Query 003553
Match_columns 811
No_of_seqs 316 out of 1610
Neff 6.1
Searched_HMMs 29240
Date Tue Mar 26 18:43:59 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003553.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1600-1604//hhsearch_pdb/003553hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gz6_A N-acetyl-D-glucosamine 1.0 1 1 289.6 21.0 260 301-690 11-272 (388)
2 1fp3_A N-acyl-D-glucosamine 2- 1.0 1 1 284.7 23.0 336 250-664 19-392 (402)
3 3ira_A Conserved protein; meth 1.0 1 1 266.2 11.9 134 100-233 1-169 (173)
4 2zbl_A Putative isomerase; N-a 1.0 1 1 265.9 23.8 305 251-695 18-355 (421)
5 3gt5_A N-acetylglucosamine 2-e 1.0 1 1 224.4 20.7 313 303-694 12-348 (402)
6 1fp3_A N-acyl-D-glucosamine 2- 1.0 1 1 209.6 23.8 310 302-693 15-351 (402)
7 2zbl_A Putative isomerase; N-a 1.0 1 1 195.7 21.5 249 318-692 27-289 (421)
8 2zzr_A Unsaturated glucuronyl 1.0 1 1 185.5 20.8 254 282-692 76-346 (397)
9 2gz6_A N-acetyl-D-glucosamine 1.0 1 1 179.3 24.7 335 249-663 16-381 (388)
10 3gt5_A N-acetylglucosamine 2-e 1.0 1 1 174.0 17.1 337 250-664 15-388 (402)
No 1
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=1.00 E-value=1 Score=289.63 Aligned_cols=260 Identities=12% Similarity=0.028 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCE-EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHH
Q ss_conf 89999999999998189831379918-9987289977898831588999999999999971-599489999999999998
Q 003553 301 EGQKMVLFTLQCMAKGGIHDHVGGGF-HRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSL-TKDVFYSYICRDILDYLR 378 (811)
Q Consensus 301 ~~~~~~~~TL~~Ma~GGi~D~igGGF-~RYsvD~~W~vPHFEKMLyDNA~Ll~~ya~Ay~~-t~d~~y~~~A~~t~~fl~ 378 (811)
+.++.+...+-......++|| +||| +||++|.. .+|| ||||||||+++++|++||++ ++++.|+++|+++++||.
T Consensus 11 ~~~~~l~~~~l~fw~~~~~D~-~GGf~~~~~~d~~-~~~~-eK~l~~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~ 87 (388)
T 2gz6_A 11 LYKNALLNDVLPFWENHSLDS-EGGYFTCLDRQGK-VYDT-DKFIWLQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLA 87 (388)
T ss_dssp HHHHHHHHTHHHHHHHHCBCT-TSSBCCEEBTTSC-EEEC-CEEHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCC-CCCEEEEECCCCC-CCCC-CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 999999996999877538789-9898767789988-6886-446899999999999999876499889999999999999
Q ss_pred HHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 71668898545403687653357555457722663279999984045999998824467997578888899887789621
Q 003553 379 RDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNV 458 (811)
Q Consensus 379 r~l~~~~Ggfysa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~l~~~~y~i~~~Gn~e~~~~~dp~~~f~g~nv 458 (811)
++|++++||||+++|+|+.+.
T Consensus 88 ~~~~~~~Gg~~~~~d~dg~~~----------------------------------------------------------- 108 (388)
T 2gz6_A 88 QHGRDDEGNWYFALTRGGEPL----------------------------------------------------------- 108 (388)
T ss_dssp HHSBCTTSCBCSEECTTSCBC-----------------------------------------------------------
T ss_pred HHCCCCCCCEEEEECCCCCCC-----------------------------------------------------------
T ss_conf 855888999899975899816-----------------------------------------------------------
Q ss_pred EECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 00247914789870999899999999999999852217999988730003008999999999999932332210136777
Q 003553 459 LIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPV 538 (811)
Q Consensus 459 L~~~~~~~~~a~~~g~~~~~~~~~l~~~r~kL~~~R~~R~~P~~DdKiltsWNalmI~ALa~A~~v~~d~~~~~~~~~~~ 538 (811)
|++..+.+||++|.||+.+|+++++
T Consensus 109 --------------------------------------------~~~~~~~~~af~i~al~~~y~~tg~----------- 133 (388)
T 2gz6_A 109 --------------------------------------------VQPYNIFSDCFAAMAFSQYALASGE----------- 133 (388)
T ss_dssp --------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred --------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHCC-----------
T ss_conf --------------------------------------------6770109999999999999998698-----------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 89991899999999999999854546999389872389878888701099999999999997299899999999999999
Q 003553 539 VGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQD 618 (811)
Q Consensus 539 ~~~~~~~yl~~A~~~~~fl~~~l~d~~~g~l~~~~~~g~~~~~~~leDYA~~i~aLL~LyeaTgd~~~L~~A~~L~~~~~ 618 (811)
++|++.|+++++++.++++++ .|.+.+.+.++. ...+ ++++++++.+++.||++|++++|++.|.++.+.+.
T Consensus 134 -----~~~l~~A~~~~~~i~~~~~d~-~g~~~~~~~~~~-~~~~-~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~ 205 (388)
T 2gz6_A 134 -----EWAKDVAMQAYNNVLRRKDNP-KGKYTKTYPGTR-PMKA-LAVPMILANLTLEMEWLLPQETLENVLAATVQEVM 205 (388)
T ss_dssp -----HHHHHHHHHHHHHHHTC---------------CC-CCEE-THHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCC-CCCC-CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf -----999999999999999883387-756475457887-8888-77799999999999997498899999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 872445798233357999964344567889998882899999999999984899864899999999999999
Q 003553 619 ELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFET 690 (811)
Q Consensus 619 ~~F~D~~~Ggff~t~~~~~~l~~R~k~~~D~a~PS~Nsv~a~~LlrL~~lt~~~~~~~y~~~A~~~l~~~~~ 690 (811)
++|+++++|++......+...+ .++..|...||+|+.++++|++++.++++ +.|++.|++++..+..
T Consensus 206 ~~~~~~~~g~~~e~~~~~w~~~--~~~~~~~~~pgh~~e~a~lL~~~~~~tgd---~~~~~~A~~~~~~~~~ 272 (388)
T 2gz6_A 206 GDFLDQEQGLMYENVAPDGSHI--DCFEGRLINPGHGIEAMWFIMDIARRKND---SKTINQAVDVVLNILN 272 (388)
T ss_dssp HTTEETTTTEECSEECTTSCCC--CSTTTTEECHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCEEEEEECCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHH
T ss_conf 9874658996888989998978--88665768888799999999999987598---7899999999999999
No 2
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=1.00 E-value=1 Score=284.68 Aligned_cols=336 Identities=10% Similarity=-0.024 Sum_probs=245.5
Q ss_pred HHHHHHHHH-HHCCCCCCCCCC------CCCCCCHHHHHH----HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999998-501256999999------999997359999----998242101358998777899999999999981898
Q 003553 250 LRLCAEQLS-KSYDSRFGGFGS------APKFPRPVEIQM----MLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGI 318 (811)
Q Consensus 250 ~~~~~~~l~-~~~D~~~GGfg~------aPKFP~p~~l~~----Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~Ma~GGi 318 (811)
++.++..+. ..+|+++|||.+ .|| |.+..+.+ +..+....... ...+++..++++.+|++.|.+++
T Consensus 19 ~~~~l~~w~~~~~D~~~GGf~~~~~~dg~~~-~~~k~l~~nar~l~~~a~a~~~~-~~~~~~~~l~~A~~~~~fl~~~~- 95 (402)
T 1fp3_A 19 LDRVMAFWLEHSHDREHGGFFTCLGRDGRVY-DDLKYVWLQGRQVWMYCRLYRKL-ERFHRPELLDAAKAGGEFLLRHA- 95 (402)
T ss_dssp HHHHHHHHHHHSBCTTTSSBCCCBCTTSCBS-CCCEEHHHHHHHHHHHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHCCCCCCCCCCEEEEECCCCCCC-CCCCCHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHC-
T ss_conf 9999987630487789999766888999997-77620142599999999999875-23588899999999999999963-
Q ss_pred CCCCCC-CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC-CCCCCEEEECCCCC
Q ss_conf 313799-1899872899778988315889999999999999715994899999999999987166-88985454036876
Q 003553 319 HDHVGG-GFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMI-GPGGEIFSAEDADS 396 (811)
Q Consensus 319 ~D~igG-GF~RYsvD~~W~vPHFEKMLyDNA~Ll~~ya~Ay~~t~d~~y~~~A~~t~~fl~r~l~-~~~Ggfysa~DADs 396 (811)
+|+.|| ||+ |++|++|.+||++|||||||.++++|+++|++|+++.|++.|+++++++++.+. +++| +|++.|++.
T Consensus 96 ~d~~gg~g~~-~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G-~f~~~~~~~ 173 (402)
T 1fp3_A 96 RVAPPEKKCA-FVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSG-LGRPQLPGA 173 (402)
T ss_dssp BSSTTSCCBC-SEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGG-GCCCCCTTS
T ss_pred CCCCCCCCEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCC
T ss_conf 1868897369-99888998065661449999999999999988598999999999999999986149875-567656676
Q ss_pred CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH---HHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCC
Q ss_conf 53357555457722663279999984045999998---824467997578888899887789621002479147898709
Q 003553 397 AETEGATRKKEGAFYVWTSKEVEDILGEHAILFKE---HYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLG 473 (811)
Q Consensus 397 ~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~l~~~---~y~i~~~Gn~e~~~~~dp~~~f~g~nvL~~~~~~~~~a~~~g 473 (811)
.+ .++. . ..-.....+.+ ++.+++. +
T Consensus 174 ~~-------~~~~----~------~~m~~~~~~l~l~~l~~~~~~----------------------------------~ 202 (402)
T 1fp3_A 174 VA-------SESM----A------VPMMLLCLVEQLGEEDEELAG----------------------------------R 202 (402)
T ss_dssp CC-------EEET----H------HHHHHHHHHHHHHTTCHHHHH----------------------------------H
T ss_pred CC-------CCCC----C------HHHHHHHHHHHHHHHHHHCCC----------------------------------H
T ss_conf 67-------7886----4------689999999999999873381----------------------------------7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC----HH--------H---HHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9989999999999999985221799998873000300----89--------9---9999999999932332210136777
Q 003553 474 MPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSW----NG--------L---VISSFARASKILKSEAESAMFNFPV 538 (811)
Q Consensus 474 ~~~~~~~~~l~~~r~kL~~~R~~R~~P~~DdKiltsW----Na--------l---mI~ALa~A~~v~~d~~~~~~~~~~~ 538 (811)
-.+.+.+.++.++++ ++.|..|+.+++|.. | |. . ..|.|+++++++++
T Consensus 203 -~~~~a~~~~~~~~~~-~~~~~~~~~e~~d~d----w~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~----------- 265 (402)
T 1fp3_A 203 -YAQLGHWCARRILQH-VQRDGQAVLENVSED----GEELSGCLGRHQNPGHALEAGWFLLRHSSRSGD----------- 265 (402)
T ss_dssp -THHHHHHHHHHHHTT-EETTTTEECSEEETT----SCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTC-----------
T ss_pred -HHHHHHHHHHHHHHH-HCCCCCEEEEEECCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-----------
T ss_conf -999999999999987-485799688888988----774678887888987388999999999997499-----------
Q ss_pred CCCCHHHHHHHHHHHHHHH-HHHCCCCCCCEEEEE-ECCCCCC-----CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 8999189999999999999-985454699938987-2389878-----88870109999999999999729989999999
Q 003553 539 VGSDRKEYMEVAESAASFI-RRHLYDEQTHRLQHS-FRNGPSK-----APGFLDDYAFLISGLLDLYEFGSGTKWLVWAI 611 (811)
Q Consensus 539 ~~~~~~~yl~~A~~~~~fl-~~~l~d~~~g~l~~~-~~~g~~~-----~~~~leDYA~~i~aLL~LyeaTgd~~~L~~A~ 611 (811)
++|++.|+++++++ .++.|+++.|+++++ ..+|.+. ....+..++.+|.|++.||++|||++||++|.
T Consensus 266 -----~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~ 340 (402)
T 1fp3_A 266 -----AKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFY 340 (402)
T ss_dssp -----HHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf -----579999999999978997114789977874058999566576887072899999999999999869999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999998724457982333579999643445678899988828999999999
Q 003553 612 ELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVR 664 (811)
Q Consensus 612 ~L~~~~~~~F~D~~~Ggff~t~~~~~~l~~R~k~~~D~a~PS~Nsv~a~~Llr 664 (811)
++++.+.++|+|+++|+||++...+..+....|. .-...|-+|..++..+++
T Consensus 341 ~~~~~~~~~f~D~~~G~w~~~~~~~g~~~~~~k~-~~~k~~yH~~r~~~~~~~ 392 (402)
T 1fp3_A 341 QVAEYTFRQFRDPEYGEWFGYLNREGKVALTIKG-GPFKGCFHVPRCLAMCEE 392 (402)
T ss_dssp HHHHHHHHHTBCTTTSSBCCEECTTSCEEECCSS-CSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCCCHHHHHHHHH
T ss_conf 9999999748389998157667888699877788-888999850999999999
No 3
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=1.00 E-value=1 Score=266.20 Aligned_cols=134 Identities=57% Similarity=1.088 Sum_probs=128.2
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHCCCEEEEE
Q ss_conf 11253365888111102589876656729999998615996999982357624577544117888799997225189997
Q 003553 100 KHTNRLAAEHSPYLLQHAHNPVDWFAWGEEAFAEARKRDVPIFLSIGYSTCHWCHVMEVESFEDEGVAKLLNDWFVSIKV 179 (811)
Q Consensus 100 ~~~NrL~~e~SpYL~qha~~~v~W~~~~~eal~~Ak~~~Kpi~i~i~~~~C~wC~~m~~~~f~d~~va~~ln~~FV~vkv 179 (811)
.++|||+.|+||||+||++|||+|++|+++++++|++++|||||+|+++||+|||+|+.++|++++|++.+|++||.|+|
T Consensus 1 ~~~n~l~~~~spyl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikV 80 (173)
T 3ira_A 1 AEPNRLIKEKSPYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKV 80 (173)
T ss_dssp CCCCGGGGCCCHHHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEE
T ss_pred CCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEE
T ss_conf 98761456799889960689977787699999999985999799624312175600466466999999999805720106
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCE-----------------------------------EEHHHHHHCHHHHHHHHHHH
Q ss_conf 1788920999999999984167580-----------------------------------55364512649999999999
Q 003553 180 DREERPDVDKVYMTYVQALYGGGGW-----------------------------------KVKDAWDKKRDMLAQSGAFA 224 (811)
Q Consensus 180 D~ee~pdid~~y~~~~q~~~g~gGW-----------------------------------~i~~~w~~~~~~i~~~a~~~ 224 (811)
|++++|+++..||.++|+++|.+|| .|.+.|+++|+++++.+.++
T Consensus 81 D~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~~~~~~~~~~~~~~~~ 160 (173)
T 3ira_A 81 DREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQHEEVLDSAEKI 160 (173)
T ss_dssp ETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77666867799999999974899874645588999851235428998678997899999999999988899999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999998740
Q 003553 225 IEQLSEALS 233 (811)
Q Consensus 225 ~~~l~~~~~ 233 (811)
++.|++...
T Consensus 161 ~~~~~~~~~ 169 (173)
T 3ira_A 161 TSTIQEMIK 169 (173)
T ss_dssp CSHHHHHHH
T ss_pred HHHHHHHHC
T ss_conf 999998630
No 4
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=1.00 E-value=1 Score=265.89 Aligned_cols=305 Identities=13% Similarity=0.038 Sum_probs=228.3
Q ss_pred HHHHHHHHHHCCCCCCCCCC-------CCCCCCHHHHHH-HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999998501256999999-------999997359999-9982421013589987778999999999999818983137
Q 003553 251 RLCAEQLSKSYDSRFGGFGS-------APKFPRPVEIQM-MLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHV 322 (811)
Q Consensus 251 ~~~~~~l~~~~D~~~GGfg~-------aPKFP~p~~l~~-Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~Ma~GGi~D~i 322 (811)
......+...+|++ ||+. -|.++.-..++- ++..+...... +++..++++.++++.|.++ ++|+.
T Consensus 18 ~~ll~f~~~~~d~~--GF~~ld~~g~~~~~~~k~~~~nar~i~~~a~a~~~----g~~~~l~~A~~~~~fl~~~-~~D~~ 90 (421)
T 2zbl_A 18 DRIFNFGKNAVVPT--GFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASM----GRPGAYDLVDHGIKAMNGA-LRDKK 90 (421)
T ss_dssp HHHHHHHGGGEETT--EECCBCTTSCBCGGGCEEHHHHHHHHHHHHHHHHT----TCTTHHHHHHHHHHHHTTT-TBCTT
T ss_pred HHHHHHHHHCCCCC--CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHH-CCCCC
T ss_conf 99999998584988--80139999899998316699999999999999873----9965999999999999995-65767
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-CCCEEEECCCCCCCCCC
Q ss_conf 99189987289977898831588999999999999971599489999999999998716688-98545403687653357
Q 003553 323 GGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGP-GGEIFSAEDADSAETEG 401 (811)
Q Consensus 323 gGGF~RYsvD~~W~vPHFEKMLyDNA~Ll~~ya~Ay~~t~d~~y~~~A~~t~~fl~r~l~~~-~Ggfysa~DADs~~~~~ 401 (811)
+|||+ ||+|++|.+|| ||||||||.++.+|++ |++|+++.|++.|+++++++.+.|+++ +||||++.|+|+.+
T Consensus 91 ~GG~~-~s~d~dg~~~~-~k~lyd~Af~i~al~~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~--- 164 (421)
T 2zbl_A 91 YGGWY-ACVNDQGVVDA-SKQGYQHFFALLGAAS-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQ--- 164 (421)
T ss_dssp TSSBC-SEEETTEEEEC-CEEHHHHHHHHHHHHH-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCS---
T ss_pred CCEEE-EEECCCCCCCC-CHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC---
T ss_conf 89089-88579998177-4309999999999999-998499148999999999999982147789855402677885---
Q ss_pred CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHH
Q ss_conf 55545772266327999998404599999882446799757888889988778962100247914789870999899999
Q 003553 402 ATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLN 481 (811)
Q Consensus 402 ~~~~~EG~yY~Wt~~Ei~~~L~~~~~l~~~~y~i~~~Gn~e~~~~~dp~~~f~g~nvL~~~~~~~~~a~~~g~~~~~~~~ 481 (811)
.|+
T Consensus 165 ----~~~------------------------------------------------------------------------- 167 (421)
T 2zbl_A 165 ----TED------------------------------------------------------------------------- 167 (421)
T ss_dssp ----BCS-------------------------------------------------------------------------
T ss_pred ----CCC-------------------------------------------------------------------------
T ss_conf ----456-------------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHH--HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999852217999988730003008999--999999999932332210136777899918999999999999998
Q 003553 482 ILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLV--ISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRR 559 (811)
Q Consensus 482 ~l~~~r~kL~~~R~~R~~P~~DdKiltsWNalm--I~ALa~A~~v~~d~~~~~~~~~~~~~~~~~~yl~~A~~~~~fl~~ 559 (811)
...||+.| +.+|+++++++++ ++|++.|.++.+++..
T Consensus 168 -------------------------~~~~n~~m~~~~al~~l~~~tgd----------------~~~~~~A~~~~~~~~~ 206 (421)
T 2zbl_A 168 -------------------------YRGGNANMHAVEAFLIVYDVTHD----------------KKWLDRALRIASVIIH 206 (421)
T ss_dssp -------------------------CEEHHHHHHHHHHHHHHHHTTCC----------------THHHHHHHHHHHHHCC
T ss_pred -------------------------CCCCCHHHHHHHHHHHHHHHHCC----------------HHHHHHHHHHHHHHHH
T ss_conf -------------------------67776799999999999985598----------------9999999999999999
Q ss_pred HCCCCCCCEEEEEECCCCCCCCCC-CCH-----------HHHH---HHHHHHHHHHC---CC--H-HHHHHHHHHHHHHH
Q ss_conf 545469993898723898788887-010-----------9999---99999999972---99--8-99999999999999
Q 003553 560 HLYDEQTHRLQHSFRNGPSKAPGF-LDD-----------YAFL---ISGLLDLYEFG---SG--T-KWLVWAIELQNTQD 618 (811)
Q Consensus 560 ~l~d~~~g~l~~~~~~g~~~~~~~-leD-----------YA~~---i~aLL~LyeaT---gd--~-~~L~~A~~L~~~~~ 618 (811)
++.++.+|++.+.++++.....++ ++| |++. ++.++++++++ ++ + .|++.|.++++.+.
T Consensus 207 ~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~ 286 (421)
T 2zbl_A 207 DVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATI 286 (421)
T ss_dssp CCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 84157998154333876565010157886666566899998699999999999987255565356899999999999999
Q ss_pred HHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8724457-9823335799996434456788999888289999999999998489986489999999999999999853
Q 003553 619 ELFLDRE-GGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDM 695 (811)
Q Consensus 619 ~~F~D~~-~Ggff~t~~~~~~l~~R~k~~~D~a~PS~Nsv~a~~LlrL~~lt~~~~~~~y~~~A~~~l~~~~~~i~~~ 695 (811)
+.+||++ .||+|.+...++.++.+.|.. ..|+.++.++++|+++|++ +.|.+.++++++.+...+...
T Consensus 287 ~~g~d~~~~GG~~~~~~~~g~~~~~~k~~------w~~aea~~all~l~~~tgd---~~yl~~a~~~~~~~~~~~~d~ 355 (421)
T 2zbl_A 287 RDAWAPDGADGFVYSVDWDGKPIVRERVR------WPIVEAMGTAYALYTLTDD---SQYEEWYQKWWDYCIKYLMDY 355 (421)
T ss_dssp HHHBSCSSSSSBCSCBCTTSCBSCCCEEH------HHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHTBCT
T ss_pred HHHCCCCCCCCEEEEECCCCCCCCCCCCC------HHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHCCCC
T ss_conf 97558788883798646898936777244------9999999999999988598---999999999999999748789
No 5
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=1.00 E-value=1 Score=224.37 Aligned_cols=313 Identities=16% Similarity=0.048 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999818983137991899872899778988315889999999999999715994899999999999987166
Q 003553 303 QKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMI 382 (811)
Q Consensus 303 ~~~~~~TL~~Ma~GGi~D~igGGF~RYsvD~~W~vPHFEKMLyDNA~Ll~~ya~Ay~~t~d~~y~~~A~~t~~fl~r~l~ 382 (811)
...+...|.=-. ....| .+|||+.+..++...+||+|||+++||+++++|+.||++++++.|+++|+++++||.+.|+
T Consensus 12 ~~~~~~~l~fw~-~~~~D-~~GGf~~~l~~dg~~~~~~~k~l~~n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~ 89 (402)
T 3gt5_A 12 RTHISDTMAFYH-PRCID-SAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHR 89 (402)
T ss_dssp HHHHHHHHHHHT-TTTBC-TTSSBCCEECTTSCEEESSEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHH-HCCCC-CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 999997998778-53788-9969114889999899987300999999999999999755986799999999999998580
Q ss_pred CCC-CCEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHH--HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 889-8545403687653357555457722663279999984045--9999988244679975788888998877896210
Q 003553 383 GPG-GEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEH--AILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVL 459 (811)
Q Consensus 383 ~~~-Ggfysa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~--~~l~~~~y~i~~~Gn~e~~~~~dp~~~f~g~nvL 459 (811)
+++ ||||+++ .|+.+.+..+.-+.-+|+++...+.. +.++. .+.+.+.+...
T Consensus 90 d~~~Gg~~~~~-~dG~~~~~~~~lyd~Af~i~al~~~~-~tgd~~~l~~A~~l~~~i----------------------- 144 (402)
T 3gt5_A 90 NPATGGYAWTL-CDDRVEDDTNHCYGLAFVMLAYSCGL-KVGIKQAREWMDETWCLL----------------------- 144 (402)
T ss_dssp CTTTSCBCSEE-ETTEEEECCEEHHHHHHHHHHHHHHH-HTTCTTHHHHHHHHHHHH-----------------------
T ss_pred CCCCCCEEEEE-ECCCCCCCCCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHH-----------------------
T ss_conf 47899379984-18987767735599999999999999-819966999999999999-----------------------
Q ss_pred ECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC--C--CCCC--CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0247914789870999899999999999999852217--9--9998--87300030089999999999999323322101
Q 003553 460 IELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSK--R--PRPH--LDDKVIVSWNGLVISSFARASKILKSEAESAM 533 (811)
Q Consensus 460 ~~~~~~~~~a~~~g~~~~~~~~~l~~~r~kL~~~R~~--R--~~P~--~DdKiltsWNalmI~ALa~A~~v~~d~~~~~~ 533 (811)
.+.+.+.... + ..|. +...-..+-|+.++.++.++++++++
T Consensus 145 ---------------------------~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd------ 191 (402)
T 3gt5_A 145 ---------------------------ERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGE------ 191 (402)
T ss_dssp ---------------------------HHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCC------
T ss_pred ---------------------------HHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC------
T ss_conf ---------------------------99836875797666528888888878778889999999999986198------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC-CCCCCC-----------CCCCCHHHHHHHH---HHHHH
Q ss_conf 36777899918999999999999998545469993898723-898788-----------8870109999999---99999
Q 003553 534 FNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFR-NGPSKA-----------PGFLDDYAFLISG---LLDLY 598 (811)
Q Consensus 534 ~~~~~~~~~~~~yl~~A~~~~~fl~~~l~d~~~g~l~~~~~-~g~~~~-----------~~~leDYA~~i~a---LL~Ly 598 (811)
++|++.|.++++.+..+++++++|.+...+. ++.+.. .+..-.+++.|++ |++++
T Consensus 192 ----------~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~ 261 (402)
T 3gt5_A 192 ----------QRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILD 261 (402)
T ss_dssp ----------HHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf ----------8999999999999999750756894677899988886544567854456768888874999999999999
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 97299899999999999999872445798233357999964344567889998882899999999999984899864899
Q 003553 599 EFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYR 678 (811)
Q Consensus 599 eaTgd~~~L~~A~~L~~~~~~~F~D~~~Ggff~t~~~~~~l~~R~k~~~D~a~PS~Nsv~a~~LlrL~~lt~~~~~~~y~ 678 (811)
++++++.+++.|.++++.+.+.+||++.||++.+...+..++.+.|. -..++.++.+++.|+++|++ +.|.
T Consensus 262 ~~~~~~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~------~W~qaEal~a~l~ly~~tgd---~~yl 332 (402)
T 3gt5_A 262 RYIEVEWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKY------FWVQAESLAAAALLATRSGD---ERYW 332 (402)
T ss_dssp HHCCCTTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEE------HHHHHHHHHHHHHHHHHHCC---HHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCC------EEHHHHHHHHHHHHHHHHCC---HHHH
T ss_conf 86186889999999999999956268999479988599995447836------63799999999999998697---9999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999985
Q 003553 679 QNAEHSLAVFETRLKD 694 (811)
Q Consensus 679 ~~A~~~l~~~~~~i~~ 694 (811)
+.++++.+.....+..
T Consensus 333 ~~a~~~~~~~~~~~~D 348 (402)
T 3gt5_A 333 QWYDRLWAYAWQHMVD 348 (402)
T ss_dssp HHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHHHHHCCC
T ss_conf 9999999999975848
No 6
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=1.00 E-value=1 Score=209.63 Aligned_cols=310 Identities=13% Similarity=0.009 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHH
Q ss_conf 999999999999818983137991899872899778988315889999999999999715---99489999999999998
Q 003553 302 GQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLT---KDVFYSYICRDILDYLR 378 (811)
Q Consensus 302 ~~~~~~~TL~~Ma~GGi~D~igGGF~RYsvD~~W~vPHFEKMLyDNA~Ll~~ya~Ay~~t---~d~~y~~~A~~t~~fl~ 378 (811)
........|.-.. ++++|+++|||++|..++...+| ++|||++||+++++|+.||+++ +++.|+++|+++++||.
T Consensus 15 l~~~~~~~l~~w~-~~~~D~~~GGf~~~~~~dg~~~~-~~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~ 92 (402)
T 1fp3_A 15 VGQELDRVMAFWL-EHSHDREHGGFFTCLGRDGRVYD-DLKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLL 92 (402)
T ss_dssp HHHHHHHHHHHHH-HHSBCTTTSSBCCCBCTTSCBSC-CCEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCCCCCCCCEEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999998763-04877899997668889999977-762014259999999999987523588899999999999999
Q ss_pred HHCCCCCC--CEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHH--HHHHHHHHCC-------CCCCCCCCCCCC
Q ss_conf 71668898--545403687653357555457722663279999984045--9999988244-------679975788888
Q 003553 379 RDMIGPGG--EIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEH--AILFKEHYYL-------KPTGNCDLSRMS 447 (811)
Q Consensus 379 r~l~~~~G--gfysa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~--~~l~~~~y~i-------~~~Gn~e~~~~~ 447 (811)
+.|++++| |||+++|+|+.+.+..+..+.++|++|...|+..++++. .+.+.+.+.. .+.|.+.
T Consensus 93 ~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~----- 167 (402)
T 1fp3_A 93 RHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGR----- 167 (402)
T ss_dssp HHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCC-----
T ss_pred HHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC-----
T ss_conf 963186889736999888998065661449999999999999988598999999999999999986149875567-----
Q ss_pred CCCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHH--HHHHHHH---HH
Q ss_conf 998877896210024791478987099989999999999999985221799998873000300899--9999999---99
Q 003553 448 DPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGL--VISSFAR---AS 522 (811)
Q Consensus 448 dp~~~f~g~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~kL~~~R~~R~~P~~DdKiltsWNal--mI~ALa~---A~ 522 (811)
.. .+ |...+.++|+. ++.+++. ++
T Consensus 168 -------~~------------------------------------------~~--~~~~~~~~~~~m~~~~~~l~l~~l~ 196 (402)
T 1fp3_A 168 -------PQ------------------------------------------LP--GAVASESMAVPMMLLCLVEQLGEED 196 (402)
T ss_dssp -------CC------------------------------------------CT--TSCCEEETHHHHHHHHHHHHHHTTC
T ss_pred -------CC------------------------------------------CC--CCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf -------65------------------------------------------66--7667788646899999999999998
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE-CCCCCCC--CCCCCHHHHHHH---HHHH
Q ss_conf 993233221013677789991899999999999999854546999389872-3898788--887010999999---9999
Q 003553 523 KILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSF-RNGPSKA--PGFLDDYAFLIS---GLLD 596 (811)
Q Consensus 523 ~v~~d~~~~~~~~~~~~~~~~~~yl~~A~~~~~fl~~~l~d~~~g~l~~~~-~~g~~~~--~~~leDYA~~i~---aLL~ 596 (811)
.++++ .|++.|.++.+.+..+ +++.+|++...+ .++.+.. .+....+++.|+ .|+.
T Consensus 197 ~~~~~-----------------~~~~~a~~~~~~~~~~-~~~~~~~~~e~~d~dw~~~~~~~g~~~~pgh~ie~~wlL~~ 258 (402)
T 1fp3_A 197 EELAG-----------------RYAQLGHWCARRILQH-VQRDGQAVLENVSEDGEELSGCLGRHQNPGHALEAGWFLLR 258 (402)
T ss_dssp HHHHH-----------------HTHHHHHHHHHHHHTT-EETTTTEECSEEETTSCBCCHHHHHEECHHHHHHHHHHHHH
T ss_pred HHCCC-----------------HHHHHHHHHHHHHHHH-HCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 73381-----------------7999999999999987-48579968888898877467888788898738899999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999729989999999999999-9872445798233357999964344567889-99888289999999999998489986
Q 003553 597 LYEFGSGTKWLVWAIELQNTQ-DELFLDREGGGYFNTTGEDPSVLLRVKEDHD-GAEPSGNSVSVINLVRLASIVAGSKS 674 (811)
Q Consensus 597 LyeaTgd~~~L~~A~~L~~~~-~~~F~D~~~Ggff~t~~~~~~l~~R~k~~~D-~a~PS~Nsv~a~~LlrL~~lt~~~~~ 674 (811)
++++++++.|++.|+++++.+ .++.||++.||++.+...+..++. ...| ...-.+++.++.+++.|+++|++
T Consensus 259 a~~~~~~~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~---~l~d~~~~~W~qaea~~a~l~ly~~tgd--- 332 (402)
T 1fp3_A 259 HSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPT---QLEWAMKLWWPHSEAMIAFLMGYSESGD--- 332 (402)
T ss_dssp HHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCS---STTTTCEEHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHHHHCC---
T ss_conf 9997499579999999999978997114789977874058999566---5768870728999999999999998699---
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 4899999999999999998
Q 003553 675 DYYRQNAEHSLAVFETRLK 693 (811)
Q Consensus 675 ~~y~~~A~~~l~~~~~~i~ 693 (811)
+.|++.|.++.+.+.....
T Consensus 333 ~~yl~~a~~~~~~~~~~f~ 351 (402)
T 1fp3_A 333 PALLRLFYQVAEYTFRQFR 351 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999997483
No 7
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=1.00 E-value=1 Score=195.69 Aligned_cols=249 Identities=10% Similarity=0.044 Sum_probs=186.8
Q ss_pred CCCCCCCCEEEEECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC-CCEEEECCCC
Q ss_conf 8313799189987289977-8988315889999999999999715994899999999999987166889-8545403687
Q 003553 318 IHDHVGGGFHRYSVDERWH-VPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPG-GEIFSAEDAD 395 (811)
Q Consensus 318 i~D~igGGF~RYsvD~~W~-vPHFEKMLyDNA~Ll~~ya~Ay~~t~d~~y~~~A~~t~~fl~r~l~~~~-Ggfysa~DAD 395 (811)
..|+. ||+ ++|.+|. +|++|||+++||+++++|+.||+ +|++.|+++|+++++||.+.|++++ ||||+++|+|
T Consensus 27 ~~d~~--GF~--~ld~~g~~~~~~~k~~~~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~d 101 (421)
T 2zbl_A 27 AVVPT--GFG--WLGNKGQIKEEMGTHLWITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQ 101 (421)
T ss_dssp GEETT--EEC--CBCTTSCBCGGGCEEHHHHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETT
T ss_pred CCCCC--CCC--EECCCCCCCCCCHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 84988--801--3999989999831669999999999999987-399659999999999999956576789089885799
Q ss_pred CCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCC
Q ss_conf 65335755545772266327999998404599999882446799757888889988778962100247914789870999
Q 003553 396 SAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMP 475 (811)
Q Consensus 396 s~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~l~~~~y~i~~~Gn~e~~~~~dp~~~f~g~nvL~~~~~~~~~a~~~g~~ 475 (811)
+.+.+
T Consensus 102 g~~~~--------------------------------------------------------------------------- 106 (421)
T 2zbl_A 102 GVVDA--------------------------------------------------------------------------- 106 (421)
T ss_dssp EEEEC---------------------------------------------------------------------------
T ss_pred CCCCC---------------------------------------------------------------------------
T ss_conf 98177---------------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 89999999999999985221799998873000300899999999999993233221013677789991899999999999
Q 003553 476 LEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAAS 555 (811)
Q Consensus 476 ~~~~~~~l~~~r~kL~~~R~~R~~P~~DdKiltsWNalmI~ALa~A~~v~~d~~~~~~~~~~~~~~~~~~yl~~A~~~~~ 555 (811)
+|. ..-|+++|.+++. |+++++ +++++.|.++.+
T Consensus 107 ----------------------------~k~-lyd~Af~i~al~~-~~~tg~----------------~~~l~~a~~~~~ 140 (421)
T 2zbl_A 107 ----------------------------SKQ-GYQHFFALLGAAS-AVTTGH----------------PEARKLLDYTIE 140 (421)
T ss_dssp ----------------------------CEE-HHHHHHHHHHHHH-HHTTTC----------------TTHHHHHHHHHH
T ss_pred ----------------------------CHH-HHHHHHHHHHHHH-HHHHCC----------------CCHHHHHHHHHH
T ss_conf ----------------------------430-9999999999999-998499----------------148999999999
Q ss_pred HHHHHCCCCCCCEEEEEE-CCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 999854546999389872-38987-8888701099999999999997299899999999999999872445798233357
Q 003553 556 FIRRHLYDEQTHRLQHSF-RNGPS-KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTT 633 (811)
Q Consensus 556 fl~~~l~d~~~g~l~~~~-~~g~~-~~~~~leDYA~~i~aLL~LyeaTgd~~~L~~A~~L~~~~~~~F~D~~~Ggff~t~ 633 (811)
++.++++|++.|+++.+. .++++ .....++.+++++.+++.+|++|++++|++.|.++.+.+..++.+..+|......
T Consensus 141 ~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f 220 (421)
T 2zbl_A 141 VIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHF 220 (421)
T ss_dssp HHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEE
T ss_pred HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC
T ss_conf 99998214778985540267788545667776799999999999985598999999999999999984157998154333
Q ss_pred CCCCCCCCCC-CC-CCC-----CCCCCHHHHHHHHHHHHHHHHCCCCC--H-HHHHHHHHHHHHHHHHH
Q ss_conf 9999643445-67-889-----99888289999999999998489986--4-89999999999999999
Q 003553 634 GEDPSVLLRV-KE-DHD-----GAEPSGNSVSVINLVRLASIVAGSKS--D-YYRQNAEHSLAVFETRL 692 (811)
Q Consensus 634 ~~~~~l~~R~-k~-~~D-----~a~PS~Nsv~a~~LlrL~~lt~~~~~--~-~y~~~A~~~l~~~~~~i 692 (811)
.++...+... .+ ..+ +..|...-.+++.|++++.++++..+ + .|.+.|.++........
T Consensus 221 ~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g 289 (421)
T 2zbl_A 221 DSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDA 289 (421)
T ss_dssp CTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 876565010157886666566899998699999999999987255565356899999999999999975
No 8
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=1.00 E-value=1 Score=185.46 Aligned_cols=254 Identities=13% Similarity=0.059 Sum_probs=188.2
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH-HHHHHHC
Q ss_conf 999824210135899877789999999999998189831379918998728997789883158899999999-9999971
Q 003553 282 MMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANV-YLDAFSL 360 (811)
Q Consensus 282 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~Ma~GGi~D~igGGF~RYsvD~~W~vPHFEKMLyDNA~Ll~~-ya~Ay~~ 360 (811)
.|...+..++ ++..++.+..-.+.+..+- -.++ ..+--|-+.+... |..+|++
T Consensus 76 ~lw~~ye~Tg-------d~~~~~~a~~~~~~l~~~~-~~~~------------------~~~~HD~GF~~~~s~~~~y~l 129 (397)
T 2zzr_A 76 CLWLAYEYNQ-------DKKLKNIAHKNVLSFLNRI-NNRI------------------ALDHHDLGFLYTPSCTAEYRI 129 (397)
T ss_dssp HHHHHHHHHC-------CHHHHHHHHHHHHHHHHHH-HTTC------------------SCCSSTHHHHHTTTHHHHHHH
T ss_pred HHHHHHHHHC-------CHHHHHHHHHHHHHHHHHH-HHCC------------------CCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999979-------9999999999999999864-3056------------------678777307889999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 59948999999999999871668898545403687653357555457722663279999984045999998824467997
Q 003553 361 TKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGN 440 (811)
Q Consensus 361 t~d~~y~~~A~~t~~fl~r~l~~~~Ggfysa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~l~~~~y~i~~~Gn 440 (811)
||++.|++++...+++|...+ +|.+||..+-+....+ +
T Consensus 130 tg~~~~~~~~~~aA~~L~~r~-~~~~g~iqsw~~~~~~-----------------------------------------~ 167 (397)
T 2zzr_A 130 NGDVKALEATIKAADKLMERY-QEKGGFIQAWGELGYK-----------------------------------------E 167 (397)
T ss_dssp HCCHHHHHHHHHHHHHHHTTE-ETTTTEECCSSSTTCG-----------------------------------------G
T ss_pred HCCHHHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCC-----------------------------------------C
T ss_conf 399999999999999999973-7578879851667888-----------------------------------------7
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHH
Q ss_conf 57888889988778962100247914789870999899999999999999852217999988730003008999999999
Q 003553 441 CDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFAR 520 (811)
Q Consensus 441 ~e~~~~~dp~~~f~g~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~kL~~~R~~R~~P~~DdKiltsWNalmI~ALa~ 520 (811)
++ +.++ .|.+.|.+|++
T Consensus 168 -------------~~--------------------------------------------~~iI------D~~mni~~L~~ 184 (397)
T 2zzr_A 168 -------------HY--------------------------------------------RLII------DCLLNIQLLFF 184 (397)
T ss_dssp -------------GC--------------------------------------------EEET------THHHHTHHHHH
T ss_pred -------------CC--------------------------------------------CEEE------CHHHHHHHHHH
T ss_conf -------------77--------------------------------------------4444------16868999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC----CCCCC----CCCCCCHH-----
Q ss_conf 999932332210136777899918999999999999998545469993898723----89878----88870109-----
Q 003553 521 ASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFR----NGPSK----APGFLDDY----- 587 (811)
Q Consensus 521 A~~v~~d~~~~~~~~~~~~~~~~~~yl~~A~~~~~fl~~~l~d~~~g~l~~~~~----~g~~~----~~~~leDY----- 587 (811)
|++++++ ++|++.|++.++++.++++++ +|+++|+++ +|++. ..|+++||
T Consensus 185 A~~~~gd----------------~~y~~~A~~ha~~~l~~~~r~-dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRG 247 (397)
T 2zzr_A 185 AYEQTGD----------------EKYRQVAVNHFYASANNVVRD-DSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARG 247 (397)
T ss_dssp HHHHHCC----------------HHHHHHHHHHHHHHHHHTBCT-TSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHH
T ss_pred HHHHHCC----------------HHHHHHHHHHHHHHHHHCCCC-CCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 9998698----------------999999999999999967378-99758998760899975548851654862146888
Q ss_pred -HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf -9999999999997299899999999999999872445798233357999964344567889998882899999999999
Q 003553 588 -AFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLA 666 (811)
Q Consensus 588 -A~~i~aLL~LyeaTgd~~~L~~A~~L~~~~~~~F~D~~~Ggff~t~~~~~~l~~R~k~~~D~a~PS~Nsv~a~~LlrL~ 666 (811)
|++|+|++++|++|+|++||+.|.++.+.++++|- .+++.||++..++ ++.++++ ||+||+++.+|++|+
T Consensus 248 qAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~-~d~~pywdt~~~~--~~~~~~D------~Sa~aiaA~~Ll~L~ 318 (397)
T 2zzr_A 248 QAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLP-EDKVSYWDLIFTD--GSGQPRD------TSATATAVCGIHEML 318 (397)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCC-TTSCCBSBTTCCT--TSCCCBC------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCC--CCCCCCC------CCHHHHHHHHHHHHH
T ss_conf 999999999999997989999999999999999658-7588663378877--7799389------889999999999999
Q ss_pred HHHCCCCCHH--HHHHHHHHHHHHHHHH
Q ss_conf 9848998648--9999999999999999
Q 003553 667 SIVAGSKSDY--YRQNAEHSLAVFETRL 692 (811)
Q Consensus 667 ~lt~~~~~~~--y~~~A~~~l~~~~~~i 692 (811)
+++++..... |++.|+++++.+.+..
T Consensus 319 ~~~~~~~~~~~~Y~~~A~~~l~~l~~~y 346 (397)
T 2zzr_A 319 KYLPEVDPDKETYKYAMHTMLRSLIEQY 346 (397)
T ss_dssp TTSCTTCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8608542036899999999999999988
No 9
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=1.00 E-value=1 Score=179.32 Aligned_cols=335 Identities=12% Similarity=0.027 Sum_probs=215.6
Q ss_pred HHHHHHHHH-HHHCCCCCCCC-C---CCCC-CCCH--HHH-HHH----HHHHHH-CCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999999-85012569999-9---9999-9973--599-999----982421-0135899877789999999999998
Q 003553 249 ALRLCAEQL-SKSYDSRFGGF-G---SAPK-FPRP--VEI-QMM----LYHSKK-LEDTGKSGEASEGQKMVLFTLQCMA 314 (811)
Q Consensus 249 ~~~~~~~~l-~~~~D~~~GGf-g---~aPK-FP~p--~~l-~~L----l~~~~~-~~~~~~~~~~~~~~~~~~~TL~~Ma 314 (811)
+.+.+...+ ...+|+ .||| . ...+ .|+. ... ..+ ...+.. + +++..++++..+++-+.
T Consensus 16 l~~~~l~fw~~~~~D~-~GGf~~~~~~d~~~~~~eK~l~~nar~i~~~a~a~~~~~-------~~~~~~~~A~~~~~~l~ 87 (388)
T 2gz6_A 16 LLNDVLPFWENHSLDS-EGGYFTCLDRQGKVYDTDKFIWLQNRQVWTFSMLCNQLE-------KRENWLKIARNGAKFLA 87 (388)
T ss_dssp HHHTHHHHHHHHCBCT-TSSBCCEEBTTSCEEECCEEHHHHHHHHHHHHHHHHHTC-------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC-CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHH
T ss_conf 9996999877538789-989876778998868864468999999999999998764-------99889999999999999
Q ss_pred HCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 18983137991899872899778988315889999999999999715994899999999999987166889854540368
Q 003553 315 KGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDA 394 (811)
Q Consensus 315 ~GGi~D~igGGF~RYsvD~~W~vPHFEKMLyDNA~Ll~~ya~Ay~~t~d~~y~~~A~~t~~fl~r~l~~~~Ggfysa~DA 394 (811)
+- ++|. +|||+. ++|++..+..-.|.+|+||.++.+++++|++|+++.|++.|+++++++++.+.+++ |++.....
T Consensus 88 ~~-~~~~-~Gg~~~-~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d~~-g~~~~~~~ 163 (388)
T 2gz6_A 88 QH-GRDD-EGNWYF-ALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDNPK-GKYTKTYP 163 (388)
T ss_dssp HH-SBCT-TSCBCS-EECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC--------------
T ss_pred HH-CCCC-CCCEEE-EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCC
T ss_conf 85-5888-999899-97589981667701099999999999999986989999999999999998833877-56475457
Q ss_pred CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCC
Q ss_conf 76533575554577226632799999840459999988244679975788888998877896210024791478987099
Q 003553 395 DSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGM 474 (811)
Q Consensus 395 Ds~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~l~~~~y~i~~~Gn~e~~~~~dp~~~f~g~nvL~~~~~~~~~a~~~g~ 474 (811)
+..+ ..| .+ ...+ -...+.+.|.++.+ ..+
T Consensus 164 ~~~~-------~~~------~~-~~~~---~~~all~l~~~t~d---------------------------~~~------ 193 (388)
T 2gz6_A 164 GTRP-------MKA------LA-VPMI---LANLTLEMEWLLPQ---------------------------ETL------ 193 (388)
T ss_dssp -CCC-------CEE------TH-HHHH---HHHHHHHTGGGSCH---------------------------HHH------
T ss_pred CCCC-------CCC------CC-HHHH---HHHHHHHHHHHCCC---------------------------HHH------
T ss_conf 8878-------888------77-7999---99999999997498---------------------------899------
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCC-----------CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 989999999999999985221799998-----------873000300899999999999993233221013677789991
Q 003553 475 PLEKYLNILGECRRKLFDVRSKRPRPH-----------LDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDR 543 (811)
Q Consensus 475 ~~~~~~~~l~~~r~kL~~~R~~R~~P~-----------~DdKiltsWNalmI~ALa~A~~v~~d~~~~~~~~~~~~~~~~ 543 (811)
.+...+.++.+.+++.+....+..++ .++-+.-+-|.-+++.|.++++++++
T Consensus 194 -~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd---------------- 256 (388)
T 2gz6_A 194 -ENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKND---------------- 256 (388)
T ss_dssp -HHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTC----------------
T ss_pred -HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC----------------
T ss_conf -999999999999987465899688898999897888665768888799999999999987598----------------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEE-ECCCCCC-----CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 89999999999999985454699938987-2389878-----88870109999999999999729989999999999999
Q 003553 544 KEYMEVAESAASFIRRHLYDEQTHRLQHS-FRNGPSK-----APGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQ 617 (811)
Q Consensus 544 ~~yl~~A~~~~~fl~~~l~d~~~g~l~~~-~~~g~~~-----~~~~leDYA~~i~aLL~LyeaTgd~~~L~~A~~L~~~~ 617 (811)
++|++.|+++++++.++.||++.|++++. ..+|.+. ..+....+|.++.|++.+|++|||++|+++|.++++.+
T Consensus 257 ~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~ 336 (388)
T 2gz6_A 257 SKTINQAVDVVLNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYS 336 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 78999999999999997146889987886358988266675777171899999999999998869799999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9872445798233357999964344567889998882899999999
Q 003553 618 DELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLV 663 (811)
Q Consensus 618 ~~~F~D~~~Ggff~t~~~~~~l~~R~k~~~D~a~PS~Nsv~a~~Ll 663 (811)
.++|.|+++|+||+.-..+..+..+.|. .-...|-++..++..++
T Consensus 337 ~~~~~D~~~G~w~~~l~~~g~~~~~~~~-~~~K~~YH~~~~~~~~~ 381 (388)
T 2gz6_A 337 WQHFADPEYGEWFGYLNRRGEVLLNLKG-GKWKGCFHVPRAMYLCW 381 (388)
T ss_dssp HHHHBCTTTSSBCCEECTTSCBSSCBSC-CSSCSSSHHHHHHHHHH
T ss_pred HHHCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCCHHHHHHHHH
T ss_conf 9749279998267754888699976788-88889864699999999
No 10
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=1.00 E-value=1 Score=173.98 Aligned_cols=337 Identities=12% Similarity=0.016 Sum_probs=221.1
Q ss_pred HHHHHHHHH-HHCCCCCCCCCC--------CCCCCCHHHHH-HHH----HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999999998-501256999999--------99999735999-999----8242101358998777899999999999981
Q 003553 250 LRLCAEQLS-KSYDSRFGGFGS--------APKFPRPVEIQ-MML----YHSKKLEDTGKSGEASEGQKMVLFTLQCMAK 315 (811)
Q Consensus 250 ~~~~~~~l~-~~~D~~~GGfg~--------aPKFP~p~~l~-~Ll----~~~~~~~~~~~~~~~~~~~~~~~~TL~~Ma~ 315 (811)
++.++..+. ...| ++|||-+ .|.++.-..++ .++ ..+... +++..++++.++++-|.+
T Consensus 15 ~~~~l~fw~~~~~D-~~GGf~~~l~~dg~~~~~~~k~l~~n~r~i~~~a~a~~~~-------g~~~~l~~A~~~~~fl~~ 86 (402)
T 3gt5_A 15 ISDTMAFYHPRCID-SAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQF-------GTAEYLDAVHHGLSYVRD 86 (402)
T ss_dssp HHHHHHHHTTTTBC-TTSSBCCEECTTSCEEESSEEEHHHHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCC-CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHH
T ss_conf 99799877853788-9969114889999899987300999999999999999755-------986799999999999998
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC-CEEEECCC
Q ss_conf 89831379918998728997789883158899999999999997159948999999999999871668898-54540368
Q 003553 316 GGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGG-EIFSAEDA 394 (811)
Q Consensus 316 GGi~D~igGGF~RYsvD~~W~vPHFEKMLyDNA~Ll~~ya~Ay~~t~d~~y~~~A~~t~~fl~r~l~~~~G-gfysa~DA 394 (811)
.++|..+|||++ ++ ++..+....|++||+|.++.++++ |..|+++.|++.|+++++++.+.++++++ +|+.+.+.
T Consensus 87 -~~~d~~~Gg~~~-~~-~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~ 162 (402)
T 3gt5_A 87 -VHRNPATGGYAW-TL-CDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADA 162 (402)
T ss_dssp -TTBCTTTSCBCS-EE-ETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECT
T ss_pred -HCCCCCCCCEEE-EE-ECCCCCCCCCCHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
T ss_conf -580478993799-84-189877677355999999999999-99819966999999999999998368757976665288
Q ss_pred CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCC
Q ss_conf 76533575554577226632799999840459999988244679975788888998877896210024791478987099
Q 003553 395 DSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGM 474 (811)
Q Consensus 395 Ds~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~l~~~~y~i~~~Gn~e~~~~~dp~~~f~g~nvL~~~~~~~~~a~~~g~ 474 (811)
|.. .. . +- +..- ... -.+.+.+.|.++.+. .+
T Consensus 163 ~~~-~~----~----~~--~~n~-~m~---l~eall~L~~~tgd~---------------------------~~------ 194 (402)
T 3gt5_A 163 QWN-FT----R----YR--GQNA-NMH---MCEAMLAAYEASGEQ---------------------------RY------ 194 (402)
T ss_dssp TCC-BC----S----CE--EHHH-HHH---HHHHHHHHHHHHCCH---------------------------HH------
T ss_pred CCC-CC----C----CC--CCCH-HHH---HHHHHHHHHHHHCCH---------------------------HH------
T ss_conf 888-88----8----78--7788-899---999999999861988---------------------------99------
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--C------------------HHHCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 989999999999999985221799998873--0------------------00300899999999999993233221013
Q 003553 475 PLEKYLNILGECRRKLFDVRSKRPRPHLDD--K------------------VIVSWNGLVISSFARASKILKSEAESAMF 534 (811)
Q Consensus 475 ~~~~~~~~l~~~r~kL~~~R~~R~~P~~Dd--K------------------iltsWNalmI~ALa~A~~v~~d~~~~~~~ 534 (811)
.+...+.++.+.+++.+....+..-+.|. + +.-+-+--..+.|.++++++++
T Consensus 195 -~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~------- 266 (402)
T 3gt5_A 195 -LERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEV------- 266 (402)
T ss_dssp -HHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCC-------
T ss_pred -HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-------
T ss_conf -999999999999975075689467789998888654456785445676888887499999999999986186-------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE-ECCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 67778999189999999999999985454699938987-238987-8888701099999999999997299899999999
Q 003553 535 NFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHS-FRNGPS-KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIE 612 (811)
Q Consensus 535 ~~~~~~~~~~~yl~~A~~~~~fl~~~l~d~~~g~l~~~-~~~g~~-~~~~~leDYA~~i~aLL~LyeaTgd~~~L~~A~~ 612 (811)
+++++.|++++++..++.||++.|+++.. ..+|.+ ...+.+.+++.+|.|++.||+.|||++|+++|.+
T Consensus 267 ---------~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~ 337 (402)
T 3gt5_A 267 ---------EWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDR 337 (402)
T ss_dssp ---------TTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf ---------88999999999999995626899947998859999544783663799999999999998697999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9999998724457982333579999643445678899988828999999999
Q 003553 613 LQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVR 664 (811)
Q Consensus 613 L~~~~~~~F~D~~~Ggff~t~~~~~~l~~R~k~~~D~a~PS~Nsv~a~~Llr 664 (811)
+++.+.++|.|++.|+||..-..+..++...|-. -+..|-++..++..+++
T Consensus 338 ~~~~~~~~~~D~~~G~W~~~l~~dg~~~~~~k~~-~~K~~YH~~~a~~e~~~ 388 (402)
T 3gt5_A 338 LWAYAWQHMVDHRYGAWYRLLDGDNRKYNDEKSP-AGKTDYHTMGACHEVLN 388 (402)
T ss_dssp HHHHHHHHTBCTTTCSBCSEECTTSCBCCSCCBC-TTCSSHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC-CCCCCCCHHHHHHHHHH
T ss_conf 9999997584899980787889888998877778-88998547899999999
Done!