G H+ Y C + + + + AF
Sbjct: 95 ALGEVSQAHKFVADNITAFDGTRHIAYKNLCGVYCNDSNAAVLAF 139
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 636 WRTALINLAIAIGA---VFVVCLITTCSFWSSAIILLVLTMI-VVDLMGVMAIL 685
W L+ +G +FV + FW + I++ +L M+ + L+ V+ IL
Sbjct: 783 WPVMQSGLSTILGMFPLMFVRAYVVAV-FWKTVILVGILGMLHALILLPVIFIL 835
>WB|WBGene00004227 [details] [associations]
symbol:ptr-13 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:Z47074 PIR:T23399
RefSeq:NP_496392.2 UniGene:Cel.14668 ProteinModelPortal:Q09934
PaxDb:Q09934 EnsemblMetazoa:K07C10.1 GeneID:191748
KEGG:cel:CELE_K07C10.1 UCSC:K07C10.1 CTD:191748 WormBase:K07C10.1
eggNOG:NOG321637 HOGENOM:HOG000016813 InParanoid:Q09934 OMA:NSIMCIT
NextBio:950200 Uniprot:Q09934
Length = 851
Score = 131 (51.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 47/195 (24%), Positives = 86/195 (44%)
Query: 213 IMEVIPFLVLAVGVDNMCILVHAVKRQQLE----LPLETRISNALVEVGPSITLASLSEV 268
IM + PFL+L +GVD+ +L++ +R++ + E +++ + E+ PS+ + SL+
Sbjct: 322 IMCITPFLILGIGVDDAFLLLNCWRREEGKDKSAKQAENQLARVIREISPSMAITSLTNT 381
Query: 269 LAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKL 328
+AF VG P P F + + FV +V F + K+ + I
Sbjct: 382 MAFGVGFLAPTPQMSSFCLGTALAIVLDFLLEFLIFVPCMVL-FYK---KKPEIIAIENE 437
Query: 329 SSSYADSDKGIGQRKPGLLARYMKEVHATIL-SLWGVKIAVISLFVAFTLASIALCTRIE 387
+ ++K + G +R + +L S+ G + +I F FT AS ++E
Sbjct: 438 EFANEKTEKR-SETSTGKYSRINWKCFTNLLLSVPGRVLVIILYFSIFT-ASYFGVAKME 495
Query: 388 PGLEQKIVLPRDSYL 402
+ P DS L
Sbjct: 496 KTFDPSKTFPSDSKL 510
Score = 109 (43.4 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 32/131 (24%), Positives = 63/131 (48%)
Query: 642 NLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAV 701
+LAI + + C + SF + I + I L+G ++I L+ V++++++MA+
Sbjct: 674 SLAITFTCMTIACFVIMPSFVAPTIASVATVSISFCLIGFLSIWGQNLDPVTMIDVIMAI 733
Query: 702 GIAVEFCVHITHAFSVSS----GDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRT 757
G +V++ H+ + + + G K++ + L +G V +LT L LC +
Sbjct: 734 GFSVDYSAHVCYHYYCAREQHLGSKHEVITSVLQAVGRPVVEA-SLTTL-----LCMAPL 787
Query: 758 EVFVVYYFQMY 768
V VY Q +
Sbjct: 788 FVVPVYMIQSF 798
>WB|WBGene00004222 [details] [associations]
symbol:ptr-8 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:Z37092 HOGENOM:HOG000017328
PIR:T22186 RefSeq:NP_496343.1 ProteinModelPortal:Q20404
EnsemblMetazoa:F44F4.4 GeneID:174678 KEGG:cel:CELE_F44F4.4
UCSC:F44F4.4 CTD:174678 WormBase:F44F4.4 eggNOG:NOG288640
InParanoid:Q20404 OMA:IMSIAIM NextBio:885030 Uniprot:Q20404
Length = 890
Score = 160 (61.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 74/344 (21%), Positives = 145/344 (42%)
Query: 99 TKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVM 158
TK WE +D S + + S++ +E E+ R + +++ +++M
Sbjct: 218 TKTVKQWELR----VRDHFAKEYSSDLIIVDVMSQTVVESEIVRAGLSLQPFLIVGFVIM 273
Query: 159 FAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKS----TLI-I 213
+ ++T S+ Y+ +A+G+ T I
Sbjct: 274 SIFCTVTT----MFSAVYLYSQKATFNKVALSIIACINPFMACGTAMGILFFCGVTFSPI 329
Query: 214 MEVIPFLVLAVGVDNMCILVHAVKRQQ------LELPL-ETRISNALVEVGPSITLASLS 266
M + PFLVLA+ VD+ +++HA R + L+ P+ E + LVE GP+I++++ +
Sbjct: 330 MCITPFLVLAISVDDSFLMLHAWNRLESWRTAPLDKPMREHMMGEVLVETGPAISISAFT 389
Query: 267 EVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCL 326
+LAF +G+ P R+F Q T + A + L + K
Sbjct: 390 NMLAFTIGAITSPPEIRIFCFGNAAAIFMDMFYQATFYTACMT---LLGDTKN------- 439
Query: 327 KLSSSYADSDKGIGQRKPGLLARYMK-EVHA--TILSLWGVKIAVISLFVAFTLASIALC 383
S ++ K I +R ++ R++K V+A I +G+ + V ++F+ F + +
Sbjct: 440 --SEGVSEKTKRIQERMGNVVGRFLKWYVNAISNIFVSFGI-VLVWAVFIGFAVLGL--- 493
Query: 384 TRIEPGLEQKIVLPRDSYLQGYFNNI--SEHLRIGPPLYFVVKN 425
TR+ L +DS + Y + + +E + P++ +V N
Sbjct: 494 TRLHVELRPSKFFLKDSPML-YMDRLRTNEVVPYYTPVHVIVNN 536
Score = 76 (31.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 21/113 (18%), Positives = 46/113 (40%)
Query: 613 DSLQMEIFPYSVFYMYFEQYLDI--WRTALINLAIAIGAVFVVCLITTCSFWSSAIILLV 670
D +F F++ + W+T L V +VC + + I+ +
Sbjct: 665 DDFNTTVFTEDAFFLDMIDSIPTVTWQTTLATFIF----VSLVCFLFISDILTVMIVSVA 720
Query: 671 LTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKN 723
+ V + G +++L + L+ V + +M +G +V+ H+ F + K+
Sbjct: 721 TLVTSVGVFGYLSLLGVTLDPVIMSIAIMCIGFSVDIPAHVAFHFYAAKAKKH 773
>UNIPROTKB|E2RPY7 [details] [associations]
symbol:PTCHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
OMA:CFLRRPG EMBL:AAEX03008381 Ensembl:ENSCAFT00000003323
Uniprot:E2RPY7
Length = 843
Score = 141 (54.7 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 43/214 (20%), Positives = 104/214 (48%)
Query: 548 FLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRTYHTPLNRQIDYVNSMRAAR 605
F++ L S+ K + N + G EN I+ + + T ++Q + + + R
Sbjct: 568 FISVLQSSFLKKPEFQHFRNDIIFSKAGDENNIIASRLYLVARTSRDKQKEVIEVLEKLR 627
Query: 606 EFSSRVSDSLQMEIFPYSVFYMYFEQY-LDIWRTALI---NLAIAIGAVFVVCLITTCSF 661
S +S S++ +F S +++ + Y L + LI + + + F + + +F
Sbjct: 628 PLS--LSKSIRFIVFNPS--FVFMDHYGLSVTVPVLIAGFGVLLVLILTFFLVIHPLGNF 683
Query: 662 WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGD 721
W ++L +T I + ++G+M + + ++ +S++ L+ + A++ C + + F +++
Sbjct: 684 W----LILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFAIDHCAPLLYTFVLATEH 739
Query: 722 -KNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 754
+ Q +K +L G ++ +T + L+G++ L F
Sbjct: 740 TRTQCIKSSLQEHGTAILQNVT-SFLIGLVPLLF 772
Score = 88 (36.0 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 36/138 (26%), Positives = 60/138 (43%)
Query: 201 FFSAIG-VKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPS 259
FF G STL+ IPF + G + L+ +R + LP + R+++A +V +
Sbjct: 280 FFITDGKYNSTLL---GIPFFAMGHGTKGVFELLSGWRRTRENLPFKDRVADAYSDVMVT 336
Query: 260 ITLASLSEVLAFAVGS--FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAED 317
T+ S + F +G+ F + A +VF + F + +VF + E
Sbjct: 337 YTMTSSLYFITFGMGASPFTNIEAVKVFCQNMCVSILLNYFYIFSFFGSCLVFAG-QLEQ 395
Query: 318 KRVDCIPCLKL-SSSYAD 334
R I C K+ S+ Y D
Sbjct: 396 NRYHSIFCCKIPSAEYLD 413
Score = 46 (21.3 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 35/124 (28%), Positives = 52/124 (41%)
Query: 364 VKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS----YL---QGYFNNISEHLRIG 416
VK V+ L++ + S C +I +L DS Y Q YF+N S IG
Sbjct: 460 VKPFVVILYLIYASFSFMGCLQISDRANIINLLASDSPSVSYAMVQQKYFSNYSPV--IG 517
Query: 417 PPLYFVVKNYNYSSESRQTNQLCS----ISQCD--------SNSLLNEISRASLIPQSSY 464
+Y ++ +N SS +LCS +S + SN N S + QSS+
Sbjct: 518 FYIYEPLEYWN-SSVQEDLRRLCSGFTAVSWVEQYYQFLKVSNISANNKSDFISVLQSSF 576
Query: 465 IAKP 468
+ KP
Sbjct: 577 LKKP 580
>WB|WBGene00004237 [details] [associations]
symbol:ptr-23 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008340 GO:GO:0018996 GO:GO:0006897
GO:GO:0040011 GO:GO:0000003 GO:GO:0045138 GO:GO:0040025
GO:GO:0008158 EMBL:Z81511 GeneTree:ENSGT00680000099845 EMBL:Z82089
PIR:T21213 RefSeq:NP_493603.1 ProteinModelPortal:G5EE13
EnsemblMetazoa:ZK270.1 GeneID:173362 KEGG:cel:CELE_ZK270.1
CTD:173362 WormBase:ZK270.1 OMA:RMEINIA NextBio:879335
Uniprot:G5EE13
Length = 983
Score = 139 (54.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 57/217 (26%), Positives = 92/217 (42%)
Query: 105 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVM-FAYIS 163
WE + V + + SK L + S+S +EEE+ R I+I YLV+ FA +
Sbjct: 274 WEMSLVDIFEKRY----NSKRLKIYAYSQSYVEEEMVRGGI-----IMIPYLVVGFAIMC 324
Query: 164 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAI----GVKSTLIIMEVIPF 219
L + + Y+ A+ GV+ I+ VIPF
Sbjct: 325 LCSCVLVMIRALYMHQENGYKIILAIMACLTPLLACATALALMFLCGVRFASILC-VIPF 383
Query: 220 LVLAVGVDNMCILVHA---VKRQQLELPLET-----RISNALVEVGPSITLASLSEVLAF 271
LVL++GVD+ +++H V + E P + R+S + EVGP+I ++ L+ + A
Sbjct: 384 LVLSIGVDSSYLMIHEWQRVTKHMRETPRKKDSVGHRMSEVMAEVGPAILISCLTNMFAD 443
Query: 272 AVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALI 308
AVGSF P + Q+T + L+
Sbjct: 444 AVGSFTSSPEITLLCTGNMLSMWFAFIYQMTFYAGLM 480
Score = 90 (36.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 27/136 (19%), Positives = 65/136 (47%)
Query: 634 DIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVS 693
D W++ L L + +VC + ++++ AI L + I ++G ++ K+ L+ ++
Sbjct: 781 DTWQSILGTLV----CMAMVCFVFLNNWFTVAIASLSVLSICAGILGFLSWWKVDLDPIT 836
Query: 694 VVNLVMAVGIAVEFCVHITHAF---SVSSGDKNQRMKEALGTMGASVFSGI--TLTKLVG 748
+ +++++G +V+ H+++ + S+ G + + + F + L+ ++
Sbjct: 837 MAAMIISIGFSVDIPAHVSYHYYQASIQEGPMSPPSSRLANCLSSVAFPALQAALSTILC 896
Query: 749 VIVLCFSR---TEVFV 761
V L F EVFV
Sbjct: 897 VCSLLFVNLYMAEVFV 912
Score = 39 (18.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/55 (23%), Positives = 31/55 (56%)
Query: 643 LAIAIGAVFVVCLITTCSFWSSAIIL--LVLTMIVVDLMGVM---AILKIQLNAV 692
L A+ + VC + + + + + + +VL +++ +L G++ AIL I L+++
Sbjct: 887 LQAALSTILCVCSLLFVNLYMAEVFVKTMVLCVVLCNLHGLVFLPAIL-ILLDSI 940
>UNIPROTKB|F6PVM2 [details] [associations]
symbol:C23H6orf138 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
OMA:CFLRRPG EMBL:DAAA02055185 EMBL:DAAA02055186 EMBL:DAAA02055187
EMBL:DAAA02055188 EMBL:DAAA02055189 EMBL:DAAA02055190
EMBL:DAAA02055191 IPI:IPI00867395 Ensembl:ENSBTAT00000028550
Uniprot:F6PVM2
Length = 904
Score = 134 (52.2 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 42/214 (19%), Positives = 103/214 (48%)
Query: 548 FLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRTYHTPLNRQIDYVNSMRAAR 605
F++ L S+ K + N + G E+ I+ + + T ++Q + + + R
Sbjct: 629 FISVLQSSFLKKPEFQHFRNDIIFSKAGDESNIIASRLYLVARTSRDKQKEVIEVLEKLR 688
Query: 606 EFSSRVSDSLQMEIFPYSVFYMYFEQY-LDIWRTALI---NLAIAIGAVFVVCLITTCSF 661
S +S S++ +F S +++ + Y L + LI + + + F + + +F
Sbjct: 689 PLS--LSKSIRFIVFNPS--FVFMDHYSLSVTVPVLIAGFGVLLVLILTFFLVIHPLGNF 744
Query: 662 WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGD 721
W ++L +T I + ++G+M + + ++ +S++ L+ A++ C + + F +++
Sbjct: 745 W----LILSVTSIELGVLGLMTLWNVDMDCISILCLIYTFNFAIDHCAPLLYTFVLATEH 800
Query: 722 -KNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 754
+ Q +K +L G ++ +T + L+G++ L F
Sbjct: 801 TRTQCIKSSLQEHGTAILQNVT-SFLIGLVPLLF 833
Score = 88 (36.0 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 36/138 (26%), Positives = 60/138 (43%)
Query: 201 FFSAIG-VKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPS 259
FF G STL+ IPF + G + L+ +R + LP + R+++A +V +
Sbjct: 341 FFITDGKYNSTLL---GIPFFAMGHGTKGVFELLSGWRRTKENLPFKDRVADAYSDVMVT 397
Query: 260 ITLASLSEVLAFAVGS--FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAED 317
T+ S + F +G+ F + A +VF + F + +VF + E
Sbjct: 398 YTMTSSLYFITFGMGASPFTNIEAVKVFCQNMCVSILLNYFYIFSFFGSCLVFAG-QLEQ 456
Query: 318 KRVDCIPCLKL-SSSYAD 334
R I C K+ S+ Y D
Sbjct: 457 NRYHSIFCCKIPSAEYLD 474
Score = 50 (22.7 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 35/124 (28%), Positives = 53/124 (42%)
Query: 364 VKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS----YL---QGYFNNISEHLRIG 416
VK V+ L++ + S C +I G +L DS Y Q YF+N S IG
Sbjct: 521 VKPFVVILYLIYASFSFMGCLQISDGANIINLLASDSPSISYAMVQQKYFSNYSPV--IG 578
Query: 417 PPLYFVVKNYNYSSESRQTNQLCS----ISQCD--------SNSLLNEISRASLIPQSSY 464
+Y ++ +N +S +LCS +S + SN N S + QSS+
Sbjct: 579 FYVYEPLEYWN-NSVQEDLRRLCSGFTAVSWVEQYYQFLKVSNISANNKSDFISVLQSSF 637
Query: 465 IAKP 468
+ KP
Sbjct: 638 LKKP 641
>UNIPROTKB|Q6ZW05 [details] [associations]
symbol:PTCHD4 "Patched domain-containing protein 4"
species:9606 "Homo sapiens" [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
EMBL:CH471081 GO:GO:0008158 EMBL:AL161622 HOGENOM:HOG000049274
HOVERGEN:HBG080559 EMBL:AL139336 EMBL:AL121973 EMBL:AL353138
EMBL:AK123835 EMBL:AK299301 IPI:IPI00879247 RefSeq:NP_001013754.3
RefSeq:NP_997382.2 UniGene:Hs.659409 ProteinModelPortal:Q6ZW05
PhosphoSite:Q6ZW05 DMDM:269849699 PRIDE:Q6ZW05
Ensembl:ENST00000339488 GeneID:442213 KEGG:hsa:442213
UCSC:uc011dwm.2 CTD:442213 GeneCards:GC06M047845 HGNC:HGNC:21345
HPA:HPA041276 neXtProt:NX_Q6ZW05 PharmGKB:PA134982541
eggNOG:NOG242733 InParanoid:Q6ZW05 OMA:CFLRRPG OrthoDB:EOG43TZTT
GenomeRNAi:442213 NextBio:110853 ArrayExpress:Q6ZW05 Bgee:Q6ZW05
CleanEx:HS_C6orf138 Genevestigator:Q6ZW05 Uniprot:Q6ZW05
Length = 846
Score = 130 (50.8 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 42/214 (19%), Positives = 102/214 (47%)
Query: 548 FLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRTYHTPLNRQIDYVNSMRAAR 605
F++ L S+ K + N + G E+ I+ + + T ++Q + + R
Sbjct: 571 FISVLQSSFLKKPEFQHFRNDIIFSKAGDESNIIASRLYLVARTSRDKQKEITEVLEKLR 630
Query: 606 EFSSRVSDSLQMEIFPYSVFYMYFEQY-LDIWRTALI---NLAIAIGAVFVVCLITTCSF 661
S +S S++ +F S +++ + Y L + LI + + + F + + +F
Sbjct: 631 PLS--LSKSIRFIVFNPS--FVFMDHYSLSVTVPVLIAGFGVLLVLILTFFLVIHPLGNF 686
Query: 662 WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGD 721
W ++L +T I + ++G+M + + ++ +S++ L+ + A++ C + F +++
Sbjct: 687 W----LILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFAIDHCAPLLFTFVLATEH 742
Query: 722 -KNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 754
+ Q +K +L G ++ +T + L+G++ L F
Sbjct: 743 TRTQCIKSSLQDHGTAILQNVT-SFLIGLVPLLF 775
Score = 89 (36.4 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 37/138 (26%), Positives = 60/138 (43%)
Query: 201 FFSAIG-VKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPS 259
FF G STL+ IPF + G + L+ +R + LP + RI++A +V +
Sbjct: 283 FFITDGKYNSTLL---GIPFFAMGHGTKGVFELLSGWRRTKENLPFKDRIADAYSDVMVT 339
Query: 260 ITLASLSEVLAFAVGS--FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAED 317
T+ S + F +G+ F + A +VF + F + +VF + E
Sbjct: 340 YTMTSSLYFITFGMGASPFTNIEAVKVFCQNMCVSILLNYFYIFSFFGSCLVFAG-QLEQ 398
Query: 318 KRVDCIPCLKL-SSSYAD 334
R I C K+ S+ Y D
Sbjct: 399 NRYHSIFCCKIPSAEYLD 416
Score = 51 (23.0 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 36/124 (29%), Positives = 53/124 (42%)
Query: 364 VKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS----YL---QGYFNNISEHLRIG 416
VK V+ L++ + S C +I G +L DS Y Q YF+N S IG
Sbjct: 463 VKPFVVILYLIYASFSFMGCLQISDGANIINLLASDSPSVSYAMVQQKYFSNYSPV--IG 520
Query: 417 PPLYFVVKNYNYSSESRQTNQLCS----ISQCD--------SNSLLNEISRASLIPQSSY 464
+Y ++ +N SS +LCS +S + SN N S + QSS+
Sbjct: 521 FYVYEPLEYWN-SSVQDDLRRLCSGFTAVSWVEQYYQFLKVSNVSANNKSDFISVLQSSF 579
Query: 465 IAKP 468
+ KP
Sbjct: 580 LKKP 583
>MGI|MGI:1920485 [details] [associations]
symbol:Ptchd4 "patched domain containing 4" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:1920485
GO:GO:0016021 GO:GO:0008158 HOGENOM:HOG000049274 HOVERGEN:HBG080559
OrthoDB:EOG43TZTT EMBL:BC151166 IPI:IPI00466226 UniGene:Mm.390999
ProteinModelPortal:B9EKX1 UCSC:uc012ato.1 eggNOG:NOG306574
Genevestigator:B9EKX1 Uniprot:B9EKX1
Length = 904
Score = 138 (53.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 47/227 (20%), Positives = 108/227 (47%)
Query: 535 RPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRTYHTPLN 592
+ S I K F++ L S+ K + N + G EN I+ + + T +
Sbjct: 617 KTSNISANNKTD-FISVLQSSFLKKPEFQHFRNDIIFSRAGDENNIIASRLYLVARTSRD 675
Query: 593 RQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQY-LDIWRTALI---NLAIAIG 648
+Q + + + R S +S S++ +F S +++ + Y L + LI + + +
Sbjct: 676 KQKEVIEVLDKLRPLS--LSKSIRFIVFNPS--FVFTDHYSLSVTVPVLIAGFGVLLVLI 731
Query: 649 AVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFC 708
F + + +FW ++L +T I + ++G+M + + ++ +S++ L+ + A++ C
Sbjct: 732 LTFFLVIHPLGNFW----LILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFAIDHC 787
Query: 709 VHITHAFSVSSGD-KNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 754
+ + F +++ + Q +K +L G ++ IT + L+G++ L F
Sbjct: 788 APLLYTFVLATEHTRTQCIKSSLQEHGTAILQNIT-SFLIGLLPLLF 833
Score = 87 (35.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 201 FFSAIG-VKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPS 259
FF G STL+ IPF + G + L+ +R + LP + R+++A +V +
Sbjct: 341 FFITDGKYNSTLL---GIPFFAMGHGTKGVFELLSGWRRTKENLPFKDRVADAYSDVMVT 397
Query: 260 ITLASLSEVLAFAVGS--FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAED 317
T+ S + F +G+ F + A ++F + F + +VF + E
Sbjct: 398 YTMTSSLYFITFGMGASPFTNIEAVKIFCQNMCVSILLNYFYIFSFFGSCLVFAG-QLEQ 456
Query: 318 KRVDCIPCLKL-SSSYAD 334
R I C K+ S+ Y D
Sbjct: 457 NRYHSIFCCKIPSAEYLD 474
>WB|WBGene00004218 [details] [associations]
symbol:ptr-3 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0040002 "collagen and cuticulin-based cuticle development"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 GO:GO:0040018
GO:GO:0019915 GO:GO:0040002 GO:GO:0040025 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080319 PIR:T28706
RefSeq:NP_493718.1 ProteinModelPortal:O16530 PaxDb:O16530
EnsemblMetazoa:C41D7.2 GeneID:173426 KEGG:cel:CELE_C41D7.2
UCSC:C41D7.2 CTD:173426 WormBase:C41D7.2 eggNOG:NOG267556
HOGENOM:HOG000017328 InParanoid:O16530 OMA:EIQLFSI NextBio:879611
Uniprot:O16530
Length = 914
Score = 141 (54.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 122 QSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 181
QS+++ + ++S I EE+ R +VI + +M + S+T P L+
Sbjct: 262 QSEHINVYILTDSYITEEIVRAGLTLLPFLVIGFTIMAVFSSITF--VPILAVM------ 313
Query: 182 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR--- 238
FF IG + I+ V PFLVLA+GVD+ ++ +A +R
Sbjct: 314 ---ACVCPFMACGASLGAMFF--IGFRFGSILC-VTPFLVLAIGVDDSYLMANAWQRITC 367
Query: 239 --------QQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXX 290
+ + + L+ RI+ +E GPSIT+ +++ LAF +G+ P ++FS+
Sbjct: 368 HRRKHARFESVNVELKNRITEMFIETGPSITITTITNALAFGIGATTPAAEIQLFSIGNA 427
Query: 291 XXXXXXXXXQITAFVALI 308
IT + AL+
Sbjct: 428 LAVITDFVFTITFYGALM 445
Score = 83 (34.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 38/168 (22%), Positives = 75/168 (44%)
Query: 595 IDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGA-VFVV 653
+D+ N + E+ S V+D + + +V Y ++LD+ T + +AI F
Sbjct: 691 VDWSNRAKLLNEWRS-VADQDKFKSLNVTV-YEEDAKFLDLIET-MSPVAIQSALWTFAS 747
Query: 654 CLITTCSFWSSAIILLVLTMIVVDL-MGVMAILK---IQLNAVSVVNLVMAVGIAVEFCV 709
+ F S L V T ++ +GV I+ L+ + + VM++G +V+
Sbjct: 748 MFLVAALFISHPPTLFVATFSILSTSLGVFGIMSWWGADLDPIMMSATVMSIGFSVDIPS 807
Query: 710 HITHAF---SVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 754
H+++ F + + D +R++ + +G +F T L V+ L F
Sbjct: 808 HVSYHFYQTAKDTSDIRRRLQMTIEAVGFPIFEASLSTSLC-VMSLFF 854
>UNIPROTKB|Q3KNS1 [details] [associations]
symbol:PTCHD3 "Patched domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007286 "spermatid development" evidence=NAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0007286 GO:GO:0008158 eggNOG:NOG149152 EMBL:AK126025
EMBL:AL355493 EMBL:BC107139 IPI:IPI00418990 RefSeq:NP_001030014.2
UniGene:Hs.631832 ProteinModelPortal:Q3KNS1 IntAct:Q3KNS1
STRING:Q3KNS1 PhosphoSite:Q3KNS1 DMDM:160419230 PRIDE:Q3KNS1
Ensembl:ENST00000438700 Ensembl:ENST00000570930 GeneID:374308
KEGG:hsa:374308 CTD:374308 GeneCards:GC10M027728 H-InvDB:HIX0008737
H-InvDB:HIX0026004 HGNC:HGNC:24776 HPA:HPA044613 MIM:611791
neXtProt:NX_Q3KNS1 PharmGKB:PA142671117 HOGENOM:HOG000115764
HOVERGEN:HBG082604 InParanoid:Q3KNS1 OMA:FMNNIPD OrthoDB:EOG4TQM8H
GenomeRNAi:374308 NextBio:100150 Bgee:Q3KNS1 CleanEx:HS_PTCHD3
Genevestigator:Q3KNS1 Uniprot:Q3KNS1
Length = 767
Score = 172 (65.6 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 63/250 (25%), Positives = 110/250 (44%)
Query: 205 IGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLAS 264
IGV +I+ PFL+L VGVD+M I++ A + L + R+SN + SIT+ +
Sbjct: 436 IGVPFVIIVANS-PFLILGVGVDDMFIMISAWHKTNLADDIRERMSNVYSKAAVSITITT 494
Query: 265 LSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIP 324
++ +LA G + + F + IT F A + D R V C+
Sbjct: 495 ITNILALYTGIMSSFRSVQCFCIYTGMTLLFCYFYNITCFGAFMALDGKR----EVVCLC 550
Query: 325 CLKLSSSYADSDK-------GIGQRKPGL----LARYMKEVHATILSLWGVKIAVISLFV 373
LK + S K G + G ++ + ++ L+ K V+ ++V
Sbjct: 551 WLKKADPKWPSFKKFCCFPFGSVPDEHGTDIHPISLFFRDYFGPFLTRSESKYFVVFIYV 610
Query: 374 AFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLR-IGPPLYFVV-KNYNY-SS 430
+ ++SI C ++ GL+ + + DSY+ YFN + GP + +V K +Y
Sbjct: 611 LYIISSIYGCFHVQEGLDLRNLASDDSYITPYFNVEENYFSDYGPRVMVIVTKKVDYWDK 670
Query: 431 ESRQTNQLCS 440
+ RQ + C+
Sbjct: 671 DVRQKLENCT 680
>RGD|1563020 [details] [associations]
symbol:Ptchd4 "patched domain containing 4" species:10116
"Rattus norvegicus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
RGD:1563020 GO:GO:0016021 GO:GO:0008158
GeneTree:ENSGT00680000099845 OrthoDB:EOG43TZTT IPI:IPI00371765
Ensembl:ENSRNOT00000016940 UCSC:RGD:1563020 Uniprot:D3ZRK8
Length = 829
Score = 135 (52.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 47/226 (20%), Positives = 104/226 (46%)
Query: 535 RPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRTYHTPLN 592
+ S I K F++ L S+ K + N + G EN I+ + + T +
Sbjct: 542 KASNISANNKTD-FISVLQSSFLKKPEFQHFRNDIIFSRAGDENNIIASRLYLVARTSRD 600
Query: 593 RQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALI---NLAIAIGA 649
+Q + + + R S +S S++ +F S F L + LI + + +
Sbjct: 601 KQKEVIEVLDKLRPLS--LSKSIRFIVFNPS-FVFTDHNSLSVTVPVLIAGFGVLLVLVL 657
Query: 650 VFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCV 709
F + + +FW ++L +T I + ++G+M + + ++ +S++ L+ + A++ C
Sbjct: 658 TFFLVIHPLGNFW----LILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFAIDHCA 713
Query: 710 HITHAFSVSSGD-KNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 754
+ + F +++ + Q +K +L G ++ IT + L+G++ L F
Sbjct: 714 PLLYTFVLATEHTRTQCIKSSLQEHGTAILQNIT-SFLIGLVPLLF 758
Score = 88 (36.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 56/264 (21%), Positives = 104/264 (39%)
Query: 79 ASAFVVTYPVNNAVDREGNETKKAVA--WEKAFVQLAKDELLPMVQSKNLTLAFSSESSI 136
A A +TY + G+ T+ + WE F QL + +L + ++L L + S+
Sbjct: 153 ARAIQITYYLQTY----GSATQDLIGEKWENEFCQLMR-KLQD--EHQDLQLYSLASFSL 205
Query: 137 EEELKRESTADAITIVISYLVMF--AYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXX 194
+ + S +++S +++ A +S ++ D F
Sbjct: 206 WRDFHKTSILTRSKVLVSLVLILTTATLSSSMKDCLRSKPFL------GLLGVLTVCISI 259
Query: 195 XXXXXXFFSAIG-VKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNAL 253
FF G STL+ IPF + G + L+ +R + LP + R+++A
Sbjct: 260 ATAAGIFFITDGKYNSTLL---GIPFFAMGHGTKGVFELLSGWRRTKENLPFKDRVADAY 316
Query: 254 VEVGPSITLASLSEVLAFAVGS--FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFD 311
+V + T+ S + F +G+ F + A ++F + F + +VF
Sbjct: 317 SDVMVTYTMTSSLYFITFGMGASPFTNIEAVKIFCQNMCVSILLNYFYIFSFFGSCLVFA 376
Query: 312 FLRAEDKRVDCIPCLKL-SSSYAD 334
+ E R I C K+ S+ Y D
Sbjct: 377 G-QLEQNRYHSIFCCKIPSAEYLD 399
>UNIPROTKB|E1BW67 [details] [associations]
symbol:C6orf138 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845 CTD:442213
OMA:CFLRRPG EMBL:AADN02018183 IPI:IPI00594580 RefSeq:NP_001182491.1
UniGene:Gga.10364 Ensembl:ENSGALT00000026991 GeneID:422064
KEGG:gga:422064 NextBio:20824750 Uniprot:E1BW67
Length = 887
Score = 128 (50.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 42/214 (19%), Positives = 102/214 (47%)
Query: 548 FLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRTYHTPLNRQIDYVNSMRAAR 605
F++ L S K + N + G EN I+ + + T N Q + V + R
Sbjct: 612 FISILQSNFLKKPEFQHFKNDIIFSKAGDENNIIASRLYLVARTSENTQREAVELLEKLR 671
Query: 606 EFSSRVSDSLQMEIFPYSVFYMYFEQY-LDIWRTALIN---LAIAIGAVFVVCLITTCSF 661
S + S++ +F + +++ + Y L + LI+ + + + F + + +F
Sbjct: 672 PLS--LIQSIKFIVF--NPTFVFMDHYGLSVTMPVLISGFGILLVLILTFFLVIHPLGNF 727
Query: 662 WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGD 721
W ++L +T I + ++G+M + + ++ +S++ L+ + A++ C + + F +++
Sbjct: 728 W----LILSVTSIELGVLGLMTLWNVDMDWISILCLIYTLNFAIDHCAPLLYTFVLATEH 783
Query: 722 -KNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 754
+ Q +K +L G ++ ++ + L+G++ L F
Sbjct: 784 TRTQCIKNSLQEHGTAILQNVS-SFLIGLVPLLF 816
Score = 95 (38.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 38/138 (27%), Positives = 61/138 (44%)
Query: 201 FFSAIG-VKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPS 259
FF G STL+ IPF + G + L+ +R + LP + R+++A +V S
Sbjct: 324 FFITDGKYNSTLL---GIPFFAMGHGTKGVFELLSGWRRTRENLPFKDRVADAYSDVMVS 380
Query: 260 ITLASLSEVLAFAVGS--FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAED 317
T+ S +AF +G+ F + A +VF + F + +VF + E
Sbjct: 381 YTMTSSLYFIAFGMGASPFTNIEAVKVFCQNMCVSILLNYFYIFSFFGSCLVFAG-QLEQ 439
Query: 318 KRVDCIPCLKL-SSSYAD 334
R I C K+ S+ Y D
Sbjct: 440 NRYHSIFCCKIPSAEYLD 457
>WB|WBGene00004235 [details] [associations]
symbol:ptr-21 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
EMBL:FO081483 GeneTree:ENSGT00680000099845 RefSeq:NP_490751.1
ProteinModelPortal:Q9N2Z6 PaxDb:Q9N2Z6 EnsemblMetazoa:Y65B4BR.3
GeneID:191752 KEGG:cel:CELE_Y65B4BR.3 UCSC:Y65B4BR.3 CTD:191752
WormBase:Y65B4BR.3 eggNOG:NOG295827 HOGENOM:HOG000017683
InParanoid:Q9N2Z6 OMA:FESMEKC NextBio:950216 Uniprot:Q9N2Z6
Length = 909
Score = 119 (46.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/227 (18%), Positives = 86/227 (37%)
Query: 83 VVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKR 142
V+T PV + V R +T K WE A A + + ++ E+ +
Sbjct: 227 VLTLPVLSEV-RTFEDTDKLNKWELAVYNYATGYSALEGDDHLVEINVIGAEVVDTEMNK 285
Query: 143 ESTADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFF 202
++ ++ + M +I T+ + ++
Sbjct: 286 DAQKMVPYFIVGIVSMIIFIFCTVSISASYYGYFSWRIGLIALACLLVPILAILTAFGIN 345
Query: 203 SAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITL 262
+ +G ++ +M ++PFL+ +GV++ + + + +LP R+ L E GPSIT
Sbjct: 346 NMLGNRTNSPMM-IMPFLINGIGVNDAFLTLQNWLQHSPDLPSGKRLGYMLAEAGPSITT 404
Query: 263 ASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQITAFVALIV 309
+L+ V+ F +G P +F + +T F ++V
Sbjct: 405 TTLTNVIVFLIGWMNPTEEMSIFCLGCAISLLLAYVYTLTFFCPVLV 451
Score = 101 (40.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/113 (17%), Positives = 58/113 (51%)
Query: 605 REFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSS 664
+++ + S + + + ++V M+ +Q L + A+ N + +G + VC++ + S
Sbjct: 665 QDWRTIASSHVALNVSVWNVNAMFVDQMLSLKGLAISNALVTLGCMAAVCVVFIRNPLSV 724
Query: 665 AIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSV 717
+ + I + + G + + L+ V++ +++++G++V+F H+ + V
Sbjct: 725 GLATASILSISIGVTGYLCFWDLDLDPVTLCAVIVSIGMSVDFVAHVACHYQV 777
>UNIPROTKB|G3N0B8 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] InterPro:IPR003392 Pfam:PF02460
GO:GO:0016020 GO:GO:0008158 GeneTree:ENSGT00680000099777
EMBL:DAAA02024005 Ensembl:ENSBTAT00000065176 Uniprot:G3N0B8
Length = 384
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 42/111 (37%), Positives = 57/111 (51%)
Query: 682 MAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGI 741
M ++ I+L+AV VV L+ +VGI VEF VH+ AF + GDKN+R AL M A V G
Sbjct: 1 MGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGA 60
Query: 742 TLTKLVGVIVLCFSRTEVFVVYYFQMYXXXXXXXXXXXXXXXXXXXSVFGP 792
T L+GV++L S + V Y+F + S FGP
Sbjct: 61 VST-LLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGP 110
>WB|WBGene00004219 [details] [associations]
symbol:ptr-4 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0045138 "tail tip morphogenesis" evidence=IMP]
[GO:0006897 "endocytosis" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
GO:GO:0010171 GO:GO:0040011 GO:GO:0040018 GO:GO:0000003
GO:GO:0045138 GO:GO:0043652 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080451 RefSeq:NP_509013.2
ProteinModelPortal:Q95YD0 STRING:Q95YD0 PaxDb:Q95YD0
EnsemblMetazoa:C45B2.7 GeneID:180876 KEGG:cel:CELE_C45B2.7
UCSC:C45B2.7 CTD:180876 WormBase:C45B2.7 eggNOG:NOG268725
HOGENOM:HOG000020423 InParanoid:Q95YD0 OMA:TIAPSSM NextBio:911372
Uniprot:Q95YD0
Length = 960
Score = 113 (44.8 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 34/127 (26%), Positives = 68/127 (53%)
Query: 647 IGAVFVVCLITTCSFWSSAIILLVLTMIVVDL-MGV---MAILKIQLNAVSVVNLVMAVG 702
IG+ + + + F A + ++T ++ + MGV +A+L L++VS+ +VMA+G
Sbjct: 790 IGSALAMMALISFFFLPDAQSVFLMTFSLLSISMGVCGGLALLGSDLDSVSMGCIVMAIG 849
Query: 703 IAVEFCVHITHAFSVSSGDKNQ-RMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFV 761
+AV++ VHI + + S Q ++ + L ++G V + T LVG+ + F +
Sbjct: 850 LAVDYSVHICYRYHRSEYKTAQEKVADTLASVGWPVTQAVCST-LVGLAITVFVPAYLVR 908
Query: 762 VYYFQMY 768
V++ +Y
Sbjct: 909 VFFQTVY 915
Score = 105 (42.0 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 213 IMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFA 272
+ +PFLVLAVGVD+ +++ A + + R+ + + G SIT+ S + F
Sbjct: 402 VTSTMPFLVLAVGVDDDFLMMAAWRECDRKHSPAIRLGFVMADAGASITVTSFTNFFCFF 461
Query: 273 VGSFI-PMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAE 316
+G F+ PA F + QIT + A++ + R E
Sbjct: 462 LGWFMCSTPAVADFCIITAAGVFFDYLMQITFYAAILKYSGDREE 506
Score = 41 (19.5 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 349 RYMKEVHAT-ILSLWGVKIAVISLFVAFTLASIALCT 384
++ ++ A ++ W V++A ++LF +T +I C+
Sbjct: 561 QFFRDTFAPFVMKKW-VRVASLALFPIYTAFAIYGCS 596
>UNIPROTKB|I3LPG5 [details] [associations]
symbol:PTCHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
Ensembl:ENSSSCT00000024311 OMA:ASHHEAN Uniprot:I3LPG5
Length = 539
Score = 140 (54.3 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 43/214 (20%), Positives = 104/214 (48%)
Query: 548 FLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRTYHTPLNRQIDYVNSMRAAR 605
F++ L S+ K + N + G EN I+ + + T ++Q + + + R
Sbjct: 264 FISVLQSSFLKKPEFQHFRNDIIFSKAGDENNIIASRLYLVARTSRDKQKEVIEVLEKLR 323
Query: 606 EFSSRVSDSLQMEIFPYSVFYMYFEQY-LDIWRTALI---NLAIAIGAVFVVCLITTCSF 661
S +S S++ +F S +++ + Y L + LI + + + F + + +F
Sbjct: 324 PLS--LSKSIRFIVFNPS--FVFMDHYGLSVTVPVLIAGFGVLLVLILTFFLVIHPLGNF 379
Query: 662 WSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGD 721
W ++L +T I + ++G+M + + ++ +S++ L+ + A++ C + + F +++
Sbjct: 380 W----LILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFAIDHCAPLLYTFVLATEH 435
Query: 722 -KNQRMKEALGTMGASVFSGITLTKLVGVIVLCF 754
+ Q +K +L G ++ +T + L+G++ L F
Sbjct: 436 TRTQCIKTSLQEHGTAILQNVT-SFLIGLVPLLF 468
Score = 57 (25.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 26/114 (22%), Positives = 47/114 (41%)
Query: 222 LAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPA 281
L G + L+ +R + LP + R+++A +V + T+ S + F +G A
Sbjct: 3 LGHGTKGVFELLSGWRRTKENLPFKDRVADAYSDVMVTYTMTSSLYFITFGMG------A 56
Query: 282 CRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAEDKRVDCIPCLKL-SSSYAD 334
++F + F + +VF + E R I C K+ S+ Y D
Sbjct: 57 SQIFCQNMCVSILLNYFYIFSFFGSCLVFAG-QLEQNRYHSIFCCKIPSAEYLD 109
Score = 46 (21.3 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 35/124 (28%), Positives = 52/124 (41%)
Query: 364 VKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDS----YL---QGYFNNISEHLRIG 416
VK V+ L++ + S C +I +L DS Y Q YF+N S IG
Sbjct: 156 VKPFVVILYLIYASFSFMGCLQISDRANIINLLASDSPSVSYAMVQQKYFSNYSPV--IG 213
Query: 417 PPLYFVVKNYNYSSESRQTNQLCS----ISQCD--------SNSLLNEISRASLIPQSSY 464
+Y ++ +N SS +LCS +S + SN N S + QSS+
Sbjct: 214 FYIYEPLEYWN-SSVQEDLRRLCSGFTAVSWVEQYYQFLKVSNISANNKSDFISVLQSSF 272
Query: 465 IAKP 468
+ KP
Sbjct: 273 LKKP 276
>UNIPROTKB|Q8EDZ6 [details] [associations]
symbol:SO_2594 "MMPL family efflux pump" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000731
InterPro:IPR004869 Pfam:PF03176 PROSITE:PS50156 GO:GO:0016021
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000221695
KO:K07003 ProtClustDB:CLSK867741 OMA:FNEGNPK RefSeq:NP_718180.1
ProteinModelPortal:Q8EDZ6 GeneID:1170296 KEGG:son:SO_2594
PATRIC:23524815 Uniprot:Q8EDZ6
Length = 771
Score = 128 (50.1 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 40/113 (35%), Positives = 66/113 (58%)
Query: 648 GAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV-MAVGIAVE 706
GAVFV+CLI+ SF ++ +++ L ++ +M +L I L AVS + ++ + VGI V+
Sbjct: 623 GAVFVLCLISFKSFKATVAVIIPLYVVSTLAQALMTMLNIGL-AVSTLPVIALGVGIGVD 681
Query: 707 FCVHITHAFS--VSSG-DKNQRMKEALGTMGASV-FSGITLTKLVGVIVLCFS 755
+ ++I S +S+G Q EAL G++V F+G+TL +GV FS
Sbjct: 682 YGIYILSTMSSKLSNGMPVQQAYYEALVERGSAVIFTGLTLA--IGVSTWFFS 732
Score = 64 (27.6 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 216 VIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSIT--LASLSEVLAFAV 273
++PFLV A+GV + +++AVKR+ ++ T+ ++A + +A LS+ + F
Sbjct: 284 LVPFLVFAIGVSHGVQIINAVKRRVMD-GQSTKAASASAFRSLLVPGGVALLSDTVGFIT 342
Query: 274 GSFIPMPACR 283
FI + R
Sbjct: 343 LLFIDIGIIR 352
Score = 46 (21.3 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 22/101 (21%), Positives = 43/101 (42%)
Query: 353 EVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEH 412
EV A + + K A + +A+IAL GLE+ + + LQG + +
Sbjct: 394 EVRAEAIWRYLAKFATPKYAIVVIIATIALYFA---GLEKANQM-KIGDLQGGAPALHQD 449
Query: 413 LRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEI 453
R +F+ +++ +++ S C + +LN+I
Sbjct: 450 SRYNLDTFFITDHFSITTDVMTVIVEASPEACTYHDVLNQI 490
Score = 39 (18.8 bits), Expect = 0.00094, Sum P(4) = 0.00094
Identities = 20/108 (18%), Positives = 45/108 (41%)
Query: 127 TLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGD-TPHLSSFYIXXXXXXXX 185
T+AF+++ +E+EL+ + D + I +++ FA ++ + D + F++
Sbjct: 187 TIAFAAQ--LEKELRGKYETDKVKI---HIIGFAKMAGDVADGAKGVLLFFVIAILVTAA 241
Query: 186 XXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILV 233
++ +I ++ V+ G+D M ILV
Sbjct: 242 MVYLFSKSIILTLLPLICSLAA----VIWQLGLLTVIGFGLDPMSILV 285
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 48 YTSTESCMSAFKGPLDPSTALGGFSGNNYSEA 79
+ +TE+ ++ + ++ + +G N+YS A
Sbjct: 137 FATTETGLNTVRDNIEKAGIVGRLIANDYSAA 168
>TIGR_CMR|SO_2594 [details] [associations]
symbol:SO_2594 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000731 InterPro:IPR004869 Pfam:PF03176 PROSITE:PS50156
GO:GO:0016021 EMBL:AE014299 GenomeReviews:AE014299_GR
HOGENOM:HOG000221695 KO:K07003 ProtClustDB:CLSK867741 OMA:FNEGNPK
RefSeq:NP_718180.1 ProteinModelPortal:Q8EDZ6 GeneID:1170296
KEGG:son:SO_2594 PATRIC:23524815 Uniprot:Q8EDZ6
Length = 771
Score = 128 (50.1 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 40/113 (35%), Positives = 66/113 (58%)
Query: 648 GAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLV-MAVGIAVE 706
GAVFV+CLI+ SF ++ +++ L ++ +M +L I L AVS + ++ + VGI V+
Sbjct: 623 GAVFVLCLISFKSFKATVAVIIPLYVVSTLAQALMTMLNIGL-AVSTLPVIALGVGIGVD 681
Query: 707 FCVHITHAFS--VSSG-DKNQRMKEALGTMGASV-FSGITLTKLVGVIVLCFS 755
+ ++I S +S+G Q EAL G++V F+G+TL +GV FS
Sbjct: 682 YGIYILSTMSSKLSNGMPVQQAYYEALVERGSAVIFTGLTLA--IGVSTWFFS 732
Score = 64 (27.6 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 216 VIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSIT--LASLSEVLAFAV 273
++PFLV A+GV + +++AVKR+ ++ T+ ++A + +A LS+ + F
Sbjct: 284 LVPFLVFAIGVSHGVQIINAVKRRVMD-GQSTKAASASAFRSLLVPGGVALLSDTVGFIT 342
Query: 274 GSFIPMPACR 283
FI + R
Sbjct: 343 LLFIDIGIIR 352
Score = 46 (21.3 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 22/101 (21%), Positives = 43/101 (42%)
Query: 353 EVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEH 412
EV A + + K A + +A+IAL GLE+ + + LQG + +
Sbjct: 394 EVRAEAIWRYLAKFATPKYAIVVIIATIALYFA---GLEKANQM-KIGDLQGGAPALHQD 449
Query: 413 LRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEI 453
R +F+ +++ +++ S C + +LN+I
Sbjct: 450 SRYNLDTFFITDHFSITTDVMTVIVEASPEACTYHDVLNQI 490
Score = 39 (18.8 bits), Expect = 0.00094, Sum P(4) = 0.00094
Identities = 20/108 (18%), Positives = 45/108 (41%)
Query: 127 TLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGD-TPHLSSFYIXXXXXXXX 185
T+AF+++ +E+EL+ + D + I +++ FA ++ + D + F++
Sbjct: 187 TIAFAAQ--LEKELRGKYETDKVKI---HIIGFAKMAGDVADGAKGVLLFFVIAILVTAA 241
Query: 186 XXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILV 233
++ +I ++ V+ G+D M ILV
Sbjct: 242 MVYLFSKSIILTLLPLICSLAA----VIWQLGLLTVIGFGLDPMSILV 285
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 48 YTSTESCMSAFKGPLDPSTALGGFSGNNYSEA 79
+ +TE+ ++ + ++ + +G N+YS A
Sbjct: 137 FATTETGLNTVRDNIEKAGIVGRLIANDYSAA 168
>MGI|MGI:2135958 [details] [associations]
symbol:Scap "SREBF chaperone" species:10090 "Mus musculus"
[GO:0001666 "response to hypoxia" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0008202
"steroid metabolic process" evidence=IEA] [GO:0008203 "cholesterol
metabolic process" evidence=IDA] [GO:0015485 "cholesterol binding"
evidence=TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019217 "regulation of
fatty acid metabolic process" evidence=IDA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0032868 "response to insulin stimulus"
evidence=IMP] [GO:0032933 "SREBP signaling pathway" evidence=ISO]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IMP] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045540 "regulation of cholesterol biosynthetic
process" evidence=IMP] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2135958
GO:GO:0016021 GO:GO:0043234 GO:GO:0012507 GO:GO:0000139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0007568 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0015485 GO:GO:0032868
GO:GO:0045540 CTD:22937 eggNOG:NOG264568 HOGENOM:HOG000230538
HOVERGEN:HBG019538 InterPro:IPR026964 PANTHER:PTHR22844:SF6
OMA:CLPPAKP OrthoDB:EOG42Z4PB ChiTaRS:SCAP EMBL:AK172912
EMBL:AK146658 EMBL:AK150275 EMBL:AK152478 EMBL:AK153330
EMBL:BC051066 EMBL:BC055472 EMBL:BC069955 EMBL:BC070437
EMBL:BC072633 IPI:IPI00856221 RefSeq:NP_001001144.2
RefSeq:NP_001096632.1 UniGene:Mm.288741 ProteinModelPortal:Q6GQT6
SMR:Q6GQT6 STRING:Q6GQT6 PhosphoSite:Q6GQT6 PaxDb:Q6GQT6
PRIDE:Q6GQT6 Ensembl:ENSMUST00000098350 GeneID:235623
KEGG:mmu:235623 UCSC:uc009rtw.2 GeneTree:ENSGT00390000000003
InParanoid:Q6GQT6 NextBio:382797 Bgee:Q6GQT6 CleanEx:MM_SCAP
Genevestigator:Q6GQT6 Uniprot:Q6GQT6
Length = 1276
Score = 141 (54.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 50/227 (22%), Positives = 96/227 (42%)
Query: 109 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 167
F+ + L+ + S N +L +E+ + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLSSLRARLMLLHPSPNCSLR--AENLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 168 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 227
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 228 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
N+ +L +V ++L ++ RI+ L SI + +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNAATELGIILIGYFTLVPAIQEFCL 419
Query: 288 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRV---DCIPCLK 327
Q+ F ++ D R E +KR+ C+P K
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPESCLPSAK 466
>ZFIN|ZDB-GENE-041001-178 [details] [associations]
symbol:ptchd4 "patched domain containing 4"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 ZFIN:ZDB-GENE-041001-178 GO:GO:0016021
GO:GO:0008158 GeneTree:ENSGT00680000099845 EMBL:BX088599
Ensembl:ENSDART00000022572 Bgee:G1K2E6 Uniprot:G1K2E6
Length = 916
Score = 103 (41.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 39/186 (20%), Positives = 88/186 (47%)
Query: 573 GYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIF-PYSVFY-MYFE 630
G E I+ + + T + + V + R S + +S++ +F P VF Y
Sbjct: 658 GAEYDIIASKMYLVARTTEKTREEVVELLERLRPLS--LINSIKFIVFNPTFVFMDRYSS 715
Query: 631 QYLD-IWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQL 689
+ I + L I I F+V + +FW ++L +T + + ++G+M + + +
Sbjct: 716 SIISPILTSGFSVLTILILTFFLV-INPLGNFW----LILTVTSVELGVLGLMTLWNVDM 770
Query: 690 NAVSVVNLVMAVGIAVEFCVHITHAFSVSSGD-KNQRMKEALGTMGASVFSGITLTKLVG 748
+++S++ L+ + A++ C + F +++ + Q +K +L GA++ T ++G
Sbjct: 771 DSISILCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQN-TSCFVIG 829
Query: 749 VIVLCF 754
++ L F
Sbjct: 830 IMPLLF 835
Score = 86 (35.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/138 (23%), Positives = 60/138 (43%)
Query: 201 FFSAIG-VKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPS 259
FF + G STL+ IPF + G + L+ +R + LP + R+++A +V
Sbjct: 343 FFISDGKFNSTLL---GIPFFAMGHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVC 399
Query: 260 ITLASLSEVLAFAVGS--FIPMPACRVFSMXXXXXXXXXXXXQITAFVALIVFDFLRAED 317
T+ S ++ F +G+ F + + +VF + + + +VF + E
Sbjct: 400 YTMTSSLYIITFGMGASPFTNIESVKVFCQSMCVAVLVNYFYVFSFYGSCLVFAG-QLEQ 458
Query: 318 KRVDCIPCLKLSS-SYAD 334
R + C K+ S Y D
Sbjct: 459 NRYHSVFCCKIPSVEYLD 476
>UNIPROTKB|Q12770 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9606 "Homo sapiens"
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0032868 "response to insulin stimulus" evidence=IEA]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0045541 "negative
regulation of cholesterol biosynthetic process" evidence=NAS]
[GO:0005794 "Golgi apparatus" evidence=NAS] [GO:0051082 "unfolded
protein binding" evidence=NAS] [GO:0005783 "endoplasmic reticulum"
evidence=NAS] [GO:0032933 "SREBP signaling pathway" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0045716
"positive regulation of low-density lipoprotein particle receptor
biosynthetic process" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_111217 InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0005783 GO:GO:0016021 GO:GO:0005794
GO:GO:0043234 GO:GO:0012507 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0007568 GO:GO:0051082 GO:GO:0001666 GO:GO:0008203
GO:GO:0042304 GO:GO:0032868 GO:GO:0045541 GO:GO:0045716
GO:GO:0032933 CTD:22937 eggNOG:NOG264568 HOGENOM:HOG000230538
HOVERGEN:HBG019538 InterPro:IPR026964 PANTHER:PTHR22844:SF6
EMBL:D83782 EMBL:AK027402 EMBL:BC020987 EMBL:AK075528
IPI:IPI00006280 IPI:IPI00290700 IPI:IPI00290701 IPI:IPI00396357
RefSeq:NP_036367.2 UniGene:Hs.531789 ProteinModelPortal:Q12770
SMR:Q12770 IntAct:Q12770 STRING:Q12770 PhosphoSite:Q12770
DMDM:116242783 PaxDb:Q12770 PRIDE:Q12770 Ensembl:ENST00000265565
Ensembl:ENST00000545718 GeneID:22937 KEGG:hsa:22937 UCSC:uc003crg.2
UCSC:uc003crh.1 GeneCards:GC03M047430 H-InvDB:HIX0031165
HGNC:HGNC:30634 HPA:HPA004713 MIM:601510 neXtProt:NX_Q12770
PharmGKB:PA162402461 InParanoid:Q12770 OMA:CLPPAKP
OrthoDB:EOG42Z4PB ChiTaRS:SCAP GenomeRNAi:22937 NextBio:43683
ArrayExpress:Q12770 Bgee:Q12770 CleanEx:HS_SCAP
Genevestigator:Q12770 GermOnline:ENSG00000114650 Uniprot:Q12770
Length = 1279
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 51/227 (22%), Positives = 95/227 (41%)
Query: 109 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 167
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGVAELIPLVTTYIILFAYIYFSTR 304
Query: 168 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 227
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 228 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCL 419
Query: 288 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVD---CIPCLK 327
Q+ F ++ D R E +KR+ C+P K
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACLPSAK 466
>UNIPROTKB|F1NK67 [details] [associations]
symbol:SCAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0032868 "response
to insulin stimulus" evidence=IEA] [GO:0032933 "SREBP signaling
pathway" evidence=IEA] [GO:0042304 "regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0045540 "regulation of
cholesterol biosynthetic process" evidence=IEA] InterPro:IPR000731
PROSITE:PS50156 GO:GO:0016021 GO:GO:0005789 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540
GeneTree:ENSGT00390000000003 EMBL:AADN02000065 EMBL:AADN02000066
EMBL:AADN02000067 EMBL:AADN02000068 EMBL:AADN02000069
IPI:IPI00593979 Ensembl:ENSGALT00000039290 ArrayExpress:F1NK67
Uniprot:F1NK67
Length = 756
Score = 137 (53.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 52/247 (21%), Positives = 101/247 (40%)
Query: 105 WEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYIS 163
++ F+ + L + S N TL +S + K E A+ I +V +Y+++FAYI
Sbjct: 243 YDSRFLSSLRSRLKLLHPSPNCTLR--EDSIVHVHFKEEIGIAELIPLVTTYIILFAYIY 300
Query: 164 LTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLA 223
+ + S + + G+ TL E+ P+LV+
Sbjct: 301 FSTRKIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVV 355
Query: 224 VGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACR 283
+ ++N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA +
Sbjct: 356 IDLENVLVLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATELGIILIGYFTLVPAIQ 415
Query: 284 VFSMXXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCLKLSSSYADSDKGI 339
F + Q+ F ++ D R E +KR+ CL + + S +
Sbjct: 416 EFCLFAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPAEACLPPAKPASRSQRY- 474
Query: 340 GQRKPGL 346
+R+P +
Sbjct: 475 -ERQPAV 480
>UNIPROTKB|K7EIH7 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR003392
Pfam:PF02460 HGNC:HGNC:7897 EMBL:AC026634 EMBL:AC010853
Ensembl:ENST00000590723 Uniprot:K7EIH7
Length = 59
Score = 111 (44.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 18/32 (56%), Positives = 28/32 (87%)
Query: 737 VFSGITLTKLVGVIVLCFSRTEVFVVYYFQMY 768
VFSGITLTK G++VL F+++++F ++YF+MY
Sbjct: 1 VFSGITLTKFGGIVVLAFAKSQIFQIFYFRMY 32
>UNIPROTKB|F1PI33 [details] [associations]
symbol:SCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000731 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156
PROSITE:PS50294 SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR026964 PANTHER:PTHR22844:SF6
GeneTree:ENSGT00390000000003 EMBL:AAEX03012239 EMBL:AAEX03012240
Ensembl:ENSCAFT00000020960 Uniprot:F1PI33
Length = 1278
Score = 139 (54.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 109 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 167
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 168 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 227
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 228 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCL 419
Query: 288 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 326
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPSEACL 462
>UNIPROTKB|F8W921 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AC099778 InterPro:IPR026964
PANTHER:PTHR22844:SF6 HGNC:HGNC:30634 ChiTaRS:SCAP IPI:IPI01015900
ProteinModelPortal:F8W921 SMR:F8W921 Ensembl:ENST00000441517
UCSC:uc011baz.1 ArrayExpress:F8W921 Bgee:F8W921 Uniprot:F8W921
Length = 1023
Score = 137 (53.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 49/213 (23%), Positives = 89/213 (41%)
Query: 123 SKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLGDTPHLSSFYIXXXX 181
S N +L +ES + K E A+ I +V +Y+++FAYI + + S +
Sbjct: 6 SPNCSLR--AESLVHVHFKEEIGVAELIPLVTTYIILFAYIYFSTRKIDMVKSKW----- 58
Query: 182 XXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQL 241
+ G+ TL E+ P+LV+ +G++N+ +L +V +
Sbjct: 59 GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPV 118
Query: 242 ELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQI 301
+L ++ RI+ L SI +E+ +G F +PA + F + Q+
Sbjct: 119 DLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQM 178
Query: 302 TAFVALIVFDFLRAE----DKRVD---CIPCLK 327
F ++ D R E +KR+ C+P K
Sbjct: 179 LFFTTVLSIDIRRMELADLNKRLPPEACLPSAK 211
>RGD|1309378 [details] [associations]
symbol:Scap "SREBF chaperone" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0001666 "response to
hypoxia" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA;ISO] [GO:0007568 "aging" evidence=IEP]
[GO:0008203 "cholesterol metabolic process" evidence=IEA;ISO]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019217
"regulation of fatty acid metabolic process" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0032868
"response to insulin stimulus" evidence=IEA;ISO] [GO:0032933 "SREBP
signaling pathway" evidence=IEA;ISO] [GO:0042304 "regulation of
fatty acid biosynthetic process" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0045540 "regulation
of cholesterol biosynthetic process" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR000731 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156
PROSITE:PS50294 SMART:SM00320 RGD:1309378 GO:GO:0043231
GO:GO:0016021 GO:GO:0043234 GO:GO:0012507 GO:GO:0000139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0007568 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540 CTD:22937
eggNOG:NOG264568 HOGENOM:HOG000230538 HOVERGEN:HBG019538
InterPro:IPR026964 PANTHER:PTHR22844:SF6 OMA:CLPPAKP
OrthoDB:EOG42Z4PB GeneTree:ENSGT00390000000003 EMBL:BC131852
IPI:IPI00373570 RefSeq:NP_001094436.1 UniGene:Rn.99548
ProteinModelPortal:A2RRU4 STRING:A2RRU4 PRIDE:A2RRU4
Ensembl:ENSRNOT00000028295 GeneID:301024 KEGG:rno:301024
InParanoid:A2RRU4 NextBio:647952 Genevestigator:A2RRU4
Uniprot:A2RRU4
Length = 1276
Score = 138 (53.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 50/227 (22%), Positives = 95/227 (41%)
Query: 109 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 167
F+ + L+ + S N +L +E+ + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLSSLRARLMLLHPSPNCSLR--AENLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 168 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 227
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 228 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNVATELGIILIGYFTLVPAIQEFCL 419
Query: 288 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRV---DCIPCLK 327
Q+ F ++ D R E +KR+ C+P K
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPESCLPSAK 466
>UNIPROTKB|P97260 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:10029 "Cricetulus griseus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IDA] [GO:0032933 "SREBP signaling pathway" evidence=ISS]
[GO:0035105 "sterol regulatory element binding protein import into
nucleus" evidence=IMP] [GO:0072600 "establishment of protein
localization to Golgi" evidence=IMP] [GO:0090110 "cargo loading
into COPII-coated vesicle" evidence=IDA] [GO:0030127 "COPII vesicle
coat" evidence=IDA] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 GO:GO:0005783
GO:GO:0016021 GO:GO:0012507 GO:GO:0000139 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0008203 GO:GO:0072600
GO:GO:0090110 Reactome:REACT_147840 Reactome:REACT_147768
GO:GO:0035105 Reactome:REACT_147890 Reactome:REACT_147893 CTD:22937
HOVERGEN:HBG019538 InterPro:IPR026964 PANTHER:PTHR22844:SF6
EMBL:U67060 EMBL:AF541996 PIR:T18526 RefSeq:NP_001230965.1
ProteinModelPortal:P97260 TCDB:2.A.6.6.4 GeneID:100689048
Uniprot:P97260
Length = 1276
Score = 137 (53.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 50/227 (22%), Positives = 95/227 (41%)
Query: 109 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 167
F+ + L+ + S N +L +E+ + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLSSLRARLMLLHPSPNCSLR--AENLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 168 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 227
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 228 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNVATELGIILIGYFTLVPAIQEFCL 419
Query: 288 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRV---DCIPCLK 327
Q+ F ++ D R E +KR+ C+P K
Sbjct: 420 FAVVGLVSDFFLQMFFFTTVLSIDIRRMELADLNKRLPPESCLPSAK 466
>UNIPROTKB|Q5MNU5 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9823 "Sus scrofa" [GO:0012507
"ER to Golgi transport vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 GO:GO:0016021
GO:GO:0012507 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0008203
CTD:22937 eggNOG:NOG264568 HOVERGEN:HBG019538 InterPro:IPR026964
PANTHER:PTHR22844:SF6 OrthoDB:EOG42Z4PB EMBL:AY705447 EMBL:AY705448
EMBL:AY858690 EMBL:DQ076089 EMBL:DQ076090 EMBL:DQ076091
EMBL:DQ076092 EMBL:AY340938 RefSeq:NP_001185623.2 UniGene:Ssc.4111
UniGene:Ssc.96408 UniGene:Ssc.96851 ProteinModelPortal:Q5MNU5
STRING:Q5MNU5 GeneID:494015 KEGG:ssc:494015 Uniprot:Q5MNU5
Length = 1279
Score = 137 (53.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 109 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 167
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 168 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 227
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 228 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCL 419
Query: 288 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 326
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMPFFTTVLSIDIRRMELADLNKRLPPEACL 462
>UNIPROTKB|F1SNT3 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9823 "Sus scrofa" [GO:0045540
"regulation of cholesterol biosynthetic process" evidence=IEA]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0032933 "SREBP signaling pathway" evidence=IEA]
[GO:0032868 "response to insulin stimulus" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540
InterPro:IPR026964 PANTHER:PTHR22844:SF6 OMA:CLPPAKP
GeneTree:ENSGT00390000000003 EMBL:CU466436
Ensembl:ENSSSCT00000028855 ArrayExpress:F1SNT3 Uniprot:F1SNT3
Length = 1280
Score = 137 (53.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 109 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 167
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 168 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 227
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 228 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFTLVPAIQEFCL 419
Query: 288 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 326
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACL 462
>UNIPROTKB|A6QM06 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9913 "Bos taurus" [GO:0012507
"ER to Golgi transport vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 GO:GO:0016021
GO:GO:0012507 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0008203
EMBL:BC148152 IPI:IPI00867348 RefSeq:NP_001095359.1
UniGene:Bt.18085 ProteinModelPortal:A6QM06 STRING:A6QM06
PRIDE:A6QM06 GeneID:507878 KEGG:bta:507878 CTD:22937
eggNOG:NOG264568 HOGENOM:HOG000230538 HOVERGEN:HBG019538
NextBio:20868256 InterPro:IPR026964 PANTHER:PTHR22844:SF6
Uniprot:A6QM06
Length = 1278
Score = 136 (52.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 109 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 167
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 168 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 227
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 228 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIVLIGYFTLVPAIQEFCL 419
Query: 288 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 326
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACL 462
>UNIPROTKB|F1MQ33 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9913 "Bos taurus" [GO:0045540
"regulation of cholesterol biosynthetic process" evidence=IEA]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0032933 "SREBP signaling pathway" evidence=IEA]
[GO:0032868 "response to insulin stimulus" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540
IPI:IPI00867348 UniGene:Bt.18085 InterPro:IPR026964
PANTHER:PTHR22844:SF6 OMA:CLPPAKP GeneTree:ENSGT00390000000003
EMBL:DAAA02054449 Ensembl:ENSBTAT00000020961 ArrayExpress:F1MQ33
Uniprot:F1MQ33
Length = 1278
Score = 136 (52.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 50/223 (22%), Positives = 93/223 (41%)
Query: 109 FVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRE-STADAITIVISYLVMFAYISLTLG 167
F+ + L+ + S N +L +ES + K E A+ I +V +Y+++FAYI +
Sbjct: 247 FLGSLRARLMLLHPSPNCSLR--AESLVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR 304
Query: 168 DTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTLIIMEVIPFLVLAVGVD 227
+ S + + G+ TL E+ P+LV+ +G++
Sbjct: 305 KIDMVKSKW-----GLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLE 359
Query: 228 NMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSM 287
N+ +L +V ++L ++ RI+ L SI +E+ +G F +PA + F +
Sbjct: 360 NVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIVLIGYFTLVPAIQEFCL 419
Query: 288 XXXXXXXXXXXXQITAFVALIVFDFLRAE----DKRVDCIPCL 326
Q+ F ++ D R E +KR+ CL
Sbjct: 420 FAVVGLVSDFFLQMLFFTTVLSIDIRRMELADLNKRLPPEACL 462
>UNIPROTKB|F1NHB4 [details] [associations]
symbol:DISP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021
GeneTree:ENSGT00530000063208 EMBL:AADN02040023 IPI:IPI00573456
Ensembl:ENSGALT00000007565 OMA:YDITIFA Uniprot:F1NHB4
Length = 870
Score = 126 (49.4 bits), Expect = 0.00039, P = 0.00039
Identities = 51/216 (23%), Positives = 98/216 (45%)
Query: 548 FLNALPSASCAKGGHGAYTNSVDLK--GYENGIVQASSFRT-YHTPLNRQIDYVNSMRAA 604
FL+ + +G GA T + L+ G N F+T YH N Y +
Sbjct: 610 FLHCIKMMLLEQGREGAETYDLGLRFDGEGNLAALVLQFQTVYHYSFN----YSKAKHFY 665
Query: 605 REFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRT-------ALINLAIAIGAVFVVCLIT 657
E + V++ +M+ P + +F L+++ ++ + ++I FVV L+T
Sbjct: 666 EEINLWVTE--EMKTAPVGLQNGWFTSKLELYNLQHSLSTETMVVMGLSIAISFVVLLLT 723
Query: 658 TCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSV 717
T + S + + V+ +G++ +L+ QLNAV + + AVG++V+F V+ ++ +
Sbjct: 724 TWNVLLSVFSVTAIAGTVLVTVGLLVLLEWQLNAVESLFISAAVGLSVDFTVNYCISYHL 783
Query: 718 SS-GDKNQRMKEALGTMGASVFSGITLTKLVGVIVL 752
D+ R+ +L M + + GVI+L
Sbjct: 784 CPHSDRLSRVAFSLKQMSCATAMAASALFSAGVIML 819
>UNIPROTKB|F1NH44 [details] [associations]
symbol:PTCHD2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004869
Pfam:PF02460 Pfam:PF03176 PROSITE:PS50156 GO:GO:0016021
GO:GO:0008158 GeneTree:ENSGT00530000063208 OMA:AFESTTY
EMBL:AADN02059151 IPI:IPI00579823 Ensembl:ENSGALT00000007427
ArrayExpress:F1NH44 Uniprot:F1NH44
Length = 1337
Score = 92 (37.4 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 30/154 (19%), Positives = 73/154 (47%)
Query: 616 QMEIFPYSVFYMYFEQYLDIWRTA---LINLAIAI-GAVF--VVCLITTCSFWSSAIILL 669
Q+++FP + Q + W+ +I + A+ G + V+C+ F + ++LL
Sbjct: 1095 QLQLFPEGSALRHGFQTCEHWKQIFMEIIGVQSALYGLILSLVICVAAVAVFTTHILLLL 1154
Query: 670 VLTMIVVDLMGVMAILKI----QLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQR 725
+ + ++ ++ ++ + ++ AV ++L + VG +V++CVH+ + ++ +N
Sbjct: 1155 PVLLSILGVVCLVVTIMYWSGWEMGAVEAISLSILVGSSVDYCVHLVEGYLLAG--ENLP 1212
Query: 726 MKEALGTMGASVFSGITLTKLVGVIVLCFSRTEV 759
+ A + I + VGV ++ + T V
Sbjct: 1213 LHHAEDPTACRQWRTIEAIRHVGVAIVSSAVTTV 1246
Score = 81 (33.6 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 21/83 (25%), Positives = 41/83 (49%)
Query: 206 GVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELP-LETRISNALVEVGPSITLAS 264
G++ I+ V F+++ +GVD++ + ++ RQ L L R+ + + G + S
Sbjct: 455 GIQYLGILNGVAAFVIVGIGVDDVFVFINTY-RQATHLKDLRLRMIHTIQTAGKATFFTS 513
Query: 265 LSEVLAFAVGSFIPMPACRVFSM 287
L+ A+A F +PA F +
Sbjct: 514 LTTAAAYAANIFSQIPAVHDFGL 536
Score = 51 (23.0 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 345 GLLARYMKEV--HATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYL 402
G L +++E+ H + S + ++ LF+ L SI +R+ P ++ D+ +
Sbjct: 650 GHLIAHLQELLEHWVLWSAVKSRWVIVGLFLLVLLLSIFFASRLRPASRAPVLFRPDTNI 709
Query: 403 Q 403
Q
Sbjct: 710 Q 710
>UNIPROTKB|G3N2V7 [details] [associations]
symbol:G3N2V7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
OMA:KMWAAAF EMBL:DAAA02043117 Ensembl:ENSBTAT00000064822
Uniprot:G3N2V7
Length = 478
Score = 121 (47.7 bits), Expect = 0.00060, P = 0.00060
Identities = 44/180 (24%), Positives = 84/180 (46%)
Query: 96 GNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIV--I 153
G E ++ AW F+ + L + K + + + S S+ +L+ E+T+ + + +
Sbjct: 310 GEENERIKAWMIHFL-MKVGSLEESLALKKIQVVYFS--SLSRQLEFEATSMTVVPLFHL 366
Query: 154 SYL--VMFAYISLTLGDTPHLSSFYIXXXXXXXXXXXXXXXXXXXXXXXFFSAIGVKSTL 211
+YL ++FA +S D + ++ +GV L
Sbjct: 367 AYLLIILFAIVSCYRCDCVQ-NKMWVAVFGVISTALAVVSGFGLMLY------VGVPFVL 419
Query: 212 IIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAF 271
I+ PFL+L VGVD+M I++ A+++ L + R+S+ +V SIT+ +++ VLAF
Sbjct: 420 IVANS-PFLILGVGVDDMFIMISALQKTSLTGSISKRMSDVYSKVAVSITVTTVTNVLAF 478
>UNIPROTKB|E1BD00 [details] [associations]
symbol:PTCHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004869
Pfam:PF02460 Pfam:PF03176 PROSITE:PS50156 GO:GO:0016021
GO:GO:0008158 GeneTree:ENSGT00530000063208 EMBL:DAAA02042965
IPI:IPI00702926 Ensembl:ENSBTAT00000046272 Uniprot:E1BD00
Length = 1364
Score = 86 (35.3 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 26/134 (19%), Positives = 66/134 (49%)
Query: 637 RTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKI----QLNAV 692
++AL LA+++ ++C+ F + ++LL + + ++ ++ ++ + ++ AV
Sbjct: 1153 QSALYGLALSL----LICVAAVAVFTTHVLLLLPVLLSILGIVCLVVTIMYWSGWEMGAV 1208
Query: 693 SVVNLVMAVGIAVEFCVHITHAFSVSS------------GDKNQRMKEALGTMGASVFSG 740
++L + VG +V++CVH+ + ++ + R EA+ +G ++ S
Sbjct: 1209 EAISLSILVGSSVDYCVHLVEGYLLAGENLPPHQAEDAHSQRQWRTLEAVRHVGVAIVSS 1268
Query: 741 ITLTKLVGVIVLCF 754
LT ++ + L F
Sbjct: 1269 -ALTTVIATVPLFF 1281
Score = 82 (33.9 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 206 GVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ-QLELPLETRISNALVEVGPSITLAS 264
G++ I+ V F+++ +GVD++ + ++ ++ LE P + R+ + + G + S
Sbjct: 483 GIQYLGILNGVAAFVIVGIGVDDVFVFINTYRQATHLEDP-QLRMIHTIQTAGKATFFTS 541
Query: 265 LSEVLAFAVGSFIPMPACRVFSM 287
L+ A+A F +PA F +
Sbjct: 542 LTTAAAYAANVFSQIPAVHDFGL 564
Score = 56 (24.8 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 340 GQRKPGLLARYMKEVHATILSLWG-VKI--AVISLFVAFTLASIALCTRIEPGLEQKIVL 396
G + L+A+ + +H +L W VK ++ LFV+ + S+ +R+ P ++
Sbjct: 675 GGSRGQLIAQLQELLHHWVL--WSAVKSRWVIVGLFVSILVLSLVFASRLRPASRAPLLF 732
Query: 397 PRDSYLQ 403
D+ +Q
Sbjct: 733 RPDTNIQ 739
>UNIPROTKB|G3N0I7 [details] [associations]
symbol:PTCHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004869
Pfam:PF02460 Pfam:PF03176 PROSITE:PS50156 GO:GO:0016021
GO:GO:0008158 GeneTree:ENSGT00530000063208 OMA:AFESTTY
EMBL:DAAA02042965 Ensembl:ENSBTAT00000062936 Uniprot:G3N0I7
Length = 1393
Score = 86 (35.3 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 26/134 (19%), Positives = 66/134 (49%)
Query: 637 RTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKI----QLNAV 692
++AL LA+++ ++C+ F + ++LL + + ++ ++ ++ + ++ AV
Sbjct: 1182 QSALYGLALSL----LICVAAVAVFTTHVLLLLPVLLSILGIVCLVVTIMYWSGWEMGAV 1237
Query: 693 SVVNLVMAVGIAVEFCVHITHAFSVSS------------GDKNQRMKEALGTMGASVFSG 740
++L + VG +V++CVH+ + ++ + R EA+ +G ++ S
Sbjct: 1238 EAISLSILVGSSVDYCVHLVEGYLLAGENLPPHQAEDAHSQRQWRTLEAVRHVGVAIVSS 1297
Query: 741 ITLTKLVGVIVLCF 754
LT ++ + L F
Sbjct: 1298 -ALTTVIATVPLFF 1310
Score = 82 (33.9 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 206 GVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ-QLELPLETRISNALVEVGPSITLAS 264
G++ I+ V F+++ +GVD++ + ++ ++ LE P + R+ + + G + S
Sbjct: 512 GIQYLGILNGVAAFVIVGIGVDDVFVFINTYRQATHLEDP-QLRMIHTIQTAGKATFFTS 570
Query: 265 LSEVLAFAVGSFIPMPACRVFSM 287
L+ A+A F +PA F +
Sbjct: 571 LTTAAAYAANVFSQIPAVHDFGL 593
Score = 56 (24.8 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 340 GQRKPGLLARYMKEVHATILSLWG-VKI--AVISLFVAFTLASIALCTRIEPGLEQKIVL 396
G + L+A+ + +H +L W VK ++ LFV+ + S+ +R+ P ++
Sbjct: 704 GGSRGQLIAQLQELLHHWVL--WSAVKSRWVIVGLFVSILVLSLVFASRLRPASRAPLLF 761
Query: 397 PRDSYLQ 403
D+ +Q
Sbjct: 762 RPDTNIQ 768
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.136 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 811 738 0.00088 121 3 11 22 0.47 33
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 119
No. of states in DFA: 628 (67 KB)
Total size of DFA: 372 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.33u 0.11s 59.44t Elapsed: 00:00:03
Total cpu time: 59.36u 0.12s 59.48t Elapsed: 00:00:03
Start: Tue May 21 19:50:39 2013 End: Tue May 21 19:50:42 2013
WARNINGS ISSUED: 1