Query 003552
Match_columns 811
No_of_seqs 366 out of 3448
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 01:36:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003552.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003552hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 3E-203 6E-208 1772.1 73.0 811 1-811 2-812 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 8E-196 2E-200 1709.7 75.0 783 24-806 1-784 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 2E-173 4E-178 1415.1 31.3 550 7-556 1-550 (550)
4 KOG0853 Glycosyltransferase [C 100.0 3.7E-61 8.1E-66 537.0 24.8 494 195-797 1-495 (495)
5 TIGR02468 sucrsPsyn_pln sucros 100.0 2.9E-58 6.2E-63 552.3 41.2 457 277-770 168-671 (1050)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 2.1E-51 4.6E-56 468.8 42.1 426 279-767 1-438 (439)
7 PLN02939 transferase, transfer 100.0 1.9E-45 4.2E-50 435.9 47.0 514 201-770 383-967 (977)
8 PRK00654 glgA glycogen synthas 100.0 1.8E-43 3.9E-48 406.6 37.0 426 279-769 1-462 (466)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 5.3E-43 1.1E-47 393.6 39.8 399 281-769 1-401 (405)
10 TIGR02095 glgA glycogen/starch 100.0 5.2E-42 1.1E-46 395.1 39.1 435 279-769 1-472 (473)
11 cd03800 GT1_Sucrose_synthase T 100.0 2.4E-41 5.2E-46 375.9 41.5 397 280-764 1-397 (398)
12 PRK10307 putative glycosyl tra 100.0 1.7E-40 3.8E-45 375.0 38.6 397 279-770 1-408 (412)
13 PLN02316 synthase/transferase 100.0 2.9E-40 6.3E-45 398.5 42.4 405 278-769 587-1033(1036)
14 PRK14098 glycogen synthase; Pr 100.0 1.8E-40 3.9E-45 383.1 36.6 438 276-769 4-485 (489)
15 cd03796 GT1_PIG-A_like This fa 100.0 3.1E-40 6.8E-45 371.7 36.9 366 280-770 1-368 (398)
16 cd03791 GT1_Glycogen_synthase_ 100.0 4.2E-40 9.1E-45 378.7 37.5 432 280-768 1-475 (476)
17 PRK14099 glycogen synthase; Pr 100.0 2.4E-39 5.3E-44 373.4 38.6 436 278-770 3-479 (485)
18 PRK15427 colanic acid biosynth 100.0 6.3E-39 1.4E-43 362.8 38.4 281 405-769 116-405 (406)
19 TIGR02149 glgA_Coryne glycogen 100.0 8.5E-39 1.9E-43 356.2 38.1 378 279-769 1-386 (388)
20 PLN02871 UDP-sulfoquinovose:DA 100.0 6.6E-39 1.4E-43 368.6 38.2 379 276-774 56-440 (465)
21 cd04962 GT1_like_5 This family 100.0 2.5E-38 5.5E-43 349.2 39.4 366 279-769 1-370 (371)
22 PRK15484 lipopolysaccharide 1, 100.0 1.4E-37 3.1E-42 348.7 38.1 375 277-770 1-378 (380)
23 cd03805 GT1_ALG2_like This fam 100.0 3.8E-37 8.3E-42 343.4 35.9 386 279-763 1-392 (392)
24 cd03818 GT1_ExpC_like This fam 100.0 1E-36 2.3E-41 342.7 38.9 366 318-764 15-395 (396)
25 TIGR03088 stp2 sugar transfera 100.0 1.2E-36 2.5E-41 338.3 37.9 365 280-769 3-372 (374)
26 cd05844 GT1_like_7 Glycosyltra 100.0 5.5E-37 1.2E-41 338.0 33.0 281 406-766 81-367 (367)
27 PRK15179 Vi polysaccharide bio 100.0 3.3E-36 7.1E-41 356.6 37.7 458 202-768 203-692 (694)
28 cd04955 GT1_like_6 This family 100.0 1.2E-35 2.6E-40 325.7 38.7 361 280-768 1-363 (363)
29 PRK15490 Vi polysaccharide bio 100.0 1.8E-36 4E-41 345.0 32.5 395 299-768 171-574 (578)
30 cd03792 GT1_Trehalose_phosphor 100.0 1.8E-35 3.9E-40 329.5 35.0 287 405-769 83-371 (372)
31 cd03821 GT1_Bme6_like This fam 100.0 6.7E-35 1.5E-39 316.2 37.5 372 280-764 1-374 (375)
32 KOG1111 N-acetylglucosaminyltr 100.0 2.6E-36 5.6E-41 319.0 25.1 363 279-768 1-365 (426)
33 cd03819 GT1_WavL_like This fam 100.0 2.5E-35 5.4E-40 322.6 33.1 347 300-759 8-355 (355)
34 cd03799 GT1_amsK_like This is 100.0 4.4E-34 9.5E-39 311.9 36.8 272 405-763 77-355 (355)
35 cd03794 GT1_wbuB_like This fam 100.0 7.2E-34 1.6E-38 309.1 37.4 387 280-764 1-394 (394)
36 cd03802 GT1_AviGT4_like This f 100.0 6.1E-34 1.3E-38 309.1 36.1 333 279-768 1-335 (335)
37 cd03801 GT1_YqgM_like This fam 100.0 1.4E-33 3.1E-38 302.7 38.6 373 280-767 1-373 (374)
38 cd03814 GT1_like_2 This family 100.0 9E-34 2E-38 308.2 37.0 363 280-768 1-364 (364)
39 cd03795 GT1_like_4 This family 100.0 9.8E-34 2.1E-38 309.4 36.4 354 280-760 1-357 (357)
40 cd03813 GT1_like_3 This family 100.0 8.3E-35 1.8E-39 335.6 28.6 293 405-768 171-475 (475)
41 cd03817 GT1_UGDG_like This fam 100.0 2.2E-33 4.7E-38 304.8 36.7 372 280-769 1-373 (374)
42 cd03807 GT1_WbnK_like This fam 100.0 1.1E-33 2.4E-38 305.5 34.2 363 280-768 1-365 (365)
43 cd03822 GT1_ecORF704_like This 100.0 4.4E-33 9.5E-38 303.5 38.5 358 280-768 1-366 (366)
44 cd04951 GT1_WbdM_like This fam 100.0 3.5E-33 7.5E-38 305.4 36.8 358 280-768 1-359 (360)
45 PRK09922 UDP-D-galactose:(gluc 100.0 5.8E-34 1.3E-38 316.4 30.2 348 279-769 1-355 (359)
46 PLN02846 digalactosyldiacylgly 100.0 3E-33 6.4E-38 317.3 36.3 372 277-770 3-392 (462)
47 cd03812 GT1_CapH_like This fam 100.0 1.3E-33 2.9E-38 309.3 32.1 346 280-751 1-347 (358)
48 cd03816 GT1_ALG1_like This fam 100.0 9E-33 2E-37 313.4 37.1 390 276-763 1-410 (415)
49 cd03825 GT1_wcfI_like This fam 100.0 3.7E-33 8.1E-38 305.7 32.8 343 279-769 1-364 (365)
50 cd03820 GT1_amsD_like This fam 100.0 2.4E-32 5.1E-37 292.6 35.3 345 280-764 1-347 (348)
51 PRK10125 putative glycosyl tra 100.0 7.4E-33 1.6E-37 313.1 32.5 278 405-769 92-404 (405)
52 cd03808 GT1_cap1E_like This fa 100.0 3.9E-32 8.4E-37 292.2 36.2 356 280-764 1-358 (359)
53 cd03809 GT1_mtfB_like This fam 100.0 8.5E-33 1.8E-37 301.2 31.1 364 280-764 1-364 (365)
54 cd03798 GT1_wlbH_like This fam 100.0 8.8E-32 1.9E-36 290.3 37.9 362 301-768 13-375 (377)
55 cd03823 GT1_ExpE7_like This fa 100.0 3.3E-32 7.1E-37 294.9 34.5 353 280-768 1-358 (359)
56 cd03806 GT1_ALG11_like This fa 100.0 5.7E-32 1.2E-36 307.3 35.8 368 301-761 13-418 (419)
57 PLN02949 transferase, transfer 100.0 1.2E-31 2.7E-36 307.1 37.2 394 273-769 28-456 (463)
58 cd03811 GT1_WabH_like This fam 100.0 1.2E-31 2.6E-36 287.2 34.0 351 280-755 1-352 (353)
59 TIGR03087 stp1 sugar transfera 100.0 2.9E-32 6.4E-37 306.8 28.8 285 405-768 102-395 (397)
60 TIGR02918 accessory Sec system 100.0 1.9E-31 4E-36 308.4 31.9 280 405-769 209-499 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 7.6E-31 1.6E-35 297.0 30.9 276 405-764 125-406 (407)
62 PLN02275 transferase, transfer 100.0 2.2E-29 4.9E-34 281.5 30.8 318 318-728 23-370 (371)
63 cd04949 GT1_gtfA_like This fam 100.0 3.7E-29 8E-34 277.7 30.2 273 406-763 98-372 (372)
64 COG0297 GlgA Glycogen synthase 100.0 6.2E-29 1.3E-33 282.5 31.9 437 279-770 1-478 (487)
65 cd03804 GT1_wbaZ_like This fam 100.0 1.9E-29 4.2E-34 278.0 25.1 264 405-763 81-350 (351)
66 PLN02501 digalactosyldiacylgly 100.0 5.9E-28 1.3E-32 277.8 35.5 275 405-769 432-709 (794)
67 PHA01630 putative group 1 glyc 100.0 9.3E-29 2E-33 272.4 26.1 258 413-770 52-331 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 4E-27 8.7E-32 268.8 30.8 333 405-769 146-586 (590)
69 PRK00726 murG undecaprenyldiph 99.9 1.3E-25 2.8E-30 249.0 31.9 343 279-768 2-356 (357)
70 cd03788 GT1_TPS Trehalose-6-Ph 99.9 9.9E-26 2.1E-30 259.0 25.8 312 407-765 131-457 (460)
71 PHA01633 putative glycosyl tra 99.9 8.3E-25 1.8E-29 239.9 28.1 244 429-765 69-335 (335)
72 cd03785 GT1_MurG MurG is an N- 99.9 4.9E-24 1.1E-28 234.7 30.7 322 301-760 9-348 (350)
73 TIGR01133 murG undecaprenyldip 99.9 5.6E-24 1.2E-28 234.1 29.9 315 318-761 19-346 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 6.9E-24 1.5E-28 242.8 30.2 320 395-766 116-453 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 6.1E-23 1.3E-27 233.4 29.7 284 407-768 124-418 (425)
76 PRK13609 diacylglycerol glucos 99.9 1.4E-22 3E-27 227.0 24.0 262 406-768 103-370 (380)
77 PLN03063 alpha,alpha-trehalose 99.9 4.2E-22 9.1E-27 241.3 28.5 323 395-769 136-477 (797)
78 PF00534 Glycos_transf_1: Glyc 99.9 2.9E-23 6.4E-28 205.6 15.2 160 569-749 12-172 (172)
79 cd04950 GT1_like_1 Glycosyltra 99.9 2.5E-20 5.5E-25 208.6 32.9 267 404-768 99-370 (373)
80 PRK14501 putative bifunctional 99.9 4.7E-21 1E-25 231.8 26.8 310 407-770 133-463 (726)
81 cd01635 Glycosyltransferase_GT 99.9 1.7E-20 3.8E-25 190.3 24.0 121 577-713 109-229 (229)
82 PLN02605 monogalactosyldiacylg 99.9 3E-20 6.5E-25 208.8 27.4 264 405-767 98-379 (382)
83 TIGR02094 more_P_ylases alpha- 99.9 1.1E-19 2.4E-24 213.2 29.0 350 393-767 148-598 (601)
84 COG0438 RfaG Glycosyltransfera 99.8 4.6E-19 1E-23 187.3 29.0 291 408-770 84-377 (381)
85 PRK13608 diacylglycerol glucos 99.8 7.4E-19 1.6E-23 198.3 25.8 262 406-768 103-370 (391)
86 TIGR02398 gluc_glyc_Psyn gluco 99.8 1.3E-17 2.8E-22 191.0 30.8 314 407-766 132-479 (487)
87 TIGR00236 wecB UDP-N-acetylglu 99.8 4.5E-18 9.8E-23 189.6 21.6 275 406-765 85-363 (365)
88 KOG1387 Glycosyltransferase [C 99.8 1E-16 2.2E-21 169.7 29.6 293 402-767 145-456 (465)
89 PRK09814 beta-1,6-galactofuran 99.8 4.4E-17 9.6E-22 179.9 25.5 244 407-761 63-323 (333)
90 PRK00025 lpxB lipid-A-disaccha 99.8 1.8E-16 3.9E-21 177.3 26.3 250 405-750 83-356 (380)
91 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 1.2E-16 2.5E-21 177.2 24.2 250 406-742 87-344 (363)
92 cd04299 GT1_Glycogen_Phosphory 99.7 3.8E-16 8.3E-21 186.7 29.5 341 402-766 243-686 (778)
93 PLN03064 alpha,alpha-trehalose 99.7 5.1E-16 1.1E-20 188.1 28.1 307 408-766 232-558 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 4.6E-15 1E-19 172.4 26.2 169 572-766 319-518 (519)
95 PF05693 Glycogen_syn: Glycoge 99.6 3.9E-14 8.4E-19 161.9 23.8 329 407-770 142-582 (633)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 6.1E-15 1.3E-19 140.2 9.3 130 572-729 2-133 (135)
97 TIGR00215 lpxB lipid-A-disacch 99.5 3.2E-12 6.9E-17 144.2 25.2 250 405-748 87-364 (385)
98 KOG2941 Beta-1,4-mannosyltrans 99.5 2.4E-11 5.3E-16 129.4 29.7 378 320-764 33-436 (444)
99 PF00982 Glyco_transf_20: Glyc 99.4 7.3E-11 1.6E-15 135.8 26.5 311 407-767 141-472 (474)
100 PF13524 Glyco_trans_1_2: Glyc 99.4 3.7E-12 7.9E-17 114.0 10.3 92 668-765 1-92 (92)
101 PRK10117 trehalose-6-phosphate 99.4 2.5E-10 5.3E-15 130.3 27.0 311 407-767 123-451 (474)
102 COG0380 OtsA Trehalose-6-phosp 99.2 1.8E-09 4E-14 122.8 26.6 325 395-766 136-476 (486)
103 PF13439 Glyco_transf_4: Glyco 99.2 3.6E-11 7.8E-16 117.7 11.2 167 299-534 9-177 (177)
104 PLN02205 alpha,alpha-trehalose 99.2 2.3E-09 5E-14 131.2 28.8 311 409-766 203-548 (854)
105 PRK12446 undecaprenyldiphospho 99.2 8.6E-09 1.9E-13 115.1 29.9 248 405-766 89-348 (352)
106 COG0707 MurG UDP-N-acetylgluco 99.2 2.1E-08 4.5E-13 111.8 32.6 240 405-750 89-339 (357)
107 PF13579 Glyco_trans_4_4: Glyc 99.2 3.4E-11 7.4E-16 115.8 8.1 160 302-527 1-160 (160)
108 TIGR02919 accessory Sec system 99.1 1.4E-08 2.9E-13 116.2 24.4 144 572-750 282-426 (438)
109 cd03784 GT1_Gtf_like This fami 99.1 3.3E-08 7.2E-13 111.6 25.6 151 570-763 238-398 (401)
110 PF09314 DUF1972: Domain of un 99.0 1.1E-08 2.4E-13 103.3 15.5 182 278-529 1-185 (185)
111 TIGR01426 MGT glycosyltransfer 98.9 1.3E-06 2.7E-11 98.8 30.1 111 639-766 273-389 (392)
112 PF08323 Glyco_transf_5: Starc 98.9 8.1E-09 1.7E-13 109.6 9.7 183 280-489 1-230 (245)
113 PF13528 Glyco_trans_1_3: Glyc 98.8 4.8E-07 1E-11 98.8 22.2 115 570-725 191-314 (318)
114 TIGR03492 conserved hypothetic 98.8 3E-06 6.6E-11 96.2 27.4 165 571-765 204-394 (396)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 1.3E-06 2.9E-11 98.0 23.6 266 406-766 92-364 (365)
116 COG1519 KdtA 3-deoxy-D-manno-o 98.7 1.1E-05 2.4E-10 89.9 29.3 157 572-753 231-404 (419)
117 PF13477 Glyco_trans_4_2: Glyc 98.6 1E-06 2.2E-11 84.2 13.8 123 318-482 15-139 (139)
118 TIGR00661 MJ1255 conserved hyp 98.5 9.5E-06 2.1E-10 89.4 21.4 69 640-718 228-302 (321)
119 PHA03392 egt ecdysteroid UDP-g 98.4 0.0002 4.4E-09 84.0 29.9 138 572-748 297-445 (507)
120 PF13844 Glyco_transf_41: Glyc 98.3 1.6E-05 3.5E-10 91.0 17.7 185 558-769 273-466 (468)
121 TIGR03590 PseG pseudaminic aci 98.3 7.3E-05 1.6E-09 81.0 21.8 97 572-697 171-268 (279)
122 PF02350 Epimerase_2: UDP-N-ac 98.2 7.9E-05 1.7E-09 83.2 19.4 270 407-766 67-344 (346)
123 PF04007 DUF354: Protein of un 98.1 0.0004 8.6E-09 77.1 23.0 275 318-727 18-306 (335)
124 KOG3742 Glycogen synthase [Car 98.1 2.4E-05 5.1E-10 86.5 11.8 99 665-764 500-607 (692)
125 COG1819 Glycosyl transferases, 98.0 0.00043 9.3E-09 79.0 21.1 159 569-767 235-399 (406)
126 PLN02448 UDP-glycosyltransfera 98.0 0.0048 1E-07 71.7 28.7 127 570-729 273-413 (459)
127 PF02684 LpxB: Lipid-A-disacch 97.9 0.0012 2.7E-08 74.2 22.2 199 405-695 80-285 (373)
128 COG3914 Spy Predicted O-linked 97.7 0.001 2.3E-08 76.5 16.6 180 562-768 422-612 (620)
129 PRK14986 glycogen phosphorylas 97.6 0.0011 2.4E-08 80.2 16.0 151 563-723 534-702 (815)
130 cd04300 GT1_Glycogen_Phosphory 97.6 0.0015 3.4E-08 79.0 16.4 151 563-723 521-689 (797)
131 COG4641 Uncharacterized protei 97.5 0.0054 1.2E-07 67.9 18.9 117 641-768 237-360 (373)
132 COG0763 LpxB Lipid A disacchar 97.5 0.0068 1.5E-07 67.5 19.1 200 405-696 83-290 (381)
133 COG0058 GlgP Glucan phosphoryl 97.3 0.0072 1.6E-07 72.6 18.2 144 563-715 478-630 (750)
134 PLN02554 UDP-glycosyltransfera 97.3 0.24 5.1E-06 58.1 29.4 79 641-729 342-438 (481)
135 PLN03007 UDP-glucosyltransfera 97.2 0.64 1.4E-05 54.5 32.8 78 640-729 344-438 (482)
136 COG0381 WecB UDP-N-acetylgluco 97.2 0.11 2.3E-06 58.3 24.6 278 405-770 90-371 (383)
137 PLN02173 UDP-glucosyl transfer 97.2 0.69 1.5E-05 53.7 32.7 80 640-729 316-406 (449)
138 PLN02863 UDP-glucoronosyl/UDP- 97.2 0.69 1.5E-05 54.1 32.3 118 641-771 343-473 (477)
139 TIGR02093 P_ylase glycogen/sta 97.2 0.0047 1E-07 74.7 14.1 152 562-723 517-686 (794)
140 PRK10017 colanic acid biosynth 97.1 0.22 4.8E-06 57.3 26.6 105 631-750 297-407 (426)
141 PRK14985 maltodextrin phosphor 97.1 0.004 8.6E-08 75.3 12.3 149 563-722 520-687 (798)
142 PRK01021 lpxB lipid-A-disaccha 97.0 0.066 1.4E-06 63.4 21.7 197 405-695 308-513 (608)
143 PLN02208 glycosyltransferase f 97.0 1.1 2.3E-05 52.1 32.7 93 642-748 312-415 (442)
144 PLN02210 UDP-glucosyl transfer 97.0 1.1 2.4E-05 52.2 32.6 153 571-754 269-440 (456)
145 PLN02562 UDP-glycosyltransfera 97.0 0.87 1.9E-05 52.9 30.2 138 571-741 273-419 (448)
146 PRK02797 4-alpha-L-fucosyltran 97.0 0.16 3.5E-06 55.3 22.1 170 571-769 144-316 (322)
147 PLN00414 glycosyltransferase f 96.9 1.3 2.8E-05 51.5 31.7 88 652-749 319-417 (446)
148 PLN02670 transferase, transfer 96.8 1.7 3.7E-05 50.8 32.9 112 643-768 341-464 (472)
149 PF12000 Glyco_trans_4_3: Gkyc 96.8 0.0095 2E-07 59.9 10.3 112 395-533 55-170 (171)
150 PF07429 Glyco_transf_56: 4-al 96.6 0.34 7.3E-06 53.6 21.8 129 571-713 183-313 (360)
151 PLN02410 UDP-glucoronosyl/UDP- 96.5 2.3 5E-05 49.5 29.0 79 641-729 324-408 (451)
152 KOG1050 Trehalose-6-phosphate 96.3 0.37 7.9E-06 58.8 21.8 293 393-730 127-439 (732)
153 PF00343 Phosphorylase: Carboh 96.3 0.1 2.2E-06 62.9 16.8 222 469-715 326-596 (713)
154 PF11440 AGT: DNA alpha-glucos 96.3 0.4 8.7E-06 51.3 19.1 138 576-728 187-350 (355)
155 COG4671 Predicted glycosyl tra 96.0 1.8 3.9E-05 48.1 22.6 134 569-729 217-363 (400)
156 PLN00164 glucosyltransferase; 95.9 5 0.00011 47.1 28.6 72 652-729 346-429 (480)
157 PRK14089 ipid-A-disaccharide s 95.8 0.16 3.4E-06 57.0 14.2 91 573-696 169-261 (347)
158 PF06258 Mito_fiss_Elm1: Mitoc 95.7 0.82 1.8E-05 50.5 19.3 109 570-699 145-259 (311)
159 PLN02555 limonoid glucosyltran 95.7 6 0.00013 46.4 31.4 80 640-729 336-427 (480)
160 COG1817 Uncharacterized protei 95.7 1.8 3.9E-05 47.3 20.9 111 583-729 199-312 (346)
161 PLN02152 indole-3-acetate beta 95.2 8.5 0.00018 44.9 29.9 140 571-729 261-415 (455)
162 PF08288 PIGA: PIGA (GPI ancho 95.0 0.092 2E-06 46.6 7.2 71 360-441 14-86 (90)
163 PF04101 Glyco_tran_28_C: Glyc 94.8 0.0013 2.8E-08 65.3 -5.6 91 641-746 55-155 (167)
164 COG3980 spsG Spore coat polysa 94.5 0.68 1.5E-05 49.8 13.4 140 571-747 158-305 (318)
165 COG3660 Predicted nucleoside-d 94.3 2.6 5.7E-05 45.0 16.9 113 569-700 159-276 (329)
166 PLN02992 coniferyl-alcohol glu 93.7 18 0.00039 42.5 31.3 78 642-729 339-425 (481)
167 PLN03015 UDP-glucosyl transfer 92.9 23 0.00051 41.5 30.7 72 652-729 342-424 (470)
168 PRK10916 ADP-heptose:LPS hepto 91.7 25 0.00055 39.1 22.8 100 572-695 181-286 (348)
169 PF04464 Glyphos_transf: CDP-G 91.3 1.2 2.7E-05 49.8 10.6 132 563-729 185-334 (369)
170 PF00201 UDPGT: UDP-glucoronos 90.7 0.61 1.3E-05 54.5 7.7 130 571-741 276-415 (500)
171 cd03789 GT1_LPS_heptosyltransf 89.9 2 4.4E-05 46.1 10.3 98 574-695 124-223 (279)
172 PLN03004 UDP-glycosyltransfera 89.8 4.9 0.00011 46.8 13.9 146 570-740 269-429 (451)
173 PF05159 Capsule_synth: Capsul 88.8 20 0.00043 38.4 17.0 104 569-696 114-225 (269)
174 PF01075 Glyco_transf_9: Glyco 85.3 4.6 9.9E-05 42.3 9.5 103 570-695 104-208 (247)
175 PF10933 DUF2827: Protein of u 84.8 22 0.00049 39.8 14.6 161 564-750 181-345 (364)
176 PLN02534 UDP-glycosyltransfera 84.7 92 0.002 36.8 32.3 77 641-729 344-442 (491)
177 COG1703 ArgK Putative periplas 84.5 9.5 0.00021 41.8 11.3 146 257-440 23-176 (323)
178 PRK10422 lipopolysaccharide co 84.1 7.1 0.00015 43.6 10.8 103 571-695 183-287 (352)
179 PF06925 MGDG_synth: Monogalac 82.4 1.7 3.6E-05 43.4 4.4 60 405-487 87-150 (169)
180 PLN02167 UDP-glycosyltransfera 82.2 23 0.00051 41.5 14.5 79 641-729 340-432 (475)
181 PLN02764 glycosyltransferase f 81.9 50 0.0011 38.6 16.8 72 652-729 324-405 (453)
182 PF12038 DUF3524: Domain of un 81.4 4.6 0.0001 40.4 6.9 111 405-528 57-168 (168)
183 COG2327 WcaK Polysaccharide py 80.1 1.2E+02 0.0025 34.8 28.0 101 628-741 253-357 (385)
184 TIGR02195 heptsyl_trn_II lipop 79.7 12 0.00026 41.3 10.4 99 572-695 175-276 (334)
185 PF10087 DUF2325: Uncharacteri 78.5 7.1 0.00015 35.3 6.8 84 606-704 2-90 (97)
186 PF01975 SurE: Survival protei 77.7 18 0.00038 37.4 10.2 39 279-343 1-39 (196)
187 TIGR03609 S_layer_CsaB polysac 77.7 1.1E+02 0.0024 33.1 17.2 86 587-695 190-275 (298)
188 TIGR02201 heptsyl_trn_III lipo 76.2 17 0.00037 40.3 10.4 102 572-695 182-285 (344)
189 TIGR02193 heptsyl_trn_I lipopo 76.1 19 0.00041 39.4 10.7 99 571-695 179-279 (319)
190 KOG4626 O-linked N-acetylgluco 75.9 31 0.00067 41.2 12.3 194 562-783 751-952 (966)
191 COG0859 RfaF ADP-heptose:LPS h 73.8 20 0.00043 39.9 10.2 99 571-695 175-276 (334)
192 PF11997 DUF3492: Domain of un 73.3 7.5 0.00016 42.1 6.4 79 406-484 171-255 (268)
193 PLN02207 UDP-glycosyltransfera 72.9 1.1E+02 0.0024 36.0 16.2 133 571-729 275-424 (468)
194 KOG0853 Glycosyltransferase [C 72.5 11 0.00025 44.0 7.9 100 470-603 205-304 (495)
195 PF03401 TctC: Tripartite tric 72.5 35 0.00075 37.0 11.3 152 572-748 78-245 (274)
196 PF08660 Alg14: Oligosaccharid 71.2 17 0.00037 36.6 8.0 64 405-487 90-159 (170)
197 KOG1192 UDP-glucuronosyl and U 70.3 1E+02 0.0022 35.7 15.5 140 572-744 278-431 (496)
198 PRK05562 precorrin-2 dehydroge 70.1 1.1E+02 0.0025 32.2 14.1 126 603-753 48-180 (223)
199 PRK10964 ADP-heptose:LPS hepto 69.3 33 0.00071 37.7 10.5 97 573-695 180-278 (322)
200 PF03016 Exostosin: Exostosin 68.6 11 0.00025 40.5 6.6 69 655-724 227-298 (302)
201 PRK02122 glucosamine-6-phospha 66.6 18 0.00038 44.2 8.2 43 275-340 366-408 (652)
202 PRK13932 stationary phase surv 64.0 1.1E+02 0.0024 33.0 12.7 39 276-341 3-41 (257)
203 PF05686 Glyco_transf_90: Glyc 62.5 28 0.0006 39.9 8.4 81 686-770 234-318 (395)
204 PF03033 Glyco_transf_28: Glyc 60.8 6.1 0.00013 37.3 2.4 28 301-340 8-35 (139)
205 TIGR00087 surE 5'/3'-nucleotid 58.0 1.6E+02 0.0034 31.6 12.6 35 405-439 84-129 (244)
206 smart00672 CAP10 Putative lipo 57.0 49 0.0011 35.6 8.7 47 720-770 203-249 (256)
207 KOG1021 Acetylglucosaminyltran 53.4 87 0.0019 36.7 10.7 96 657-758 336-434 (464)
208 TIGR00715 precor6x_red precorr 53.1 40 0.00087 36.3 7.2 34 666-699 198-233 (256)
209 PRK04020 rps2P 30S ribosomal p 52.8 61 0.0013 33.7 8.2 113 582-717 47-161 (204)
210 PF04413 Glycos_transf_N: 3-De 52.0 58 0.0013 33.2 7.9 68 407-487 95-162 (186)
211 COG1618 Predicted nucleotide k 51.7 2E+02 0.0044 29.1 11.1 44 274-341 1-44 (179)
212 KOG0780 Signal recognition par 51.6 3.6E+02 0.0078 31.0 14.2 199 575-795 157-381 (483)
213 COG1647 Esterase/lipase [Gener 50.0 59 0.0013 34.4 7.4 43 394-438 73-115 (243)
214 TIGR01470 cysG_Nterm siroheme 47.8 3.4E+02 0.0073 28.1 14.6 136 592-754 23-166 (205)
215 PF15024 Glyco_transf_18: Glyc 47.6 1.7E+02 0.0038 34.9 11.7 158 570-772 275-458 (559)
216 COG2910 Putative NADH-flavin r 47.1 20 0.00043 36.8 3.4 33 279-340 1-33 (211)
217 PF05728 UPF0227: Uncharacteri 46.8 1.5E+02 0.0031 30.4 9.8 30 410-440 62-91 (187)
218 COG4088 Predicted nucleotide k 46.7 84 0.0018 33.0 7.9 49 388-438 56-108 (261)
219 PF04230 PS_pyruv_trans: Polys 46.3 3.4E+02 0.0074 27.7 16.0 95 584-696 189-283 (286)
220 PRK13933 stationary phase surv 45.1 3.5E+02 0.0076 29.1 12.8 34 405-438 85-129 (253)
221 TIGR01012 Sa_S2_E_A ribosomal 42.6 73 0.0016 33.0 6.8 112 582-717 41-155 (196)
222 PRK13935 stationary phase surv 42.0 3.9E+02 0.0085 28.8 12.5 34 405-438 84-128 (253)
223 PF10649 DUF2478: Protein of u 41.2 3.8E+02 0.0082 26.9 11.4 108 318-439 18-132 (159)
224 PF00731 AIRC: AIR carboxylase 40.9 3.7E+02 0.0081 26.6 13.6 129 606-749 4-146 (150)
225 PRK00676 hemA glutamyl-tRNA re 39.1 6.1E+02 0.013 28.6 14.4 125 602-750 173-305 (338)
226 PF09752 DUF2048: Uncharacteri 37.2 1.9E+02 0.0041 32.7 9.5 42 396-439 165-206 (348)
227 COG0496 SurE Predicted acid ph 34.9 2E+02 0.0044 31.0 8.9 35 406-440 82-127 (252)
228 PRK10840 transcriptional regul 34.8 4.9E+02 0.011 26.2 12.2 109 604-729 4-124 (216)
229 PRK13934 stationary phase surv 34.6 4.5E+02 0.0098 28.6 11.6 34 405-438 82-127 (266)
230 PTZ00254 40S ribosomal protein 33.7 1.1E+02 0.0023 32.9 6.6 113 582-717 50-165 (249)
231 PF13407 Peripla_BP_4: Peripla 33.0 3.2E+02 0.0069 28.1 10.3 77 622-698 12-89 (257)
232 COG2236 Predicted phosphoribos 32.4 94 0.002 32.0 5.8 47 386-433 9-55 (192)
233 PLN00016 RNA-binding protein; 31.3 49 0.0011 37.3 3.9 37 276-341 50-90 (378)
234 PRK06988 putative formyltransf 30.0 2.3E+02 0.005 31.3 8.8 14 318-331 16-29 (312)
235 COG1519 KdtA 3-deoxy-D-manno-o 30.0 3.7E+02 0.008 31.1 10.4 104 571-696 49-153 (419)
236 PRK04531 acetylglutamate kinas 29.5 1.5E+02 0.0033 34.1 7.4 57 570-643 35-92 (398)
237 PRK03359 putative electron tra 29.2 1.8E+02 0.0039 31.4 7.5 34 407-440 112-149 (256)
238 TIGR02990 ectoine_eutA ectoine 29.0 4.9E+02 0.011 27.7 10.8 34 405-438 179-214 (239)
239 TIGR00732 dprA DNA protecting 28.8 4.2E+02 0.0091 27.8 10.1 124 584-722 82-217 (220)
240 PRK08057 cobalt-precorrin-6x r 28.5 2.3E+02 0.005 30.4 8.2 33 406-438 64-100 (248)
241 PF10649 DUF2478: Protein of u 27.8 1.1E+02 0.0024 30.6 5.2 40 657-696 85-130 (159)
242 PF08672 APC2: Anaphase promot 27.6 25 0.00054 29.2 0.5 36 5-40 13-51 (60)
243 cd01020 TroA_b Metal binding p 26.7 2.9E+02 0.0062 29.6 8.7 128 659-797 47-175 (264)
244 PRK12342 hypothetical protein; 26.5 1.8E+02 0.0039 31.4 6.9 34 407-440 109-146 (254)
245 TIGR01568 A_thal_3678 uncharac 25.9 1.1E+02 0.0023 26.1 4.0 50 222-272 7-58 (66)
246 COG4195 Phage-related replicat 25.9 79 0.0017 32.3 3.8 61 245-322 7-67 (208)
247 COG0569 TrkA K+ transport syst 25.8 2E+02 0.0044 30.1 7.2 30 406-435 65-97 (225)
248 PF04392 ABC_sub_bind: ABC tra 25.1 4.2E+02 0.0091 28.6 9.8 85 624-715 146-234 (294)
249 PRK09213 pur operon repressor; 25.0 6E+02 0.013 27.7 10.6 33 406-438 129-161 (271)
250 PLN02764 glycosyltransferase f 25.0 6.1E+02 0.013 29.7 11.4 25 407-434 108-132 (453)
251 PLN02657 3,8-divinyl protochlo 24.2 75 0.0016 36.2 3.8 52 261-341 43-94 (390)
252 PRK10360 DNA-binding transcrip 24.0 6.6E+02 0.014 24.3 10.9 74 656-729 37-116 (196)
253 COG1618 Predicted nucleotide k 23.7 1.5E+02 0.0033 30.0 5.2 72 656-729 92-175 (179)
254 PF04844 Ovate: Transcriptiona 23.6 1.2E+02 0.0025 25.4 3.7 48 223-272 2-51 (59)
255 COG3181 Uncharacterized protei 23.4 1.1E+03 0.023 26.5 13.3 150 573-747 123-287 (319)
256 PRK13478 phosphonoacetaldehyde 23.1 8.4E+02 0.018 25.8 11.5 98 583-700 102-207 (267)
257 PF03308 ArgK: ArgK protein; 22.5 3.7E+02 0.008 29.2 8.2 108 303-438 41-152 (266)
258 TIGR03642 cas_csx13 CRISPR-ass 22.4 2.9E+02 0.0062 26.5 6.7 40 390-430 71-116 (124)
259 PRK13288 pyrophosphatase PpaX; 22.0 7.6E+02 0.016 24.9 10.5 120 583-725 83-210 (214)
260 cd03146 GAT1_Peptidase_E Type 21.3 8.3E+02 0.018 25.2 10.6 109 575-699 3-124 (212)
261 CHL00194 ycf39 Ycf39; Provisio 21.3 85 0.0018 34.3 3.4 33 279-340 1-33 (317)
262 PRK13940 glutamyl-tRNA reducta 21.2 1.3E+03 0.028 26.6 16.1 67 654-725 232-300 (414)
263 PF04844 Ovate: Transcriptiona 21.1 1.3E+02 0.0028 25.0 3.5 45 10-55 10-54 (59)
264 COG0052 RpsB Ribosomal protein 21.1 1.1E+03 0.023 25.6 12.5 169 549-748 5-222 (252)
265 COG3171 Uncharacterized protei 20.6 82 0.0018 29.5 2.5 32 232-263 25-60 (119)
266 PRK15408 autoinducer 2-binding 20.3 8.9E+02 0.019 26.8 11.3 76 622-699 37-115 (336)
267 PF06258 Mito_fiss_Elm1: Mitoc 20.3 1.2E+03 0.026 25.8 13.1 147 570-729 111-268 (311)
268 PLN03004 UDP-glycosyltransfera 20.2 7.8E+02 0.017 28.8 11.1 25 408-434 113-137 (451)
269 CHL00200 trpA tryptophan synth 20.1 1.1E+03 0.024 25.4 13.6 122 571-714 91-231 (263)
270 PRK11519 tyrosine kinase; Prov 20.1 1.2E+03 0.025 29.1 13.2 43 397-439 625-669 (719)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=3e-203 Score=1772.09 Aligned_cols=811 Identities=82% Similarity=1.306 Sum_probs=788.2
Q ss_pred CCCCCCCCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceee
Q 003552 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAI 80 (811)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 80 (811)
|++++|+|++||+|+++++|++|||+|++||+||+++||++||+|||+++|+++++++.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 56689999999999999999999999999999999999999999999999999987777788899999999999999999
Q ss_pred ecCCeEEEEEcCCCceEEEEEEecCcceeeecChHHHhhhhhhhcccccCCCceeeeeccccccCCCCCCCCCCCCchhh
Q 003552 81 VLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQ 160 (811)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (811)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+|+||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhhhhhccccCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhccCcc
Q 003552 161 FLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240 (811)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 240 (811)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHhhcCCCcchHHHHhcCCCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHH
Q 003552 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 320 (811)
Q Consensus 241 gwg~~~~r~~~~~~~~~~~~~~p~~~~le~f~~~~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~ 320 (811)
||||||+||+|||++|+|+|++|||++||+||+||||+|||++||+||+|+|.+++|+||||||++||+|||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHH
Q 003552 321 LRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEI 400 (811)
Q Consensus 321 ~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i 400 (811)
++|+++||+|+|+|+|+||.+++..+++|+++.|.+.++++++|+|+||++.++++++|++|+++|||++.|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEe
Q 003552 401 TAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (811)
Q Consensus 401 ~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (811)
.+..+++|||||+|||+++++|.++++++|||+|+|+|++++.|+..++.+|+..+..|++++|+++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 77767899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccc
Q 003552 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (811)
Q Consensus 481 ~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (811)
+|.+++++++++++||+||.+|+||++|++++|++++++|++|||||+|...|+|+....++.+.+++.|++++|++.+.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred ccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003552 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (811)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (811)
++++|.+.++++++|+++||+++.||++.|++|++++.+.+++++|+|||++.++..+.+.++.+++++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 99999887888999999999999999999999999998877899999999986556667788888889999999999999
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHH
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~ 720 (811)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++|||+||+|||||+.||+.|+|.+|.+|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999999778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhhHHHHHHHhhHHHHHHhhcccccc
Q 003552 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLV 800 (811)
Q Consensus 721 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~~f~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 800 (811)
+|++|.+++++|+.||+.|++|+++|++++.++|||+.++++++++..+||||++++|++|+|++|||||||+||||+||
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 801 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELA 801 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHh
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccCCC
Q 003552 801 KSVPLASENQH 811 (811)
Q Consensus 801 ~~~~~~~~~~~ 811 (811)
++||+++|+++
T Consensus 802 ~~~~~~~~~~~ 812 (815)
T PLN00142 802 KTVPLAVDDPQ 812 (815)
T ss_pred hcCCcccccCC
Confidence 99999999764
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=8.4e-196 Score=1709.66 Aligned_cols=783 Identities=75% Similarity=1.231 Sum_probs=761.2
Q ss_pred HHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeEEEEEcCCCceEEEEEEe
Q 003552 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVN 103 (811)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (811)
|++|++||+||+++||++||+|||+++|+++|.++.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 68999999999999999999999999999999776667889999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHhhhhhhhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhhhccccCCCCCchhHHHH
Q 003552 104 VYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDF 183 (811)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (811)
++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhccCccCCCCcHHHHHHHHHHHHHhhcCC
Q 003552 184 LRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAP 263 (811)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~r~~~~~~~~~~~~~~p 263 (811)
||.|+|+|++|||||||+|+.+||++|++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHhcCCCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCC
Q 003552 264 DPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 343 (811)
Q Consensus 264 ~~~~le~f~~~~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~ 343 (811)
||++||+||+||||+|||+|||+||+|+|.+++|.||||||++||++||||||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccceeeecCccCeEEEEecCccccc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003552 344 AKGTTCNQRLERVSGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (811)
Q Consensus 344 ~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~-~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva 422 (811)
+.+++|+++.+.+.++++++|+|+|+++..+ ++++|++|+++|||++.|+.++.+.+.+..+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 9899999999999999999999999999877 789999999999999999999999998777789999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccc
Q 003552 423 SLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502 (811)
Q Consensus 423 ~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~ 502 (811)
.++++++|||+|+|+|++++.|+..++.+|...+.+|+++++++++.++|+.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccC
Q 003552 503 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 582 (811)
Q Consensus 503 ~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~ 582 (811)
|||++|++++|++++++|++|||||+|.+.|+|++...++...+++.++++||++++.++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888999999999999999999998889999999999999
Q ss_pred ccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHH
Q 003552 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (811)
Q Consensus 583 ~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~i 662 (811)
+.||++.|++|++++++++++++|+|||++.++.++.|.++.+++++++++++++++.++|+|+|++.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999877778899999999987778889999999999999999999999999999877677888999999
Q ss_pred HccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHH
Q 003552 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (811)
Q Consensus 663 a~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~m 742 (811)
++++|+||+||++|+||++++|||+||+|||||+.||+.|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhhHHHHHHHhhHHHHHHhhcccccccccccC
Q 003552 743 SDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLA 806 (811)
Q Consensus 743 s~~a~~~v~e~yswe~~a~~ll~Ly~~~~f~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 806 (811)
+++|++++.++|||+.++++++++..+||||++++|++|+|++|||||||+|||||||++||++
T Consensus 721 s~~a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=1.6e-173 Score=1415.15 Aligned_cols=550 Identities=76% Similarity=1.203 Sum_probs=475.7
Q ss_pred CCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeE
Q 003552 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFV 86 (811)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 86 (811)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++|+++.++.++.+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 79999999999999999999999999999999999999999999999998777778888999999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecChHHHhhhhhhhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhh
Q 003552 87 AIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHL 166 (811)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (811)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred hccccCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhccCccCCCCcH
Q 003552 167 SSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA 246 (811)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~ 246 (811)
|||||+|++++++||+|||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcchHHHHhcCCCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC
Q 003552 247 EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ 326 (811)
Q Consensus 247 ~r~~~~~~~~~~~~~~p~~~~le~f~~~~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~ 326 (811)
+||+|||++|+++|+||||++||+|++||||+++||++||||||+|++|||+||||||++||+|||||||++|..+++.+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCC
Q 003552 327 GLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQG 406 (811)
Q Consensus 327 GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~ 406 (811)
|.+|.|+|+|+||.+|++.|++|+++++++.+++|++|+|+||++.++++++|+|||++|||++.|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHH
Q 003552 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (811)
Q Consensus 407 ~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (811)
+||+||+||+++|++|+++++++|||+|+|+|+++++||+.++++|++++.+|||+|||+||.++|+.||+|||||+||+
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccC
Q 003552 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 556 (811)
Q Consensus 487 ~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~ 556 (811)
+|+++++|||+||.+||||+|||+++||++|+|||||||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 4
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=3.7e-61 Score=537.01 Aligned_cols=494 Identities=42% Similarity=0.632 Sum_probs=436.5
Q ss_pred ecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhccCccCCCCcHHHHHHHHHHHHHhhcCCCcchHHHHhcC
Q 003552 195 MLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR 274 (811)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~r~~~~~~~~~~~~~~p~~~~le~f~~~ 274 (811)
|+||++++...+|+.+.+|+..++.. .+||+..|.+.+++.++++|||.++.+|..++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999888
Q ss_pred CCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccee
Q 003552 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (811)
Q Consensus 275 ~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e 354 (811)
++. +||.|++||+++|+++++++||.+|..+..+.+.+++++|.+++...|...+ +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 455 8999999999999999999999999999999999999999999999998765 4556
Q ss_pred eecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003552 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (811)
Q Consensus 355 ~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v 434 (811)
...++.+++|+++|+. +..+|+ +.+||++..|+ .+...+.+.+++ ||++|.++++.+..+.+++++.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 6677788999999993 445677 78999999998 556677777777 999999999999999999999999999
Q ss_pred EEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccccccc-ceeeecc
Q 003552 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHG 513 (811)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~-ly~v~~G 513 (811)
++.|.++..++..++.+|+.+...|+++++|.++...++++| ++++++++++...+.++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999998 9999999
Q ss_pred CCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHH
Q 003552 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (811)
Q Consensus 514 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA 593 (811)
+++|.++++.++||.|.+.+.|.- +.+++.|. +
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~------~~~~~~i~-------------------~---------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAF------TLLHDSIP-------------------E---------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhH------HhhhcccC-------------------C----------------------
Confidence 999999999999999998887721 11111110 0
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecC
Q 003552 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (811)
Q Consensus 594 ~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS 673 (811)
...++.+++++|+. .++++++|+.++.++|+++++++++.++++|.-. ..+..+-|++++++..+|++|+
T Consensus 305 -----~~~~~~hl~~~g~~--G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR--GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCC--CccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCC
Confidence 11245677777732 1568899999999999999999999766655532 3344566999999888999999
Q ss_pred CCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 003552 674 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (811)
Q Consensus 674 ~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~ 753 (811)
. |.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.++ ...+.+++.+|..||++|.+|+++|+++|++.
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~-~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~ 451 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEA-VAELADALLKLRRDPELWARMGKNGLKRVKEM 451 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999 5452 22333444677799999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhhhHHhhHHHHHHHhhHHHHHHhhccc
Q 003552 754 YTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFR 797 (811)
Q Consensus 754 yswe~~a~~ll~Ly~~~~f~~~~~~~~~~~~~~y~~~~~~~~~~ 797 (811)
|||+.+.+++.++...|.+|+.++...+.+.+||++|||.|+||
T Consensus 452 fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 452 FSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred HhHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999986
No 5
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=2.9e-58 Score=552.28 Aligned_cols=457 Identities=25% Similarity=0.457 Sum_probs=355.7
Q ss_pred CcceEEEEccccccccccc-CC-CCCcccceeehHHHHHHHHHHHHHHHHHCC--CceeeceeEEeccCCCC-CCCcccc
Q 003552 277 MVFNVVILSPHGYFGQANV-LG-LPDTGGQVVYILDQVRALENEMLLRIKRQG--LDISPKILIVTRLIPDA-KGTTCNQ 351 (811)
Q Consensus 277 m~~rI~ivS~hg~~~~~~~-lG-~p~~GG~~vyvld~araLe~~L~~~L~~~G--heV~~~ilVvT~~~p~~-~~~~~~~ 351 (811)
+.|.|++||+||.|+.+++ +| .+|||||++||+ +|+++|++.| |+|+ |+||.+.+. .+.+|.+
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~ 235 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGE 235 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCC
Confidence 3589999999999998887 88 599999999999 6666678888 8999 999997643 3445666
Q ss_pred ceeee------------cCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHH-------c----CCCc
Q 003552 352 RLERV------------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-------L----QGFP 408 (811)
Q Consensus 352 ~~e~i------------~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~-------~----~~~P 408 (811)
..|.+ ...+|++|+|+|+++.. +++++..+|||+..|+..+...+.+. . ...|
T Consensus 236 p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~p 311 (1050)
T TIGR02468 236 PTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWP 311 (1050)
T ss_pred ccccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCC
Confidence 65433 34468999999999763 36788999999999999999887541 1 1249
Q ss_pred eEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCC----CChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHH
Q 003552 409 DFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP----DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (811)
Q Consensus 409 DlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~----~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (811)
||||+|||+++.++.++++.+++|+|+|.|++...++. .....+...+..|++..++.+|..++..||.|||+|.+
T Consensus 312 DvIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~q 391 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQ 391 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHH
Confidence 99999999999999999999999999999999877653 22334556677788899999999999999999999999
Q ss_pred HHhhccccccccccccccccccceee-----eccCC---CCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccC
Q 003552 485 EIAGTKNTVGQYESHTAFTLPGLYRV-----VHGID---VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 556 (811)
Q Consensus 485 ~~~~~k~~v~qy~s~~~~~lp~ly~v-----~~Gi~---~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~ 556 (811)
+++ +||..|..|. |.+|++ .+|+. .+.+|+.|||||+|.+.|.|......+... ..+.....
T Consensus 392 E~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~ 461 (1050)
T TIGR02468 392 EIE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAK 461 (1050)
T ss_pred HHH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---cccccccc
Confidence 987 3555555554 444443 34443 346799999999999999986432211000 00000000
Q ss_pred cccc-c-cccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCC--CeEEEEEeCcCCCCCCcchHHHHHHHHHHH
Q 003552 557 PEQN-D-EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHE 632 (811)
Q Consensus 557 ~~~~-~-~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~--~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~ 632 (811)
+... . .....+.++++|+|+++||+++.||++.|++|++.+.+..+ ++. +|+|++++ .+........+...+.+
T Consensus 462 ~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd-~d~l~~~~~~~l~~L~~ 539 (1050)
T TIGR02468 462 PDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDD-IDEMSSGSSSVLTSVLK 539 (1050)
T ss_pred ccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCch-hhhhhccchHHHHHHHH
Confidence 0000 0 00111226788999999999999999999999999975443 444 46677654 11111122345677899
Q ss_pred HHHHcCCCCcEEEeccccCcCChHHHHHHHHcc---ccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCc
Q 003552 633 LMKTYKLDGQFRWIAAQTNRARNGELYRYIADT---KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (811)
Q Consensus 633 li~~~~L~~~V~flG~~~~~v~~~el~~~ia~a---advfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~ 709 (811)
+++++++.++|.|+| .++..++..+|+.+ +|+||+||++|+||++++||||||+|||||+.||+.|+|.++.+
T Consensus 540 li~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~n 615 (1050)
T TIGR02468 540 LIDKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDN 615 (1050)
T ss_pred HHHHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCc
Confidence 999999999999999 66778888888752 27999999999999999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 710 G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
|++++|.|++++|++|.+++ +|++.|++|+++|++++ ++|||+.++++|++.+...
T Consensus 616 GlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 616 GLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred EEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 99999999999999996555 89999999999999998 5799999999999988755
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2.1e-51 Score=468.83 Aligned_cols=426 Identities=29% Similarity=0.546 Sum_probs=318.5
Q ss_pred ceEEEEcccccccccc-cCCC-CCcccceeehHHHHHHHHHHHHHHHHHCCC--ceeeceeEEeccCCCCC-CCccccce
Q 003552 279 FNVVILSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKRQGL--DISPKILIVTRLIPDAK-GTTCNQRL 353 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~-~lG~-p~~GG~~vyvld~araLe~~L~~~L~~~Gh--eV~~~ilVvT~~~p~~~-~~~~~~~~ 353 (811)
+||+++|+||+|+|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+.+++.. ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999998 6775 99999999999 77778899997 999 9998765431 12333233
Q ss_pred eeecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003552 354 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (811)
Q Consensus 354 e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~ 433 (811)
+.+ ..+++|+|+|+.+. .+.++...++++..+...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 34789999998643 24455677888888877777665432 34799999999888899999999999999
Q ss_pred EEEecCCccccCC---CChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceee
Q 003552 434 CTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 510 (811)
Q Consensus 434 v~t~H~l~~~k~~---~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v 510 (811)
|+|.|+....+.. .....+..+...|.+..+...+..+++.+|.||++|.+++.. + +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------Q------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------H------------HHh
Confidence 9999986432211 111112222333444445456778999999999999765431 0 111
Q ss_pred eccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHH
Q 003552 511 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 590 (811)
Q Consensus 511 ~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~L 590 (811)
..|++ +.|+.+||||+|.+.|.|......... +.. ..+.++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~~-----~~~-------~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETSE-----IDN-------LLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccchh-----HHH-------HHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 12333 679999999999999987532211000 000 0011222 4567899999999999999999
Q ss_pred HHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcc---c
Q 003552 591 VECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT---K 666 (811)
Q Consensus 591 leA~~~l~~~~~~v~LV-IVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~a---a 666 (811)
++|++++.+..+..+++ |+|+|++ .+....+..++.+++..+++++++.++|+|+| .++.+++..+|+.+ +
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~ 341 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSR 341 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcC
Confidence 99998764333334554 4576654 12222222344566788899999999999999 66778898888742 2
Q ss_pred cEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003552 667 GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (811)
Q Consensus 667 dvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 746 (811)
|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +||+.+++|+++|
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a 417 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRNG 417 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999996655 8999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHH
Q 003552 747 LKRIYERYTWKIYSERLMTLA 767 (811)
Q Consensus 747 ~~~v~e~yswe~~a~~ll~Ly 767 (811)
++++.++|||+.++++++++.
T Consensus 418 ~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 418 IEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999875
No 7
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.9e-45 Score=435.86 Aligned_cols=514 Identities=16% Similarity=0.190 Sum_probs=365.7
Q ss_pred CCHHHHHHHHHHHHHHhcCCCCCCC--------chhHHHHhhhccCccCCCCcHHHHHHHH---------HHHHHhhcCC
Q 003552 201 QSISRLQSSLSKAEDHLSKLPPDTP--------FSQFEYVLQGMGFEKGWGDTAEHVLEMM---------HLLLDILQAP 263 (811)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~gwg~~~~r~~~~~---------~~~~~~~~~p 263 (811)
++++.+|+.|.+..+.-++...+.| |+++..++++|=+++-.+.+.+..+..| ....++.+.+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~~~ 462 (977)
T PLN02939 383 ESIKEFQDTLSKLKEESKKRSLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKN 462 (977)
T ss_pred HHHHHHHHHHHHHHhhhhcccccCchhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhcCc
Confidence 4688899999999999999888887 9999999999999999999999998888 4778899999
Q ss_pred CcchHHHHhcC--C--CCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEec
Q 003552 264 DPSTLEKFLGR--L--PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTR 339 (811)
Q Consensus 264 ~~~~le~f~~~--~--pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~ 339 (811)
|...+..|+.- . .+.|||++||.-..|- ..+||..-++. .|.++|+++||+|. |+++
T Consensus 463 ~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~----VIlP 523 (977)
T PLN02939 463 EREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE----IVLP 523 (977)
T ss_pred hHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEeC
Confidence 99999998852 2 2469999999876643 56999998888 67778899999999 9999
Q ss_pred cCCCCCCCccc-c-----cee-eecC-----------ccCeEEEEecCccccccccccccccCchh---hHH---HHHHH
Q 003552 340 LIPDAKGTTCN-Q-----RLE-RVSG-----------TEHTHILRVPFRSEKGILRQWISRFDVWP---YLE---TFTED 395 (811)
Q Consensus 340 ~~p~~~~~~~~-~-----~~e-~i~~-----------~~~v~Ilrvp~~~~~~~~~~~isr~~i~~---~l~---~f~~~ 395 (811)
.++........ . ... ...+ .+++.++.+....... +..|..++. ..+ .|...
T Consensus 524 ~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~~----fF~R~~iYg~~Dn~~RF~~FsrA 599 (977)
T PLN02939 524 KYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSK----FFWRAQYYGEHDDFKRFSYFSRA 599 (977)
T ss_pred CCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCchh----ccCCCCCCCCccHHHHHHHHHHH
Confidence 87643210000 0 000 0000 0233333332100000 111222221 111 34444
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH------cCCcEEEEecCCccccCCC-Chh-----hHhhhh--hh--h
Q 003552 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYK------MGITQCTIAHALEKTKYPD-SDI-----YWKKFD--EK--Y 459 (811)
Q Consensus 396 ~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~------lgvp~v~t~H~l~~~k~~~-s~~-----~~~~~~--~~--y 459 (811)
++..+. ....+|||||+|+|.+++++.++.+. .++|.|+|+|++.....-. ..+ .+..+. .. .
T Consensus 600 aLe~~~-~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~ 678 (977)
T PLN02939 600 ALELLY-QSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQD 678 (977)
T ss_pred HHHHHH-hcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhh
Confidence 444433 33679999999999999986655542 3578999999997554221 111 111110 00 0
Q ss_pred hhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchH
Q 003552 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (811)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~ 539 (811)
++..++..-+.++..||.|+|+|+........ .+.+ .|.+. +.....|+.+|+||||.+.|.|.++.
T Consensus 679 ~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t-e~G~------GL~~~------L~~~~~Kl~gIlNGID~e~wnPatD~ 745 (977)
T PLN02939 679 NAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS-EGGR------GLQDT------LKFHSKKFVGILNGIDTDTWNPSTDR 745 (977)
T ss_pred ccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH-Hhcc------chHHH------hccccCCceEEecceehhhcCCcccc
Confidence 12223334455677899999999998765432 1101 01111 12236799999999999999987542
Q ss_pred HHHHhhhhcchhhhccCccccccccCCCCC-CCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCC
Q 003552 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSD-RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKS 618 (811)
Q Consensus 540 ~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~-~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~ 618 (811)
.-...--...++...-.+...++++|+..+ ++.|+|+++||+.++||++.+++|+.++.+ ++++|+|+|+|+.
T Consensus 746 ~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGdGp~---- 819 (977)
T PLN02939 746 FLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGSSPV---- 819 (977)
T ss_pred ccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeCCCc----
Confidence 100000001111122233445667887432 467999999999999999999999998865 4799999999976
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC
Q 003552 619 KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 698 (811)
Q Consensus 619 ~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G 698 (811)
....+.++.+++++++.++|+|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+|+|++++|
T Consensus 820 -----~~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vG 889 (977)
T PLN02939 820 -----PHIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTG 889 (977)
T ss_pred -----HHHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCCEEEecCC
Confidence 123567889999999999999999 556566678888 4999999999999999999999999999999999
Q ss_pred Cccccccc---------CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 699 GPAEIIEH---------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 699 G~~EiI~d---------g~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
|..|+|.+ +.+||+|+++|+++++++|.+++..+..||+.|++|++++. .+.|||+.++++|+++|+.
T Consensus 890 GL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~qYeeLY~~ 966 (977)
T PLN02939 890 GLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQYEELYQR 966 (977)
T ss_pred CCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHH
Confidence 99999875 57999999999999999999888766789999999998764 3789999999999999875
Q ss_pred h
Q 003552 770 Y 770 (811)
Q Consensus 770 ~ 770 (811)
.
T Consensus 967 l 967 (977)
T PLN02939 967 A 967 (977)
T ss_pred H
Confidence 4
No 8
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.8e-43 Score=406.57 Aligned_cols=426 Identities=18% Similarity=0.205 Sum_probs=289.2
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcc-ccceeee-
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERV- 356 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~-~~~~e~i- 356 (811)
|||++||.+.+|. ..+||...++. .|+++|+++||+|. |+|+.++....... ......+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998854 35899999999 77778899999999 99988754321100 0000010
Q ss_pred --------cCccCeEEEEecCccccccccccccccCchhh---HHH---HHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003552 357 --------SGTEHTHILRVPFRSEKGILRQWISRFDVWPY---LET---FTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (811)
Q Consensus 357 --------~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~---l~~---f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva 422 (811)
...+++++++++.... ..+..++.+ ..+ |...+...+. .+..+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~~~-~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEFAE-GLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHHHH-hcCCCCceEEECCcHHHHHH
Confidence 0124677777764221 111222222 122 3444444433 34569999999999999998
Q ss_pred HHHHHHc-----CCcEEEEecCCccccCCCC-hhh-----Hhhh-hhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhcc
Q 003552 423 SLLAYKM-----GITQCTIAHALEKTKYPDS-DIY-----WKKF-DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 490 (811)
Q Consensus 423 ~lla~~l-----gvp~v~t~H~l~~~k~~~s-~~~-----~~~~-~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k 490 (811)
.++++.+ ++|+|+|+|++........ ... +..+ .....+...+...+.++..||.|+|+|+...+...
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888663 7999999999865431110 000 0000 00111112233455689999999999988765332
Q ss_pred ccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhh-cchhhhccCccccccccCCCCC
Q 003552 491 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLFDPEQNDEHVGTLSD 569 (811)
Q Consensus 491 ~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~i~~~l~~~~~~~~~~g~l~~ 569 (811)
+....| .+.+. +.....|+.+||||+|.+.|.|.++..... .+. ..++.....+...++++|+. +
T Consensus 214 ~~~~~~------gl~~~------~~~~~~ki~vI~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~gl~-~ 279 (466)
T PRK00654 214 TPEFGY------GLEGL------LRARSGKLSGILNGIDYDIWNPETDPLLAA-NYSADDLEGKAENKRALQERFGLP-D 279 (466)
T ss_pred cccCCc------ChHHH------HHhcccCceEecCCCCccccCCccCccccc-ccChhhhhchHHHHHHHHHHhCCC-C
Confidence 210000 00000 011256899999999999998864321000 000 00000001112234567773 3
Q ss_pred CCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-ecc
Q 003552 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAA 648 (811)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f-lG~ 648 (811)
.+.++|+++||+++.||++.+++|++++.+. +++|+|+|+|.. ...+.+++++++++ +++.+ .|
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g- 344 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIG- 344 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEe-
Confidence 4688999999999999999999999998763 799999998854 23567888888886 45665 44
Q ss_pred ccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccC------CcEEEECCCCHHHHH
Q 003552 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQAA 722 (811)
Q Consensus 649 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg------~~G~li~p~D~e~lA 722 (811)
.+.+.+..+++ ++|+||+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|+|+++++
T Consensus 345 ----~~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la 419 (466)
T PRK00654 345 ----YDEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLL 419 (466)
T ss_pred ----CCHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHH
Confidence 23344556777 5999999999999999999999999999999999999999988 899999999999999
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 723 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
++|.++++ +..|++.|++|++++++ ++|||+.++++++++|+.
T Consensus 420 ~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 420 RALRRALE-LYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 99988763 23578889999888863 689999999999999974
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=5.3e-43 Score=393.58 Aligned_cols=399 Identities=22% Similarity=0.329 Sum_probs=296.6
Q ss_pred EEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCcc
Q 003552 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360 (811)
Q Consensus 281 I~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~ 360 (811)
|++++.|+.|.. +.+..+.||.++|+. +|+++|+++||+|+ |+|.......+. ......
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-------~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-------VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-------ccccCC
Confidence 678899987643 345556799999999 78888899999999 999764322111 111224
Q ss_pred CeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003552 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (811)
Q Consensus 361 ~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l 440 (811)
++++.+++..+..+ .....+..++..|.....+.+......+||+||+|.+.+++.+.++++..++|+|+|.|+.
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 67888887654321 1111122222234434443333333458999999998888888888889999999999986
Q ss_pred ccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCc
Q 003552 441 EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPK 520 (811)
Q Consensus 441 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k 520 (811)
...+. .++........ ......+...++.+|.|+++|....+...+ . .|.+ ..|
T Consensus 135 ~~~~~----~~~~~~~~~~~-~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~---~----------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVKN----AALADGDTPEP-EARRIGEQQLVDNADRLIANTDEEARDLVR---H----------------YDAD--PDR 188 (405)
T ss_pred HHHHH----HhccCCCCCch-HHHHHHHHHHHHhcCeEEECCHHHHHHHHH---H----------------cCCC--hhh
Confidence 43210 00000000000 011123456789999999999876552211 1 1222 678
Q ss_pred EEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhcc
Q 003552 521 FNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600 (811)
Q Consensus 521 ~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~ 600 (811)
+.+||||+|.+.|.|......+ .++++ ++++++|+++||+.+.||++.+++|++++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATER-------------------ARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHHH-------------------HhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 9999999999988765322211 23555 46788999999999999999999999999776
Q ss_pred CCC--eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCC
Q 003552 601 REL--VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (811)
Q Consensus 601 ~~~--v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 678 (811)
.++ ++|+|+|++..+ ...+.+.++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 999999974320 0123567888999999999999999 7788999999995 9999999999999
Q ss_pred CHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003552 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 758 (811)
Q Consensus 679 GltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~ 758 (811)
|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999997665 79999999999999987 7899999
Q ss_pred HHHHHHHHHHH
Q 003552 759 YSERLMTLAGV 769 (811)
Q Consensus 759 ~a~~ll~Ly~~ 769 (811)
++++++++|+.
T Consensus 391 ~~~~~~~~y~~ 401 (405)
T TIGR03449 391 TADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=5.2e-42 Score=395.06 Aligned_cols=435 Identities=18% Similarity=0.205 Sum_probs=295.4
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccc-----ce
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ-----RL 353 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~-----~~ 353 (811)
|||++||...+|. -.+||+..++. .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998753 35899999999 77777899999999 9998876432110000 00
Q ss_pred --------ee----ecCccCeEEEEecCccc-c--c-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC
Q 003552 354 --------ER----VSGTEHTHILRVPFRSE-K--G-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD 417 (811)
Q Consensus 354 --------e~----i~~~~~v~Ilrvp~~~~-~--~-~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~ 417 (811)
.. ....+++.++++..... + + ++.. ...+.......|...+...+.. ...+|||||+|+|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~r~~~~y~~--~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw~ 138 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDRPGGIYGD--DYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDWH 138 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHHcCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCcH
Confidence 00 01113456666543210 0 0 1100 0001111112344445444443 46799999999999
Q ss_pred chHHHHHHHHHcC---CcEEEEecCCccccCCCC-hhhH-----hhhh-hhhhhhhhhhHHHHHHhhCCEEEecCHHHHh
Q 003552 418 GNLVASLLAYKMG---ITQCTIAHALEKTKYPDS-DIYW-----KKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (811)
Q Consensus 418 ~~lva~lla~~lg---vp~v~t~H~l~~~k~~~s-~~~~-----~~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (811)
+++++.++++..+ +|.|+|+|++........ ...+ ..+. ..+.+...+...+.++..||.|+|+|+...+
T Consensus 139 ~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ 218 (473)
T TIGR02095 139 TALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAR 218 (473)
T ss_pred HHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHH
Confidence 9999998888876 999999999864332111 1111 0000 1111111334456789999999999988765
Q ss_pred hccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCC
Q 003552 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTL 567 (811)
Q Consensus 488 ~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l 567 (811)
.+.... + .+.+.+. +.....++.+|+||+|.+.|.|..+......--....+.....+...++++|+.
T Consensus 219 ei~~~~--~----~~~l~~~------l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 219 EILTPE--F----GYGLDGV------LKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLP 286 (473)
T ss_pred HhcCCc--C----CccchhH------HHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCC
Confidence 332210 0 0001000 011256899999999999998854321000000000000001112334567875
Q ss_pred CCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003552 568 SDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (811)
Q Consensus 568 ~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (811)
.++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|.. ...+.+++++++++ +++.+.+
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~v~~~~ 352 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GNVRVII 352 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--CcEEEEE
Confidence 445889999999999999999999999998753 599999999853 23567777777764 5788887
Q ss_pred cccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccC------CcEEEECCCCHHHH
Q 003552 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQA 721 (811)
Q Consensus 648 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg------~~G~li~p~D~e~l 721 (811)
..+.+++..+++. +|++|+||.+|+||++++|||+||+|+|+|+.||..|+|.++ .+|+++++.|++++
T Consensus 353 ----~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~l 427 (473)
T TIGR02095 353 ----GYDEALAHLIYAG-ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427 (473)
T ss_pred ----cCCHHHHHHHHHh-CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHH
Confidence 5566777788884 999999999999999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 722 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 722 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
+++|.+++....+||+.|++|+++++ .++|||+.++++|+++|+.
T Consensus 428 a~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 428 LAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHHHHHHHHHHHh
Confidence 99998887555559999999999886 3689999999999999974
No 11
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=2.4e-41 Score=375.91 Aligned_cols=397 Identities=33% Similarity=0.553 Sum_probs=302.7
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||+|++.|+.|.. .-|.|+.||.++++. .|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 6889999986532 235689999999999 77777899999999 998654332111 01122
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (811)
.++.+.+++..+.. ..++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36778887764432 1233446667767777666666543 23899999999888888888999999999999998
Q ss_pred CccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003552 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (811)
Q Consensus 440 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~ 519 (811)
+...........|. +........+..+++.||.|+++|.......... | +. ...
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~---~----------------~~--~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL---Y----------------GA--YPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH---c----------------cc--ccc
Confidence 76543222111111 1112223346678999999999998765422111 0 11 145
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhc
Q 003552 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (811)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 599 (811)
++.+||||+|.+.|.+........ +..+. ..++++|+++||+.+.||++.+++|+.++.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEARR------------------ARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhHH------------------Hhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 689999999998887654322110 11222 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCC
Q 003552 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (811)
Q Consensus 600 ~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG 679 (811)
..++++|+++|++..... ......++++++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDIL------AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcch------hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 788999999999876211 122344778888999999999999 7788999999996 99999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003552 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 759 (811)
Q Consensus 680 ltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~ 759 (811)
++++|||+||+|||+|+.||..|+++++.+|++++++|+++++++|.+++ +|++.+++|++++++++.++|||+.+
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999996655 89999999999999999999999999
Q ss_pred HHHHH
Q 003552 760 SERLM 764 (811)
Q Consensus 760 a~~ll 764 (811)
+++++
T Consensus 393 ~~~~~ 397 (398)
T cd03800 393 AARLL 397 (398)
T ss_pred HHHHh
Confidence 99886
No 12
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.7e-40 Score=375.01 Aligned_cols=397 Identities=13% Similarity=0.127 Sum_probs=284.9
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccC--CCCC-CCccccceee
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI--PDAK-GTTCNQRLER 355 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~--p~~~-~~~~~~~~e~ 355 (811)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+.. |... ..........
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998876 56789999998 77888899999999 999752 2110 0000100111
Q ss_pred ecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcE
Q 003552 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQ 433 (811)
Q Consensus 356 i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~--~lva~lla~~lgvp~ 433 (811)
.....+++++|+|...... ...+. .+.. ...|.......+......+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123478999988643210 00011 1111 112333333443333236899999997653 456677888899999
Q ss_pred EEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003552 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (811)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~G 513 (811)
++++|+.+......... ++ ......+.. ..+..+++.||.||++|....+..+ ..|
T Consensus 135 v~~~~d~~~~~~~~~~~-~~-~~~~~~~~~--~~~~~~~~~ad~ii~~S~~~~~~~~--------------------~~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGL-LK-GGKVARLAT--AFERSLLRRFDNVSTISRSMMNKAR--------------------EKG 190 (412)
T ss_pred EEEeccCCHHHHHHhCC-cc-CcHHHHHHH--HHHHHHHhhCCEEEecCHHHHHHHH--------------------HcC
Confidence 99999865321000000 00 000001111 2366789999999999988765211 123
Q ss_pred CCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHH
Q 003552 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (811)
Q Consensus 514 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA 593 (811)
++ ..++.+||||+|.+.|.|....... ..++.+++ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 6789999999999988765321100 01123555 5667899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecC
Q 003552 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (811)
Q Consensus 594 ~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS 673 (811)
++++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999987 67788899999996 799999 6778899999995 99999999
Q ss_pred CCCC----CCHHHHHHHHcCCCEEEcCCCC--cccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003552 674 FYEA----FGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (811)
Q Consensus 674 ~~E~----fGltvlEAMa~GlPVIAT~~GG--~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 747 (811)
..|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|+++++++|.+++ +|++.+++|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 9998 5777999999999999998876 458886 5899999999999999996554 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHh
Q 003552 748 KRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 748 ~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
+++.++|||+.++++++++|+..
T Consensus 386 ~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 386 EYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHH
Confidence 99999999999999999998743
No 13
>PLN02316 synthase/transferase
Probab=100.00 E-value=2.9e-40 Score=398.46 Aligned_cols=405 Identities=15% Similarity=0.094 Sum_probs=281.6
Q ss_pred cceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccc-cce-ee
Q 003552 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRL-ER 355 (811)
Q Consensus 278 ~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~-~~~-e~ 355 (811)
+|||++||.+..|- ..+||...+|. .|+++|++.||+|. |+|+.++........ ... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 59999999998753 35899999999 77777899999999 999987642100000 000 00
Q ss_pred e-----------cCccCeEEEEecCccccccccccccccCch------hhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003552 356 V-----------SGTEHTHILRVPFRSEKGILRQWISRFDVW------PYLETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (811)
Q Consensus 356 i-----------~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~------~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~ 418 (811)
+ ...+++.++.+.... +++ .+..++ .....|...++..+.. ...+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~~F----~r~~~Yg~~Dd~~RF~~F~~Aale~l~~-~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--GMF----WAGCVYGCRNDGERFGFFCHAALEFLLQ-SGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--ccc----CCCCCCCchhHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCChH
Confidence 0 011234444443211 111 111111 1122344445544433 356999999999999
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhcccc
Q 003552 419 NLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 492 (811)
Q Consensus 419 ~lva~lla~~l------gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~ 492 (811)
++++.++++.+ ++|+|+|+|++.... ++ ...++..||.|+|+|+.....+..
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~- 778 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSG- 778 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHh-
Confidence 99888887753 589999999864311 00 124678999999999987653221
Q ss_pred ccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhh-cc-hhhhccCccccccccCCCCCC
Q 003552 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GS-IEQLLFDPEQNDEHVGTLSDR 570 (811)
Q Consensus 493 v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~-i~~~l~~~~~~~~~~g~l~~~ 570 (811)
.+ ++.....|+.+|+||||.+.|.|.++...... +. .. .+...-.....++.+|+. +.
T Consensus 779 --~~----------------~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~-y~~~~~~~gK~~~k~~Lr~~lGL~-~~ 838 (1036)
T PLN02316 779 --NS----------------AIAPHLYKFHGILNGIDPDIWDPYNDNFIPVP-YTSENVVEGKRAAKEALQQRLGLK-QA 838 (1036)
T ss_pred --cc----------------CcccccCCEEEEECCccccccCCccccccccc-CCchhhhhhhhhhHHHHHHHhCCC-cc
Confidence 01 12212479999999999999988643210000 00 00 000000112234567873 24
Q ss_pred CCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEecc
Q 003552 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWIAA 648 (811)
Q Consensus 571 ~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L--~~~V~flG~ 648 (811)
+.|+|+++|||+++||++.|++|+.++.+ .+++|+|+|+|+++ ...+.+.++++++++ .++|.|.|
T Consensus 839 d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~---------~~e~~l~~La~~Lg~~~~~rV~f~g- 906 (1036)
T PLN02316 839 DLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP---------RIQNDFVNLANQLHSSHHDRARLCL- 906 (1036)
T ss_pred cCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH---------HHHHHHHHHHHHhCccCCCeEEEEe-
Confidence 68999999999999999999999999865 47999999999761 235678889998876 57899987
Q ss_pred ccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccC-------------CcEEEECC
Q 003552 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG-------------ASGFHIDP 715 (811)
Q Consensus 649 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg-------------~~G~li~p 715 (811)
..+......+|+ ++|+||+||++|+||++++|||+||+|+|++++||+.|+|.++ .+||+|++
T Consensus 907 ---~~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~ 982 (1036)
T PLN02316 907 ---TYDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDG 982 (1036)
T ss_pred ---cCCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCC
Confidence 333333346777 5999999999999999999999999999999999999999884 69999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 716 ~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
.|+++++.+|.+++... ++....+++.+++.+.+.|||+.++++|+++|+.
T Consensus 983 ~d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 983 ADAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred CCHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 99999999998877422 3344556777777888899999999999999974
No 14
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.8e-40 Score=383.14 Aligned_cols=438 Identities=17% Similarity=0.194 Sum_probs=293.9
Q ss_pred CCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCc--ccc--
Q 003552 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--CNQ-- 351 (811)
Q Consensus 276 pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~--~~~-- 351 (811)
|| |||++||.--.|- ..|||..-++- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 45 9999999877643 57999887777 66777899999999 9998875432110 000
Q ss_pred ceeeec-C-ccCeEEEEec--Ccccc--c-c-cc--ccccccCch----------hhHH---HHHHHHHHHHHHHcCCCc
Q 003552 352 RLERVS-G-TEHTHILRVP--FRSEK--G-I-LR--QWISRFDVW----------PYLE---TFTEDVGSEITAELQGFP 408 (811)
Q Consensus 352 ~~e~i~-~-~~~v~Ilrvp--~~~~~--~-~-~~--~~isr~~i~----------~~l~---~f~~~~~~~i~~~~~~~P 408 (811)
....+. . .....+.++- ..+.. . + +. ....|..++ ...+ .|...++..+. ....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~-~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQ-RLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 011110 0 0011122110 00000 0 0 00 011111111 1122 23333444433 335689
Q ss_pred eEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCccccCCCChhh-----HhhhhhhhhhhhhhhHHHHHHhhCC
Q 003552 409 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDSDIY-----WKKFDEKYHFSCQFTADLIAMNNAD 476 (811)
Q Consensus 409 DlIh~h~~~~~lva~lla~~l-------gvp~v~t~H~l~~~k~~~s~~~-----~~~~~~~y~f~~~~~~e~~a~~~AD 476 (811)
||||+|+|.+++++.+++++. ++|.|+|+|++........... +........+...+...+.++..||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999998887765 7999999999865432111100 0000000011122345667899999
Q ss_pred EEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhh-cchhhhcc
Q 003552 477 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLF 555 (811)
Q Consensus 477 ~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~i~~~l~ 555 (811)
.|+|+|+...+...+. +.+ .+.+++..+ ....|+.+|+||||.+.|.|.++...+ ..+. ..++...-
T Consensus 223 ~VitVS~~~a~ei~~~-~~~----~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~-~~~~~~~~~~k~~ 290 (489)
T PRK14098 223 LLTTTSPRYAEEIAGD-GEE----AFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIK-KRYSIERLDGKLE 290 (489)
T ss_pred cceeeCHHHHHHhCcC-CCC----CcChHHHHH------hcCCCeeEEeCCccccccCCccccccc-ccCCcchhhhHHH
Confidence 9999999887644321 000 111111111 115789999999999999986542110 0000 00000011
Q ss_pred CccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003552 556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (811)
Q Consensus 556 ~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~ 635 (811)
.+...++.+|+..++++++|+++||+++.||++.+++|+.++.+ ++++|+|+|+|+. .+.+.++++++
T Consensus 291 ~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~ 358 (489)
T PRK14098 291 NKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAE 358 (489)
T ss_pred HHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHH
Confidence 12233456788666788999999999999999999999999875 4799999999864 34577888888
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCccccccc----CCcEE
Q 003552 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH----GASGF 711 (811)
Q Consensus 636 ~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~d----g~~G~ 711 (811)
++ .++|.|+| .++..++..+++. +|+||+||.+|+||++.+|||+||+|+|++++||..|.+.+ +.+|+
T Consensus 359 ~~--~~~V~~~g----~~~~~~~~~~~a~-aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~ 431 (489)
T PRK14098 359 EH--PEQVSVQT----EFTDAFFHLAIAG-LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGF 431 (489)
T ss_pred HC--CCCEEEEE----ecCHHHHHHHHHh-CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCcee
Confidence 87 47899999 6677888889984 99999999999999999999999999999999999998864 77999
Q ss_pred EECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 712 li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
+++++|+++++++|.++++ +.+|++.|+++++++. .+.|||+..+++|+++|+.
T Consensus 432 l~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 432 IFHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred EeCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 9999999999999988763 5578999999987764 4789999999999999974
No 15
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=3.1e-40 Score=371.66 Aligned_cols=366 Identities=16% Similarity=0.190 Sum_probs=273.5
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||+++++..+ |..||.+.++. +|++.|+++||+|. |+|+..+...+. + ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~--~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------R--YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------c--ccc
Confidence 6999998776 45799999999 77788899999999 998764322111 0 112
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEe
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 437 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~--lva~lla~~lgvp~v~t~ 437 (811)
.++.+.++|...... .........+...+.+.+. +.+|||||+|...+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~--------~~~~~~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN--------QSTLPTFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC--------CccccchhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888887653210 0011111112222222232 348999999987653 346677888999999999
Q ss_pred cCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003552 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (811)
Q Consensus 438 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~ 517 (811)
|+..... +..... .. ......++++|.+|++|....+.. ....+++
T Consensus 121 h~~~~~~----~~~~~~----~~-----~~~~~~~~~~d~ii~~s~~~~~~~-------------------~~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIH----TN-----KLLRFSLADVDHVICVSHTSKENT-------------------VLRASLD-- 166 (398)
T ss_pred ccccccc----chhhHH----hh-----HHHHHhhccCCEEEEecHhHhhHH-------------------HHHhCCC--
Confidence 9854211 100000 00 012346789999999998754310 0112333
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHh
Q 003552 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (811)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l 597 (811)
..|+.+||||+|.+.|.|.... .++++++|+++||+.+.||++.+++|+.++
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 6789999999999877664321 035678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCC
Q 003552 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (811)
Q Consensus 598 ~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 677 (811)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88788999999999876 567889999999999999999 7778999999995 999999999999
Q ss_pred CCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003552 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (811)
Q Consensus 678 fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe 757 (811)
||++++|||+||+|||+|+.||..|++.++. ++++ +.|+++++++|.+++ +++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~-~~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLA-EPDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeec-CCCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998764 4444 448999999997766 566666678899999999999999
Q ss_pred HHHHHHHHHHHHh
Q 003552 758 IYSERLMTLAGVY 770 (811)
Q Consensus 758 ~~a~~ll~Ly~~~ 770 (811)
.++++++++|+..
T Consensus 356 ~~~~~~~~~y~~l 368 (398)
T cd03796 356 DVAKRTEKVYDRI 368 (398)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998743
No 16
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=4.2e-40 Score=378.70 Aligned_cols=432 Identities=17% Similarity=0.156 Sum_probs=292.7
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccc--cee---
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLE--- 354 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~--~~e--- 354 (811)
||++||+-.+|- ..+||...++. .|+++|++.||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999886643 36899999999 67777899999999 9998876532110000 000
Q ss_pred ------------eecCccCeEEEEecCccccccccccc--cccCchh-h---HHHHHHHHHHHHHHHcCCCceEEEEcCC
Q 003552 355 ------------RVSGTEHTHILRVPFRSEKGILRQWI--SRFDVWP-Y---LETFTEDVGSEITAELQGFPDFIIGNYS 416 (811)
Q Consensus 355 ------------~i~~~~~v~Ilrvp~~~~~~~~~~~i--sr~~i~~-~---l~~f~~~~~~~i~~~~~~~PDlIh~h~~ 416 (811)
......++.+++++...... +.++ +....|. . ...|...+...+.. +..+|||||+|+|
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~ 138 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDW 138 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECch
Confidence 00111356666654322110 0000 0001111 1 12344444444443 3679999999999
Q ss_pred CchHHHHHHHHHc------CCcEEEEecCCccccCCCChhhHh--------hhhhhhhhhhhhhHHHHHHhhCCEEEecC
Q 003552 417 DGNLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWK--------KFDEKYHFSCQFTADLIAMNNADFIITST 482 (811)
Q Consensus 417 ~~~lva~lla~~l------gvp~v~t~H~l~~~k~~~s~~~~~--------~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (811)
.+++++..+++.. ++|+|+|+|++............. .....+.+...+..++.++..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 9988888887764 899999999986543211110000 00011122334456788999999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccccc
Q 003552 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (811)
Q Consensus 483 ~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (811)
....+.+.+..+-+ .+.+ .+.....|+.+|+||+|.+.|.|..+......-.....+.....+...++
T Consensus 219 ~~~~~~i~~~~~~~------gl~~------~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 219 PTYAREILTPEFGE------GLDG------LLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HhHHHHhCCCCCCc------chHH------HHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 88765433211000 0000 01112579999999999999988654321100000000011112223345
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (811)
++|+..++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|.. ...+.++++++++ .++
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~ 352 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGR 352 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCc
Confidence 67765457899999999999999999999999998764 499999999854 3356677777776 567
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCC------cEEEECCC
Q 003552 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA------SGFHIDPY 716 (811)
Q Consensus 643 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~------~G~li~p~ 716 (811)
|.+++ ..+..++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++. +|++++|.
T Consensus 353 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 353 VAVLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred EEEEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 88776 345556667777 49999999999999999999999999999999999999999988 99999999
Q ss_pred CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 717 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 717 D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
|+++++++|.++++ ...+++.|.++++++++ +.|||+.++++|+++|+
T Consensus 428 ~~~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 428 NADALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CHHHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 99999999988764 34578999999888765 46999999999999986
No 17
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2.4e-39 Score=373.40 Aligned_cols=436 Identities=16% Similarity=0.182 Sum_probs=282.1
Q ss_pred cceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccc--ceee
Q 003552 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLER 355 (811)
Q Consensus 278 ~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~--~~e~ 355 (811)
.|||++||.--.| ...|||..-++- .|.++|+++||+|. |+++.+..-... ... ....
T Consensus 3 ~~~il~v~~E~~p-------~~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFP-------LIKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEecccc-------ccCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 5899999987664 357999887777 66778899999999 999887543211 110 0111
Q ss_pred ecCc-c-CeEEEEecCccccc-cc--ccccccc----------CchhhHHH---HHHHHHHHHHHHc--CCCceEEEEcC
Q 003552 356 VSGT-E-HTHILRVPFRSEKG-IL--RQWISRF----------DVWPYLET---FTEDVGSEITAEL--QGFPDFIIGNY 415 (811)
Q Consensus 356 i~~~-~-~v~Ilrvp~~~~~~-~~--~~~isr~----------~i~~~l~~---f~~~~~~~i~~~~--~~~PDlIh~h~ 415 (811)
+... . .+++......+-.- ++ ..+..|. +.....++ |...++. +.... ..+|||||+|+
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~-~~~~~~~~~~pDIiH~Hd 141 (485)
T PRK14099 63 FPDLFGGPARLLAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAA-IGQGLVPGFVPDIVHAHD 141 (485)
T ss_pred EeeeCCceEEEEEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHH-HHhhhccCCCCCEEEECC
Confidence 1100 0 11222211100000 00 0011111 11112222 3333333 22221 46999999999
Q ss_pred CCchHHHHHHHH--HcCCcEEEEecCCccccCCCChh------hHhhhh-hhhhhhhhhhHHHHHHhhCCEEEecCHHHH
Q 003552 416 SDGNLVASLLAY--KMGITQCTIAHALEKTKYPDSDI------YWKKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (811)
Q Consensus 416 ~~~~lva~lla~--~lgvp~v~t~H~l~~~k~~~s~~------~~~~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (811)
|.+++++.++.. ..++|.|+|+|++.....-.... .+..+. ....+.......+.++..||.|+|+|+...
T Consensus 142 w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a 221 (485)
T PRK14099 142 WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYA 221 (485)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHH
Confidence 999888876653 24689999999986543211110 011000 001111122235678999999999998876
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCC
Q 003552 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (811)
Q Consensus 487 ~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~ 566 (811)
+...+....+ .+.+. +.....|+.+|+||+|.+.|.|.++......--...++.........++.+|+
T Consensus 222 ~ei~~~~~g~------gl~~~------l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl 289 (485)
T PRK14099 222 LEIQGPEAGM------GLDGL------LRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGL 289 (485)
T ss_pred HHHhcccCCc------ChHHH------HHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCC
Confidence 5332210000 00000 01125789999999999999886542100000000000000011223456787
Q ss_pred CCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-EE
Q 003552 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF-RW 645 (811)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V-~f 645 (811)
..+++.++|+++||++++||++.|++|+.++.+ .+++|+|+|+|.. ...+.+++++++++ +++ .|
T Consensus 290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~--~~v~~~ 355 (485)
T PRK14099 290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP--GQIGVV 355 (485)
T ss_pred CcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--CCEEEE
Confidence 444578899999999999999999999998865 4799999999864 23567778887764 455 68
Q ss_pred eccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccC---------CcEEEECCC
Q 003552 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHIDPY 716 (811)
Q Consensus 646 lG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg---------~~G~li~p~ 716 (811)
+|+ .+++..+|..++|+||+||.+|+||++++|||+||+|+|+|++||..|+|.++ .+|++++|+
T Consensus 356 ~G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~ 429 (485)
T PRK14099 356 IGY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV 429 (485)
T ss_pred eCC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC
Confidence 883 46788877535999999999999999999999999999999999999999876 689999999
Q ss_pred CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 717 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 717 D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
|+++++++|.+++. +.+|++.|++|+++++ .++|||+.++++++++|+..
T Consensus 430 d~~~La~ai~~a~~-l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 430 TADALAAALRKTAA-LFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred CHHHHHHHHHHHHH-HhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHH
Confidence 99999999987542 4589999999999986 37899999999999999754
No 18
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=6.3e-39 Score=362.78 Aligned_cols=281 Identities=17% Similarity=0.242 Sum_probs=231.5
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--HcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecC
Q 003552 405 QGFPDFIIGNYSDGNLVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lva~lla~--~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (811)
+.+||+||+|++..+..+..+++ ..+.|.++|+|+...... .....+.. .....+++||.|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~--------~~~~~~~~-----~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSR--------EVLNHYTP-----EYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccc--------hhhhhhhH-----HHHHHHHhCCEEEECC
Confidence 45899999999887777777765 345577899998543211 00011110 1224678999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccccc
Q 003552 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (811)
Q Consensus 483 ~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (811)
....+.+. ..|++ ..|+.+||||+|.+.|.+....
T Consensus 183 ~~~~~~l~--------------------~~g~~--~~ki~vi~nGvd~~~f~~~~~~----------------------- 217 (406)
T PRK15427 183 DLWAGRLQ--------------------KMGCP--PEKIAVSRMGVDMTRFSPRPVK----------------------- 217 (406)
T ss_pred HHHHHHHH--------------------HcCCC--HHHEEEcCCCCCHHHcCCCccc-----------------------
Confidence 87655211 12333 6799999999999888653211
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (811)
...++..|+++||+.+.||++.+++|++++.+..++++|+|+|+|+. .++++++++++++.++
T Consensus 218 -----~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 218 -----APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred -----cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 02345679999999999999999999999988788999999999977 6789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEecCCC------CCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCC
Q 003552 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716 (811)
Q Consensus 643 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~------E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~ 716 (811)
|.|+| .++.+++..+++. +|+||+||.. ||||++++|||+||+|||+|+.||..|+|.+|.+|++++++
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 7788999999996 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 717 HPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 717 D~e~lA~aI~~~l~~l~~-dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
|+++++++|.+++ + ||+.+++|+++|++++.++|||+..++++.++|+.
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999996654 7 99999999999999999999999999999999864
No 19
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=8.5e-39 Score=356.18 Aligned_cols=378 Identities=22% Similarity=0.307 Sum_probs=273.2
Q ss_pred ceEEEEcccccccccccCCCCC-cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeec
Q 003552 279 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~-~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~ 357 (811)
|||++++..++ |+ .||.++++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987655 34 499999999 666677776 7777 66643211 0
Q ss_pred CccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003552 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (811)
Q Consensus 358 ~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~ 437 (811)
...++.+.+++.... .......+..+..++. ......+||+||+|.+.+++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSE---------LKEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhh---------ccchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 123466766653221 0011112222222221 1111347999999998877777777778899999999
Q ss_pred cCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003552 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (811)
Q Consensus 438 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~ 517 (811)
|++......... .....+.+.. ..+..+++.+|.||++|....+...+. | .|++
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~---~---------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKY---Y---------------PDLD-- 167 (388)
T ss_pred eccccccccccc----ccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHH---c---------------CCCC--
Confidence 987542210000 0111111111 235678899999999998765522111 0 1232
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHh
Q 003552 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (811)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l 597 (811)
..++.+||||+|.+.|.|......+ ..+|+ ++++++|+++||+.+.||++.|++|++++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVVL-------------------DRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHHH-------------------HHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 5789999999999988775332211 23454 56788999999999999999999999988
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChHHHHHHHHccccEEEecCCCC
Q 003552 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (811)
Q Consensus 598 ~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L-~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E 676 (811)
. ++++++++|++++ ..+..+.+++.+.+++. .++|.|++ +.++.+++..+++. +|+||+||.+|
T Consensus 227 ~---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e 291 (388)
T TIGR02149 227 P---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYE 291 (388)
T ss_pred h---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccC
Confidence 5 4789999998765 11234566777777765 34588765 26778999999995 99999999999
Q ss_pred CCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCH------HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003552 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP------DQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (811)
Q Consensus 677 ~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~------e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 750 (811)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|. ++++++|.+ +++||+.+++|++++++.+
T Consensus 292 ~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINI----LLADPELAKKMGIAGRKRA 367 (388)
T ss_pred CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHH----HHhCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988 788888855 4489999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHH
Q 003552 751 YERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 751 ~e~yswe~~a~~ll~Ly~~ 769 (811)
.++|||+.+++++.++|+.
T Consensus 368 ~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 368 EEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHhCCHHHHHHHHHHHHHh
Confidence 9999999999999999874
No 20
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=6.6e-39 Score=368.58 Aligned_cols=379 Identities=16% Similarity=0.238 Sum_probs=268.0
Q ss_pred CCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceee
Q 003552 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 355 (811)
Q Consensus 276 pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~ 355 (811)
-++|||++++ +.+| .+..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 3468999996 3321 145799999999 77778899999999 998653211 00
Q ss_pred ecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEE
Q 003552 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQC 434 (811)
Q Consensus 356 i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~-~lva~lla~~lgvp~v 434 (811)
. .++.+++++.... +.. .... +.+ .+...+.+.+. +.+|||||+|.... .+.+..+++..++|+|
T Consensus 107 ~---~g~~v~~~~~~~~-~~~----~~~~-~~~--~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 F---HGAKVIGSWSFPC-PFY----QKVP-LSL--ALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred c---cCceeeccCCcCC-ccC----CCce-eec--cCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 1 1334443322111 000 0000 000 01112333333 34899999998653 3455667788999999
Q ss_pred EEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003552 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (811)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi 514 (811)
++.|+......+.....+ .... . +...+..++.+|.|+++|....+...+ .|.
T Consensus 173 ~~~h~~~~~~~~~~~~~~--~~~~---~--~~~~r~~~~~ad~ii~~S~~~~~~l~~--------------------~~~ 225 (465)
T PLN02871 173 MSYHTHVPVYIPRYTFSW--LVKP---M--WDIIRFLHRAADLTLVTSPALGKELEA--------------------AGV 225 (465)
T ss_pred EEEecCchhhhhcccchh--hHHH---H--HHHHHHHHhhCCEEEECCHHHHHHHHH--------------------cCC
Confidence 999986432211111111 0000 0 112345678999999999876552211 111
Q ss_pred CCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHH
Q 003552 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (811)
Q Consensus 515 ~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~ 594 (811)
....++.+||||+|.+.|.|......... .+.. ..+++++|+|+||+.+.||++.+++++
T Consensus 226 -~~~~kv~vi~nGvd~~~f~p~~~~~~~~~------------------~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 226 -TAANRIRVWNKGVDSESFHPRFRSEEMRA------------------RLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred -CCcCeEEEeCCccCccccCCccccHHHHH------------------HhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 11568999999999999977543221111 1111 134678999999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCC
Q 003552 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (811)
Q Consensus 595 ~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~ 674 (811)
+++ ++++|+|+|+|+. .+.++++++. .+|.|+| .++.+++..+|+. +|+||+||.
T Consensus 286 ~~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~ 340 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSE 340 (465)
T ss_pred HhC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCc
Confidence 876 5799999999876 4566666653 3699999 6777899999995 999999999
Q ss_pred CCCCCHHHHHHHHcCCCEEEcCCCCccccccc---CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003552 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (811)
Q Consensus 675 ~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~d---g~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 751 (811)
.|+||++++|||+||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.+++ +|++.+++|++++++++
T Consensus 341 ~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~- 415 (465)
T PLN02871 341 SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV- 415 (465)
T ss_pred ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999 99999999999999999996655 89999999999999998
Q ss_pred HhCCHHHHHHHHHH-HHHHh-hhhH
Q 003552 752 ERYTWKIYSERLMT-LAGVY-GFWK 774 (811)
Q Consensus 752 e~yswe~~a~~ll~-Ly~~~-~f~~ 774 (811)
++|||+.+++++++ +|+.. -+|+
T Consensus 416 ~~fsw~~~a~~l~~~~Y~~~~~~~~ 440 (465)
T PLN02871 416 EKWDWRAATRKLRNEQYSAAIWFWR 440 (465)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999998 68755 4444
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.5e-38 Score=349.17 Aligned_cols=366 Identities=19% Similarity=0.295 Sum_probs=267.5
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecC
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~ 358 (811)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 68999973 34699999999 77778899999999 88865322100 01
Q ss_pred ccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH----cCCcEE
Q 003552 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK----MGITQC 434 (811)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~----lgvp~v 434 (811)
.++..+..++.... + ......+.......+.+.+. ..+||+||+|++.+...+..++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-P-------LFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-c-------hhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333322111 0 00111111222333333333 459999999987654444444432 289999
Q ss_pred EEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003552 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (811)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi 514 (811)
++.|+....... ....+. ...+.+++.+|.|++.|....+...+. |
T Consensus 116 ~~~h~~~~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~---~------------------ 161 (371)
T cd04962 116 TTLHGTDITLVG--------QDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL---F------------------ 161 (371)
T ss_pred EEEcCCcccccc--------ccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh---c------------------
Confidence 999975321110 011111 123457889999999998765522110 0
Q ss_pred CCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHH
Q 003552 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (811)
Q Consensus 515 ~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~ 594 (811)
....++.+||||+|...|.+......+ ..++. .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 115689999999998877664432211 12444 45778899999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCC
Q 003552 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (811)
Q Consensus 595 ~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~ 674 (811)
.++.+. .+++|+++|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 4689999999977 56788889999999999999943 357888885 999999999
Q ss_pred CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
Q 003552 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 754 (811)
Q Consensus 675 ~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~y 754 (811)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +||+.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999996654 899999999999999988999
Q ss_pred CHHHHHHHHHHHHHH
Q 003552 755 TWKIYSERLMTLAGV 769 (811)
Q Consensus 755 swe~~a~~ll~Ly~~ 769 (811)
||+.+++++.++|+.
T Consensus 356 s~~~~~~~~~~~y~~ 370 (371)
T cd04962 356 DSERIVPQYEALYRR 370 (371)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999863
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.4e-37 Score=348.70 Aligned_cols=375 Identities=15% Similarity=0.206 Sum_probs=274.3
Q ss_pred CcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeee
Q 003552 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (811)
Q Consensus 277 m~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i 356 (811)
|+-||++++.--+|-|. ...||+++++. +++++|+. +|+ |+|...+.-. ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 77899998877665432 34799999999 66666743 999 9998765311 011
Q ss_pred cCccCeEEEEecCccccc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003552 357 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (811)
Q Consensus 357 ~~~~~v~Ilrvp~~~~~~-~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~ 435 (811)
...+++.|.++++....+ ...+|.+. ..+ .|...+...+......++||||+|... .+...+..+..++|.+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 111246666766643211 22233222 222 333444444433324579999999754 34454555556789999
Q ss_pred EecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003552 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (811)
Q Consensus 436 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~ 515 (811)
+.|+.... ..+..++.||++|....+... .+.
T Consensus 127 ~~h~~~~~--------------------------~~~~~~~~ii~~S~~~~~~~~---------------------~~~- 158 (380)
T PRK15484 127 HMHNAFEP--------------------------ELLDKNAKIIVPSQFLKKFYE---------------------ERL- 158 (380)
T ss_pred EEecccCh--------------------------hHhccCCEEEEcCHHHHHHHH---------------------hhC-
Confidence 99963210 123467899999987654111 111
Q ss_pred CCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHH
Q 003552 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (811)
Q Consensus 516 ~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~ 595 (811)
+..++.+||||+|.+.|.+......+ +.+|+ +.++++|+|+||+.+.||++.|++|+.
T Consensus 159 -~~~~i~vIpngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 159 -PNADISIVPNGFCLETYQSNPQPNLR-------------------QQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -CCCCEEEecCCCCHHHcCCcchHHHH-------------------HHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 25689999999999888765432211 22454 456789999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCC
Q 003552 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (811)
Q Consensus 596 ~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~ 675 (811)
++.+..++++|+|+|+++.. .+.+...+.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~---~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS---SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc---cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 99888899999999998652 11223345667777887765 5799999 6778899999995 9999999975
Q ss_pred -CCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEE-EECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 003552 676 -EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (811)
Q Consensus 676 -E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~-li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~ 753 (811)
|+||++++|||+||+|||+|+.||+.|++.++.+|+ +++|.|+++++++|.+++ +|++. .+++++|++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 568999999999996554 89985 77999999999999
Q ss_pred CCHHHHHHHHHHHHHHh
Q 003552 754 YTWKIYSERLMTLAGVY 770 (811)
Q Consensus 754 yswe~~a~~ll~Ly~~~ 770 (811)
|||+.++++++++|+.+
T Consensus 362 fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 362 YSWEGVTQRFEEQIHNW 378 (380)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998754
No 23
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=3.8e-37 Score=343.40 Aligned_cols=386 Identities=20% Similarity=0.268 Sum_probs=262.6
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecC
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~ 358 (811)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+.. .+. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HCF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hcc--hhccCC
Confidence 79999976542 589999999 77778899999999 998642211 010 001111
Q ss_pred ccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003552 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT--AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (811)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~--~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t 436 (811)
.-.+++.+.+... .. .++ ...+..+.......+. .....++|+||+|....+..+ +....+.|++++
T Consensus 53 ~~~i~~~~~~~~~--~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 TLPVRVRGDWLPR--SI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred eeEEEEEeEEEcc--hh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 0012222221100 00 000 0011111111111111 112568999999875543332 223334899999
Q ss_pred ecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003552 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (811)
Q Consensus 437 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~ 516 (811)
.|........... .++ ..++... ...+..+++.||.|+++|....+...+.. ....
T Consensus 122 ~h~~~~~~~~~~~-~~~---~~~~~~~-~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQLLAQRGS-LLK---RLYRKPF-DWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHHhcCCCc-HHH---HHHHHHH-HHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 9953221100011 111 1111111 12366789999999999987655221110 0111
Q ss_pred CCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHH
Q 003552 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (811)
Q Consensus 517 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~ 596 (811)
..++.+|+||+|.+.|.|......+ +..+. .+++++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2334599999999888764322100 11122 4677899999999999999999999999
Q ss_pred hhccC---CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChHHHHHHHHccccEEEec
Q 003552 597 NSQLR---ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (811)
Q Consensus 597 l~~~~---~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~-~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~P 672 (811)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++..++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR----VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC----CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98776 79999999998651 22334556788999999 99999999999 7778899999995 9999999
Q ss_pred CCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Q 003552 673 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (811)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e 752 (811)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++.+++++++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999976 8999999996655 8999999999999999999
Q ss_pred hCCHHHHHHHH
Q 003552 753 RYTWKIYSERL 763 (811)
Q Consensus 753 ~yswe~~a~~l 763 (811)
+|||+.+++++
T Consensus 382 ~~s~~~~~~~~ 392 (392)
T cd03805 382 KFSTEAFAERL 392 (392)
T ss_pred hcCHHHHhhhC
Confidence 99999998764
No 24
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1e-36 Score=342.65 Aligned_cols=366 Identities=15% Similarity=0.190 Sum_probs=247.2
Q ss_pred HHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccccccCchhhHHHHH----
Q 003552 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFT---- 393 (811)
Q Consensus 318 ~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~---- 393 (811)
+|+++|+++||+|+ ++|....... .+ ++++++++...... ...++|...+.
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888899999999 9987743211 11 57888877543311 12333332221
Q ss_pred --HHHHHHHHH--HcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCccccCCCC----hhhHhhhhhhhhhhhh
Q 003552 394 --EDVGSEITA--ELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDS----DIYWKKFDEKYHFSCQ 464 (811)
Q Consensus 394 --~~~~~~i~~--~~~~~PDlIh~h~~~~~lva~lla~~-lgvp~v~t~H~l~~~k~~~s----~~~~~~~~~~y~f~~~ 464 (811)
..+.+.+.. ..+.+|||||+|...+. +..+.+. .++|+|..+|.+........ ....... ...+...+
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLD-DALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchh-HHHHHHHh
Confidence 122222222 12568999999976542 2233444 46888876654322111000 0000000 00011111
Q ss_pred hhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHh
Q 003552 465 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 544 (811)
Q Consensus 465 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~ 544 (811)
.......+..||.+|++|....+...+ .+..|+.|||||+|.+.|.|.........
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~------------------------~~~~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPA------------------------ELRSRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcH------------------------hhccceEEeCCCccccccCCCchhhhccc
Confidence 112346799999999999887652110 11468999999999999987643221100
Q ss_pred hhhcchhhhccCccccccccCCCCCCCCCEEEEEec-cCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHH
Q 003552 545 ALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREE 623 (811)
Q Consensus 545 ~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR-L~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~ 623 (811)
...++ .+++++|+|+|| +.+.||++.+++|++++.+..++++|+|+|++...........
T Consensus 203 -----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~ 263 (396)
T cd03818 203 -----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDG 263 (396)
T ss_pred -----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCc
Confidence 11112 457789999998 9999999999999999988889999999998532100000000
Q ss_pred HHHHHHH-HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCccc
Q 003552 624 IAEIEKM-HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 702 (811)
Q Consensus 624 ~~~~~~l-~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~E 702 (811)
..+.+.+ +++..+++ .++|.|+| .++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||..|
T Consensus 264 ~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e 337 (396)
T cd03818 264 ESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVRE 337 (396)
T ss_pred ccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchh
Confidence 0012222 22222222 47899999 7788999999995 9999999999999999999999999999999999999
Q ss_pred ccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003552 703 IIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 764 (811)
Q Consensus 703 iI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll 764 (811)
++.++.+|++++++|+++++++|.+++ +||+.+.+|+++|++++.++|||+.++++++
T Consensus 338 ~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 338 VITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred hcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 999999999999999999999996655 8999999999999999989999999999886
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.2e-36 Score=338.31 Aligned_cols=365 Identities=16% Similarity=0.192 Sum_probs=263.1
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++|..+. +.||.+.++. .|++.|.+.|+++. |++....+ ...... ..
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~----~~~~~~----~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS----AFRKRI----QR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC----hhHHHH----Hh
Confidence 677776554 3599999999 77777888999988 77632111 111111 11
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~-v~t~H 438 (811)
.++.+++++.... ..+ .+...+.+.+.+ .+|||||+|...+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~-----------~~~----~~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG-----------KDV----AVYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC-----------CCh----HHHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2466776654321 011 112234444444 3899999997543 34455666778774 44555
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
+....... ...| .+.+. .+.....+|.+|++|....+...+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43211110 1111 11111 2334557899999998765522111 1222 6
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.+||||+|.+.|.|......... ..... ..++++|+++||+.+.||++.+++|+.++.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPIL-----------------PPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhh-----------------HhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 78999999999998876532211100 00111 356789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCC
Q 003552 599 QLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (811)
Q Consensus 599 ~~~~----~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~ 674 (811)
+..+ +++|+++|+|+. .+.+++.++++++.+++.|+|.+ .++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 789999999876 56788999999999999999942 467888885 999999999
Q ss_pred CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
Q 003552 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 754 (811)
Q Consensus 675 ~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~y 754 (811)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.+++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999996654 799999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 003552 755 TWKIYSERLMTLAGV 769 (811)
Q Consensus 755 swe~~a~~ll~Ly~~ 769 (811)
||+.++++++++|+.
T Consensus 358 s~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 358 SINAMVAAYAGLYDQ 372 (374)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999974
No 26
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=5.5e-37 Score=338.02 Aligned_cols=281 Identities=19% Similarity=0.295 Sum_probs=231.1
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 406 ~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
.+||+||+|....+..+..++++.|+|++++.|+.......... .... +... ...+...++.+|.|+++|...
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~----~~~~-~~~~--~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL----LRSR-WALY--ARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh----cccc-hhHH--HHHHHHHHHhcCEEEECCHHH
Confidence 48999999987777888888899999999999975432211110 0000 1111 112445788999999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccC
Q 003552 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (811)
.+... ..|++ ..++.++|||+|.+.|.|...
T Consensus 154 ~~~~~--------------------~~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLL--------------------ALGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHH--------------------HcCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 65211 11333 678999999999887765311
Q ss_pred CCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003552 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (811)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (811)
..+++.++++|++.+.||++.+++|+..+.+..++++|+|+|+|+. .++++++++++++.++|+|
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEEE
Confidence 2456789999999999999999999999988788999999998865 5678889999999999999
Q ss_pred eccccCcCChHHHHHHHHccccEEEecCC------CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHH
Q 003552 646 IAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (811)
Q Consensus 646 lG~~~~~v~~~el~~~ia~aadvfV~PS~------~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e 719 (811)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|++++++|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 7788999999995 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 720 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
+++++|.+++ +|++.+++++.++++++.++|||+.+++++.++
T Consensus 325 ~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~i 367 (367)
T cd05844 325 ALAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQTAKLEAL 367 (367)
T ss_pred HHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 9999996655 899999999999999999999999999998763
No 27
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=3.3e-36 Score=356.61 Aligned_cols=458 Identities=13% Similarity=0.166 Sum_probs=295.5
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCchh-------HHHHhhhccCccCCCCcHHHHHHHHHHHHHhhcCCCcchHHHHhcC
Q 003552 202 SISRLQSSLSKAEDHLSKLPPDTPFSQ-------FEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR 274 (811)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~gwg~~~~r~~~~~~~~~~~~~~p~~~~le~f~~~ 274 (811)
..++=..++++|.+..+.=. .-|.+ ....+|.+|=|.---++.-|+.-+-+++...-+-- +...+ .
T Consensus 203 ~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~ 275 (694)
T PRK15179 203 ALWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRRR-NAEYD----A 275 (694)
T ss_pred CHHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhcC-ccccc----C
Confidence 34455556666665554432 12222 22356777877666667778887778777654321 11111 1
Q ss_pred CC-Ccc-eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCC------------ceeeceeEEecc
Q 003552 275 LP-MVF-NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGL------------DISPKILIVTRL 340 (811)
Q Consensus 275 ~p-m~~-rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~Gh------------eV~~~ilVvT~~ 340 (811)
.| .+. ||+++..... .||.+.+++ .|+..|.+.|. ++. |++++..
T Consensus 276 ~~~~~~~rIl~vi~sl~-----------~GGAEr~~~--------~La~~l~~~~~~~~~~~g~g~~~~~~--V~~~~~~ 334 (694)
T PRK15179 276 GPESFVGPVLMINGSLG-----------AGGAERQFV--------NTAVALQSAIQQGQSIAGYGVLGPVQ--VVCRSLR 334 (694)
T ss_pred CCCCCcceEEEEeCCCC-----------CCcHHHHHH--------HHHHHHHhcccCcccccCccCCCCcE--EEEEecc
Confidence 12 234 8999875443 599999999 56666677754 233 2243221
Q ss_pred CCCCCCC-ccccceeeecCccCeEEEEecCccccccc--cccc---ccc-Cchh-hHHHHHHHHHHHHHHHcCCCceEEE
Q 003552 341 IPDAKGT-TCNQRLERVSGTEHTHILRVPFRSEKGIL--RQWI---SRF-DVWP-YLETFTEDVGSEITAELQGFPDFII 412 (811)
Q Consensus 341 ~p~~~~~-~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~--~~~i---sr~-~i~~-~l~~f~~~~~~~i~~~~~~~PDlIh 412 (811)
...+. .+...+. ..++.+..++..+..+.. ..+. .+. ...| ........+.+.+.+ .+|||||
T Consensus 335 --~~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~---~kpDIVH 405 (694)
T PRK15179 335 --SREGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS---SVPSVVH 405 (694)
T ss_pred --cccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH---cCCcEEE
Confidence 11111 1111111 124555555443211100 0000 000 0001 111223334444443 4899999
Q ss_pred EcCCCchHHHHHHHHHcCCcEEE-EecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccc
Q 003552 413 GNYSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKN 491 (811)
Q Consensus 413 ~h~~~~~lva~lla~~lgvp~v~-t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~ 491 (811)
+|.+.+++++.++++..++|+|+ +.|++...... . .|+ ..|.... ..+....++.+|++|....+...
T Consensus 406 ~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~---~~~~~l~----~~l~~~~~~i~Vs~S~~~~~~l~- 474 (694)
T PRK15179 406 IWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYR---VEYDIIY----SELLKMRGVALSSNSQFAAHRYA- 474 (694)
T ss_pred EeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHH---HHHHHHH----HHHHhcCCeEEEeCcHHHHHHHH-
Confidence 99999888899999889999876 56765322111 1 111 1111111 11122234566666655433110
Q ss_pred cccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCC
Q 003552 492 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 571 (811)
Q Consensus 492 ~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~ 571 (811)
...|++ ..|+.|||||||...|.|.......... +....+.+
T Consensus 475 ------------------~~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~~------------------~~~~~~~~ 516 (694)
T PRK15179 475 ------------------DWLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMAQ------------------FDARTSDA 516 (694)
T ss_pred ------------------HHcCCC--hhHEEEECCCcCHHhcCCCchhhHHHHh------------------hccccCCC
Confidence 011333 6799999999999888653322211110 11111345
Q ss_pred CCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003552 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (811)
Q Consensus 572 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (811)
.++|+++||+.+.||++.+++|++++.+..++++|+|+|+|+. .++++++++++++.++|+|+|++.
T Consensus 517 ~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~l~~~lgL~~~V~flG~~~- 583 (694)
T PRK15179 517 RFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVREFAQRLGMGERILFTGLSR- 583 (694)
T ss_pred CeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHHHHHHcCCCCcEEEcCCcc-
Confidence 6789999999999999999999999988889999999999987 678999999999999999999532
Q ss_pred cCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCH--HHHHHHHHHHH
Q 003552 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP--DQAAELMADFF 729 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~--e~lA~aI~~~l 729 (811)
++..+|+. +|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++++|. ++++++|.+++
T Consensus 584 -----dv~~ll~a-aDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll 657 (694)
T PRK15179 584 -----RVGYWLTQ-FNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIH 657 (694)
T ss_pred -----hHHHHHHh-cCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHH
Confidence 57778884 99999999999999999999999999999999999999999999999998874 68999998877
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 730 GKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 730 ~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
..+..++ .+++++++++.++|||+.++++++++|+
T Consensus 658 ~~l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 658 DMCAADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hChhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 5555554 4677899999999999999999999985
No 28
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.2e-35 Score=325.66 Aligned_cols=361 Identities=17% Similarity=0.218 Sum_probs=255.0
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++.+|+| |..||++.++. +|++.|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 69999999886 35799999999 77778899999999 99876332210 1122
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (811)
.++++.++|...... ...+.+ . ...+...+. ...++|+||...... ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~--~-~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY--D-ILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH--H-HHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 357777777543111 000000 0 011111111 134566666555444 34445556679999999998
Q ss_pred CccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003552 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (811)
Q Consensus 440 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~ 519 (811)
...... .|......+ ....+..+++.||.||++|....+..++ .| |. +
T Consensus 118 ~~~~~~-----~~~~~~~~~----~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~----------------~~----~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAKRY----LKFGEKLAVKFADRLIADSPGIKEYLKE---KY----------------GR----D 165 (363)
T ss_pred cceeec-----ccccchhHH----HHHHHHHHHhhccEEEeCCHHHHHHHHH---hc----------------CC----C
Confidence 643221 111111111 1123556788999999999887652211 11 11 2
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhc
Q 003552 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (811)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 599 (811)
+ .+||||+|...+.+.... . ...+. .+++.++++||+.+.||++.+++|++++.+
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~---~------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEI---L------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhh---H------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 899999998876541110 0 11232 234568899999999999999999998854
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCC-CC
Q 003552 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY-EA 677 (811)
Q Consensus 600 ~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~-E~ 677 (811)
+++|+++|+++. ...+.+.+. .+++.++|+|+| .++..++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 678889999999 7778899999995 9999999998 99
Q ss_pred CCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003552 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (811)
Q Consensus 678 fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe 757 (811)
||++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|.. +.+|++.+.++++++++++.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~----l~~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEE----LEADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHH----HHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999966 7999988775 8888854 45899999999999999998899999
Q ss_pred HHHHHHHHHHH
Q 003552 758 IYSERLMTLAG 768 (811)
Q Consensus 758 ~~a~~ll~Ly~ 768 (811)
.++++++++|+
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 29
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1.8e-36 Score=344.96 Aligned_cols=395 Identities=15% Similarity=0.126 Sum_probs=268.7
Q ss_pred CCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccc----
Q 003552 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKG---- 374 (811)
Q Consensus 299 p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~---- 374 (811)
-..||.+..+...|-++.....+.=+-.|+.|..+|-++|+......|.++--..-...+.+...+-+++..-++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (578)
T PRK15490 171 LGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIE 250 (578)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcccc
Confidence 4479999999977776555444444446788888888999997766555443211111344444555555322221
Q ss_pred --cccccccccCchhhHHHHHH-HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE-EecCCccccCCCChh
Q 003552 375 --ILRQWISRFDVWPYLETFTE-DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDI 450 (811)
Q Consensus 375 --~~~~~isr~~i~~~l~~f~~-~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~-t~H~l~~~k~~~s~~ 450 (811)
.++..++. +-|-. .+.. .+...++ ..+|||||+|...+++.+.++++..|+|+++ +.|+..... ...
T Consensus 251 ~~~~~~~~~~--~~~~~-~~~~~~l~~~ir---~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~--~~r- 321 (578)
T PRK15490 251 SPELRLLLSH--LPPVC-KYGIKHLVPHLC---ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV--RKR- 321 (578)
T ss_pred chHHHHHHhc--CChHH-HHHHHHHHHHHH---HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc--hhh-
Confidence 11111111 00111 1111 2222333 4599999999988888899999999999965 466521100 000
Q ss_pred hHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCC
Q 003552 451 YWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM 530 (811)
Q Consensus 451 ~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~ 530 (811)
.....+....+ .......+| +++.|....+. + ....|+ ++.|+.+||||+|.
T Consensus 322 ---~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~-------l------------~~~lgi--p~~KI~VIyNGVD~ 373 (578)
T PRK15490 322 ---LFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRH-------Y------------ADWLKL--EAKHFQVVYNGVLP 373 (578)
T ss_pred ---HHHHHHHHhhh---hceeEecch-hhhccHHHHHH-------H------------HHHhCC--CHHHEEEEeCCcch
Confidence 01111110000 001122233 34444433221 1 111133 37899999999999
Q ss_pred CCCCCCchHHHH-HhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEE
Q 003552 531 DIYFPYSEKQKR-LTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV 609 (811)
Q Consensus 531 ~~f~p~~~~~~r-~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIV 609 (811)
..|.|....... ... ...++ +++.++|+++||+.+.||...+++++.++.+..++++|+|+
T Consensus 374 ~rf~p~~~~~~~~r~~----------------~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIV 435 (578)
T PRK15490 374 PSTEPSSEVPHKIWQQ----------------FTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLV 435 (578)
T ss_pred hhcCccchhhHHHHHH----------------hhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEE
Confidence 988875422110 000 01222 34567899999999999999999999988877789999999
Q ss_pred eCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcC
Q 003552 610 AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG 689 (811)
Q Consensus 610 G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~G 689 (811)
|+|+. .++++++++++++.++|+|+|+ ..++..+|+. +|+||+||.+|+||++++|||+||
T Consensus 436 GdG~~------------~eeLk~la~elgL~d~V~FlG~------~~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~G 496 (578)
T PRK15490 436 GDGDL------------RAEAQKRAEQLGILERILFVGA------SRDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVG 496 (578)
T ss_pred eCchh------------HHHHHHHHHHcCCCCcEEECCC------hhhHHHHHHh-CCEEEEcccccCccHHHHHHHHhC
Confidence 99977 6789999999999999999994 2467888885 999999999999999999999999
Q ss_pred CCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 690 LPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 690 lPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
+|||+|+.||..|+|.+|.+|++++++|++++++++..+ ..+..+.+.+..|+++|++++.++|||+.++++|+++|.
T Consensus 497 lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 497 VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988876432 334455556678999999999999999999999999986
No 30
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=1.8e-35 Score=329.55 Aligned_cols=287 Identities=20% Similarity=0.207 Sum_probs=213.6
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHH
Q 003552 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (811)
..+|||||+|++....+ ..+++..++|++.+.|+..... ....|+ + ....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVWD-------F------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHHH-------H------HHHHHHhCCEEeecHHH
Confidence 45899999998775333 2223334899999999743211 111111 1 12356789999988843
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCC--CCchHHHHHhhhhcchhhhccCcccccc
Q 003552 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF--PYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (811)
Q Consensus 485 ~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~--p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (811)
... .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 221 1222 3455 999999975322 22221111 0112
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (811)
.+|+ ++++++|+++||+++.||++.+++|++.+.+..++++|+|+|+|+.. +++. .+.++++.+..++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~----~~~~---~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD----DPEG---WIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC----Cchh---HHHHHHHHHHhCCCCC
Confidence 3555 56889999999999999999999999999887789999999998651 1111 2234455556788889
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHH
Q 003552 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 722 (811)
Q Consensus 643 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA 722 (811)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..++|.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998421 36788888888 59999999999999999999999999999999999999999999999987 467788
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 723 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
++|.+++ +|++.+++|+++|++.+.++|||+.++++++++|+.
T Consensus 329 ~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 329 VRILYLL----RDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 8885544 899999999999999999999999999999999874
No 31
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=6.7e-35 Score=316.19 Aligned_cols=372 Identities=18% Similarity=0.222 Sum_probs=262.9
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|.......... ...
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~------~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLLV------ALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccchh------hcc--
Confidence 6889987664 46799999999 77778899999999 8876532211100 000
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~--~lva~lla~~lgvp~v~t~ 437 (811)
+......... . ..... ... ..+.... .........+||+||+|.... ...+...+++.++|++++.
T Consensus 52 -~~~~~~~~~~-~-~~~~~-----~~~---~~~~~~~-~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSIN-V-AYGLN-----LAR---YLFPPSL-LAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccc-h-hhhhh-----hhh---hccChhH-HHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 0000000000 0 00000 000 0000111 111122256899999987433 4556667778899999999
Q ss_pred cCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003552 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (811)
Q Consensus 438 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~ 517 (811)
|+........ ...++. ....+......++.++.++++|........ .+ .+
T Consensus 120 ~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~---------------------~~--~~ 169 (375)
T cd03821 120 HGMLDPWALP-HKALKK------RLAWFLFERRLLQAAAAVHATSEQEAAEIR---------------------RL--GL 169 (375)
T ss_pred cccccccccc-cchhhh------HHHHHHHHHHHHhcCCEEEECCHHHHHHHH---------------------hh--CC
Confidence 9864322110 001111 111122345678899999999866544111 11 12
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHh
Q 003552 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (811)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l 597 (811)
..++.++|||+|.+.+.+......+ ...+. +.++++|+++||+.+.||++.+++|+.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 6789999999999888765432211 11233 56788999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCC
Q 003552 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (811)
Q Consensus 598 ~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 677 (811)
.+.+++++|+++|.+.. .+...++.+++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 229 ~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~ 293 (375)
T cd03821 229 AERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSEN 293 (375)
T ss_pred hhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCC
Confidence 88888999999998765 22445566678999999999999 6777899999996 999999999999
Q ss_pred CCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003552 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (811)
Q Consensus 678 fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe 757 (811)
||++++|||+||+|||+|+.||..+++.+ .+|+++++ +.++++++|.+++ +|++.++++++++++.+.++|||+
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999988 78998865 5599999995554 899999999999999999999999
Q ss_pred HHHHHHH
Q 003552 758 IYSERLM 764 (811)
Q Consensus 758 ~~a~~ll 764 (811)
.++++++
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 9999886
No 32
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=319.02 Aligned_cols=363 Identities=17% Similarity=0.221 Sum_probs=278.5
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecC
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~ 358 (811)
++|++||+|.| |.+||.+.++. .|++.|-+.||.|. |+|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 57999999999 55899999999 88999999999998 999998776544322
Q ss_pred ccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchH--HHHHHHHHcCCcEEEE
Q 003552 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL--VASLLAYKMGITQCTI 436 (811)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~l--va~lla~~lgvp~v~t 436 (811)
+.+.+++.+|+... .+...+|-+...+.-+...+. +++..|||+|.+.+.+ -+...++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~l---rE~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILL---RERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhh---hhceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 23578888877542 112222222111111122223 3489999999987643 4567788899999999
Q ss_pred ecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003552 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (811)
Q Consensus 437 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~ 516 (811)
-|++.-- .++.-..... .+ ..++...|.+||+|..-+++ -.+...++
T Consensus 121 dHSlfGf----ad~~si~~n~----ll-----~~sL~~id~~IcVshtsken-------------------tvlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGF----ADIGSILTNK----LL-----PLSLANIDRIICVSHTSKEN-------------------TVLRGALA- 167 (426)
T ss_pred ccccccc----cchhhhhhcc----ee-----eeeecCCCcEEEEeecCCCc-------------------eEEEeccC-
Confidence 9986332 1211111111 11 23677899999999764332 11223344
Q ss_pred CCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHH
Q 003552 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (811)
Q Consensus 517 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~ 596 (811)
+.|+.+|||.++...|.|...+. ...+...|+.++||..+||+|.|++++++
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~---------------------------~S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADK---------------------------PSADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCcccc---------------------------CCCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 78999999999999999954321 02344689999999999999999999999
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCC
Q 003552 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (811)
Q Consensus 597 l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E 676 (811)
+.+.+|+++++|+|+||. ...+++..+++.++++|.++| .++.+++.+.+.+ .|+|+.||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999998 667888999999999999999 8889999999996 99999999999
Q ss_pred CCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003552 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 756 (811)
Q Consensus 677 ~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~ysw 756 (811)
+||++++|||+||+|||+|++||.+|++.++ -.......++++++++.+++.++.+.|.. -.+++.+-|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~~-------~h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPLE-------FHDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCchh-------HHHHHHHhccH
Confidence 9999999999999999999999999999765 23345557999999999999887777543 35567788999
Q ss_pred HHHHHHHHHHHH
Q 003552 757 KIYSERLMTLAG 768 (811)
Q Consensus 757 e~~a~~ll~Ly~ 768 (811)
+.++++.+++|.
T Consensus 354 ~dVa~rTekvy~ 365 (426)
T KOG1111|consen 354 KDVAERTEKVYD 365 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999999999964
No 33
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=2.5e-35 Score=322.60 Aligned_cols=347 Identities=19% Similarity=0.229 Sum_probs=259.4
Q ss_pred CcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCcccccccccc
Q 003552 300 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 379 (811)
Q Consensus 300 ~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~ 379 (811)
+.||.++++. +|+++|+++||+|. +++...+.. ... ...++.++++++...+
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~----~~~~~~~~~~~~~~~~------ 59 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AEL----EAEGSRHIKLPFISKN------ 59 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHH----HhcCCeEEEccccccc------
Confidence 3599999999 77778899999998 887542111 111 1123556666554321
Q ss_pred ccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhh
Q 003552 380 ISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459 (811)
Q Consensus 380 isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y 459 (811)
.+..+ .+...+.+.+. ..+||+||+|+....+.+.++++..++|++.+.|+...... .
T Consensus 60 -----~~~~~-~~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------------~- 117 (355)
T cd03819 60 -----PLRIL-LNVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF------------R- 117 (355)
T ss_pred -----hhhhH-HHHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH------------H-
Confidence 11111 12223333333 35899999999877788888888899999999998643210 0
Q ss_pred hhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchH
Q 003552 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (811)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~ 539 (811)
....+..+|.++++|....+..+ ...|++ ..++.+||||+|...|.+....
T Consensus 118 --------~~~~~~~~~~vi~~s~~~~~~~~-------------------~~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 118 --------YNAIMARGDRVIAVSNFIADHIR-------------------ENYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred --------HHHHHHhcCEEEEeCHHHHHHHH-------------------HhcCCC--hhhEEEecCCccccccCccccc
Confidence 11346789999999987655221 112332 6799999999999888664322
Q ss_pred HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCc
Q 003552 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (811)
Q Consensus 540 ~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~ 619 (811)
...... .++.++. ++++++++++||+.+.||++.+++++.++.+..++++|+|+|+++.
T Consensus 169 ~~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----- 227 (355)
T cd03819 169 PERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----- 227 (355)
T ss_pred hHHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc-----
Confidence 111100 1122333 5677899999999999999999999999988778999999999865
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecC-CCCCCCHHHHHHHHcCCCEEEcCCC
Q 003552 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHG 698 (811)
Q Consensus 620 d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS-~~E~fGltvlEAMa~GlPVIAT~~G 698 (811)
.....+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 228 ---RRFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ---cchHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 11334556678888999999999994 4578889995 99999999 8999999999999999999999999
Q ss_pred CcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003552 699 GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 759 (811)
Q Consensus 699 G~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~ 759 (811)
|..|++.++.+|++++++|+++++++|...+ ..+++.+++++++|++.+.++|||+.+
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 9999999999999999999999999996544 358999999999999999999999863
No 34
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=4.4e-34 Score=311.89 Aligned_cols=272 Identities=21% Similarity=0.302 Sum_probs=224.4
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCH
Q 003552 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (811)
Q Consensus 405 ~~~PDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (811)
..+||+||+|+... ..++.+.++..++|++++.|+......... ......++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA-----------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch-----------------HHHHHHHhhCCEEEECCH
Confidence 45899999998754 445555555668999999997532111000 123456889999999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccc
Q 003552 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (811)
Q Consensus 484 ~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 563 (811)
...+..++. .|.. ..++.++|||+|.+.+.+...
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~------------------------- 173 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPP------------------------- 173 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCccc-------------------------
Confidence 876632211 1222 678999999999887755320
Q ss_pred cCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003552 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (811)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 643 (811)
. ...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. ...+.+.++++++.++|
T Consensus 174 -~--~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 174 -P--PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred -c--ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 0 03466789999999999999999999999988778999999999977 56788889999999999
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEecCCC------CCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCC
Q 003552 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH 717 (811)
Q Consensus 644 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~------E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D 717 (811)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|+|+|+.|+..+++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 7778899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003552 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 763 (811)
Q Consensus 718 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~l 763 (811)
.++++++|.+++ +|++.+.+++++|++++.++|||+..++++
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 999999996655 799999999999999999999999998763
No 35
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=7.2e-34 Score=309.12 Aligned_cols=387 Identities=18% Similarity=0.261 Sum_probs=273.6
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++.+.+ |..||...++. .+++.|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6899997765 33489999999 77778899999999 8876533222111100 011122
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~--~lva~lla~~lgvp~v~t~ 437 (811)
.++++.+++...... ..+..+ ++.+ ..|.......+.. ...+||+||++.+.. ...+..+++..++|+++++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 356777776544321 000000 1111 1222233333321 256899999998432 4555666677799999999
Q ss_pred cCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003552 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (811)
Q Consensus 438 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~ 517 (811)
|+.+............ ....+.+.. ..+...++.+|.++++|....+... ..++.
T Consensus 132 h~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKN-GSLLYRLLR--KLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCccc-cchHHHHHH--HHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 9875432111100000 000001111 2355678999999999988765211 11222
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHh
Q 003552 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (811)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l 597 (811)
..++.++|||+|...+.+......+ ..... ..+++.|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877665432211 01111 45678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCC
Q 003552 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (811)
Q Consensus 598 ~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 677 (811)
.+. ++++|+++|+++. .+.+.+.+...++ ++|.|+| .++.+++..+++. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 7899999999877 5566666666666 5799999 7778899999995 999999999887
Q ss_pred C-----CHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Q 003552 678 F-----GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (811)
Q Consensus 678 f-----GltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e 752 (811)
+ |++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+++ .|++.++++++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 5 888999999999999999999999999989999999999999999996655 8999999999999999988
Q ss_pred hCCHHHHHHHHH
Q 003552 753 RYTWKIYSERLM 764 (811)
Q Consensus 753 ~yswe~~a~~ll 764 (811)
+|||+.++++++
T Consensus 383 ~~s~~~~~~~~~ 394 (394)
T cd03794 383 KFSREKLAERLL 394 (394)
T ss_pred hhcHHHHHHhcC
Confidence 999999998863
No 36
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=6.1e-34 Score=309.11 Aligned_cols=333 Identities=15% Similarity=0.162 Sum_probs=240.2
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecC
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~ 358 (811)
|||++|++..+|- +.|..||.++++. +|++.|.++||+|. +++........ ..
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 7999999876541 3467899999999 77777899999999 88865322110 00
Q ss_pred ccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003552 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H 438 (811)
......+.. ................+.+.+. ..+|||||+|.+..... +++..++|+|.+.|
T Consensus 54 ---~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLR---------LDAPGRDRAEAEALALAERALA---AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCcc---------cccchhhHhhHHHHHHHHHHHh---cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 011110000 0000000011122222222222 45899999999877655 56788999999999
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
+....... + .......++.++++|....... .. .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~~------------------------~~--~ 149 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRPW------------------------PP--L 149 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhhc------------------------cc--c
Confidence 86432210 0 1134567788899887764410 01 1
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.+||||+|.+.|.+. ..+++.|+++||+.+.||++.+++++.+.
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~~- 196 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARRA- 196 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHhc-
Confidence 578899999999877551 23566899999999999999999998653
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEEEeccccCcCChHHHHHHHHccccEEEecCC-CC
Q 003552 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YE 676 (811)
Q Consensus 599 ~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~-L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~-~E 676 (811)
+++|+|+|++.. ...+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 197 ----~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 197 ----GIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ----CCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 689999999976 333444444443 568999999 6777899999995 999999997 59
Q ss_pred CCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003552 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 756 (811)
Q Consensus 677 ~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~ysw 756 (811)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999996543 332 24678888899999
Q ss_pred HHHHHHHHHHHH
Q 003552 757 KIYSERLMTLAG 768 (811)
Q Consensus 757 e~~a~~ll~Ly~ 768 (811)
+.++++|+++|+
T Consensus 324 ~~~~~~~~~~y~ 335 (335)
T cd03802 324 ARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhC
Confidence 999999999984
No 37
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=1.4e-33 Score=302.72 Aligned_cols=373 Identities=22% Similarity=0.341 Sum_probs=273.7
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||+++++... |..||...++. .|++.|.+.||+|. +++............ ..
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~~~------~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEEEV------GG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCceeee------cC-
Confidence 6899987654 23589999999 77778888999999 887764332211000 00
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (811)
......+.. ...........+.....+.+. ..+||+||++.+.........++..++|++++.|+
T Consensus 53 --~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPL----------LRVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCcc----------cccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 000000000 000011111122222333333 34899999999887665557788889999999999
Q ss_pred CccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003552 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (811)
Q Consensus 440 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~ 519 (811)
......... . .. ............++.+|.+++.|....+...+. .+.. ..
T Consensus 118 ~~~~~~~~~---~-~~----~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE---L-GL----LLKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc---h-hH----HHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 765432211 0 00 000111234567889999999998775522111 1111 35
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhc
Q 003552 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (811)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 599 (811)
++.++|||+|...+.+.. ...+ ..... ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876643 1110 00111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCC
Q 003552 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (811)
Q Consensus 600 ~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG 679 (811)
..++++|+++|++.. ...+++.+++++..++|.|+| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997765 677788888899999999999 6777899999996 99999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003552 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 759 (811)
Q Consensus 680 ltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~ 759 (811)
++++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+++ +|++.++++++++++.+.+.|||+.+
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999999999996654 89999999999999999999999999
Q ss_pred HHHHHHHH
Q 003552 760 SERLMTLA 767 (811)
Q Consensus 760 a~~ll~Ly 767 (811)
++++.++|
T Consensus 366 ~~~~~~~~ 373 (374)
T cd03801 366 AARTEEVY 373 (374)
T ss_pred HHHHHHhh
Confidence 99999886
No 38
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9e-34 Score=308.20 Aligned_cols=363 Identities=19% Similarity=0.267 Sum_probs=261.1
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++.... |..||.+.++. .|+++|+++||+|+ ++|......... . .
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~-~------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--P-A------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--C-C-------
Confidence 6899987664 44689999999 77888899999999 888764321110 0 0
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~-~lva~lla~~lgvp~v~t~H 438 (811)
....+...+...... . ++... ....+.+.+. ..+||+||++.... ++.+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~-----~-~~~~~-----~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPE-----I-RLALP-----PRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccc-----e-Eeccc-----chhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 112222222111100 0 00000 0111222222 34899999886554 46677778889999999999
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
+......... ...... .+. ........+.+|.+++.|....+. + ...+ .
T Consensus 116 ~~~~~~~~~~--~~~~~~---~~~--~~~~~~~~~~~d~i~~~s~~~~~~-------~---------------~~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY--GLGPLS---WLA--WAYLRWFHNRADRVLVPSPSLADE-------L---------------RARG--F 164 (364)
T ss_pred cChHHHhhhc--ccchHh---Hhh--HHHHHHHHHhCCEEEeCCHHHHHH-------H---------------hccC--C
Confidence 7543111000 000000 000 112345678999999999886541 0 0111 4
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.+++||+|.+.|.|........ ..++ +.+++.++++||+.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 5788999999999887654322211 1122 346788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCC
Q 003552 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (811)
Q Consensus 599 ~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 678 (811)
+. ++++|+|+|+++. ...++ +..++|.|+| .++.+++..+++. +|+++.||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 77 8899999999876 22222 4567899999 6778999999995 9999999999999
Q ss_pred CHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003552 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 758 (811)
Q Consensus 679 GltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~ 758 (811)
|++++|||+||+|||+++.|+..|+++++.+|++++++|.++++++|.+++ +||+.++++++++++.+ ++|||+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 999999999999999999999999999999999999999999999996654 89999999999999998 8899999
Q ss_pred HHHHHHHHHH
Q 003552 759 YSERLMTLAG 768 (811)
Q Consensus 759 ~a~~ll~Ly~ 768 (811)
++++++++|+
T Consensus 355 ~~~~~~~~~~ 364 (364)
T cd03814 355 FLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhC
Confidence 9999999873
No 39
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9.8e-34 Score=309.40 Aligned_cols=354 Identities=19% Similarity=0.243 Sum_probs=256.9
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||+++++..+ |+.||.+.++. +|++.|.++||+|+ |++......... .. .
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~---~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------EE---R 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------hh---c
Confidence 6899987665 45799999999 77888899999999 887653322111 11 1
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (811)
.+..+.+.+.... ....+.... ....+. ....+||+||+|+..............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLN----------VASTPFSPS----FFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccc----------cccccccHH----HHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 1234555443211 001111111 111111 2256899999998765333333333468899999996
Q ss_pred CccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003552 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (811)
Q Consensus 440 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~ 519 (811)
..... .. ....+. ..+...++.||.|+++|....+.... +..+..
T Consensus 116 ~~~~~----~~----~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQ----KL----LLKLYR-----PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhcc----ch----hhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 32211 00 111111 12345788999999999876542110 011146
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhc
Q 003552 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (811)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 599 (811)
++.+||||+|.+.+.+....... .... ..+++.|+++||+.+.||++.+++|+.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEEA--------------------IWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhhH--------------------hhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 88999999999887664322110 0111 456789999999999999999999999885
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCC--CCC
Q 003552 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEA 677 (811)
Q Consensus 600 ~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~ 677 (811)
+++|+|+|+|+. ...+.+.++++++.++|.|+| .++..++..+++. +|++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 799999999876 567888888999999999999 7778899999995 999999996 599
Q ss_pred CCHHHHHHHHcCCCEEEcCCCCccccccc-CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003552 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEH-GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 756 (811)
Q Consensus 678 fGltvlEAMa~GlPVIAT~~GG~~EiI~d-g~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~ysw 756 (811)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999998886 89999999999999999996655 89999999999999999999999
Q ss_pred HHHH
Q 003552 757 KIYS 760 (811)
Q Consensus 757 e~~a 760 (811)
+.++
T Consensus 354 ~~~~ 357 (357)
T cd03795 354 DRMV 357 (357)
T ss_pred HhhC
Confidence 9864
No 40
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=8.3e-35 Score=335.59 Aligned_cols=293 Identities=19% Similarity=0.263 Sum_probs=232.6
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCccccCC--CChhhHh--hhhhh-hhhhhhhhHHHHHHhhCCEE
Q 003552 405 QGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYP--DSDIYWK--KFDEK-YHFSCQFTADLIAMNNADFI 478 (811)
Q Consensus 405 ~~~PDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~--~s~~~~~--~~~~~-y~f~~~~~~e~~a~~~AD~I 478 (811)
..++||||+|... .++.+.+++++.|+|+|+|.|+....... .....|. .+... .++.. ..+..+++.||.|
T Consensus 171 ~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~ad~I 248 (475)
T cd03813 171 LPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFE--SLGRLAYQAADRI 248 (475)
T ss_pred CCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHH--HHHHHHHHhCCEE
Confidence 4589999999753 46788888999999999999986321100 0000000 00000 01111 2356788999999
Q ss_pred EecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcc
Q 003552 479 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558 (811)
Q Consensus 479 It~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~ 558 (811)
+++|....+. ....|++ .+|+.+||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~--------------------~~~~g~~--~~ki~vIpNgid~~~f~~~~~~------------------- 287 (475)
T cd03813 249 TTLYEGNRER--------------------QIEDGAD--PEKIRVIPNGIDPERFAPARRA------------------- 287 (475)
T ss_pred EecCHHHHHH--------------------HHHcCCC--HHHeEEeCCCcCHHHcCCcccc-------------------
Confidence 9999876441 1112333 6799999999999888764321
Q ss_pred ccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003552 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (811)
Q Consensus 559 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 638 (811)
+ .+.++++|+++||+.+.||++.+++|++.+.+..++++|+|+|+++. ...+.+++++++++++
T Consensus 288 ------~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~ 351 (475)
T cd03813 288 ------R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLG 351 (475)
T ss_pred ------c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhC
Confidence 0 13567899999999999999999999999988889999999999854 1245678889999999
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCccccccc------CCcEEE
Q 003552 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH------GASGFH 712 (811)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~d------g~~G~l 712 (811)
+.++|+|+| . .++..+++. +|++|+||..|+||++++|||+||+|||+|+.||..|++.+ |.+|++
T Consensus 352 l~~~V~f~G----~---~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 352 LEDNVKFTG----F---QNVKEYLPK-LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCeEEEcC----C---ccHHHHHHh-CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 999999999 2 356777774 99999999999999999999999999999999999999988 679999
Q ss_pred ECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 713 i~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
++++|+++++++|.+++ +|++.+++++++|++++.+.|||+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999996654 89999999999999999999999999999999984
No 41
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=2.2e-33 Score=304.80 Aligned_cols=372 Identities=19% Similarity=0.277 Sum_probs=264.8
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++...+ |..||...++. .|+++|.++||+|. ++|...+...... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~------~~--- 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE------EV--- 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc------cc---
Confidence 6889987654 56799999999 78888899999999 8887644322110 00
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~-~lva~lla~~lgvp~v~t~H 438 (811)
......+.+... ..+.... ..+...+...+. ..+||+||+|.... +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFK--------YPDFRLP---LPIPRALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccch--------hhhhhcc---ccHHHHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 011111111110 0011110 011111222122 45899999987643 55677788889999999999
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
+....... ........... ......+...++.||.+++.|....+..+ ++ +. .
T Consensus 117 ~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~d~i~~~s~~~~~~~~----~~----------------~~---~ 169 (374)
T cd03817 117 TMYEDYTH-YVPLGRLLARA---VVRRKLSRRFYNRCDAVIAPSEKIADLLR----EY----------------GV---K 169 (374)
T ss_pred CCHHHHHH-HHhcccchhHH---HHHHHHHHHHhhhCCEEEeccHHHHHHHH----hc----------------CC---C
Confidence 86431100 00000000000 00002355678899999999987554211 11 22 3
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.++|||+|...+.+......+ ..++. +.+++.|+++|++.+.||++.+++++.++.
T Consensus 170 ~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~ 228 (374)
T cd03817 170 RPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARLL 228 (374)
T ss_pred CceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHHH
Confidence 468999999999888765433221 11333 456789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCC
Q 003552 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (811)
Q Consensus 599 ~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 678 (811)
+..++++|+++|+++. .+.++++++++++.++|.|+| .++.+++..+++. +|++++|+..|++
T Consensus 229 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~~ 291 (374)
T cd03817 229 KEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTETQ 291 (374)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccCc
Confidence 7778999999999876 567888899999999999999 6778899999996 9999999999999
Q ss_pred CHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003552 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 758 (811)
Q Consensus 679 GltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~ 758 (811)
|++++|||+||+|||+++.|+..|++.++.+|+++++.|. +++++|.+ +.+|++.+++|++++++.+.+.+
T Consensus 292 ~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~---- 362 (374)
T cd03817 292 GLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLR----LLQDPELRRRLSKNAEESAEKFS---- 362 (374)
T ss_pred ChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHH----HHhChHHHHHHHHHHHHHHHHHH----
Confidence 9999999999999999999999999999999999998887 88888855 45899999999999999995444
Q ss_pred HHHHHHHHHHH
Q 003552 759 YSERLMTLAGV 769 (811)
Q Consensus 759 ~a~~ll~Ly~~ 769 (811)
.++++.++|+.
T Consensus 363 ~~~~~~~~~~~ 373 (374)
T cd03817 363 FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHhc
Confidence 66777777653
No 42
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=1.1e-33 Score=305.50 Aligned_cols=363 Identities=17% Similarity=0.181 Sum_probs=265.5
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||+++.+-.. .||.+.++. .|++.|++.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5777765443 389999999 77778889999998 7765422111 11111 1
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEec
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAH 438 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~-lgvp~v~t~H 438 (811)
.++.+..++.... ...+ .+...+.+.+. +.+||+||++.......+...++. .++|++.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~----~~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDP----GALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccH----HHHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2455555544321 0111 12223333333 348999999987776766666666 6889999999
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
....... .|. ...+. .........+|.+++.|....+... ..|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~~~-----~~~~~~~~~~~~~i~~s~~~~~~~~--------------------~~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRLVA-----RLRRLLSSFIPLIVANSAAAAEYHQ--------------------AIGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhHHH-----HHHHHhccccCeEEeccHHHHHHHH--------------------HcCCC--h
Confidence 8654321 011 11111 1233456788999999987655211 01333 6
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.++|||+|...|.+........ ++.+++ +++++.|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 7899999999998876654322211 123455 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCC
Q 003552 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (811)
Q Consensus 599 ~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 677 (811)
+..++++|+++|.+.. ......... ++++.++|.|+|.+ +++..+++. +|++++||.+|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999876 334444554 78899999999832 457788885 999999999999
Q ss_pred CCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003552 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (811)
Q Consensus 678 fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe 757 (811)
||++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++++.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999996655 799999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003552 758 IYSERLMTLAG 768 (811)
Q Consensus 758 ~~a~~ll~Ly~ 768 (811)
..++++.++|+
T Consensus 355 ~~~~~~~~~y~ 365 (365)
T cd03807 355 AMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 43
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=4.4e-33 Score=303.53 Aligned_cols=358 Identities=16% Similarity=0.176 Sum_probs=251.8
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++|++.. |..||.+.++. .|++.|.+.||+|. +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998643 34799999999 77778899999998 776543221110000 00
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc---hHHH---HHHHHHcCCcE
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG---NLVA---SLLAYKMGITQ 433 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~---~lva---~lla~~lgvp~ 433 (811)
....... ..... ....+.+.+. ..+||+||++.+.+ ...+ ....+..++|+
T Consensus 52 ~~~~~~~---------------~~~~~-----~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV---------------LDNPL-----DYRRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee---------------cCCch-----hHHHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 00111 0112222333 34899999887432 2222 22234589999
Q ss_pred EEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003552 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (811)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~G 513 (811)
+.++|+..... ...+ ........++.+|.|++.|..... + + +
T Consensus 109 i~~~h~~~~~~----~~~~-----------~~~~~~~~~~~~d~ii~~s~~~~~---~----~-----------~----- 150 (366)
T cd03822 109 VVTLHTVLLHE----PRPG-----------DRALLRLLLRRADAVIVMSSELLR---A----L-----------L----- 150 (366)
T ss_pred EEEEecCCccc----cchh-----------hhHHHHHHHhcCCEEEEeeHHHHH---H----H-----------H-----
Confidence 99999861100 0000 001234568899999999733322 1 1 0
Q ss_pred CCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHH
Q 003552 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (811)
Q Consensus 514 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA 593 (811)
......++.+||||+|...+.+...... .+. ..++++|+++||+.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------------------~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLKA----------------------LGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhHh----------------------hcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0101468999999999877655432110 111 4567899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecC
Q 003552 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (811)
Q Consensus 594 ~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS 673 (811)
+.++.+..++++|+|+|++..... .......++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~-------~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE-------RYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh-------hhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 999988888999999999865100 001111145788899999999981 3778999999996 99999999
Q ss_pred CCC--CCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003552 674 FYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (811)
Q Consensus 674 ~~E--~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 751 (811)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|.++++++|.+++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77777888999999999999999996554 899999999999999996
Q ss_pred HhCCHHHHHHHHHHHHH
Q 003552 752 ERYTWKIYSERLMTLAG 768 (811)
Q Consensus 752 e~yswe~~a~~ll~Ly~ 768 (811)
+ |||+.+++++.++|+
T Consensus 351 ~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A-MSWERVAERYLRLLA 366 (366)
T ss_pred h-CCHHHHHHHHHHHhC
Confidence 6 999999999999873
No 44
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=3.5e-33 Score=305.43 Aligned_cols=358 Identities=17% Similarity=0.243 Sum_probs=254.6
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++++. ..||.+.++. .|++.|+++||+|+ |++...... ... ...
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-~~~-------~~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGESE-VKP-------PID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCCC-ccc-------hhh-
Confidence 577776543 2599999999 77788899999999 887542111 000 000
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEec
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAH 438 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H 438 (811)
...+..++... ..+.++.. ...+.+.+. ..+||+||+|...+++++.+++... ++|++.+.|
T Consensus 49 -~~~~~~~~~~~------------~~~~~~~~-~~~~~~~~~---~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSK------------NPLSFLLA-LWKLRKILR---QFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEecccc------------cchhhHHH-HHHHHHHHH---hcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 01111222211 01111111 112222232 3489999999887776666655543 678999999
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
+..... .. ..+. .......++.++++|....+.. ....+++ .
T Consensus 112 ~~~~~~------~~------~~~~-----~~~~~~~~~~~~~~s~~~~~~~-------------------~~~~~~~--~ 153 (360)
T cd04951 112 SKNEGG------RL------RMLA-----YRLTDFLSDLTTNVSKEALDYF-------------------IASKAFN--A 153 (360)
T ss_pred ccCchh------HH------HHHH-----HHHHhhccCceEEEcHHHHHHH-------------------HhccCCC--c
Confidence 764211 00 0111 1123345777777776654411 1111222 6
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.+||||+|...|.+........ ++.++. ++++++++++||+.+.||++.+++++.++.
T Consensus 154 ~~~~~i~ng~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 154 NKSFVVYNGIDTDRFRKDPARRLKI-----------------RNALGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred ccEEEEccccchhhcCcchHHHHHH-----------------HHHcCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 7899999999998876654322211 123454 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCC
Q 003552 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (811)
Q Consensus 599 ~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 678 (811)
+..++++|+|+|+|+. .+.+++.++++++.++|.|+|.+ .++..+++. +|++|+||..|+|
T Consensus 215 ~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~ 275 (360)
T cd04951 215 SDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGF 275 (360)
T ss_pred hhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEEEeccc------ccHHHHHHh-hceEEecccccCC
Confidence 8778999999999987 56788888899999999999943 357788885 9999999999999
Q ss_pred CHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003552 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 758 (811)
Q Consensus 679 GltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~ 758 (811)
|++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|.++++ .+++.++.++++ ++.+.++|||+.
T Consensus 276 ~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~ 349 (360)
T cd04951 276 GLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILK---MSGEERDIIGAR-RERIVKKFSINS 349 (360)
T ss_pred ChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHH
Confidence 9999999999999999999999999976 7999999999999999976652 467777777777 888889999999
Q ss_pred HHHHHHHHHH
Q 003552 759 YSERLMTLAG 768 (811)
Q Consensus 759 ~a~~ll~Ly~ 768 (811)
++++++++|+
T Consensus 350 ~~~~~~~~y~ 359 (360)
T cd04951 350 IVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 45
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=5.8e-34 Score=316.43 Aligned_cols=348 Identities=16% Similarity=0.217 Sum_probs=241.5
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC--CCceeeceeEEeccCCCCCCCccccceeee
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~--GheV~~~ilVvT~~~p~~~~~~~~~~~e~i 356 (811)
|||+++++. + |..||++.++. +|++.|.++ |++|. ++++..+... . ....+
T Consensus 1 mkI~~~~~~-~---------~~~GG~e~~~~--------~l~~~L~~~~~g~~v~----v~~~~~~~~~--~---~~~~~ 53 (359)
T PRK09922 1 MKIAFIGEA-V---------SGFGGMETVIS--------NVINTFEESKINCEMF----FFCRNDKMDK--A---WLKEI 53 (359)
T ss_pred CeeEEeccc-c---------cCCCchhHHHH--------HHHHHhhhcCcceeEE----EEecCCCCCh--H---HHHhc
Confidence 799999864 2 34699999999 777778889 77777 7776532110 0 00000
Q ss_pred cCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE--E
Q 003552 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ--C 434 (811)
Q Consensus 357 ~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~--v 434 (811)
.-.......++++. .. + .....+.+.+. +.+||+||+|.....+++.++++..++|. +
T Consensus 54 ~~~~~~~~~~~~~~----------~~----~---~~~~~l~~~l~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (359)
T PRK09922 54 KYAQSFSNIKLSFL----------RR----A---KHVYNFSKWLK---ETQPDIVICIDVISCLYANKARKKSGKQFKIF 113 (359)
T ss_pred chhcccccchhhhh----------cc----c---HHHHHHHHHHH---hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEE
Confidence 00000000011100 00 0 11122333333 35899999998766677777777777654 4
Q ss_pred EEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003552 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (811)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi 514 (811)
.+.|...... . .+. ...+..+|.++++|....+.. ...|+
T Consensus 114 ~~~h~~~~~~----~--------~~~--------~~~~~~~d~~i~~S~~~~~~~--------------------~~~~~ 153 (359)
T PRK09922 114 SWPHFSLDHK----K--------HAE--------CKKITCADYHLAISSGIKEQM--------------------MARGI 153 (359)
T ss_pred EEecCccccc----c--------hhh--------hhhhhcCCEEEEcCHHHHHHH--------------------HHcCC
Confidence 4455321100 0 000 012368999999998765521 11244
Q ss_pred CCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccC--ccCCHHHHHH
Q 003552 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD--HVKNMTGLVE 592 (811)
Q Consensus 515 ~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~--~~Kgi~~Lle 592 (811)
+ .+++.+||||+|.+.+..... ...+++.++++||+. +.||++.+++
T Consensus 154 ~--~~ki~vi~N~id~~~~~~~~~-----------------------------~~~~~~~i~~~Grl~~~~~k~~~~l~~ 202 (359)
T PRK09922 154 S--AQRISVIYNPVEIKTIIIPPP-----------------------------ERDKPAVFLYVGRLKFEGQKNVKELFD 202 (359)
T ss_pred C--HHHEEEEcCCCCHHHccCCCc-----------------------------ccCCCcEEEEEEEEecccCcCHHHHHH
Confidence 3 678999999999654432110 023567899999996 4699999999
Q ss_pred HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEec
Q 003552 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (811)
Q Consensus 593 A~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~P 672 (811)
++.++. ++++|+|+|+|++ .+.++++++++++.++|.|+|++.+ +.+++..+++. +|++|+|
T Consensus 203 a~~~~~---~~~~l~ivG~g~~------------~~~l~~~~~~~~l~~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~ 264 (359)
T PRK09922 203 GLSQTT---GEWQLHIIGDGSD------------FEKCKAYSRELGIEQRIIWHGWQSQ--PWEVVQQKIKN-VSALLLT 264 (359)
T ss_pred HHHhhC---CCeEEEEEeCCcc------------HHHHHHHHHHcCCCCeEEEecccCC--cHHHHHHHHhc-CcEEEEC
Confidence 999874 3799999999987 6778999999999999999996543 34678888885 9999999
Q ss_pred CCCCCCCHHHHHHHHcCCCEEEcC-CCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003552 673 AFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (811)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVIAT~-~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 751 (811)
|.+|+||++++||||||+|||+|+ .||+.|+|.+|.+|++++++|+++++++|.+++ +|++.+ +.++.....
T Consensus 265 s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~----~~~~~~---~~~~~~~~~ 337 (359)
T PRK09922 265 SKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVI----SGEVKY---QHDAIPNSI 337 (359)
T ss_pred CcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHH----hCcccC---CHHHHHHHH
Confidence 999999999999999999999999 999999999999999999999999999996655 787744 233333444
Q ss_pred HhCCHHHHHHHHHHHHHH
Q 003552 752 ERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 752 e~yswe~~a~~ll~Ly~~ 769 (811)
.+|+-+.+.+++.++|..
T Consensus 338 ~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 338 ERFYEVLYFKNLNNALFS 355 (359)
T ss_pred HHhhHHHHHHHHHHHHHH
Confidence 778888888998888763
No 46
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=3e-33 Score=317.35 Aligned_cols=372 Identities=14% Similarity=0.129 Sum_probs=243.8
Q ss_pred CcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCC-CceeeceeEEeccCCCCCC-C------c
Q 003552 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQG-LDISPKILIVTRLIPDAKG-T------T 348 (811)
Q Consensus 277 m~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~G-heV~~~ilVvT~~~p~~~~-~------~ 348 (811)
+.|||+|++..+. |..+|..+.++ .++..|+++| |+|+ |+++..+.... . +
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 4699999998776 67899999999 7788899999 7999 99887653211 0 0
Q ss_pred cccceee---ecCccCeEEEEecCcccccccccccc--ccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH-
Q 003552 349 CNQRLER---VSGTEHTHILRVPFRSEKGILRQWIS--RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLV- 421 (811)
Q Consensus 349 ~~~~~e~---i~~~~~v~Ilrvp~~~~~~~~~~~is--r~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~-~lv- 421 (811)
+....++ +....+.+|.|+|..+.. .++...+ +..+++ ..++.+.+.+ .+|||||.+.... ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p-~yp~r~~~~~r~~~~-----~~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIK-FYPGKFSTDKRSILP-----VGDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEecccccc-cCcccccccccccCC-----hHHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 1111111 111112345555433221 1111000 011111 1234444443 4999999998765 554
Q ss_pred -HHHHHHHcCCcEEEEecCCccccCCC-Chh-hHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccc
Q 003552 422 -ASLLAYKMGITQCTIAHALEKTKYPD-SDI-YWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYES 498 (811)
Q Consensus 422 -a~lla~~lgvp~v~t~H~l~~~k~~~-s~~-~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s 498 (811)
|..+++++++ +|.+.|+... .|.. ... ..... ...++.++ ..-.++|.+++.|....+ .
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~~~--l~~~~~~~----~~r~~~d~vi~pS~~~~~-l--------- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVKAF--LLKYINSW----VVDIYCHKVIRLSAATQD-Y--------- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHHHhccchHHHH--HHHHHHHH----HHHHhcCEEEccCHHHHH-H---------
Confidence 5666666655 8889998321 1110 000 00000 01111111 111348999999975432 0
Q ss_pred ccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEE
Q 003552 499 HTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSM 578 (811)
Q Consensus 499 ~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~v 578 (811)
.......++|||.+.|.|....... ... ..+.-.+.++|+
T Consensus 195 -------------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~-~~~~~~~~~l~v 234 (462)
T PLN02846 195 -------------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN-GEQAFTKGAYYI 234 (462)
T ss_pred -------------------hhCEEecCceechhhcCCCcccHhh--------------------hcC-CCCCcceEEEEE
Confidence 1122334589999988776432111 011 001113579999
Q ss_pred eccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHH
Q 003552 579 ARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGEL 658 (811)
Q Consensus 579 GRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el 658 (811)
|||.+.||++.|++|++++.+..++++|+|+|+|++ .++++++++++++..++ |.| ..+.++
T Consensus 235 GRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G----~~~~~~- 296 (462)
T PLN02846 235 GKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPG----RDHADP- 296 (462)
T ss_pred ecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECC----CCCHHH-
Confidence 999999999999999999987778999999999998 78899999999987555 777 333443
Q ss_pred HHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHH
Q 003552 659 YRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSH 738 (811)
Q Consensus 659 ~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~ 738 (811)
+++ ++|+||+||.+|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. +++
T Consensus 297 --~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~-- 365 (462)
T PLN02846 297 --LFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP-- 365 (462)
T ss_pred --HHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc--
Confidence 555 48999999999999999999999999999999998 59999999999994 89999999977662 233
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 739 WKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 739 ~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
..++.+++ +.|||+..+++++++|+.=
T Consensus 366 -~~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 -APLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred -hhHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 22333332 5899999999999999754
No 47
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=1.3e-33 Score=309.28 Aligned_cols=346 Identities=14% Similarity=0.178 Sum_probs=248.5
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||+++++.. ..||.+.++. ++++.|++.||+|+ ++|...... ...... ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~----~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEI----EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHH----HH
Confidence 688887643 2599999999 66667788999999 887653221 011111 11
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~-v~t~H 438 (811)
.++.+++++.... ..+ .+...+.+.+. ..+||+||+|......++..+++..+.|. +...|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2455665543321 112 22222333222 45899999999877677777777788775 45667
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
.............+ . ...+...+..+|.++++|....+.... . + ..
T Consensus 113 ~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~-~--~~ 158 (358)
T cd03812 113 NTSDSHDKKKKILK--------Y---KVLRKLINRLATDYLACSEEAGKWLFG--------------------K-V--KN 158 (358)
T ss_pred cccccccccchhhH--------H---HHHHHHHHhcCCEEEEcCHHHHHHHHh--------------------C-C--Cc
Confidence 65432211111000 0 112345778899999999876552111 0 1 25
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.+||||+|.+.|.+........ +..+. ..+++.|+++||+.+.||++.+++|+.++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKKR------------------RELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhHH------------------HHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 7899999999998886653322110 11232 467889999999999999999999999999
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCC
Q 003552 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (811)
Q Consensus 599 ~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 678 (811)
+.+++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. +|++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999987 5678888999999999999994 3467888885 9999999999999
Q ss_pred CHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003552 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (811)
Q Consensus 679 GltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 751 (811)
|++++|||+||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+.++.+...+.....
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~ 347 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLD 347 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccch
Confidence 9999999999999999999999999988 4677777778999999996655 899999988888776653
No 48
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=9e-33 Score=313.41 Aligned_cols=390 Identities=13% Similarity=0.074 Sum_probs=255.4
Q ss_pred CCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceee
Q 003552 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 355 (811)
Q Consensus 276 pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~ 355 (811)
|.-.||++++.-- +|.+..+. ++++.|+++||+|+ |+|...+.. .+.
T Consensus 1 ~~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~ 47 (415)
T cd03816 1 PKRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDE 47 (415)
T ss_pred CCccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHH
Confidence 3456788887522 35556667 67888899999999 887653211 111
Q ss_pred ecCccCeEEEEecCcc-ccccccccccccCchhhHHHHHH---HHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHH
Q 003552 356 VSGTEHTHILRVPFRS-EKGILRQWISRFDVWPYLETFTE---DVGSEITAELQGFPDFIIGNYSDG---NLVASLLAYK 428 (811)
Q Consensus 356 i~~~~~v~Ilrvp~~~-~~~~~~~~isr~~i~~~l~~f~~---~~~~~i~~~~~~~PDlIh~h~~~~---~lva~lla~~ 428 (811)
.....++.+.+++... ..+. ......+...... .+...+.. ..+||+||+|.... ...+.++++.
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~ 119 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLL 119 (415)
T ss_pred HhcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 1122357777776653 1100 0111112111111 11121222 45899999987543 3456666777
Q ss_pred cCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccce
Q 003552 429 MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLY 508 (811)
Q Consensus 429 lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly 508 (811)
.++|+|++.|+.+..... .. .........+.. ..+...++.||.||++|....+...
T Consensus 120 ~~~~~V~~~h~~~~~~~~-~~--~~~~~~~~~~~~--~~e~~~~~~ad~ii~vS~~~~~~l~------------------ 176 (415)
T cd03816 120 RRTKLIIDWHNYGYTILA-LK--LGENHPLVRLAK--WYEKLFGRLADYNLCVTKAMKEDLQ------------------ 176 (415)
T ss_pred hCCeEEEEcCCchHHHHh-cc--cCCCCHHHHHHH--HHHHHHhhcCCEeeecCHHHHHHHH------------------
Confidence 899999999986432110 00 000000011111 2356678899999999988765211
Q ss_pred eeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccc-cccccCCCCCCCCCEEEEEeccCccCCH
Q 003552 509 RVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ-NDEHVGTLSDRSKPIVFSMARLDHVKNM 587 (811)
Q Consensus 509 ~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~-~~~~~g~l~~~~k~iIl~vGRL~~~Kgi 587 (811)
..|++ ..|+.|||||. ...|.|......... +... ..-+++.. .....+.. .++..+++++||+.+.||+
T Consensus 177 --~~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~ 247 (415)
T cd03816 177 --QFNNW--KIRATVLYDRP-PEQFRPLPLEEKHEL-FLKL--AKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDF 247 (415)
T ss_pred --hhhcc--CCCeeecCCCC-HHHceeCcHHHHHHH-HHhc--cccccccccccccceec-CCCceEEEEeccccCCCCH
Confidence 12333 78999999994 566777543321110 0000 00000000 00011221 2345678889999999999
Q ss_pred HHHHHHHHHhhc------cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHH
Q 003552 588 TGLVECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRY 661 (811)
Q Consensus 588 ~~LleA~~~l~~------~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ 661 (811)
+.|++|+..+.+ .+++++|+|+|+|+. .+.++++++++++.+.+.+.| .++.+++..+
T Consensus 248 ~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~ 311 (415)
T cd03816 248 GILLDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKL 311 (415)
T ss_pred HHHHHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHH
Confidence 999999999864 246899999999987 678999999999975444556 6778999999
Q ss_pred HHccccEEEecC---CCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCC---
Q 003552 662 IADTKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN--- 735 (811)
Q Consensus 662 ia~aadvfV~PS---~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~d--- 735 (811)
|+. +|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +|
T Consensus 312 l~~-aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~ 384 (415)
T cd03816 312 LAS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPN 384 (415)
T ss_pred HHh-CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCC
Confidence 995 99999753 35789999999999999999999999999999999999994 8999999996655 77
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003552 736 PSHWKKISDGGLKRIYERYTWKIYSERL 763 (811)
Q Consensus 736 p~~~~~ms~~a~~~v~e~yswe~~a~~l 763 (811)
|+.+++|+++|++++ .++|+...++.
T Consensus 385 ~~~~~~m~~~~~~~~--~~~~~~~~~~~ 410 (415)
T cd03816 385 RGKLNSLKKGAQEES--ELRWDENWDRV 410 (415)
T ss_pred HHHHHHHHHHHHHhh--hcCHHHHHHHH
Confidence 999999999999997 56777554444
No 49
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=3.7e-33 Score=305.74 Aligned_cols=343 Identities=17% Similarity=0.215 Sum_probs=246.6
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecC
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~ 358 (811)
|||++++... ..||.+.++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 2489999999 67778899999999 7764410
Q ss_pred ccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc--CCcEEEE
Q 003552 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM--GITQCTI 436 (811)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~l--gvp~v~t 436 (811)
.+.+.+. ..+|||||+|....+.+......+. ++|.|++
T Consensus 42 ------------------------------------~~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ------------------------------------ALISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ------------------------------------hhhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0001111 3489999999866655444444445 9999999
Q ss_pred ecCCccccCC----CChhhH-hh-----hhhhhh---hhhhhh-HHHHHH-hhCCEEEecCHHHHhhccccccccccccc
Q 003552 437 AHALEKTKYP----DSDIYW-KK-----FDEKYH---FSCQFT-ADLIAM-NNADFIITSTYQEIAGTKNTVGQYESHTA 501 (811)
Q Consensus 437 ~H~l~~~k~~----~s~~~~-~~-----~~~~y~---f~~~~~-~e~~a~-~~AD~IIt~S~~~~~~~k~~v~qy~s~~~ 501 (811)
+|+....... .....+ .. ....+. ...+.. .....+ ..++.++++|....+... +
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~----~------ 152 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCAR----S------ 152 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHH----h------
Confidence 9986432110 000000 00 000000 001100 011112 457778888866544211 1
Q ss_pred cccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEecc
Q 003552 502 FTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL 581 (811)
Q Consensus 502 ~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL 581 (811)
...+...++.++|||+|.+.|.|......+ +.+++ +++++++++.|+.
T Consensus 153 -----------~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 153 -----------SSLFKGIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred -----------ccccCCCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 111226789999999999988775443221 22344 4566777777777
Q ss_pred Cc--cCCHHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCC-hHH
Q 003552 582 DH--VKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR-NGE 657 (811)
Q Consensus 582 ~~--~Kgi~~LleA~~~l~~~-~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~-~~e 657 (811)
.. .||++.+++++..+.+. .+++.++++|++.. ... .++.++|.|+| .++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~------------~~~-------~~~~~~v~~~g----~~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDP------------EIP-------PDLPFPVHYLG----SLNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCch------------hhh-------ccCCCceEecC----CcCCHHH
Confidence 65 89999999999998764 57899999999866 111 15567899999 555 678
Q ss_pred HHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHH
Q 003552 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (811)
Q Consensus 658 l~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~ 737 (811)
+..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|.++++++|.+++ +|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 8888985 9999999999999999999999999999999999999999999999999999999999996655 7999
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 738 HWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 738 ~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
.+.++++++++.+.++|||+.++++++++|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 333 EREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999863
No 50
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=2.4e-32 Score=292.61 Aligned_cols=345 Identities=17% Similarity=0.241 Sum_probs=251.5
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++++.. + .||.+.++. +|++.|+++||+|+ +++....+. . .. ...
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~--~----~~---~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEP--P----FY---ELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCC--C----cc---ccC
Confidence 6888887554 2 589999998 77778889999999 887664320 0 00 011
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCC-cEEEEec
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGI-TQCTIAH 438 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgv-p~v~t~H 438 (811)
.++.+..++...... + ...+ .+...+.+.+. ..+||+||++++. ....+.....+. |++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----~---~~~~----~~~~~~~~~l~---~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----L---LARF----KKLRRLRKLLK---NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----h---hccc----cchHHHHHhhc---ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 234455444332110 0 0001 11112222222 3599999999877 222233334454 9999999
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
+....... ...+. ..+...++.+|.+++.|...... + .....
T Consensus 114 ~~~~~~~~--~~~~~------------~~~~~~~~~~d~ii~~s~~~~~~-------~-----------------~~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLRRL------------LLRRLLYRRADAVVVLTEEDRAL-------Y-----------------YKKFN 155 (348)
T ss_pred CCccchhh--hhHHH------------HHHHHHHhcCCEEEEeCHHHHHH-------h-----------------hccCC
Confidence 75432110 00000 02456788999999999876310 0 01126
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 789999999998655432 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCC
Q 003552 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (811)
Q Consensus 599 ~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 678 (811)
+..++++|+|+|++.. ...+.++++++++.++|.|.|. .+++..+++. +|+++.||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8789999999999877 5667788999999999999993 4678889995 9999999999999
Q ss_pred CHHHHHHHHcCCCEEEcCCC-CcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003552 679 GLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (811)
Q Consensus 679 GltvlEAMa~GlPVIAT~~G-G~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe 757 (811)
|++++|||+||+|||+|+.+ +..+++.++.+|++++++|+++++++|.+++ +||+.+++|++++++.+ ++|||+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999865 5677888888999999999999999996654 89999999999997665 899999
Q ss_pred HHHHHHH
Q 003552 758 IYSERLM 764 (811)
Q Consensus 758 ~~a~~ll 764 (811)
.+++++.
T Consensus 341 ~~~~~~~ 347 (348)
T cd03820 341 NIIKQWE 347 (348)
T ss_pred HHHHHhc
Confidence 9998875
No 51
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=7.4e-33 Score=313.08 Aligned_cols=278 Identities=16% Similarity=0.100 Sum_probs=193.0
Q ss_pred CCCceEEEEcCCCc---hHHHH------HHHHHcCCcEEEEecCCcccc----CCCChhhHhhhh--------------h
Q 003552 405 QGFPDFIIGNYSDG---NLVAS------LLAYKMGITQCTIAHALEKTK----YPDSDIYWKKFD--------------E 457 (811)
Q Consensus 405 ~~~PDlIh~h~~~~---~lva~------lla~~lgvp~v~t~H~l~~~k----~~~s~~~~~~~~--------------~ 457 (811)
..+|||||.|...+ ++... +..+..++|+|.|.|+.+... |...--.|+.-. +
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 56899999998776 33211 112345799999999987432 111001111100 0
Q ss_pred h--hhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCC
Q 003552 458 K--YHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 535 (811)
Q Consensus 458 ~--y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p 535 (811)
. ..|..+...-....+.++.+|++|....+... ...+ ..++.+||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~---------------------~~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFN---------------------SLYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHH---------------------HHcC--CCCEEEeCCCcCcccccc
Confidence 0 00111111111223457899999987665211 0112 468999999999754333
Q ss_pred CchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEecc--CccCCHHHHHHHHHHhhccCCCeEEEEEeCcC
Q 003552 536 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL--DHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 613 (811)
Q Consensus 536 ~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL--~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~ 613 (811)
..+... ... .+++++|+++|+. .+.||++.|++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~----------------------~~~--~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPP----------------------VRE--TQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred cccccc----------------------ccc--CCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 211100 000 3467889999994 47899999999999863 579999999875
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEE
Q 003552 614 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 693 (811)
Q Consensus 614 ~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVI 693 (811)
.. ...+|.++|... +..++..+|+. +|+||+||.+|+||++++||||||+|||
T Consensus 282 ~~-----------------------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 PF-----------------------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred cc-----------------------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 40 024688888543 45688888885 9999999999999999999999999999
Q ss_pred EcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK----ISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 694 AT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~----ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
+|+.||.+|++.++ +|++++|+|++++|+++ +++..++ +.+++++++.++|||+.++++|+++|+.
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999775 89999999999999754 4444443 3456899998999999999999999974
No 52
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=3.9e-32 Score=292.22 Aligned_cols=356 Identities=18% Similarity=0.244 Sum_probs=257.9
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++.. .||...++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57788754 278888888 77778889999999 8876532221 0112
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-HcCCcEEEEec
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAH 438 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~-~lgvp~v~t~H 438 (811)
.++.+..+|..... . ..+..+. ....+.+.+. ..+||+||+|...+.+++.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~---~~~~~~~-~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------I---NPFKDLK-ALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------c---ChHhHHH-HHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 24566666654310 1 1111111 1112223332 35899999998877777777776 45566777788
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
+........ ...+ ..+. ..++..++.+|.+++.|....+...+ ..+.+ ..
T Consensus 113 ~~~~~~~~~-~~~~----~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~-------------------~~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLKR----RLYL-----LLERLALRFTDKVIFQNEDDRDLALK-------------------LGIIK-KK 162 (359)
T ss_pred Ccchhhccc-hhHH----HHHH-----HHHHHHHhhccEEEEcCHHHHHHHHH-------------------hcCCC-cC
Confidence 764322111 1011 1111 22456778899999999887652111 01111 13
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.++++|+|.+.+.+.... .+.+++.|+++||+.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 567788999998776543210 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH-HHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCC
Q 003552 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE-LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (811)
Q Consensus 599 ~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~-li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 677 (811)
+.+++++|+|+|++... ..... .+.+.+..++|.|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE------------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCcc------------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 87889999999998761 11111 3667788899999994 3568888885 999999999999
Q ss_pred CCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003552 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (811)
Q Consensus 678 fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe 757 (811)
||++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.++ ..|++.+.++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l----~~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERL----IEDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 999999999999999999999999999999999999999999999999654 4899999999999999999999999
Q ss_pred HHHHHHH
Q 003552 758 IYSERLM 764 (811)
Q Consensus 758 ~~a~~ll 764 (811)
.++++++
T Consensus 352 ~~~~~~~ 358 (359)
T cd03808 352 IVVKKLL 358 (359)
T ss_pred HHHHHhh
Confidence 9999875
No 53
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=8.5e-33 Score=301.16 Aligned_cols=364 Identities=20% Similarity=0.244 Sum_probs=256.6
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++............ ...
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~~- 54 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RAA- 54 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hhc-
Confidence 688887766531 5799999999 77778899999999 776653222110000 000
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (811)
... .... .....+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 55 --~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 55 --LRL---LLRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred --ccc---cccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 000 0000 001111111111111111111 35899999998776444 6679999999998
Q ss_pred CccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003552 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (811)
Q Consensus 440 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~ 519 (811)
+.....+...... ....+ .......+..+|.+++.|....+.+.+. .++ ...
T Consensus 113 ~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~--~~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG--FRRYF-----RRLLRRALRRADAIITVSEATKRDLLRY-------------------LGV--PPD 164 (365)
T ss_pred chhhhCcccCCHH--HHHHH-----HHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------hCc--CHH
Confidence 7654433211111 00011 1224568899999999998765522111 112 256
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhc
Q 003552 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (811)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 599 (811)
++.++|||+|...+.+..... +.. ... ..+++.|+++||+.+.||++.+++++.++.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~~~-------------------~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-VLR-------------------ALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-HHH-------------------Hhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998886654332 100 111 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCC
Q 003552 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (811)
Q Consensus 600 ~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG 679 (811)
..++++|+++|++... .......+++.++.++|.|+| .++.+++..+++. +|+++.||..|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 122233336778899999999 7778899999995 99999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003552 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 759 (811)
Q Consensus 680 ltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~ 759 (811)
++++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.++ .+|++.+.++++++++.+ ++|||+.+
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l----~~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERL----LEDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHH----hcCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 469999999999999999655 489999999999999766 88999999
Q ss_pred HHHHH
Q 003552 760 SERLM 764 (811)
Q Consensus 760 a~~ll 764 (811)
+++++
T Consensus 360 ~~~~~ 364 (365)
T cd03809 360 ARRTL 364 (365)
T ss_pred HHHHh
Confidence 99886
No 54
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=8.8e-32 Score=290.35 Aligned_cols=362 Identities=23% Similarity=0.328 Sum_probs=264.6
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccc
Q 003552 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (811)
Q Consensus 301 ~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~i 380 (811)
.||...++. .+++.|+++||+|+ +++................ .. ..... ..... +.
T Consensus 13 ~~g~~~~~~--------~~~~~l~~~g~~v~----v~~~~~~~~~~~~~~~~~~--~~--~~~~~-~~~~~-------~~ 68 (377)
T cd03798 13 NGGGGIFVK--------ELARALAKRGVEVT----VLAPGPWGPKLLDLLKGRL--VG--VERLP-VLLPV-------VP 68 (377)
T ss_pred CchHHHHHH--------HHHHHHHHCCCceE----EEecCCCCCCchhhccccc--cc--ccccc-cCcch-------hh
Confidence 588888988 77788899999999 8876633221110000000 00 00000 00000 00
Q ss_pred cccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhh
Q 003552 381 SRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459 (811)
Q Consensus 381 sr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y 459 (811)
.. ........+...+.+.+.. ...+||+||+|+... ...+..+++..++|++.+.|+..........
T Consensus 69 ~~-~~~~~~~~~~~~~~~~l~~-~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---------- 136 (377)
T cd03798 69 LL-KGPLLYLLAARALLKLLKL-KRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR---------- 136 (377)
T ss_pred cc-ccchhHHHHHHHHHHHHhc-ccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh----------
Confidence 00 0011112233333333331 145999999997554 5667777788899999999986543322111
Q ss_pred hhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchH
Q 003552 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (811)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~ 539 (811)
.........++.+|.+++.|....+...+ .+ .+..++.++|||+|...+.+....
T Consensus 137 ---~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--------------------~~--~~~~~~~~i~~~~~~~~~~~~~~~ 191 (377)
T cd03798 137 ---LLRALLRRALRRADAVIAVSEALADELKA--------------------LG--IDPEKVTVIPNGVDTERFSPADRA 191 (377)
T ss_pred ---hHHHHHHHHHhcCCeEEeCCHHHHHHHHH--------------------hc--CCCCceEEcCCCcCcccCCCcchH
Confidence 01112345788999999999887652211 01 226789999999999888765432
Q ss_pred HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCc
Q 003552 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (811)
Q Consensus 540 ~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~ 619 (811)
.. . ..+. ..+++.++++|++.+.||++.+++++..+.+..++++|+++|.+..
T Consensus 192 ~~--~------------------~~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~----- 244 (377)
T cd03798 192 EA--R------------------KLGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL----- 244 (377)
T ss_pred HH--H------------------hccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----
Confidence 21 0 0111 4577899999999999999999999999988788999999999876
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC
Q 003552 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (811)
Q Consensus 620 d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG 699 (811)
...+.+.++++++.++|.+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+++.|+
T Consensus 245 -------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~ 312 (377)
T cd03798 245 -------REALEALAAELGLEDRVTFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG 312 (377)
T ss_pred -------hHHHHHHHHhcCCcceEEEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCC
Confidence 567788888899999999999 7788999999996 9999999999999999999999999999999999
Q ss_pred cccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 700 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 700 ~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
..+++.++.+|++++++|+++++++|.+++ ++++. +++.++++.+.++|||+.+++++.++++
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 313 IPEIITDGENGLLVPPGDPEALAEAILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred hHHHhcCCcceeEECCCCHHHHHHHHHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 999999999999999999999999996655 78776 7888999999999999999999999875
No 55
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=3.3e-32 Score=294.89 Aligned_cols=353 Identities=16% Similarity=0.198 Sum_probs=246.3
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||++++++..| ..+||.+.++. .|+++|+++||+|+ +++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68999876543 23689999999 67777889999999 887653322111000
Q ss_pred cCeEEEEecC--ccccccccccccccCchhhH-HHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003552 360 EHTHILRVPF--RSEKGILRQWISRFDVWPYL-ETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (811)
Q Consensus 360 ~~v~Ilrvp~--~~~~~~~~~~isr~~i~~~l-~~f~~~~~~~i~~~~~~~PDlIh~h~~~~-~lva~lla~~lgvp~v~ 435 (811)
.+..+...+. ....... ........+. ..+...+.+.+. ..+||+||+|.... .......++..++|+++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALP---RDLFHLSDYDNPAVVAEFARLLE---DFRPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCch---hhhhHHHhccCHHHHHHHHHHHH---HcCCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111110 0000000 0000000000 112222223333 34899999998754 33444566778999999
Q ss_pred EecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003552 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (811)
Q Consensus 436 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~ 515 (811)
+.|+.+.... +. .......|.++++|....+...+ .+..
T Consensus 126 ~~hd~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~~--------------------~~~~ 164 (359)
T cd03823 126 TLHDYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYVA--------------------NGLF 164 (359)
T ss_pred EEeeeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHHH--------------------cCCC
Confidence 9997543210 00 00112339999999876552111 1222
Q ss_pred CCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHH
Q 003552 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (811)
Q Consensus 516 ~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~ 595 (811)
..++.+||||+|...+.+... + .+.+++.++++||+.+.||++.+++++.
T Consensus 165 --~~~~~vi~n~~~~~~~~~~~~--------------------------~--~~~~~~~i~~~G~~~~~k~~~~li~~~~ 214 (359)
T cd03823 165 --AEKISVIRNGIDLDRAKRPRR--------------------------A--PPGGRLRFGFIGQLTPHKGVDLLLEAFK 214 (359)
T ss_pred --ccceEEecCCcChhhcccccc--------------------------C--CCCCceEEEEEecCccccCHHHHHHHHH
Confidence 468999999999987754321 0 1456788999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCC-
Q 003552 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF- 674 (811)
Q Consensus 596 ~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~- 674 (811)
++.+ ++++|+++|++.. ........ +..++|.++| .++.+++..+++. +|++++||.
T Consensus 215 ~l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~ 272 (359)
T cd03823 215 RLPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIW 272 (359)
T ss_pred HHHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcc
Confidence 9876 7899999999876 11111111 5678899999 6778999999995 999999997
Q ss_pred CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
Q 003552 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 754 (811)
Q Consensus 675 ~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~y 754 (811)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.+++++++++++..
T Consensus 273 ~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~--- 345 (359)
T cd03823 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRS--- 345 (359)
T ss_pred cCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhh---
Confidence 7999999999999999999999999999999999999999999999999996655 799999999999988763
Q ss_pred CHHHHHHHHHHHHH
Q 003552 755 TWKIYSERLMTLAG 768 (811)
Q Consensus 755 swe~~a~~ll~Ly~ 768 (811)
.+.++++++++|+
T Consensus 346 -~~~~~~~~~~~~~ 358 (359)
T cd03823 346 -IEDQAEEYLKLYR 358 (359)
T ss_pred -HHHHHHHHHHHhh
Confidence 3999999999875
No 56
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=5.7e-32 Score=307.31 Aligned_cols=368 Identities=17% Similarity=0.205 Sum_probs=243.1
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHC--CCceeeceeEEeccCCCCCCCcc--ccceeeecCccCeEEEEec-Ccccccc
Q 003552 301 TGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTC--NQRLERVSGTEHTHILRVP-FRSEKGI 375 (811)
Q Consensus 301 ~GG~~vyvld~araLe~~L~~~L~~~--GheV~~~ilVvT~~~p~~~~~~~--~~~~e~i~~~~~v~Ilrvp-~~~~~~~ 375 (811)
.||.+..+.+.|++| .+. ||+|+ |+|........... ......+....++.++++. .+
T Consensus 13 ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~----- 75 (419)
T cd03806 13 GGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYR----- 75 (419)
T ss_pred CCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecce-----
Confidence 369999999777765 445 88998 99988543210000 0001111111234444442 11
Q ss_pred ccccccccCchhh---HHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCCh--
Q 003552 376 LRQWISRFDVWPY---LETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSD-- 449 (811)
Q Consensus 376 ~~~~isr~~i~~~---l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~-- 449 (811)
.|+++ ..|+. +-.+...+...+......+||||+.+...+ .+.. +....++|++..+|-...+. +.-
T Consensus 76 --~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~--~~~~~~~~~i~y~h~P~~~~--d~l~~ 148 (419)
T cd03806 76 --KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPL--VRLLGGCPVGAYVHYPTIST--DMLQK 148 (419)
T ss_pred --eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHH--HHHhcCCeEEEEecCCcchH--HHHHH
Confidence 12222 22222 123333333333333245899999886443 2222 12224889999999321000 000
Q ss_pred hhHh-------------h---hh-hhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeec
Q 003552 450 IYWK-------------K---FD-EKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVH 512 (811)
Q Consensus 450 ~~~~-------------~---~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~ 512 (811)
+..+ . .. ..|+. .-...+..+++.||.|+++|....+..++. +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~k~~y~~-~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~---------------~---- 208 (419)
T cd03806 149 VRSREASYNNSATIARSPVLSKAKLLYYR-LFAFLYGLAGSFADVVMVNSTWTRNHIRSL---------------W---- 208 (419)
T ss_pred HhhccccccCccchhccchHHHHHHHHHH-HHHHHHHHHhhcCCEEEECCHHHHHHHHHH---------------h----
Confidence 0000 0 00 01110 011246778999999999998776532211 0
Q ss_pred cCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHH
Q 003552 513 GIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 592 (811)
Q Consensus 513 Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Lle 592 (811)
+. ..++.+|+||+|.+.|.+.... ...++++|+|+||+.+.||++.+++
T Consensus 209 ~~---~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~il~vgr~~~~K~~~~li~ 257 (419)
T cd03806 209 KR---NTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQILSIAQFRPEKNHPLQLR 257 (419)
T ss_pred Cc---CCCcEEEcCCCCHHHhcccccc----------------------------cccCCcEEEEEEeecCCCCHHHHHH
Confidence 01 2478999999998776543210 0245679999999999999999999
Q ss_pred HHHHhhccCC-----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcccc
Q 003552 593 CYGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 667 (811)
Q Consensus 593 A~~~l~~~~~-----~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aad 667 (811)
|++++.+..+ +++|+|+|++..+ ++..+.+.++++++++++.++|.|+| .++.+++..+|+. +|
T Consensus 258 A~~~l~~~~~~~~~~~~~lvivG~~~~~------~~~~~~~~L~~~~~~l~l~~~V~f~g----~v~~~~l~~~l~~-ad 326 (419)
T cd03806 258 AFAKLLKRLPEEIKEKIKLVLIGSCRNE------DDEKRVEDLKLLAKELGLEDKVEFVV----NAPFEELLEELST-AS 326 (419)
T ss_pred HHHHHHHhCcccccCceEEEEEcCCCCc------ccHHHHHHHHHHHHHhCCCCeEEEec----CCCHHHHHHHHHh-Ce
Confidence 9999987654 4999999998651 22346778899999999999999999 7888999999995 99
Q ss_pred EEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc-ccccc---cCCcEEEECCCCHHHHHHHHHHHHHhhcCCH-HHHHHH
Q 003552 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIE---HGASGFHIDPYHPDQAAELMADFFGKCKENP-SHWKKI 742 (811)
Q Consensus 668 vfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~-~EiI~---dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp-~~~~~m 742 (811)
++|+|+..|+||++++|||+||+|||+++.||+ .|++. +|.+|++++ |++++|++|.+++ +++ +.++.+
T Consensus 327 v~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll----~~~~~~~~~~ 400 (419)
T cd03806 327 IGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL----SLSEEERLRI 400 (419)
T ss_pred EEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH----hCCHHHHHHH
Confidence 999999999999999999999999999999886 57887 899999985 9999999997665 554 445555
Q ss_pred HHHHHHHHHHhCCHHHHHH
Q 003552 743 SDGGLKRIYERYTWKIYSE 761 (811)
Q Consensus 743 s~~a~~~v~e~yswe~~a~ 761 (811)
.++++.+.++|||+.+.+
T Consensus 401 -~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 401 -RRAARSSVKRFSDEEFER 418 (419)
T ss_pred -HHHHHHHHHhhCHHHhcc
Confidence 555556779999998754
No 57
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.2e-31 Score=307.12 Aligned_cols=394 Identities=17% Similarity=0.223 Sum_probs=257.6
Q ss_pred cCCCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccc
Q 003552 273 GRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR 352 (811)
Q Consensus 273 ~~~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~ 352 (811)
++....++|+++-|+- + ..||.+..+.+.|++| ++.|+++. |.|+|....... .+.
T Consensus 28 ~~~~~~~~v~f~HP~~--~--------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~~~----~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYT--N--------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDASP----DSL 83 (463)
T ss_pred cccCCCcEEEEECCCC--C--------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCCCH----HHH
Confidence 4555567898885543 1 2469999999666654 67788543 337876632111 111
Q ss_pred eeeecCccCeEE------EEecCccccccccccccccCchhhH---HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 003552 353 LERVSGTEHTHI------LRVPFRSEKGILRQWISRFDVWPYL---ETFTEDVGSEITAELQGFPDFIIGNYSDGNLVAS 423 (811)
Q Consensus 353 ~e~i~~~~~v~I------lrvp~~~~~~~~~~~isr~~i~~~l---~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~ 423 (811)
+......=++.+ +++. .+.|+++ ..|+++ -.....+.-.+.......||+++-....+ ...
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-------~~~~~~~-~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~ 153 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-------KRKWIEE-ETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTY 153 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-------ccccccc-ccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHH
Confidence 111111112211 1111 1245543 445442 22222222222222223666555332222 112
Q ss_pred HHHHHcCCcEEEEecCCcccc------------CCC----ChhhHhh-hhhhhhhhhhhhHHHHHHhhCCEEEecCHHHH
Q 003552 424 LLAYKMGITQCTIAHALEKTK------------YPD----SDIYWKK-FDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (811)
Q Consensus 424 lla~~lgvp~v~t~H~l~~~k------------~~~----s~~~~~~-~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (811)
.+++..++|+++.+|-..... +.. ....+.. ....|+.... ..+..+.+.||.|+|+|....
T Consensus 154 pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~ 232 (463)
T PLN02949 154 PLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTK 232 (463)
T ss_pred HHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHH
Confidence 234456899999999542111 000 0000000 1111211111 134567789999999998876
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCC
Q 003552 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (811)
Q Consensus 487 ~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~ 566 (811)
+..++. + +. +.++.+++||+|.+.+.+....
T Consensus 233 ~~l~~~---~----------------~~---~~~i~vvyp~vd~~~~~~~~~~--------------------------- 263 (463)
T PLN02949 233 SHIEAL---W----------------RI---PERIKRVYPPCDTSGLQALPLE--------------------------- 263 (463)
T ss_pred HHHHHH---c----------------CC---CCCeEEEcCCCCHHHcccCCcc---------------------------
Confidence 532211 0 11 3578899999997655221100
Q ss_pred CCCCCCCEEEEEeccCccCCHHHHHHHHHHhhc----cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003552 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (811)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~----~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (811)
...+++.++++||+.+.||++.+++|++++.+ ..++++|+|+|+++. .++.++.++++++++++++.++
T Consensus 264 -~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 264 -RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred -ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCc
Confidence 02356789999999999999999999998754 246899999999854 1223456789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcc-ccccc---CCcEEEECCCCH
Q 003552 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH---GASGFHIDPYHP 718 (811)
Q Consensus 643 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~-EiI~d---g~~G~li~p~D~ 718 (811)
|.|+| .++.+++..+|+. ++++|+|+..|+||++++|||+||+|||+++.||+. |++.+ |.+|++++ |+
T Consensus 337 V~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~ 409 (463)
T PLN02949 337 VEFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TV 409 (463)
T ss_pred EEEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CH
Confidence 99999 6778999999996 999999999999999999999999999999999985 77765 67899885 89
Q ss_pred HHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 719 DQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 719 e~lA~aI~~~l~~l~~-dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
+++|++|.+++ + +++.+++|+++|++++ ++|||+.+++++.+.++.
T Consensus 410 ~~la~ai~~ll----~~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 410 EEYADAILEVL----RMRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHHHHHH----hCCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 99999997665 5 6888999999999999 779999999999998764
No 58
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=1.2e-31 Score=287.21 Aligned_cols=351 Identities=18% Similarity=0.222 Sum_probs=250.1
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCc
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~ 359 (811)
||+++++... .||...++. .|++.|.++||+|. +++............. ..
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~~------~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLPS------NV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCcccccccc------ch
Confidence 6888876542 589999999 77778899999999 8876533221110000 00
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEec
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~-~~~lva~lla~~lgvp~v~t~H 438 (811)
........... ....+ .+...+.+.+.. .+||+||++.. ...+.+.+..+. ++|.+.+.|
T Consensus 52 ~~~~~~~~~~~-----------~~~~~----~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLK-----------SLRDL----LAILRLRRLLRK---EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeecc-----------cccch----hHHHHHHHHHHh---cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 00000000000 00111 122223333332 38999999988 555555544444 899999999
Q ss_pred CCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 439 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
+............+ ......++.+|.+++.|....+...+ + .+. ..
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~----~---------------~~~--~~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLK----L---------------LGI--PP 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHH----h---------------hcC--Cc
Confidence 87543321111000 12446788999999999876542111 1 111 15
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 598 (811)
.++.+||||+|.+.+.+...... ..+. +.+++.++++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999987765433211 0111 467789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCC
Q 003552 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (811)
Q Consensus 599 ~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 678 (811)
+.+++++|+++|+++. .+.+.++++++++.++|.|.|.. +++..+++. +|++|+||.+|++
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEeccc------CCHHHHHHh-CCEEEeCcccCCC
Confidence 8778999999999877 56677889999999999999942 246778885 9999999999999
Q ss_pred CHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCC
Q 003552 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 755 (811)
Q Consensus 679 GltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~ys 755 (811)
|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+.. +..+..+++.++++++++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALA-LLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHH-HHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999644433 356779999999999999999988886
No 59
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=2.9e-32 Score=306.84 Aligned_cols=285 Identities=14% Similarity=0.148 Sum_probs=204.3
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChh--hHhhhhhhhhhh--hhhhHHHHHHhhCCEEEe
Q 003552 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDI--YWKKFDEKYHFS--CQFTADLIAMNNADFIIT 480 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~--~~~~~~~~y~f~--~~~~~e~~a~~~AD~IIt 480 (811)
..++|+||+++........ .+..++|.+++.|+.+...+..... .+ .....|+.. .....|+..++.+|.|++
T Consensus 102 ~~~~D~v~~~~~~~~~~~~--~~~~~~p~i~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 102 AEPVDAIVVFSSAMAQYVT--PHVRGVPRIVDFVDVDSDKWLQYARTKRW-PLRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred hCCCCEEEEeccccceecc--ccccCCCeEeehhhHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 3589999998754322211 1356899999999864322110000 00 000011100 001246778999999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccc
Q 003552 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (811)
Q Consensus 481 ~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (811)
+|..+.+..++. .+. ...++.+||||+|.+.|.|.....
T Consensus 179 ~S~~~~~~l~~~-------------------~~~--~~~~v~vipngvd~~~f~~~~~~~-------------------- 217 (397)
T TIGR03087 179 VSRAEAELFRRL-------------------APE--AAGRITAFPNGVDADFFSPDRDYP-------------------- 217 (397)
T ss_pred cCHHHHHHHHHh-------------------CCC--CCCCeEEeecccchhhcCCCcccc--------------------
Confidence 999876632211 011 156899999999998886642210
Q ss_pred ccccCCCCCCCCCEEEEEeccCccCCHHHHH----HHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH
Q 003552 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 636 (811)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Ll----eA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~ 636 (811)
... ..++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +. +++
T Consensus 218 ---~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~----~~~ 275 (397)
T TIGR03087 218 ---NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PA----VRA 275 (397)
T ss_pred ---CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HH----HHH
Confidence 011 24567899999999999999988 56666766678999999999875 12 233
Q ss_pred cCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECC
Q 003552 637 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP 715 (811)
Q Consensus 637 ~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~-~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p 715 (811)
++..++|+|+|. ++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+. .+...+.+|++++
T Consensus 276 l~~~~~V~~~G~----v~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~- 346 (397)
T TIGR03087 276 LAALPGVTVTGS----VA--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA- 346 (397)
T ss_pred hccCCCeEEeee----cC--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-
Confidence 344577999994 43 47788885 999999997 69999999999999999999987643 3444456799986
Q ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 716 ~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
+|+++++++|.+++ +|++.+++|+++|++++.++|||+.+++++.++++
T Consensus 347 ~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 ADPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 89999999996554 89999999999999999999999999999999875
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=1.9e-31 Score=308.41 Aligned_cols=280 Identities=19% Similarity=0.225 Sum_probs=212.6
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCC--hhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecC
Q 003552 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS--DIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s--~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (811)
..++||+|++.......+ ++.....+|.++++|+-+....... ...|.. .|.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~---~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWNN---YYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHH---HHHH------HHhchhhCCEEEECC
Confidence 458999999876643333 4455668999999998543222111 111221 1111 122467899999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccccc
Q 003552 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (811)
Q Consensus 483 ~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (811)
....+.+.+..++| +. ..+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~--~~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YN--IEPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cC--CCCcEEEEcCCCcccccCccc-------------------------
Confidence 87665433333222 11 156899999998755443210
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (811)
..++..|+++||+.+.||++.|++|+.++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2344679999999999999999999999988889999999999976 5789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CcccccccCCcEEEECC----CC
Q 003552 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDP----YH 717 (811)
Q Consensus 643 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G-G~~EiI~dg~~G~li~p----~D 717 (811)
|.|+| ..+ +..+++ .+|+||+||.+|+||++++||||||+|||+|+.+ |+.|+|.+|.+|+++++ +|
T Consensus 378 V~f~G----~~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKG----HRN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcC----CCC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 99999 333 445566 4999999999999999999999999999999986 89999999999999984 33
Q ss_pred ----HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 718 ----PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 718 ----~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
++++|++|.++ ++ ++.+++|+++|++.+ ++|||+.++++|.++++.
T Consensus 450 ~~~~~~~la~~I~~l----l~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 450 EDQIITALAEKIVEY----FN-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVRE 499 (500)
T ss_pred hhHHHHHHHHHHHHH----hC-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 67777777554 44 557899999999977 889999999999998763
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=100.00 E-value=7.6e-31 Score=296.97 Aligned_cols=276 Identities=15% Similarity=0.239 Sum_probs=219.0
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCc-EEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecC
Q 003552 405 QGFPDFIIGNYSDG-NLVASLLAYKMGIT-QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (811)
Q Consensus 405 ~~~PDlIh~h~~~~-~lva~lla~~lgvp-~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (811)
..++|++|++.... +..+.++.++.+.+ ++.++|+..... ......+. .....+++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46788999865544 44555677777776 899999753211 11111111 11234578999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccccc
Q 003552 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (811)
Q Consensus 483 ~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (811)
....+..++. ++....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~---------------------~~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKR---------------------YPAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHH---------------------CCCccccEEEEECCcccccccCCC-------------------------
Confidence 8876633221 122267899999999987654320
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCC--CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~--~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (811)
...+++.|+++||+.+.||++.+++|+.++.+.++ +++++++|+|+. .+.+++++++.+..
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 02456789999999999999999999999988765 567788999876 56788888888888
Q ss_pred CcEEEeccccCcCChHHHHHHHHc-cccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCC-CH
Q 003552 641 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY-HP 718 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~-aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~-D~ 718 (811)
++|.|+| .++.+++.++++. .+|+||+||.+||||++++|||+||+|||||+.||..|+|.++.+|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 9999999 7778999999974 3789999999999999999999999999999999999999999999999875 89
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003552 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 764 (811)
Q Consensus 719 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll 764 (811)
++++++|.+++ +||+.+++|+++|++++.++|||+...+++.
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999996655 7999999999999999999999999988774
No 62
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=2.2e-29 Score=281.49 Aligned_cols=318 Identities=13% Similarity=0.055 Sum_probs=213.2
Q ss_pred HHHHHHHHCCC-ceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccccccCchh---hHHHH-
Q 003552 318 EMLLRIKRQGL-DISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP---YLETF- 392 (811)
Q Consensus 318 ~L~~~L~~~Gh-eV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~---~l~~f- 392 (811)
.++.+++++|+ +|+ |+|.... + .........+++|.|+|. .... .. +. .++. |+...
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~---~-----~~~~~~~~~~v~v~r~~~-~~~~--~~-~~--~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGS---E-----PIPALLNHPSIHIHLMVQ-PRLL--QR-LP--RVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCC---C-----CCHHHhcCCcEEEEECCC-cccc--cc-cc--cchHHHHHHHHHH
Confidence 46667788886 799 8874321 1 111112234689999975 2110 00 11 1222 22221
Q ss_pred --HHHHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhH
Q 003552 393 --TEDVGSEITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTA 467 (811)
Q Consensus 393 --~~~~~~~i~~~~~~~PDlIh~h~~~~---~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~ 467 (811)
...+...+.. ...+||+||+|.+.. .+.+.++++..++|++++.|+++........ ........+.. ..
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~---~~~~~~~~~~~--~~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSL---GRSHPLVRLYR--WY 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhccc---CCCCHHHHHHH--HH
Confidence 1122222211 246999999987553 4566777888899999999986421100000 00000111111 23
Q ss_pred HHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhh
Q 003552 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (811)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~ 547 (811)
++..++.||.||++|....+...+ ..|+ ++.+||||. .+.|.|......
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~-------------------~~g~-----~i~vi~n~~-~~~f~~~~~~~~------ 207 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQ-------------------NWGI-----RATVLYDQP-PEFFRPASLEIR------ 207 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHH-------------------hcCC-----CeEEECCCC-HHHcCcCCchhc------
Confidence 667889999999999887652111 0122 178999985 466655432100
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh-----------------ccCCCeEEEEEe
Q 003552 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-----------------QLRELVNLVVVA 610 (811)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~-----------------~~~~~v~LVIVG 610 (811)
.. .+.+.+++++||+.+.||++.+++|+..+. +..++++|+|+|
T Consensus 208 ----------------~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG 268 (371)
T PLN02275 208 ----------------LR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITG 268 (371)
T ss_pred ----------------cc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEe
Confidence 00 223457889999999999999999998873 235789999999
Q ss_pred CcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecC---CCCCCCHHHHHHHH
Q 003552 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA---FYEAFGLTVVEAMT 687 (811)
Q Consensus 611 ~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS---~~E~fGltvlEAMa 687 (811)
+|+. .++++++++++++.+ +.|.+. .++.+++..+|+. +|+||.|+ ..|+||++++||||
T Consensus 269 ~G~~------------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA 331 (371)
T PLN02275 269 KGPQ------------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFG 331 (371)
T ss_pred CCCC------------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHH
Confidence 9988 678999999999976 887651 4678999999995 99999863 24899999999999
Q ss_pred cCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHH
Q 003552 688 CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (811)
Q Consensus 688 ~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~ 728 (811)
||+|||+|+.||..|+|++|.+|++++ |++++|++|.++
T Consensus 332 ~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 332 CGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 999999999999999999999999997 699999998654
No 63
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=3.7e-29 Score=277.72 Aligned_cols=273 Identities=21% Similarity=0.277 Sum_probs=212.1
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCC-hhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHH
Q 003552 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (811)
Q Consensus 406 ~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s-~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (811)
.++|+||++....... .++......+.+.++|+......... ...|+. .+.. ....++.+|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYEY------VFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhHH------HHhChhhCCEEEEccHH
Confidence 6899999988765443 23444455677888997543222111 011111 1111 11236789999999988
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccccccc
Q 003552 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (811)
Q Consensus 485 ~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (811)
..+...+. + +. ..++.+||||++...+.+...
T Consensus 168 ~~~~l~~~---~----------------~~---~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQ---F----------------GN---YNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHH---h----------------CC---CCceEEEcccccChhhcccch--------------------------
Confidence 76532221 1 11 234889999999877655320
Q ss_pred CCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003552 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (811)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (811)
....+..++++||+.+.||++.+++++.++.+..++++|+|+|.|.. ...+..+++++++.++|.
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 02456789999999999999999999999998889999999999976 456777888999999999
Q ss_pred EeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CcccccccCCcEEEECCCCHHHHHH
Q 003552 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAE 723 (811)
Q Consensus 645 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G-G~~EiI~dg~~G~li~p~D~e~lA~ 723 (811)
|.|+. .++.++++. +|++|.||.+|+||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99942 357788885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003552 724 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 763 (811)
Q Consensus 724 aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~l 763 (811)
+|..++ +|++.|+++++++++.+ ++|||+.++++|
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 996655 89999999999999995 899999998764
No 64
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.2e-29 Score=282.47 Aligned_cols=437 Identities=16% Similarity=0.178 Sum_probs=290.7
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecC
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~ 358 (811)
|||+.+|.-..| .-++||....+- .|.+.|++.|++|. |+.+.++ .....+....+.+..
T Consensus 1 M~Il~v~~E~~p-------~vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~-~~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFP-------FVKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYP-KVQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecC-------ccccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCch-hhhhhhccccceeeE
Confidence 788888876664 357899888888 66778899999999 9988877 322222222111111
Q ss_pred c-------cCeEEEEecCccc-cc--ccc--cccccc--Cchhh---HH---HHHHHHHHHHHHHcC--CCceEEEEcCC
Q 003552 359 T-------EHTHILRVPFRSE-KG--ILR--QWISRF--DVWPY---LE---TFTEDVGSEITAELQ--GFPDFIIGNYS 416 (811)
Q Consensus 359 ~-------~~v~Ilrvp~~~~-~~--~~~--~~isr~--~i~~~---l~---~f~~~~~~~i~~~~~--~~PDlIh~h~~ 416 (811)
. ....+........ -+ ++. ..-+|. ..+.+ .. .|...+... ..... .+|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~-~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAEL-APLGLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHH-hhhcCCCCCCCEEEeecH
Confidence 0 1111111111000 00 111 111121 11111 12 233333322 22222 37999999999
Q ss_pred CchHHHHHHHHH----cCCcEEEEecCCccccCCC-ChhhHhhhhh-hhh-----hhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 417 DGNLVASLLAYK----MGITQCTIAHALEKTKYPD-SDIYWKKFDE-KYH-----FSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 417 ~~~lva~lla~~----lgvp~v~t~H~l~~~k~~~-s~~~~~~~~~-~y~-----f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
..+++..+++.. ..+|.|+|+|++..+.... .-..+..+.. .|+ +..+..-.+..+..||.|.|+|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999998884 4799999999986654332 1111111111 111 1122344566788999999999987
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccC
Q 003552 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (811)
+.+.... .|. ..+.++. .....++.-|-||+|.+.+.|.++......--.+.......+.....+++|
T Consensus 220 a~Ei~t~--~~g----~gl~g~l------~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g 287 (487)
T COG0297 220 AGEIYTP--EYG----EGLEGLL------SWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG 287 (487)
T ss_pred HHhhccc--ccc----ccchhhh------hhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC
Confidence 7643311 110 0111111 111457889999999999999776432110000111113334556667788
Q ss_pred CCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003552 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (811)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (811)
+..+.+.|++.++|||+.+||++.+++++..+.+.. ++||+.|.|.. .....+..+++++.. ++..
T Consensus 288 L~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~ 353 (487)
T COG0297 288 LDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLV 353 (487)
T ss_pred CCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEE
Confidence 866678899999999999999999999999998754 99999999933 556778888888754 4444
Q ss_pred eccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCccccccc--------CCcEEEECCCC
Q 003552 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--------GASGFHIDPYH 717 (811)
Q Consensus 646 lG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~d--------g~~G~li~p~D 717 (811)
.- ..+ ..+++.+...+|++++||++|+||++-++||..|+++|++.+||.+|.|.+ ..+||++.+.+
T Consensus 354 ~i----~~~-~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~ 428 (487)
T COG0297 354 VI----GYD-EPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN 428 (487)
T ss_pred Ee----eec-HHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC
Confidence 33 233 345555544699999999999999999999999999999999999999875 57999999999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 718 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
+++++.+|.+++.-....+..|+.+..++.. ..|+|+..+++|.++|+..
T Consensus 429 ~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 429 PDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 9999999999986555566669999998887 6899999999999999865
No 65
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=1.9e-29 Score=277.99 Aligned_cols=264 Identities=20% Similarity=0.258 Sum_probs=191.2
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChh------hHhhhhhhhhhhhhhhHHHHHHhhCCEE
Q 003552 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDI------YWKKFDEKYHFSCQFTADLIAMNNADFI 478 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~------~~~~~~~~y~f~~~~~~e~~a~~~AD~I 478 (811)
..++|+||++...... .+.+..++|.+..+|+.....+...+. .+......+.+......+..+++++|.|
T Consensus 81 ~~~~D~v~~~~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAVAK---GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHHhc---cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 4589999987643222 222556789898989742211110000 0000000000011112355678999999
Q ss_pred EecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcc
Q 003552 479 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558 (811)
Q Consensus 479 It~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~ 558 (811)
+++|....+...+ + +..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~----~--------------------~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKK----Y--------------------YGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHH----H--------------------hCCCcEEECCCCCHhhcCcCC---------------------
Confidence 9999987652211 1 133567999999987765421
Q ss_pred ccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003552 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (811)
Q Consensus 559 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 638 (811)
..++.++++||+.+.||++.+++|+.++. ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457999999999999999999998873 78999999876 333333 4
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCH
Q 003552 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (811)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~ 718 (811)
..++|.|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568999999 7788999999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003552 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 763 (811)
Q Consensus 719 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~l 763 (811)
++++++|..++ +|++ .+.+++++++ ++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 99999996655 6774 2344455555 679999998875
No 66
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=5.9e-28 Score=277.78 Aligned_cols=275 Identities=10% Similarity=0.106 Sum_probs=195.2
Q ss_pred CCCceEEEEcCCCc-hHH--HHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEec
Q 003552 405 QGFPDFIIGNYSDG-NLV--ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (811)
Q Consensus 405 ~~~PDlIh~h~~~~-~lv--a~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (811)
..+|||||.+.+.. ++. |..+|++++ |+|.++|+............+ +. .+..+.......--+||.|+++
T Consensus 432 ~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~~g~--L~---~~llk~l~~~v~r~hcD~VIaP 505 (794)
T PLN02501 432 SKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGA--LQ---AFFVKHINNWVTRAYCHKVLRL 505 (794)
T ss_pred ccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhcchh--HH---HHHHHHHHHHHHHhhCCEEEcC
Confidence 35899999998764 666 888999999 999999986432111000000 00 0000000000111128999999
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccc
Q 003552 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQND 561 (811)
Q Consensus 482 S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~ 561 (811)
|..... . + ...+.. .||||++.|.|......+
T Consensus 506 S~atq~-L---------------~------------~~vI~n-VnGVDte~F~P~~r~~~~------------------- 537 (794)
T PLN02501 506 SAATQD-L---------------P------------KSVICN-VHGVNPKFLKIGEKVAEE------------------- 537 (794)
T ss_pred CHHHHH-h---------------c------------ccceee-cccccccccCCcchhHHH-------------------
Confidence 965432 0 0 111112 269999999987553322
Q ss_pred cccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC
Q 003552 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG 641 (811)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~ 641 (811)
..+|. +...+.++|+|||.+.||++.|++|++.+.+..++++|+|+|+|+. .+.+++++.++++
T Consensus 538 r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------reeLe~la~eLgL-- 601 (794)
T PLN02501 538 RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHEVQRAAKRLDL-- 601 (794)
T ss_pred HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHHHHHHHHHcCC--
Confidence 11333 2233458999999999999999999999887778999999999998 6788899999887
Q ss_pred cEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHH
Q 003552 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQA 721 (811)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~l 721 (811)
+|.|+|.+. +...+|+ ++|+||+||.+|+||++++||||||+|||+|+.||.. ++.++.+|+++ +|++++
T Consensus 602 ~V~FLG~~d------d~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e-~V~~g~nGll~--~D~Eaf 671 (794)
T PLN02501 602 NLNFLKGRD------HADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNE-FFRSFPNCLTY--KTSEDF 671 (794)
T ss_pred EEEecCCCC------CHHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCc-eEeecCCeEec--CCHHHH
Confidence 499998432 2335677 4999999999999999999999999999999999864 47778888865 689999
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 722 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 722 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
+++|.+++ .|+..+..+.+ ...|||+..++++++..+.
T Consensus 672 AeAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 672 VAKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 99997766 56654332221 3489999999999997653
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.97 E-value=9.3e-29 Score=272.37 Aligned_cols=258 Identities=13% Similarity=0.109 Sum_probs=188.0
Q ss_pred EcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHH-HhhCCEEEecCHHHHhhccc
Q 003552 413 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA-MNNADFIITSTYQEIAGTKN 491 (811)
Q Consensus 413 ~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~~~~~~~k~ 491 (811)
.|+....+..+...++.|+|+|+++|+... +. . ..+... .+.+|.||++|....+...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~-------l~-----------~--~~~~~~~~~~ad~ii~~S~~~~~~l~- 110 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA-------IS-----------H--TALYFFRNQPVDEIVVPSQWSKNAFY- 110 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech-------hh-----------H--HHHHHHhhccCCEEEECCHHHHHHHH-
Confidence 444333444555556678999999997211 00 0 112234 5789999999988765211
Q ss_pred cccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCC
Q 003552 492 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 571 (811)
Q Consensus 492 ~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~ 571 (811)
..|++. ..++.+||||+|.+.|.|.... ..+
T Consensus 111 -------------------~~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 111 -------------------TSGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred -------------------HcCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 113321 3589999999999887653210 124
Q ss_pred CCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003552 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (811)
Q Consensus 572 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (811)
+.+++++|++.+.||++.|++|++++.+..++++|+++|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4577788899999999999999999988778999999997654 1111 12222 233
Q ss_pred cCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECC----------------
Q 003552 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP---------------- 715 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p---------------- 715 (811)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 5678999999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHhhcCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 716 ---YHPDQAAELMADFFGKCKEN--PSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 716 ---~D~e~lA~aI~~~l~~l~~d--p~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
.|.+++++++.+.+ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 27788888886655 44 24444444445555569999999999999999765
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=4e-27 Score=268.84 Aligned_cols=333 Identities=16% Similarity=0.163 Sum_probs=206.8
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCccccCCCC---hhh-------HhhhhhhhhhhhhhhHHHHHHh
Q 003552 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDS---DIY-------WKKFDEKYHFSCQFTADLIAMN 473 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lva~lla-~~lgvp~v~t~H~l~~~k~~~s---~~~-------~~~~~~~y~f~~~~~~e~~a~~ 473 (811)
..++||+|+|.|..+..+..++ +..++|.|+|.|+.+..++... +++ +...........+...|..+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999998888887 4578999999999877664211 122 1111112222334456888999
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhh
Q 003552 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 553 (811)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~ 553 (811)
.||.+||+|.....+++... |. ++++ |||||+|.+.|.+..+..+....-..+|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll-------------------~~--~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLL-------------------KR--KPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHh-------------------CC--CCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 99999999998876443221 22 2445 9999999999977654322111111222221
Q ss_pred ccCccccccccCCCCCCCCCEEEE-EeccCc-cCCHHHHHHHHHHhhcc----CCC---eEEEEEeCcCCCCCCcchHH-
Q 003552 554 LFDPEQNDEHVGTLSDRSKPIVFS-MARLDH-VKNMTGLVECYGKNSQL----REL---VNLVVVAGYIDVNKSKDREE- 623 (811)
Q Consensus 554 l~~~~~~~~~~g~l~~~~k~iIl~-vGRL~~-~Kgi~~LleA~~~l~~~----~~~---v~LVIVG~g~~~~~~~d~e~- 623 (811)
. ....+.++++ ++++++++| +||++. .||++.+++|++++... ..+ +-|+|+-.+.. +.+.+.
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 1112344565 667788777 799998 99999999999998751 222 34444433311 111100
Q ss_pred --HHHH-------------------------------------------------------------------HHHHHHH
Q 003552 624 --IAEI-------------------------------------------------------------------EKMHELM 634 (811)
Q Consensus 624 --~~~~-------------------------------------------------------------------~~l~~li 634 (811)
++.. +.+-..+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 0000 0111122
Q ss_pred HHcCCC----Cc--EEEecc---ccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----c
Q 003552 635 KTYKLD----GQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----A 701 (811)
Q Consensus 635 ~~~~L~----~~--V~flG~---~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~----~ 701 (811)
.+.+|. ++ |.|.+. -+|.+-..+.+.+++ .+|+||+||++|+||++++|||+||+|||+|+.+|+ .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 222332 22 445441 122333445667777 499999999999999999999999999999999998 5
Q ss_pred cccccC-CcEEEECCCCH---HHHHHHHHHHHHhhcCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 003552 702 EIIEHG-ASGFHIDPYHP---DQAAELMADFFGKCKENPSHWKKISDGGL-KRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 702 EiI~dg-~~G~li~p~D~---e~lA~aI~~~l~~l~~dp~~~~~ms~~a~-~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
|++.++ ..|+.+.+.+. .+.++.|.+++..+.+. +.++.+.++++ ++..+.|+|+..++.|.+.|+.
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 666555 36777763222 22333333333444444 46666666655 3444899999999999998763
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=1.3e-25 Score=248.95 Aligned_cols=343 Identities=13% Similarity=0.114 Sum_probs=233.8
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecC
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~ 358 (811)
|||++++. | .||.+.... +|++.|+++||+|+ ++|..... . ....+.
T Consensus 2 ~~i~i~~~-g------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGG-G------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVPK--- 48 (357)
T ss_pred cEEEEEcC-c------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhcccc---
Confidence 89888763 2 378777777 77888899999999 88764210 0 001111
Q ss_pred ccCeEEEEecCccccccccccccccC-chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003552 359 TEHTHILRVPFRSEKGILRQWISRFD-VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (811)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~-i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~ 437 (811)
.++.+.+++.....+. ...++.. .+.++ .....+.+.+. ..+|||||+|.+.+++.+.++++..++|+|++.
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~-~~~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLL-KGVLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHH-HHHHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 2567777765432110 0000000 11111 11112222222 348999999998777888888888999999876
Q ss_pred cCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003552 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (811)
Q Consensus 438 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~ 517 (811)
|+.... ...++.++.+|.+++++++... . ..
T Consensus 122 ~~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~---------------------~------~~ 152 (357)
T PRK00726 122 QNAVPG----------------------LANKLLARFAKKVATAFPGAFP---------------------E------FF 152 (357)
T ss_pred CCCCcc----------------------HHHHHHHHHhchheECchhhhh---------------------c------cC
Confidence 643110 0123466789999998864311 0 12
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHH-HHHHH
Q 003552 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV-ECYGK 596 (811)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Ll-eA~~~ 596 (811)
..++.++|||+|.+.+.+.... .+++. ++++++|+++|+..+.|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 6789999999998766542211 11333 45677889999998888876555 99988
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCC
Q 003552 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (811)
Q Consensus 597 l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E 676 (811)
+.+. + ..++++|+|.. +.+.+..+ +++. |.|.|++ +++..+++. +|++|.++-
T Consensus 209 ~~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g-- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG-- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC--
Confidence 8653 3 56778888854 33444445 6664 9999943 467888885 999998762
Q ss_pred CCCHHHHHHHHcCCCEEEcCCCC--------cccccccCCcEEEECCCC--HHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003552 677 AFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGG 746 (811)
Q Consensus 677 ~fGltvlEAMa~GlPVIAT~~GG--------~~EiI~dg~~G~li~p~D--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 746 (811)
+.+++|||+||+|+|++..++ ..+.+.+..+|++++++| +++++++|.++ ++|++.+++|++++
T Consensus 262 --~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~l----l~~~~~~~~~~~~~ 335 (357)
T PRK00726 262 --ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLEL----LSDPERLEAMAEAA 335 (357)
T ss_pred --HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHH----HcCHHHHHHHHHHH
Confidence 689999999999999987653 235677778999999888 99999999554 48999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHH
Q 003552 747 LKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 747 ~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
++++ +.++-+.+++.++++.+
T Consensus 336 ~~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 336 RALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred HhcC-CcCHHHHHHHHHHHHhh
Confidence 9986 88999999999988754
No 70
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=9.9e-26 Score=259.00 Aligned_cols=312 Identities=13% Similarity=0.066 Sum_probs=213.8
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 407 ~PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
..|+|+.|+....+++..+.++. ..|+++..|..++ .+.+ |..+ ..-..-...|-.+|.|.+.|...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP----~~e~-~~~l-------p~~~~ll~~~l~~D~igF~t~~~ 198 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFP----SSEI-FRCL-------PWREELLRGLLGADLIGFQTERY 198 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCC----ChHH-HhhC-------CChHHHHHHHhcCCEEEECCHHH
Confidence 57999999998877777776543 5899999997653 2222 2111 11111234677799999999765
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccC
Q 003552 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (811)
....-+........ ..+. .......|. ..++.++|||||.+.|.+.......... + ++..+
T Consensus 199 ~~~Fl~~~~~~l~~-~~~~-~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~~----~----------~~~~~ 259 (460)
T cd03788 199 ARNFLSCCSRLLGL-EVTD-DGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQER----A----------AELRE 259 (460)
T ss_pred HHHHHHHHHHHcCC-cccC-CceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHHH----H----------HHHHH
Confidence 43211111000000 0000 001111121 3478999999999988754221110000 0 01122
Q ss_pred CCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003552 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (811)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~- 640 (811)
. .+++++|+++||+++.||++.+++|+.++.+.+|+ ++|+++|++.. ...++..+..+++++++++.+..
T Consensus 260 ~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~---g~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 260 R--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSR---TDVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred h--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCC---cCcHHHHHHHHHHHHHHHHHHhcc
Confidence 2 35788999999999999999999999998876665 78999986532 11233445566667776664321
Q ss_pred -----CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCC----EEEcCCCCcccccccCCcEE
Q 003552 641 -----GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIEHGASGF 711 (811)
Q Consensus 641 -----~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlP----VIAT~~GG~~EiI~dg~~G~ 711 (811)
..|++++ +.++.+++..+|+. +|+||+||..||||++++|||+||+| ||+|+.+|..+. +.+|+
T Consensus 335 g~~~~~~v~~~~---g~v~~~el~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~ 407 (460)
T cd03788 335 GTLDWTPVRYLY---RSLPREELAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGAL 407 (460)
T ss_pred CCCCceeEEEEe---CCCCHHHHHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCE
Confidence 2355553 26788999999995 99999999999999999999999999 999998888776 56899
Q ss_pred EECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003552 712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (811)
Q Consensus 712 li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~ 765 (811)
+++|+|++++|++|.++++ .+++.++.+++++++++ ++|||+..+++++.
T Consensus 408 lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 408 LVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred EECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 9999999999999977652 35578889999999998 78999999999875
No 71
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=8.3e-25 Score=239.87 Aligned_cols=244 Identities=12% Similarity=0.116 Sum_probs=178.8
Q ss_pred cCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccce
Q 003552 429 MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLY 508 (811)
Q Consensus 429 lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly 508 (811)
-+.|+++|+|+.... ..|+ ..|.+.+.+|++|....+...
T Consensus 69 ~~~~~~tt~~g~~~~-------------~~y~---------~~m~~~~~vIavS~~t~~~L~------------------ 108 (335)
T PHA01633 69 GKKYFYTTCDGIPNI-------------EIVN---------KYLLQDVKFIPNSKFSAENLQ------------------ 108 (335)
T ss_pred CCCceEEeeCCcCch-------------HHHH---------HHHhcCCEEEeCCHHHHHHHH------------------
Confidence 357888999975321 1122 346677899999987665211
Q ss_pred eeeccCCCCCCcEEEecCCCCCCCCCCCchH-HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCH
Q 003552 509 RVVHGIDVFDPKFNIVSPGADMDIYFPYSEK-QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNM 587 (811)
Q Consensus 509 ~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~-~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi 587 (811)
..|++ .+ + +|+||+|.+.|.|.... .+.. +.++.. .++.++++++||++++||+
T Consensus 109 --~~G~~--~~-i-~I~~GVD~~~f~p~~~~~~~~r------------------~~~~~~-~~~~~~i~~vGRl~~~KG~ 163 (335)
T PHA01633 109 --EVGLQ--VD-L-PVFHGINFKIVENAEKLVPQLK------------------QKLDKD-FPDTIKFGIVSGLTKRKNM 163 (335)
T ss_pred --HhCCC--Cc-e-eeeCCCChhhcCccchhhHHHH------------------HHhCcC-CCCCeEEEEEeCCccccCH
Confidence 12443 22 3 47899999998875421 1111 112221 1366789999999999999
Q ss_pred HHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHH
Q 003552 588 TGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIA 663 (811)
Q Consensus 588 ~~LleA~~~l~~~~~~----v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia 663 (811)
+.|++|++++.+..++ ++|+++|++ ..+++++.++|+|+|... .++.+++.++|+
T Consensus 164 ~~LI~A~~~L~~~~p~~~~~i~l~ivG~~--------------------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~ 222 (335)
T PHA01633 164 DLMLQVFNELNTKYPDIAKKIHFFVISHK--------------------QFTQLEVPANVHFVAEFG-HNSREYIFAFYG 222 (335)
T ss_pred HHHHHHHHHHHHhCCCccccEEEEEEcHH--------------------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHH
Confidence 9999999999876554 578888732 124567888999996332 456789999999
Q ss_pred ccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccc----------------c--CCcEEEECCCCHHHHHHHH
Q 003552 664 DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE----------------H--GASGFHIDPYHPDQAAELM 725 (811)
Q Consensus 664 ~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~----------------d--g~~G~li~p~D~e~lA~aI 725 (811)
. +|+||+||.+|+||++++|||+||+|||+|+.||..|++. + ...||.+++.|++++|++|
T Consensus 223 ~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai 301 (335)
T PHA01633 223 A-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAI 301 (335)
T ss_pred h-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHH
Confidence 5 9999999999999999999999999999999999888743 1 2247889999999999999
Q ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003552 726 ADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (811)
Q Consensus 726 ~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~ 765 (811)
..+++. .|++.+ +.++++++ ++|+|+.++++|++
T Consensus 302 ~~~~~~--~~~~~~---~~~~~~~a-~~f~~~~~~~~~~~ 335 (335)
T PHA01633 302 ILAFEL--QDREER---SMKLKELA-KKYDIRNLYTRFLE 335 (335)
T ss_pred HHHHhc--cChhhh---hHHHHHHH-HhcCHHHHHHHhhC
Confidence 877632 454433 67778776 99999999998863
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.93 E-value=4.9e-24 Score=234.72 Aligned_cols=322 Identities=13% Similarity=0.123 Sum_probs=221.6
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccc
Q 003552 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (811)
Q Consensus 301 ~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~i 380 (811)
+||.+.++. .|++.|.++||+|+ |+|...... .+.. ...++++.++|+....+
T Consensus 9 ~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~------ 61 (350)
T cd03785 9 TGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR------ 61 (350)
T ss_pred chhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC------
Confidence 578888777 77888899999999 888753211 0011 11246777777643211
Q ss_pred cccCchhhHH------HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhh
Q 003552 381 SRFDVWPYLE------TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKK 454 (811)
Q Consensus 381 sr~~i~~~l~------~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~ 454 (811)
...+..+. .....+.+.+. +.+||+||+|....++.+.++++..++|+++..|+... .
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~-----------~ 125 (350)
T cd03785 62 --KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP-----------G 125 (350)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------c
Confidence 11111111 11122233333 34899999998777777788888999999876554211 0
Q ss_pred hhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCC
Q 003552 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (811)
Q Consensus 455 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~ 534 (811)
. ..+..+..+|.|++.|+...+ + + .+.++.+++||+|.+.+.
T Consensus 126 ~-----------~~~~~~~~~~~vi~~s~~~~~--------------------~-----~--~~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 L-----------ANRLLARFADRVALSFPETAK--------------------Y-----F--PKDKAVVTGNPVREEILA 167 (350)
T ss_pred H-----------HHHHHHHhhCEEEEcchhhhh--------------------c-----C--CCCcEEEECCCCchHHhh
Confidence 0 123456679999999987644 0 1 157899999999987765
Q ss_pred CCchHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHH-HHHHHHHhhccCCCeEE-EEEeCc
Q 003552 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNL-VVVAGY 612 (811)
Q Consensus 535 p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~-LleA~~~l~~~~~~v~L-VIVG~g 612 (811)
+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++++ +++|.+
T Consensus 168 ~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4321 122444 567778888888777777754 5588888863 45664 466776
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCE
Q 003552 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (811)
Q Consensus 613 ~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPV 692 (811)
. .+++++.++++ .++|+|.|++ .++..+|+. +|++|.++- +++++|||+||+|+
T Consensus 222 -~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 222 -D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred -c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCE
Confidence 4 45666777665 4789999943 568888885 999998762 68999999999999
Q ss_pred EEcCCCC--------cccccccCCcEEEECCC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003552 693 FATCHGG--------PAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYS 760 (811)
Q Consensus 693 IAT~~GG--------~~EiI~dg~~G~li~p~--D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a 760 (811)
|+++.++ +.+.+.++.+|++++++ |+++++++|.+++ +|++.+++|++++++++ +.+.-++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~ 348 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA-RPDAAERIA 348 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9987654 35667777899999987 8999999996655 79999999999999887 566666554
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=5.6e-24 Score=234.09 Aligned_cols=315 Identities=15% Similarity=0.143 Sum_probs=207.2
Q ss_pred HHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccccccCchhhH---HHHHH
Q 003552 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTE 394 (811)
Q Consensus 318 ~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l---~~f~~ 394 (811)
.|+++|.++||+|+ ++|+...... .. ....++.+.+++.....+ ......+... .....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~~------~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLEK------RL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcchh------cc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67888999999999 8886321100 00 011246777776643211 0011111111 11222
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhh
Q 003552 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (811)
Q Consensus 395 ~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 474 (811)
.+.+.+. +.+||+||+|....++.+.++++..++|+|...|+... . ..+++..+.
T Consensus 81 ~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~------~----------------~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP------G----------------LTNKLLSRF 135 (348)
T ss_pred HHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc------c----------------HHHHHHHHH
Confidence 2333333 45899999998777777777888899999754332110 0 012345678
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhc
Q 003552 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (811)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l 554 (811)
+|.+++.|+.+.+ | -+..+|+||+|...+.+....
T Consensus 136 ~d~ii~~~~~~~~--------~----------------------~~~~~i~n~v~~~~~~~~~~~--------------- 170 (348)
T TIGR01133 136 AKKVLISFPGAKD--------H----------------------FEAVLVGNPVRQEIRSLPVPR--------------- 170 (348)
T ss_pred hCeeEECchhHhh--------c----------------------CCceEEcCCcCHHHhcccchh---------------
Confidence 9999999987643 0 023689999987665442111
Q ss_pred cCccccccccCCCCCCCCCEEEEEeccCccCCHHH-HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003552 555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (811)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~-LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~l 633 (811)
..+++ ++++++|+++|+....|++.. +++|+.++.+. ++++++++++.. .+.+++.
T Consensus 171 -------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~ 227 (348)
T TIGR01133 171 -------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNV 227 (348)
T ss_pred -------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHH
Confidence 12344 457788999998888888654 55888887652 466655554433 3567777
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC-------ccccccc
Q 003552 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-------PAEIIEH 706 (811)
Q Consensus 634 i~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG-------~~EiI~d 706 (811)
++++++.+.+.|.. .++..+|+. +|++|.++ + |++++|||+||+|+|+++.+| ..+++.+
T Consensus 228 ~~~~~l~~~v~~~~--------~~~~~~l~~-ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 228 YQELGIEAIVTFID--------ENMAAAYAA-ADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HhhCCceEEecCcc--------cCHHHHHHh-CCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 88888765555542 156778884 99999875 2 789999999999999997754 3367888
Q ss_pred CCcEEEECCCC--HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003552 707 GASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 761 (811)
Q Consensus 707 g~~G~li~p~D--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~ 761 (811)
+.+|++++++| +++++++|.+++ +||+.+++|++++++++ +...-+.+++
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 99999999887 999999996554 89999999999998877 4555554443
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=6.9e-24 Score=242.75 Aligned_cols=320 Identities=16% Similarity=0.147 Sum_probs=217.4
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHh
Q 003552 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (811)
Q Consensus 395 ~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 473 (811)
.....+.+.. ..-|+|..|+....+++.++.++. ..++.+..|..++ .++++. .+..-..-...|-
T Consensus 116 ~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP----~~e~f~--------~lp~r~~il~gll 182 (456)
T TIGR02400 116 LFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFP----SSEIYR--------TLPWRRELLEGLL 182 (456)
T ss_pred HHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCC----ChHHHh--------hCCcHHHHHHHHh
Confidence 3333444432 345899999999988888887764 4578888996543 233221 1111122345788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHH---HHHhhhhcch
Q 003552 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (811)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~i 550 (811)
.||.|.+.|+......-.......... ..++ -....|- ..++.++|||||++.|.+..... ++...+
T Consensus 183 ~~dligF~t~~~~~~Fl~~~~~~l~~~--~~~~-~~~~~g~---~~~v~viP~GID~~~f~~~~~~~~~~~~~~~l---- 252 (456)
T TIGR02400 183 AYDLVGFQTYDDARNFLSAVSRELGLE--TLPN-GVESGGR---TVRVGAFPIGIDVDRFAEQAKKPSVQKRIAEL---- 252 (456)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHhCCc--ccCC-ceEECCc---EEEEEEecCcCCHHHHHHHhcChhHHHHHHHH----
Confidence 999999999887764433222110000 0000 0001111 34788999999999987643221 111111
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003552 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (811)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LVIVG~g~~~~~~~d~e~~~~ 626 (811)
++.+ .++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|+... ...+++.+.
T Consensus 253 ----------r~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l 314 (456)
T TIGR02400 253 ----------RESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQL 314 (456)
T ss_pred ----------HHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHH
Confidence 1111 3678999999999999999999999998776664 66888864321 111233334
Q ss_pred HHHHHHHHHHcCC-CCc-----EEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCC----EEEcC
Q 003552 627 IEKMHELMKTYKL-DGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATC 696 (811)
Q Consensus 627 ~~~l~~li~~~~L-~~~-----V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlP----VIAT~ 696 (811)
.+.+++++.+.+. .+. |++++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +|+|+
T Consensus 315 ~~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~ 390 (456)
T TIGR02400 315 RRQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSE 390 (456)
T ss_pred HHHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeC
Confidence 4444444433221 111 44544 2677899999999 499999999999999999999999999 99999
Q ss_pred CCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 697 HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 697 ~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
.+|..+.+. +|++++|.|++++|++|.++++ .+++.++++.+++++++ .+||+...++++++-
T Consensus 391 ~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 391 FAGAAQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred CCCChHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 999888873 7999999999999999987663 47788999999999998 679999999998763
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=6.1e-23 Score=233.39 Aligned_cols=284 Identities=15% Similarity=0.139 Sum_probs=192.3
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHH
Q 003552 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (811)
Q Consensus 407 ~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (811)
+||+||++..+........+++.|+|++++.|.+... +...|+.+ .. ..+..++.+|.|++.|....
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~-------~~--~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKF-------KR--FYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHH-------HH--HHHHHHHhCCEEEECCHHHH
Confidence 8999998855532223334678899998876643211 11111111 11 13356888999999998876
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccCC
Q 003552 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (811)
Q Consensus 487 ~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~ 566 (811)
+... ..|++ .+ +.+++|+ +.+.+.+....... .. .+..++
T Consensus 191 ~~l~--------------------~~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~~--------------~r~~~~- 230 (425)
T PRK05749 191 ERFL--------------------ALGAK--NE-VTVTGNL-KFDIEVPPELAARA-AT--------------LRRQLA- 230 (425)
T ss_pred HHHH--------------------HcCCC--CC-cEecccc-cccCCCChhhHHHH-HH--------------HHHHhc-
Confidence 5211 12333 44 7788874 33333222111110 00 112232
Q ss_pred CCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003552 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (811)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 646 (811)
+++++++++|+. .|+.+.+++|+.++.+..++++|+|+|+|+. ..++++++++++|+.. +.|.
T Consensus 231 ---~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~~-~~~~ 293 (425)
T PRK05749 231 ---PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLSY-VRRS 293 (425)
T ss_pred ---CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCcE-EEcc
Confidence 356788888864 6889999999999887789999999999876 1257888899988853 5555
Q ss_pred ccccCc--------CChHHHHHHHHccccEE-EecCCCCCCCHHHHHHHHcCCCEEEcCC-CCcccccccC-CcEEEECC
Q 003552 647 AAQTNR--------ARNGELYRYIADTKGAF-VQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG-ASGFHIDP 715 (811)
Q Consensus 647 G~~~~~--------v~~~el~~~ia~aadvf-V~PS~~E~fGltvlEAMa~GlPVIAT~~-GG~~EiI~dg-~~G~li~p 715 (811)
|..... -..+++..+|+. +|++ +.+|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++++
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 024689999995 9995 5578889999999999999999999864 6677766553 46888889
Q ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 716 ~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
+|+++++++|.+++ +||+.+++|+++|++.+.++ ...++++++++.
T Consensus 373 ~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 373 EDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 99999999996554 89999999999999999665 355566666655
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.90 E-value=1.4e-22 Score=226.96 Aligned_cols=262 Identities=11% Similarity=0.070 Sum_probs=178.2
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 406 ~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
.+||+||++++..++.....++..++|+++++++....+ .+..+.+|.++++|...
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------------------------~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------------------------IWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------------------------ccccCCCCEEEECCHHH
Confidence 489999998766555444444456799886665432110 02355899999999876
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccC
Q 003552 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (811)
.+.. ...|++ .+|+.++++.++.....+..... .++++|
T Consensus 159 ~~~l--------------------~~~gi~--~~ki~v~G~p~~~~f~~~~~~~~-------------------~~~~~~ 197 (380)
T PRK13609 159 KKVL--------------------VDIGVP--PEQVVETGIPIRSSFELKINPDI-------------------IYNKYQ 197 (380)
T ss_pred HHHH--------------------HHcCCC--hhHEEEECcccChHHcCcCCHHH-------------------HHHHcC
Confidence 5421 112443 67888876655432221221111 113356
Q ss_pred CCCCCCCC-EEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003552 566 TLSDRSKP-IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (811)
Q Consensus 566 ~l~~~~k~-iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (811)
+ +++++ ++++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|+
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcEE
Confidence 5 44555 455668888899999999988643 6789988876422 12456777776654 6899
Q ss_pred EeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC-CCCc----ccccccCCcEEEECCCCHH
Q 003552 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGP----AEIIEHGASGFHIDPYHPD 719 (811)
Q Consensus 645 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~-~GG~----~EiI~dg~~G~li~p~D~e 719 (811)
|+|++. ++..+|+. +|++|. ++.|++++|||+||+|+|+++ .+|. .+++.+ +|+.+.+.|++
T Consensus 260 ~~g~~~------~~~~l~~~-aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFRV-TSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHHh-ccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999532 46778884 999885 566999999999999999985 5552 234433 35555567999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 720 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
+++++|.+++ +||+.+++|++++++.. +.++++.+++.+++++.
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 327 EVFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENH 370 (380)
T ss_pred HHHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhh
Confidence 9999996554 89999999999998766 67899999999988764
No 77
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.90 E-value=4.2e-22 Score=241.27 Aligned_cols=323 Identities=13% Similarity=0.127 Sum_probs=216.1
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHh
Q 003552 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (811)
Q Consensus 395 ~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 473 (811)
.....+.... ..-|+|..|+....++...+.++. ..++.+..|..+++ +.++. .+..-..-+..|-
T Consensus 136 ~FA~~i~~~~-~~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs----~e~fr--------~lp~r~~il~gll 202 (797)
T PLN03063 136 MFLDVVKENY-EEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPS----SEIYK--------TLPSRSELLRAVL 202 (797)
T ss_pred HHHHHHHHhc-CCCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCC----HHHHh--------hCCCHHHHHHHHh
Confidence 3333444432 234899999999888888777754 57888999976542 22221 1111122345788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchH---HHHHhhhhcch
Q 003552 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK---QKRLTALHGSI 550 (811)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~i 550 (811)
.||.|-+.|.......-........ ...+..++ ...|- ..++.++|||||.+.|.+.... ..+...+
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~l~-~~~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~~~~l---- 272 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRILG-VEGTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQHMKEL---- 272 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHHhC-ccccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHHHHHH----
Confidence 9999999998765532221111100 00000000 11121 3478899999999888653221 1111110
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCe----EEEEEeCcCCCCCCcchHHHHH
Q 003552 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIAE 626 (811)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v----~LVIVG~g~~~~~~~d~e~~~~ 626 (811)
++ . ..++++|+++||+++.||+..+++|+.++.+.+|++ .|+.+++... ...++
T Consensus 273 ----------r~---~--~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr---~~~~~---- 330 (797)
T PLN03063 273 ----------KR---F--FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR---NDVPE---- 330 (797)
T ss_pred ----------HH---h--cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC---CchHH----
Confidence 01 1 235789999999999999999999999988777765 4555543211 11122
Q ss_pred HHHHHHHHHHcC--CC---CcEEEecc--ccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCC----EEEc
Q 003552 627 IEKMHELMKTYK--LD---GQFRWIAA--QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFAT 695 (811)
Q Consensus 627 ~~~l~~li~~~~--L~---~~V~flG~--~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlP----VIAT 695 (811)
.+++++.++++. ++ +.+.|.+. ....++.+++..+|+ +||+||+||.+||||++++||||||+| +|+|
T Consensus 331 y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlS 409 (797)
T PLN03063 331 YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLS 409 (797)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEee
Confidence 334444444442 22 22333331 113678899999999 599999999999999999999999999 9999
Q ss_pred CCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 696 ~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
..+|..+.+ +.+|++++|.|++++|++|.++++ .+++.+++..+++++++ .++||...++.+++-++.
T Consensus 410 e~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 410 EFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELND 477 (797)
T ss_pred CCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHH
Confidence 999999876 557999999999999999987762 37888888899999998 899999999998886643
No 78
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=2.9e-23 Score=205.57 Aligned_cols=160 Identities=28% Similarity=0.482 Sum_probs=144.0
Q ss_pred CCCCCEEEEEeccCccCCHHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003552 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (811)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~-~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (811)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+.. ...+...++.+++.++|+|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 57889999999999999999999999999763 68999999996655 677899999999999999999
Q ss_pred cccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHH
Q 003552 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (811)
Q Consensus 648 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~ 727 (811)
.++..++..++.. +|++|+||..|+||++++|||+||+|||+|+.|++.|++.++.+|++++++|+++++++|.+
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 6667899999996 99999999999999999999999999999999999999999999999999999999999966
Q ss_pred HHHhhcCCHHHHHHHHHHHHHH
Q 003552 728 FFGKCKENPSHWKKISDGGLKR 749 (811)
Q Consensus 728 ~l~~l~~dp~~~~~ms~~a~~~ 749 (811)
++ +|++.++.|+++|++|
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 55 7999999999999976
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.88 E-value=2.5e-20 Score=208.62 Aligned_cols=267 Identities=12% Similarity=0.083 Sum_probs=176.9
Q ss_pred cCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCH
Q 003552 404 LQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (811)
Q Consensus 404 ~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (811)
++.+.+|++++.+....++ +...+.++|+.+++..... ...... . ...+...++.||.|+|+|.
T Consensus 99 ~~~~~~i~~~~~P~~~~~~---~~~~~~~~Vyd~~D~~~~~-~~~~~~---~---------~~~e~~~~~~ad~vi~~S~ 162 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVA---ALLQASLVVYDCVDDLSAF-PGGPPE---L---------LEAERRLLKRADLVFTTSP 162 (373)
T ss_pred cCCCCcEEEEeCccHHHHH---hhcCCCeEEEEcccchhcc-CCCCHH---H---------HHHHHHHHHhCCEEEECCH
Confidence 3556666676654443333 3366788999988754322 111000 0 0336678999999999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccc
Q 003552 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (811)
Q Consensus 484 ~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 563 (811)
...+.. .+ . .+++.+||||+|.+.|.+........ +.
T Consensus 163 ~l~~~~----~~------------------~---~~~i~~i~ngvd~~~f~~~~~~~~~~-----------------~~- 199 (373)
T cd04950 163 SLYEAK----RR------------------L---NPNVVLVPNGVDYEHFAAARDPPPPP-----------------AD- 199 (373)
T ss_pred HHHHHH----hh------------------C---CCCEEEcccccCHHHhhcccccCCCh-----------------hH-
Confidence 765411 11 1 36889999999999887643211000 00
Q ss_pred cCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003552 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (811)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 643 (811)
....++++|+|+|++.+.++++.+.++.. ..++++|+++|++... ..... ....++|
T Consensus 200 ---~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~~----~~~~~nV 256 (373)
T cd04950 200 ---LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPSA----LLRLPNV 256 (373)
T ss_pred ---HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChhH----hccCCCE
Confidence 01346789999999999888876655443 3478999999998320 00111 1124689
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEecCCC-----CCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCH
Q 003552 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (811)
Q Consensus 644 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~-----E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~ 718 (811)
+|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. +..+..+++ .++|+
T Consensus 257 ~~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~ 327 (373)
T cd04950 257 HYLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDP 327 (373)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCH
Confidence 9999 7888999999995 9999999863 4789999999999999999986544 444443444 46799
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 719 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
++++++|.+++.. .+++..+ .+.+ +.+.|||+..++++++..+
T Consensus 328 ~~~~~ai~~~l~~--~~~~~~~----~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 328 EEFVAAIEKALLE--DGPARER----RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHHHhc--CCchHHH----HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 9999999776521 2222222 2222 4588999999999986543
No 80
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.88 E-value=4.7e-21 Score=231.79 Aligned_cols=310 Identities=15% Similarity=0.121 Sum_probs=210.2
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 407 ~PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
.-|+|..|+....+++..+.++. ..++.+..|..++. +.+... +..-..-...|-.+|.|-..|...
T Consensus 133 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~----~~~f~~--------lp~~~~ll~~ll~~Dligf~t~~~ 200 (726)
T PRK14501 133 PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS----FEVFRL--------LPWREEILEGLLGADLIGFHTYDY 200 (726)
T ss_pred CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCC----hHHHhh--------CCChHHHHHHHhcCCeEEeCCHHH
Confidence 34899999999888888886653 57888899976542 232221 111122345788999999999875
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHH---HHHhhhhcchhhhccCcccccc
Q 003552 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSIEQLLFDPEQNDE 562 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~i~~~l~~~~~~~~ 562 (811)
.....+......... +-.. .....|- ..++.++|||||.+.|.+..... .+...+ ++
T Consensus 201 ~r~Fl~~~~~~l~~~--~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~l--------------r~ 260 (726)
T PRK14501 201 VRHFLSSVLRVLGYE--TELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRL--------------RQ 260 (726)
T ss_pred HHHHHHHHHHHcCCc--cCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHHH--------------HH
Confidence 543222111110000 0000 0111121 23688999999999987643211 111110 00
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 638 (811)
. ..++++|+++||+++.||+..+++|+.++.+.+|+ ++|+++|.+.. ..-+++.+..+.+.+++.+.+
T Consensus 261 ---~--~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l~~~~~~~v~~in 332 (726)
T PRK14501 261 ---D--LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEMKREIDELVGRIN 332 (726)
T ss_pred ---H--cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHHHHHHHHHHHHHH
Confidence 0 24677999999999999999999999998776664 78999985422 001233444555555655432
Q ss_pred ----CC---CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHc-----CCCEEEcCCCCccccccc
Q 003552 639 ----LD---GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC-----GLPTFATCHGGPAEIIEH 706 (811)
Q Consensus 639 ----L~---~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~-----GlPVIAT~~GG~~EiI~d 706 (811)
.. .-+.|.| .++.+++..+|+. +|+||+||..||||++++|||+| |.||+++..|+..+++
T Consensus 333 ~~~~~~~~~pv~~~~~----~~~~~~l~~ly~~-aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~-- 405 (726)
T PRK14501 333 GEFGTVDWTPIHYFYR----SLPFEELVALYRA-ADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA-- 405 (726)
T ss_pred hhcCCCCcceEEEEeC----CCCHHHHHHHHHh-ccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC--
Confidence 11 1234555 6789999999995 99999999999999999999999 5577777788888875
Q ss_pred CCcEEEECCCCHHHHHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 707 GASGFHIDPYHPDQAAELMADFFGKCKEN-PSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 707 g~~G~li~p~D~e~lA~aI~~~l~~l~~d-p~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
.|++++|.|++++|++|.+++ ++ ++.+....+++++++ .+|||+.+++++++.|+.-
T Consensus 406 --~~llv~P~d~~~la~ai~~~l----~~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 406 --EALLVNPNDIEGIAAAIKRAL----EMPEEEQRERMQAMQERL-RRYDVHKWASDFLDELREA 463 (726)
T ss_pred --cCeEECCCCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Confidence 489999999999999998776 43 345555567789888 7999999999999887643
No 81
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.87 E-value=1.7e-20 Score=190.29 Aligned_cols=121 Identities=31% Similarity=0.515 Sum_probs=104.2
Q ss_pred EEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChH
Q 003552 577 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (811)
Q Consensus 577 ~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~ 656 (811)
++|++.+.||++.+++++..+.+..++++++++|++.. .......+.+++..++|.++| .++..
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~----~~~~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLG----GLDPE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeC----CCCcH
Confidence 99999999999999999999988788999999999877 344444467788889999999 44334
Q ss_pred HHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEE
Q 003552 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713 (811)
Q Consensus 657 el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li 713 (811)
+....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 444455435999999999999999999999999999999999999999999999874
No 82
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.87 E-value=3e-20 Score=208.80 Aligned_cols=264 Identities=14% Similarity=0.135 Sum_probs=182.2
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHH-----HcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEE
Q 003552 405 QGFPDFIIGNYSDG-NLVASLLAY-----KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFI 478 (811)
Q Consensus 405 ~~~PDlIh~h~~~~-~lva~lla~-----~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~I 478 (811)
+.+||+||++++.. ...+..+++ ..++|++++++++.... .....+.+|.+
T Consensus 98 ~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~ 154 (382)
T PLN02605 98 KYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRC 154 (382)
T ss_pred hcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEE
Confidence 35999999976442 222233332 24789988877642100 01134689999
Q ss_pred EecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcc
Q 003552 479 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558 (811)
Q Consensus 479 It~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~ 558 (811)
+++|....+. ....|++ .+|+.++++++|.+.+.+......
T Consensus 155 ~~~s~~~~~~--------------------l~~~g~~--~~ki~v~g~~v~~~f~~~~~~~~~----------------- 195 (382)
T PLN02605 155 FCPSEEVAKR--------------------ALKRGLE--PSQIRVYGLPIRPSFARAVRPKDE----------------- 195 (382)
T ss_pred EECCHHHHHH--------------------HHHcCCC--HHHEEEECcccCHhhccCCCCHHH-----------------
Confidence 9999876542 1123554 789999999998765543322211
Q ss_pred ccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhc----cCCCeE-EEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003552 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (811)
Q Consensus 559 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~----~~~~v~-LVIVG~g~~~~~~~d~e~~~~~~~l~~l 633 (811)
.++.+|+ ++++++|+++|+....|++..+++++..... ..++.+ ++++|++.. ..+++++.
T Consensus 196 -~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~ 261 (382)
T PLN02605 196 -LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR 261 (382)
T ss_pred -HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh
Confidence 1234676 6788999999999999999999999976531 135565 556665422 12333332
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCC------CCcccccccC
Q 003552 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH------GGPAEIIEHG 707 (811)
Q Consensus 634 i~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~------GG~~EiI~dg 707 (811)
....+|+|+|++. ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+. +.+.++
T Consensus 262 ----~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~ 325 (382)
T PLN02605 262 ----DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDN 325 (382)
T ss_pred ----cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhC
Confidence 2245799999543 5888888 599999865 48999999999999999984 444 444455
Q ss_pred CcEEEECCCCHHHHHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003552 708 ASGFHIDPYHPDQAAELMADFFGKCKEN-PSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (811)
Q Consensus 708 ~~G~li~p~D~e~lA~aI~~~l~~l~~d-p~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly 767 (811)
..|+.+ +|+++++++|.+++ .| ++.+++|++++++++ ...+++.+++.+.++.
T Consensus 326 g~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 326 GFGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELV 379 (382)
T ss_pred Cceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHh
Confidence 567654 79999999997665 66 999999999999987 7788888888887664
No 83
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.86 E-value=1.1e-19 Score=213.24 Aligned_cols=350 Identities=13% Similarity=0.112 Sum_probs=238.7
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH--------------cCCcEEEEecCCccccC---CCChh-----
Q 003552 393 TEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK--------------MGITQCTIAHALEKTKY---PDSDI----- 450 (811)
Q Consensus 393 ~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~--------------lgvp~v~t~H~l~~~k~---~~s~~----- 450 (811)
....++.+ ..+..+||+||+|.|.++++...+.+. ...+.|+|.|++..... +...+
T Consensus 148 ~~a~l~~l-~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~ 226 (601)
T TIGR02094 148 GIGGVRAL-RALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFG 226 (601)
T ss_pred HHHHHHHH-HHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhh
Confidence 33444444 334679999999999998777664321 13668999999865542 21111
Q ss_pred --------hHhhhh---hhhh-hhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003552 451 --------YWKKFD---EKYH-FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (811)
Q Consensus 451 --------~~~~~~---~~y~-f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~ 518 (811)
.+..+. ..+. ...++..-..++..||.|.++|+...+.+++..+.+ + .+.+.-.
T Consensus 227 ~~~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~---~~~~~~~ 292 (601)
T TIGR02094 227 DYAANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------Y---PGYEEEE 292 (601)
T ss_pred hhhhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------h---hhccccc
Confidence 110000 0000 002344566789999999999987665322211111 0 0111113
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHhh----------------------------hhcchhhhccCc-------------
Q 003552 519 PKFNIVSPGADMDIYFPYSEKQKRLTA----------------------------LHGSIEQLLFDP------------- 557 (811)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~----------------------------~~~~i~~~l~~~------------- 557 (811)
.++.-|-||||...|.|.+...-...- .+..-+..|...
T Consensus 293 ~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g 372 (601)
T TIGR02094 293 VPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRG 372 (601)
T ss_pred CCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 357889999999999875433221100 010001111100
Q ss_pred --cccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHH
Q 003552 558 --EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMH 631 (811)
Q Consensus 558 --~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~----~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~ 631 (811)
.+.-..+|...+++.+++++++|+...||.+++++++.++.+.- ..+++|+.|.+.. .|...++.++.+.
T Consensus 373 ~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i~ 448 (601)
T TIGR02094 373 ADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRIV 448 (601)
T ss_pred CcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHHH
Confidence 00001355555789999999999999999999999988886421 3599999998854 3555567788888
Q ss_pred HHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEe-cCC-CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCc
Q 003552 632 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ-PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (811)
Q Consensus 632 ~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~-PS~-~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~ 709 (811)
.++++....++|.|+- ..+ ..+.+.|-.++|++++ ||. +|++|++-+=||..|.+.+++..|...|.. ++.|
T Consensus 449 ~la~~~~~~~kv~f~~----~Yd-~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~n 522 (601)
T TIGR02094 449 EFSKRPEFRGRIVFLE----NYD-INLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDN 522 (601)
T ss_pred HHHhcccCCCCEEEEc----CCC-HHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCc
Confidence 8888756678999985 333 4555655557999999 999 999999999999999999999999998887 6789
Q ss_pred EEEECC------------CCHHHHHHHHHHHH-HhhcCC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003552 710 GFHIDP------------YHPDQAAELMADFF-GKCKEN-----PSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (811)
Q Consensus 710 G~li~p------------~D~e~lA~aI~~~l-~~l~~d-----p~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly 767 (811)
||.|.+ .|++++-++|.+.+ ....++ |..|.+|.++|.+.....|||++++++|.++|
T Consensus 523 Gf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 523 GWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred EEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 999984 89999999998776 333344 66799999999988777899999999999986
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=4.6e-19 Score=187.30 Aligned_cols=291 Identities=23% Similarity=0.328 Sum_probs=210.0
Q ss_pred ceEEEEcCCCchH---HHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHH
Q 003552 408 PDFIIGNYSDGNL---VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (811)
Q Consensus 408 PDlIh~h~~~~~l---va~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (811)
+|++|.+...... .........+.+.+...|....................+.+.. ........++.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKR---LKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHHH---HHHhccccccEEEECCHH
Confidence 5999987765433 3455555677888888888654332211111100000000000 001112247778888765
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccccccc
Q 003552 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (811)
Q Consensus 485 ~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (811)
..... ... +. ..++.++||+++.+.+.+.. .
T Consensus 161 ~~~~~----~~~----------------~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELL----EAL----------------GV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHH----HHh----------------CC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 42200 000 11 23788999999998776530 1
Q ss_pred CCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003552 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (811)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (811)
+...+..+..++++||+.+.||++.+++++..+.+..++++++++|.+... .+.+..++.+++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 111112247899999999999999999999999887667999999999761 345666888888888999
Q ss_pred EeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHH
Q 003552 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724 (811)
Q Consensus 645 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~a 724 (811)
|+| .++..++..+++. +|++++||.+|+||++++|||+||+|||+++.++..+++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 5556788887775 89999999999999999999999999999999999999998878998877789999999
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 725 MADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 725 I~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
+..++ ++++.++.+++.+++.+.+.|+|+..++++.+++...
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 97665 6778889999877888778999999999999887643
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.83 E-value=7.4e-19 Score=198.26 Aligned_cols=262 Identities=15% Similarity=0.169 Sum_probs=176.4
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 406 ~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
.+||+||++++.+++.....++..++|+++..++... ... +..+.+|.+++.|...
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~------~~~------------------w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRL------HKN------------------WITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCc------ccc------------------cccCCCCEEEECCHHH
Confidence 5999999976654433222234468998655443210 001 1235799999999886
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccccC
Q 003552 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (811)
.+. ....|++ ..|+.++.++++.....+..... .++++|
T Consensus 159 ~~~--------------------l~~~gi~--~~ki~v~GiPv~~~f~~~~~~~~-------------------~~~~~~ 197 (391)
T PRK13608 159 KQD--------------------FIDVGID--PSTVKVTGIPIDNKFETPIDQKQ-------------------WLIDNN 197 (391)
T ss_pred HHH--------------------HHHcCCC--HHHEEEECeecChHhcccccHHH-------------------HHHHcC
Confidence 552 1223554 67888888877754332222111 112356
Q ss_pred CCCCCCCC-EEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003552 566 TLSDRSKP-IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (811)
Q Consensus 566 ~l~~~~k~-iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (811)
+ +++++ ++++.|+++..||++.+++++.+ ..+++++++++|+.. +...++.+.++..++|.
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~-------------~l~~~l~~~~~~~~~v~ 259 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK-------------ELKRSLTAKFKSNENVL 259 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH-------------HHHHHHHHHhccCCCeE
Confidence 5 44555 45678999989999999998632 236789987765432 11123333445567899
Q ss_pred EeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC-CCC----cccccccCCcEEEECCCCHH
Q 003552 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGG----PAEIIEHGASGFHIDPYHPD 719 (811)
Q Consensus 645 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~-~GG----~~EiI~dg~~G~li~p~D~e 719 (811)
++|++ +++..+|+. +|++|. .+.|+|+.|||+||+|+|+++ .+| ...++.+.+.|+.. +|++
T Consensus 260 ~~G~~------~~~~~~~~~-aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~ 326 (391)
T PRK13608 260 ILGYT------KHMNEWMAS-SQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPE 326 (391)
T ss_pred EEecc------chHHHHHHh-hhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHH
Confidence 99953 358888884 999997 457999999999999999995 333 23344555566654 5899
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 720 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
+++++|.+++ +|++.+++|++++++.. +.++++.+++.++++++
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 327 EAIKIVASLT----NGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 9999996554 89999999999999986 67999999999988754
No 86
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.81 E-value=1.3e-17 Score=190.99 Aligned_cols=314 Identities=11% Similarity=0.054 Sum_probs=216.4
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 407 ~PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
.-|+|..|+....+++..+.++. ..++.+..|..++. ++++. .+..-..-+..|-.||.|-+.|...
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs----~eifr--------~LP~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPS----ADVFN--------ILPWREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCC----hHHHh--------hCCchHHHHHHHhcCCeEEeCCHHH
Confidence 44899999999888888886653 46788888876442 22221 1111122345788999999999887
Q ss_pred Hhhccccccccccccc-cc---cccc---------eeeeccCCCCC--CcEEEecCCCCCCCCCCCchH---HHHHhhhh
Q 003552 486 IAGTKNTVGQYESHTA-FT---LPGL---------YRVVHGIDVFD--PKFNIVSPGADMDIYFPYSEK---QKRLTALH 547 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~-~~---lp~l---------y~v~~Gi~~~~--~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~ 547 (811)
....-+...+...... .. .+.. -....++.+.. -++.++|.|||.+.|.+.... ..+...
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~-- 277 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMER-- 277 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHH--
Confidence 6543332221110000 00 0000 00000111112 247889999999988653211 111111
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHH
Q 003552 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREE 623 (811)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LVIVG~g~~~~~~~d~e~ 623 (811)
.++.+| ++++|++++|++..||+...++||.++.+.+|+ ++|++||.... +..+++
T Consensus 278 ------------lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr---~~v~~y 337 (487)
T TIGR02398 278 ------------IRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAA---SGMTIY 337 (487)
T ss_pred ------------HHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCc---ccchHH
Confidence 112233 678999999999999999999999999877774 79999987643 334555
Q ss_pred HHHHHHHHHHHHHc-------CCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCC----CE
Q 003552 624 IAEIEKMHELMKTY-------KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PT 692 (811)
Q Consensus 624 ~~~~~~l~~li~~~-------~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl----PV 692 (811)
.+..+++++++.+. +..+-+.+.+ .++.+++..+|+ +||+++.+|..||++|+..|+|+|+. |+
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 66777778877775 3334455666 788999999999 59999999999999999999999998 99
Q ss_pred EEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 693 IAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
|.|.++|..+.+ ..+++++|.|++++|++|.++++ ..++.+++.-+..++++ .++|....++.++.-
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~~fl~~ 479 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWADEFLAA 479 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 999999998766 35899999999999999988874 34556666666667777 788988888887653
No 87
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.79 E-value=4.5e-18 Score=189.58 Aligned_cols=275 Identities=14% Similarity=0.105 Sum_probs=177.4
Q ss_pred CCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHH
Q 003552 406 GFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (811)
Q Consensus 406 ~~PDlIh~h~~-~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (811)
.+||+||+|.. ..++.++++++.+|+|++++-+++ .+..... .|.. . .. ....-+.||.++++|..
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~--~----~~----r~~~~~~ad~~~~~s~~ 151 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPE--E----IN----RQLTGHIADLHFAPTEQ 151 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCcc--H----HH----HHHHHHHHHhccCCCHH
Confidence 48999999963 446778999999999998765543 1110000 0100 0 00 01123358999999988
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccccccc
Q 003552 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (811)
Q Consensus 485 ~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (811)
..+.. ...|++ +.++.+++||+....+.+...... ...++.+
T Consensus 152 ~~~~l--------------------~~~G~~--~~~I~vign~~~d~~~~~~~~~~~----------------~~~~~~~ 193 (365)
T TIGR00236 152 AKDNL--------------------LRENVK--ADSIFVTGNTVIDALLTNVEIAYS----------------SPVLSEF 193 (365)
T ss_pred HHHHH--------------------HHcCCC--cccEEEeCChHHHHHHHHHhhccc----------------hhHHHhc
Confidence 76521 112554 779999999973222211110000 0011223
Q ss_pred CCCCCCCCCEEEEEe-ccC-ccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003552 565 GTLSDRSKPIVFSMA-RLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (811)
Q Consensus 565 g~l~~~~k~iIl~vG-RL~-~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (811)
+ .+++++++.+ |.. ..||+..+++|+.++.+..++++++++|++.. .... .+.+..+..++
T Consensus 194 ~----~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~---~~~~~~~~~~~ 256 (365)
T TIGR00236 194 G----EDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVRE---PLHKHLGDSKR 256 (365)
T ss_pred C----CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHH---HHHHHhCCCCC
Confidence 3 1234555554 542 45899999999999877778899999865432 0111 13344466678
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc-CCCCcccccccCCcEEEECCCCHHHH
Q 003552 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQA 721 (811)
Q Consensus 643 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT-~~GG~~EiI~dg~~G~li~p~D~e~l 721 (811)
|+|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.+| +|+++ +.|++++
T Consensus 257 v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~i 324 (365)
T TIGR00236 257 VHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKENI 324 (365)
T ss_pred EEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHHH
Confidence 99998 5667788888886 99999887 56689999999999996 778888988776 55666 4799999
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003552 722 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (811)
Q Consensus 722 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~ 765 (811)
+++|.+++ +||+.++++++++..+- +..+++++++.+.+
T Consensus 325 ~~ai~~ll----~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 325 TKAAKRLL----TDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHH----hChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 99996554 79999988887663222 34455555555544
No 88
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.79 E-value=1e-16 Score=169.67 Aligned_cols=293 Identities=17% Similarity=0.230 Sum_probs=205.7
Q ss_pred HHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccc--------CCCC-hhhHhhhhhhhhhhhhhhHHHHHH
Q 003552 402 AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTK--------YPDS-DIYWKKFDEKYHFSCQFTADLIAM 472 (811)
Q Consensus 402 ~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k--------~~~s-~~~~~~~~~~y~f~~~~~~e~~a~ 472 (811)
+..+..|||.+-....+ +.-.+.++..++|++..+|-.--++ .+.+ -+.|.++.-.-.|++- -..+=
T Consensus 145 ai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~l---Y~~~G 220 (465)
T KOG1387|consen 145 AIIRFPPDIFIDTMGYP-FSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALL---YQSAG 220 (465)
T ss_pred HHHhCCchheEecCCCc-chhHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHH---HHhcc
Confidence 33466999988554333 2222344567899999999532111 0011 1222222111111111 11234
Q ss_pred hhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhh
Q 003552 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ 552 (811)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~ 552 (811)
..||.++++|.......+..++ ..+..+|+|..+.+....
T Consensus 221 ~~ad~vm~NssWT~nHI~qiW~-----------------------~~~~~iVyPPC~~e~lks----------------- 260 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQIWQ-----------------------SNTCSIVYPPCSTEDLKS----------------- 260 (465)
T ss_pred ccceEEEecchhhHHHHHHHhh-----------------------ccceeEEcCCCCHHHHHH-----------------
Confidence 5799999999886553332221 235678888776642111
Q ss_pred hccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhc------cCCCeEEEEEeCcCCCCCCcchHHHHH
Q 003552 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAE 626 (811)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~------~~~~v~LVIVG~g~~~~~~~d~e~~~~ 626 (811)
..+. ...+.+.++++|.+.|.||.. +++.++.... ..+.++|++||+... .++.+.
T Consensus 261 ----------~~~t-e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~er 322 (465)
T KOG1387|consen 261 ----------KFGT-EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEER 322 (465)
T ss_pred ----------Hhcc-cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHH
Confidence 0111 145678999999999999998 5554443322 235699999999876 455677
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc-ccccc
Q 003552 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIE 705 (811)
Q Consensus 627 ~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~-~EiI~ 705 (811)
.+.|+.++++++++++|.|.- .++.+++..++.. |.+.|+..+-|-||+.++|+||+|+-.|+.+.||+ -|||.
T Consensus 323 vk~Lkd~a~~L~i~~~v~F~~----N~Py~~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~ 397 (465)
T KOG1387|consen 323 VKSLKDLAEELKIPKHVQFEK----NVPYEKLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVT 397 (465)
T ss_pred HHHHHHHHHhcCCccceEEEe----cCCHHHHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeee
Confidence 889999999999999999987 7899999999995 99999999999999999999999999999999987 56665
Q ss_pred c---CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003552 706 H---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (811)
Q Consensus 706 d---g~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly 767 (811)
+ ..+||+.+ +.++.|++|.+.+. .|++.+..|.++||..+ .+|+-....+.+.+.+
T Consensus 398 ~~~G~~tGFla~--t~~EYaE~iLkIv~---~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 398 PWDGETTGFLAP--TDEEYAEAILKIVK---LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred ccCCccceeecC--ChHHHHHHHHHHHH---cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 3 34799984 67899999988764 68888999999999998 8999888877777654
No 89
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.77 E-value=4.4e-17 Score=179.91 Aligned_cols=244 Identities=12% Similarity=0.111 Sum_probs=165.0
Q ss_pred Cc-eEEEEcCCCch---HHHHHH--HHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEe
Q 003552 407 FP-DFIIGNYSDGN---LVASLL--AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (811)
Q Consensus 407 ~P-DlIh~h~~~~~---lva~ll--a~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (811)
++ |+||.+++... +...++ .++.|+|+++++|+++......... . ...+...++.||.|||
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~-----------~--~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYY-----------L--MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccch-----------h--hHHHHHHHHhCCEEEE
Confidence 56 99999886542 122222 2344899999999986532211100 0 1235678899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccc
Q 003552 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (811)
Q Consensus 481 ~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (811)
.|....+.. ...|+. ..++.++++..+.....+.
T Consensus 130 ~S~~~~~~l--------------------~~~g~~--~~~i~~~~~~~~~~~~~~~------------------------ 163 (333)
T PRK09814 130 HSKKMKDRL--------------------VEEGLT--TDKIIVQGIFDYLNDIELV------------------------ 163 (333)
T ss_pred CCHHHHHHH--------------------HHcCCC--cCceEeccccccccccccc------------------------
Confidence 999876621 122443 5577666655433111000
Q ss_pred ccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003552 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (811)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (811)
. ....++.|+|+|++...+++. + ..++++|+|+|+|+. .. ...
T Consensus 164 ----~--~~~~~~~i~yaG~l~k~~~l~---~-------~~~~~~l~i~G~g~~------------~~---------~~~ 206 (333)
T PRK09814 164 ----K--TPSFQKKINFAGNLEKSPFLK---N-------WSQGIKLTVFGPNPE------------DL---------ENS 206 (333)
T ss_pred ----c--cccCCceEEEecChhhchHHH---h-------cCCCCeEEEECCCcc------------cc---------ccC
Confidence 0 023456899999999543211 1 236799999999976 11 345
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecC-C----------CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCc
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-F----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS-~----------~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~ 709 (811)
++|.|+| .++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.++..|+|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 7888999999985 4433332 1 13678899999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003552 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 761 (811)
Q Consensus 710 G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~ 761 (811)
|++++ +.++++++|.. + +++.+++|++++++.+ +++.-..+++
T Consensus 281 G~~v~--~~~el~~~l~~----~--~~~~~~~m~~n~~~~~-~~~~~g~~~~ 323 (333)
T PRK09814 281 GFVVD--SLEELPEIIDN----I--TEEEYQEMVENVKKIS-KLLRNGYFTK 323 (333)
T ss_pred eEEeC--CHHHHHHHHHh----c--CHHHHHHHHHHHHHHH-HHHhcchhHH
Confidence 99998 67888888854 2 4577889999999887 5544333333
No 90
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.75 E-value=1.8e-16 Score=177.26 Aligned_cols=250 Identities=14% Similarity=0.137 Sum_probs=159.7
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCH
Q 003552 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (811)
Q Consensus 405 ~~~PDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (811)
..+||+||++.+.+ +...+..+++.|+|+++..|.. .|....... ....+.+|.+++++.
T Consensus 83 ~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~~---------~~~~~~~d~i~~~~~ 143 (380)
T PRK00025 83 AEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGRA---------FKIAKATDHVLALFP 143 (380)
T ss_pred HcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchHH---------HHHHHHHhhheeCCc
Confidence 35899999876532 3333345667799988765431 111000000 113567899999887
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccc
Q 003552 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (811)
Q Consensus 484 ~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 563 (811)
...+. + . ..|+ ++.++.|.+......+..... .+..
T Consensus 144 ~~~~~-------~------------~-~~g~-----~~~~~G~p~~~~~~~~~~~~~-------------------~~~~ 179 (380)
T PRK00025 144 FEAAF-------Y------------D-KLGV-----PVTFVGHPLADAIPLLPDRAA-------------------ARAR 179 (380)
T ss_pred cCHHH-------H------------H-hcCC-----CeEEECcCHHHhcccccChHH-------------------HHHH
Confidence 65431 1 0 0122 245555554332211111111 1133
Q ss_pred cCCCCCCCCCEEE-EEe-ccCcc-CCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CC
Q 003552 564 VGTLSDRSKPIVF-SMA-RLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KL 639 (811)
Q Consensus 564 ~g~l~~~~k~iIl-~vG-RL~~~-Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L 639 (811)
+|+ ++++++|+ +.| |.... ++++.+++++..+.+.+++++++++|+++. ..+.+++.++++ ++
T Consensus 180 l~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 180 LGL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGL 246 (380)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCC
Confidence 565 45566654 444 34443 457899999999887778899999987332 145566667766 55
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc-----------------CCCCccc
Q 003552 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-----------------CHGGPAE 702 (811)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT-----------------~~GG~~E 702 (811)
. +.+.. +++..+|+. +|++|.+| |.+.+|||+||+|+|++ +.++.++
T Consensus 247 ~--v~~~~--------~~~~~~~~~-aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (380)
T PRK00025 247 E--VTLLD--------GQKREAMAA-ADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPN 310 (380)
T ss_pred C--eEEEc--------ccHHHHHHh-CCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHH
Confidence 3 55542 367888884 99999987 88889999999999987 5667778
Q ss_pred ccccCC--cEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003552 703 IIEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (811)
Q Consensus 703 iI~dg~--~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 750 (811)
++.++. .+++.+..|++++++++.+++ +|++.+++|++++.+..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 311 LLAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred HhcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 887654 557778889999999996655 89999999999975554
No 91
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.75 E-value=1.2e-16 Score=177.17 Aligned_cols=250 Identities=14% Similarity=0.126 Sum_probs=167.2
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHH
Q 003552 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (811)
Q Consensus 406 ~~PDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (811)
.+||+||+|... ..+.+.++++..|+|++++.|+... +.... .|.. . .....+.+|.++++|..
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~----~--------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEE----N--------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchH----H--------HHHHHHHhhhccCCCHH
Confidence 389999999643 3567788888999998877665322 10011 1110 0 11245678999999988
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCC-CCCCCCCCchHHHHHhhhhcchhhhccCccccccc
Q 003552 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (811)
Q Consensus 485 ~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 563 (811)
..+. ....|++ +.|+.+++|++ |...+.+...... ..++.
T Consensus 152 ~~~~--------------------l~~~G~~--~~kI~vign~v~d~~~~~~~~~~~~-----------------~~~~~ 192 (363)
T cd03786 152 ARRN--------------------LLQEGEP--PERIFVVGNTMIDALLRLLELAKKE-----------------LILEL 192 (363)
T ss_pred HHHH--------------------HHHcCCC--cccEEEECchHHHHHHHHHHhhccc-----------------hhhhh
Confidence 7551 1123554 78999999985 4322211110000 00122
Q ss_pred cCCCCCCCCCEEEEEeccCc---cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-
Q 003552 564 VGTLSDRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL- 639 (811)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~---~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L- 639 (811)
+++ ++++.++++.||... .||++.+++|+.++.+. ++.+++.|++.. .+++++.+.++++
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~l~~~~~~~~~~ 256 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPRIREAGLEFLGH 256 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHHHHHHHHhhccC
Confidence 444 345567788999875 79999999999988643 566766666654 5677778888876
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCC-CCcccccccCCcEEEECCC-C
Q 003552 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPY-H 717 (811)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~-GG~~EiI~dg~~G~li~p~-D 717 (811)
.++|+|+| .....++..+++. ||++|.||- | ++.|||+||+|+|+++. +...+.+++| ..+..+ |
T Consensus 257 ~~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g---~~~~~~~~ 323 (363)
T cd03786 257 HPNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG---TNVLVGTD 323 (363)
T ss_pred CCCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee---eEEecCCC
Confidence 67899998 4556788888885 999999984 4 47899999999999964 4456666544 433333 6
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHH
Q 003552 718 PDQAAELMADFFGKCKENPSHWKKI 742 (811)
Q Consensus 718 ~e~lA~aI~~~l~~l~~dp~~~~~m 742 (811)
+++++++|.+++ +|+..+..|
T Consensus 324 ~~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 324 PEAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred HHHHHHHHHHHh----cCchhhhcC
Confidence 899999996655 788776665
No 92
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.75 E-value=3.8e-16 Score=186.71 Aligned_cols=341 Identities=13% Similarity=0.110 Sum_probs=232.4
Q ss_pred HHcCCCceEEEEcCCCchHHHH-----HHHHH----------cCCcEEEEecCCccccC---CCChh-------------
Q 003552 402 AELQGFPDFIIGNYSDGNLVAS-----LLAYK----------MGITQCTIAHALEKTKY---PDSDI------------- 450 (811)
Q Consensus 402 ~~~~~~PDlIh~h~~~~~lva~-----lla~~----------lgvp~v~t~H~l~~~k~---~~s~~------------- 450 (811)
+.+..+||+||+|.+.++++.. ++... -+.+.|+|.|++..... +...+
T Consensus 243 r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl 322 (778)
T cd04299 243 RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGL 322 (778)
T ss_pred HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCC
Confidence 3446689999999999988776 44321 13568999999755431 11110
Q ss_pred hHhhhhhhh-hh----hhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEec
Q 003552 451 YWKKFDEKY-HF----SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS 525 (811)
Q Consensus 451 ~~~~~~~~y-~f----~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIp 525 (811)
.+..+.... .+ ..++..-..++..|+.|.++|+-.-.-+++....+ ..|.+.-..++.-|-
T Consensus 323 ~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~--------------~~g~p~~~~~i~~IT 388 (778)
T cd04299 323 SRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGL--------------WPGFPVEEVPIGHVT 388 (778)
T ss_pred CHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhh--------------hccCCcccCceecee
Confidence 111000000 00 01344566789999999999987643333322111 123333245688899
Q ss_pred CCCCCCCCC-CCchHHH---------------------------HHhhhhcchhhhccCcc---------------cccc
Q 003552 526 PGADMDIYF-PYSEKQK---------------------------RLTALHGSIEQLLFDPE---------------QNDE 562 (811)
Q Consensus 526 nGvD~~~f~-p~~~~~~---------------------------r~~~~~~~i~~~l~~~~---------------~~~~ 562 (811)
||||...|. |....-- .+.+.+...++.|.... ....
T Consensus 389 NGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 468 (778)
T cd04299 389 NGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIG 468 (778)
T ss_pred CCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhh
Confidence 999999887 4321110 00001111111111110 0000
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~----~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 638 (811)
..+..-+++.++|+++.|+...|+.++++..+.++.+.- ..+++|+.|.+.. .|...++.++.+.+++++..
T Consensus 469 ~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p~ 544 (778)
T cd04299 469 EADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRPE 544 (778)
T ss_pred hcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCcC
Confidence 124334778899999999999999999999888775421 2599999998865 45666788889999998777
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccccEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECC-
Q 003552 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP- 715 (811)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p- 715 (811)
..++|.|+- ..+ ..+.+.|-..+|++++||+ +|++|++-+-||.-|.+.+++-.|...|-. +|.|||.|.+
T Consensus 545 ~~~kVvfle----~Yd-~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 545 FRGRIVFLE----DYD-MALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred CCCcEEEEc----CCC-HHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 788999986 344 4566666557999999999 999999999999999999999999999987 8899999988
Q ss_pred -----------CCHHHHHHHHHHHHH-hhcC-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 716 -----------YHPDQAAELMADFFG-KCKE-----NPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 716 -----------~D~e~lA~aI~~~l~-~l~~-----dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
.|.+++-+.|.+.+. ...+ .|..|.+|.+++++.+...|||++++++|.+-
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 567777777765443 3334 38899999999999988899999999999774
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.73 E-value=5.1e-16 Score=188.14 Aligned_cols=307 Identities=15% Similarity=0.149 Sum_probs=208.3
Q ss_pred ceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHH
Q 003552 408 PDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (811)
Q Consensus 408 PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (811)
-|+|..|+....++...+.++. ..++.+..|..++. +.++ +.+.+-..-+..|-.||.|-+.|+...
T Consensus 232 gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs----~Eif--------r~LP~r~elL~glL~aDlIGFqT~~y~ 299 (934)
T PLN03064 232 GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPS----SEIH--------RTLPSRSELLRSVLAADLVGFHTYDYA 299 (934)
T ss_pred CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCC----hHHH--------hhCCcHHHHHHHHhcCCeEEeCCHHHH
Confidence 4899999999888888887764 57888899976542 2221 222222234457889999999998766
Q ss_pred hhccccccccccccccccccceeeeccCCCCC--CcEEEecCCCCCCCCCCCchH---HHHHhhhhcchhhhccCccccc
Q 003552 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYSEK---QKRLTALHGSIEQLLFDPEQND 561 (811)
Q Consensus 487 ~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~--~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~i~~~l~~~~~~~ 561 (811)
...-....... ++-....++.... -++.+.|-|||.+.|...... ..+...+ +
T Consensus 300 rhFl~~c~rlL--------g~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~l--------------r 357 (934)
T PLN03064 300 RHFVSACTRIL--------GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL--------------K 357 (934)
T ss_pred HHHHHHHHHHh--------CccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHH--------------H
Confidence 53222111100 0000111222212 246678999999888643211 1121111 1
Q ss_pred cccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCe----EEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003552 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (811)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v----~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~ 637 (811)
+.+ .++++|++++|++..||+...++||.++.+.+|++ .|+-|+-.. ...-+++.+...++.+++.+.
T Consensus 358 ~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~ps---r~~v~eY~~l~~~V~~~V~rI 429 (934)
T PLN03064 358 ERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPT---RTDVPEYQKLTSQVHEIVGRI 429 (934)
T ss_pred HHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCC---CCCcHHHHHHHHHHHHHHHHH
Confidence 112 35679999999999999999999999987776764 444443221 122234444455555555543
Q ss_pred CC-CCc-----EEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCC----CEEEcCCCCcccccccC
Q 003552 638 KL-DGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PTFATCHGGPAEIIEHG 707 (811)
Q Consensus 638 ~L-~~~-----V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl----PVIAT~~GG~~EiI~dg 707 (811)
+- .+. |+++. ..++.+++..+|+ .||+||+||..|||+++..|||+|+. +.|.|.++|..+.+ +
T Consensus 430 N~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~ 503 (934)
T PLN03064 430 NGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--G 503 (934)
T ss_pred hhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--C
Confidence 21 122 44443 2478999999999 49999999999999999999999954 44459889888887 4
Q ss_pred CcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 708 ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 708 ~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
..|++|+|.|.+++|++|.+++. .+++.++++.+++++++ ..+||...++.+++-
T Consensus 504 ~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~ 558 (934)
T PLN03064 504 AGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSE 558 (934)
T ss_pred CceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHH
Confidence 46999999999999999988773 38888999999999998 889999999997653
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.68 E-value=4.6e-15 Score=172.40 Aligned_cols=169 Identities=12% Similarity=0.182 Sum_probs=146.5
Q ss_pred CCEEEEEe--ccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC---------
Q 003552 572 KPIVFSMA--RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--------- 640 (811)
Q Consensus 572 k~iIl~vG--RL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~--------- 640 (811)
+..+++++ || +.|.++.+++++.+.....|++.|.+.|.+.+ ....+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 34577788 99 99999999999999999999999999998853 11245666777777666
Q ss_pred --------------------CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc
Q 003552 641 --------------------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (811)
Q Consensus 641 --------------------~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~ 700 (811)
++|.|.|. .+..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy----~~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTL----TNEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEec----CCHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 78999994 334578889986 99999999999999 9999999999999 5678
Q ss_pred ccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 701 ~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
.++|.||.||+++ +|.++++++|..+| .+++.|++++..+.+.+ ++||-+.+.++|.++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 9999999999999 69999999996655 89999999999999998 999999999998775
No 95
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.62 E-value=3.9e-14 Score=161.90 Aligned_cols=329 Identities=15% Similarity=0.171 Sum_probs=181.6
Q ss_pred Cce-EEEEcCCCchHHHHHHHH-HcCCcEEEEecCCccccCC---CChh-------hHhhhhhhhhhhhhhhHHHHHHhh
Q 003552 407 FPD-FIIGNYSDGNLVASLLAY-KMGITQCTIAHALEKTKYP---DSDI-------YWKKFDEKYHFSCQFTADLIAMNN 474 (811)
Q Consensus 407 ~PD-lIh~h~~~~~lva~lla~-~lgvp~v~t~H~l~~~k~~---~s~~-------~~~~~~~~y~f~~~~~~e~~a~~~ 474 (811)
++. |.|+|-|..+....++.+ ...|..|+|.|+.-..++. ..++ .+......+....+...|+.+...
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 444 459999987654433333 2357789999995332221 0111 122333334444456678889999
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHH----HHhhhhcch
Q 003552 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQK----RLTALHGSI 550 (811)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~----r~~~~~~~i 550 (811)
||...|+|.-...+++..++ ...=.|+|||+|.+.|....+-.+ ...++++-+
T Consensus 222 AdvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv 278 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFV 278 (633)
T ss_dssp SSEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999876654432211 111247899999987765544222 222333333
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeccC-ccCCHHHHHHHHHHhhcc----CCC---eEEEEEeCcCCCCCCcchH
Q 003552 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQL----REL---VNLVVVAGYIDVNKSKDRE 622 (811)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgi~~LleA~~~l~~~----~~~---v~LVIVG~g~~~~~~~d~e 622 (811)
...+++..+ + ...+..+|++.||.+ +.||++.+++|++++... ..+ +-|+|+=.. .++.+.|
T Consensus 279 ~~~f~g~~d------f-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~---~~~~~ve 348 (633)
T PF05693_consen 279 RGHFYGHYD------F-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAK---TNSFNVE 348 (633)
T ss_dssp HHHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---S---EEEE-HH
T ss_pred HHHhcccCC------C-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCc---cCCcCHH
Confidence 333343322 1 123456799999998 589999999999998531 223 334444322 2233333
Q ss_pred HHH----------------------------------------------------------------------HHHHHHH
Q 003552 623 EIA----------------------------------------------------------------------EIEKMHE 632 (811)
Q Consensus 623 ~~~----------------------------------------------------------------------~~~~l~~ 632 (811)
..+ ..+.+-.
T Consensus 349 ~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn 428 (633)
T PF05693_consen 349 SLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILN 428 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHH
Confidence 221 1112222
Q ss_pred HHHHcCCC----Cc--EEEecc---ccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccc
Q 003552 633 LMKTYKLD----GQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI 703 (811)
Q Consensus 633 li~~~~L~----~~--V~flG~---~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~Ei 703 (811)
.+.+.+|. ++ |.|.+. -.+.+-+-+.+.++.. +|+.|+||+||+||.|.+|+.++|+|+|+|+..|+...
T Consensus 429 ~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~ 507 (633)
T PF05693_consen 429 MIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCW 507 (633)
T ss_dssp HHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHH
T ss_pred HHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHH
Confidence 22233331 22 455541 1233444567777774 99999999999999999999999999999999998766
Q ss_pred ccc-----CCcEEEE-C--CCCHHHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 704 IEH-----GASGFHI-D--PYHPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 704 I~d-----g~~G~li-~--p~D~e~lA~aI~~~l~~l~~-dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
+.+ ...|+.| + ..+.++.++.|.+++..... ++..+..+..++.+. .+..+|+.....|.+.|+.-
T Consensus 508 ~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~L-S~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 508 MQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERL-SDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp HHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHH-GGGGBHHHHCHHHHHHHHHH
T ss_pred HHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHH
Confidence 642 3457654 2 34677777777776655444 566666676666554 48999999999998877643
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.57 E-value=6.1e-15 Score=140.21 Aligned_cols=130 Identities=21% Similarity=0.321 Sum_probs=96.2
Q ss_pred CCEEEEEeccCccCCHHHHHH-HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003552 572 KPIVFSMARLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (811)
Q Consensus 572 k~iIl~vGRL~~~Kgi~~Lle-A~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (811)
.++|+++|++.+.|+++.+++ ++.++.+..|++.|+|+|++++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 357999999999999999999 9999998889999999999765 13333 235899999
Q ss_pred CcCChHHHHHHHHccccEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHH
Q 003552 651 NRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (811)
Q Consensus 651 ~~v~~~el~~~ia~aadvfV~PS~-~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l 729 (811)
.+ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 55 589999996 999999985 67899999999999999999988 677777666678878 889999999997665
No 97
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.50 E-value=3.2e-12 Score=144.22 Aligned_cols=250 Identities=16% Similarity=0.115 Sum_probs=151.7
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCH
Q 003552 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (811)
Q Consensus 405 ~~~PDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (811)
..+||+|++....+ ++.....++.+|+|+++.+ ..+-+ .|.... -+...+.+|.|+++++
T Consensus 87 ~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~w-------aw~~~~-----------~r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 87 QAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQVW-------AWRKWR-----------AKKIEKATDFLLAILP 147 (385)
T ss_pred hcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcHh-------hcCcch-----------HHHHHHHHhHhhccCC
Confidence 35999999888644 5555668889999987543 21111 122111 1234568999999987
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCC-CchHHHHHhhhhcchhhhccCcccccc
Q 003552 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP-YSEKQKRLTALHGSIEQLLFDPEQNDE 562 (811)
Q Consensus 484 ~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p-~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (811)
.+.+. | . ..| .+..++.|++..+.... ...... ++
T Consensus 148 ~e~~~-------~------------~-~~g-----~~~~~vGnPv~~~~~~~~~~~~~~-------------------r~ 183 (385)
T TIGR00215 148 FEKAF-------Y------------Q-KKN-----VPCRFVGHPLLDAIPLYKPDRKSA-------------------RE 183 (385)
T ss_pred CcHHH-------H------------H-hcC-----CCEEEECCchhhhccccCCCHHHH-------------------HH
Confidence 76441 1 1 011 24556767663322211 111111 13
Q ss_pred ccCCCCCCCCCEEEEEe--ccCc-cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003552 563 HVGTLSDRSKPIVFSMA--RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vG--RL~~-~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 639 (811)
.+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.... ..+.++++.+.++.
T Consensus 184 ~lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~ 250 (385)
T TIGR00215 184 KLGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGP 250 (385)
T ss_pred HcCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCC
Confidence 3565 56677776663 7776 7899999999999988778898877654322 13455666667766
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC-----------------ccc
Q 003552 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-----------------PAE 702 (811)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG-----------------~~E 702 (811)
..+|.+++ ++...+|+ ++|++|.+| |.+.+|||+||+|+|.+.-.. ++.
T Consensus 251 ~~~v~~~~--------~~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~n 316 (385)
T TIGR00215 251 DLQLHLID--------GDARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPN 316 (385)
T ss_pred CCcEEEEC--------chHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccH
Confidence 66777764 13456777 599999999 888889999999999872222 122
Q ss_pred ccccCCcEE-EE-CCCCHHHHHHHHHHHHHhhcCCH----HHHHHHHHHHHH
Q 003552 703 IIEHGASGF-HI-DPYHPDQAAELMADFFGKCKENP----SHWKKISDGGLK 748 (811)
Q Consensus 703 iI~dg~~G~-li-~p~D~e~lA~aI~~~l~~l~~dp----~~~~~ms~~a~~ 748 (811)
++.+..... ++ +.-+++.+++.+.++ ++|+ +.++++.+.-.+
T Consensus 317 il~~~~~~pel~q~~~~~~~l~~~~~~l----l~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 317 ILANRLLVPELLQEECTPHPLAIALLLL----LENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred HhcCCccchhhcCCCCCHHHHHHHHHHH----hcCCcccHHHHHHHHHHHHH
Confidence 222211111 11 223577777777554 4888 777776555443
No 98
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=2.4e-11 Score=129.43 Aligned_cols=378 Identities=14% Similarity=0.140 Sum_probs=230.0
Q ss_pred HHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHH
Q 003552 320 LLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 399 (811)
Q Consensus 320 ~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~ 399 (811)
|..|++.|++|+ ++.-. +.. ..+.+...++++|+.+|--++..... +.-..+ +..|.+.+.-.
T Consensus 33 A~Sla~~gf~Vd----liGy~--~s~------p~e~l~~hprI~ih~m~~l~~~~~~p----~~~~l~-lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYV--ESI------PLEELLNHPRIRIHGMPNLPFLQGGP----RVLFLP-LKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEec--CCC------ChHHHhcCCceEEEeCCCCcccCCCc----hhhhhH-HHHHHHHHHHH
Confidence 346789999999 66432 111 23444456678888876554322111 111111 11111111111
Q ss_pred HHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCC
Q 003552 400 ITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNAD 476 (811)
Q Consensus 400 i~~~~~~~PDlIh~h~~~~---~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD 476 (811)
+.-...+.||+|....+++ -.++.+++...|.++++.-|++..+- .............+.. ...|...-+.||
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl--~l~~~~g~~h~lV~l~--~~~E~~fgk~a~ 171 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSL--QLKLKLGFQHPLVRLV--RWLEKYFGKLAD 171 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHH--HHHhhcCCCCchHHHH--HHHHHHhhcccc
Confidence 1111156899999887764 45777777888999999999876540 0000001111111111 123555667799
Q ss_pred EEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecC-----CCCCCC----CCCCchH----HHHH
Q 003552 477 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-----GADMDI----YFPYSEK----QKRL 543 (811)
Q Consensus 477 ~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpn-----GvD~~~----f~p~~~~----~~r~ 543 (811)
.=.|+|........+.+| |+ +..+++. +.+.+. |.+.... ..|
T Consensus 172 ~nLcVT~AMr~dL~qnWg-------------------i~----ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar- 227 (444)
T KOG2941|consen 172 YNLCVTKAMREDLIQNWG-------------------IN----RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAR- 227 (444)
T ss_pred cchhhHHHHHHHHHHhcC-------------------Cc----eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhc-
Confidence 999999888764444433 11 1112211 111111 1111000 000
Q ss_pred hhhhcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhh-----c--cCCCeEEEEEeCcCCCC
Q 003552 544 TALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-----Q--LRELVNLVVVAGYIDVN 616 (811)
Q Consensus 544 ~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~-----~--~~~~v~LVIVG~g~~~~ 616 (811)
..-.+..+...|..-+...-... ......++++....++..++..|++|+..-. + ..|.+-.+|-|.||.
T Consensus 228 ~~q~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl-- 304 (444)
T KOG2941|consen 228 EPQDKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL-- 304 (444)
T ss_pred ccccchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch--
Confidence 00011222233322222000111 1344557888888999999999999998432 1 236677788888988
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEe--cCC-CCCCCHHHHHHHHcCCCEE
Q 003552 617 KSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ--PAF-YEAFGLTVVEAMTCGLPTF 693 (811)
Q Consensus 617 ~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~--PS~-~E~fGltvlEAMa~GlPVI 693 (811)
.+++.+.++++++. +|.+.- .+...++....++ ++|..|+ .|. .=-.|++|+....||+||+
T Consensus 305 ----------kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPvc 369 (444)
T KOG2941|consen 305 ----------KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 369 (444)
T ss_pred ----------hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCcee
Confidence 78888999999885 466654 3777778888888 4887664 443 2357999999999999999
Q ss_pred EcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003552 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 764 (811)
Q Consensus 694 AT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll 764 (811)
|-+.....|+|+||+||++|+ |.+++|+.+.-++...-+|.....++.+++++. +...|+..-++..
T Consensus 370 A~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 370 AVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTA 436 (444)
T ss_pred eecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhh
Confidence 999999999999999999997 899999999888876667999999999999987 4567776555443
No 99
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.39 E-value=7.3e-11 Score=135.83 Aligned_cols=311 Identities=14% Similarity=0.138 Sum_probs=180.5
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 407 ~PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
.-|+|..|+....+++..+.++. ..++.+..|..+++ +++ ++.+..-..-+..|-.||.|-+.|+..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs----~e~--------fr~lP~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPS----SEI--------FRCLPWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHH--------HTTSTTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCC----HHH--------HhhCCcHHHHHHHhhcCCEEEEecHHH
Confidence 66899999999888887777764 57888899976542 121 111122222345788999999999887
Q ss_pred Hhhccccccccccccccccccceeeec-cCCCCC--CcEEEecCCCCCCCCCCCchH---HHHHhhhhcchhhhccCccc
Q 003552 486 IAGTKNTVGQYESHTAFTLPGLYRVVH-GIDVFD--PKFNIVSPGADMDIYFPYSEK---QKRLTALHGSIEQLLFDPEQ 559 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~~~lp~ly~v~~-Gi~~~~--~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~i~~~l~~~~~ 559 (811)
....-...... ++.-+.... ++.+.. -++.+.|-|||.+.+...... ..+...+
T Consensus 209 ~~nFl~~~~r~-------lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l------------- 268 (474)
T PF00982_consen 209 ARNFLSCCKRL-------LGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEEL------------- 268 (474)
T ss_dssp HHHHHHHHHHH-------S-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHH-------------
T ss_pred HHHHHHHHHHH-------cCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHH-------------
Confidence 65332222111 110011111 122212 256778999998776432111 1111111
Q ss_pred cccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003552 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (811)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~----~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~ 635 (811)
++.++ .+..+|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++-.. .+...++.+..+++.+++.
T Consensus 269 -~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~ps---r~~~~~y~~~~~~v~~~v~ 340 (474)
T PF00982_consen 269 -REKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPS---REDVPEYQELRREVEELVG 340 (474)
T ss_dssp -HHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B----STTSHHHHHHHHHHHHHHH
T ss_pred -HHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeecc---CccchhHHHHHHHHHHHHH
Confidence 11121 224899999999999999999999998876554 58888887632 3344445566666666665
Q ss_pred H----cCCCC--cEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCC----EEEcCCCCcccccc
Q 003552 636 T----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIE 705 (811)
Q Consensus 636 ~----~~L~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlP----VIAT~~GG~~EiI~ 705 (811)
+ +|-.+ -|.++. ..++.++++.+++. ||+++.+|..+|+-++..|+.+|-.+ +|.|...|..+.+.
T Consensus 341 ~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~ 416 (474)
T PF00982_consen 341 RINGKYGTPDWTPIIYIY---RSLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLS 416 (474)
T ss_dssp HHHHHH-BTTB-SEEEE----S---HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-T
T ss_pred HHHhhcccCCceeEEEEe---cCCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcC
Confidence 4 44333 356554 36789999999995 99999999999999999999999765 77788888888875
Q ss_pred cCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003552 706 HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (811)
Q Consensus 706 dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly 767 (811)
++ .++|+|.|.+++|++|.++++ -.++.++..-+..++.+ ..+|-...++.+++-.
T Consensus 417 ~~--al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 417 EA--ALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp TS---EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred Cc--cEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 43 589999999999999998874 36667777777778877 8889888888887643
No 100
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.36 E-value=3.7e-12 Score=113.98 Aligned_cols=92 Identities=26% Similarity=0.486 Sum_probs=84.9
Q ss_pred EEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003552 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (811)
Q Consensus 668 vfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 747 (811)
+++.|+...+++..++|+||||+|+|+++.++..+++.+|..++.++ |++++.++|.. +++||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~----ll~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEY----LLENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHH----HHCCHHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999998 99999999955 4589999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 003552 748 KRIYERYTWKIYSERLMT 765 (811)
Q Consensus 748 ~~v~e~yswe~~a~~ll~ 765 (811)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999998863
No 101
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.35 E-value=2.5e-10 Score=130.32 Aligned_cols=311 Identities=13% Similarity=0.072 Sum_probs=208.9
Q ss_pred CceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 407 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 407 ~PDlIh~h~~~~~lva~lla~~-lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
.-|+|..|+....+++..+.++ ...++.+..|..++. ++++. .+.+-..-...|-.||.|-+-|...
T Consensus 123 ~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs----~eifr--------~LP~r~eil~glL~aDlIGFqt~~y 190 (474)
T PRK10117 123 DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPT----PEIFN--------ALPPHDELLEQLCDYDLLGFQTEND 190 (474)
T ss_pred CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCC----hHHHh--------hCCChHHHHHHHHhCccceeCCHHH
Confidence 3489999999988888777665 346788888976442 23221 1111122345788999999999877
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchH--HHHHhhhhcchhhhccCccccccc
Q 003552 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK--QKRLTALHGSIEQLLFDPEQNDEH 563 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~--~~r~~~~~~~i~~~l~~~~~~~~~ 563 (811)
....-+......... ...+......|- .-++.+.|-|||.+.|...... ..+...+ ++.
T Consensus 191 ~rnFl~~~~~~lg~~--~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~~~~~~l--------------r~~ 251 (474)
T PRK10117 191 RLAFLDCLSNLTRVT--TRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLPPKLAQL--------------KAE 251 (474)
T ss_pred HHHHHHHHHHHcCCc--ccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHHHHHHHH--------------HHH
Confidence 653332222110000 000000000111 2257789999998877432211 1111111 111
Q ss_pred cCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc--
Q 003552 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-- 637 (811)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~----~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~-- 637 (811)
+ .++.+|+.+.|+|..||+..=++||.++.+.+| ++.|+-++- |+.+.-+++.+...++.+++.+.
T Consensus 252 ~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~---psR~~v~~Y~~l~~~v~~~vg~INg 323 (474)
T PRK10117 252 L-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP---TSRGDVQAYQDIRHQLETEAGRING 323 (474)
T ss_pred c-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC---CCCCccHHHHHHHHHHHHHHHHHHh
Confidence 2 356799999999999999999999999887665 577887763 23344455666677777776653
Q ss_pred --CCCCc--EEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCC-----CEEEcCCCCcccccccCC
Q 003552 638 --KLDGQ--FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCHGGPAEIIEHGA 708 (811)
Q Consensus 638 --~L~~~--V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl-----PVIAT~~GG~~EiI~dg~ 708 (811)
|-.+. |+++- ..++.+++..+|+ +||+++.++..+|+-|+..|+.+|-. ..|.|.+.|.++.+.
T Consensus 324 ~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~--- 396 (474)
T PRK10117 324 KYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--- 396 (474)
T ss_pred ccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC---
Confidence 22221 34433 4678999999999 49999999999999999999999965 378899888888873
Q ss_pred cEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003552 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (811)
Q Consensus 709 ~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly 767 (811)
..++++|.|.+++|++|.++++ ..++.+++.-+..++.+ .++|....++.+++-.
T Consensus 397 ~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L 451 (474)
T PRK10117 397 SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDL 451 (474)
T ss_pred CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHH
Confidence 3789999999999999998874 36666777667777777 7889888888887644
No 102
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.25 E-value=1.8e-09 Score=122.81 Aligned_cols=325 Identities=14% Similarity=0.118 Sum_probs=211.1
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHh
Q 003552 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (811)
Q Consensus 395 ~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 473 (811)
....++....+ .=|+|..|+....++...+..+. ..++.+..|..+++. .+ ++.+.+-..-...+-
T Consensus 136 ~FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPss----Ev--------fr~lP~r~eIl~gll 202 (486)
T COG0380 136 KFADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS----EV--------FRCLPWREEILEGLL 202 (486)
T ss_pred HHHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCH----HH--------HhhCchHHHHHHHhh
Confidence 33344444332 33999999999888877777664 457888889865532 21 122222222344688
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceee-eccCCCCCCcEEEecCCCCCCCCCCCchHH---HHHhhhhcc
Q 003552 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV-VHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGS 549 (811)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v-~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~ 549 (811)
.||+|-+.|+......-++..+... ++ +.-.+ ..|.+--..++...|=|+|...|....... .+...+
T Consensus 203 ~~dligFqt~~y~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el--- 274 (486)
T COG0380 203 GADLIGFQTESYARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLEL--- 274 (486)
T ss_pred cCCeeEecCHHHHHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHH---
Confidence 9999999998876643333322210 00 00000 111100023566789999987764322111 111111
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHH
Q 003552 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIA 625 (811)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~----~v~LVIVG~g~~~~~~~d~e~~~ 625 (811)
. +.+ ..++.+|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++.... ..-++++.
T Consensus 275 -~----------~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~ 336 (486)
T COG0380 275 -K----------AEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQA 336 (486)
T ss_pred -H----------HHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHH
Confidence 1 111 2348899999999999999999999999986655 577777776543 22333444
Q ss_pred HHHHHHHHHHHc-CCCCcEEEec--cccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcC----CCEEEcCCC
Q 003552 626 EIEKMHELMKTY-KLDGQFRWIA--AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATCHG 698 (811)
Q Consensus 626 ~~~~l~~li~~~-~L~~~V~flG--~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~G----lPVIAT~~G 698 (811)
...++.+++.+. +..+.+.|.+ +....++..+++.++.. +|+++..++.+|+-++..|+.+|- =|.|-|.+.
T Consensus 337 ~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~-aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFa 415 (486)
T COG0380 337 LRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRA-ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFA 415 (486)
T ss_pred HHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhh-hceeeeccccccccHHHHHHHHhhcCCCCcEEEeccc
Confidence 556666666553 2234443332 11235788999999994 999999999999999999999984 478888888
Q ss_pred CcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 699 GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 699 G~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
|.+..+.+ .++++|.|.+++|++|..++. ..++.+++.-+..++.+ .++|....++.+++-
T Consensus 416 Gaa~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~ 476 (486)
T COG0380 416 GAASELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDD 476 (486)
T ss_pred cchhhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 88777744 799999999999999998874 46677777667777777 788888888886553
No 103
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.25 E-value=3.6e-11 Score=117.66 Aligned_cols=167 Identities=16% Similarity=0.129 Sum_probs=85.3
Q ss_pred CCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccc
Q 003552 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 378 (811)
Q Consensus 299 p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~ 378 (811)
+..||.+.++. +|+++|+++||+|+ |+|....+..... ............
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~------------~~~~~~~~~~~~------ 58 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE------------LVKIFVKIPYPI------ 58 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST------------EEEE---TT-SS------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh------------ccceeeeeeccc------
Confidence 45799999999 77778899999999 9877754432111 011111111000
Q ss_pred cccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccc--cCCCChhhHhhhh
Q 003552 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKT--KYPDSDIYWKKFD 456 (811)
Q Consensus 379 ~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~--k~~~s~~~~~~~~ 456 (811)
.....+.......+.+.+.+. +|||||+|.+.....+....+ ++|.|.+.|+.... ...... ....
T Consensus 59 ----~~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~~---~~~~ 126 (177)
T PF13439_consen 59 ----RKRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSKL---SPYS 126 (177)
T ss_dssp ----TSS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTSC---CCHH
T ss_pred ----ccccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCccccccccccc---chhh
Confidence 011111112333444455544 999999998765444444444 99999999986521 000000 0000
Q ss_pred hhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCC
Q 003552 457 EKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (811)
Q Consensus 457 ~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~ 534 (811)
.... .......+.+|.+||+|...++...+ .|++ +.|+.|||||||.+.|.
T Consensus 127 ~~~~-----~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 127 YLNF-----RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHH-----CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH-
T ss_pred hhhh-----hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHcC
Confidence 0000 11223478999999999987663221 2443 78999999999998773
No 104
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.24 E-value=2.3e-09 Score=131.20 Aligned_cols=311 Identities=14% Similarity=0.131 Sum_probs=206.3
Q ss_pred eEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHh
Q 003552 409 DFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (811)
Q Consensus 409 DlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (811)
|+|..|+....++...+.++. ..++.+..|..++. +.++ +.+..-..-+..|-.||.|-+.|+....
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs----~eif--------r~LP~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS----SEIY--------KTLPIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCC----hHHH--------hhCCcHHHHHHHHhcCCeEEecCHHHHH
Confidence 899999999888888777654 57888999976542 2322 2222222344578899999999988765
Q ss_pred hccccccccccccccccccceeeeccCCCCC--CcEEEecCCCCCCCCCCCc---hHHHHHhhhhcchhhhccCcccccc
Q 003552 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYS---EKQKRLTALHGSIEQLLFDPEQNDE 562 (811)
Q Consensus 488 ~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~--~k~~VIpnGvD~~~f~p~~---~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (811)
..-....+.... ..... +...|+.+.. -++.+.|-|||...|.... +...+...+ ++
T Consensus 271 ~Fl~~~~r~lgl-~~~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l--------------~~ 332 (854)
T PLN02205 271 HFLSCCSRMLGL-SYESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKEL--------------IK 332 (854)
T ss_pred HHHHHHHHHhCC-cccCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHH--------------HH
Confidence 332221111000 00000 0001222222 2567899999988774321 111222111 11
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY- 637 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~- 637 (811)
.++ ++++.+|+.+.|+|..||+..=+.||.++.+.+|+ +.|+-+.-.. .+.-.++.+...++.+++.+.
T Consensus 333 ~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~ps---r~~~~~y~~~~~ev~~~v~rIN 406 (854)
T PLN02205 333 QFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPA---RGKGKDVKEVQAETHSTVKRIN 406 (854)
T ss_pred Hhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCC---CcccHHHHHHHHHHHHHHHHHH
Confidence 222 24678999999999999999999999999876664 5777776432 233445555666666666653
Q ss_pred ---CCCC--cEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCC-------------------CEE
Q 003552 638 ---KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-------------------PTF 693 (811)
Q Consensus 638 ---~L~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl-------------------PVI 693 (811)
|-.+ -|+++- ..++..++..+|+ +||+++.++..+|+-|+..|+.+|-. ..|
T Consensus 407 ~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLi 482 (854)
T PLN02205 407 ETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLV 482 (854)
T ss_pred hhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccccccccccCCCCceE
Confidence 3222 356654 3678999999999 59999999999999999999999854 367
Q ss_pred EcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 694 AT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
.|.+.|.+..+. ..++|+|.|.+++|++|.+++. ..++.++..-+..++++ .+++-...++.++.-
T Consensus 483 LSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~ 548 (854)
T PLN02205 483 VSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGYWARSFLQD 548 (854)
T ss_pred eeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 788877777663 3789999999999999998874 35555555556667777 788888888887653
No 105
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.22 E-value=8.6e-09 Score=115.09 Aligned_cols=248 Identities=15% Similarity=0.118 Sum_probs=139.9
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHH
Q 003552 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (811)
+.+||+||++....+..+.++++.+++|+++.-.+... . .+.++....|+.|+++-+.
T Consensus 89 ~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~------g----------------~~nr~~~~~a~~v~~~f~~ 146 (352)
T PRK12446 89 KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP------G----------------LANKIALRFASKIFVTFEE 146 (352)
T ss_pred hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc------c----------------HHHHHHHHhhCEEEEEccc
Confidence 45999999987777777889999999997653221100 0 1123567788888775432
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccccccc
Q 003552 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (811)
Q Consensus 485 ~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (811)
... +++ .+|+.++-|.+..+...+..... ++.+
T Consensus 147 ~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~~~~--------------------~~~~ 179 (352)
T PRK12446 147 AAK-------------------------HLP--KEKVIYTGSPVREEVLKGNREKG--------------------LAFL 179 (352)
T ss_pred hhh-------------------------hCC--CCCeEEECCcCCcccccccchHH--------------------HHhc
Confidence 111 122 35677777766654432221111 1234
Q ss_pred CCCCCCCCCEEEEEeccCccCCHHH-HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003552 565 GTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (811)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgi~~-LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 643 (811)
|+ ++++++|+.+|.-.-.+.+.. +.+++..+. ++++++++-|..+ .++ ....+ .++
T Consensus 180 ~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~~------------~~~---~~~~~---~~~ 236 (352)
T PRK12446 180 GF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKGN------------LDD---SLQNK---EGY 236 (352)
T ss_pred CC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCch------------HHH---HHhhc---CCc
Confidence 54 456777777765444555643 334555443 2477766655322 111 11111 123
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-----C----cccccccCCcEEEEC
Q 003552 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-----G----PAEIIEHGASGFHID 714 (811)
Q Consensus 644 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G-----G----~~EiI~dg~~G~li~ 714 (811)
...++. .+++..+|+. ||++|.- +-+.|+.|++++|+|.|..... + ..+.+.+-..|..+.
T Consensus 237 ~~~~f~-----~~~m~~~~~~-adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~ 306 (352)
T PRK12446 237 RQFEYV-----HGELPDILAI-TDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLY 306 (352)
T ss_pred EEecch-----hhhHHHHHHh-CCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcc
Confidence 334422 2467788885 9998874 4488999999999999987432 1 233444555566664
Q ss_pred CC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 715 PY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 715 p~--D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
.. +++.+++.+.+ +++|++.+++ + .+++.....++++.++
T Consensus 307 ~~~~~~~~l~~~l~~----ll~~~~~~~~---~-----~~~~~~~~aa~~i~~~ 348 (352)
T PRK12446 307 EEDVTVNSLIKHVEE----LSHNNEKYKT---A-----LKKYNGKEAIQTIIDH 348 (352)
T ss_pred hhcCCHHHHHHHHHH----HHcCHHHHHH---H-----HHHcCCCCHHHHHHHH
Confidence 32 45677777754 4478766532 1 1334555555555443
No 106
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.22 E-value=2.1e-08 Score=111.84 Aligned_cols=240 Identities=17% Similarity=0.196 Sum_probs=150.5
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHH
Q 003552 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (811)
..+||+|++........+.++++.+|+|+++.-.+.-. ..-|+ +..+.|+.|.+.-..
T Consensus 89 ~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank----------------~~~~~a~~V~~~f~~ 146 (357)
T COG0707 89 KLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK----------------ILSKFAKKVASAFPK 146 (357)
T ss_pred HcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH----------------HhHHhhceeeecccc
Confidence 34999999988877788888999999998865444321 22222 234456666554322
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCcccccccc
Q 003552 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (811)
Q Consensus 485 ~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (811)
. . .+++ +.++.++-|.+..++.. ......+. .
T Consensus 147 ~-~------------------------~~~~--~~~~~~tG~Pvr~~~~~-~~~~~~~~--------------------~ 178 (357)
T COG0707 147 L-E------------------------AGVK--PENVVVTGIPVRPEFEE-LPAAEVRK--------------------D 178 (357)
T ss_pred c-c------------------------ccCC--CCceEEecCcccHHhhc-cchhhhhh--------------------h
Confidence 1 0 1122 55777888877766554 22211111 1
Q ss_pred CCCCCCCCCEEEEEeccCccCCHHHHHH-HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003552 565 GTLSDRSKPIVFSMARLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (811)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgi~~Lle-A~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 643 (811)
+ ..++++|+.+|.---.+.+..++. +...+.+ +++++...+... .++++..-.+++. +
T Consensus 179 ~---~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~---~~~v~~~~G~~~------------~~~~~~~~~~~~~---~ 237 (357)
T COG0707 179 G---RLDKKTILVTGGSQGAKALNDLVPEALAKLAN---RIQVIHQTGKND------------LEELKSAYNELGV---V 237 (357)
T ss_pred c---cCCCcEEEEECCcchhHHHHHHHHHHHHHhhh---CeEEEEEcCcch------------HHHHHHHHhhcCc---E
Confidence 1 125677777765444444554444 3334432 577776666543 3445455555444 7
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC--------cccccccCCcEEEECC
Q 003552 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHIDP 715 (811)
Q Consensus 644 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG--------~~EiI~dg~~G~li~p 715 (811)
+..++.. ++..+|+. +|++|.= +-++|+-|+.++|+|+|--..+. ++..+++-..|..++-
T Consensus 238 ~v~~f~~------dm~~~~~~-ADLvIsR----aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~ 306 (357)
T COG0707 238 RVLPFID------DMAALLAA-ADLVISR----AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQ 306 (357)
T ss_pred EEeeHHh------hHHHHHHh-ccEEEeC----CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecc
Confidence 7776433 48888885 9999974 44899999999999999865443 3444556667777765
Q ss_pred CC--HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003552 716 YH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (811)
Q Consensus 716 ~D--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 750 (811)
.+ ++.+++.|.+++ ++|+..++|++++++..
T Consensus 307 ~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 307 SELTPEKLAELILRLL----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred ccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 55 778777775554 89999999999988775
No 107
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.20 E-value=3.4e-11 Score=115.80 Aligned_cols=160 Identities=18% Similarity=0.263 Sum_probs=84.2
Q ss_pred ccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCcccccccccccc
Q 003552 302 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWIS 381 (811)
Q Consensus 302 GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~is 381 (811)
||.+.|+. +|+++|.++||+|+ |+|...+... .... ..++.+.++|.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchh------
Confidence 79999999 77778899999999 9986643321 1111 23578888887654210
Q ss_pred ccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhh
Q 003552 382 RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHF 461 (811)
Q Consensus 382 r~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f 461 (811)
...+. +...+.+.+ .....+||+||+|++..++++.++++..++|+|+++|+...... ..|.. ..+
T Consensus 54 -~~~~~----~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~--~~~-- 119 (160)
T PF13579_consen 54 -LRLLR----FLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKR--RLY-- 119 (160)
T ss_dssp -GGHCC----HHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH--HHH--
T ss_pred -hhhHH----HHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchhh--HHH--
Confidence 01111 112222222 22367999999999766677777666889999999998542211 11111 111
Q ss_pred hhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCC
Q 003552 462 SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 527 (811)
Q Consensus 462 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnG 527 (811)
. ..+...++.||.|+++|....+... . .|++ .+|+.|||||
T Consensus 120 -~--~~~~~~~~~ad~vi~~S~~~~~~l~-------------------~-~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 120 -R--WLERRLLRRADRVIVVSEAMRRYLR-------------------R-YGVP--PDRIHVIPNG 160 (160)
T ss_dssp -H--HHHHHHHHH-SEEEESSHHHHHHHH-------------------H-H-----GGGEEE----
T ss_pred -H--HHHHHHHhcCCEEEECCHHHHHHHH-------------------H-hCCC--CCcEEEeCcC
Confidence 1 2256789999999999998866221 1 2443 7899999998
No 108
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.10 E-value=1.4e-08 Score=116.19 Aligned_cols=144 Identities=10% Similarity=0.126 Sum_probs=110.7
Q ss_pred CCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003552 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (811)
Q Consensus 572 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (811)
+.-+++++. +..++++.++.+..|++.|-| |.+.+ ...+|.++ +++ ++.+.+.|..
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~-- 337 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNIT-- 337 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcC--
Confidence 334666662 899999999999899999999 66544 12577777 776 5656666633
Q ss_pred cCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCC-CCcccccccCCcEEEECCCCHHHHHHHHHHHHH
Q 003552 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~-GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~ 730 (811)
...+-..+.+ ||+++-.|..|+|++++.||++.|+|+++.+. -|+.+++.+ |.+++++|+++|+++|.+.+
T Consensus 338 ---~~~l~~ly~~-~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL- 409 (438)
T TIGR02919 338 ---TQKIQELYQT-CDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL- 409 (438)
T ss_pred ---hHHHHHHHHh-ccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh-
Confidence 3356666665 99999999999999999999999999999754 367788866 88999999999999997665
Q ss_pred hhcCCHHHHHHHHHHHHHHH
Q 003552 731 KCKENPSHWKKISDGGLKRI 750 (811)
Q Consensus 731 ~l~~dp~~~~~ms~~a~~~v 750 (811)
+||+.+++.-..-++.+
T Consensus 410 ---~d~~~~~~~~~~q~~~a 426 (438)
T TIGR02919 410 ---NDPNQFRELLEQQREHA 426 (438)
T ss_pred ---cCHHHHHHHHHHHHHHh
Confidence 89987776544444443
No 109
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.06 E-value=3.3e-08 Score=111.59 Aligned_cols=151 Identities=13% Similarity=0.053 Sum_probs=91.9
Q ss_pred CCCCEEEEEeccCc---cCCHHHHHHHHHHhhccCCCeEEEE-EeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003552 570 RSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (811)
Q Consensus 570 ~~k~iIl~vGRL~~---~Kgi~~LleA~~~l~~~~~~v~LVI-VG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (811)
.+++++++.|+... .+-...+++++..+ +.++++ +|.... .. ..+.++|.+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~-------------~~-------~~~~~~v~~ 292 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL-------------GA-------EDLPDNVRV 292 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc-------------cc-------cCCCCceEE
Confidence 45677888898854 33445555666543 345444 444333 00 245688999
Q ss_pred eccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----cccccccCCcEEEECCC--CHH
Q 003552 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPD 719 (811)
Q Consensus 646 lG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG----~~EiI~dg~~G~li~p~--D~e 719 (811)
.+ .++..+++ . .+|++|.- +-..|+.||+++|+|+|....++ ..+.+.....|..+++. +.+
T Consensus 293 ~~----~~p~~~ll---~-~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWLL---P-RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHHh---h-hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 56665554 4 49999954 33579999999999999986655 35555566678877665 578
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003552 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 763 (811)
Q Consensus 720 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~l 763 (811)
++++++.+++ +++ .+++..+.+.+. .+.-..+..++.+
T Consensus 361 ~l~~al~~~l----~~~-~~~~~~~~~~~~-~~~~g~~~~~~~i 398 (401)
T cd03784 361 RLAAALRRLL----DPP-SRRRAAALLRRI-REEDGVPSAADVI 398 (401)
T ss_pred HHHHHHHHHh----CHH-HHHHHHHHHHHH-HhccCHHHHHHHH
Confidence 8888885554 543 444444333322 2333444444433
No 110
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.98 E-value=1.1e-08 Score=103.28 Aligned_cols=182 Identities=18% Similarity=0.153 Sum_probs=117.2
Q ss_pred cceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeec
Q 003552 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (811)
Q Consensus 278 ~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~ 357 (811)
+.||+||...|.|.. -||.|+.+. +|+.+|+++||+|+ |.|+....... ..
T Consensus 1 mkkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~~---------~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPYK---------EF 51 (185)
T ss_pred CceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCCC---------Cc
Confidence 368999999999864 599999999 88889999999999 99886322110 12
Q ss_pred CccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC-chHHHHHHHH--HcCCcEE
Q 003552 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD-GNLVASLLAY--KMGITQC 434 (811)
Q Consensus 358 ~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~-~~lva~lla~--~lgvp~v 434 (811)
...+++++.+|.....+ .....|--.....++..+.. -+.+.||||.+... ++++..++.+ +.|.|++
T Consensus 52 ~y~gv~l~~i~~~~~g~--------~~si~yd~~sl~~al~~~~~-~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~ 122 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------AESIIYDFLSLLHALRFIKQ-DKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVV 122 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------hHHHHHHHHHHHHHHHHHhh-ccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEE
Confidence 33478999988754311 11111111111111111111 12357899987766 5555555443 3477999
Q ss_pred EEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003552 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (811)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi 514 (811)
+..|++|.. +.+|..+...|.. ..|.++.+.||.+|+-|....+-.++. |
T Consensus 123 vN~DGlEWk-----R~KW~~~~k~~lk----~~E~~avk~ad~lIaDs~~I~~y~~~~---y------------------ 172 (185)
T PF09314_consen 123 VNMDGLEWK-----RAKWGRPAKKYLK----FSEKLAVKYADRLIADSKGIQDYIKER---Y------------------ 172 (185)
T ss_pred ECCCcchhh-----hhhcCHHHHHHHH----HHHHHHHHhCCEEEEcCHHHHHHHHHH---c------------------
Confidence 999998763 3467666655542 347789999999999998765522221 1
Q ss_pred CCCCCcEEEecCCCC
Q 003552 515 DVFDPKFNIVSPGAD 529 (811)
Q Consensus 515 ~~~~~k~~VIpnGvD 529 (811)
+ ..+..+||+|.|
T Consensus 173 ~--~~~s~~IaYGad 185 (185)
T PF09314_consen 173 G--RKKSTFIAYGAD 185 (185)
T ss_pred C--CCCcEEecCCCC
Confidence 1 367889999987
No 111
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.90 E-value=1.3e-06 Score=98.77 Aligned_cols=111 Identities=17% Similarity=0.187 Sum_probs=74.0
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----cccccccCCcEEEEC
Q 003552 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHID 714 (811)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG----~~EiI~dg~~G~li~ 714 (811)
+.++|.+.+ .++..+ +++ .+|++|..+ | ..|+.||+++|+|+|+....+ +...+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457898887 555544 455 499999763 2 348999999999999975443 334455556787776
Q ss_pred CC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 715 PY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 715 p~--D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
.. ++++++++|.+++ +|+++++++.+- .+.+...-.-+..++.++++
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM-RAEIREAGGARRAADEIEGF 389 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHh
Confidence 43 4678888885554 888876665443 33444555667777666654
No 112
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.86 E-value=8.1e-09 Score=109.61 Aligned_cols=183 Identities=14% Similarity=0.117 Sum_probs=100.9
Q ss_pred eEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcc-ccceeee--
Q 003552 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERV-- 356 (811)
Q Consensus 280 rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~-~~~~e~i-- 356 (811)
||++||.-..| -..+||...++. .|+++|+++||+|. |+++.+........ .......
T Consensus 1 kIl~vt~E~~P-------~~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAP-------FAKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTT-------TB-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCc-------ccccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 79999987753 247899999998 77778899999999 99887632211100 0000000
Q ss_pred --------c----------CccCeEEEEecCccccccccccccccCch-------h-hHHH---HHHHHHHHHHHHcCCC
Q 003552 357 --------S----------GTEHTHILRVPFRSEKGILRQWISRFDVW-------P-YLET---FTEDVGSEITAELQGF 407 (811)
Q Consensus 357 --------~----------~~~~v~Ilrvp~~~~~~~~~~~isr~~i~-------~-~l~~---f~~~~~~~i~~~~~~~ 407 (811)
. ...++.++-+.-.. +.+|..++ + ..++ |...++. +...+..+
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le-~~~~l~~~ 133 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALE-LLKKLGWK 133 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHH-HHCTCT-S
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHH-HHHhhCCC
Confidence 0 00133333322111 11122222 1 1222 3333333 33334569
Q ss_pred ceEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCccccCCCC------hhhHhh--hhhhhhhhhhhhHHHHHH
Q 003552 408 PDFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDS------DIYWKK--FDEKYHFSCQFTADLIAM 472 (811)
Q Consensus 408 PDlIh~h~~~~~lva~lla~~l-------gvp~v~t~H~l~~~k~~~s------~~~~~~--~~~~y~f~~~~~~e~~a~ 472 (811)
|||||+|+|.+++++.+++... ++|+|+|+|+++.+..-.. .+.+.. ....+.+...+...+.++
T Consensus 134 pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi 213 (245)
T PF08323_consen 134 PDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGI 213 (245)
T ss_dssp -SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHH
T ss_pred CCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHH
Confidence 9999999999999998888776 5999999999765432211 111111 112233344556677899
Q ss_pred hhCCEEEecCHHHHhhc
Q 003552 473 NNADFIITSTYQEIAGT 489 (811)
Q Consensus 473 ~~AD~IIt~S~~~~~~~ 489 (811)
..||.|+|+|+..++..
T Consensus 214 ~~AD~v~TVS~~Ya~Ei 230 (245)
T PF08323_consen 214 VYADKVTTVSPTYAREI 230 (245)
T ss_dssp HHSSEEEESSHHHHHHT
T ss_pred HhcCEeeeCCHHHHHHH
Confidence 99999999999887643
No 113
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.81 E-value=4.8e-07 Score=98.81 Aligned_cols=115 Identities=17% Similarity=0.214 Sum_probs=79.3
Q ss_pred CCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003552 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (811)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 649 (811)
+.+.+++++|..+.. .++++++++ ++..++++|.... + .-.++|++.++
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~---------------------~-~~~~ni~~~~~- 239 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA---------------------D-PRPGNIHVRPF- 239 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc---------------------c-ccCCCEEEeec-
Confidence 456689999988775 667777765 5788999976532 0 01578998863
Q ss_pred cCcCChHHHHHHHHccccEEEecCCCCCCCH-HHHHHHHcCCCEEEcCCCCccc------ccccCCcEEEECCC--CHHH
Q 003552 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGL-TVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHIDPY--HPDQ 720 (811)
Q Consensus 650 ~~~v~~~el~~~ia~aadvfV~PS~~E~fGl-tvlEAMa~GlPVIAT~~GG~~E------iI~dg~~G~li~p~--D~e~ 720 (811)
...++.++|+. ||++|.-+ |. |+.||+++|+|++.-...+..| .++.-+.|..+++. +++.
T Consensus 240 ----~~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 240 ----STPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred ----ChHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 33578889995 99999652 44 5999999999999987655333 33444567676543 4566
Q ss_pred HHHHH
Q 003552 721 AAELM 725 (811)
Q Consensus 721 lA~aI 725 (811)
+++.|
T Consensus 310 l~~~l 314 (318)
T PF13528_consen 310 LAEFL 314 (318)
T ss_pred HHHHH
Confidence 66666
No 114
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.77 E-value=3e-06 Score=96.21 Aligned_cols=165 Identities=14% Similarity=0.212 Sum_probs=105.0
Q ss_pred CCCEE-EEEeccC--ccCCHHHHHHHHHHhhccCCCeEEEEEe-CcCCCCCCcchHHHHHHHHHHHHHHHcCCC------
Q 003552 571 SKPIV-FSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKLD------ 640 (811)
Q Consensus 571 ~k~iI-l~vGRL~--~~Kgi~~LleA~~~l~~~~~~v~LVIVG-~g~~~~~~~d~e~~~~~~~l~~li~~~~L~------ 640 (811)
+++.| +.-|.-. -.+++..+++++..+.+. +++.+++.- ++.+ .+.+++..++.+..
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~~ 270 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSSE 270 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCcc
Confidence 34444 4444432 256788999999999765 678887765 4444 34455555554443
Q ss_pred --------CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc---cccccc---
Q 003552 641 --------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP---AEIIEH--- 706 (811)
Q Consensus 641 --------~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~---~EiI~d--- 706 (811)
+++.+.. ...+++.+++. ||++|..| |.+..|++++|+|+|.....+. ..+.+.
T Consensus 271 ~~~~~~~~~~~~v~~------~~~~~~~~l~~-ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~ 338 (396)
T TIGR03492 271 DQTSLFQKGTLEVLL------GRGAFAEILHW-ADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSR 338 (396)
T ss_pred ccchhhccCceEEEe------chHhHHHHHHh-CCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHh
Confidence 1244443 13467888884 99999874 4555999999999999874433 222232
Q ss_pred --CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003552 707 --GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (811)
Q Consensus 707 --g~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~ 765 (811)
| .+..+...+++.+++.+.++ ++|++.+++|.++++++..+....+.+++.+.+
T Consensus 339 l~g-~~~~l~~~~~~~l~~~l~~l----l~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 339 LLG-GSVFLASKNPEQAAQVVRQL----LADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred hcC-CEEecCCCCHHHHHHHHHHH----HcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3 34555566788888888554 489999988886666555444555555555443
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.75 E-value=1.3e-06 Score=98.03 Aligned_cols=266 Identities=17% Similarity=0.163 Sum_probs=148.3
Q ss_pred CCceEEEEcC-CCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHH
Q 003552 406 GFPDFIIGNY-SDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (811)
Q Consensus 406 ~~PDlIh~h~-~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (811)
.+||+|.++. ....+.++++|..+++|+++ +|+-..+.. . .+... -...-+-|+..+++|..
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~~---~-----~eE~~--------r~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTEG---A-----IDESI--------RHAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCCC---C-----chHHH--------HHHHHHHHhhccCCCHH
Confidence 4899999887 44578889999999999875 444332210 0 11111 11223456777788876
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEe-cCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccc
Q 003552 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (811)
Q Consensus 485 ~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VI-pnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 563 (811)
..+. ...-|++ +.++.++ .+++|.-......... +..+.
T Consensus 155 ~~~~--------------------L~~eg~~--~~~i~~tG~~~iD~l~~~~~~~~~------------------~~~~~ 194 (365)
T TIGR03568 155 YRQR--------------------VIQMGED--PDRVFNVGSPGLDNILSLDLLSKE------------------ELEEK 194 (365)
T ss_pred HHHH--------------------HHHcCCC--CCcEEEECCcHHHHHHhhhccCHH------------------HHHHH
Confidence 5441 1112443 5566666 4466643322111111 11133
Q ss_pred cCCCCCCC-CCEEEEEeccC--ccCCHHHHHHHHHHhhccCCCeEEEEEe--CcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003552 564 VGTLSDRS-KPIVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVA--GYIDVNKSKDREEIAEIEKMHELMKTYK 638 (811)
Q Consensus 564 ~g~l~~~~-k~iIl~vGRL~--~~Kgi~~LleA~~~l~~~~~~v~LVIVG--~g~~~~~~~d~e~~~~~~~l~~li~~~~ 638 (811)
+|+ +.+ +.+++.+-+-. .....+.+.+.+..+.+...++ +++. .++. +....+.+.++..+
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~--------~~~i~~~i~~~~~~-- 260 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAG--------SRIINEAIEEYVNE-- 260 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCC--------chHHHHHHHHHhcC--
Confidence 554 333 34445555433 3333344444444443332234 3443 2222 11112233333211
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCH
Q 003552 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (811)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~ 718 (811)
.++|++++ ..+..++..+++. |+++|--|- | .+.||.++|+|||+ .|.-.|.++.|.+++++ +.|+
T Consensus 261 -~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~ 326 (365)
T TIGR03568 261 -HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDK 326 (365)
T ss_pred -CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCH
Confidence 46799998 7889999999996 999885432 2 34899999999995 45677888888888888 5689
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 719 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
+++.+++.++ .+++.++.+ ......|.....++++.++
T Consensus 327 ~~I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 327 EEIVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 9998888653 244433332 1222346666666666553
No 116
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.73 E-value=1.1e-05 Score=89.91 Aligned_cols=157 Identities=13% Similarity=0.143 Sum_probs=116.5
Q ss_pred CCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC----------
Q 003552 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG---------- 641 (811)
Q Consensus 572 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~---------- 641 (811)
+++++..+..+ .--+.+++++..+++.+|++.+++|=..|+ ..+.+++++++.|+.-
T Consensus 231 r~v~iaaSTH~--GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~rS~~~~~~ 297 (419)
T COG1519 231 RPVWVAASTHE--GEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTRRSQGDPPF 297 (419)
T ss_pred CceEEEecCCC--chHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEeecCCCCCC
Confidence 77888887722 233568899999999999999999988876 4778888999988731
Q ss_pred --cEEEeccccCcCChHHHHHHHHccccE-EEecCCCCCCCHHHHHHHHcCCCEEEcCC-CCcccc---cccCCcEEEEC
Q 003552 642 --QFRWIAAQTNRARNGELYRYIADTKGA-FVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEI---IEHGASGFHID 714 (811)
Q Consensus 642 --~V~flG~~~~~v~~~el~~~ia~aadv-fV~PS~~E~fGltvlEAMa~GlPVIAT~~-GG~~Ei---I~dg~~G~li~ 714 (811)
.=.++| -+.+|+..+|.- +|+ ||--|+.+--|--++|+.++|+|||.-.. -...|+ +...+.|+.++
T Consensus 298 ~~tdV~l~-----DtmGEL~l~y~~-adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~ 371 (419)
T COG1519 298 SDTDVLLG-----DTMGELGLLYGI-ADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE 371 (419)
T ss_pred CCCcEEEE-----ecHhHHHHHHhh-ccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC
Confidence 112333 257899999984 786 77778877668889999999999999632 233333 34455678886
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 003552 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (811)
Q Consensus 715 p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~ 753 (811)
|.+.+++++ +.+..|++.++++++++...+.++
T Consensus 372 --~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 372 --DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQN 404 (419)
T ss_pred --CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 566666666 556688999999999999988543
No 117
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.57 E-value=1e-06 Score=84.23 Aligned_cols=123 Identities=21% Similarity=0.221 Sum_probs=78.9
Q ss_pred HHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHH
Q 003552 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 397 (811)
Q Consensus 318 ~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~ 397 (811)
.+++.|+++|++|+ ++|..... +......++.+.+++... ...++++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~-----------k~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPR-----------KSPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCC-----------CccHHHHH-HH-HHH
Confidence 67778899999999 99874221 111123467888876431 12444543 22 444
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcC-CcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhC
Q 003552 398 SEITAELQGFPDFIIGNYSDG-NLVASLLAYKMG-ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (811)
Q Consensus 398 ~~i~~~~~~~PDlIh~h~~~~-~lva~lla~~lg-vp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~A 475 (811)
+.+. ..+|||||+|...+ ++++.++++..+ +|++++.|+..... .+. ..+ .+.+ ....+++.|
T Consensus 68 k~ik---~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~~-~~~----~~~~-----~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIK---KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SSK-KKK----LKKF-----IIKFAFKRA 132 (139)
T ss_pred HHhc---cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CCc-hHH----HHHH-----HHHHHHHhC
Confidence 4444 34899999999886 788888889998 99999999864422 111 110 1111 244688999
Q ss_pred CEEEecC
Q 003552 476 DFIITST 482 (811)
Q Consensus 476 D~IIt~S 482 (811)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
No 118
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.51 E-value=9.5e-06 Score=89.39 Aligned_cols=69 Identities=13% Similarity=0.090 Sum_probs=51.3
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCccc------ccccCCcEEEE
Q 003552 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHI 713 (811)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~E------iI~dg~~G~li 713 (811)
.+++.+.+ ..+ .++..+++. +|++|.-+- ..|+.||+++|+|++.....+..| .+++...|..+
T Consensus 228 ~~~v~~~~----~~~-~~~~~~l~~-ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRR----ITT-DNFKELIKN-AELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEE----CCh-HHHHHHHHh-CCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 46788887 333 578888885 999998753 247999999999999987765333 45566678888
Q ss_pred CCCCH
Q 003552 714 DPYHP 718 (811)
Q Consensus 714 ~p~D~ 718 (811)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 76666
No 119
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.40 E-value=0.0002 Score=83.98 Aligned_cols=138 Identities=14% Similarity=-0.004 Sum_probs=89.6
Q ss_pred CCEEEEEeccCc-----cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003552 572 KPIVFSMARLDH-----VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (811)
Q Consensus 572 k~iIl~vGRL~~-----~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 646 (811)
.+++++.|.... .+-+..+++|++++ + .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 478899998753 23345666777655 2 46666655433 00 2457889988
Q ss_pred ccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC----CcccccccCCcEEEECCC--CHHH
Q 003552 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHIDPY--HPDQ 720 (811)
Q Consensus 647 G~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G----G~~EiI~dg~~G~li~p~--D~e~ 720 (811)
+ +++..++... . .+++||.- |-..++.||+.+|+|+|+-... ..+..++.-+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 7 6777666531 1 37888864 3356899999999999997443 355555566678888765 4567
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 003552 721 AAELMADFFGKCKENPSHWKKISDGGLK 748 (811)
Q Consensus 721 lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 748 (811)
+.++|.+ +++||++++...+-+..
T Consensus 422 l~~ai~~----vl~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 422 LVLAIVD----VIENPKYRKNLKELRHL 445 (507)
T ss_pred HHHHHHH----HhCCHHHHHHHHHHHHH
Confidence 7777754 44888877665544443
No 120
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.33 E-value=1.6e-05 Score=91.03 Aligned_cols=185 Identities=12% Similarity=0.095 Sum_probs=119.5
Q ss_pred cccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003552 558 EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (811)
Q Consensus 558 ~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~ 637 (811)
...|..+|+ +.+..++++..++ .|=-+..++++.++.+.-|+.+|++...... ..+.+.+.+.++
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAH 337 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHT
T ss_pred ccCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHc
Confidence 456788998 5666666666655 4555788888888888889999998875432 135788888999
Q ss_pred CCC-CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCccccc------ccCCcE
Q 003552 638 KLD-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII------EHGASG 710 (811)
Q Consensus 638 ~L~-~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI------~dg~~G 710 (811)
|+. ++|.|.+ ..+..+-.+.+.. +|+++=|-.+-| |.|.+||+.+|+|||+-.-.....-+ .-|-.-
T Consensus 338 Gv~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~E 411 (468)
T PF13844_consen 338 GVDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPE 411 (468)
T ss_dssp TS-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GG
T ss_pred CCChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCch
Confidence 996 7899988 5556677777774 999998855544 89999999999999986433222211 112222
Q ss_pred EEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 003552 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER--YTWKIYSERLMTLAGV 769 (811)
Q Consensus 711 ~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~--yswe~~a~~ll~Ly~~ 769 (811)
++. .|.++..+.-.+ +.+|++.++.+.++-++...+. |+-+.+++.+++.|+.
T Consensus 412 lIA--~s~~eYv~~Av~----La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 412 LIA--DSEEEYVEIAVR----LATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp GB---SSHHHHHHHHHH----HHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred hcC--CCHHHHHHHHHH----HhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 333 377888776644 4489999999999988776544 9999999999999875
No 121
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.32 E-value=7.3e-05 Score=80.98 Aligned_cols=97 Identities=14% Similarity=0.248 Sum_probs=70.5
Q ss_pred CCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003552 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (811)
Q Consensus 572 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LV-IVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (811)
+.+++++|..++.+....+++++.++. +++++. |+|.+.. ..+++++.++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 468999999999776678888887653 344443 5555432 145566666553 47888873
Q ss_pred CcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCC
Q 003552 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH 697 (811)
Q Consensus 651 ~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~ 697 (811)
..++..+|+. +|++|.+ .|.|+.|++++|+|+|+...
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3468889995 9999984 57999999999999998754
No 122
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.20 E-value=7.9e-05 Score=83.25 Aligned_cols=270 Identities=16% Similarity=0.186 Sum_probs=139.2
Q ss_pred CceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHH
Q 003552 407 FPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (811)
Q Consensus 407 ~PDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (811)
+||+|..+.-. ..+.++++|..+++|+++.--++-..... .. ..+...+ ..+=+-||.-+|+|...
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~-~g----~~de~~R--------~~i~~la~lhf~~t~~~ 133 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRT-EG----MPDEINR--------HAIDKLAHLHFAPTEEA 133 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-TT-SS----TTHHHHH--------HHHHHH-SEEEESSHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccccC-CC----Cchhhhh--------hhhhhhhhhhccCCHHH
Confidence 99999877644 36788999999999966544332111100 00 1122111 12345699999999876
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecC-CCCCCCCCCCchHHHHHhhhhcchhhhccCcccccccc
Q 003552 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (811)
Q Consensus 486 ~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (811)
.+. ...-|++ +.++.++-| ++|.-. .......+... ..
T Consensus 134 ~~~--------------------L~~~G~~--~~rI~~vG~~~~D~l~--------~~~~~~~~~~~-----------~~ 172 (346)
T PF02350_consen 134 RER--------------------LLQEGEP--PERIFVVGNPGIDALL--------QNKEEIEEKYK-----------NS 172 (346)
T ss_dssp HHH--------------------HHHTT----GGGEEE---HHHHHHH--------HHHHTTCC-HH-----------HH
T ss_pred HHH--------------------HHhcCCC--CCeEEEEChHHHHHHH--------HhHHHHhhhhh-----------hH
Confidence 552 1223554 778887754 233210 00000000000 00
Q ss_pred CCCC-CCCCCEEEEEeccCc---cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003552 565 GTLS-DRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (811)
Q Consensus 565 g~l~-~~~k~iIl~vGRL~~---~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (811)
+++. .+++.++++.=|... ......+.+++..+.+. +++.+++.....+ .....+.+.++++
T Consensus 173 ~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~~~--- 238 (346)
T PF02350_consen 173 GILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLKKY--- 238 (346)
T ss_dssp HHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHTT----
T ss_pred HHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhccc---
Confidence 1111 234445555544433 34567888888888776 6888888887443 2244455555554
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHH-HHHHcCCCEEEcC-CCCcccccccCCcEEEECCCCH
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV-EAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHP 718 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvl-EAMa~GlPVIAT~-~GG~~EiI~dg~~G~li~p~D~ 718 (811)
++++++. .+...+...+++. |+++|-= .| .+. ||.++|+|||.-+ .|--.+-+..|.+-+ +. .|.
T Consensus 239 ~~v~~~~----~l~~~~~l~ll~~-a~~vvgd-----Ss-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~ 305 (346)
T PF02350_consen 239 DNVRLIE----PLGYEEYLSLLKN-ADLVVGD-----SS-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDP 305 (346)
T ss_dssp TTEEEE--------HHHHHHHHHH-ESEEEES-----SH-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSH
T ss_pred CCEEEEC----CCCHHHHHHHHhc-ceEEEEc-----Cc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCH
Confidence 3899997 7788999999996 8887743 25 677 9999999999984 455566666665544 75 689
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003552 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (811)
Q Consensus 719 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~L 766 (811)
+++.++|.+++ .+++.+.++.. ...-|.=...++++.++
T Consensus 306 ~~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~ 344 (346)
T PF02350_consen 306 EAIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEI 344 (346)
T ss_dssp HHHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHH
T ss_pred HHHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHh
Confidence 99999996665 45454444321 12345545555555554
No 123
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.14 E-value=0.0004 Score=77.05 Aligned_cols=275 Identities=17% Similarity=0.186 Sum_probs=143.1
Q ss_pred HHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHH
Q 003552 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 397 (811)
Q Consensus 318 ~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~ 397 (811)
.+.++|.++||+|. |.||...... .+-...+ +....+--.. ......+.....+..
T Consensus 18 ~~I~eL~~~GheV~----it~R~~~~~~------~LL~~yg---~~y~~iG~~g-----------~~~~~Kl~~~~~R~~ 73 (335)
T PF04007_consen 18 NIIRELEKRGHEVL----ITARDKDETE------ELLDLYG---IDYIVIGKHG-----------DSLYGKLLESIERQY 73 (335)
T ss_pred HHHHHHHhCCCEEE----EEEeccchHH------HHHHHcC---CCeEEEcCCC-----------CCHHHHHHHHHHHHH
Confidence 77888999999998 8888753211 1111122 2222211111 111112222233333
Q ss_pred HHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCE
Q 003552 398 SEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADF 477 (811)
Q Consensus 398 ~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~ 477 (811)
+......+.+||++++..+ ..+...|..+|+|.+....+-.... ..++.+.-||.
T Consensus 74 ~l~~~~~~~~pDv~is~~s---~~a~~va~~lgiP~I~f~D~e~a~~----------------------~~~Lt~Pla~~ 128 (335)
T PF04007_consen 74 KLLKLIKKFKPDVAISFGS---PEAARVAFGLGIPSIVFNDTEHAIA----------------------QNRLTLPLADV 128 (335)
T ss_pred HHHHHHHhhCCCEEEecCc---HHHHHHHHHhCCCeEEEecCchhhc----------------------cceeehhcCCe
Confidence 3222222459999997655 4456677889999988766421100 01234567999
Q ss_pred EEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEe-cCCCCCCC----CCCCchHHHHHhhhhcchhh
Q 003552 478 IITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMDI----YFPYSEKQKRLTALHGSIEQ 552 (811)
Q Consensus 478 IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VI-pnGvD~~~----f~p~~~~~~r~~~~~~~i~~ 552 (811)
|+++..--... ...| ..+-.|. +||++... |.|..+.
T Consensus 129 i~~P~~~~~~~----~~~~---------------------G~~~~i~~y~G~~E~ayl~~F~Pd~~v------------- 170 (335)
T PF04007_consen 129 IITPEAIPKEF----LKRF---------------------GAKNQIRTYNGYKELAYLHPFKPDPEV------------- 170 (335)
T ss_pred eECCcccCHHH----HHhc---------------------CCcCCEEEECCeeeEEeecCCCCChhH-------------
Confidence 99876321000 0001 1111233 66666544 3443221
Q ss_pred hccCccccccccCCCCCCCCCEEEEEeccCccCC------HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHH
Q 003552 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKN------MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAE 626 (811)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kg------i~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~ 626 (811)
.+.+|+ + +.++|+. |..+.+- -..+-+.+..+.+. .+. .|++....+
T Consensus 171 --------l~~lg~--~-~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~-~~~-vV~ipr~~~------------ 223 (335)
T PF04007_consen 171 --------LKELGL--D-DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKY-GRN-VVIIPRYED------------ 223 (335)
T ss_pred --------HHHcCC--C-CCCEEEE--EeccccCeeecCccchHHHHHHHHHhh-Cce-EEEecCCcc------------
Confidence 133674 3 3455542 5555332 12234555555544 233 666655443
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC---Ccccc
Q 003552 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEI 703 (811)
Q Consensus 627 ~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G---G~~Ei 703 (811)
..++.++++ +.... .+++ ...+++- ||++|- +-|....||...|+|+|.+..| +.-+.
T Consensus 224 ---~~~~~~~~~----~~i~~---~~vd---~~~Ll~~-a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~ 284 (335)
T PF04007_consen 224 ---QRELFEKYG----VIIPP---EPVD---GLDLLYY-ADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKY 284 (335)
T ss_pred ---hhhHHhccC----ccccC---CCCC---HHHHHHh-cCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHH
Confidence 122334442 44433 1232 2345553 889984 4577889999999999987544 33334
Q ss_pred cccCCcEEEECCCCHHHHHHHHHH
Q 003552 704 IEHGASGFHIDPYHPDQAAELMAD 727 (811)
Q Consensus 704 I~dg~~G~li~p~D~e~lA~aI~~ 727 (811)
+.+ .|.++...|++++.+.+.+
T Consensus 285 L~~--~Gll~~~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 285 LIE--KGLLYHSTDPDEIVEYVRK 306 (335)
T ss_pred HHH--CCCeEecCCHHHHHHHHHH
Confidence 333 4788888899998886644
No 124
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.09 E-value=2.4e-05 Score=86.47 Aligned_cols=99 Identities=26% Similarity=0.384 Sum_probs=63.0
Q ss_pred cccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccc----ccc-CCcEEEE-C--CCCHHHHHHHHHHHHHhhcCCH
Q 003552 665 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI----IEH-GASGFHI-D--PYHPDQAAELMADFFGKCKENP 736 (811)
Q Consensus 665 aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~Ei----I~d-g~~G~li-~--p~D~e~lA~aI~~~l~~l~~dp 736 (811)
.|.+.|+||.||++|.|..|+--+|+|-|.|+..|..-. |++ ...|+.+ | -..+++-.+.+.+++.... ..
T Consensus 500 GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~-~q 578 (692)
T KOG3742|consen 500 GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFC-KQ 578 (692)
T ss_pred cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHH-HH
Confidence 599999999999999999999999999999998886544 433 2357655 2 1234444444544442221 33
Q ss_pred HHHHHHHHH-HHHHHHHhCCHHHHHHHHH
Q 003552 737 SHWKKISDG-GLKRIYERYTWKIYSERLM 764 (811)
Q Consensus 737 ~~~~~ms~~-a~~~v~e~yswe~~a~~ll 764 (811)
..++++-++ --++...-.+|+.+..-|.
T Consensus 579 sRRQRIiqRNrtErLSdLLDWk~lG~~Y~ 607 (692)
T KOG3742|consen 579 SRRQRIIQRNRTERLSDLLDWKYLGRYYR 607 (692)
T ss_pred HHHHHHHHhcchhhHHHHHhHHHHhHHHH
Confidence 344444433 3345555567776655443
No 125
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=98.02 E-value=0.00043 Score=79.04 Aligned_cols=159 Identities=14% Similarity=0.091 Sum_probs=104.9
Q ss_pred CCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003552 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (811)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (811)
...+++.++.|..... .+.+-.++..+.+. ++++++..++.+ . ..-++++++...+
T Consensus 235 ~d~~~vyvslGt~~~~--~~l~~~~~~a~~~l--~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~- 290 (406)
T COG1819 235 ADRPIVYVSLGTVGNA--VELLAIVLEALADL--DVRVIVSLGGAR------------------D-TLVNVPDNVIVAD- 290 (406)
T ss_pred CCCCeEEEEcCCcccH--HHHHHHHHHHHhcC--CcEEEEeccccc------------------c-ccccCCCceEEec-
Confidence 3455667788877755 33333344444442 577777776622 1 1236778888887
Q ss_pred ccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC----CcccccccCCcEEEEC--CCCHHHHH
Q 003552 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHID--PYHPDQAA 722 (811)
Q Consensus 649 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G----G~~EiI~dg~~G~li~--p~D~e~lA 722 (811)
.++..++.. .+|++|+. .|+ .|+.||+..|+|+|+-..+ ..++-+++-..|..+. .-+.+.++
T Consensus 291 ---~~p~~~~l~----~ad~vI~h---GG~-gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~ 359 (406)
T COG1819 291 ---YVPQLELLP----RADAVIHH---GGA-GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLR 359 (406)
T ss_pred ---CCCHHHHhh----hcCEEEec---CCc-chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHH
Confidence 677666555 59999987 444 4789999999999996433 3566677777898876 57889999
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003552 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (811)
Q Consensus 723 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly 767 (811)
++|.+++ .|+..++...+. .+...+.-.-+..++.+++..
T Consensus 360 ~av~~vL----~~~~~~~~~~~~-~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 360 AAVNEVL----ADDSYRRAAERL-AEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHHh----cCHHHHHHHHHH-HHHhhhcccHHHHHHHHHHHH
Confidence 9996655 787766654443 334445556555666666654
No 126
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.97 E-value=0.0048 Score=71.66 Aligned_cols=127 Identities=14% Similarity=0.148 Sum_probs=72.8
Q ss_pred CCCCEEEEEeccCc--cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003552 570 RSKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (811)
Q Consensus 570 ~~k~iIl~vGRL~~--~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (811)
++..+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 273 ~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~ 329 (459)
T PLN02448 273 EGSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP 329 (459)
T ss_pred CCceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec
Confidence 34567888888743 22244455555443 457777654321 0111111 24566666
Q ss_pred cccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCC----CCcccccccC-CcEEEECC-------
Q 003552 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEHG-ASGFHIDP------- 715 (811)
Q Consensus 648 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~----GG~~EiI~dg-~~G~li~p------- 715 (811)
+++..++... . +.++||.- +--++++||+++|+|+|+-.. ..+...+.+. +.|+-+..
T Consensus 330 ----w~pQ~~iL~h-~-~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 399 (459)
T PLN02448 330 ----WCDQLKVLCH-S-SVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETL 399 (459)
T ss_pred ----cCCHHHHhcc-C-ccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCc
Confidence 6777776652 1 13346643 234589999999999999643 3455555542 45666631
Q ss_pred CCHHHHHHHHHHHH
Q 003552 716 YHPDQAAELMADFF 729 (811)
Q Consensus 716 ~D~e~lA~aI~~~l 729 (811)
-+.+++++++.+++
T Consensus 400 ~~~~~l~~av~~vl 413 (459)
T PLN02448 400 VGREEIAELVKRFM 413 (459)
T ss_pred CcHHHHHHHHHHHh
Confidence 25678888886655
No 127
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.93 E-value=0.0012 Score=74.20 Aligned_cols=199 Identities=21% Similarity=0.200 Sum_probs=115.5
Q ss_pred CCCceEEEEcC-CCchHHHHHHHHHcCCc--EEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEec
Q 003552 405 QGFPDFIIGNY-SDGNLVASLLAYKMGIT--QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (811)
Q Consensus 405 ~~~PDlIh~h~-~~~~lva~lla~~lgvp--~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (811)
..+||+++.-+ ++.|+-.+...++.|++ +++.+- + +-.-|+.- + -+..-+..|.++|.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~---P-----qvWAWr~~--R---------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS---P-----QVWAWRPG--R---------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC---C-----ceeeeCcc--H---------HHHHHHHHhheeEC
Confidence 45999988555 55588777777888877 554332 1 11122211 1 11234567888888
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCC-CCCCCCCCCchHHHHHhhhhcchhhhccCcccc
Q 003552 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (811)
Q Consensus 482 S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (811)
=+-|.+ +|. .+|+ +...|-|. +|.-...+. ....
T Consensus 141 fPFE~~-------------------~y~-~~g~-----~~~~VGHPl~d~~~~~~~--~~~~------------------ 175 (373)
T PF02684_consen 141 FPFEPE-------------------FYK-KHGV-----PVTYVGHPLLDEVKPEPD--RAEA------------------ 175 (373)
T ss_pred CcccHH-------------------HHh-ccCC-----CeEEECCcchhhhccCCC--HHHH------------------
Confidence 776654 121 1233 34455443 332211111 1111
Q ss_pred ccccCCCCCCCCCEE-EEEec-cCc-cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003552 561 DEHVGTLSDRSKPIV-FSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (811)
Q Consensus 561 ~~~~g~l~~~~k~iI-l~vGR-L~~-~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~ 637 (811)
++.+ + ++++++| +..|+ -.+ .+.+..+++++.++.+.+|++++++...... ..+.+.+.....
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~ 241 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEY 241 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhh
Confidence 1122 2 4566654 44443 333 4566889999999999999999998875433 123345555555
Q ss_pred CCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 638 ~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
+..-.+.... ++-+..++. ||+.+..| |.+.+|++.+|+|.|..
T Consensus 242 ~~~~~~~~~~--------~~~~~~m~~-ad~al~~S-----GTaTLE~Al~g~P~Vv~ 285 (373)
T PF02684_consen 242 PPDVSIVIIE--------GESYDAMAA-ADAALAAS-----GTATLEAALLGVPMVVA 285 (373)
T ss_pred CCCCeEEEcC--------CchHHHHHh-CcchhhcC-----CHHHHHHHHhCCCEEEE
Confidence 5444444432 356777774 88877553 99999999999999986
No 128
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.69 E-value=0.001 Score=76.51 Aligned_cols=180 Identities=14% Similarity=0.142 Sum_probs=123.2
Q ss_pred cccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003552 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (811)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~- 640 (811)
...|+ +++..++++.++ ..|-...++.-+.++.+.-|+-.|++-|+|++ .+....+++++++.|+.
T Consensus 422 ~~lgl--p~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCCh
Confidence 45787 455554555444 34555566666666666679999999999865 24578899999999994
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc-------CCCCcccccc-cCCcEEE
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIE-HGASGFH 712 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT-------~~GG~~EiI~-dg~~G~l 712 (811)
.+++|.+ +.++++-.+.+. -+|+|+-+--|.| +.|.+||+-+|+||++- ..|+ .+++ -|..-.+
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhh
Confidence 6899998 666677777777 4999997765555 77899999999999974 2332 1221 2333333
Q ss_pred ECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHH
Q 003552 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE--RYTWKIYSERLMTLAG 768 (811)
Q Consensus 713 i~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e--~yswe~~a~~ll~Ly~ 768 (811)
.+ +.++..++-.. +-.|...+++.+..-.+.... -|+.+.++++++++|.
T Consensus 561 A~--s~~dYV~~av~----~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 561 AD--SRADYVEKAVA----FGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred cC--CHHHHHHHHHH----hcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 33 45555554433 347887888776665555434 4899999999999975
No 129
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.60 E-value=0.0011 Score=80.24 Aligned_cols=151 Identities=13% Similarity=0.121 Sum_probs=110.4
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHH-HHHH---HHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-LleA---~~~l~~~~----~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li 634 (811)
..|..-+++...++++-|+...|...+ ++.. +.++++.. ....+++.|.... .|...+..++.+..++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 447666889999999999999999888 5554 55554321 1255666665433 3455566777777777
Q ss_pred H----HcCCCC--cEEEeccccCcCChHHHHHHHHccccEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCccccccc
Q 003552 635 K----TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (811)
Q Consensus 635 ~----~~~L~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~d 706 (811)
+ .-.+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|.+=+-||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 6 223445 789986 3443 455555557999998876 79999999999999999999999999999986
Q ss_pred --CCcEEEECCCCHHHHHH
Q 003552 707 --GASGFHIDPYHPDQAAE 723 (811)
Q Consensus 707 --g~~G~li~p~D~e~lA~ 723 (811)
++|||.|-. +.+++.+
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999954 5555544
No 130
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.55 E-value=0.0015 Score=79.04 Aligned_cols=151 Identities=14% Similarity=0.081 Sum_probs=107.5
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHH-HH---HHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LV---ECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Ll---eA~~~l~~~~----~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li 634 (811)
..|+.-+++...++++-|+.+.|...+ ++ +-+.++++.. ....+++.|.... .|..-+..++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 456666889999999999999999888 54 4455554421 1245555554332 2444555666666666
Q ss_pred HH----cCCCC--cEEEeccccCcCChHHHHHHHHccccEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCccccccc
Q 003552 635 KT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (811)
Q Consensus 635 ~~----~~L~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~d 706 (811)
+. -.+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 63 22345 788986 3443 344555557999998876 79999999999999999999999999999987
Q ss_pred --CCcEEEECCCCHHHHHH
Q 003552 707 --GASGFHIDPYHPDQAAE 723 (811)
Q Consensus 707 --g~~G~li~p~D~e~lA~ 723 (811)
++|+|+|-. +.+++.+
T Consensus 672 vG~eN~fiFG~-~~~ev~~ 689 (797)
T cd04300 672 VGEENIFIFGL-TAEEVEA 689 (797)
T ss_pred hCcCcEEEeCC-CHHHHHH
Confidence 889999964 4555443
No 131
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.53 E-value=0.0054 Score=67.86 Aligned_cols=117 Identities=13% Similarity=0.102 Sum_probs=87.1
Q ss_pred CcEEEeccccCcCCh-HHHHHHHHccccEEEecCC---CCC---CCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEE
Q 003552 641 GQFRWIAAQTNRARN-GELYRYIADTKGAFVQPAF---YEA---FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713 (811)
Q Consensus 641 ~~V~flG~~~~~v~~-~el~~~ia~aadvfV~PS~---~E~---fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li 713 (811)
+++..+| .... ..+..++.. .++++.-++ -++ +.+-+.|+|+||.|-+++...+..-.+.+|..=++.
T Consensus 237 ~~~~yIg----~~~~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~ 311 (373)
T COG4641 237 PNVQYIG----YYNPKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY 311 (373)
T ss_pred chhhhhh----ccCccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe
Confidence 3455666 3333 556666664 667664433 122 377899999999999999888888888888765554
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 714 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 714 ~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
.|..++.+++ +.+...++.++++.+.|.+++...||.+.-+..+++...
T Consensus 312 --~d~kdl~~~~----~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 312 --QDSKDLKEKL----KYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373)
T ss_pred --cCHHHHHHHH----HHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Confidence 4899999999 555689999999999999999999998877766665543
No 132
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.49 E-value=0.0068 Score=67.47 Aligned_cols=200 Identities=19% Similarity=0.164 Sum_probs=114.7
Q ss_pred CCCceEEEEcCC-CchHHHHHHHHHcC--CcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEec
Q 003552 405 QGFPDFIIGNYS-DGNLVASLLAYKMG--ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (811)
Q Consensus 405 ~~~PDlIh~h~~-~~~lva~lla~~lg--vp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (811)
..+||++++-++ +.|+-....-|+.| +|+|+.+-- +-.-|+.-. -....+.+|.+.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~P--------sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSP--------SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECc--------ceeeechhh-----------HHHHHHHhhHeeee
Confidence 569999886655 44665555556666 787765431 122333221 11356688999998
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecC-CCCCCCCCCCchHHHHHhhhhcchhhhccCcccc
Q 003552 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (811)
Q Consensus 482 S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (811)
=+-|.+ +|. ..|++ ...|-+ =+|.-.+.+.... .
T Consensus 144 lPFE~~-------------------~y~-k~g~~-----~~yVGHpl~d~i~~~~~r~~--------------------a 178 (381)
T COG0763 144 LPFEPA-------------------FYD-KFGLP-----CTYVGHPLADEIPLLPDREA--------------------A 178 (381)
T ss_pred cCCCHH-------------------HHH-hcCCC-----eEEeCChhhhhccccccHHH--------------------H
Confidence 877655 111 11221 334433 2333223333222 2
Q ss_pred ccccCCCCCCCCC-EEEEEec-cCc-cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003552 561 DEHVGTLSDRSKP-IVFSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (811)
Q Consensus 561 ~~~~g~l~~~~k~-iIl~vGR-L~~-~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~ 637 (811)
++.+|+ +.+++ +.+..|+ -.+ .+....+++++.++++++|+.++++--.... .+.+.....+.
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~~ 244 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALKW 244 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhhc
Confidence 244666 44444 4555554 223 4567888899999998999999998776543 23333333222
Q ss_pred -CCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 003552 638 -KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (811)
Q Consensus 638 -~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~ 696 (811)
...-.+... .++-+..++. ||+.+.. .|.+.+|+|.+|+|.|.+.
T Consensus 245 ~~~~~~~~~~--------~~~~~~a~~~-aD~al~a-----SGT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 245 EVAGLSLILI--------DGEKRKAFAA-ADAALAA-----SGTATLEAALAGTPMVVAY 290 (381)
T ss_pred cccCceEEec--------CchHHHHHHH-hhHHHHh-----ccHHHHHHHHhCCCEEEEE
Confidence 221223333 2455667774 8876644 3999999999999999873
No 133
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.34 E-value=0.0072 Score=72.56 Aligned_cols=144 Identities=16% Similarity=0.125 Sum_probs=110.0
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHHHHH----HHHHhh-ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVE----CYGKNS-QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Lle----A~~~l~-~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~ 637 (811)
+.|+..+++...++++-|+.+.|..+..+. .+..++ +..|.+.+++.|.... .|-..+..+..+...++..
T Consensus 478 ~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~i 553 (750)
T COG0058 478 RTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVI 553 (750)
T ss_pred hcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhh
Confidence 345555788999999999999998776653 444444 3335566666665433 3556677788888888887
Q ss_pred CCCCcEEEeccccCcCChHHHHHHHHccccEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCcccccc--cCCcEEEE
Q 003552 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHI 713 (811)
Q Consensus 638 ~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~--dg~~G~li 713 (811)
+...+|.|+. ..+. .+.+.+-.++||-.+-|. .|+.|.+=+-||.-|.++++|-.|...|+.+ ++.|||+|
T Consensus 554 n~~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~f 628 (750)
T COG0058 554 NNKLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIF 628 (750)
T ss_pred cccceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEe
Confidence 7778899997 3443 455555557999888775 7999999999999999999999999999997 89999999
Q ss_pred CC
Q 003552 714 DP 715 (811)
Q Consensus 714 ~p 715 (811)
-.
T Consensus 629 G~ 630 (750)
T COG0058 629 GE 630 (750)
T ss_pred CC
Confidence 54
No 134
>PLN02554 UDP-glycosyltransferase family protein
Probab=97.25 E-value=0.24 Score=58.06 Aligned_cols=79 Identities=16% Similarity=0.115 Sum_probs=48.3
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC----CCCcc-cccccCCcEEEECC
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPA-EIIEHGASGFHIDP 715 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~----~GG~~-EiI~dg~~G~li~p 715 (811)
+++.+.+ +++..++... . +.++||.- -| -++++||+.+|+|+|+-. ...+. ..++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555556 6676666531 1 34556642 22 348999999999999963 33344 34444456776642
Q ss_pred -------------CCHHHHHHHHHHHH
Q 003552 716 -------------YHPDQAAELMADFF 729 (811)
Q Consensus 716 -------------~D~e~lA~aI~~~l 729 (811)
-+.++++++|.+++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm 438 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLM 438 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHh
Confidence 25677777886655
No 135
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.24 E-value=0.64 Score=54.47 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=45.9
Q ss_pred CCcEEEeccccCcCChHHHHHHHHcccc--EEEecCCCCCCCHHHHHHHHcCCCEEEcCC----CCccccccc-CCcEEE
Q 003552 640 DGQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH-GASGFH 712 (811)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~ia~aad--vfV~PS~~E~fGltvlEAMa~GlPVIAT~~----GG~~EiI~d-g~~G~l 712 (811)
..+++..+ +++..++.. + ++ +||.- -| -++++||+.+|+|+|+-.. .-+...+.+ -..|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~---h-~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD---H-QATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc---c-Cccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 34677766 666666554 2 43 46643 22 4589999999999999633 334433321 123433
Q ss_pred EC----------CCCHHHHHHHHHHHH
Q 003552 713 ID----------PYHPDQAAELMADFF 729 (811)
Q Consensus 713 i~----------p~D~e~lA~aI~~~l 729 (811)
+. .-+.++++++|.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 31 125677888886655
No 136
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.23 E-value=0.11 Score=58.26 Aligned_cols=278 Identities=14% Similarity=0.162 Sum_probs=161.1
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCH
Q 003552 405 QGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (811)
Q Consensus 405 ~~~PDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (811)
..+||+|..|.-. ..++++++|...++|+++.--++-. .+.+|-. . + .....=.-||.-+++|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PE--E-~-------NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPE--E-I-------NRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcH--H-H-------HHHHHHHhhhhhcCChH
Confidence 4599998777643 3677799999999999876554321 1111110 0 0 01122334677777776
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcchhhhccCccccccc
Q 003552 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (811)
Q Consensus 484 ~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 563 (811)
..++ +...-|++ +.++.|+-|-+- +.-... ...+.+ .......
T Consensus 155 ~ar~--------------------nLl~EG~~--~~~IfvtGnt~i--------Dal~~~---~~~~~~----~~~~~~~ 197 (383)
T COG0381 155 IARK--------------------NLLREGVP--EKRIFVTGNTVI--------DALLNT---RDRVLE----DSKILAK 197 (383)
T ss_pred HHHH--------------------HHHHcCCC--ccceEEeCChHH--------HHHHHH---Hhhhcc----chhhHHh
Confidence 6554 22234554 667888877431 110000 000000 0000000
Q ss_pred cCCCCCCCCCEEEEEeccCcc-CCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH-HHcCCCC
Q 003552 564 VGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM-KTYKLDG 641 (811)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~-Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li-~~~~L~~ 641 (811)
+ .....++.+++++=|-... +++..+++++.++.+.++++.++.--... ..+++.. ..++-..
T Consensus 198 ~-~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~~~ 262 (383)
T COG0381 198 G-LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKNVE 262 (383)
T ss_pred h-hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCCCC
Confidence 0 1112334566666665554 99999999999999888776666543321 2333344 5566666
Q ss_pred cEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CcccccccCCcEEEECCCCHHH
Q 003552 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQ 720 (811)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G-G~~EiI~dg~~G~li~p~D~e~ 720 (811)
+|.++. ++...+...++.. | .+++. --|-..=||-..|+||+.-+.+ .-+|-++.| +-.++. .|.+.
T Consensus 263 ~v~li~----pl~~~~f~~L~~~-a-~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~~ 330 (383)
T COG0381 263 RVKLID----PLGYLDFHNLMKN-A-FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEEN 330 (383)
T ss_pred cEEEeC----CcchHHHHHHHHh-c-eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHHH
Confidence 799987 7778888888875 4 33333 1255678999999999997544 456666444 345564 36677
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 721 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
+.+++ ..++++++..++|+.. ...|.=...++++.++...|
T Consensus 331 i~~~~----~~ll~~~~~~~~m~~~-----~npYgdg~as~rIv~~l~~~ 371 (383)
T COG0381 331 ILDAA----TELLEDEEFYERMSNA-----KNPYGDGNASERIVEILLNY 371 (383)
T ss_pred HHHHH----HHHhhChHHHHHHhcc-----cCCCcCcchHHHHHHHHHHH
Confidence 77777 4555899888887654 34455555666666655543
No 137
>PLN02173 UDP-glucosyl transferase family protein
Probab=97.23 E-value=0.69 Score=53.72 Aligned_cols=80 Identities=11% Similarity=0.123 Sum_probs=51.9
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCcccccccC-CcEEEEC
Q 003552 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID 714 (811)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI~dg-~~G~li~ 714 (811)
.+++.+.+ +++..++...= +.++||.- +-.++++||+++|+|+|+- +..-+...+.+. ..|+-+.
T Consensus 316 ~~~~~i~~----W~PQ~~iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~ 385 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK 385 (449)
T ss_pred CCceEEeC----CCCHHHHhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe
Confidence 35677777 77766655421 13356642 3356899999999999996 344456666553 4677664
Q ss_pred CC------CHHHHHHHHHHHH
Q 003552 715 PY------HPDQAAELMADFF 729 (811)
Q Consensus 715 p~------D~e~lA~aI~~~l 729 (811)
.. +.+++++++.+++
T Consensus 386 ~~~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 386 AEKESGIAKREEIEFSIKEVM 406 (449)
T ss_pred ecccCCcccHHHHHHHHHHHh
Confidence 21 5688888887665
No 138
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.19 E-value=0.69 Score=54.14 Aligned_cols=118 Identities=17% Similarity=0.128 Sum_probs=67.2
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCccccccc-CCcEEEECC
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP 715 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI~d-g~~G~li~p 715 (811)
.++++.+ +++..++... .+.++||.- -| -++++||+++|+|+|+- +..-+...+.+ -+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4566666 6666665541 125677753 22 45899999999999995 34445554433 356776632
Q ss_pred -----CCHHHHHHHHHHHHHhhcCCHHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 003552 716 -----YHPDQAAELMADFFGKCKENPSHW---KKISDGGLKRIYERYTWKIYSERLMTLAGVYG 771 (811)
Q Consensus 716 -----~D~e~lA~aI~~~l~~l~~dp~~~---~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~~ 771 (811)
-+.+++++++.+++. ++++.+ +++++.+++.+.+.=|-....+++.+..+.+|
T Consensus 413 ~~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 413 GADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred CCCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 256788888876552 344433 23444444444333344444455555555544
No 139
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=97.15 E-value=0.0047 Score=74.71 Aligned_cols=152 Identities=16% Similarity=0.115 Sum_probs=106.7
Q ss_pred cccCCCCCCCCCEEEEEeccCccCCHHH-HHHH---HHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003552 562 EHVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (811)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~~~Kgi~~-LleA---~~~l~~~~----~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~l 633 (811)
++.|+..+++...++++-|+...|...+ ++.. +.++++.- ....+++.|.... .|..-+..++.+..+
T Consensus 517 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~v 592 (794)
T TIGR02093 517 EHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSV 592 (794)
T ss_pred HhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHH
Confidence 3456666888999999999999999888 5544 44454321 1245555554333 234445556666666
Q ss_pred HHHc----CCCC--cEEEeccccCcCChHHHHHHHHccccEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCcccccc
Q 003552 634 MKTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE 705 (811)
Q Consensus 634 i~~~----~L~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~ 705 (811)
++.. .+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+-+|.-|.++++|-.|...|+.+
T Consensus 593 a~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e 667 (794)
T TIGR02093 593 AEVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIRE 667 (794)
T ss_pred HHHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHH
Confidence 6432 2345 788986 3444 344455447999998876 7999999999999999999999999999998
Q ss_pred c--CCcEEEECCCCHHHHHH
Q 003552 706 H--GASGFHIDPYHPDQAAE 723 (811)
Q Consensus 706 d--g~~G~li~p~D~e~lA~ 723 (811)
+ ++|+|+|-. +.+++.+
T Consensus 668 ~vG~eN~fiFG~-~~~ev~~ 686 (794)
T TIGR02093 668 EVGAENIFIFGL-TVEEVEA 686 (794)
T ss_pred HhCcccEEEcCC-CHHHHHH
Confidence 7 889999954 5555544
No 140
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.10 E-value=0.22 Score=57.35 Aligned_cols=105 Identities=11% Similarity=0.125 Sum_probs=60.6
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCC----CCccccccc
Q 003552 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH 706 (811)
Q Consensus 631 ~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~----GG~~EiI~d 706 (811)
+++.+.+.-..+++.+. +..+..++..+++. +|++|-.-. -+++=|+++|+|+|+-.. -|..+.+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 34444444344455543 13445688889996 999885422 257889999999999643 2333333
Q ss_pred CCcEEEECC--CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003552 707 GASGFHIDP--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (811)
Q Consensus 707 g~~G~li~p--~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 750 (811)
|...++++. -+.+++.+.+ .++++|.+.+++.-+.+.+..
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v----~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMV----ADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred CCccEEechhhCCHHHHHHHH----HHHHhCHHHHHHHHHHHHHHH
Confidence 223344443 3456677666 455577766554434444443
No 141
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=97.07 E-value=0.004 Score=75.28 Aligned_cols=149 Identities=14% Similarity=0.056 Sum_probs=106.2
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCHHH-HHHH---HHHhhccCC-----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-LleA---~~~l~~~~~-----~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~l 633 (811)
+.|+.-+++...++++-|+...|...+ ++.. +.++++. | ...+++.|.... .|..-+..++.+..+
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~v 594 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIREN-PQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKV 594 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhC-CCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHH
Confidence 346666888889999999999999888 5544 4444432 2 255666665433 344455566666666
Q ss_pred HHHcC----CCC--cEEEeccccCcCChHHHHHHHHccccEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCcccccc
Q 003552 634 MKTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE 705 (811)
Q Consensus 634 i~~~~----L~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~ 705 (811)
++..+ +.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|.+=+-+|.-|.++++|-.|...|+.+
T Consensus 595 a~~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e 669 (798)
T PRK14985 595 AEVINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAE 669 (798)
T ss_pred HHHhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHH
Confidence 64442 344 788986 3444 444555557999998876 7999999999999999999999999999997
Q ss_pred c--CCcEEEECCCCHHHHH
Q 003552 706 H--GASGFHIDPYHPDQAA 722 (811)
Q Consensus 706 d--g~~G~li~p~D~e~lA 722 (811)
+ ++|||.|-. +.+++.
T Consensus 670 ~vG~eN~f~fG~-~~~ev~ 687 (798)
T PRK14985 670 QVGEENIFIFGH-TVEQVK 687 (798)
T ss_pred HhCcCcEEEeCC-CHHHHH
Confidence 6 789999964 445443
No 142
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.03 E-value=0.066 Score=63.41 Aligned_cols=197 Identities=15% Similarity=0.095 Sum_probs=106.8
Q ss_pred CCCceEEEEcC-CCchHHHHHHHHHcCC--cEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEec
Q 003552 405 QGFPDFIIGNY-SDGNLVASLLAYKMGI--TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (811)
Q Consensus 405 ~~~PDlIh~h~-~~~~lva~lla~~lgv--p~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (811)
..+||++++-+ ++.|+-.+..+|+.|+ |+++.+-- +-..|+.- +. +..-+..|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsP--------qVWAWR~~--Ri---------kki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCP--------SIWAWRPK--RK---------TILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECc--------cceeeCcc--hH---------HHHHHHhhhheec
Confidence 45999998644 5558866667778885 87664421 11123211 11 1234567888887
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCC-CCCCCCCCCchHHHHHhhhhcchhhhccCcccc
Q 003552 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (811)
Q Consensus 482 S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (811)
=+-|.+ +|+ .+|+ ++..|-+. +|.-...+.... .
T Consensus 369 fPFE~~-------------------~y~-~~gv-----~v~yVGHPL~d~i~~~~~~~~--------------------~ 403 (608)
T PRK01021 369 LPFEQN-------------------LFK-DSPL-----RTVYLGHPLVETISSFSPNLS--------------------W 403 (608)
T ss_pred CccCHH-------------------HHH-hcCC-----CeEEECCcHHhhcccCCCHHH--------------------H
Confidence 776654 222 2333 24444332 343211122111 1
Q ss_pred ccccCCCCCCCCCEE-EEEec-cCc-cCCHHHHHHHHH--HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003552 561 DEHVGTLSDRSKPIV-FSMAR-LDH-VKNMTGLVECYG--KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (811)
Q Consensus 561 ~~~~g~l~~~~k~iI-l~vGR-L~~-~Kgi~~LleA~~--~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~ 635 (811)
++++|+ ++++++| +..|. -.+ .+.+..+++|+. ++. ++.++++...... ..+.+++.++
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~~l~fvvp~a~~~-----------~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---STHQLLVSSANPK-----------YDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---cCeEEEEecCchh-----------hHHHHHHHHh
Confidence 234566 4455554 44443 333 456788888887 443 3577776433211 1234445454
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 636 ~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
..++ -.+..+. ..+-+..++ +||+.+..| |.+.+|++.+|+|.|..
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 3331 1234432 012366777 499888654 99999999999999986
No 143
>PLN02208 glycosyltransferase family protein
Probab=97.02 E-value=1.1 Score=52.11 Aligned_cols=93 Identities=9% Similarity=0.050 Sum_probs=54.8
Q ss_pred cEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC----CCCccccccc-CCcEEEECCC
Q 003552 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHIDPY 716 (811)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~----~GG~~EiI~d-g~~G~li~p~ 716 (811)
++.+.+ +++..++... . +.++||.- +--++++||+++|+|+|+-. ...+...+.+ -..|..++..
T Consensus 312 g~~v~~----W~PQ~~iL~H-~-~v~~FvtH----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 381 (442)
T PLN02208 312 GVVWGG----WVQQPLILDH-P-SIGCFVNH----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE 381 (442)
T ss_pred CcEeec----cCCHHHHhcC-C-ccCeEEcc----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc
Confidence 455555 6666665542 1 12345532 22358999999999999963 3345554444 4567777542
Q ss_pred -----CHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHHH
Q 003552 717 -----HPDQAAELMADFFGKCKENP-SHWKKISDGGLK 748 (811)
Q Consensus 717 -----D~e~lA~aI~~~l~~l~~dp-~~~~~ms~~a~~ 748 (811)
+.++++++|.+++ .++ +..+++.+++++
T Consensus 382 ~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 382 KTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred cCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 5678888886655 554 334445444443
No 144
>PLN02210 UDP-glucosyl transferase
Probab=97.01 E-value=1.1 Score=52.16 Aligned_cols=153 Identities=12% Similarity=0.120 Sum_probs=80.8
Q ss_pred CCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003552 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (811)
Q Consensus 571 ~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (811)
+..+.++.|.+... .-+.+-+.+..+... ..+++++-.... ...+ .+.+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~--~~~~------~~~~~~~~~----~~~g~v~~--- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKE--KAQN------VQVLQEMVK----EGQGVVLE--- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCc--cccc------hhhHHhhcc----CCCeEEEe---
Confidence 45688888887542 334444444444433 245555432111 0001 111222211 13333445
Q ss_pred CcCChHHHHHHHHccc--cEEEecCCCCCCCHHHHHHHHcCCCEEEcC----CCCccccccc-CCcEEEECC------CC
Q 003552 651 NRARNGELYRYIADTK--GAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHIDP------YH 717 (811)
Q Consensus 651 ~~v~~~el~~~ia~aa--dvfV~PS~~E~fGltvlEAMa~GlPVIAT~----~GG~~EiI~d-g~~G~li~p------~D 717 (811)
+++..++.. + + ++||.- -| -++++||+.+|+|+|+-. ..-+...+.+ -+.|..++. -+
T Consensus 331 -w~PQ~~iL~---h-~~vg~FitH---~G-~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 401 (456)
T PLN02210 331 -WSPQEKILS---H-MAISCFVTH---CG-WNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELK 401 (456)
T ss_pred -cCCHHHHhc---C-cCcCeEEee---CC-cccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCC
Confidence 667666554 3 4 466643 22 238999999999999963 3345555554 457877742 36
Q ss_pred HHHHHHHHHHHHHhhcCCHH------HHHHHHHHHHHHHHHhC
Q 003552 718 PDQAAELMADFFGKCKENPS------HWKKISDGGLKRIYERY 754 (811)
Q Consensus 718 ~e~lA~aI~~~l~~l~~dp~------~~~~ms~~a~~~v~e~y 754 (811)
.+++++++.+++ .+++ ..+++++.+++-+.+-=
T Consensus 402 ~~~l~~av~~~m----~~~~g~~~r~~a~~l~~~a~~Av~~gG 440 (456)
T PLN02210 402 VEEVERCIEAVT----EGPAAADIRRRAAELKHVARLALAPGG 440 (456)
T ss_pred HHHHHHHHHHHh----cCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 678888886665 4533 23344555555544433
No 145
>PLN02562 UDP-glycosyltransferase
Probab=96.97 E-value=0.87 Score=52.90 Aligned_cols=138 Identities=12% Similarity=0.085 Sum_probs=79.8
Q ss_pred CCCEEEEEeccC---ccCCHHHHHHHHHHhhccCCCeEEEEE-eCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003552 571 SKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (811)
Q Consensus 571 ~k~iIl~vGRL~---~~Kgi~~LleA~~~l~~~~~~v~LVIV-G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 646 (811)
+..++++.|... +.+-+..++.++.++. .+++++ ..+.. ...+ +.+ .++ ..+++...
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g-----~~fiW~~~~~~~---~~l~------~~~---~~~--~~~~~~v~ 333 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASG-----RPFIWVLNPVWR---EGLP------PGY---VER--VSKQGKVV 333 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCC-----CCEEEEEcCCch---hhCC------HHH---HHH--hccCEEEE
Confidence 346788999864 3444555666665552 245543 22111 0000 011 111 23567766
Q ss_pred ccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCccccccc-CCcEEEECCCCHHHH
Q 003552 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDPYHPDQA 721 (811)
Q Consensus 647 G~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI~d-g~~G~li~p~D~e~l 721 (811)
+ +++..++... . +.++||.- -| -++++||+.+|+|+|+- +...+...+.+ -..|+-+..-+.+++
T Consensus 334 ~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l 403 (448)
T PLN02562 334 S----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEV 403 (448)
T ss_pred e----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHH
Confidence 6 7777776652 1 13456642 22 45899999999999986 44445666654 256777755578888
Q ss_pred HHHHHHHHHhhcCCHHHHHH
Q 003552 722 AELMADFFGKCKENPSHWKK 741 (811)
Q Consensus 722 A~aI~~~l~~l~~dp~~~~~ 741 (811)
+++|.+++ .|++++++
T Consensus 404 ~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 404 EEGLRKVM----EDSGMGER 419 (448)
T ss_pred HHHHHHHh----CCHHHHHH
Confidence 88886665 67665543
No 146
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.96 E-value=0.16 Score=55.34 Aligned_cols=170 Identities=11% Similarity=0.068 Sum_probs=115.4
Q ss_pred CCCEEEEEecc-CccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003552 571 SKPIVFSMARL-DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (811)
Q Consensus 571 ~k~iIl~vGRL-~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 649 (811)
+.++.+-+|+- |+..+.-.+++++.+.. ..++++++.=+.|. ...++++++.+.++++--.+++..+-
T Consensus 144 ~~~~tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~-- 212 (322)
T PRK02797 144 AGKMTILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT-- 212 (322)
T ss_pred CCceEEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh--
Confidence 34566666764 56777777778877654 36788888766653 12467888989998887657888876
Q ss_pred cCcCChHHHHHHHHccccEEEecC-CCCCCCHHHHHHHHcCCCEEEc-CCCCcccccccCCcEEEECCCCHHHHHHHHHH
Q 003552 650 TNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (811)
Q Consensus 650 ~~~v~~~el~~~ia~aadvfV~PS-~~E~fGltvlEAMa~GlPVIAT-~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~ 727 (811)
+.++.+|-.++++. +|+.++-- +.+|.|+. +=.+..|+||+-+ +..-..++.+.|.. ++++..+.+ ..+.+
T Consensus 213 -e~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGnl-~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L~---~~~v~ 285 (322)
T PRK02797 213 -EKLPFDDYLALLRQ-CDLGYFIFARQQGIGTL-CLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDLD---EDIVR 285 (322)
T ss_pred -hhCCHHHHHHHHHh-CCEEEEeechhhHHhHH-HHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCccc---HHHHH
Confidence 57888999999996 99987664 67888864 5588999999998 55556666665543 444433322 11211
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003552 728 FFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (811)
Q Consensus 728 ~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~ 769 (811)
+..+++....++.+. |+-+.+.+.|.+++..
T Consensus 286 ---------e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 286 ---------EAQRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred ---------HHHHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 122334455555553 9999999999888754
No 147
>PLN00414 glycosyltransferase family protein
Probab=96.92 E-value=1.3 Score=51.49 Aligned_cols=88 Identities=6% Similarity=0.009 Sum_probs=54.5
Q ss_pred cCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC----CCCcccccc-cCCcEEEECC-----CCHHHH
Q 003552 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIE-HGASGFHIDP-----YHPDQA 721 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~----~GG~~EiI~-dg~~G~li~p-----~D~e~l 721 (811)
+++..++... . +.+.||.- +--++++||+.+|+|+++-. ...+...+. .-+.|..+.. -+.+++
T Consensus 319 w~PQ~~vL~h-~-~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 319 WVEQPLILSH-P-SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred cCCHHHHhcC-C-ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHH
Confidence 6666666542 1 13567753 22468999999999999963 333555553 4467777742 367788
Q ss_pred HHHHHHHHHhhcCCH-HHHHHHHHHHHHH
Q 003552 722 AELMADFFGKCKENP-SHWKKISDGGLKR 749 (811)
Q Consensus 722 A~aI~~~l~~l~~dp-~~~~~ms~~a~~~ 749 (811)
++++.+++ .++ +..+++.+++++.
T Consensus 393 ~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 393 RDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 88886655 443 4445555555544
No 148
>PLN02670 transferase, transferring glycosyl groups
Probab=96.77 E-value=1.7 Score=50.78 Aligned_cols=112 Identities=12% Similarity=0.100 Sum_probs=65.4
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCcccccccCCcEEEECC---
Q 003552 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDP--- 715 (811)
Q Consensus 643 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI~dg~~G~li~p--- 715 (811)
+.+.+ +++..++... . +.++||.- +--++++||+++|+|+++- +...+...+..-+.|+.++.
T Consensus 341 ~vv~~----W~PQ~~IL~H-~-~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~ 410 (472)
T PLN02670 341 MIHVG----WVPQVKILSH-E-SVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDER 410 (472)
T ss_pred eEEeC----cCCHHHHhcC-c-ccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeecccc
Confidence 44445 6666666542 1 13336642 2245899999999999996 44445556666678887754
Q ss_pred ---CCHHHHHHHHHHHHHhhcCCHH--HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003552 716 ---YHPDQAAELMADFFGKCKENPS--HWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (811)
Q Consensus 716 ---~D~e~lA~aI~~~l~~l~~dp~--~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~ 768 (811)
-+.++++++|.+++ .+++ .+++-.++-++.+.+.=+-..+++.+++...
T Consensus 411 ~~~~~~e~i~~av~~vm----~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 411 DGSFTSDSVAESVRLAM----VDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred CCcCcHHHHHHHHHHHh----cCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHH
Confidence 24778888886655 5541 2222223333344445556666666666544
No 149
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.77 E-value=0.0095 Score=59.88 Aligned_cols=112 Identities=21% Similarity=0.299 Sum_probs=62.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCC--hhhH-hhhhhhhhhhhhhhHHHH
Q 003552 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDS--DIYW-KKFDEKYHFSCQFTADLI 470 (811)
Q Consensus 395 ~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s--~~~~-~~~~~~y~f~~~~~~e~~ 470 (811)
.+...+++. +..||||++|...|..+ .+.... ++|++..+=-.......+. |... ...+...+...+-.....
T Consensus 55 ~a~~~L~~~-Gf~PDvI~~H~GWGe~L--flkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~ 131 (171)
T PF12000_consen 55 RAARQLRAQ-GFVPDVIIAHPGWGETL--FLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLL 131 (171)
T ss_pred HHHHHHHHc-CCCCCEEEEcCCcchhh--hHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHH
Confidence 344455554 77899999998776332 233344 6776643211100000000 0000 011122222223345667
Q ss_pred HHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCC
Q 003552 471 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (811)
Q Consensus 471 a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f 533 (811)
++..||..|+.|...+. +| |. .+.+|+.||+-|||++.+
T Consensus 132 ~l~~~D~~isPT~wQ~~-------~f--------P~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 132 ALEQADAGISPTRWQRS-------QF--------PA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHhCCcCcCCCHHHHH-------hC--------CH---------HHHcCcEEeecccchhhc
Confidence 89999999999988765 22 22 226799999999999765
No 150
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.64 E-value=0.34 Score=53.65 Aligned_cols=129 Identities=11% Similarity=0.043 Sum_probs=90.0
Q ss_pred CCCEEEEEec-cCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003552 571 SKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (811)
Q Consensus 571 ~k~iIl~vGR-L~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 649 (811)
+++.-+-+|+ -++..+.-.+++++.+.. .+++++++-=+.+. ...++++++.+.++++--.+++..+-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~-- 251 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT-- 251 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh--
Confidence 3455566666 456777777777777543 35788777654443 13467888888888876666787764
Q ss_pred cCcCChHHHHHHHHccccEEEecC-CCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEE
Q 003552 650 TNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713 (811)
Q Consensus 650 ~~~v~~~el~~~ia~aadvfV~PS-~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li 713 (811)
+.++.+|-.++++. +|+.++.. +..|.|+ ++=.+.+|+||+-+.....-....+..--+++
T Consensus 252 -e~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf 313 (360)
T PF07429_consen 252 -EFMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLF 313 (360)
T ss_pred -hhCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEe
Confidence 47889999999996 99999887 5788885 55689999999999666554444333223444
No 151
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.50 E-value=2.3 Score=49.48 Aligned_cols=79 Identities=14% Similarity=0.169 Sum_probs=51.2
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCcccccccC-CcEEEEC-
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID- 714 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI~dg-~~G~li~- 714 (811)
++....+ +++..++... . +.++||.- -| -++++||+++|+|+|+- +...+...+.+. +.|+-++
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSH---CG-WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeec---Cc-hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5555556 7777776652 1 24457753 22 34899999999999996 444455555443 5677663
Q ss_pred CCCHHHHHHHHHHHH
Q 003552 715 PYHPDQAAELMADFF 729 (811)
Q Consensus 715 p~D~e~lA~aI~~~l 729 (811)
.-+.++++++|.+++
T Consensus 394 ~~~~~~v~~av~~lm 408 (451)
T PLN02410 394 DLDRGAVERAVKRLM 408 (451)
T ss_pred cccHHHHHHHHHHHH
Confidence 336778888886655
No 152
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.34 E-value=0.37 Score=58.81 Aligned_cols=293 Identities=13% Similarity=0.074 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHH
Q 003552 393 TEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA 471 (811)
Q Consensus 393 ~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~-lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a 471 (811)
.......+....+ .-|+|..|.....++...+..+ ..+++.+..|+..+. +.+ |+....-..-+..
T Consensus 127 n~~f~d~ive~~~-~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfps----sEi--------~r~lp~r~eIl~g 193 (732)
T KOG1050|consen 127 NQAFADKIVEVYE-EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPS----SEI--------YRCLPVRKEILRG 193 (732)
T ss_pred hHHHHHHHHHhcc-CCCcEEEEcchhhccchhhhcccccceEEEeccCCCCh----HHH--------HHhcccHHHHHHh
Confidence 3444455555555 7788888887766655444444 355665777764321 111 1111111112234
Q ss_pred HhhCCEEEecCHHHHhhccc-----cccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhh
Q 003552 472 MNNADFIITSTYQEIAGTKN-----TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTAL 546 (811)
Q Consensus 472 ~~~AD~IIt~S~~~~~~~k~-----~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~ 546 (811)
+..+|.|-..+++.....-. ..-.+.++ |... .+.|.+ ....+.++|-|+|...|............
T Consensus 194 ll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~--~~~~----~v~~rg-r~~~v~~~pigid~~r~v~~~~~~~~~~~- 265 (732)
T KOG1050|consen 194 LLYDDLLGFHTDDYARHFLSTCSRLLGLEVASK--FPTA----GVSGRG-RDVSVKALPIGIDVQRFVKLLELPYVGSK- 265 (732)
T ss_pred hhccCccccccccHHHHHHHHHHHHHHhhhhcc--CCcc----eEEecc-ceeeeeecccccchHHhhccccchhHHHH-
Confidence 55566655444332210000 00000000 0000 011111 12356778999998777543221110000
Q ss_pred hcchhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccC----CCeEEEEEeCcCCCCCCcchH
Q 003552 547 HGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR----ELVNLVVVAGYIDVNKSKDRE 622 (811)
Q Consensus 547 ~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~----~~v~LVIVG~g~~~~~~~d~e 622 (811)
..+ +... ..++.+|+-+-|++..||+..=+.++.++...+ +.+.++.+..+.. ....+
T Consensus 266 ~~e--------------i~~~-~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~---~~~~~ 327 (732)
T KOG1050|consen 266 GME--------------IKEP-FKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKR---TDGKE 327 (732)
T ss_pred HHH--------------Hhhh-ccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCc---ccchH
Confidence 000 1110 247789999999999999988888888877654 4577777776544 11222
Q ss_pred HHHHHHHHHHHHHHc----CC--CCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcC----CCE
Q 003552 623 EIAEIEKMHELMKTY----KL--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPT 692 (811)
Q Consensus 623 ~~~~~~~l~~li~~~----~L--~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~G----lPV 692 (811)
..+....+...+.+. +- ...|+++- ..++..++.++++ .+|++...++-+|..++.+|+..|. .+.
T Consensus 328 v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~l 403 (732)
T KOG1050|consen 328 VEELKFCVSVHVRRINEKFGSASYQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVL 403 (732)
T ss_pred HHHHHHHhHhhhhhhhhccCCcccceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCce
Confidence 222233333333322 11 12344433 3677889999998 4999999999999999999999984 788
Q ss_pred EEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHH
Q 003552 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (811)
Q Consensus 693 IAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~ 730 (811)
|.+.+-|..+..+++ ...++|.|.++++..|..+++
T Consensus 404 Vlsef~G~~~tl~d~--aivvnpw~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 404 VLSEFIGDDTTLEDA--AIVVNPWDGDEFAILISKALT 439 (732)
T ss_pred EEeeecccccccccc--CEEECCcchHHHHHHHHHHhh
Confidence 888888888877553 678999999999999987764
No 153
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=96.33 E-value=0.1 Score=62.89 Aligned_cols=222 Identities=15% Similarity=0.142 Sum_probs=122.8
Q ss_pred HHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCc--hHHHHHhh-
Q 003552 469 LIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYS--EKQKRLTA- 545 (811)
Q Consensus 469 ~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~--~~~~r~~~- 545 (811)
.+++..+..+-.+|.-.-+-+++.+- +.++ .+++.||.-|-|||....|.... .-.+...+
T Consensus 326 ~LAl~~S~~vNGVS~LH~ev~k~~~f----------~~f~------~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~ 389 (713)
T PF00343_consen 326 NLALRGSHSVNGVSKLHGEVLKQMVF----------KDFY------ELWPEKFGNVTNGVHPRRWLSQANPELSELITEY 389 (713)
T ss_dssp HHHHHCESEEEESSHHHHHHHHHTTT----------HHHH------HHSGGGEEE----B-TCCCCCCTSHHHHHHHHHH
T ss_pred HHHHHhcccccchHHHHHHHHHHHHh----------hhhh------hcCCceeeccccCccCcccccccCHHHHHHHHHH
Confidence 45777888888888765543333211 1112 12367899999999988885321 11111111
Q ss_pred ----hh---cchhhhc-cCc--------------------cccccccCCCCCCCCCEEEEEeccCccCCHHHH----HHH
Q 003552 546 ----LH---GSIEQLL-FDP--------------------EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL----VEC 593 (811)
Q Consensus 546 ----~~---~~i~~~l-~~~--------------------~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~L----leA 593 (811)
.. ..++++. +.. ....+..|+.-+++...++++-|+.+.|...+. +.-
T Consensus 390 iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~ 469 (713)
T PF00343_consen 390 IGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDR 469 (713)
T ss_dssp HTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHH
T ss_pred hccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHH
Confidence 00 1111110 000 011223465557888889999999999998883 345
Q ss_pred HHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH----cCCCC--cEEEeccccCcCChHHHHHHHH
Q 003552 594 YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT----YKLDG--QFRWIAAQTNRARNGELYRYIA 663 (811)
Q Consensus 594 ~~~l~~~~----~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~----~~L~~--~V~flG~~~~~v~~~el~~~ia 663 (811)
+.++++.- ..+.+++.|.... .|...++.++.+.++++. -.+.+ +|.|+. ..+. .+.+.+-
T Consensus 470 y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFle----nYdv-slA~~li 540 (713)
T PF00343_consen 470 YNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLE----NYDV-SLAEKLI 540 (713)
T ss_dssp HHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEET----T-SH-HHHHHHG
T ss_pred HHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHHHHHhcChhhccceeEEeec----CCcH-HHHHHHh
Confidence 55555421 1356666665433 345555666666666653 23444 789996 3444 5566666
Q ss_pred ccccEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCccccccc--CCcEEEECC
Q 003552 664 DTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--GASGFHIDP 715 (811)
Q Consensus 664 ~aadvfV~PS~--~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~d--g~~G~li~p 715 (811)
.++||-.+.|+ .|+.|.+-+=||.-|.+.++|-.|...|+.+. ..|+|+|-.
T Consensus 541 pg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~ 596 (713)
T PF00343_consen 541 PGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGL 596 (713)
T ss_dssp GG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-
T ss_pred hhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCC
Confidence 67999998875 79999999999999999999999999999864 457888843
No 154
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=96.32 E-value=0.4 Score=51.28 Aligned_cols=138 Identities=14% Similarity=0.053 Sum_probs=79.6
Q ss_pred EEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH----------HHHHcCC--CCcE
Q 003552 576 FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE----------LMKTYKL--DGQF 643 (811)
Q Consensus 576 l~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~----------li~~~~L--~~~V 643 (811)
.|+||.+..||+..+++.-++..+. +..+-++-|-...+ +.+.-+.. .+.+..+ .+.+
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~---------A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~ 256 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP---------AKISIKDHGIPYEYYPKLDCDEPKPAPNSPV 256 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST---------HHHHHHHTT--EEEE-CTGGGG---SSS--E
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC---------ceeeeecCCcccccCccccccCcccCCCCcc
Confidence 7999999999999999988886654 67777777754331 11111110 0001111 2346
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEecCC------CCCCCHHHHHHHHcCC-CEEEcCCCCccc-------ccccCCc
Q 003552 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGL-PTFATCHGGPAE-------IIEHGAS 709 (811)
Q Consensus 644 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~------~E~fGltvlEAMa~Gl-PVIAT~~GG~~E-------iI~dg~~ 709 (811)
..+| +.-++|....++. +...++-+. .+..--|-+|..|||. ||+-+..|...- ++.+.-+
T Consensus 257 ~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 257 PVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred eecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 6777 6778899999996 666555442 3457778999999997 888776665444 3444456
Q ss_pred EEEECCCCHHHHHHHHHHH
Q 003552 710 GFHIDPYHPDQAAELMADF 728 (811)
Q Consensus 710 G~li~p~D~e~lA~aI~~~ 728 (811)
.+.+|-+|.++..++|.++
T Consensus 332 ~I~~De~dle~T~ekl~E~ 350 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEV 350 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHH
T ss_pred eeEeccchHHHHHHHHHHH
Confidence 7889999999999999654
No 155
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=95.97 E-value=1.8 Score=48.09 Aligned_cols=134 Identities=15% Similarity=0.157 Sum_probs=78.7
Q ss_pred CCCCCEEEEEeccCccCCHHHH---HHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003552 569 DRSKPIVFSMARLDHVKNMTGL---VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (811)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgi~~L---leA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (811)
+.+..+++++|.= .-|-+.+ ++|+..+....+ .-++|.|.... .+...++.....-.++|..
T Consensus 217 pE~~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I 281 (400)
T COG4671 217 PEGFDILVSVGGG--ADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISI 281 (400)
T ss_pred CccceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEE
Confidence 3456678888853 3344333 334433333322 34666676655 3444555555555578888
Q ss_pred eccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCccc--ccc------cCCcEEEECCC-
Q 003552 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE--IIE------HGASGFHIDPY- 716 (811)
Q Consensus 646 lG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~E--iI~------dg~~G~li~p~- 716 (811)
+-+. .++..+++. |+..|.=+- =+|+.|-++.|||.+.-..+.+.| .+. -|-..++ .|.
T Consensus 282 ~~f~------~~~~~ll~g-A~~vVSm~G----YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL-~pe~ 349 (400)
T COG4671 282 FEFR------NDFESLLAG-ARLVVSMGG----YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL-LPEN 349 (400)
T ss_pred EEhh------hhHHHHHHh-hheeeeccc----chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee-Cccc
Confidence 8643 357778885 888886433 368999999999999875554443 221 1322333 333
Q ss_pred -CHHHHHHHHHHHH
Q 003552 717 -HPDQAAELMADFF 729 (811)
Q Consensus 717 -D~e~lA~aI~~~l 729 (811)
.++.+|++|...+
T Consensus 350 lt~~~La~al~~~l 363 (400)
T COG4671 350 LTPQNLADALKAAL 363 (400)
T ss_pred CChHHHHHHHHhcc
Confidence 3677777775544
No 156
>PLN00164 glucosyltransferase; Provisional
Probab=95.93 E-value=5 Score=47.12 Aligned_cols=72 Identities=15% Similarity=0.105 Sum_probs=44.0
Q ss_pred cCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCccccc-ccCCcEEEECC-------CCHH
Q 003552 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP-------YHPD 719 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI-~dg~~G~li~p-------~D~e 719 (811)
+++..++... . +.++||.- -| -++++||+++|+|+|+- +..-+...+ +.-+.|+.++. -+.+
T Consensus 346 w~PQ~~iL~h-~-~vg~fvtH---~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e 419 (480)
T PLN00164 346 WAPQKEILAH-A-AVGGFVTH---CG-WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAA 419 (480)
T ss_pred cCCHHHHhcC-c-ccCeEEee---cc-cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHH
Confidence 5666555542 1 12356642 22 34899999999999995 444455444 33356777642 1467
Q ss_pred HHHHHHHHHH
Q 003552 720 QAAELMADFF 729 (811)
Q Consensus 720 ~lA~aI~~~l 729 (811)
+++++|.+++
T Consensus 420 ~l~~av~~vm 429 (480)
T PLN00164 420 ELERAVRSLM 429 (480)
T ss_pred HHHHHHHHHh
Confidence 8888886655
No 157
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.77 E-value=0.16 Score=56.96 Aligned_cols=91 Identities=16% Similarity=0.114 Sum_probs=55.6
Q ss_pred CEEEEEeccC-c-cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003552 573 PIVFSMARLD-H-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (811)
Q Consensus 573 ~iIl~vGRL~-~-~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (811)
.+.++.|+-. + .+.+..+++++.++.+.. ..+++.|.. . .+.+++...+. ..+.+++
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~-~------------~~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFF-K------------GKDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCC-c------------HHHHHHHHhcC---CCcEEec---
Confidence 3444455432 1 355677779998887643 566766553 2 12333433332 2344543
Q ss_pred CcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 003552 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (811)
Q Consensus 651 ~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~ 696 (811)
+.+.+++. ||+.+..| |.+.+|++.+|+|.|..-
T Consensus 228 ------~~~~~m~~-aDlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 ------DTHKALLE-AEFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred ------cHHHHHHh-hhHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 24567774 89877553 888889999999999853
No 158
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.71 E-value=0.82 Score=50.53 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=67.0
Q ss_pred CCCCEEEEEeccCccC--CHH---HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-
Q 003552 570 RSKPIVFSMARLDHVK--NMT---GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF- 643 (811)
Q Consensus 570 ~~k~iIl~vGRL~~~K--gi~---~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V- 643 (811)
+.+.+.+.+|.=+..- +.+ .+++.+..+.+..+ ..+.|..+-..| .+..+.+.+. ++-.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~---~~~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALREL---LKDNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHh---hcCCCceE
Confidence 4566777888644322 223 56666666665544 789998887662 1222333333 3334567
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC
Q 003552 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (811)
Q Consensus 644 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG 699 (811)
.|-+ .+ ..=+..+++. ||.++.+... -.-+-||.++|+||..-...+
T Consensus 213 ~~~~--~~---~nPy~~~La~-ad~i~VT~DS---vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWDG--TG---ENPYLGFLAA-ADAIVVTEDS---VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EecC--CC---CCcHHHHHHh-CCEEEEcCcc---HHHHHHHHHcCCCEEEecCCC
Confidence 5522 22 2235667774 9999988542 335899999999999987666
No 159
>PLN02555 limonoid glucosyltransferase
Probab=95.71 E-value=6 Score=46.44 Aligned_cols=80 Identities=13% Similarity=0.135 Sum_probs=51.6
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC----CCCcccccccC-CcEEEEC
Q 003552 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-ASGFHID 714 (811)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~----~GG~~EiI~dg-~~G~li~ 714 (811)
.+++.+.+ +++..++... . +.++||.- -| -++++||+.+|+|+|+-. ...+...+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45666666 6777666542 1 35667753 22 458999999999999963 34455555554 5677662
Q ss_pred -----C--CCHHHHHHHHHHHH
Q 003552 715 -----P--YHPDQAAELMADFF 729 (811)
Q Consensus 715 -----p--~D~e~lA~aI~~~l 729 (811)
. -+.++++++|.+++
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm 427 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT 427 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh
Confidence 1 14678888887665
No 160
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.69 E-value=1.8 Score=47.32 Aligned_cols=111 Identities=13% Similarity=0.135 Sum_probs=63.8
Q ss_pred ccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHH
Q 003552 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (811)
Q Consensus 583 ~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~i 662 (811)
..++++.+.+++..+++.. .|++-.. +..++..+.+. ++... ....+.+. ++
T Consensus 199 g~~~~~~~~~li~~l~k~g----iV~ipr~---------------~~~~eife~~~---n~i~p-----k~~vD~l~-Ll 250 (346)
T COG1817 199 GDRGISVLPDLIKELKKYG----IVLIPRE---------------KEQAEIFEGYR---NIIIP-----KKAVDTLS-LL 250 (346)
T ss_pred cccchhhHHHHHHHHHhCc----EEEecCc---------------hhHHHHHhhhc---cccCC-----cccccHHH-HH
Confidence 4677777888888886643 3444332 12344455442 12221 11222222 22
Q ss_pred HccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC---CcccccccCCcEEEECCCCHHHHHHHHHHHH
Q 003552 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (811)
Q Consensus 663 a~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G---G~~EiI~dg~~G~li~p~D~e~lA~aI~~~l 729 (811)
.- |++++ .+-|..--||...|+|.|.+.-| +..+... +.|.+++.+|+.+..+...+.+
T Consensus 251 yy-a~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 251 YY-ATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hh-hheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 21 55655 45577789999999999998744 3333332 3588888888886666664433
No 161
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=95.19 E-value=8.5 Score=44.90 Aligned_cols=140 Identities=17% Similarity=0.181 Sum_probs=72.8
Q ss_pred CCCEEEEEeccCc--cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCC-CCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003552 571 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDV-NKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (811)
Q Consensus 571 ~k~iIl~vGRL~~--~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~-~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (811)
+..+.++.|.+.. .+.+..+..++..+.. +++++=..+.. ..+.+.+..........+.++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~-----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGKR-----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcCC-----CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 4567888887653 4556666667666532 44544222110 000000000000001222222 235555556
Q ss_pred cccCcCChHHHHHHHHcccc--EEEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCcccccccC-CcEEEEC-----C
Q 003552 648 AQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID-----P 715 (811)
Q Consensus 648 ~~~~~v~~~el~~~ia~aad--vfV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI~dg-~~G~li~-----p 715 (811)
+++..++.. + .. +||.- +-.++++||+.+|+|+++- +...+...+.+. +.|+-+. .
T Consensus 334 ----W~PQ~~iL~---h-~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 401 (455)
T PLN02152 334 ----WCSQIEVLR---H-RAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGL 401 (455)
T ss_pred ----eCCHHHHhC---C-cccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCc
Confidence 666666554 2 44 45542 2245899999999999996 344455555441 2455542 1
Q ss_pred CCHHHHHHHHHHHH
Q 003552 716 YHPDQAAELMADFF 729 (811)
Q Consensus 716 ~D~e~lA~aI~~~l 729 (811)
-+.++++++|.+++
T Consensus 402 ~~~e~l~~av~~vm 415 (455)
T PLN02152 402 VERGEIRRCLEAVM 415 (455)
T ss_pred CcHHHHHHHHHHHH
Confidence 25788888887766
No 162
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.04 E-value=0.092 Score=46.63 Aligned_cols=71 Identities=17% Similarity=0.086 Sum_probs=48.2
Q ss_pred cCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003552 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (811)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~--~lva~lla~~lgvp~v~t~ 437 (811)
.+.++..+|+... ......|.+-....-+...+. +++.||||+|...+ +.-+.+-|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ili---rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILI---RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHH---HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 3688999988753 223444444333322333333 45999999999866 4467788899999999999
Q ss_pred cCCc
Q 003552 438 HALE 441 (811)
Q Consensus 438 H~l~ 441 (811)
|++.
T Consensus 83 HSLf 86 (90)
T PF08288_consen 83 HSLF 86 (90)
T ss_pred cccc
Confidence 9874
No 163
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=94.84 E-value=0.0013 Score=65.30 Aligned_cols=91 Identities=16% Similarity=0.256 Sum_probs=56.3
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC--------cccccccCCcEEE
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFH 712 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG--------~~EiI~dg~~G~l 712 (811)
.+|.+.++.. ++..+|+. ||++|.- +-+.|+.|++++|+|.|.-...+ ....+.....|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6789988433 37778885 9998864 33579999999999998865555 2333333334544
Q ss_pred ECCC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003552 713 IDPY--HPDQAAELMADFFGKCKENPSHWKKISDGG 746 (811)
Q Consensus 713 i~p~--D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 746 (811)
+... +++.+.++| ..+.+++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i----~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAI----EELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHH----HCHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHH----HHHHcCcHHHHHHHHHH
Confidence 4322 256677777 56668888777666554
No 164
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.50 E-value=0.68 Score=49.84 Aligned_cols=140 Identities=18% Similarity=0.283 Sum_probs=79.9
Q ss_pred CCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003552 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (811)
Q Consensus 571 ~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (811)
.+-+++++|.-|+ ||++ .+.++.+.. .++++.||-+...| ....+.+.++++ +++.++-
T Consensus 158 ~r~ilI~lGGsDp-k~lt--~kvl~~L~~--~~~nl~iV~gs~~p----------~l~~l~k~~~~~---~~i~~~~--- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLT--LKVLAELEQ--KNVNLHIVVGSSNP----------TLKNLRKRAEKY---PNINLYI--- 216 (318)
T ss_pred hheEEEEccCCCh-hhhH--HHHHHHhhc--cCeeEEEEecCCCc----------chhHHHHHHhhC---CCeeeEe---
Confidence 3447888887776 6654 344444443 23677665442221 144555555554 6788764
Q ss_pred CcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEE----cCCCCccccccc----CCcEEEECCCCHHHHH
Q 003552 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPAEIIEH----GASGFHIDPYHPDQAA 722 (811)
Q Consensus 651 ~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIA----T~~GG~~EiI~d----g~~G~li~p~D~e~lA 722 (811)
...++.++|.+ +|+.+.. -|.|+.||...|+|..+ .+.-..+..... ...|++.. .....
T Consensus 217 ---~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l~---~~~~~ 284 (318)
T COG3980 217 ---DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHLK---DLAKD 284 (318)
T ss_pred ---cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCCc---hHHHH
Confidence 34568889987 8877643 38999999999999333 222222221111 12455532 23333
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHH
Q 003552 723 ELMADFFGKCKENPSHWKKISDGGL 747 (811)
Q Consensus 723 ~aI~~~l~~l~~dp~~~~~ms~~a~ 747 (811)
..+ ..+.+|+..++.++..+.
T Consensus 285 ~~~----~~i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEI----LQIQKDYARRKNLSFGSK 305 (318)
T ss_pred HHH----HHhhhCHHHhhhhhhccc
Confidence 334 344578888777665443
No 165
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=94.26 E-value=2.6 Score=45.00 Aligned_cols=113 Identities=9% Similarity=0.034 Sum_probs=66.0
Q ss_pred CCCCCEEEEEeccCccCCH--HHHHHHHHHhhccC--CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCcE
Q 003552 569 DRSKPIVFSMARLDHVKNM--TGLVECYGKNSQLR--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQF 643 (811)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgi--~~LleA~~~l~~~~--~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~-~~L~~~V 643 (811)
.+..++-+++|.-.+.-.. +.+.+....+.+.. ....+++--+... -+..+.+++. +.-..-+
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~i 226 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRT------------PDTVKSILKNNLNSSPGI 226 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCC------------cHHHHHHHHhccccCcee
Confidence 4567788889976664444 22222222222211 2456777666554 2345556655 4444557
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc
Q 003552 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (811)
Q Consensus 644 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~ 700 (811)
.|-+.-++.-+ ...+++ +||.++.....-. ..-||.+.|+||++-...+.
T Consensus 227 ~w~~~d~g~NP---Y~~~La-~Adyii~TaDSin---M~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 227 VWNNEDTGYNP---YIDMLA-AADYIISTADSIN---MCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred EeCCCCCCCCc---hHHHHh-hcceEEEecchhh---hhHHHhccCCCeEEEecCCc
Confidence 77764333223 345666 5999998865322 36899999999998754443
No 166
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=93.72 E-value=18 Score=42.50 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=49.7
Q ss_pred cEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC----CCCccccc-ccCCcEEEECC-
Q 003552 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHIDP- 715 (811)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~----~GG~~EiI-~dg~~G~li~p- 715 (811)
.+.+.+ +++..++...- +.+.||.- +--++++||+.+|+|+|+-. ...+...+ +.-+.|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~--~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQ--AVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCc--ccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 466666 66666665521 12346542 23458999999999999974 33455555 34456777753
Q ss_pred ---CCHHHHHHHHHHHH
Q 003552 716 ---YHPDQAAELMADFF 729 (811)
Q Consensus 716 ---~D~e~lA~aI~~~l 729 (811)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 36678888886665
No 167
>PLN03015 UDP-glucosyl transferase
Probab=92.93 E-value=23 Score=41.47 Aligned_cols=72 Identities=19% Similarity=0.169 Sum_probs=42.4
Q ss_pred cCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCC----CCccccc-ccCCcEEEEC------CCCHHH
Q 003552 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEII-EHGASGFHID------PYHPDQ 720 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~----GG~~EiI-~dg~~G~li~------p~D~e~ 720 (811)
+++..++... . +.+.||.- +--++++||+.+|+|+++-.. .-+...+ +.-..|.-+. .-..++
T Consensus 342 W~PQ~~vL~h-~-~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSH-R-SIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhcc-C-ccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 5666666552 1 23446643 223489999999999999643 3344444 3334566553 124567
Q ss_pred HHHHHHHHH
Q 003552 721 AAELMADFF 729 (811)
Q Consensus 721 lA~aI~~~l 729 (811)
++++|..++
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 777776655
No 168
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=91.73 E-value=25 Score=39.09 Aligned_cols=100 Identities=16% Similarity=0.029 Sum_probs=61.3
Q ss_pred CCEEEEEecc-CccCCH--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC--Cc-EEE
Q 003552 572 KPIVFSMARL-DHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--GQ-FRW 645 (811)
Q Consensus 572 k~iIl~vGRL-~~~Kgi--~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~--~~-V~f 645 (811)
+.+++..|.- .+.|.. +...+.+..+.+ .+++++++|+..+ .+...++.+..+-. .+ +.+
T Consensus 181 ~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e------------~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 181 PIIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh------------HHHHHHHHHhcccccccceeec
Confidence 3445566542 345543 455666666543 3678888887644 33334444433211 12 445
Q ss_pred eccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 646 lG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
.| ..+-.++..+++. ++++|..- +- .+-=|-|.|+|+|+-
T Consensus 247 ~g----~~sL~el~ali~~-a~l~I~nD---TG--p~HlAaA~g~P~val 286 (348)
T PRK10916 247 AG----ETQLEQAVILIAA-CKAIVTND---SG--LMHVAAALNRPLVAL 286 (348)
T ss_pred cC----CCCHHHHHHHHHh-CCEEEecC---Ch--HHHHHHHhCCCEEEE
Confidence 56 6678999999996 99999762 22 355688999999984
No 169
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=91.27 E-value=1.2 Score=49.84 Aligned_cols=132 Identities=12% Similarity=0.166 Sum_probs=64.2
Q ss_pred ccCCCCCCCCCEEEEEeccCccCCH------HHH--HHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003552 563 HVGTLSDRSKPIVFSMARLDHVKNM------TGL--VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (811)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgi------~~L--leA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li 634 (811)
.+|+ +.++.+|+|+-........ ... .+.+..+ ..+++.+++-.-.. +....
T Consensus 185 ~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~li~k~Hp~----------------~~~~~ 244 (369)
T PF04464_consen 185 KLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFL--LKNNYVLIIKPHPN----------------MKKKF 244 (369)
T ss_dssp HTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHH--HTTTEEEEE--SHH----------------HHTT-
T ss_pred Hhcc--CCCCcEEEEeeccccccccccccccccccCHHHHHHH--hCCCcEEEEEeCch----------------hhhch
Confidence 3555 5677799999765443222 111 2222222 23577777655321 11112
Q ss_pred HH-cCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc--CC-------CCccccc
Q 003552 635 KT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT--CH-------GGPAEII 704 (811)
Q Consensus 635 ~~-~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT--~~-------GG~~EiI 704 (811)
.. ....++|.++. +..+++.++.. +|++|. -++-++.|++.+++|||-- +. |...++
T Consensus 245 ~~~~~~~~~i~~~~------~~~~~~~ll~~-aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~- 311 (369)
T PF04464_consen 245 KDFKEDNSNIIFVS------DNEDIYDLLAA-ADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY- 311 (369)
T ss_dssp ---TT-TTTEEE-T------T-S-HHHHHHT--SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-
T ss_pred hhhhccCCcEEECC------CCCCHHHHHHh-cCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-
Confidence 11 34567888875 23368888885 999884 3466899999999999954 32 222332
Q ss_pred ccCCcEEEECCCCHHHHHHHHHHHH
Q 003552 705 EHGASGFHIDPYHPDQAAELMADFF 729 (811)
Q Consensus 705 ~dg~~G~li~p~D~e~lA~aI~~~l 729 (811)
.+...|-.+. +.+++.++|.+++
T Consensus 312 ~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 312 EEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TTSSSS-EES--SHHHHHHHHTTHH
T ss_pred HhhCCCceeC--CHHHHHHHHHhhh
Confidence 2333455554 7899988886554
No 170
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=90.75 E-value=0.61 Score=54.53 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=73.6
Q ss_pred CCCEEEEEeccCcc---CCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003552 571 SKPIVFSMARLDHV---KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (811)
Q Consensus 571 ~k~iIl~vGRL~~~---Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (811)
+..++++.|.+... +-...++++++++ |+ ++++.-++.. .. .+++++....
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~------------~~---------~l~~n~~~~~ 329 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP------------PE---------NLPKNVLIVK 329 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS----TT-EEEEEETCSH------------GC---------HHHTTEEEES
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC----CC-cccccccccc------------cc---------cccceEEEec
Confidence 45678888987631 1133455555544 44 6776655532 00 1235677766
Q ss_pred cccCcCChHHHHHHHHc-cccEEEecCCCCCCCHHHHHHHHcCCCEEEcCC----CCcccccccCCcEEEECCCC--HHH
Q 003552 648 AQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEHGASGFHIDPYH--PDQ 720 (811)
Q Consensus 648 ~~~~~v~~~el~~~ia~-aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~----GG~~EiI~dg~~G~li~p~D--~e~ 720 (811)
+++..++.. + ..++||.= |--.++.||+.+|+|+|+-.. ..++..+++.+.|..++..+ .++
T Consensus 330 ----W~PQ~~lL~---hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~ 398 (500)
T PF00201_consen 330 ----WLPQNDLLA---HPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEE 398 (500)
T ss_dssp ----S--HHHHHT---STTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHH
T ss_pred ----cccchhhhh---cccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHH
Confidence 777666643 2 13456632 224589999999999999743 34556666666788887554 466
Q ss_pred HHHHHHHHHHhhcCCHHHHHH
Q 003552 721 AAELMADFFGKCKENPSHWKK 741 (811)
Q Consensus 721 lA~aI~~~l~~l~~dp~~~~~ 741 (811)
+.++|.+ +++|+.+.+.
T Consensus 399 l~~ai~~----vl~~~~y~~~ 415 (500)
T PF00201_consen 399 LRAAIRE----VLENPSYKEN 415 (500)
T ss_dssp HHHHHHH----HHHSHHHHHH
T ss_pred HHHHHHH----HHhhhHHHHH
Confidence 7777755 4478876544
No 171
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.86 E-value=2 Score=46.14 Aligned_cols=98 Identities=16% Similarity=0.116 Sum_probs=64.0
Q ss_pred EEEEEeccCccC--CHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003552 574 IVFSMARLDHVK--NMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (811)
Q Consensus 574 iIl~vGRL~~~K--gi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (811)
+++..|.-.+.| ..+...+.+..+.+. +++++++|+..+ .+..+++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 444444444444 446777777777654 689999987544 344444555443233345566
Q ss_pred cCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
..+..++..+++. +|++|.+. + | ++--|.+.|+|+|+-
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~D---s-g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTND---S-G-PMHLAAALGTPTVAL 223 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeC---C-H-HHHHHHHcCCCEEEE
Confidence 5678899999996 99999873 2 3 344456999999995
No 172
>PLN03004 UDP-glycosyltransferase
Probab=89.78 E-value=4.9 Score=46.80 Aligned_cols=146 Identities=10% Similarity=0.085 Sum_probs=79.7
Q ss_pred CCCCEEEEEeccCc--cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHH-HHHHHHcCCCCcEEEe
Q 003552 570 RSKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKM-HELMKTYKLDGQFRWI 646 (811)
Q Consensus 570 ~~k~iIl~vGRL~~--~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l-~~li~~~~L~~~V~fl 646 (811)
++..+.++.|.... .+.+..|..++.... . +|+++=..+...+ .+..... ..+ ....++.+ ..++.+.
T Consensus 269 ~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~-~~~~~~~--~~lp~gf~er~~-~~g~~v~ 339 (451)
T PLN03004 269 EKSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELE-KTELDLK--SLLPEGFLSRTE-DKGMVVK 339 (451)
T ss_pred CCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCcccc-ccccchh--hhCChHHHHhcc-CCcEEEE
Confidence 34567888888743 345555666665542 2 5555544321000 0000000 000 11122222 2356666
Q ss_pred ccccCcCChHHHHHHHHccccE--EEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCccccccc-CCcEEEECC----
Q 003552 647 AAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP---- 715 (811)
Q Consensus 647 G~~~~~v~~~el~~~ia~aadv--fV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI~d-g~~G~li~p---- 715 (811)
+ +++..++.. ..++ ||.= +--++++||+++|+|+|+- +...+...+.+ -+.|..++.
T Consensus 340 ~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~ 407 (451)
T PLN03004 340 S----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETG 407 (451)
T ss_pred e----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCC
Confidence 6 666666554 3666 6632 2245899999999999996 44556656643 357887753
Q ss_pred -CCHHHHHHHHHHHHHhhcCCHHHHH
Q 003552 716 -YHPDQAAELMADFFGKCKENPSHWK 740 (811)
Q Consensus 716 -~D~e~lA~aI~~~l~~l~~dp~~~~ 740 (811)
-+.++++++|.+++ .|+++++
T Consensus 408 ~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 408 FVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred ccCHHHHHHHHHHHh----cCHHHHH
Confidence 25678888886655 5655443
No 173
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=88.79 E-value=20 Score=38.39 Aligned_cols=104 Identities=15% Similarity=0.174 Sum_probs=61.2
Q ss_pred CCCCCEEEEEeccCcc-------CCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003552 569 DRSKPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (811)
Q Consensus 569 ~~~k~iIl~vGRL~~~-------Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L~ 640 (811)
..+++.|++....... .+...+.+.+..+.+..|+.+++|== .|......+ . ...++. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~------~----~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNK------Y----SYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCC------h----hHhhhhhcC-
Confidence 5678889998887664 23455666666666666778876543 332111111 0 222222 33
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~ 696 (811)
.++.++. +...++.++.. +|.++.- -+.+-+||+.+|+||++-.
T Consensus 182 ~~~~~~~------~~~~~~~Ll~~-s~~Vvti-----nStvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 182 PNVVIID------DDVNLYELLEQ-SDAVVTI-----NSTVGLEALLHGKPVIVFG 225 (269)
T ss_pred CCeEEEC------CCCCHHHHHHh-CCEEEEE-----CCHHHHHHHHcCCceEEec
Confidence 3444443 12346667775 6665532 2668899999999999963
No 174
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=85.30 E-value=4.6 Score=42.33 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=61.1
Q ss_pred CCCCEEEEEeccCccCCHHH--HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003552 570 RSKPIVFSMARLDHVKNMTG--LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (811)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgi~~--LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (811)
.++.+++..|.-.+.|.... ..+.+..+.+.+ ++++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 44567777777677776544 777777776653 78888888644 11222233333221 12577887
Q ss_pred cccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 648 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
..+..++..+++. +|++|.+ ++. .+-=|.|.|+|+|+-
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~---Dtg--~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGN---DTG--PMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEE---SSH--HHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEec---CCh--HHHHHHHHhCCEEEE
Confidence 6778999999996 9999987 332 356688999999996
No 175
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=84.85 E-value=22 Score=39.83 Aligned_cols=161 Identities=13% Similarity=0.175 Sum_probs=107.0
Q ss_pred cCCCC-CCCCCEEEEEeccCccCCHHHHHHHHHHhhccCC-CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC--
Q 003552 564 VGTLS-DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-- 639 (811)
Q Consensus 564 ~g~l~-~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~-~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L-- 639 (811)
+|... .+.+.+-+|=-+++-.|+-..=+-+..+.-+..| .+..+.|-.... .++...+..++..+.+
T Consensus 181 FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~---------~ke~~~F~~f~~~ldlvr 251 (364)
T PF10933_consen 181 FGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYH---------LKEHPTFVNFANSLDLVR 251 (364)
T ss_pred cccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchh---------hhcCHHHHHHHHhhHHhh
Confidence 44432 2445556666667777764332222222222223 356666665543 2334566677776666
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHH
Q 003552 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (811)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e 719 (811)
++...|-| +.+ ++.++++..|++|.-.+.-+.--.-.||+--|=|.|-. ...+.+ .|+..+..|..
T Consensus 252 ~gkasfeg----R~~---~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHN-----S~~l~d--~GYYY~~fD~~ 317 (364)
T PF10933_consen 252 DGKASFEG----RFD---FPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHN-----SPLLKD--VGYYYPDFDAF 317 (364)
T ss_pred cCeeEEee----ecC---hHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccC-----cchhcc--cCcCCCCccHH
Confidence 57788988 443 67778778999998777667777889999999999975 334433 79999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003552 720 QAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (811)
Q Consensus 720 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 750 (811)
+=++++.+++. ++++.++...+++++.+
T Consensus 318 ~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l 345 (364)
T PF10933_consen 318 EGARQLLRAIR---EHDADLDAYRARARRLL 345 (364)
T ss_pred HHHHHHHHHHH---HccccHHHHHHHHHHHH
Confidence 99999988875 46666777777777766
No 176
>PLN02534 UDP-glycosyltransferase
Probab=84.71 E-value=92 Score=36.82 Aligned_cols=77 Identities=10% Similarity=0.070 Sum_probs=45.5
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccE--EEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----cccccc-cCCcEEEE
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIE-HGASGFHI 713 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadv--fV~PS~~E~fGltvlEAMa~GlPVIAT~~GG----~~EiI~-dg~~G~li 713 (811)
.++.+.| +++..++.. ..++ ||.- +-.++++||+.+|+|+|+-...+ +...+. .-+.|+-+
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 3466656 666666554 2444 6643 33568999999999999974432 323332 21233332
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 003552 714 D---------------PYHPDQAAELMADFF 729 (811)
Q Consensus 714 ~---------------p~D~e~lA~aI~~~l 729 (811)
. --+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025678888887766
No 177
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=84.55 E-value=9.5 Score=41.78 Aligned_cols=146 Identities=16% Similarity=0.168 Sum_probs=82.3
Q ss_pred HHhhcCCCcc----hHHHHhcCCCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceee
Q 003552 257 LDILQAPDPS----TLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISP 332 (811)
Q Consensus 257 ~~~~~~p~~~----~le~f~~~~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~ 332 (811)
.-++|+..|. .-+..-...|.-=|--+|...|.|| -|-.+.+. .|.+.|.++||.|.
T Consensus 23 ITlvEs~~~~h~~~a~~ll~~l~p~tG~a~viGITG~PG----------aGKSTli~--------~L~~~l~~~G~rVa- 83 (323)
T COG1703 23 ITLVESRRPDHRALARELLRALYPRTGNAHVIGITGVPG----------AGKSTLIE--------ALGRELRERGHRVA- 83 (323)
T ss_pred HHHHhcCCchhhhHHHHHHHHHhhcCCCCcEEEecCCCC----------CchHHHHH--------HHHHHHHHCCcEEE-
Confidence 3355555554 3333334455444444454556654 25666666 77888999999999
Q ss_pred ceeEEecc--CCCCCCCcccc--ceeeecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHHHHHHHHcCCCc
Q 003552 333 KILIVTRL--IPDAKGTTCNQ--RLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFP 408 (811)
Q Consensus 333 ~ilVvT~~--~p~~~~~~~~~--~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~~~~~P 408 (811)
|++-. .|-..|....+ +.+.....+|+.|-.+|.+...| . +..-+.++...+.+ ..+
T Consensus 84 ---VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG----G---------lS~at~~~i~~ldA---aG~ 144 (323)
T COG1703 84 ---VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG----G---------LSRATREAIKLLDA---AGY 144 (323)
T ss_pred ---EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch----h---------hhHHHHHHHHHHHh---cCC
Confidence 55443 33333433332 34445555678888888776533 1 12233344444433 489
Q ss_pred eEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003552 409 DFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (811)
Q Consensus 409 DlIh~h~~~~~lva~lla~~lgvp~v~t~H~l 440 (811)
|+|+......+-.-.-++....+-++++..+.
T Consensus 145 DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 145 DVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred CEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 99998776554444444555566666666654
No 178
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=84.07 E-value=7.1 Score=43.58 Aligned_cols=103 Identities=11% Similarity=0.063 Sum_probs=65.4
Q ss_pred CCCEEEEEeccCccCCH--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003552 571 SKPIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (811)
Q Consensus 571 ~k~iIl~vGRL~~~Kgi--~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (811)
++.+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ ++.+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e----------~e~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK----------DDLACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh----------HHHHHHHHHHHhcCCCccccccC-
Confidence 45566777765566654 466666666654 3578888876533 11222334444332223355667
Q ss_pred ccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 649 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
..+-.++..+++. +++||.. ++- .+-=|-|.|+|+|+-
T Consensus 250 ---~~sL~el~ali~~-a~l~v~n---DSG--p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGV---DSA--PAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEec---CCH--HHHHHHHcCCCEEEE
Confidence 6788999999996 9999976 322 345577899999985
No 179
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=82.42 E-value=1.7 Score=43.42 Aligned_cols=60 Identities=18% Similarity=0.225 Sum_probs=35.8
Q ss_pred CCCceEEEEcCCCchHH-HHHHHH-H-c-CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEe
Q 003552 405 QGFPDFIIGNYSDGNLV-ASLLAY-K-M-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lv-a~lla~-~-l-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (811)
..+||+|+|.++..+.+ ...+.+ . . ++|+++.+-++.... ..| .-..+|..++
T Consensus 87 ~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-----~~W------------------~~~~~D~y~V 143 (169)
T PF06925_consen 87 EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-----PFW------------------IHPGVDRYFV 143 (169)
T ss_pred hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-----cCe------------------ecCCCCEEEE
Confidence 46999999988875444 333333 2 3 477665444321100 011 2347999999
Q ss_pred cCHHHHh
Q 003552 481 STYQEIA 487 (811)
Q Consensus 481 ~S~~~~~ 487 (811)
.|++.++
T Consensus 144 ase~~~~ 150 (169)
T PF06925_consen 144 ASEEVKE 150 (169)
T ss_pred CCHHHHH
Confidence 9988766
No 180
>PLN02167 UDP-glycosyltransferase family protein
Probab=82.23 E-value=23 Score=41.46 Aligned_cols=79 Identities=16% Similarity=0.110 Sum_probs=48.4
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC----CCCccc-ccccCCcEEEECC
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAE-IIEHGASGFHIDP 715 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~----~GG~~E-iI~dg~~G~li~p 715 (811)
++..+.+ +++..++...= +.++||.- -| -++++||+++|+|+|+-. ..-+.. +++.-+.|+.+..
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSH---CG-WNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEee---CC-cccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3445555 67776665421 24567753 22 238999999999999963 333443 2444456776642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 003552 716 ---------YHPDQAAELMADFF 729 (811)
Q Consensus 716 ---------~D~e~lA~aI~~~l 729 (811)
-+.++++++|.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 25677888886665
No 181
>PLN02764 glycosyltransferase family protein
Probab=81.86 E-value=50 Score=38.55 Aligned_cols=72 Identities=6% Similarity=0.032 Sum_probs=46.5
Q ss_pred cCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC----Cccccccc-CCcEEEECC-----CCHHHH
Q 003552 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEH-GASGFHIDP-----YHPDQA 721 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~G----G~~EiI~d-g~~G~li~p-----~D~e~l 721 (811)
+++..++... . +.++||.- +--++++||+.+|+|+++-... .+...+.+ -..|+.+.+ -+.+++
T Consensus 324 W~PQ~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 324 WVQQPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred CCCHHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 6777776652 1 24567753 3356899999999999997433 35555543 356766532 266788
Q ss_pred HHHHHHHH
Q 003552 722 AELMADFF 729 (811)
Q Consensus 722 A~aI~~~l 729 (811)
.+++.+++
T Consensus 398 ~~av~~vm 405 (453)
T PLN02764 398 RDAINSVM 405 (453)
T ss_pred HHHHHHHh
Confidence 88886655
No 182
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=81.36 E-value=4.6 Score=40.40 Aligned_cols=111 Identities=11% Similarity=0.082 Sum_probs=58.5
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCH
Q 003552 405 QGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (811)
Q Consensus 405 ~~~PDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (811)
...+|+|++.+-. ...+..+.-...++|.++.+|..... ||.+...-++. .|.+ ....+.-.||.|+.+|.
T Consensus 57 ~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~-YP~~~~~~rd~--~~~~-----~ni~saLaAD~v~FNS~ 128 (168)
T PF12038_consen 57 SHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLA-YPVSPGQERDF--QYGM-----NNIYSALAADRVVFNSA 128 (168)
T ss_pred ccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCccc-CCCCCCccccc--cHHH-----HHHHHHHhceeeeecch
Confidence 3467999977543 23333333344679999999986443 34333222221 1211 13345668999999997
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCC
Q 003552 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA 528 (811)
Q Consensus 484 ~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGv 528 (811)
--.+..-+.+.++-+ .||...- ..-++...+|..|+|+|+
T Consensus 129 ~nr~sFL~~~~~fL~----~~PD~~p-~~~~~~I~~Ks~VL~~pi 168 (168)
T PF12038_consen 129 FNRDSFLDGIPSFLK----RMPDHRP-KGLVERIRAKSQVLPVPI 168 (168)
T ss_pred hhHHHHHHHHHHHHH----HCCCCCc-hhHHHHHhccCeecCCCC
Confidence 766544444444432 1332111 111122256777777764
No 183
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=80.06 E-value=1.2e+02 Score=34.75 Aligned_cols=101 Identities=14% Similarity=0.205 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC-ccccccc
Q 003552 628 EKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-PAEIIEH 706 (811)
Q Consensus 628 ~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG-~~EiI~d 706 (811)
.-.+.++....-..+|.+.. +.. ..++...++. +|++|-.-+ -+++=||+.|+|+|+-.... ...+.++
T Consensus 253 ~va~~ia~~~~~~~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~ 322 (385)
T COG2327 253 AVADAIAQLVLDSAEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQD 322 (385)
T ss_pred HHHHHHHhhcCCccceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHH
Confidence 33344444443346777764 122 3566778885 888884322 25788999999999964433 2223322
Q ss_pred -CCcEE--EECCCCHHHHHHHHHHHHHhhcCCHHHHHH
Q 003552 707 -GASGF--HIDPYHPDQAAELMADFFGKCKENPSHWKK 741 (811)
Q Consensus 707 -g~~G~--li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ 741 (811)
|..|+ .+.|.|.+.+.+...+++ .++++.+++
T Consensus 323 ~gl~~~~~~i~~~~~~~l~~~~~e~~---~~~~~~~~~ 357 (385)
T COG2327 323 LGLPGFAIDIDPLDAEILSAVVLERL---TKLDELRER 357 (385)
T ss_pred cCCCcccccCCCCchHHHHHHHHHHH---hccHHHHhh
Confidence 33444 456777888888877665 356665444
No 184
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=79.73 E-value=12 Score=41.35 Aligned_cols=99 Identities=15% Similarity=0.016 Sum_probs=62.3
Q ss_pred CCEEEEEec-cCccCCH--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003552 572 KPIVFSMAR-LDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (811)
Q Consensus 572 k~iIl~vGR-L~~~Kgi--~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (811)
+.+++..|. ..+.|.. +...+.+..+.+. +.+++++|+..+ .+...++.+..+ ...+.+.|
T Consensus 175 ~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l~g- 238 (334)
T TIGR02195 175 PIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKD------------HPAGNEIEALLP-GELRNLAG- 238 (334)
T ss_pred CEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhh------------HHHHHHHHHhCC-cccccCCC-
Confidence 334455554 3455554 4677777666542 478899987644 233334433322 12233666
Q ss_pred ccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 649 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
..+-.++..+++. +|++|.. ++- .+-=|.|.|+|+|+-
T Consensus 239 ---~~sL~el~ali~~-a~l~I~~---DSG--p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 239 ---ETSLDEAVDLIAL-AKAVVTN---DSG--LMHVAAALNRPLVAL 276 (334)
T ss_pred ---CCCHHHHHHHHHh-CCEEEee---CCH--HHHHHHHcCCCEEEE
Confidence 6788999999996 9999976 322 355677999999984
No 185
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=78.54 E-value=7.1 Score=35.27 Aligned_cols=84 Identities=13% Similarity=0.164 Sum_probs=57.1
Q ss_pred EEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHH--HHHHHHccccEEEecCCCCCCC---H
Q 003552 606 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE--LYRYIADTKGAFVQPAFYEAFG---L 680 (811)
Q Consensus 606 LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~e--l~~~ia~aadvfV~PS~~E~fG---l 680 (811)
++|||+-.. ....+++.++++|.. ..+.|... .....+ +...+.+ +|++|++..+=+.. .
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 578888333 257888999998864 44444333 233334 8888885 99999987654444 3
Q ss_pred HHHHHHHcCCCEEEcCCCCccccc
Q 003552 681 TVVEAMTCGLPTFATCHGGPAEII 704 (811)
Q Consensus 681 tvlEAMa~GlPVIAT~~GG~~EiI 704 (811)
+--+|-..|+|++.++..|...+.
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHH
Confidence 456778889999999877665543
No 186
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=77.73 E-value=18 Score=37.38 Aligned_cols=39 Identities=15% Similarity=0.266 Sum_probs=26.9
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCC
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 343 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~p~ 343 (811)
|||++....|+-.+ | +. .|.+.|++.||+|. |+++....
T Consensus 1 M~ILlTNDDGi~a~----------G----i~--------aL~~~L~~~g~~V~----VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGIDAP----------G----IR--------ALAKALSALGHDVV----VVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-TTSH----------H----HH--------HHHHHHTTTSSEEE----EEEESSST
T ss_pred CeEEEEcCCCCCCH----------H----HH--------HHHHHHHhcCCeEE----EEeCCCCC
Confidence 89999999998321 2 33 56677877789999 99877543
No 187
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=77.72 E-value=1.1e+02 Score=33.13 Aligned_cols=86 Identities=12% Similarity=0.098 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccc
Q 003552 587 MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK 666 (811)
Q Consensus 587 i~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aa 666 (811)
+..+.+++..+.+.. +.+++++.-... .| .+..+++.+.+.-...| +. ..+..|+...++. +
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 456777777765542 455655553321 11 23334444444333333 23 4567899999996 9
Q ss_pred cEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 667 GAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 667 dvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
+++|--.+. ..+=|+.+|+|+++-
T Consensus 252 ~~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEechH-----HHHHHHHcCCCEEEe
Confidence 987754332 478899999999975
No 188
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=76.18 E-value=17 Score=40.33 Aligned_cols=102 Identities=14% Similarity=0.083 Sum_probs=63.5
Q ss_pred CCEEEEEeccCccCC--HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003552 572 KPIVFSMARLDHVKN--MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (811)
Q Consensus 572 k~iIl~vGRL~~~Kg--i~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 649 (811)
+.+++..|.-.+.|. .+...+.+..+.+ .+.+++++|+..+ ++.+..+++.+..+-..-+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~----------~e~~~~~~i~~~~~~~~~~~l~g-- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK----------DELAMVNEIAQGCQTPRVTSLAG-- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH----------HHHHHHHHHHhhCCCCcccccCC--
Confidence 345566665445554 4556666666654 3578889886432 11222333333333222344666
Q ss_pred cCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 650 ~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
..+-.++..+++. ++++|.. ++- .+-=|.|.|+|+|+=
T Consensus 248 --~~sL~el~ali~~-a~l~Vs~---DSG--p~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 --KLTLPQLAALIDH-ARLFIGV---DSV--PMHMAAALGTPLVAL 285 (344)
T ss_pred --CCCHHHHHHHHHh-CCEEEec---CCH--HHHHHHHcCCCEEEE
Confidence 7788999999996 9999977 332 356688999999985
No 189
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=76.15 E-value=19 Score=39.35 Aligned_cols=99 Identities=14% Similarity=0.005 Sum_probs=64.5
Q ss_pred CCCEEEEEeccCccCCH--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003552 571 SKPIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (811)
Q Consensus 571 ~k~iIl~vGRL~~~Kgi--~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (811)
++.+++..|.=.+.|.. +...+.+..+.+. +++++++|+++. +.+...++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~---~~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP---GAVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC---CCeecC-
Confidence 44566777754566655 4666777666542 578888866554 1333444444332 235666
Q ss_pred ccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 649 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
..+-.++..+++. |+++|.. ++- .+-=|-|.|+|+|+-
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~---DSg--p~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGV---DTG--LTHLAAALDKPTVTL 279 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeC---CCh--HHHHHHHcCCCEEEE
Confidence 6788999999996 9999987 332 345577889999985
No 190
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=75.88 E-value=31 Score=41.22 Aligned_cols=194 Identities=12% Similarity=0.092 Sum_probs=118.1
Q ss_pred cccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003552 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (811)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~- 640 (811)
..+|+ +.+..++...-.|- |=-...++.+.++.+.-|+-.|++.--..- -...++..+++.|++
T Consensus 751 ~~y~L--p~d~vvf~~FNqLy--KidP~~l~~W~~ILk~VPnS~LwllrfPa~-----------ge~rf~ty~~~~Gl~p 815 (966)
T KOG4626|consen 751 SQYGL--PEDAVVFCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEQRFRTYAEQLGLEP 815 (966)
T ss_pred CCCCC--CCCeEEEeechhhh--cCCHHHHHHHHHHHHhCCcceeEEEecccc-----------chHHHHHHHHHhCCCc
Confidence 44676 45555554444443 333567777777777778877777643222 125788899999994
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCccc-----ccccCCcEEEECC
Q 003552 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE-----IIEHGASGFHIDP 715 (811)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~E-----iI~dg~~G~li~p 715 (811)
++|.|... ...+|=.+-.. -+||.+-+..+-| -.|-+|.+-+|+|+|.-.....+. ....-+.|-++ .
T Consensus 816 ~riifs~v----a~k~eHvrr~~-LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli-a 888 (966)
T KOG4626|consen 816 DRIIFSPV----AAKEEHVRRGQ-LADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI-A 888 (966)
T ss_pred cceeeccc----cchHHHHHhhh-hhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-h
Confidence 67888763 22233334344 3788887766555 345678899999999753221111 11111233344 2
Q ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHhhhhHHhhHHHHHH
Q 003552 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY--ERYTWKIYSERLMTLAGVYGFWKYVSKLERRE 783 (811)
Q Consensus 716 ~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~--e~yswe~~a~~ll~Ly~~~~f~~~~~~~~~~~ 783 (811)
.+-++..+.-. .+..|.+..+++...-+..-. --|+-..++..++++|.. -|+...+-+.-.
T Consensus 889 k~~eEY~~iaV----~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~--MW~~y~~G~~p~ 952 (966)
T KOG4626|consen 889 KNREEYVQIAV----RLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQ--MWKKYCSGEVPD 952 (966)
T ss_pred hhHHHHHHHHH----HhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHH--HHHHhccCCCCc
Confidence 35666655543 345788888877665544322 238899999999999864 588877655444
No 191
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=73.83 E-value=20 Score=39.87 Aligned_cols=99 Identities=19% Similarity=0.141 Sum_probs=68.3
Q ss_pred CCCEEEEEe-ccCccCCHH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003552 571 SKPIVFSMA-RLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (811)
Q Consensus 571 ~k~iIl~vG-RL~~~Kgi~--~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (811)
.+.+++..| .-...|+.+ ...+.+..+.+.+ .++++.|+..+ .+...++.+.++ +.+.+.|
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e------------~e~~~~i~~~~~--~~~~l~~ 238 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDE------------EERAEEIAKGLP--NAVILAG 238 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHH------------HHHHHHHHHhcC--CccccCC
Confidence 345677777 555666654 6677777776654 78999998733 455555665553 2233666
Q ss_pred cccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 648 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
..+-.++...++. ||++|.+. + | .+-=|-|.|+|+|+-
T Consensus 239 ----k~sL~e~~~li~~-a~l~I~~D---S-g-~~HlAaA~~~P~I~i 276 (334)
T COG0859 239 ----KTSLEELAALIAG-ADLVIGND---S-G-PMHLAAALGTPTIAL 276 (334)
T ss_pred ----CCCHHHHHHHHhc-CCEEEccC---C-h-HHHHHHHcCCCEEEE
Confidence 7789999999996 99999873 2 2 245578899999996
No 192
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=73.31 E-value=7.5 Score=42.07 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=47.3
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCcccc-CC-CChhhHh--hhhhhhhhhhhh-hHHHHHHhhCCEEE
Q 003552 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTK-YP-DSDIYWK--KFDEKYHFSCQF-TADLIAMNNADFII 479 (811)
Q Consensus 406 ~~PDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k-~~-~s~~~~~--~~~~~y~f~~~~-~~e~~a~~~AD~II 479 (811)
.+.||+|+.... .+++|++++.+.|+|+++|=|+...-. +. -....|- .-.-+-.+...| ..-+.++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 467999987654 489999999999999999999962110 00 0000111 000000011111 23456899999999
Q ss_pred ecCHH
Q 003552 480 TSTYQ 484 (811)
Q Consensus 480 t~S~~ 484 (811)
+.+..
T Consensus 251 ~l~~~ 255 (268)
T PF11997_consen 251 PLYEY 255 (268)
T ss_pred ccchh
Confidence 98864
No 193
>PLN02207 UDP-glycosyltransferase
Probab=72.90 E-value=1.1e+02 Score=35.98 Aligned_cols=133 Identities=9% Similarity=0.063 Sum_probs=71.8
Q ss_pred CCCEEEEEeccCc--cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCC-CCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003552 571 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDV-NKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (811)
Q Consensus 571 ~k~iIl~vGRL~~--~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~-~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (811)
+..+.++.|.... .+-+..++.++..+. .+++++=..+.. ....-+ ....++ ..+++...+
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~-----~~flW~~r~~~~~~~~~lp---------~~f~er--~~~~g~i~~ 338 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQ-----YRFLWSLRTEEVTNDDLLP---------EGFLDR--VSGRGMICG 338 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCC-----CcEEEEEeCCCccccccCC---------HHHHhh--cCCCeEEEE
Confidence 4567888887653 334555666666542 245554332110 000000 111122 234455555
Q ss_pred cccCcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCccccccc-CCcEEEEC--------
Q 003552 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID-------- 714 (811)
Q Consensus 648 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI~d-g~~G~li~-------- 714 (811)
+++..++... . +.+.||.- -| -++++||+.+|+|+++- +...+...+.+ -+.|+-+.
T Consensus 339 ----W~PQ~~IL~H-~-~vg~FvTH---~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 339 ----WSPQVEILAH-K-AVGGFVSH---CG-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred ----eCCHHHHhcc-c-ccceeeec---Cc-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 6777777653 1 24456643 12 34789999999999996 34445554433 44565331
Q ss_pred -CCCHHHHHHHHHHHH
Q 003552 715 -PYHPDQAAELMADFF 729 (811)
Q Consensus 715 -p~D~e~lA~aI~~~l 729 (811)
.-+.++++++|.+++
T Consensus 409 ~~v~~e~i~~av~~vm 424 (468)
T PLN02207 409 EIVNANEIETAIRCVM 424 (468)
T ss_pred CcccHHHHHHHHHHHH
Confidence 126688888888776
No 194
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=72.48 E-value=11 Score=43.98 Aligned_cols=100 Identities=11% Similarity=-0.041 Sum_probs=64.2
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHhhhhcc
Q 003552 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (811)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~~~lp~ly~v~~Gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~ 549 (811)
-....+|.++++|+..+...+.++ ..++ ..++.++++++|.+.+.+........
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~------------------~~L~--~~d~~~~y~ei~~s~~~~~~~~~~~~------ 258 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATF------------------VSLS--NSDITSTYPEIDGSWFTYGQYESHLE------ 258 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhh------------------hhcC--CCCcceeeccccchhccccccccchh------
Confidence 356678999999987655222211 1223 34488999999988877622111100
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeccCccCCHHHHHHHHHHhhccCCC
Q 003552 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL 603 (811)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~ 603 (811)
-.+..+...|+ ...+..+..+-|+.|.||++.+++++.++....++
T Consensus 259 ------~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~ 304 (495)
T KOG0853|consen 259 ------LRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPE 304 (495)
T ss_pred ------cccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccCC
Confidence 11222333454 44577899999999999999999999988765443
No 195
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=72.47 E-value=35 Score=36.95 Aligned_cols=152 Identities=16% Similarity=0.136 Sum_probs=85.2
Q ss_pred CCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003552 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (811)
Q Consensus 572 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (811)
.+.++.++.=.+.|+++.++++.++... .+++-..|.|.. . .-.+..+.++.|+. +.++++..
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~----------~-hl~~~~l~~~~G~~--~~~Vpy~G- 140 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS----------D-HLAAALLAKAAGIK--FTHVPYDG- 140 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH----------H-HHHHHHHHHHHT-----EEEE-SS-
T ss_pred cceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch----------H-HHHHHHHHHHhCCc--eEEEEeCC-
Confidence 3567777776789999999999987643 344433333322 0 12334556677774 44554322
Q ss_pred cCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCC--CEEEc---CCC-----------CcccccccCCcEEEECC
Q 003552 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL--PTFAT---CHG-----------GPAEIIEHGASGFHIDP 715 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl--PVIAT---~~G-----------G~~EiI~dg~~G~li~p 715 (811)
..+.+..++....|+.+.. .-........|. |+.++ +.. |..++....-.|+.+++
T Consensus 141 --~~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~ 212 (274)
T PF03401_consen 141 --GAEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPK 212 (274)
T ss_dssp --HHHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEET
T ss_pred --ccHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCC
Confidence 2455666666666765543 112333444443 11111 111 22233333446889999
Q ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 003552 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (811)
Q Consensus 716 ~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 748 (811)
+-+++..+.+.+++++..+||+..+.+.+.+..
T Consensus 213 gtp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~~ 245 (274)
T PF03401_consen 213 GTPDEIVDKLADAIKKALEDPEFQEFLEKMGLE 245 (274)
T ss_dssp TS-HHHHHHHHHHHHHHHT-HHHHHHHHHHTEE
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHCCCc
Confidence 999999999999999999999987777665543
No 196
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=71.23 E-value=17 Score=36.58 Aligned_cols=64 Identities=22% Similarity=0.140 Sum_probs=43.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHc------CCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEE
Q 003552 405 QGFPDFIIGNYSDGNLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFI 478 (811)
Q Consensus 405 ~~~PDlIh~h~~~~~lva~lla~~l------gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~I 478 (811)
+.+||+|++|.+..+....++++.+ |.++|++= +....+-+ + ..-++.+.-||.+
T Consensus 90 r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIE-S~aRv~~l---------------S---lTGklly~~aD~f 150 (170)
T PF08660_consen 90 RERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIE-SFARVKTL---------------S---LTGKLLYPFADRF 150 (170)
T ss_pred HhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEE-eeeecCCC---------------c---hHHHHHHHhCCEE
Confidence 3489999999999888888888888 88887642 11111100 0 1133566679999
Q ss_pred EecCHHHHh
Q 003552 479 ITSTYQEIA 487 (811)
Q Consensus 479 It~S~~~~~ 487 (811)
++--++..+
T Consensus 151 ~VQW~~l~~ 159 (170)
T PF08660_consen 151 IVQWEELAE 159 (170)
T ss_pred EEcCHHHHh
Confidence 998877654
No 197
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=70.33 E-value=1e+02 Score=35.73 Aligned_cols=140 Identities=14% Similarity=0.146 Sum_probs=75.5
Q ss_pred CCEEEEEeccCc-----cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC--CCCcEE
Q 003552 572 KPIVFSMARLDH-----VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK--LDGQFR 644 (811)
Q Consensus 572 k~iIl~vGRL~~-----~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~--L~~~V~ 644 (811)
..++++.|.... .+-...++.+++++ +++.|+++=..... .. +.+... ..++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~------------~~---~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS------------IY---FPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc------------hh---hhhcCCCCCcCceE
Confidence 567777788763 34445566666654 46677776655430 00 222221 135688
Q ss_pred EeccccCcCChHHHHHHHHcc-ccEEEecCCCCCCCHHHHHHHHcCCCEEEc----CCCCcccccccCCcEEEECCCCH-
Q 003552 645 WIAAQTNRARNGELYRYIADT-KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDPYHP- 718 (811)
Q Consensus 645 flG~~~~~v~~~el~~~ia~a-advfV~PS~~E~fGltvlEAMa~GlPVIAT----~~GG~~EiI~dg~~G~li~p~D~- 718 (811)
..+ +++..++. +++. .++||.= -|++ +++||..+|+|+++. +..-++..+.+...|...+..|.
T Consensus 339 ~~~----W~PQ~~ll--l~H~~v~~FvTH---gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~ 408 (496)
T KOG1192|consen 339 LSK----WAPQNDLL--LDHPAVGGFVTH---GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLV 408 (496)
T ss_pred Eec----CCCcHHHh--cCCCcCcEEEEC---Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcC
Confidence 777 66776765 3221 3445532 3444 459999999999964 34445555544333444433322
Q ss_pred -HHHHHHHHHHHHhhcCCHHHHHHHHH
Q 003552 719 -DQAAELMADFFGKCKENPSHWKKISD 744 (811)
Q Consensus 719 -e~lA~aI~~~l~~l~~dp~~~~~ms~ 744 (811)
..+.+++..++ .++++.+...+
T Consensus 409 ~~~~~~~~~~il----~~~~y~~~~~~ 431 (496)
T KOG1192|consen 409 SEELLEAIKEIL----ENEEYKEAAKR 431 (496)
T ss_pred cHHHHHHHHHHH----cChHHHHHHHH
Confidence 12555564443 67776554433
No 198
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=70.07 E-value=1.1e+02 Score=32.17 Aligned_cols=126 Identities=9% Similarity=-0.014 Sum_probs=66.9
Q ss_pred CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCCCCCCCH-H
Q 003552 603 LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGL-T 681 (811)
Q Consensus 603 ~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl-t 681 (811)
.+++.||..... +++..+++ .++|.|... ....++ +.. +++++..+--+...- .
T Consensus 48 gA~VtVVap~i~-------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~LViaATdD~~vN~~I 102 (223)
T PRK05562 48 GCYVYILSKKFS-------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KHLIVIATDDEKLNNKI 102 (223)
T ss_pred CCEEEEEcCCCC-------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-CcEEEECCCCHHHHHHH
Confidence 577777776544 23444433 356888751 222233 333 554444433333333 3
Q ss_pred HHHHHHcCCCEEEcCCCCccccc-----ccCCcEEEE-CCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 003552 682 VVEAMTCGLPTFATCHGGPAEII-----EHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (811)
Q Consensus 682 vlEAMa~GlPVIAT~~GG~~EiI-----~dg~~G~li-~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~ 753 (811)
.-+|.+.|.+|.+.+.....+++ ..|.--+-+ .-+..-.+|..|.+-++.++.+-+.+-++....|+.+.+.
T Consensus 103 ~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~~l~~~R~~vk~~ 180 (223)
T PRK05562 103 RKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIEYVTKIRNKAKKN 180 (223)
T ss_pred HHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45666779999887665544443 333222222 2233446667777766666644455556666667766553
No 199
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=69.30 E-value=33 Score=37.66 Aligned_cols=97 Identities=14% Similarity=0.043 Sum_probs=60.6
Q ss_pred CEEEEEeccCccCC--HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003552 573 PIVFSMARLDHVKN--MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (811)
Q Consensus 573 ~iIl~vGRL~~~Kg--i~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (811)
.+++..|.-.+.|. .+...+.+..+.+ .+.++++.||++. +.+..+++.+. ...+.+.|
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~--~~~~ivl~~G~~~-----------e~~~~~~i~~~---~~~~~l~g--- 240 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAP--SGLRIKLPWGAEH-----------EEQRAKRLAEG---FPYVEVLP--- 240 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHH--CCCeEEEeCCCHH-----------HHHHHHHHHcc---CCcceecC---
Confidence 34344454334444 3466777777654 2567777655543 12333334332 23466777
Q ss_pred CcCChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc
Q 003552 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (811)
Q Consensus 651 ~~v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT 695 (811)
..+-.++...++. +|++|... + -.+-=|-|+|+|+|+-
T Consensus 241 -~~sL~elaali~~-a~l~I~nD---S--Gp~HlA~A~g~p~val 278 (322)
T PRK10964 241 -KLSLEQVARVLAG-AKAVVSVD---T--GLSHLTAALDRPNITL 278 (322)
T ss_pred -CCCHHHHHHHHHh-CCEEEecC---C--cHHHHHHHhCCCEEEE
Confidence 6788999999996 99999763 2 2356688999999995
No 200
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=68.63 E-value=11 Score=40.52 Aligned_cols=69 Identities=10% Similarity=0.128 Sum_probs=46.6
Q ss_pred hHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCC-CEEEcC--CCCcccccccCCcEEEECCCCHHHHHHH
Q 003552 655 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFATC--HGGPAEIIEHGASGFHIDPYHPDQAAEL 724 (811)
Q Consensus 655 ~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl-PVIAT~--~GG~~EiI~dg~~G~li~p~D~e~lA~a 724 (811)
..+..+.|++ +..+++|.-...+..-++|||++|| |||.++ .-...+++.=..-.+.++..+..++.+.
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~i 298 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEI 298 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHH
Confidence 3456666775 8888888777678889999999998 888764 2234556643455667776555544433
No 201
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=66.57 E-value=18 Score=44.23 Aligned_cols=43 Identities=35% Similarity=0.540 Sum_probs=28.9
Q ss_pred CCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEecc
Q 003552 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (811)
Q Consensus 275 ~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~ 340 (811)
.|..+||++||||-- .+++| .|| ...+|.++||+|. |+++|..
T Consensus 366 ~~~~~rvLv~spHPD---Devi~---~GG---------------Tlarl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 366 LPYPKRVIIFSPHPD---DDVIS---MGG---------------TFRRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred ccCCceEEEEEeCCC---chHhh---hHH---------------HHHHHHHCCCcEE--EEEecCC
Confidence 466799999999952 33443 354 3346889999999 4445544
No 202
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=63.96 E-value=1.1e+02 Score=33.02 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=27.5
Q ss_pred CCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccC
Q 003552 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 341 (811)
Q Consensus 276 pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~ 341 (811)
.|.|||++....|+..+ | +. .|++.|++.| +|. |+++..
T Consensus 3 ~~~M~ILltNDDGi~a~----------G----i~--------aL~~~l~~~g-~V~----VvAP~~ 41 (257)
T PRK13932 3 DKKPHILVCNDDGIEGE----------G----IH--------VLAASMKKIG-RVT----VVAPAE 41 (257)
T ss_pred CCCCEEEEECCCCCCCH----------H----HH--------HHHHHHHhCC-CEE----EEcCCC
Confidence 35689999999998432 2 33 4566777778 788 887664
No 203
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=62.54 E-value=28 Score=39.92 Aligned_cols=81 Identities=10% Similarity=-0.024 Sum_probs=54.0
Q ss_pred HHcCCCEEEcCCC---CcccccccCCcEEEECC-CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003552 686 MTCGLPTFATCHG---GPAEIIEHGASGFHIDP-YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 761 (811)
Q Consensus 686 Ma~GlPVIAT~~G---G~~EiI~dg~~G~li~p-~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~ 761 (811)
|+||-.|+..... -..+.+..+++=+-|.. +|..++.++| +.+.+|++..++|+++|.+.+.+..+.+.+..
T Consensus 234 L~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v----~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~ 309 (395)
T PF05686_consen 234 LACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKV----EWLNAHDDEAQRIAENGQRFAREYLTMEDVYC 309 (395)
T ss_pred HcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHh----hhcccChHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 5555555543211 11222334444444544 3667777777 77789999999999999999988888888777
Q ss_pred HHHHHHHHh
Q 003552 762 RLMTLAGVY 770 (811)
Q Consensus 762 ~ll~Ly~~~ 770 (811)
-+..+...|
T Consensus 310 Y~~~LL~eY 318 (395)
T PF05686_consen 310 YWRRLLLEY 318 (395)
T ss_pred HHHHHHHHH
Confidence 777766655
No 204
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=60.81 E-value=6.1 Score=37.30 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=20.9
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEecc
Q 003552 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (811)
Q Consensus 301 ~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~ 340 (811)
++|-..-.+ .|+++|+++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 466666666 68889999999999 88765
No 205
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=58.04 E-value=1.6e+02 Score=31.57 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=23.2
Q ss_pred CCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEecC
Q 003552 405 QGFPDFIIG--NY---------SDGNLVASLLAYKMGITQCTIAHA 439 (811)
Q Consensus 405 ~~~PDlIh~--h~---------~~~~lva~lla~~lgvp~v~t~H~ 439 (811)
..+||+|++ |. ..|...|++-+...|+|-+..-..
T Consensus 84 ~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 84 PEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred cCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 568999983 21 113456677777889998766553
No 206
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=56.98 E-value=49 Score=35.56 Aligned_cols=47 Identities=15% Similarity=0.156 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003552 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (811)
Q Consensus 720 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~ 770 (811)
++.++| +.+.++++..++|+++|++.+.+..+.+.+..-+..+...|
T Consensus 203 ~l~~~i----~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~~~ll~ey 249 (256)
T smart00672 203 ELKEAV----DWGNEHDKKAQEIGKRGSEFIQQNLSMEDVYDYMFHLLQEY 249 (256)
T ss_pred hHHHHH----HHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 477777 56668999999999999999998899998888888877766
No 207
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=53.42 E-value=87 Score=36.70 Aligned_cols=96 Identities=8% Similarity=0.106 Sum_probs=58.4
Q ss_pred HHHHHHHccccEEEecCCCCCCCHHHHHHHHcCC-CEEEcCC--CCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhc
Q 003552 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFATCH--GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 733 (811)
Q Consensus 657 el~~~ia~aadvfV~PS~~E~fGltvlEAMa~Gl-PVIAT~~--GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~ 733 (811)
...+.+++ +-.+++|+-.+...-.++||+.+|| |||.++. ....+.+.-..-++.++ .+++-+.|.+.|...
T Consensus 336 ~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~i- 410 (464)
T KOG1021|consen 336 NYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLSI- 410 (464)
T ss_pred hHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHhc-
Confidence 45566775 8889999999988889999999998 9999864 23344444344455554 344433344444221
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCHHH
Q 003552 734 ENPSHWKKISDGGLKRIYERYTWKI 758 (811)
Q Consensus 734 ~dp~~~~~ms~~a~~~v~e~yswe~ 758 (811)
-.+...+|.++-...+..++.|..
T Consensus 411 -~~~~~~~m~~~v~~~v~r~~~~~~ 434 (464)
T KOG1021|consen 411 -PEEEVLRMRENVIRLVPRHFLKKP 434 (464)
T ss_pred -CHHHHHHHHHHHHHHHHhhEEeCC
Confidence 223334455554444555555553
No 208
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=53.07 E-value=40 Score=36.27 Aligned_cols=34 Identities=21% Similarity=0.003 Sum_probs=23.2
Q ss_pred ccEEEecCCCC--CCCHHHHHHHHcCCCEEEcCCCC
Q 003552 666 KGAFVQPAFYE--AFGLTVVEAMTCGLPTFATCHGG 699 (811)
Q Consensus 666 advfV~PS~~E--~fGltvlEAMa~GlPVIAT~~GG 699 (811)
.|++|.=--.+ ++--++--|+.+|+|||.-+-+-
T Consensus 198 i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~ 233 (256)
T TIGR00715 198 IDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQ 233 (256)
T ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCC
Confidence 55655443322 45557888999999999976664
No 209
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=52.77 E-value=61 Score=33.72 Aligned_cols=113 Identities=18% Similarity=0.125 Sum_probs=64.7
Q ss_pred CccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEeccccCcCChHHHHH
Q 003552 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAAQTNRARNGELYR 660 (811)
Q Consensus 582 ~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~-~V~flG~~~~~v~~~el~~ 660 (811)
+-.|=...|..|+.-+... ..-++++||..+. ....+++.+++.|..- .=+|+|- -..+..+..
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~-----------~~~~v~k~A~~~g~~~v~~RWlgG---~LTN~~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY-----------GQKPVQKFAEVVGAKAITGRFIPG---TLTNPSLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-----------HHHHHHHHHHHhCCeeecCccCCC---cCcCcchhc
Confidence 4455556666676665554 3457888888764 2344555666554421 1168872 223333333
Q ss_pred HHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc-CCCCcccccccCCcEEEECCCC
Q 003552 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 717 (811)
Q Consensus 661 ~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT-~~GG~~EiI~dg~~G~li~p~D 717 (811)
++- =|+.+..... .=..++.||.-+|.||||- |.....+.| -+.++.+|
T Consensus 112 ~~~--Pdliiv~dp~-~~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Nd 161 (204)
T PRK04020 112 YIE--PDVVVVTDPR-GDAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNN 161 (204)
T ss_pred cCC--CCEEEEECCc-ccHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCC
Confidence 322 3443333221 1267899999999999994 666666665 35676555
No 210
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=51.95 E-value=58 Score=33.20 Aligned_cols=68 Identities=16% Similarity=0.028 Sum_probs=27.2
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhhhhhhhhhhhHHHHHHhhCCEEEecCHHHH
Q 003552 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (811)
Q Consensus 407 ~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (811)
+||+++.-......-....+++.|+|++..-=-+... +. ..|.+... .-+..++.-|.|.+.|....
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~----s~-------~~~~~~~~--~~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSER----SF-------RRYRRFPF--LFRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-------------------------H--HHHHHGGG-SEEEESSHHHH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccc----cc-------hhhhhhHH--HHHHHHHhCCEEEECCHHHH
Confidence 7998886655532222345577899987654322110 11 11111111 12347889999999998876
Q ss_pred h
Q 003552 487 A 487 (811)
Q Consensus 487 ~ 487 (811)
+
T Consensus 162 ~ 162 (186)
T PF04413_consen 162 E 162 (186)
T ss_dssp H
T ss_pred H
Confidence 5
No 211
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=51.74 E-value=2e+02 Score=29.10 Aligned_cols=44 Identities=16% Similarity=0.421 Sum_probs=30.3
Q ss_pred CCCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccC
Q 003552 274 RLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 341 (811)
Q Consensus 274 ~~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~ 341 (811)
+++|.|||.+-.+-| + |-.+.++ .+++.|.+.|+.|- =++|...
T Consensus 1 ~~~~~mki~ITG~PG------------v-GKtTl~~--------ki~e~L~~~g~kvg---Gf~t~EV 44 (179)
T COG1618 1 MIKMAMKIFITGRPG------------V-GKTTLVL--------KIAEKLREKGYKVG---GFITPEV 44 (179)
T ss_pred CCCcceEEEEeCCCC------------c-cHHHHHH--------HHHHHHHhcCceee---eEEeeee
Confidence 367889998853322 2 5566666 88999999999987 3555443
No 212
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=51.59 E-value=3.6e+02 Score=31.03 Aligned_cols=199 Identities=13% Similarity=0.127 Sum_probs=116.9
Q ss_pred EEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeC-cCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec-cccCc
Q 003552 575 VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAG-YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA-AQTNR 652 (811)
Q Consensus 575 Il~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~-g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG-~~~~~ 652 (811)
|=|.|+.+..+-+..+.+...+.++ +++.+|||-. |.. ..+.+..++|.+..+..+ +++|.|.= ... -
T Consensus 157 iP~ygsyte~dpv~ia~egv~~fKk--e~fdvIIvDTSGRh------~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasi-G 226 (483)
T KOG0780|consen 157 VPFYGSYTEADPVKIASEGVDRFKK--ENFDVIIVDTSGRH------KQEASLFEEMKQVSKAIK-PDEIIFVMDASI-G 226 (483)
T ss_pred CeeEecccccchHHHHHHHHHHHHh--cCCcEEEEeCCCch------hhhHHHHHHHHHHHhhcC-CCeEEEEEeccc-c
Confidence 4566677888888899999999877 5788888854 333 345566777877777766 56777753 111 1
Q ss_pred CChHHHHHHHHccccE--EEecCC----CCCCCHHHHHHHHcCCCEEEcCCCCcccccccCC----cEEEECCCCHHHHH
Q 003552 653 ARNGELYRYIADTKGA--FVQPAF----YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA----SGFHIDPYHPDQAA 722 (811)
Q Consensus 653 v~~~el~~~ia~aadv--fV~PS~----~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~----~G~li~p~D~e~lA 722 (811)
....+..+.+..+.|+ .+.+-. ..|..++.++| .++||+--.+|-.-|-++.-. .+-+.--+|.+++.
T Consensus 227 Qaae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaVaa--TksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glv 304 (483)
T KOG0780|consen 227 QAAEAQARAFKETVDVGAVILTKLDGHAKGGGALSAVAA--TKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLV 304 (483)
T ss_pred HhHHHHHHHHHHhhccceEEEEecccCCCCCceeeehhh--hCCCEEEEecCccccccCCCChHHHHHHHhccccHHHHH
Confidence 2334444455545554 344432 23445566654 688998877775444333211 11122346888888
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH---------h-hhhHHhhHHHHH----HHhhHH
Q 003552 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV---------Y-GFWKYVSKLERR----ETRRYL 788 (811)
Q Consensus 723 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~---------~-~f~~~~~~~~~~----~~~~y~ 788 (811)
+++.++- ..+++++.+++. .-+||...+.+++..+.+. + ||- .+++-+-+ .++||+
T Consensus 305 ek~~ev~--~~d~~el~~kl~-------~gkFtlrd~y~Qfq~imkmGp~s~v~~MiPG~s-~m~~~~e~Es~~~~krm~ 374 (483)
T KOG0780|consen 305 EKVQEVG--KDDAKELVEKLK-------QGKFTLRDFYDQFQNIMKMGPLSQVLGMIPGMS-MMSKGNEEESSAKLKRMM 374 (483)
T ss_pred HHHHHHh--hhhHHHHHHHHH-------hCCccHHHHHHHHHHHHhhCCHHHHHhhCCCcc-cCCCcchhHHHHHHHHHH
Confidence 8886653 123344443332 3579999988888776654 2 443 44443322 466777
Q ss_pred HHHHhhc
Q 003552 789 EMFYILK 795 (811)
Q Consensus 789 ~~~~~~~ 795 (811)
-|+=.+-
T Consensus 375 ~mmDsMt 381 (483)
T KOG0780|consen 375 TMMDSMT 381 (483)
T ss_pred HHHHhcC
Confidence 6665443
No 213
>COG1647 Esterase/lipase [General function prediction only]
Probab=49.99 E-value=59 Score=34.36 Aligned_cols=43 Identities=21% Similarity=0.257 Sum_probs=28.9
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003552 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 394 ~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H 438 (811)
.+..+.+.. .+-..|..+--+.|+.++..+|..+.++-++.+-
T Consensus 73 ~d~Y~~L~~--~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~ 115 (243)
T COG1647 73 EDGYRDLKE--AGYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMC 115 (243)
T ss_pred HHHHHHHHH--cCCCeEEEEeecchhHHHHHHHhhCCccceeeec
Confidence 344444443 3445577788889999999999988766554443
No 214
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=47.82 E-value=3.4e+02 Score=28.08 Aligned_cols=136 Identities=11% Similarity=0.047 Sum_probs=69.0
Q ss_pred HHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEe
Q 003552 592 ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ 671 (811)
Q Consensus 592 eA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~ 671 (811)
..+..+.+. .++.+++..... +.+.+++++ ++|.|+.. .... ..+.+ +++++.
T Consensus 23 rk~~~Ll~~--ga~VtVvsp~~~-------------~~l~~l~~~----~~i~~~~~---~~~~----~dl~~-~~lVi~ 75 (205)
T TIGR01470 23 RKARLLLKA--GAQLRVIAEELE-------------SELTLLAEQ----GGITWLAR---CFDA----DILEG-AFLVIA 75 (205)
T ss_pred HHHHHHHHC--CCEEEEEcCCCC-------------HHHHHHHHc----CCEEEEeC---CCCH----HHhCC-cEEEEE
Confidence 333444443 466777765433 334444433 36888751 1122 23443 666544
Q ss_pred cC-CCCCCCHHHHHHHHcCCCEEEcCCCCcccc-----cccCCcEEEE-CCCCHHHHHHHHHHHHHhhcC-CHHHHHHHH
Q 003552 672 PA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEI-----IEHGASGFHI-DPYHPDQAAELMADFFGKCKE-NPSHWKKIS 743 (811)
Q Consensus 672 PS-~~E~fGltvlEAMa~GlPVIAT~~GG~~Ei-----I~dg~~G~li-~p~D~e~lA~aI~~~l~~l~~-dp~~~~~ms 743 (811)
.+ ..|----..-+|-..|+||-+.+.....++ +..|.--+-+ .-+..-.++..|.+-++.++. +-+.+-++.
T Consensus 76 at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~~~~~ 155 (205)
T TIGR01470 76 ATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLPPSLGDLATLA 155 (205)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 43 222333346677788999977765554443 3344322222 223345666777666666553 223344555
Q ss_pred HHHHHHHHHhC
Q 003552 744 DGGLKRIYERY 754 (811)
Q Consensus 744 ~~a~~~v~e~y 754 (811)
...|..+.+..
T Consensus 156 ~~~R~~~k~~~ 166 (205)
T TIGR01470 156 ATWRDAVKKRL 166 (205)
T ss_pred HHHHHHHHhhC
Confidence 55666664443
No 215
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=47.61 E-value=1.7e+02 Score=34.90 Aligned_cols=158 Identities=13% Similarity=0.112 Sum_probs=98.2
Q ss_pred CCCCEEEEEeccCc-cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003552 570 RSKPIVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (811)
Q Consensus 570 ~~k~iIl~vGRL~~-~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (811)
..++..+..|.-.. .||-+..++.+.+.. +++-.|.+.... ...+++-|.=.|
T Consensus 275 kr~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~~---------------------~~~~P~~V~NHG- 328 (559)
T PF15024_consen 275 KRKNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQR---------------------PPNVPSFVKNHG- 328 (559)
T ss_pred cccceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCCC---------------------CcccchhhhhcC-
Confidence 34455666666544 667777777776542 345455443321 112333344455
Q ss_pred ccCcCChHHHHHHHHccccEEEecC-CCCCCCHHHHHHHHcCCCEEEcCCCCcccc-----cc-----------------
Q 003552 649 QTNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEI-----IE----------------- 705 (811)
Q Consensus 649 ~~~~v~~~el~~~ia~aadvfV~PS-~~E~fGltvlEAMa~GlPVIAT~~GG~~Ei-----I~----------------- 705 (811)
..+..++...+.. +-+||--- -+| |-+.+||+|.|+|.|-.....+..- ..
T Consensus 329 ---~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~ 402 (559)
T PF15024_consen 329 ---ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEE 402 (559)
T ss_pred ---cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHh
Confidence 6677899999996 88998542 245 5578999999999888754433211 10
Q ss_pred --cCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhh
Q 003552 706 --HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGF 772 (811)
Q Consensus 706 --dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~~f 772 (811)
..-.-+.|+-+|.+++-++|.+++. .+- --++--.||-+.+.+++-.+.+.-.|
T Consensus 403 ~iG~PhVytVd~~n~~~v~~Avk~il~----~~v---------~Py~P~efT~egmLeRv~~~ie~q~f 458 (559)
T PF15024_consen 403 FIGEPHVYTVDINNSTEVEAAVKAILA----TPV---------EPYLPYEFTCEGMLERVNALIEKQDF 458 (559)
T ss_pred hCCCCeEEEEcCCCHHHHHHHHHHHHh----cCC---------CCcCCcccCHHHHHHHHHHHHHhhhh
Confidence 0113577899999999999977763 221 12344568888898888777665443
No 216
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=47.12 E-value=20 Score=36.77 Aligned_cols=33 Identities=18% Similarity=0.457 Sum_probs=26.9
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEecc
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~ 340 (811)
|||+||+..|.-| ++++++..++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~G-------------------------s~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKAG-------------------------SRILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchhH-------------------------HHHHHHHHhCCCeeE----EEEeC
Confidence 7999999888733 167778899999999 88776
No 217
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=46.76 E-value=1.5e+02 Score=30.40 Aligned_cols=30 Identities=33% Similarity=0.505 Sum_probs=23.4
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003552 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (811)
Q Consensus 410 lIh~h~~~~~lva~lla~~lgvp~v~t~H~l 440 (811)
+++++ +.|++.|..++.++++|.|.+.=++
T Consensus 62 ~liGS-SlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 62 VLIGS-SLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred EEEEE-ChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 55555 7788999999999999998775443
No 218
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=46.74 E-value=84 Score=33.04 Aligned_cols=49 Identities=24% Similarity=0.302 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCceEEE---EcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003552 388 YLETFTEDVGSEITAELQGFPDFII---GNYSDG-NLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 388 ~l~~f~~~~~~~i~~~~~~~PDlIh---~h~~~~-~lva~lla~~lgvp~v~t~H 438 (811)
|.+.+...+.+.+-..++. -+|+ .||..+ -.-.+..++.+.+|+|++.-
T Consensus 56 yres~~ks~~rlldSalkn--~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALKN--YLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhcc--eEEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 5566777777766555432 2444 344444 23345667888999987654
No 219
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=46.31 E-value=3.4e+02 Score=27.71 Aligned_cols=95 Identities=14% Similarity=0.083 Sum_probs=54.1
Q ss_pred cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHH
Q 003552 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIA 663 (811)
Q Consensus 584 ~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia 663 (811)
..-.+.+.+.+..+.+....+.++.+...... +. ...............++..+.. ..+..++...++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 256 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDD------ED---DDDFNEIDIKAEKFFNVIIIDY---SLSPDELLELIS 256 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccch------hh---HHHHHhhhhhcccccceeEecC---CCCHHHHHHHHh
Confidence 34455666677766664444555555544331 00 1111111110222334444432 567889999999
Q ss_pred ccccEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 003552 664 DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (811)
Q Consensus 664 ~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~ 696 (811)
. ++++|..... ..+=|+++|+|+|+-.
T Consensus 257 ~-~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 257 Q-ADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred c-CCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 5 9999976543 4788999999999854
No 220
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=45.08 E-value=3.5e+02 Score=29.13 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=22.6
Q ss_pred CCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEec
Q 003552 405 QGFPDFIIG--NY---------SDGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 405 ~~~PDlIh~--h~---------~~~~lva~lla~~lgvp~v~t~H 438 (811)
..+||+|++ |. ..|...|++-+...|+|-+..-.
T Consensus 85 ~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 85 PDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred CCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 568999984 11 11345667777889999776544
No 221
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=42.64 E-value=73 Score=32.98 Aligned_cols=112 Identities=17% Similarity=0.095 Sum_probs=62.6
Q ss_pred CccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEecc-ccCcCChHHHH
Q 003552 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAA-QTNRARNGELY 659 (811)
Q Consensus 582 ~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~-~V~flG~-~~~~v~~~el~ 659 (811)
+-.|=...|.+|+.-+.+.- .-++++||..+. ....+++.++..|..- .=+|+|- .+|+.. .
T Consensus 41 dL~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~-----------~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~~----~ 104 (196)
T TIGR01012 41 DLRKTDERLRVAAKFLVRIE-PEDILVVSARIY-----------GQKPVLKFAKVTGARAIAGRFTPGTFTNPMQ----K 104 (196)
T ss_pred cHHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH-----------HHHHHHHHHHHhCCceECCeeCCCCCCCccc----c
Confidence 33455556666665554433 458899998765 1334555565554421 2278873 233221 1
Q ss_pred HHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc-CCCCcccccccCCcEEEECCCC
Q 003552 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 717 (811)
Q Consensus 660 ~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT-~~GG~~EiI~dg~~G~li~p~D 717 (811)
. +. -=|+.+..... .=..++.||..+|.||||- +.....+.| -+.++.+|
T Consensus 105 ~-~~-~Pdlliv~dp~-~~~~Av~EA~~l~IP~Iai~DTn~dp~~v-----dypIP~Nd 155 (196)
T TIGR01012 105 A-FR-EPEVVVVTDPR-ADHQALKEASEVGIPIVALCDTDNPLRYV-----DLVIPTNN 155 (196)
T ss_pred c-cC-CCCEEEEECCc-cccHHHHHHHHcCCCEEEEeeCCCCCccC-----CEEECCCC
Confidence 1 11 13444443222 2256899999999999994 666666665 35565544
No 222
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=41.99 E-value=3.9e+02 Score=28.78 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=22.6
Q ss_pred CCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEec
Q 003552 405 QGFPDFIIG--NY---------SDGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 405 ~~~PDlIh~--h~---------~~~~lva~lla~~lgvp~v~t~H 438 (811)
..+||+|.+ |. ..|...|+.-+...|+|-+..-.
T Consensus 84 ~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 84 DKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred cCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 458999983 11 11345667777788999876554
No 223
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=41.20 E-value=3.8e+02 Score=26.85 Aligned_cols=108 Identities=19% Similarity=0.257 Sum_probs=52.9
Q ss_pred HHHHHHHHCCCceeeceeEEeccCCCCCCCccccceeeecCccCeEEEEecCccccccccccccccCchhhHHHHHHHHH
Q 003552 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 397 (811)
Q Consensus 318 ~L~~~L~~~GheV~~~ilVvT~~~p~~~~~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~ 397 (811)
..+++|..+|+.|. =++-...+...+..|.-.++.+.....+.|.- ..++. .+.=.+-| .-...+.
T Consensus 18 ~~a~~L~~~G~rv~---G~vQ~~~~~~~~~~~~m~l~dl~~G~~~~IsQ-~LG~g-------s~gCrLD~---~~La~A~ 83 (159)
T PF10649_consen 18 AFAARLRARGVRVA---GLVQRNTADGDGGRCDMDLRDLPSGRRIRISQ-DLGPG-------SRGCRLDP---GALAEAS 83 (159)
T ss_pred HHHHHHHhCCCeEE---EEeccccCCCCCCccceEEEECCCCCEEEEee-ccCCC-------CcccccCH---HHHHHHH
Confidence 67788999999987 12222223333344444444443322122211 11110 00111122 1122333
Q ss_pred HHHHHHcCCCceEEEEcCCC-----c-hHHH-HHHHHHcCCcEEEEecC
Q 003552 398 SEITAELQGFPDFIIGNYSD-----G-NLVA-SLLAYKMGITQCTIAHA 439 (811)
Q Consensus 398 ~~i~~~~~~~PDlIh~h~~~-----~-~lva-~lla~~lgvp~v~t~H~ 439 (811)
..+...+...||+++.|-+. + ++.. ...+-..|+|+++.+..
T Consensus 84 ~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 84 AALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 34444455689999988753 2 3332 23344579999998874
No 224
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=40.89 E-value=3.7e+02 Score=26.62 Aligned_cols=129 Identities=18% Similarity=0.217 Sum_probs=68.9
Q ss_pred EEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcc----ccEEEecCCCCCCCHH
Q 003552 606 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT----KGAFVQPAFYEAFGLT 681 (811)
Q Consensus 606 LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~a----advfV~PS~~E~fGlt 681 (811)
.+|.|+..| ....++.....+++|+.-.++..+. ....+++.+++... +++||.-+-.++ .|.
T Consensus 4 ~Ii~gs~SD---------~~~~~~a~~~L~~~gi~~~~~V~sa---HR~p~~l~~~~~~~~~~~~~viIa~AG~~a-~Lp 70 (150)
T PF00731_consen 4 AIIMGSTSD---------LPIAEEAAKTLEEFGIPYEVRVASA---HRTPERLLEFVKEYEARGADVIIAVAGMSA-ALP 70 (150)
T ss_dssp EEEESSGGG---------HHHHHHHHHHHHHTT-EEEEEE--T---TTSHHHHHHHHHHTTTTTESEEEEEEESS---HH
T ss_pred EEEeCCHHH---------HHHHHHHHHHHHHcCCCEEEEEEec---cCCHHHHHHHHHHhccCCCEEEEEECCCcc-cch
Confidence 456666655 4556777778888888777888874 33456777776532 468887765544 555
Q ss_pred HHHHHHcCCCEEEc--CCC---Cccc---ccc--cCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Q 003552 682 VVEAMTCGLPTFAT--CHG---GPAE---IIE--HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (811)
Q Consensus 682 vlEAMa~GlPVIAT--~~G---G~~E---iI~--dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~ 749 (811)
-+=|-..-+|||+- ..| |... +++ .|..--++..+++...|-...+++. ..|++.|+++...-.+.
T Consensus 71 gvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa--~~d~~l~~kl~~~~~~~ 146 (150)
T PF00731_consen 71 GVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILA--LKDPELREKLRAYREKM 146 (150)
T ss_dssp HHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHH--TT-HHHHHHHHHHHHHH
T ss_pred hhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHh--cCCHHHHHHHHHHHHHH
Confidence 55555668898884 222 2222 222 2222123333455555544445442 36899888876554443
No 225
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=39.09 E-value=6.1e+02 Score=28.57 Aligned_cols=125 Identities=8% Similarity=-0.048 Sum_probs=70.2
Q ss_pred CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHH----HHHHccccEEEecC--CC
Q 003552 602 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY----RYIADTKGAFVQPA--FY 675 (811)
Q Consensus 602 ~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~----~~ia~aadvfV~PS--~~ 675 (811)
.+.+++++|.|.- -+...+...+.|. .+|.+...+....+.++++ .+... +|+++..| ..
T Consensus 173 ~~k~vLvIGaGem------------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Ta 238 (338)
T PRK00676 173 KKASLLFIGYSEI------------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESA 238 (338)
T ss_pred cCCEEEEEcccHH------------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCC
Confidence 4679999999843 2333333444555 4688877554455666655 55664 89998753 33
Q ss_pred CCCCHHHHHHHHcCCCEEEcCCCCcccccc--cCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003552 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (811)
Q Consensus 676 E~fGltvlEAMa~GlPVIAT~~GG~~EiI~--dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 750 (811)
-+.|....|.+..-.+-+.-|..-|+++=. ...+-.++ |.|++.+-+.+ |-..|++....+...+
T Consensus 239 s~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~~-------n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 239 YAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQK-------HLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 344555556554322246667777777631 12223344 56666555532 4445555555555554
No 226
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=37.18 E-value=1.9e+02 Score=32.65 Aligned_cols=42 Identities=17% Similarity=0.114 Sum_probs=28.3
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003552 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (811)
Q Consensus 396 ~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (811)
++.++..+ +-.-+..+-.+.|+..|++.+.....|+....+-
T Consensus 165 Ll~Wl~~~--G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~l 206 (348)
T PF09752_consen 165 LLHWLERE--GYGPLGLTGISMGGHMAALAASNWPRPVALVPCL 206 (348)
T ss_pred HHHHHHhc--CCCceEEEEechhHhhHHhhhhcCCCceeEEEee
Confidence 34444443 4445777777889999999988887776655543
No 227
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=34.93 E-value=2e+02 Score=30.97 Aligned_cols=35 Identities=29% Similarity=0.454 Sum_probs=24.2
Q ss_pred CCceEEEE--cC----C-----CchHHHHHHHHHcCCcEEEEecCC
Q 003552 406 GFPDFIIG--NY----S-----DGNLVASLLAYKMGITQCTIAHAL 440 (811)
Q Consensus 406 ~~PDlIh~--h~----~-----~~~lva~lla~~lgvp~v~t~H~l 440 (811)
.+||+|.+ |. . .|...|++-+..+|+|-+..-+..
T Consensus 82 ~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 82 PRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred CCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 45999984 11 1 145677788888999988776653
No 228
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=34.79 E-value=4.9e+02 Score=26.23 Aligned_cols=109 Identities=9% Similarity=0.176 Sum_probs=64.5
Q ss_pred eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHc-cccEEEecCCCCC----C
Q 003552 604 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEA----F 678 (811)
Q Consensus 604 v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~-aadvfV~PS~~E~----f 678 (811)
++++|+.+.+. ....+....+..+ .+..++. ..+..+....+.. ..|++++-....+ -
T Consensus 4 ~~Ilivdd~~~-----------~~~~l~~~L~~~~---~~~~v~~---~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~ 66 (216)
T PRK10840 4 MNVIIADDHPI-----------VLFGIRKSLEQIE---WVNVVGE---FEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 (216)
T ss_pred eEEEEECCcHH-----------HHHHHHHHHhcCC---CCEEEEE---ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCC
Confidence 56777776654 2344555554432 2322221 1123445555432 3688776543332 5
Q ss_pred CHHHHHHHH---cCCCEEE-cCCCCc---ccccccCCcEEEECCCCHHHHHHHHHHHH
Q 003552 679 GLTVVEAMT---CGLPTFA-TCHGGP---AEIIEHGASGFHIDPYHPDQAAELMADFF 729 (811)
Q Consensus 679 GltvlEAMa---~GlPVIA-T~~GG~---~EiI~dg~~G~li~p~D~e~lA~aI~~~l 729 (811)
|+.+++.+. .++|+|+ |..... .+.++.|..||+..|.+++++.++|..+.
T Consensus 67 g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred HHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 777777764 3567776 444332 24467799999999999999999987654
No 229
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=34.61 E-value=4.5e+02 Score=28.56 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=22.0
Q ss_pred CCCceEEEE--cC----------CCchHHHHHHHHHcCCcEEEEec
Q 003552 405 QGFPDFIIG--NY----------SDGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 405 ~~~PDlIh~--h~----------~~~~lva~lla~~lgvp~v~t~H 438 (811)
..+||+|++ |. ..|...|++-+...|+|-+..-.
T Consensus 82 ~~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 82 GRKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred cCCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 458999983 11 12345566777788999776543
No 230
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=33.73 E-value=1.1e+02 Score=32.95 Aligned_cols=113 Identities=13% Similarity=0.095 Sum_probs=60.7
Q ss_pred CccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEecc-ccCcCChHHHH
Q 003552 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAA-QTNRARNGELY 659 (811)
Q Consensus 582 ~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~-~V~flG~-~~~~v~~~el~ 659 (811)
+-.|=...|..|+.-+......-.+++||..+. ....+.+.+...|..- .=+|+|- -+|...
T Consensus 50 dL~kT~~~L~~Aa~~i~~i~~~~~Il~Vstr~~-----------~~~~V~k~A~~tg~~~i~~Rw~pGtlTN~~~----- 113 (249)
T PTZ00254 50 NLAKTWEKLKLAARVIAAIENPADVVVVSSRPY-----------GQRAVLKFAQYTGASAIAGRFTPGTFTNQIQ----- 113 (249)
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCHH-----------HHHHHHHHHHHhCCeEECCcccCCCCCCccc-----
Confidence 444555566666555443222345678887765 2344555555554321 1157762 233221
Q ss_pred HHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEc-CCCCcccccccCCcEEEECCCC
Q 003552 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 717 (811)
Q Consensus 660 ~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT-~~GG~~EiI~dg~~G~li~p~D 717 (811)
..+.. =|+.|+..- -.=...+.||-.+|+||||- +.....+.| -+.|+-+|
T Consensus 114 ~~f~~-P~llIV~Dp-~~d~qAI~EA~~lnIPvIal~DTds~p~~V-----Dy~IP~Nd 165 (249)
T PTZ00254 114 KKFME-PRLLIVTDP-RTDHQAIREASYVNIPVIALCDTDSPLEYV-----DIAIPCNN 165 (249)
T ss_pred cccCC-CCEEEEeCC-CcchHHHHHHHHhCCCEEEEecCCCCcccC-----ceeeCCCC
Confidence 11111 344444322 22256799999999999995 666666665 25565555
No 231
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=33.05 E-value=3.2e+02 Score=28.15 Aligned_cols=77 Identities=12% Similarity=0.088 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcccc-EEEecCCCCCCCHHHHHHHHcCCCEEEcCCC
Q 003552 622 EEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 698 (811)
Q Consensus 622 e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aad-vfV~PS~~E~fGltvlEAMa~GlPVIAT~~G 698 (811)
.-....+.+++.++++|..-.+.+.+.-+.......+-++++...| +++.|...+...-.+-++...|+|||..+.+
T Consensus 12 ~~~~~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 12 FWQQVIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3344556666677776654322212211111112223334444456 4556666667777788899999999998777
No 232
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=32.36 E-value=94 Score=32.05 Aligned_cols=47 Identities=21% Similarity=0.371 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003552 386 WPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (811)
Q Consensus 386 ~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~ 433 (811)
|..+......+.+++.+. +.+||+|++-.-.|...|.+++..+++.-
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~ 55 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKP 55 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCc
Confidence 556667777778888754 67999999988888889999999999853
No 233
>PLN00016 RNA-binding protein; Provisional
Probab=31.35 E-value=49 Score=37.26 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=27.8
Q ss_pred CCcceEEEE----cccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEeccC
Q 003552 276 PMVFNVVIL----SPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 341 (811)
Q Consensus 276 pm~~rI~iv----S~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~~ 341 (811)
.|.+||+|+ ..+|+.|. .|++.|.++||+|+ ++++..
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~-------------------------~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGF-------------------------YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred cccceEEEEeccCCCceeEhH-------------------------HHHHHHHHCCCEEE----EEecCC
Confidence 456889999 66665331 57778899999999 888764
No 234
>PRK06988 putative formyltransferase; Provisional
Probab=30.00 E-value=2.3e+02 Score=31.33 Aligned_cols=14 Identities=21% Similarity=0.449 Sum_probs=10.0
Q ss_pred HHHHHHHHCCCcee
Q 003552 318 EMLLRIKRQGLDIS 331 (811)
Q Consensus 318 ~L~~~L~~~GheV~ 331 (811)
...+.|.+.|++|.
T Consensus 16 ~~L~~L~~~~~~i~ 29 (312)
T PRK06988 16 RCLQVLLARGVDVA 29 (312)
T ss_pred HHHHHHHhCCCCEE
Confidence 34556777899976
No 235
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=29.96 E-value=3.7e+02 Score=31.10 Aligned_cols=104 Identities=10% Similarity=0.033 Sum_probs=68.1
Q ss_pred CCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003552 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (811)
Q Consensus 571 ~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (811)
...+.+..+...+..-..-|++++. +.+|++++++.-..+. ..+...+.++-.-.+.+++
T Consensus 49 ~p~vWiHaaSVGEv~a~~pLv~~l~---~~~P~~~ilvTt~T~T--------------g~e~a~~~~~~~v~h~YlP--- 108 (419)
T COG1519 49 GPLVWIHAASVGEVLAALPLVRALR---ERFPDLRILVTTMTPT--------------GAERAAALFGDSVIHQYLP--- 108 (419)
T ss_pred CCeEEEEecchhHHHHHHHHHHHHH---HhCCCCCEEEEecCcc--------------HHHHHHHHcCCCeEEEecC---
Confidence 3457788888888877777777654 5678999998887665 1233444455444566665
Q ss_pred CcCChHHHHHHHHc-cccEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 003552 651 NRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (811)
Q Consensus 651 ~~v~~~el~~~ia~-aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~ 696 (811)
.-...-+.++++. .-|+.|. .-.|-+|+++.|+-..|+|++--+
T Consensus 109 -~D~~~~v~rFl~~~~P~l~Ii-~EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 109 -LDLPIAVRRFLRKWRPKLLII-METELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred -cCchHHHHHHHHhcCCCEEEE-EeccccHHHHHHHHHcCCCEEEEe
Confidence 2233445555543 1233332 346889999999999999998754
No 236
>PRK04531 acetylglutamate kinase; Provisional
Probab=29.45 E-value=1.5e+02 Score=34.07 Aligned_cols=57 Identities=7% Similarity=0.056 Sum_probs=36.9
Q ss_pred CCCCEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEE-eCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003552 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (811)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIV-G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 643 (811)
+.+..++-+|.=.-..+++.++..++.+... ..++||| |+|+. +.++.++.|++.+.
T Consensus 35 ~~~~~VIKiGG~~l~~~~~~l~~dla~L~~~--G~~~VlVHGggpq---------------I~~~l~~~gie~~~ 92 (398)
T PRK04531 35 AERFAVIKVGGAVLRDDLEALASSLSFLQEV--GLTPIVVHGAGPQ---------------LDAELDAAGIEKET 92 (398)
T ss_pred CCcEEEEEEChHHhhcCHHHHHHHHHHHHHC--CCcEEEEECCCHH---------------HHHHHHHcCCCcEE
Confidence 4466666666522223578888888888765 3566666 55544 56778888887543
No 237
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=29.22 E-value=1.8e+02 Score=31.37 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=26.2
Q ss_pred CceEEEEc----CCCchHHHHHHHHHcCCcEEEEecCC
Q 003552 407 FPDFIIGN----YSDGNLVASLLAYKMGITQCTIAHAL 440 (811)
Q Consensus 407 ~PDlIh~h----~~~~~lva~lla~~lgvp~v~t~H~l 440 (811)
.||+|.|- +.+++.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 59999853 23457899999999999988766543
No 238
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=29.02 E-value=4.9e+02 Score=27.69 Aligned_cols=34 Identities=12% Similarity=0.026 Sum_probs=21.3
Q ss_pred CCCceEEE--EcCCCchHHHHHHHHHcCCcEEEEec
Q 003552 405 QGFPDFII--GNYSDGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 405 ~~~PDlIh--~h~~~~~lva~lla~~lgvp~v~t~H 438 (811)
...+|.|. |....+.-+...+-+.+|+|++....
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 44678766 33334444555666779999976544
No 239
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=28.75 E-value=4.2e+02 Score=27.77 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=62.1
Q ss_pred cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEE-Ee-ccccCcCChHHHHH
Q 003552 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFR-WI-AAQTNRARNGELYR 660 (811)
Q Consensus 584 ~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~-L~~~V~-fl-G~~~~~v~~~el~~ 660 (811)
.+|++....-.+... ....+.|+|+|.+. ....+-.++.+.+.+.| + -|. |. +....+.....--+
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld~------~yp~~n~~l~~~i~~~ggl--liSe~p~~~~~~~~~f~~RNr 150 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLDQ------IYPRQNSKLAAKIAENGGL--LLSEYPPDTKPIKYNFPKRNR 150 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCcc------CCchhhHHHHHHHHHcCCE--EEEecCCCCCCCcccHHHHHH
Confidence 679988877655432 23466777777541 11112233333333333 2 011 10 11001111123344
Q ss_pred HHHccccEEEecCCCCCCC--HHHHHHHHcCCCEEEcC-------CCCcccccccCCcEEEECCCCHHHHH
Q 003552 661 YIADTKGAFVQPAFYEAFG--LTVVEAMTCGLPTFATC-------HGGPAEIIEHGASGFHIDPYHPDQAA 722 (811)
Q Consensus 661 ~ia~aadvfV~PS~~E~fG--ltvlEAMa~GlPVIAT~-------~GG~~EiI~dg~~G~li~p~D~e~lA 722 (811)
+++..+++.|...-.+.-| .++-.|+..|+||+|-. ..|...+|++|- ..+. +.+++.
T Consensus 151 iia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~GA-~~i~---~~~d~~ 217 (220)
T TIGR00732 151 IISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQGA-ALIT---SAKDIL 217 (220)
T ss_pred HHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCCC-EEEC---CHHHHH
Confidence 4554455555443333334 57889999999999973 246677888873 3333 455543
No 240
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=28.46 E-value=2.3e+02 Score=30.37 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=21.6
Q ss_pred CCceEEE-EcCCCc---hHHHHHHHHHcCCcEEEEec
Q 003552 406 GFPDFII-GNYSDG---NLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 406 ~~PDlIh-~h~~~~---~lva~lla~~lgvp~v~t~H 438 (811)
.++++|+ +.++.. .--+.-+|+.+|+|++-...
T Consensus 64 ~~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 64 EGIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred CCCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 4788877 333332 34566778889999876544
No 241
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=27.79 E-value=1.1e+02 Score=30.63 Aligned_cols=40 Identities=25% Similarity=0.486 Sum_probs=29.1
Q ss_pred HHHHHHHccccEEEecCC----CCCCCH--HHHHHHHcCCCEEEcC
Q 003552 657 ELYRYIADTKGAFVQPAF----YEAFGL--TVVEAMTCGLPTFATC 696 (811)
Q Consensus 657 el~~~ia~aadvfV~PS~----~E~fGl--tvlEAMa~GlPVIAT~ 696 (811)
.+.+.+.+.+|++|.--+ .|+-|+ .+.+|++.|+||+++-
T Consensus 85 ~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V 130 (159)
T PF10649_consen 85 ALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAV 130 (159)
T ss_pred HHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEE
Confidence 344556656898887644 355555 5899999999999973
No 242
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=27.62 E-value=25 Score=29.24 Aligned_cols=36 Identities=31% Similarity=0.392 Sum_probs=26.2
Q ss_pred CCCCCcchHHHH---HHHHhHhHHHHHHHHHHHHhcCCc
Q 003552 5 KLSRIPSIRERV---EDTLSVHRNELVSLLSRYVAQGKG 40 (811)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 40 (811)
.+.|+++|...+ +....-...+|.+||.+.++.||=
T Consensus 13 ~l~RIh~mLkmf~~~~~~~~~s~~eL~~fL~~lv~e~~L 51 (60)
T PF08672_consen 13 PLDRIHSMLKMFPKDPGGYDISLEELQEFLDRLVEEGKL 51 (60)
T ss_dssp EHHHHHHHHHHH-GGG--TT--HHHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHCCcE
Confidence 467889988887 333466778999999999999873
No 243
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=26.67 E-value=2.9e+02 Score=29.59 Aligned_cols=128 Identities=16% Similarity=0.126 Sum_probs=72.8
Q ss_pred HHHHHccccEEEecC-CCCCCCHHHHHHHHcCCCEEEcCCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHH
Q 003552 659 YRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (811)
Q Consensus 659 ~~~ia~aadvfV~PS-~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~ 737 (811)
..-+.+ ||++|.-- -+|+|=-.+++.+ .+.++++...++..+- .....-++.+|.+...+++.|.+.|. ..||+
T Consensus 47 ~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L~--~~dP~ 121 (264)
T cd01020 47 AAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADALV--KADPD 121 (264)
T ss_pred HHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHHH--HhCcc
Confidence 344664 88877653 3566555566655 4556666544432110 11234578899999999999999884 46898
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhhHHHHHHHhhHHHHHHhhccc
Q 003552 738 HWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFR 797 (811)
Q Consensus 738 ~~~~ms~~a~~~v~e~yswe~~a~~ll~Ly~~~~f~~~~~~~~~~~~~~y~~~~~~~~~~ 797 (811)
..+...+++.+...+ ++..-+++.+....+.--+++. -...-.|+.--|.|...
T Consensus 122 ~~~~y~~N~~~~~~~---l~~l~~~~~~~~~~~~~~~~v~---~H~af~Y~~~~yGl~~~ 175 (264)
T cd01020 122 NKKYYQANAKKFVAS---LKPLAAKIAELSAKYKGAPVAA---TEPVFDYLLDALGMKER 175 (264)
T ss_pred cHHHHHHHHHHHHHH---HHHHHHHHHHHHhhCCCCeEEE---eCchHHHHHHHCCCccc
Confidence 888888888777643 3333344433332221001111 12345666666666644
No 244
>PRK12342 hypothetical protein; Provisional
Probab=26.53 E-value=1.8e+02 Score=31.35 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=26.4
Q ss_pred CceEEEEcC----CCchHHHHHHHHHcCCcEEEEecCC
Q 003552 407 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHAL 440 (811)
Q Consensus 407 ~PDlIh~h~----~~~~lva~lla~~lgvp~v~t~H~l 440 (811)
.||+|.+-. .+.+.++..+|..+|.|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 599998532 3347899999999999998877654
No 245
>TIGR01568 A_thal_3678 uncharacterized plant-specific domain TIGR01568. This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.
Probab=25.90 E-value=1.1e+02 Score=26.12 Aligned_cols=50 Identities=20% Similarity=0.365 Sum_probs=36.1
Q ss_pred CCCCchhHHHHhhhccCccCCCCcHHHHHHHHHHHHHhhcCCCcc--hHHHHh
Q 003552 222 PDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPS--TLEKFL 272 (811)
Q Consensus 222 ~~~~~~~~~~~~~~~g~~~gwg~~~~r~~~~~~~~~~~~~~p~~~--~le~f~ 272 (811)
...||.+|+.-+++|=-|.|-+.+-+.+.|.+.-+.. |++|+.+ .+.+|.
T Consensus 7 S~DPy~DFr~SM~EMI~~~~i~~~w~~LeeLL~cYL~-LN~~~~H~~Iv~AF~ 58 (66)
T TIGR01568 7 SDDPYEDFRRSMEEMIEERELEADWKELEELLACYLD-LNPKKSHRFIVRAFV 58 (66)
T ss_pred CCChHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-hCCchhhhHHHHHHH
Confidence 5679999999999998888866554666666666554 6677655 455654
No 246
>COG4195 Phage-related replication protein [General function prediction only]
Probab=25.88 E-value=79 Score=32.31 Aligned_cols=61 Identities=25% Similarity=0.248 Sum_probs=36.7
Q ss_pred cHHHHHHHHHHHHHhhcCCCcchHHHHhcCCCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHH
Q 003552 245 TAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLR 322 (811)
Q Consensus 245 ~~~r~~~~~~~~~~~~~~p~~~~le~f~~~~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~ 322 (811)
.+++.-....-|.+...+-|+..+.. .+. --+|+|++||| ||.+--+-|+||+++++-+-.
T Consensus 7 ~~~d~y~~f~~Lse~esp~dy~ii~~--e~~--~S~v~ilapHG-------------G~IE~GvSELare~s~e~S~y 67 (208)
T COG4195 7 SAEDEYSNFASLSENESPVDYGIIYT--EKL--GSRVLILAPHG-------------GGIEGGVSELAREFSDEYSGY 67 (208)
T ss_pred CccccccCHHHHHhccCcccCCeEEe--ecc--CceEEEEeccC-------------CccCccHHHHHHHHHHHHHHH
Confidence 34444444455555444334443321 111 24799999998 788888888888887764433
No 247
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=25.79 E-value=2e+02 Score=30.10 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=19.7
Q ss_pred CCceEEEEcCCC--chHHHHHHHHH-cCCcEEE
Q 003552 406 GFPDFIIGNYSD--GNLVASLLAYK-MGITQCT 435 (811)
Q Consensus 406 ~~PDlIh~h~~~--~~lva~lla~~-lgvp~v~ 435 (811)
...|++.+-... .|.+++.++++ +|+|.++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~vi 97 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVI 97 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEE
Confidence 477887754433 47777777766 8988654
No 248
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=25.13 E-value=4.2e+02 Score=28.58 Aligned_cols=85 Identities=18% Similarity=0.251 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEecCC---CCCCCHHHHHHHHcCCCEEEcCCCCc
Q 003552 624 IAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGGP 700 (811)
Q Consensus 624 ~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~---~E~fGltvlEAMa~GlPVIAT~~GG~ 700 (811)
....+.+++.++++|+. +..... .+..+.....+.+....|+++.+.. ...+...+..+..+++||+++.
T Consensus 146 ~~~~~~~~~~a~~~g~~--l~~~~v-~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~---- 218 (294)
T PF04392_consen 146 VAQIEQLRKAAKKLGIE--LVEIPV-PSSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSS---- 218 (294)
T ss_dssp HHHHHHHHHHHHHTT-E--EEEEEE-SSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESS----
T ss_pred HHHHHHHHHHHHHcCCE--EEEEec-CcHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECC----
Confidence 45677888888888874 333321 1222333444445445787777653 2344445566778999999975
Q ss_pred ccccccCCc-EEEECC
Q 003552 701 AEIIEHGAS-GFHIDP 715 (811)
Q Consensus 701 ~EiI~dg~~-G~li~p 715 (811)
...+.+|.- |+.++.
T Consensus 219 ~~~v~~Gal~~~~~~~ 234 (294)
T PF04392_consen 219 DFYVKAGALGGYSVDY 234 (294)
T ss_dssp HHHHCTT-SEEEE--H
T ss_pred HHHhcCCcEEEEccCH
Confidence 233444433 444443
No 249
>PRK09213 pur operon repressor; Provisional
Probab=25.04 E-value=6e+02 Score=27.71 Aligned_cols=33 Identities=12% Similarity=0.069 Sum_probs=28.2
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003552 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 406 ~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H 438 (811)
.++|+|.+-...|-.+|..+|..+++|+++.=+
T Consensus 129 ~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK 161 (271)
T PRK09213 129 KKIDAVMTVETKGIPLAYAVANYLNVPFVIVRR 161 (271)
T ss_pred cCCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 379999998888888899999999999887654
No 250
>PLN02764 glycosyltransferase family protein
Probab=25.01 E-value=6.1e+02 Score=29.73 Aligned_cols=25 Identities=20% Similarity=0.325 Sum_probs=18.7
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003552 407 FPDFIIGNYSDGNLVASLLAYKMGITQC 434 (811)
Q Consensus 407 ~PDlIh~h~~~~~lva~lla~~lgvp~v 434 (811)
+||.|++.. . ..+.-+|+++|||.+
T Consensus 108 ~~~~iV~D~--~-~w~~~vA~~~gIP~~ 132 (453)
T PLN02764 108 EPDLIFFDF--A-HWIPEVARDFGLKTV 132 (453)
T ss_pred CCCEEEECC--c-hhHHHHHHHhCCCEE
Confidence 688888773 3 456678889999955
No 251
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=24.19 E-value=75 Score=36.16 Aligned_cols=52 Identities=21% Similarity=0.438 Sum_probs=38.0
Q ss_pred cCCCcchHHHHhcCCCCcceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEecc
Q 003552 261 QAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (811)
Q Consensus 261 ~~p~~~~le~f~~~~pm~~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~ 340 (811)
.+|.+..-..|-+..+.-+||+|+...|+.|. .+++.|.++|++|. ++++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~IG~-------------------------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGYIGK-------------------------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcHHHH-------------------------HHHHHHHHCCCEEE----EEEec
Confidence 45666666777788888889999876665321 56677889999998 78775
Q ss_pred C
Q 003552 341 I 341 (811)
Q Consensus 341 ~ 341 (811)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 3
No 252
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=24.02 E-value=6.6e+02 Score=24.26 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=49.8
Q ss_pred HHHHHHHH-ccccEEEecCC-CCCCCHHHHHHHHcCCCEEEc-CCCCcc---cccccCCcEEEECCCCHHHHHHHHHHHH
Q 003552 656 GELYRYIA-DTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFAT-CHGGPA---EIIEHGASGFHIDPYHPDQAAELMADFF 729 (811)
Q Consensus 656 ~el~~~ia-~aadvfV~PS~-~E~fGltvlEAMa~GlPVIAT-~~GG~~---EiI~dg~~G~li~p~D~e~lA~aI~~~l 729 (811)
.+....+. ...|++++-.. .+.-|..+++.+....|+++. ...... +.+..|..|++..|.+.+.+.++|..++
T Consensus 37 ~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 37 REALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 34444443 23577776543 345577888888778888874 333322 3456788999999999999999997665
No 253
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=23.71 E-value=1.5e+02 Score=29.96 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=46.9
Q ss_pred HHHHHHHHccccEEEecCC------CCCCCHHHHHHHHcCCCEEEcCC-----CCcccccccCCcEEE-ECCCCHHHHHH
Q 003552 656 GELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATCH-----GGPAEIIEHGASGFH-IDPYHPDQAAE 723 (811)
Q Consensus 656 ~el~~~ia~aadvfV~PS~------~E~fGltvlEAMa~GlPVIAT~~-----GG~~EiI~dg~~G~l-i~p~D~e~lA~ 723 (811)
..+.+.+.+ ||+.+.--. .-.|.-.+-|.|-|++|+|||-+ +...+ +.....-++ ++|.|-+.+..
T Consensus 92 ~al~rA~~~-aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P~v~~-ik~~~~v~v~lt~~NR~~i~~ 169 (179)
T COG1618 92 PALRRALEE-ADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHPLVQR-IKKLGGVYVFLTPENRNRILN 169 (179)
T ss_pred HHHHHHhhc-CCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCChHHHH-hhhcCCEEEEEccchhhHHHH
Confidence 345566664 888886422 23455668889999999999832 33333 333333344 89999998887
Q ss_pred HHHHHH
Q 003552 724 LMADFF 729 (811)
Q Consensus 724 aI~~~l 729 (811)
.|...+
T Consensus 170 ~Il~~L 175 (179)
T COG1618 170 EILSVL 175 (179)
T ss_pred HHHHHh
Confidence 776654
No 254
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=23.62 E-value=1.2e+02 Score=25.36 Aligned_cols=48 Identities=23% Similarity=0.421 Sum_probs=35.5
Q ss_pred CCCchhHHHHhhhccCccCCCCcHHHHHHHHHHHHHhhcCCCcc--hHHHHh
Q 003552 223 DTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPS--TLEKFL 272 (811)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~gwg~~~~r~~~~~~~~~~~~~~p~~~--~le~f~ 272 (811)
..||.+|+.-+++|=-|+|-. +.+.+.|-+.-+.. |++|..+ .+++|.
T Consensus 2 ~DP~~DFr~SM~EMI~~~~i~-~~~~LeeLL~cYL~-LN~~~~H~~Iv~aF~ 51 (59)
T PF04844_consen 2 SDPYEDFRESMVEMIEENGIR-DWDDLEELLACYLS-LNSPEHHKFIVEAFV 51 (59)
T ss_pred CCHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHH-hCChhhhhHHHHHHH
Confidence 469999999999999999988 55666666666554 6677655 455554
No 255
>COG3181 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.40 E-value=1.1e+03 Score=26.46 Aligned_cols=150 Identities=16% Similarity=0.168 Sum_probs=81.9
Q ss_pred CEEEEEeccCccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCc
Q 003552 573 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 652 (811)
Q Consensus 573 ~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~ 652 (811)
|-++.+-.=.+.|.+..|++.++.. |. .+.+.|.+.. + ...-.+..+++..|. .+.++.+-..
T Consensus 123 p~~l~v~~~s~~~t~~dlv~~~k~~----p~-~v~~~~~g~G---s------~dhl~~~~~~k~~Gi--~~~~Vpy~g~- 185 (319)
T COG3181 123 PGVLVVRADSPYKTLKDLVAYAKAD----PG-SVIGGGSGLG---S------ADHLAGALFAKAAGI--KITYVPYKGG- 185 (319)
T ss_pred cceEEEeCCCCcccHHHHHHHHHhC----CC-eEEecCCCCC---c------HHHHHHHHHHHHhCC--ceeEEeecCc-
Confidence 3344444445789999999998865 44 3333344432 1 113345667777787 5777763222
Q ss_pred CChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcC----CCEEEc-CCCCccc---ccc-------cCCcEEEECCCC
Q 003552 653 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFAT-CHGGPAE---IIE-------HGASGFHIDPYH 717 (811)
Q Consensus 653 v~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~G----lPVIAT-~~GG~~E---iI~-------dg~~G~li~p~D 717 (811)
.+.+-.++....|+.+.- ..|. .+-.-+| +.|++. +..+..+ ..+ ..-+|+..+++-
T Consensus 186 --gea~taLlgg~v~a~~~~-~se~-----~~~vksG~lr~Lav~s~eRl~~~pdvPT~~E~G~~~~~~~wrgvfap~g~ 257 (319)
T COG3181 186 --GEALTALLGGHVDAGSTN-LSEL-----LSQVKSGTLRLLAVFSEERLPGLPDVPTLKEQGYDVVMSIWRGVFAPAGT 257 (319)
T ss_pred --cHHHHHHhcCceeeeecC-hhhh-----hhhhccCceEEEEeechhhcCCCCCCCChHhcCCceeeeeeeEEEeCCCC
Confidence 333444443334443321 1121 1111121 112111 1111111 111 234688899999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003552 718 PDQAAELMADFFGKCKENPSHWKKISDGGL 747 (811)
Q Consensus 718 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 747 (811)
+++..+++.+.+++.+++|+..+.+.+.+.
T Consensus 258 ~~e~~~~~~~a~kk~l~s~e~~~~~~~~~~ 287 (319)
T COG3181 258 PDEIIAKLSAALKKALASPEWQKRLKELGL 287 (319)
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHhcCC
Confidence 999999999999999999997776655544
No 256
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=23.13 E-value=8.4e+02 Score=25.75 Aligned_cols=98 Identities=13% Similarity=0.065 Sum_probs=49.8
Q ss_pred ccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc---EEEec-cccCcCChHHH
Q 003552 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ---FRWIA-AQTNRARNGEL 658 (811)
Q Consensus 583 ~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~---V~flG-~~~~~v~~~el 658 (811)
...|+..+++.+++ ..+++.|+-++.. ..+....+.+++.+. ..+.+ ......+..++
T Consensus 102 ~~pg~~elL~~L~~-----~g~~l~I~T~~~~-------------~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~ 163 (267)
T PRK13478 102 PIPGVLEVIAALRA-----RGIKIGSTTGYTR-------------EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWM 163 (267)
T ss_pred CCCCHHHHHHHHHH-----CCCEEEEEcCCcH-------------HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHH
Confidence 34566666665543 2577888766544 233334444433221 22222 11123455666
Q ss_pred HHHHHccccEEEe-cCC---CCCCCHHHHHHHHcCCCEEEcCCCCc
Q 003552 659 YRYIADTKGAFVQ-PAF---YEAFGLTVVEAMTCGLPTFATCHGGP 700 (811)
Q Consensus 659 ~~~ia~aadvfV~-PS~---~E~fGltvlEAMa~GlPVIAT~~GG~ 700 (811)
+.......+ +. |+. .+--..=+.=|-++|+++|+...|+.
T Consensus 164 ~~~a~~~l~--~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 164 ALKNAIELG--VYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHHHHHHcC--CCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 655443222 22 221 23333446667799999999876654
No 257
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=22.49 E-value=3.7e+02 Score=29.20 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=56.6
Q ss_pred cceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEecc--CCCCCCCcccc--ceeeecCccCeEEEEecCccccccccc
Q 003552 303 GQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL--IPDAKGTTCNQ--RLERVSGTEHTHILRVPFRSEKGILRQ 378 (811)
Q Consensus 303 G~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~--~p~~~~~~~~~--~~e~i~~~~~v~Ilrvp~~~~~~~~~~ 378 (811)
|-...+. .|.+.+.++|+.|- |++-. .|-..|....+ +.+.....+++.|-..+.+...|
T Consensus 41 GKSTli~--------~l~~~~~~~g~~Va----VlAVDPSSp~tGGAlLGDRiRM~~~~~d~~vfIRS~atRG~lG---- 104 (266)
T PF03308_consen 41 GKSTLID--------ALIRELRERGKRVA----VLAVDPSSPFTGGALLGDRIRMQELSRDPGVFIRSMATRGSLG---- 104 (266)
T ss_dssp SHHHHHH--------HHHHHHHHTT--EE----EEEE-GGGGCC---SS--GGGCHHHHTSTTEEEEEE---SSHH----
T ss_pred cHHHHHH--------HHHHHHhhcCCceE----EEEECCCCCCCCCcccccHHHhcCcCCCCCEEEeecCcCCCCC----
Confidence 6666777 77778889999999 66544 33333333333 34444555688888888776532
Q ss_pred cccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003552 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (811)
Q Consensus 379 ~isr~~i~~~l~~f~~~~~~~i~~~~~~~PDlIh~h~~~~~lva~lla~~lgvp~v~t~H 438 (811)
-+...+.++...+.+ ..+|+|+......+-.-.-++....+.+++..=
T Consensus 105 ---------Gls~~t~~~v~ll~a---aG~D~IiiETVGvGQsE~~I~~~aD~~v~v~~P 152 (266)
T PF03308_consen 105 ---------GLSRATRDAVRLLDA---AGFDVIIIETVGVGQSEVDIADMADTVVLVLVP 152 (266)
T ss_dssp ---------HHHHHHHHHHHHHHH---TT-SEEEEEEESSSTHHHHHHTTSSEEEEEEES
T ss_pred ---------CccHhHHHHHHHHHH---cCCCEEEEeCCCCCccHHHHHHhcCeEEEEecC
Confidence 123344455554443 379999977665444444555555555544443
No 258
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=22.41 E-value=2.9e+02 Score=26.53 Aligned_cols=40 Identities=28% Similarity=0.233 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHcCCCce--EEEEcCCCc----hHHHHHHHHHcC
Q 003552 390 ETFTEDVGSEITAELQGFPD--FIIGNYSDG----NLVASLLAYKMG 430 (811)
Q Consensus 390 ~~f~~~~~~~i~~~~~~~PD--lIh~h~~~~----~lva~lla~~lg 430 (811)
+.+...+.+.+... ..+++ -+|.+-+.| ++.+.+++..+|
T Consensus 71 ~~~~~~I~~~i~~l-~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 71 LTFMSIAAKEVKKE-RENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHHHHHHHHHH-hhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 45555555555443 44666 699887776 556666666665
No 259
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=22.01 E-value=7.6e+02 Score=24.92 Aligned_cols=120 Identities=12% Similarity=0.081 Sum_probs=65.6
Q ss_pred ccCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe-c--cccCcCChHHHH
Q 003552 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI-A--AQTNRARNGELY 659 (811)
Q Consensus 583 ~~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl-G--~~~~~v~~~el~ 659 (811)
...|+..+++.+.+. .+++.|+-++.. ..+....+.+|+.+.+..+ | ......+..+.+
T Consensus 83 ~~~g~~~~l~~L~~~-----g~~~~i~S~~~~-------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~ 144 (214)
T PRK13288 83 EYETVYETLKTLKKQ-----GYKLGIVTTKMR-------------DTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPV 144 (214)
T ss_pred cCcCHHHHHHHHHHC-----CCeEEEEeCCCH-------------HHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHH
Confidence 356666666655532 578888877654 4556667778886644322 2 111234556666
Q ss_pred HHHHccccEEEecCC---CCCCCHHHHHHHHcCCCEEEcCCCC--cccccccCCcEEEECCCCHHHHHHHH
Q 003552 660 RYIADTKGAFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELM 725 (811)
Q Consensus 660 ~~ia~aadvfV~PS~---~E~fGltvlEAMa~GlPVIAT~~GG--~~EiI~dg~~G~li~p~D~e~lA~aI 725 (811)
..+.+..+ +.|+. .+--..=+.-|.++|+++|+-..|. ..+..+.+ .-+.++ +..++.+.+
T Consensus 145 ~~~~~~~~--~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~-~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 145 LKALELLG--AKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYK-PDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHcC--CCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcC-cCEEEC--CHHHHHHHH
Confidence 65553222 22321 1222344677889999999865552 33332222 335565 677766654
No 260
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=21.28 E-value=8.3e+02 Score=25.15 Aligned_cols=109 Identities=7% Similarity=0.059 Sum_probs=63.7
Q ss_pred EEEEeccCc--cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCCCcEEEeccccC
Q 003552 575 VFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLDGQFRWIAAQTN 651 (811)
Q Consensus 575 Il~vGRL~~--~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L~~~V~flG~~~~ 651 (811)
+++-|..++ ..+.+.|.+.+.++.+ ++.+++++..... +. .++...+.+..+++ |..-.+...
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~--~~~~i~~IptAs~-----~~--~~~~~~~~~a~~~l~G~~~~~~~~----- 68 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTK--ARPKVLFVPTASG-----DR--DEYTARFYAAFESLRGVEVSHLHL----- 68 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhcc--CCCeEEEECCCCC-----CH--HHHHHHHHHHHhhccCcEEEEEec-----
Confidence 334444443 3456666666666542 4578888887654 22 24566677777777 663322221
Q ss_pred cCChHHHHHHHHccccEEEecCC--------CCCCCH--HHHHHHHcCCCEEEcCCCC
Q 003552 652 RARNGELYRYIADTKGAFVQPAF--------YEAFGL--TVVEAMTCGLPTFATCHGG 699 (811)
Q Consensus 652 ~v~~~el~~~ia~aadvfV~PS~--------~E~fGl--tvlEAMa~GlPVIAT~~GG 699 (811)
.+.++..+.+.. +|++++|== ....|+ .+-++...|.|++.++.|.
T Consensus 69 -~~~~~~~~~l~~-ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 69 -FDTEDPLDALLE-ADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred -cCcccHHHHHhc-CCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 113455667775 999998831 111232 3455667899999998775
No 261
>CHL00194 ycf39 Ycf39; Provisional
Probab=21.25 E-value=85 Score=34.29 Aligned_cols=33 Identities=12% Similarity=0.418 Sum_probs=25.8
Q ss_pred ceEEEEcccccccccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEecc
Q 003552 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (811)
Q Consensus 279 ~rI~ivS~hg~~~~~~~lG~p~~GG~~vyvld~araLe~~L~~~L~~~GheV~~~ilVvT~~ 340 (811)
|||+++...|+.| + .++++|.++||+|. +++|.
T Consensus 1 MkIlVtGatG~iG-----------~--------------~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 1 MSLLVIGATGTLG-----------R--------------QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred CEEEEECCCcHHH-----------H--------------HHHHHHHHCCCeEE----EEEcC
Confidence 6899988877743 2 56778889999998 88876
No 262
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=21.19 E-value=1.3e+03 Score=26.63 Aligned_cols=67 Identities=12% Similarity=0.013 Sum_probs=41.1
Q ss_pred ChHHHHHHHHccccEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCcccccccC--CcEEEECCCCHHHHHHHH
Q 003552 654 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG--ASGFHIDPYHPDQAAELM 725 (811)
Q Consensus 654 ~~~el~~~ia~aadvfV~PS~~E~fGltvlEAMa~GlPVIAT~~GG~~EiI~dg--~~G~li~p~D~e~lA~aI 725 (811)
+.+++...+.+ +|++|..+-...+=++ ..+.-+.|.+.-|.+-|+++=..- ..|..+ .|.|++.+.+
T Consensus 232 ~~~~l~~~l~~-aDiVI~aT~a~~~vi~--~~~~~~~~~~~iDLavPRdidp~v~~l~~v~l--~~iDdl~~i~ 300 (414)
T PRK13940 232 YLSELPQLIKK-ADIIIAAVNVLEYIVT--CKYVGDKPRVFIDISIPQALDPKLGELEQNVY--YCVDDINAVI 300 (414)
T ss_pred cHHHHHHHhcc-CCEEEECcCCCCeeEC--HHHhCCCCeEEEEeCCCCCCCccccCcCCeEE--EeHHHHHHHH
Confidence 34677888886 9999987653332222 334467899999998888874321 124332 2566665544
No 263
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=21.14 E-value=1.3e+02 Score=25.05 Aligned_cols=45 Identities=16% Similarity=0.307 Sum_probs=34.5
Q ss_pred cchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhh
Q 003552 10 PSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIF 55 (811)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (811)
.||.|.+.+---...++|..+|..|.+...+ =.+.-|+.+|.+++
T Consensus 10 ~SM~EMI~~~~i~~~~~LeeLL~cYL~LN~~-~~H~~Iv~aF~dv~ 54 (59)
T PF04844_consen 10 ESMVEMIEENGIRDWDDLEELLACYLSLNSP-EHHKFIVEAFVDVW 54 (59)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhCCh-hhhhHHHHHHHHHH
Confidence 4788888777766889999999999887665 22345788888876
No 264
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=21.10 E-value=1.1e+03 Score=25.55 Aligned_cols=169 Identities=18% Similarity=0.174 Sum_probs=0.0
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEec----cCccCCHHHHHHHHHHhhccCC-CeEEEEEeCcCCCCCCcchHH
Q 003552 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR----LDHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKSKDREE 623 (811)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR----L~~~Kgi~~LleA~~~l~~~~~-~v~LVIVG~g~~~~~~~d~e~ 623 (811)
.+.++|...+..-.+-....+..++.|+..-. ++-.|-+..|-+|+.-+.+.-. .-.+++||....
T Consensus 5 sm~~lLeAGvHfGhqtr~wnpkm~~fIf~~RngihIIDL~kT~~~l~~A~~~v~~~~~~~g~ILfVgTK~~--------- 75 (252)
T COG0052 5 SMKQLLEAGVHFGHQTRRWNPKMKPFIFGERNGIHIIDLQKTLERLREAYKFLRRIAANGGKILFVGTKKQ--------- 75 (252)
T ss_pred CHHHHHHcCccccccccccCCcccccceeecCCcEEEEHHHHHHHHHHHHHHHHHHHcCCCEEEEEechHH---------
Q ss_pred HHHHHHHHHHHHHcCC-CCcEEEec-cccCcCChHHHHHHHHcccc----------------------------------
Q 003552 624 IAEIEKMHELMKTYKL-DGQFRWIA-AQTNRARNGELYRYIADTKG---------------------------------- 667 (811)
Q Consensus 624 ~~~~~~l~~li~~~~L-~~~V~flG-~~~~~v~~~el~~~ia~aad---------------------------------- 667 (811)
..+-+++.+++-|. .=+=||+| ..+|+.+...-.+-+.+ -.
T Consensus 76 --a~~~V~~~A~r~g~~yV~~RwLgG~LTN~~ti~~si~rl~~-lE~~~~~~~~~~tKkE~l~l~re~~kL~k~lgGIk~ 152 (252)
T COG0052 76 --AQEPVKEFAERTGAYYVNGRWLGGMLTNFKTIRKSIKRLKE-LEKMEEDGFDGLTKKEALMLTRELEKLEKSLGGIKD 152 (252)
T ss_pred --HHHHHHHHHHHhCCceecCcccCccccCchhHHHHHHHHHH-HHHHhhcccccccHHHHHHHHHHHHHHHHhhcchhh
Q ss_pred -------EEEecCCCCCCCHHHHHHHHcCCCEEEc-CCCCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHH
Q 003552 668 -------AFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHW 739 (811)
Q Consensus 668 -------vfV~PS~~E~fGltvlEAMa~GlPVIAT-~~GG~~EiI~dg~~G~li~p~D~e~lA~aI~~~l~~l~~dp~~~ 739 (811)
+||.=...|. +++.||--+|.||||- |+...++.| -+.||-+|..-=+=++ .+
T Consensus 153 m~~~Pd~l~ViDp~~e~--iAv~EA~klgIPVvAlvDTn~dpd~V-----D~~IP~Ndda~rsi~L------------i~ 213 (252)
T COG0052 153 MKGLPDVLFVIDPRKEK--IAVKEANKLGIPVVALVDTNCDPDGV-----DYVIPGNDDAIRSIAL------------IY 213 (252)
T ss_pred ccCCCCEEEEeCCcHhH--HHHHHHHHcCCCEEEEecCCCCCccC-----ceeecCCChHHHHHHH------------HH
Q ss_pred HHHHHHHHH
Q 003552 740 KKISDGGLK 748 (811)
Q Consensus 740 ~~ms~~a~~ 748 (811)
..++.+..+
T Consensus 214 ~~lA~ai~e 222 (252)
T COG0052 214 WLLARAILE 222 (252)
T ss_pred HHHHHHHHH
No 265
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.59 E-value=82 Score=29.55 Aligned_cols=32 Identities=38% Similarity=0.661 Sum_probs=26.2
Q ss_pred HhhhccCccCC----CCcHHHHHHHHHHHHHhhcCC
Q 003552 232 VLQGMGFEKGW----GDTAEHVLEMMHLLLDILQAP 263 (811)
Q Consensus 232 ~~~~~g~~~gw----g~~~~r~~~~~~~~~~~~~~p 263 (811)
+||+|||.--| |.+|+-+-|++...++-+.+|
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~ 60 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAP 60 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHcc
Confidence 68999999999 778999999998776655554
No 266
>PRK15408 autoinducer 2-binding protein lsrB; Provisional
Probab=20.34 E-value=8.9e+02 Score=26.79 Aligned_cols=76 Identities=8% Similarity=0.013 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCcEEEeccccCcC--ChHHHHHHHHccccEEEe-cCCCCCCCHHHHHHHHcCCCEEEcCCC
Q 003552 622 EEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA--RNGELYRYIADTKGAFVQ-PAFYEAFGLTVVEAMTCGLPTFATCHG 698 (811)
Q Consensus 622 e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v--~~~el~~~ia~aadvfV~-PS~~E~fGltvlEAMa~GlPVIAT~~G 698 (811)
.-....+.+++.++++|. .+.+.+...... ....+-.+++...|.+++ |...++..-.+-+|+..|+|||..+..
T Consensus 37 f~~~~~~Gi~~aa~~~G~--~v~~~~~~~~d~~~q~~~i~~li~~~vdgIiv~~~d~~al~~~l~~a~~~gIpVV~~d~~ 114 (336)
T PRK15408 37 FFTSGGNGAKEAGKELGV--DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSD 114 (336)
T ss_pred HHHHHHHHHHHHHHHhCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 334445556666666653 344433211000 112234445544665444 544555556788899999999998765
Q ss_pred C
Q 003552 699 G 699 (811)
Q Consensus 699 G 699 (811)
.
T Consensus 115 ~ 115 (336)
T PRK15408 115 T 115 (336)
T ss_pred C
Confidence 3
No 267
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=20.27 E-value=1.2e+03 Score=25.80 Aligned_cols=147 Identities=12% Similarity=0.098 Sum_probs=84.3
Q ss_pred CCCCEEEEEeccCccCCHHHHHHHH----HHhhccCCCeEEEEEeCcCCCCCCcchH-HHHHHHHHHHHHHHcCCCCcEE
Q 003552 570 RSKPIVFSMARLDHVKNMTGLVECY----GKNSQLRELVNLVVVAGYIDVNKSKDRE-EIAEIEKMHELMKTYKLDGQFR 644 (811)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgi~~LleA~----~~l~~~~~~v~LVIVG~g~~~~~~~d~e-~~~~~~~l~~li~~~~L~~~V~ 644 (811)
.+..+|.+.|-+.+... ..+.++. .++..+....-.|+|||.... -..+.+ -....+.+.+++++.+ ..+.
T Consensus 111 ~~~Nvl~t~ga~~~i~~-~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~-~~~~~~~~~~l~~~l~~~~~~~~--~~~~ 186 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITP-ERLAEAAAAWAPRLAALPRPRVAVLIGGDSKH-YRWDEEDAERLLDQLAALAAAYG--GSLL 186 (311)
T ss_pred CCCceEecccCCCcCCH-HHHHHHHHhhhhhhccCCCCeEEEEECcCCCC-cccCHHHHHHHHHHHHHHHHhCC--CeEE
Confidence 45567888888887554 3444433 233333345668888885442 333333 3456678888888876 3455
Q ss_pred EeccccCcCChHHHHHHHHccc----cEEEecCCCCCCCHHHHHHHHcCCCEEEcC--CCCcccccccCCcEEEECCCCH
Q 003552 645 WIAAQTNRARNGELYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATC--HGGPAEIIEHGASGFHIDPYHP 718 (811)
Q Consensus 645 flG~~~~~v~~~el~~~ia~aa----dvfV~PS~~E~fGltvlEAMa~GlPVIAT~--~GG~~EiI~dg~~G~li~p~D~ 718 (811)
.+.. +-...++...+.+.. .+.+. ..++ .+.+.+.+++.=-+|+|. +.-..|-+..|..=++++...
T Consensus 187 vttS---RRTp~~~~~~L~~~~~~~~~~~~~--~~~~-~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~- 259 (311)
T PF06258_consen 187 VTTS---RRTPPEAEAALRELLKDNPGVYIW--DGTG-ENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPG- 259 (311)
T ss_pred EEcC---CCCcHHHHHHHHHhhcCCCceEEe--cCCC-CCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCC-
Confidence 5542 333445555544322 23344 2233 456889999999999983 334577777776666665433
Q ss_pred HHHHHHHHHHH
Q 003552 719 DQAAELMADFF 729 (811)
Q Consensus 719 e~lA~aI~~~l 729 (811)
-..++.+++
T Consensus 260 --~~~r~~r~~ 268 (311)
T PF06258_consen 260 --RSGRFRRFH 268 (311)
T ss_pred --cchHHHHHH
Confidence 223454444
No 268
>PLN03004 UDP-glycosyltransferase
Probab=20.16 E-value=7.8e+02 Score=28.79 Aligned_cols=25 Identities=4% Similarity=-0.091 Sum_probs=17.1
Q ss_pred ceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003552 408 PDFIIGNYSDGNLVASLLAYKMGITQC 434 (811)
Q Consensus 408 PDlIh~h~~~~~lva~lla~~lgvp~v 434 (811)
++.|++.... ..+.-+|+++|||.+
T Consensus 113 v~cII~D~~~--~Wa~~vA~~lgIP~v 137 (451)
T PLN03004 113 VRAMIIDFFC--TAVLDITADFTFPVY 137 (451)
T ss_pred ceEEEECCcc--hhHHHHHHHhCCCEE
Confidence 3777755443 356678899999964
No 269
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=20.11 E-value=1.1e+03 Score=25.41 Aligned_cols=122 Identities=11% Similarity=0.142 Sum_probs=74.1
Q ss_pred CCCEEEEEeccCc--cCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003552 571 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (811)
Q Consensus 571 ~k~iIl~vGRL~~--~Kgi~~LleA~~~l~~~~~~v~LVIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (811)
+.|+ +.|+-..+ ..|++.+++.+++. .+.=+++=+-|. ++..++.+.++++|+. .|.++.+
T Consensus 91 ~~p~-vlm~Y~N~i~~~G~e~F~~~~~~a-----GvdgviipDLP~----------ee~~~~~~~~~~~gi~-~I~lv~P 153 (263)
T CHL00200 91 KAPI-VIFTYYNPVLHYGINKFIKKISQA-----GVKGLIIPDLPY----------EESDYLISVCNLYNIE-LILLIAP 153 (263)
T ss_pred CCCE-EEEecccHHHHhCHHHHHHHHHHc-----CCeEEEecCCCH----------HHHHHHHHHHHHcCCC-EEEEECC
Confidence 3454 36666665 56999998888765 466777777665 4577888999999995 4777774
Q ss_pred ccCcCChHHHHHHHHccccEEEec-CCCCC------CCHHHHHHH-----HcCCCEEEcCCCCc-c----cccccCCcEE
Q 003552 649 QTNRARNGELYRYIADTKGAFVQP-AFYEA------FGLTVVEAM-----TCGLPTFATCHGGP-A----EIIEHGASGF 711 (811)
Q Consensus 649 ~~~~v~~~el~~~ia~aadvfV~P-S~~E~------fGltvlEAM-----a~GlPVIAT~~GG~-~----EiI~dg~~G~ 711 (811)
.+ ..+..+.+++.++-||.- |.... .+-.+-|.+ .+++|++. .+|-- + ++...|..|+
T Consensus 154 tT----~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v-GFGI~~~e~~~~~~~~GADGv 228 (263)
T CHL00200 154 TS----SKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIIL-GFGISTSEQIKQIKGWNINGI 228 (263)
T ss_pred CC----CHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEE-ECCcCCHHHHHHHHhcCCCEE
Confidence 33 334444444457744432 33322 223344444 56899987 34422 2 3344557788
Q ss_pred EEC
Q 003552 712 HID 714 (811)
Q Consensus 712 li~ 714 (811)
++=
T Consensus 229 VVG 231 (263)
T CHL00200 229 VIG 231 (263)
T ss_pred EEC
Confidence 883
No 270
>PRK11519 tyrosine kinase; Provisional
Probab=20.07 E-value=1.2e+03 Score=29.07 Aligned_cols=43 Identities=14% Similarity=-0.001 Sum_probs=26.6
Q ss_pred HHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEecC
Q 003552 397 GSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIAHA 439 (811)
Q Consensus 397 ~~~i~~~~~~~PDlIh~h~~~~~--lva~lla~~lgvp~v~t~H~ 439 (811)
.+.+...+..++|+|+...++.. .-+..+++.....+.+.-++
T Consensus 625 ~~~ll~~l~~~yD~ViiDtpP~~~v~Da~~l~~~~d~~l~Vvr~~ 669 (719)
T PRK11519 625 FAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYA 669 (719)
T ss_pred HHHHHHHHHhcCCEEEEeCCCcccchHHHHHHHHCCeEEEEEeCC
Confidence 34444445568999998887643 23456677777665554443
Done!