BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003561
(811 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356512785|ref|XP_003525096.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Glycine max]
gi|27261142|gb|AAN87547.1|AF118784_1 ribonucleotide reductase large subunit A [Glycine max]
Length = 809
Score = 1547 bits (4005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/811 (90%), Positives = 775/811 (95%), Gaps = 2/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARIAVSNLHKNTKKSFSETIK MY H+NERS +KAPLIADD+
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSETIKVMYYHFNERSAMKAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEII+KNAA LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV++GIHK
Sbjct: 121 YEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSA++TYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIDSAVRTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEEHRARDLFYALWV DLFMERVQ+NGQWSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVSDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLYT YEREGKAKKVVQAQNLWFEIL SQIETGTPYMLFKDTCN+KSNQQNL
Sbjct: 361 DCWGEEFEKLYTQYEREGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPR+VREK VP+ESHPS++VGSRGSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSRGSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVTAIV NLNKIIDVNYYPV+TARRSN+RHRPIGIGVQGLADTFILLG+AF+S
Sbjct: 481 DFDKLGEVTAIVATNLNKIIDVNYYPVDTARRSNMRHRPIGIGVQGLADTFILLGVAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALKTSSE+AAKEGPYETY SP+SKGILQPDMW V+PS RWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKTSSELAAKEGPYETYSGSPISKGILQPDMWGVMPSSRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MI+K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALREMIAKTGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+WSPTIKN IIY+DGSVQKIPEIP++LK+IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPTIKNNIIYEDGSVQKIPEIPDDLKIIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLRSRAAADAIKFTVDTS+ EKP
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLHEKP 780
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
E DD TKMAQ+VCSLTNREEC+ACGS
Sbjct: 781 MAEE--EDDNTKMAQMVCSLTNREECLACGS 809
>gi|4151068|emb|CAA71816.1| ribonucleotide reductase [Nicotiana tabacum]
Length = 808
Score = 1540 bits (3987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/811 (90%), Positives = 778/811 (95%), Gaps = 3/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE VHFDKITARLKKLSYGLS EHCDPVLVSQKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVWKRDGRQETVHFDKITARLKKLSYGLSPEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA+T NHPDYASLAARIAVSNLHKNTKKSFSET+KDMYNH +ERSGLKAPLI+D++
Sbjct: 61 AETAAALTANHPDYASLAARIAVSNLHKNTKKSFSETVKDMYNHISERSGLKAPLISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLK+ G VVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKINGNVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAIKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMK+DSIEGIY+TLKECAV
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIR TGSYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRGTGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIFEFL+++KNHGKEEHRARDLFYALWVPDLFMERVQ+NGQWSLFCP+EA GLA
Sbjct: 301 LEPWHSDIFEFLDMRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG +FEKLYT YEREGKAKKVVQAQNLWFEIL SQIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGEDFEKLYTKYEREGKAKKVVQAQNLWFEILKSQIETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPR+VREK+VP ES PS++VGSRGSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVREKEVPDESQPSKLVGSRGSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLAEVTA+VT NLNKIIDVNYYPVETA+RSNLRHRPIG+GVQGLADTFILLGM+F+S
Sbjct: 481 DFAKLAEVTALVTTNLNKIIDVNYYPVETAKRSNLRHRPIGLGVQGLADTFILLGMSFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALK SSE+AAKEGPYETY SPVSKGILQPDMW V PSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASSELAAKEGPYETYAGSPVSKGILQPDMWGVTPSDRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GVLR MI+KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 GVLRGMIAKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+WSPT+KN+IIYDDGSVQKIPEIP++LK+IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNRIIYDDGSVQKIPEIPQDLKVIYKTVWEIKQRTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF WSRGLKTGMYYLRSRAAADAIKFTVDTS+ KEKP
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFHAWSRGLKTGMYYLRSRAAADAIKFTVDTSMLKEKP 780
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ VDD+TKMAQ+VCSL+NR+ECMACGS
Sbjct: 781 QT---AVDDDTKMAQMVCSLSNRDECMACGS 808
>gi|224096482|ref|XP_002310626.1| predicted protein [Populus trichocarpa]
gi|222853529|gb|EEE91076.1| predicted protein [Populus trichocarpa]
Length = 812
Score = 1528 bits (3955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 732/814 (89%), Positives = 773/814 (94%), Gaps = 5/814 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG+QEAVHFDKITARLKKLSYGLST+HCDPVLVSQKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSTDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARI VSNLHKNT KSFSETIK MYNH+NE+SGLKAPLIADD+
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTHKSFSETIKIMYNHFNEKSGLKAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV++GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSA+KTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIDSALKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEEHRARDLFYALWVPDLFMERVQ+NGQWSLFCP+EA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE+LYT YER+GKAKKVVQAQNLWFEIL SQIETGTPYMLFKDTCNRKSNQQNL
Sbjct: 361 DCWGKEFEELYTRYERDGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVRE VP+ESHPS++VGSRGS R+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREMGVPIESHPSKVVGSRGSNRRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT +VT NLNKIIDVNYYPVETARRSN RHRPIGIGVQGLAD F+LLGMAF+S
Sbjct: 481 DFEKLAEVTGVVTVNLNKIIDVNYYPVETARRSNFRHRPIGIGVQGLADAFMLLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ+LNKDIFETIYYHALK SSEIAA+EGPYETY SPVSKGILQPDMW V PS W+W
Sbjct: 541 PEAQKLNKDIFETIYYHALKASSEIAAREGPYETYVGSPVSKGILQPDMWGVTPSSLWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISKNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALREMISKNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+WSP +KNKIIY+DGSVQKIPEI ++LK IYKTVWEIKQ TLVDMAVDRGC+
Sbjct: 661 LHDLTEMGLWSPALKNKIIYEDGSVQKIPEISDDLKCIYKTVWEIKQKTLVDMAVDRGCF 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLRS+AAADAIKFTVDTSVFKEK
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSQAAADAIKFTVDTSVFKEK- 779
Query: 781 EKPEL---VVDDETKMAQVVCSLTNREECMACGS 811
KPEL D+TK+AQ+VCSLTNREECMACGS
Sbjct: 780 -KPELDDDAAADDTKIAQMVCSLTNREECMACGS 812
>gi|225438479|ref|XP_002278202.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Vitis vinifera]
gi|296082544|emb|CBI21549.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 1525 bits (3948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/811 (89%), Positives = 770/811 (94%), Gaps = 3/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE+VHFDKITARLKKLSYGLS +HCDPVLVSQKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQESVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFSETIK+MYNH+NERSGLKAPLIA D+
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKEMYNHFNERSGLKAPLIAADV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLK+QGKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAIKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEEHRARDLFYALWVPDLFMERVQ+NG WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGHWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EF LYT YEREGKAKKVVQAQNLWFE+L SQIETGTPYMLFKD+CN+KSNQQNL
Sbjct: 361 DCWGQEFVDLYTQYEREGKAKKVVQAQNLWFEVLKSQIETGTPYMLFKDSCNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTS ETAVCNLASIALPR+VREK VP+ES+PS++VGSRGSKNRFF
Sbjct: 421 GTIKSSNLCTEIIEYTSADETAVCNLASIALPRYVREKGVPMESNPSKLVGSRGSKNRFF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVTAIVT NLNKIIDVNYYPVETA+RSNLRHRPIG+GVQGLADTFILLGMAF+S
Sbjct: 481 DFDKLAEVTAIVTSNLNKIIDVNYYPVETAKRSNLRHRPIGLGVQGLADTFILLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALK S E+A +EGPYETY PVSKGILQPDMW V PS RWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASCELAMREGPYETYDGCPVSKGILQPDMWGVTPSSRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR MIS+NG+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALRKMISENGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+WSPT+KN+IIY++GSV K+ EIPE+LK+IY+TVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNQIIYENGSVLKMSEIPEDLKVIYRTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLRSRAAADAIKFTVDTS+ +E+
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSILQERT 780
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + DD+TKMAQ+VCSLTNREECMACGS
Sbjct: 781 KTAD---DDDTKMAQMVCSLTNREECMACGS 808
>gi|297821381|ref|XP_002878573.1| R1/RIBONUCLEOTIDE REDUCTASE, reductase protein R1 [Arabidopsis
lyrata subsp. lyrata]
gi|297324412|gb|EFH54832.1| R1/RIBONUCLEOTIDE REDUCTASE, reductase protein R1 [Arabidopsis
lyrata subsp. lyrata]
Length = 817
Score = 1523 bits (3944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/817 (87%), Positives = 772/817 (94%), Gaps = 6/817 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS++HCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARIAVSNLHKNTKKSFSETIKDM+NH N+RSGLK+PLIADD+
Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFNHVNDRSGLKSPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++IIM+NAA LDSEIIYDRDF+YDYFGFKTLERSYLLKVQG VVERPQHMLMRV++GIHK
Sbjct: 121 FDIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAI+TYH+MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV
Sbjct: 181 DDIDSAIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK-GAFAV 299
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK GAFAV
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKEGAFAV 300
Query: 300 YLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGL 359
YLEPWHAD+FEFL L+KNHGKEEHRARDLFYALWVPDLFMERVQ+NGQWSLFCPNEA GL
Sbjct: 301 YLEPWHADVFEFLELRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPNEAPGL 360
Query: 360 ADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
ADCWGAEFE LYT YEREGKAKKVVQAQ LW+EILTSQ+ETGTPYMLFKD+CNRKSNQQN
Sbjct: 361 ADCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQN 420
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK VP++SHPS++ GS GSKNR+
Sbjct: 421 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPSKLAGSLGSKNRY 480
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
FDF+KLAEVTA VT NLNKIIDVNYYPVETA+ SN+RHRPIGIGVQGLAD FILLGM F+
Sbjct: 481 FDFDKLAEVTATVTLNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFD 540
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
SPEAQQLNKDIFETIYYHALK SSE+AA+ GPYETY SPVSKGILQPDMWNVIPS+RWD
Sbjct: 541 SPEAQQLNKDIFETIYYHALKASSELAARVGPYETYSGSPVSKGILQPDMWNVIPSNRWD 600
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH
Sbjct: 601 WAVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 660
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LLHDLT+MG+W+PT+KNK+I ++GS+ + EIP++LK IY+TVWEIKQ T+VDMAVDRGC
Sbjct: 661 LLHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAVDRGC 720
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YIDQSQSLNIHMD+PNF K+TSLHF W++GLKTGMYYLRSRAAADAIKFTVDT++ KEK
Sbjct: 721 YIDQSQSLNIHMDKPNFAKLTSLHFYAWTKGLKTGMYYLRSRAAADAIKFTVDTAMLKEK 780
Query: 780 P-----EKPELVVDDETKMAQVVCSLTNREECMACGS 811
P +K D+ETK+AQ+VCSLTN ++C+ACGS
Sbjct: 781 PSVAEGDKEVEEEDNETKLAQMVCSLTNPDDCLACGS 817
>gi|4151066|emb|CAA71815.1| ribonucleotide reductase [Nicotiana tabacum]
Length = 808
Score = 1521 bits (3937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 721/811 (88%), Positives = 773/811 (95%), Gaps = 3/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQEAVHFDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSPDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYA LAARIAVSNLHK KKSFSETIKDMY H +ERSGLKAPL++D++
Sbjct: 61 AETAAAMTANHPDYACLAARIAVSNLHKTPKKSFSETIKDMYYHVSERSGLKAPLVSDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLK+QGKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+S IKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMK+DSIEGIY+TLKECAV
Sbjct: 181 DDIESVIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
L+PWHADIFEFL+L+KNHGKEEHRARDLFYALWVPDLFM+RVQ+NGQWSLFCPNEA GLA
Sbjct: 301 LDPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQSNGQWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG +FEKLY +YE+EGKAKKVVQAQNLWFEIL SQIETGTPYML+KDTCNRKSNQQNL
Sbjct: 361 DCWGEDFEKLYINYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSP ETAVCNLASIALPR+VREK VP ES PS++VGSRGSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPAETAVCNLASIALPRYVREKGVPSESQPSKLVGSRGSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVTA+VT NLNKIIDVNYYPVETA+RSNLRHRPIGIGVQGLADTF+LLGMAF+S
Sbjct: 481 DFDKLAEVTALVTTNLNKIIDVNYYPVETAKRSNLRHRPIGIGVQGLADTFMLLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQQLNKDIFETIYYHALK SSE+AAKEGPYETY SPVSKGI+QPDMW V PSD+WDW
Sbjct: 541 REAQQLNKDIFETIYYHALKASSELAAKEGPYETYAGSPVSKGIIQPDMWGVTPSDKWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MI+KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 VALREMITKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L+DLTEMG+WSP +KN+IIY+DGSVQKIPEIP+ELK IYK VWEIKQ TLVDMAVDRGCY
Sbjct: 661 LYDLTEMGLWSPALKNRIIYEDGSVQKIPEIPDELKEIYKNVWEIKQRTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF TWSRGLKTGMYYLRSRAAADAIKFTVDT++ KEKP
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFHTWSRGLKTGMYYLRSRAAADAIKFTVDTAMLKEKP 780
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ VDD+TKMAQ+VCSLTNRE+C++CGS
Sbjct: 781 KT---AVDDDTKMAQMVCSLTNREDCLSCGS 808
>gi|15227096|ref|NP_179770.1| ribonucleoside-diphosphate reductase subunit M1 [Arabidopsis
thaliana]
gi|56749666|sp|Q9SJ20.1|RIR1_ARATH RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase R1
subunit; Short=AtRNR1
gi|4417273|gb|AAD20398.1| putative ribonucleoside-diphosphate reductase large subunit
[Arabidopsis thaliana]
gi|14334814|gb|AAK59585.1| putative ribonucleoside-diphosphate reductase large subunit
[Arabidopsis thaliana]
gi|30793895|gb|AAP40400.1| putative ribonucleoside-diphosphate reductase large subunit
[Arabidopsis thaliana]
gi|330252128|gb|AEC07222.1| ribonucleoside-diphosphate reductase subunit M1 [Arabidopsis
thaliana]
Length = 816
Score = 1520 bits (3935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/816 (87%), Positives = 766/816 (93%), Gaps = 5/816 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS++HCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARIAVSNLHKNTKKSFSETIKDM+ H N+RSGLK+PLIADD+
Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+EIIM+NAA LDSEIIYDRDF+YDYFGFKTLERSYLLKVQG VVERPQHMLMRV++GIHK
Sbjct: 121 FEIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDS I+TYH+MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV
Sbjct: 181 DDIDSVIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD++EFL L+KNHGKEEHRARDLFYALW+PDLFMERVQ NGQWSLFCPNEA GLA
Sbjct: 301 LEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWGAEFE LYT YEREGKAKKVVQAQ LW+EILTSQ+ETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK VP++SHP ++ GS SKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPPKLAGSLDSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVTA VT NLNKIIDVNYYPVETA+ SN+RHRPIGIGVQGLAD FILLGM F+S
Sbjct: 481 DFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALK S+E+AA+ GPYETY SPVSKGILQPDMWNVIPSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 AVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLT+MG+W+PT+KNK+I ++GS+ + EIP++LK IY+TVWEIKQ T+VDMA DRGCY
Sbjct: 661 LHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAADRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMD+PNF K+TSLHF TW +GLKTGMYYLRSRAAADAIKFTVDT++ KEKP
Sbjct: 721 IDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVDTAMLKEKP 780
Query: 781 -----EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+K D+ETK+AQ+VCSLTN EEC+ACGS
Sbjct: 781 SVAEGDKEVEEEDNETKLAQMVCSLTNPEECLACGS 816
>gi|356509012|ref|XP_003523246.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Glycine max]
Length = 808
Score = 1520 bits (3935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 724/811 (89%), Positives = 768/811 (94%), Gaps = 3/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQEAVHFDKITARLKKLSYGLS +HCD VLVSQKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSADHCDAVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMTTNHPDYA LAARIAVSNLHKNTKKSFSETIK MY H++ERSGLKAPLIADD+
Sbjct: 61 AETAAAMTTNHPDYACLAARIAVSNLHKNTKKSFSETIKIMYYHFSERSGLKAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV++GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECA+
Sbjct: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAI 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+H+IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHDIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEEHRARDLFYALWVPDLFMERVQ+NGQWSLFCP+EA GLA
Sbjct: 301 LEPWHADMFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG +FE+LY YEREGKAKKVVQAQNLWFEIL SQIETGTPYMLFKDTCNRKSNQQNL
Sbjct: 361 DCWGEKFEELYHRYEREGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEY+SPTETAVCNLASIALPR+VREK VP+ESHPS++VGS GS NR+F
Sbjct: 421 GTIKSSNLCTEIIEYSSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSTGSGNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAE+TA+VT NLNK+IDVNYYPVE A+RSNLRHRPIGIGVQGLADTFILLGMAF+S
Sbjct: 481 DFDKLAEITALVTTNLNKVIDVNYYPVENAKRSNLRHRPIGIGVQGLADTFILLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLN++IFETIYYHALKTS ++AAKEGPYETY SP+SKGILQPDMW V PS+RWDW
Sbjct: 541 PEAQQLNQEIFETIYYHALKTSCDLAAKEGPYETYSGSPLSKGILQPDMWGVTPSNRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MIS NG RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALREMISSNGARNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+WSPT+KNKIIY+DGSVQKIPE+P LK IYKTVWEIKQ TLVDMA DRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEMPAVLKSIYKTVWEIKQRTLVDMAADRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLRSRAAADAIKFTVDTS K
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSALK--- 777
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
EK + DD TKMAQ+VCSLTNREEC+ACGS
Sbjct: 778 EKSNVEYDDNTKMAQMVCSLTNREECLACGS 808
>gi|3661603|gb|AAC61773.1| ribonucleoside-diphosphate reductase large subunit [Arabidopsis
thaliana]
Length = 816
Score = 1518 bits (3929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/816 (86%), Positives = 765/816 (93%), Gaps = 5/816 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS++HCDP+LV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPILVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARIAVSNLHKNTKKSFSETIKDM+ H N+RSGLK+PLIADD+
Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+EIIM+NAA LDSEIIYDRDF+YDYFGFKTLERSYLLKVQG VVERPQHMLMRV++GIHK
Sbjct: 121 FEIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDS I+TYH+MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY TLKECAV
Sbjct: 181 DDIDSVIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYGTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD++EFL L+KNHGKEEHRARDLFYALW+PDLFMERVQ NGQWSLFCPNEA GLA
Sbjct: 301 LEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWGAEFE LYT YEREGKAKKVVQAQ LW+EILTSQ+ETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK VP++SHP ++ GS SKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPPKLAGSLDSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVTA VT NLNKIIDVNYYPVETA+ SN+RHRPIGIGVQGLAD FILLGM F+S
Sbjct: 481 DFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALK S+E+AA+ GPYETY SPVSKGILQPDMWNVIPSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 AVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLT+MG+W+PT+KNK+I ++GS+ + EIP++LK IY+TVWEIKQ T+VDMA DRGCY
Sbjct: 661 LHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAADRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMD+PNF K+TSLHF TW +GLKTGMYYLRSRAAADAIKFTVDT++ KEKP
Sbjct: 721 IDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVDTAMLKEKP 780
Query: 781 -----EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+K D+ETK+AQ+VCSLTN EEC+ACGS
Sbjct: 781 SVAEGDKEVEEEDNETKLAQMVCSLTNPEECLACGS 816
>gi|40850562|gb|AAR95994.1| putative ribonucleotide reductase large subunit [Musa acuminata]
Length = 810
Score = 1513 bits (3917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 724/811 (89%), Positives = 760/811 (93%), Gaps = 1/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR EAVHFDKITARLKKLSYGL+ EHCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRPEAVHFDKITARLKKLSYGLTQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFSETIK MY+H+NERSG +APLIADD+
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKLMYHHFNERSGQEAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLKV G VVERPQHMLMRV++GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVSGMVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI S I+TYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMK+DSIEGIY+TLKECA+
Sbjct: 181 DDIKSVIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKEDSIEGIYDTLKECAI 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD++EFL L+KNHGKEEHRARDLFYALW+PDLFMERVQ+NGQWSLFCPNEA GLA
Sbjct: 301 LEPWHADMYEFLELRKNHGKEEHRARDLFYALWIPDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLY YE EGKAKKVV AQNLWFEIL SQIETGTPYMLFKDTCNRKSNQQNL
Sbjct: 361 DCWGDEFEKLYLKYEDEGKAKKVVAAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK VP+ESHPSR+VGS GSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLESHPSRLVGSSGSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVTAI+TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFDKLGEVTAIITENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALK+SSEIA GPYETY SPVSKGILQPDMWNV SDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKSSSEIAISSGPYETYQGSPVSKGILQPDMWNVTLSDRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISKNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 AALREMISKNGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+WSP +KNKIIY+DGSV KIPEIP+ LK IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPALKNKIIYEDGSVLKIPEIPDNLKAIYKTVWEIKQRTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLRSRAAADAIKFTVDTS+ +K
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSLL-QKT 779
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
KP D E KMAQVVCSL NREECMACGS
Sbjct: 780 TKPVEDDDVEAKMAQVVCSLENREECMACGS 810
>gi|224083844|ref|XP_002307143.1| predicted protein [Populus trichocarpa]
gi|222856592|gb|EEE94139.1| predicted protein [Populus trichocarpa]
Length = 817
Score = 1511 bits (3912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 726/817 (88%), Positives = 768/817 (94%), Gaps = 6/817 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS +HCDPVLVSQKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARI VSNLHKNT+KSFSETIK MYNH+N++SGLKA LIADDI
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTQKSFSETIKIMYNHFNDKSGLKAALIADDI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKN+A LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV++GIHK
Sbjct: 121 YEIIMKNSARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAIKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSAHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE+RARDLFYALWVPDLFMERVQ+NGQWSLFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEENRARDLFYALWVPDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE+LYT YER GKAKKVVQAQNLWFEIL SQIETGTPYMLFKDTCNRKSNQQNL
Sbjct: 361 DCWGKEFEELYTRYERNGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVRE VPVESHPS++VGSRG K+R+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREMGVPVESHPSKLVGSRGFKSRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT +VT NLNKIIDVNYYPVETARRSN RHRPIGIGVQGLADTFILLGM+F+S
Sbjct: 481 DFEKLAEVTGVVTSNLNKIIDVNYYPVETARRSNFRHRPIGIGVQGLADTFILLGMSFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD-RWD 599
PEAQ+LNKDIFETIYYHALK SSEIAA+EGPYETY SPVSKGILQPDMW V PS+ WD
Sbjct: 541 PEAQKLNKDIFETIYYHALKASSEIAAREGPYETYEGSPVSKGILQPDMWGVTPSNLLWD 600
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+MISKNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH
Sbjct: 601 WDALREMISKNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 660
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LLHDLTEMG+WSP +KNKIIY+DGSVQ IPEIP +LK IYKTVWEIKQ TLVDMAVDRGC
Sbjct: 661 LLHDLTEMGLWSPALKNKIIYEDGSVQNIPEIPNDLKFIYKTVWEIKQKTLVDMAVDRGC 720
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YIDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLRSRAAADAIKFTVDTSV ++K
Sbjct: 721 YIDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSVLQDK 780
Query: 780 PEKPE-----LVVDDETKMAQVVCSLTNREECMACGS 811
K + DD+TKMAQ+VCSL NR++C+ACGS
Sbjct: 781 KLKSDGAAAAAADDDDTKMAQMVCSLANRDDCLACGS 817
>gi|351722146|ref|NP_001236466.1| ribonucleotide reductase large subunit B [Glycine max]
gi|27261144|gb|AAN87548.1|AF118785_1 ribonucleotide reductase large subunit B [Glycine max]
Length = 808
Score = 1507 bits (3901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/811 (88%), Positives = 765/811 (94%), Gaps = 3/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKR+GRQE VHFDKITARLKKLSYGLS++HCD VLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRNGRQETVHFDKITARLKKLSYGLSSDHCDAVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYA LAARIAVSNLHKNTKKSFSETIK MY H+NERSGLKAPLIADD+
Sbjct: 61 AETAAAMTANHPDYACLAARIAVSNLHKNTKKSFSETIKIMYYHFNERSGLKAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLKVQG+V+ERPQHMLMRV++GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGQVLERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSA+KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECA+
Sbjct: 181 DDIDSAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAI 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+H+IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHDIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEEHRARDLFYALWVPDLFMERVQ+NGQWSLFCP+EA GL
Sbjct: 301 LEPWHADMFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLT 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG +FE+LY YEREGKA KVVQAQ+LWFEIL SQIETGTPYMLFKDTCNRKSNQQNL
Sbjct: 361 DCWGEKFEELYLQYEREGKAMKVVQAQSLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEY+SPTETAVCNLASIALPR+VREK VP+ESHPS++VGS S NR+F
Sbjct: 421 GTIKSSNLCTEIIEYSSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSTCSGNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAE+TA+VT NLNK+IDVNYYPVE A+RSNLRHRPIGIGVQGLADTFILLGMAF+S
Sbjct: 481 DFDKLAEITALVTTNLNKVIDVNYYPVENAKRSNLRHRPIGIGVQGLADTFILLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNK+IFETIYYHALKTS +AAKEGPYETY SP+SKGILQPDMW V PS+RWDW
Sbjct: 541 PEAQQLNKEIFETIYYHALKTSCGLAAKEGPYETYSGSPISKGILQPDMWGVAPSNRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+WSPT+KNKIIY+DGSVQKIPEIP +LK IYKTVWEIKQ TLVDMA DRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEIPADLKNIYKTVWEIKQRTLVDMAADRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSL F WS+GLKTGMYYLRSRAAADAIKFTVDTS +EK
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLQFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSALREKS 780
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ DD TKMAQ+VCSLTNR+EC+ACGS
Sbjct: 781 NVED---DDNTKMAQMVCSLTNRDECLACGS 808
>gi|357519755|ref|XP_003630166.1| Ribonucleoside-diphosphate reductase [Medicago truncatula]
gi|355524188|gb|AET04642.1| Ribonucleoside-diphosphate reductase [Medicago truncatula]
Length = 819
Score = 1494 bits (3867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/819 (86%), Positives = 759/819 (92%), Gaps = 8/819 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT NHPDYASLAARIAVSNLHKNT KSFSET+K MYNH+N RSG KAPLIADD+
Sbjct: 61 AETAAGMTANHPDYASLAARIAVSNLHKNTLKSFSETVKVMYNHFNHRSGKKAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEII+KNAA LDSEIIYDRDFDYDYFGFKTLERSYLLKVQG VVERPQHM+MRVS+GIHK
Sbjct: 121 YEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGVVVERPQHMIMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++SA+KTYH MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMK+DSIEGIY+TLKECAV
Sbjct: 181 DDVESAVKTYHFMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRA GSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRAHGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL LK NHGKEE RARDLFYALWVPDLFMERVQ+NG+WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLELKINHGKEEQRARDLFYALWVPDLFMERVQSNGEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG E++KLYT YE+ GKAKK+VQAQ+LWF IL SQIETG PYMLFKD CNRKSNQQNL
Sbjct: 361 DCWGEEYDKLYTQYEKAGKAKKIVQAQSLWFAILKSQIETGNPYMLFKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPR+VR+K +PVESH S++VGSRGS +R+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVRDKGLPVESHQSKLVGSRGSSSRYF 480
Query: 481 DFEKLAEV-------TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
DFEKL EV TA+VT NLNKIIDVNYYPVETA RSNLRHRPIGIGVQGLADTFIL
Sbjct: 481 DFEKLGEVHLLLTTVTAVVTTNLNKIIDVNYYPVETAERSNLRHRPIGIGVQGLADTFIL 540
Query: 534 LGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVI 593
LGMAF+SPEAQQLNKDIFETIYYHALKTS E+AAKEGPYETY SPVSKGILQPDMW V
Sbjct: 541 LGMAFDSPEAQQLNKDIFETIYYHALKTSCELAAKEGPYETYSGSPVSKGILQPDMWGVT 600
Query: 594 PSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEF 653
PS+ WDWG LR+MISK GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF
Sbjct: 601 PSNLWDWGALREMISKTGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEF 660
Query: 654 VVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDM 713
VVVNKHLLHDLTEMG+W+P +KNKIIYD+GSVQ + EIP ELK+IYKTVWEIKQ LVDM
Sbjct: 661 VVVNKHLLHDLTEMGLWNPALKNKIIYDNGSVQNLSEIPAELKVIYKTVWEIKQKILVDM 720
Query: 714 AVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT 773
AVDRGCYIDQSQSLNIHMD+PNF K+TSLHF WS+GLKTGMYYLR+RAA+DAIKFTVDT
Sbjct: 721 AVDRGCYIDQSQSLNIHMDKPNFGKLTSLHFYAWSKGLKTGMYYLRTRAASDAIKFTVDT 780
Query: 774 SVFKEKPEKPEL-VVDDETKMAQVVCSLTNREECMACGS 811
S K++P+ E DD+TKMAQ+VCSLTNR+EC ACGS
Sbjct: 781 SAIKDQPKVKEADDEDDDTKMAQMVCSLTNRDECEACGS 819
>gi|218201671|gb|EEC84098.1| hypothetical protein OsI_30411 [Oryza sativa Indica Group]
Length = 814
Score = 1492 bits (3862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/814 (86%), Positives = 761/814 (93%), Gaps = 3/814 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS EHCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT +HPDYASLAARIAVSNLHKNTKKSFSETIKDMY H+NERSGL APL+A D+
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+IMKNA+ LDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAIKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEEHRARDLFYALWVPDLFM+RVQ N +WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLYT YEREGKAKK+V AQ LWF+IL +QIETGTPYML+KDTCNRKSNQQNL
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK VP+ESHPS++VGS SKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT+ VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIY+H+LK S+E+A KEGPYETY SPVSKGILQPDMWNV+PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+W+P +KNKII++DGSVQK+ EIP++LK IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGVWTPALKNKIIFEDGSVQKMTEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLN+HM+QPNF K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT++ K
Sbjct: 721 IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG 780
Query: 781 E---KPELVVDDETKMAQVVCSLTNREECMACGS 811
E K D E KMAQ+VCSL NREEC+ACGS
Sbjct: 781 ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS 814
>gi|115466654|ref|NP_001056926.1| Os06g0168600 [Oryza sativa Japonica Group]
gi|55296056|dbj|BAD67618.1| putative ribonucleotide reductase [Oryza sativa Japonica Group]
gi|55296229|dbj|BAD67970.1| putative ribonucleotide reductase [Oryza sativa Japonica Group]
gi|113594966|dbj|BAF18840.1| Os06g0168600 [Oryza sativa Japonica Group]
gi|222635036|gb|EEE65168.1| hypothetical protein OsJ_20270 [Oryza sativa Japonica Group]
Length = 814
Score = 1490 bits (3857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/814 (86%), Positives = 760/814 (93%), Gaps = 3/814 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS EHCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT +HPDYASLAARIAVSNLHKNTKKSFSETIKDMY H+NERSGL APL+A D+
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+IMKNA+ LDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAIKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEEHRARDLFYALWVPDLFM+RVQ N +WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLYT YEREGKAKK+V AQ LWF+IL +QIETGTPYML+KDTCNRKSNQQNL
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK VP+ESHPS++VGS SKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT+ VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIY+H+LK S+E+A KEGPYETY SPVSKGILQPDMWNV+PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+W+P +KNKIIY+DGSVQK+ IP++LK IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGVWTPALKNKIIYEDGSVQKMTVIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLN+HM+QPNF K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT++ K
Sbjct: 721 IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG 780
Query: 781 E---KPELVVDDETKMAQVVCSLTNREECMACGS 811
E K D E KMAQ+VCSL NREEC+ACGS
Sbjct: 781 ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS 814
>gi|186920362|gb|ACC95434.1| ribonucleotide diphosphate reductase large subunit 1 [Oryza sativa
Japonica Group]
Length = 814
Score = 1486 bits (3848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/814 (86%), Positives = 759/814 (93%), Gaps = 3/814 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS EHCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT +HPDYASLAARIAVSNLHKNTKKSFSETIKDMY H+NERSGL APL+A D+
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+IMKNA+ LDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAIKTYH+MSQRWFTHASPTLFNAGT RPQLSSCFL+CMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTTRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEEHRARDLFYALWVPDLFM+RVQ N +WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLYT YEREGKAKK+V AQ LWF+IL +QIETGTPYML+KDTCNRKSNQQNL
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK VP+ESHPS++VGS SKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT+ VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIY+H+LK S+E+A KEGPYETY SPVSKGILQPDMWNV+PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+W+P +KNKIIY+DGSVQK+ IP++LK IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGVWTPALKNKIIYEDGSVQKMTVIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLN+HM+QPNF K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT++ K
Sbjct: 721 IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG 780
Query: 781 E---KPELVVDDETKMAQVVCSLTNREECMACGS 811
E K D E KMAQ+VCSL NREEC+ACGS
Sbjct: 781 ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS 814
>gi|326502586|dbj|BAJ95356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 812
Score = 1484 bits (3841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 701/812 (86%), Positives = 759/812 (93%), Gaps = 1/812 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQEAVHFDKITARLKKL+YGLS +HCDPVLV+QKVCAGVY+GVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLAYGLSQDHCDPVLVAQKVCAGVYRGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT +HPDYASLAARIAVSNLHKNT KSFSET+K MY H+NERSGL APLIADD+
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTMKSFSETVKVMYTHFNERSGLMAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNA LDSEIIYDRDFDYD+FGFKTLERSYLLKV GKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNATRLDSEIIYDRDFDYDFFGFKTLERSYLLKVGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SA+KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY+TL ECA
Sbjct: 181 DDIESAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLSECAS 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI+EFL+L+KNHGKEE+RARDLFYALW+PDLFMERVQ N QWSLFCP+EA GLA
Sbjct: 301 LEPWHADIYEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQKNEQWSLFCPSEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EF+ LY YEREGKAKK+V AQ+LWFEIL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGDEFQNLYNKYEREGKAKKIVSAQSLWFEILKAQIETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+E+TSPTETAVCNLASIALPRFVREK VP+ESHP+++VGS GSKNR+F
Sbjct: 421 GTIKSSNLCTEIVEFTSPTETAVCNLASIALPRFVREKGVPIESHPAKLVGSIGSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAE+T++VT NLNKIID+NYYP+ETARRSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFDKLAEITSVVTWNLNKIIDINYYPIETARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALK S+EIAAKEGPYETY PVSKGILQPDMWNV+PSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASAEIAAKEGPYETYDGCPVSKGILQPDMWNVVPSDRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+R MISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PAIRGMISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMGIWSP +KN IIYDDGSVQKI EIP++LK IYKTVWEIKQ T+VDMAVDRGCY
Sbjct: 661 LHDLTEMGIWSPVLKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-K 779
IDQSQSLNIHMDQ N K+TSLHF TWS+GLKTGMYYLR+RAAADAIKFTVDTS+ K+ K
Sbjct: 721 IDQSQSLNIHMDQANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKK 780
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
P E D E KMAQV CSL NRE+C+ACGS
Sbjct: 781 PANAEEEEDLEAKMAQVTCSLNNREDCLACGS 812
>gi|242094852|ref|XP_002437916.1| hypothetical protein SORBIDRAFT_10g004780 [Sorghum bicolor]
gi|241916139|gb|EER89283.1| hypothetical protein SORBIDRAFT_10g004780 [Sorghum bicolor]
Length = 815
Score = 1483 bits (3840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/819 (86%), Positives = 763/819 (93%), Gaps = 12/819 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT +HPDYASLAARIAVSNLHKNTKKSFSETIKDMY H+NERSGL APL+A+D+
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYMHFNERSGLMAPLVAEDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAI+TYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIYETLKECAV
Sbjct: 181 EDIESAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE+RARDLFYALWVPDLFM+RVQ NG+WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQRVQNNGEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EF+ LY YE +GKAKKVV AQ LWF+IL +QIETGTPYML+KDTCNRKSNQQNL
Sbjct: 361 DCWGEEFDNLYKKYESQGKAKKVVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIE+TSP ETAVCNLASIALPRFVREK VP+ESHPS++VGS SKNR+F
Sbjct: 421 GTIKSSNLCTEIIEFTSPNETAVCNLASIALPRFVREKGVPLESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT+ VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFEKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYH+LK S+E+AAKEGPYETY SPVSKGILQPDMW+V+PS+RW+W
Sbjct: 541 PEAQQLNKDIFETIYYHSLKASAELAAKEGPYETYEGSPVSKGILQPDMWDVVPSNRWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRETISKVGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMGIW+PT+KN+IIYDDGSVQKI EIP++LK IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGIWTPTLKNQIIYDDGSVQKIAEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQSLN+HM+Q NF K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT++ KE
Sbjct: 721 IDQSQSLNVHMEQANFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKENG 780
Query: 779 ------KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
KP + D E KMAQ+VCSL NREECMACGS
Sbjct: 781 NVVSNGKPTEE----DVEAKMAQMVCSLNNREECMACGS 815
>gi|449448442|ref|XP_004141975.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Cucumis sativus]
gi|449497699|ref|XP_004160484.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Cucumis sativus]
Length = 807
Score = 1483 bits (3838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/811 (86%), Positives = 757/811 (93%), Gaps = 4/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQEAVHFDKITARLKKLSYGLS +HCDPVLVSQKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARIAVSNLHKNTKKSFS+TI+DMY H +ERSG KA LIADD+
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSDTIRDMYYHVSERSGQKAALIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+IMKNAA LDSEIIYDRDFDYD+FGFKTLERSYLLKVQGKVVERPQHMLMRV++GIHK
Sbjct: 121 YEVIMKNAARLDSEIIYDRDFDYDFFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAIKTYH MSQRWFTHASPTLFN+GTPRPQLSSCFL+CMK+DSIEGIY+TLKECAV
Sbjct: 181 DDIDSAIKTYHTMSQRWFTHASPTLFNSGTPRPQLSSCFLICMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRA GSYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHNIRAMGSYIRGTNGTSNGILPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEEHRARDLFYALWVPDLFM+RVQ+NG+WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQSNGEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLY YE++GKAKKVV+AQNLWFEIL SQIETGTPYMLFKDTCNRKSNQQNL
Sbjct: 361 DCWGEEFEKLYIGYEQQGKAKKVVKAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEY+SPTETAVCNL+SIALPRFVREK V +ESHPS++VGSR SKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYSSPTETAVCNLSSIALPRFVREKGVSIESHPSKLVGSRDSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAE+TA+VT NLNKIIDVNYYPVETA+RSNLRHRPIGIGVQGLADTFILLGM+F+S
Sbjct: 481 DFDKLAEITALVTTNLNKIIDVNYYPVETAKRSNLRHRPIGIGVQGLADTFILLGMSFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFE IYYHALK S E+AA EGPYETY SPVSKGILQ DMW V PS RWDW
Sbjct: 541 PEAQQLNKDIFEAIYYHALKASCELAAVEGPYETYAGSPVSKGILQFDMWGVTPSKRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 EGLRAQIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLT+MG+W P +KNKIIY +GSVQ I EIP++L+ IYKTVWEIKQ TLVDMA DRGCY
Sbjct: 661 LHDLTDMGLWCPALKNKIIYANGSVQNIAEIPDDLRAIYKTVWEIKQKTLVDMAADRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLRS+AAADAIKFTVD S+ KEK
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSQAAADAIKFTVDPSLLKEKS 780
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
DD TKMAQ+VCSLTNRE+CMACGS
Sbjct: 781 NSE----DDSTKMAQMVCSLTNREDCMACGS 807
>gi|413953007|gb|AFW85656.1| hypothetical protein ZEAMMB73_966032 [Zea mays]
Length = 815
Score = 1480 bits (3832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/819 (85%), Positives = 764/819 (93%), Gaps = 12/819 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT +HPDYASLAARIAVSNLHKNTKKSFSETIKDMY H+N+RSGL APL+A+D+
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYMHFNKRSGLMAPLVAEDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLDGKVVERPQHMLMRVSLGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAI+TYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIYETLKECAV
Sbjct: 181 EDIESAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNG+SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGSSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE+RARDLFYALWVPDLFM+RVQ NG+WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQRVQNNGEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EF+ LY YE +GKAKKVV AQ LWF+IL +QIETGTPYML+KDTCNRKSNQQNL
Sbjct: 361 DSWGEEFDNLYKKYESQGKAKKVVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIE+TSPTETAVCNLASIALPRFVREKDVP+ESHPS++VGS SKNR+F
Sbjct: 421 GTIKSSNLCTEIIEFTSPTETAVCNLASIALPRFVREKDVPLESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT+ VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFEKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALK S+E+AAKEGPYETY SPVSKGILQPDMW+V+PS+RW+W
Sbjct: 541 PEAQQLNKDIFETIYYHALKASAELAAKEGPYETYEGSPVSKGILQPDMWDVVPSNRWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRETISKVGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMGIW+PT+KN+IIYDDGSVQKI EIP++LK IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGIWTPTLKNQIIYDDGSVQKIAEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQSLN+HM+Q NF K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT++ KE
Sbjct: 721 IDQSQSLNVHMEQANFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKENG 780
Query: 779 ------KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
KP + D + KMAQ+VCSL NREEC+ACGS
Sbjct: 781 NGVSDGKPAEE----DVDAKMAQMVCSLNNREECLACGS 815
>gi|147775539|emb|CAN71697.1| hypothetical protein VITISV_003192 [Vitis vinifera]
Length = 791
Score = 1476 bits (3820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/811 (87%), Positives = 751/811 (92%), Gaps = 20/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE+VHFDKITARLKKLSYGLS +HCDPVLVSQKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQESVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFSETIK+MYNH+NERSGLKAPLIA D+
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKEMYNHFNERSGLKAPLIAADV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLK+QGKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAIKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEEHRARDLFYALWVPDLFMERVQ+NG WSLFCP EA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGHWSLFCPXEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EF LYT YEREGKAKKVVQAQNLWFE+L SQIETGTPYMLFKD+CN+KSNQQNL
Sbjct: 361 DCWGQEFVDLYTQYEREGKAKKVVQAQNLWFEVLKSQIETGTPYMLFKDSCNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTS ETAVCNLASIALPR+VREK VP+ES+PS++VGSRGSKNRFF
Sbjct: 421 GTIKSSNLCTEIIEYTSADETAVCNLASIALPRYVREKGVPMESNPSKLVGSRGSKNRFF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVTAIVT NLNKIIDVNYYP QGLADTFILLGMAF+S
Sbjct: 481 DFDKLAEVTAIVTSNLNKIIDVNYYP-----------------FQGLADTFILLGMAFDS 523
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALK S E+A +EGPYETY PVSKGILQPDMW V PS RWDW
Sbjct: 524 PEAQQLNKDIFETIYYHALKASCELAMREGPYETYDGCPVSKGILQPDMWGVTPSSRWDW 583
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR MIS+NG+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 584 DALRKMISENGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 643
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+WSPT+KN+IIY++GSV K+ EIPE+LK+IY+TVWEIKQ TLVDMAVDRGCY
Sbjct: 644 LHDLTEMGLWSPTLKNQIIYENGSVLKMSEIPEDLKVIYRTVWEIKQKTLVDMAVDRGCY 703
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLRSRAAADAIKFTVDTS+ +E+
Sbjct: 704 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSILQERT 763
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + DD+TKMAQ+VCSLTNREECMACGS
Sbjct: 764 KTAD---DDDTKMAQMVCSLTNREECMACGS 791
>gi|47497381|dbj|BAD19419.1| putative ribonucleotide reductase [Oryza sativa Japonica Group]
gi|125584063|gb|EAZ24994.1| hypothetical protein OsJ_08774 [Oryza sativa Japonica Group]
gi|186920366|gb|ACC95436.1| ribonucleotide diphosphate reductase large subunit 2 [Oryza sativa
Japonica Group]
Length = 810
Score = 1474 bits (3816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/811 (85%), Positives = 754/811 (92%), Gaps = 1/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQEAVHFDKITARLK+LSYGLS EHCDPVLV+QKVCAGVYKGVTTSQL ELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKRLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLGELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT +HPDYASLAARIA+SNLHK T KSFSETIK MY HY+ERSGL APLIADD+
Sbjct: 61 AETAAAMTASHPDYASLAARIAISNLHKTTMKSFSETIKVMYMHYDERSGLLAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKN LDSEIIYDRDFDYDYFGFKTLERSYLLKV GKVVERPQHMLMRVSIGIHK
Sbjct: 121 YEIIMKNTTRLDSEIIYDRDFDYDYFGFKTLERSYLLKVVGKVVERPQHMLMRVSIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL+CM DDSIEGIY+TL ECA
Sbjct: 181 DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMNDDSIEGIYDTLSECAT 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKCAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE+RARDLFYALW+PDLFMERVQ N WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQNNENWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EF+ LY YEREGKAKKVV AQ LWF+IL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGDEFQNLYKKYEREGKAKKVVSAQALWFDILKAQIETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIE+TSPTETAVCNLASI LPRFVREK VP+ESHP+++VGS GSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEFTSPTETAVCNLASIGLPRFVREKGVPMESHPAKLVGSNGSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAE+T+IVT NLNKIID NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFDKLAEITSIVTRNLNKIIDTNYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQQLNKDIFETIYYHALK S+EIAAKEGPYETY SPVSKGILQPDMWNV+PSDRW+W
Sbjct: 541 TEAQQLNKDIFETIYYHALKASAEIAAKEGPYETYSGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISK GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 SDLREMISKVGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMGIWSP +KNKI+Y+DGSVQKI EIP++LK IY+TVWEIKQ T+VDMA+DRGCY
Sbjct: 661 LHDLTEMGIWSPVLKNKIVYEDGSVQKISEIPDDLKAIYRTVWEIKQKTIVDMAIDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT++ K+K
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQ 780
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
E D ++KMA+VVCSL NR+EC+ACGS
Sbjct: 781 HNAE-EEDVQSKMAEVVCSLNNRDECLACGS 810
>gi|357125146|ref|XP_003564256.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Brachypodium distachyon]
Length = 814
Score = 1474 bits (3815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 700/814 (85%), Positives = 756/814 (92%), Gaps = 3/814 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA+T +HPDYASLAARIAVSNLHK+TKKSFSETIKDMY HYNERSGL APLIADDI
Sbjct: 61 AETAAALTASHPDYASLAARIAVSNLHKSTKKSFSETIKDMYLHYNERSGLMAPLIADDI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+IMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLK+ G VVERPQHMLMRVS+GIHK
Sbjct: 121 YEVIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGIVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAI+TYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIDSAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE+RARDLF+ALWVPDLFM+RVQ N +WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPDLFMQRVQNNEEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG +FE LY YEREGKAKKV+ AQ LWF+IL +QIETGTPYML+KDTCNRKSNQQNL
Sbjct: 361 DCWGEKFENLYKKYEREGKAKKVIPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSP ETAVCNLASIALPRFVR+K VP+ESHPS++VGS GS+NR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPEETAVCNLASIALPRFVRDKGVPIESHPSKLVGSNGSQNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT+ VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTF+LLGM F+S
Sbjct: 481 DFDKLGEVTSTVTYNLNKIIDMNYYPVETAKRSNMRHRPIGIGVQGLADTFMLLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLN+DIFETIYYHALK S+E+AAKEGPYETY SPVSKG++QPDMWNV PS RW+W
Sbjct: 541 PEAQQLNRDIFETIYYHALKASAELAAKEGPYETYEGSPVSKGVIQPDMWNVTPSSRWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ ISK GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PTLRETISKVGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMGIW+P +KNKIIY+DGSVQK+ EIP++LK IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGIWTPALKNKIIYEDGSVQKMAEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK--- 777
IDQSQSLN+HM+QPNF K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT K
Sbjct: 721 IDQSQSLNVHMEQPNFAKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTGFLKVNG 780
Query: 778 EKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ KP D E KMAQV CSL NREEC+ACGS
Sbjct: 781 DTDTKPAEEDDVEAKMAQVACSLNNREECLACGS 814
>gi|357137493|ref|XP_003570335.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Brachypodium distachyon]
Length = 810
Score = 1473 bits (3813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/811 (85%), Positives = 754/811 (92%), Gaps = 1/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQEAVHFDKITARLKKLSY LS +HCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYSLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT +HPDYASLAARIAVSNLHKNT KSFS+T+K MY H+NERSGL APLIADD+
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTMKSFSDTVKVMYTHFNERSGLMAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNA LDSEIIYDRDFDYDYFGFKTLERSYLLKV GKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNATRLDSEIIYDRDFDYDYFGFKTLERSYLLKVGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SA+KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIY+TL ECA
Sbjct: 181 DDIESAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAS 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL+L+KNHGKEE+RARDLFYALW+PDLFMERVQ N QWSLFCP+EA GL+
Sbjct: 301 LEPWHADIFDFLDLRKNHGKEENRARDLFYALWIPDLFMERVQRNEQWSLFCPSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EF+ LY YEREGKAKKVV AQ+LWF IL +QIETGTPYML+KDTCNRKSNQQNL
Sbjct: 361 DCWGDEFQNLYKKYEREGKAKKVVSAQSLWFGILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIE+TSPTETAVCNLASIALPRFVREKDVP+ESHP+++VGS GSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEFTSPTETAVCNLASIALPRFVREKDVPIESHPAKLVGSNGSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAE+T+ VT NLNKIID+NYYP+ETARRSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFDKLAEITSTVTCNLNKIIDINYYPIETARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYHALK S+ +AAKEGPYETY SPVSKGILQPDMWNV+PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYYHALKASAGLAAKEGPYETYDGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+R+MIS G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PAIREMISNVGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMGIWSP +KN IIY+DGSVQKI EIP++LK IYKTVWEIKQ T+VDMAVDRGCY
Sbjct: 661 LHDLTEMGIWSPALKNNIIYEDGSVQKISEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQ N K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT K+K
Sbjct: 721 IDQSQSLNIHMDQANSGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTGFLKDKQ 780
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ E D + KMAQV CSL NRE+C+ACGS
Sbjct: 781 QSRE-AEDLQAKMAQVACSLNNREDCLACGS 810
>gi|413943018|gb|AFW75667.1| hypothetical protein ZEAMMB73_410950 [Zea mays]
Length = 835
Score = 1463 bits (3787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/839 (83%), Positives = 760/839 (90%), Gaps = 32/839 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSET--------------------IKD 100
AETAAAMT +HPDYASLAARIAVSNLHKNTKKSFSET IKD
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETVKAGLVGLGCELECGRCGCRIKD 120
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
MY H+NERSGL APL+A+D+YEIIM NAA LDSEIIYDRDFDYDYFGFKTLERSYLLK+
Sbjct: 121 MYRHFNERSGLMAPLVAEDVYEIIMNNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLG 180
Query: 161 GKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL 220
GKVVERPQHMLMRVS+GIHK+DI+SAI+TYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL
Sbjct: 181 GKVVERPQHMLMRVSVGIHKEDIESAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFL 240
Query: 221 VCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 280
+CMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN
Sbjct: 241 ICMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 300
Query: 281 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFME 340
DTARYVDQGGGKRKGAFAVYLEPWHADIFEFL+L+KNHGKEE+RARDLFYALWVPDLFM+
Sbjct: 301 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQ 360
Query: 341 RVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIET 400
RVQ+NG+WSLFCPNEA GLADCWG EF+ LY YE +GKAKKVV AQ LWF+IL +QIET
Sbjct: 361 RVQSNGEWSLFCPNEAPGLADCWGEEFDNLYKKYESQGKAKKVVPAQTLWFDILKAQIET 420
Query: 401 GTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDV 460
GTPYML+KDTCNRKSNQQNLGTIKSSNLCTEIIE+TSPTETAVCNLASIALPRFVREK V
Sbjct: 421 GTPYMLYKDTCNRKSNQQNLGTIKSSNLCTEIIEFTSPTETAVCNLASIALPRFVREKGV 480
Query: 461 PVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
P+ESHPS++VGS SKNR+FDFEKLAEVT+ VT NLNKIID+NYYPVETA+RSN+RHRPI
Sbjct: 481 PLESHPSKLVGSSDSKNRYFDFEKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPI 540
Query: 521 GIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPV 580
GIGVQGLADTFILLGM F+S EA QLNKDIFETIYYHALK+S+E+A KEGPYETY SPV
Sbjct: 541 GIGVQGLADTFILLGMPFDSLEAHQLNKDIFETIYYHALKSSAELAVKEGPYETYEGSPV 600
Query: 581 SKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
SKGILQPDMWNV+PS RW+W LR+ ISK G+RNSLLVAPMPTASTSQILGNNECFEPYT
Sbjct: 601 SKGILQPDMWNVVPSTRWNWPSLRETISKAGIRNSLLVAPMPTASTSQILGNNECFEPYT 660
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYK 700
SNIYSRRVLSGEFVVVNKHLLHDLTEMGIW+PT+KN+IIYDDGSVQKI EIP++LK IYK
Sbjct: 661 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWTPTLKNQIIYDDGSVQKIAEIPDDLKAIYK 720
Query: 701 TVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRS 760
TVWEIKQ TLVDMAVDRGCYIDQSQSLN+HM+Q NF K+TSLHF WS+GLKTGMYYLR+
Sbjct: 721 TVWEIKQKTLVDMAVDRGCYIDQSQSLNVHMEQANFGKLTSLHFHAWSKGLKTGMYYLRT 780
Query: 761 RAAADAIKFTVDTSVFKE--------KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
RAAADAIKFTVDT++ KE KP + D E KMAQ+VCS NREEC+ACGS
Sbjct: 781 RAAADAIKFTVDTTLLKENGNGMNDGKPTEE----DVEAKMAQMVCSFNNREECLACGS 835
>gi|297797920|ref|XP_002866844.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312680|gb|EFH43103.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 807
Score = 1449 bits (3752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/780 (86%), Positives = 738/780 (94%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGKQETVHFDKITARLKKLSYGLSIDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARIAVSNLHKNTKKSFSET++DMY+H NERSGL +PLIA D+
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSETVRDMYSHVNERSGLASPLIAADV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMK+A LDSEIIYDRDF+YDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKHATRLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DIDSAIKTYH+MSQRWFTHASPTLFN+GTPR QLSSCFL+CMKDDSIEGIY+TLKECAV
Sbjct: 181 EDIDSAIKTYHLMSQRWFTHASPTLFNSGTPRAQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRATGSYIRGTNG SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGASNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL L+KNHGKEEHRARDLFY LW+PDLFMERVQT+GQWSLFCPNEA GLA
Sbjct: 301 LEPWHADIFDFLELRKNHGKEEHRARDLFYGLWIPDLFMERVQTDGQWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWGAEFE+LYT YE +GKAKKVVQAQ LW+EILTSQ+ETGTPYMLFKD+CN KSNQQNL
Sbjct: 361 DCWGAEFERLYTQYENQGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNSKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTSPTETAVCNLASIALPRFVRE D+P++SHPS+IVGS SKNR+F
Sbjct: 421 GTIKSSNLCTEILEYTSPTETAVCNLASIALPRFVRENDIPLDSHPSKIVGSLDSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVTA VT NLNKIIDVN+YPVETA+ SN+RHRPIGIGVQGLAD FILLGM F+S
Sbjct: 481 DFDKLAEVTATVTVNLNKIIDVNHYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PE+QQLNKDIFETIYYHALK+SSEIA KEG YETY SPVSKGILQPDMWNVIPSDRWDW
Sbjct: 541 PESQQLNKDIFETIYYHALKSSSEIATKEGTYETYQGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LRDMISKNG+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 AALRDMISKNGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLT+MG+WSPT+KNKII+++GS+ + EIP++LK IY+TVWEIKQ T+VDMA DRGC+
Sbjct: 661 LHDLTDMGLWSPTLKNKIIHENGSIVNVKEIPDDLKAIYRTVWEIKQRTVVDMAADRGCF 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHM++PNF K+TSLHF W +GLKTGMYYLRSR+AADAIKFTVDT++ KEKP
Sbjct: 721 IDQSQSLNIHMEKPNFAKLTSLHFYAWKKGLKTGMYYLRSRSAADAIKFTVDTAMLKEKP 780
>gi|242063422|ref|XP_002453000.1| hypothetical protein SORBIDRAFT_04g036410 [Sorghum bicolor]
gi|241932831|gb|EES05976.1| hypothetical protein SORBIDRAFT_04g036410 [Sorghum bicolor]
Length = 810
Score = 1447 bits (3746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/811 (83%), Positives = 748/811 (92%), Gaps = 1/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE+VHFDKITARL +LSYGLS EHCDPVLV+QKVCAGVYKG+TT ++ ELA
Sbjct: 1 MYVVKRDGRQESVHFDKITARLTRLSYGLSAEHCDPVLVAQKVCAGVYKGITTGEIGELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMTT+HPDYASLAARIAVSNLHKNT SFS T+K +Y HY+ERSGL APLIADD+
Sbjct: 61 AETAAAMTTSHPDYASLAARIAVSNLHKNTMTSFSATVKALYTHYDERSGLMAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ IIMKN A L+ EI YDRDFDYDYFGFKTL+RSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 FTIIMKNTARLECEINYDRDFDYDYFGFKTLQRSYLLKIGGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIY+TL ECA
Sbjct: 181 DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAA 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKNHGKEE+RARDLFYALWVPDLFMERVQ N QWSLFCP+EA GLA
Sbjct: 301 LEPWHPDIFEFLDLKKNHGKEENRARDLFYALWVPDLFMERVQHNEQWSLFCPSEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EF+ LY YEREGKAKKVV AQ LWF+IL +QIETGTPYML+KD CNRKSNQQNL
Sbjct: 361 DCWGDEFQNLYQKYEREGKAKKVVAAQALWFDILKAQIETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSP+ETAVCNLASIALPRFVREK VP+ESHP+++VGS GSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPSETAVCNLASIALPRFVREKGVPIESHPAKLVGSSGSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAE+T+IVT NLNKIID++YYP+E ARRSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFDKLAEITSIVTCNLNKIIDISYYPIENARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNKDIFETIYYH+LK S+E+AAKEGPYETY SPVSKGILQPDMWNV+PS RW+W
Sbjct: 541 PEAQQLNKDIFETIYYHSLKASAELAAKEGPYETYAGSPVSKGILQPDMWNVVPSSRWNW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+R+MIS+ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 SAIREMISQVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDL+EMG+WSP +KNKIIY+DGSVQKI E+P++LK IYKTVWEIKQ T+VDMA+DRGCY
Sbjct: 661 LHDLSEMGVWSPVLKNKIIYEDGSVQKITEVPDDLKAIYKTVWEIKQKTIVDMAIDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHM+QPN K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT++ K+K
Sbjct: 721 IDQSQSLNIHMEQPNSGKLTSLHFHGWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQ 780
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
E D + KMAQV CSL NREEC+ACGS
Sbjct: 781 PTSE-EEDAQVKMAQVACSLNNREECLACGS 810
>gi|255587584|ref|XP_002534320.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
gi|223525502|gb|EEF28063.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
Length = 776
Score = 1434 bits (3711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/749 (90%), Positives = 715/749 (95%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITARLKKLSYGLS +HCDPVLVSQKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSMDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFSETIK MYNH+NERSGLKAPLIADD+
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKVMYNHFNERSGLKAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y IIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV++GIHK
Sbjct: 121 YNIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDS IKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIDSVIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEEHRARDLFYALWVPDLFMERVQ+NGQWS+FCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSVFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE+LYT YEREGKAKKVVQAQNLWFEIL SQIETGTPYM+FKDT NRKSNQQNL
Sbjct: 361 DCWGEEFERLYTQYEREGKAKKVVQAQNLWFEILKSQIETGTPYMVFKDTSNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK VP+ESHPS++VGSRGSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPMESHPSKVVGSRGSKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +VT NLNKIIDVNYYPVE A+RSN RHRPIGIGVQGLAD FILLGMAF+S
Sbjct: 481 DFDKLAEVTEVVTCNLNKIIDVNYYPVENAKRSNFRHRPIGIGVQGLADAFILLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQQLNK+IFETIYYHALK SSEIA ++GPYETY SPVSKGILQPDMW V PS RW W
Sbjct: 541 PEAQQLNKEIFETIYYHALKASSEIAGRDGPYETYDGSPVSKGILQPDMWGVTPSSRWSW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MI KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 NALREMIFKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTEMG+WSPT+KNKIIY+DGSVQKIPEIP++LK+IYKTVWEIKQ TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEIPDDLKLIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSR 749
IDQSQSLNIHMDQPNF K+TSLHF WS+
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSK 749
>gi|224082486|ref|XP_002306711.1| predicted protein [Populus trichocarpa]
gi|222856160|gb|EEE93707.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 1432 bits (3706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/812 (82%), Positives = 740/812 (91%), Gaps = 3/812 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQE V FDKITARLKKLSYGLS +HCDPVLV+QKVCAGVY+GVTT+QLDELA
Sbjct: 1 MYVIKRDGRQEPVRFDKITARLKKLSYGLSNDHCDPVLVAQKVCAGVYRGVTTTQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT NHPDYA LAARI+VS LHKNTKKSFSETI+ MYN+ N+ SG KAPLIADD+
Sbjct: 61 AETAASMTANHPDYALLAARISVSRLHKNTKKSFSETIELMYNNLNKGSGQKAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNA LDSEI+YDRDF+YDYFGFKTLERSYLLKV GK+VERPQH+LMRV++GIHK
Sbjct: 121 YEIIMKNAERLDSEILYDRDFEYDYFGFKTLERSYLLKVDGKIVERPQHLLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SA KTYH+MSQ WFTHA+PTLFNAGT +PQLSSCFL+CMKDDSIEGIY+TLKECAV
Sbjct: 181 DDIESATKTYHLMSQSWFTHATPTLFNAGTAQPQLSSCFLLCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VHNI ATGSYIRGTNGTSNGIVPMLRVFN+TARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKLAGGIGIAVHNIHATGSYIRGTNGTSNGIVPMLRVFNNTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEEHRARDLF ALW+PDLFMERV+ + +WSLFCP+EA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFLALWIPDLFMERVRGDDKWSLFCPSEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLYT YERE +AKK++ A+ LWFEIL SQIETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGQEFEKLYTQYEREDRAKKIISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTE+IE+TSPTETAVCNLAS+ALPRFV E+ VP ES S++VGSR SKNR+F
Sbjct: 421 GTIKSSNLCTEVIEFTSPTETAVCNLASVALPRFVMERGVPAESQSSKMVGSRESKNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT +T NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFEKLAEVTTTITANLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LNKDIFETIYYHAL++SSE+AAK+GPYETY SPVSKGILQ DMW V PSDRWDW
Sbjct: 541 SEAKRLNKDIFETIYYHALRSSSELAAKDGPYETYCGSPVSKGILQMDMWGVTPSDRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISK+GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV+NKHL
Sbjct: 601 DALREMISKSGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVMNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L+DLTEMG+WSP +KNKII + GSV KIPEIPE+LK IYKTVWEIKQ TLVDMA DRGCY
Sbjct: 661 LNDLTEMGLWSPVLKNKIINESGSVSKIPEIPEQLKAIYKTVWEIKQKTLVDMAADRGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF-KEK 779
IDQSQSLNIHM+QP+ K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT+V E
Sbjct: 721 IDQSQSLNIHMEQPDLGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTVLNNEN 780
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
K E V+ + MAQ CSL NREECMACGS
Sbjct: 781 ANKAEDDVNSD--MAQAACSLQNREECMACGS 810
>gi|255566650|ref|XP_002524309.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
gi|223536400|gb|EEF38049.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
Length = 810
Score = 1425 bits (3688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/812 (83%), Positives = 744/812 (91%), Gaps = 3/812 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDG QE VHFDKITARLKKLSYGL++E+CDPVLV+QKVC+G YKGVTT+QLDELA
Sbjct: 1 MYVIKRDGHQETVHFDKITARLKKLSYGLNSEYCDPVLVAQKVCSGFYKGVTTTQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMTTNHPDYA LAAR+AVSNLHKNTKKSFSETIK MY+H N+RSG KA LIADD+
Sbjct: 61 AETAAAMTTNHPDYAILAARVAVSNLHKNTKKSFSETIKLMYSHINKRSGQKASLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKNA LDSEIIYDRDFDYDYFGFKTLERSYLLK+ GK+VERPQHMLMRV+IGIHK
Sbjct: 121 YEIIMKNATRLDSEIIYDRDFDYDYFGFKTLERSYLLKIDGKIVERPQHMLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++SA+KTYH+M+QRWFTHA+PTLFNAGTP+PQLSSCFL CMKDDSIEGI++TLKECAV
Sbjct: 181 DDVESAVKTYHLMAQRWFTHATPTLFNAGTPQPQLSSCFLGCMKDDSIEGIFDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHN+RATGS+I GTNG SNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKVAGGIGLSVHNVRATGSFICGTNGESNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE RARDLFYALW+PDLFMERV+ +G WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEERRARDLFYALWIPDLFMERVRGDGSWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLYT YE +AKKV+ A+ LWFEIL SQIETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGEEFEKLYTFYEDGDRAKKVIPARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTE+IE+TSPTETAVCNLASIALPRFVRE+ VP+ SH S++VGSR SK R+F
Sbjct: 421 GTIKSSNLCTEVIEFTSPTETAVCNLASIALPRFVRERGVPIGSHSSKLVGSRDSKTRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLAE+T +T NLNKIID+NYYPV+TARRSNLRHRP+GIGVQGLADTFILLGM F+S
Sbjct: 481 DFAKLAEITVTITANLNKIIDINYYPVDTARRSNLRHRPMGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQQLNKDIFETIYYHALK+SSE+AA +GPYETY SPVSKGILQ DMW VIPSDRWDW
Sbjct: 541 LEAQQLNKDIFETIYYHALKSSSELAAIDGPYETYKGSPVSKGILQMDMWGVIPSDRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VLR+MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 NVLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLTE+G+WS +KNKIIY++GSV K+PEIPE+LK IYKTVWEIKQ TLVDMAV RGCY
Sbjct: 661 LHDLTEIGLWSHALKNKIIYENGSVAKVPEIPEQLKAIYKTVWEIKQKTLVDMAVARGCY 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK-EK 779
IDQSQSLNIHMDQP+ K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDTSV K E
Sbjct: 721 IDQSQSLNIHMDQPDLGKLTSLHFYAWSKGLKTGMYYLRTRAAADAIKFTVDTSVLKHEN 780
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
VD T MAQ+VCSL NREECMACGS
Sbjct: 781 VNSTNDYVD--TDMAQMVCSLRNREECMACGS 810
>gi|168022742|ref|XP_001763898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684903|gb|EDQ71302.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 811
Score = 1406 bits (3640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/813 (81%), Positives = 738/813 (90%), Gaps = 4/813 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQEAVHFDKITARLKKLSYGL+ EHC+PVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVIKRDGRQEAVHFDKITARLKKLSYGLNPEHCEPVLVAQKVCMGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYA LAARIAVSNLHKNTKKSFSET+KDMY H NERSGLK+PLIADD+
Sbjct: 61 AETAAAMTANHPDYAILAARIAVSNLHKNTKKSFSETVKDMYYHVNERSGLKSPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II+KNA LDSEIIYDRDFDYDYFGFKTLERSYLLKV GKVVERPQHMLMRVS+GIHK
Sbjct: 121 YDIIIKNAPRLDSEIIYDRDFDYDYFGFKTLERSYLLKVNGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++I++ +KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL+CMK+DSIEGIY+TLKECAV
Sbjct: 181 ENIEAVLKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLLCMKNDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIR TGSYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSVHNIRTTGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFE+L+L+KNHGKEE RARDLFY LW+PDLFM+RVQ NG WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEWLDLRKNHGKEESRARDLFYGLWIPDLFMQRVQNNGTWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG +FE LY YE EG+AKKVVQAQ LWF +L +QIETG PY+LFKD CNRKSNQQNL
Sbjct: 361 DCWGEQFETLYARYELEGRAKKVVQAQKLWFAVLEAQIETGNPYILFKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+E+TSP ETAVCNLAS+ALPRFVREK V +ESHP++I+GS G +NRFF
Sbjct: 421 GTIKSSNLCTEIVEFTSPDETAVCNLASLALPRFVREKGVSLESHPTKIIGSNGHENRFF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL E+T++VT NLN+IIDVNYYPVETARRSN+RHRPIG+GVQGLAD FILLGM F+S
Sbjct: 481 DFNKLGEITSLVTRNLNRIIDVNYYPVETARRSNMRHRPIGLGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQQLN+DIFETIYYHALKTS E+AA+EG YETY SP+SKG LQPDMWNV PS RWDW
Sbjct: 541 EEAQQLNRDIFETIYYHALKTSCELAAEEGVYETYAGSPISKGALQPDMWNVKPSTRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR MI NGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DSLRQMILNNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L+DLT MG+W+ +KN++IY +GS+Q+I IP++LK IY+TVWEIKQ ++VDMA RG +
Sbjct: 661 LNDLTNMGLWTHDLKNQVIYHNGSIQQIDVIPDDLKKIYRTVWEIKQRSIVDMAAARGAF 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF TW++GLKTGMYYLRSRAAADAIKFTVD S K+
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYTWTKGLKTGMYYLRSRAAADAIKFTVDQSSIKQ-- 778
Query: 781 EKPELVVDD--ETKMAQVVCSLTNREECMACGS 811
E P VV + E KM+Q+VCSL N++ECM+CGS
Sbjct: 779 ETPAAVVSNNLEEKMSQMVCSLENKDECMSCGS 811
>gi|168046427|ref|XP_001775675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672948|gb|EDQ59478.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 813
Score = 1400 bits (3625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/813 (80%), Positives = 736/813 (90%), Gaps = 2/813 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQE+VHFDKITARLKKLSYGL+ EHC+PVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVIKRDGRQESVHFDKITARLKKLSYGLNPEHCEPVLVAQKVCMGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT NHPDYA LAARIAVSNLHKNTKKSFSET+KDMY H N RSGLK+PLI DD+
Sbjct: 61 AETAAAMTANHPDYAILAARIAVSNLHKNTKKSFSETVKDMYRHVNARSGLKSPLIDDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I+KNAA LDSEIIYDRDFDYDYFGFKTLERSYLL+V GKVVERPQHMLMRVS+GIHK
Sbjct: 121 YDLIIKNAALLDSEIIYDRDFDYDYFGFKTLERSYLLRVNGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+ID+ +KTYH MSQRWFTHASPTLFNAGTPRPQLSSCFLVC K DSIEGIY+TLKECAV
Sbjct: 181 DNIDAVLKTYHTMSQRWFTHASPTLFNAGTPRPQLSSCFLVCTKGDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIRATGSYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSVHNIRATGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF++L+L+KNHGKEE+RARDLFY LW+PDLFM RVQ NG WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFDWLDLRKNHGKEENRARDLFYGLWIPDLFMRRVQENGVWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLYT YE EGKAKKVVQAQ LWF +L +QIETG PY+LFKD CNRKSNQQNL
Sbjct: 361 DCWGEEFEKLYTRYEVEGKAKKVVQAQKLWFAVLEAQIETGNPYILFKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+E+TSP ETAVCNLASIALPRFVRE+ VP++SHP++++GS G ++R+F
Sbjct: 421 GTIKSSNLCTEIVEFTSPDETAVCNLASIALPRFVRERGVPMDSHPTKVIGSNGYESRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL E+T++VT NLN+IIDVNYYPVE ARRSN+RHRPIG+GVQGLAD FILLGM F+S
Sbjct: 481 DFEKLGEITSLVTRNLNRIIDVNYYPVEAARRSNMRHRPIGLGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN+DIFETIYYHAL+TS E+AA+EG YETY P+SKG+LQPDMW+V PS RWDW
Sbjct: 541 EEAQKLNRDIFETIYYHALRTSCELAAEEGVYETYDGCPISKGLLQPDMWDVKPSSRWDW 600
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR MI+KNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALRRMIAKNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L+DLT++G+W+ +KN+IIY +GS+Q+I IP LK IY+TVWEIKQ +VDMA RG +
Sbjct: 661 LNDLTDLGLWTQDLKNQIIYHNGSIQQIDAIPAGLKKIYRTVWEIKQRAIVDMAAARGAF 720
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHMDQPNF K+TSLHF +W++GLKTGMYYLRSRAAADAIKFTVD S K K
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYSWTKGLKTGMYYLRSRAAADAIKFTVDQSSIKTKQ 780
Query: 781 EKPELVV--DDETKMAQVVCSLTNREECMACGS 811
P + D E K++Q+VCSL N+EECM+CGS
Sbjct: 781 ATPAAAIAEDLEVKLSQMVCSLENKEECMSCGS 813
>gi|302805775|ref|XP_002984638.1| hypothetical protein SELMODRAFT_156827 [Selaginella moellendorffii]
gi|300147620|gb|EFJ14283.1| hypothetical protein SELMODRAFT_156827 [Selaginella moellendorffii]
Length = 803
Score = 1390 bits (3597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/811 (79%), Positives = 733/811 (90%), Gaps = 8/811 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDG+QEAVHFDKITARLKKLSY L+ ++CDPV+V+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVIKRDGKQEAVHFDKITARLKKLSYSLNPDYCDPVIVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT+HPDYA LAARI VSNLHK TKKSFSET+K+MY+H +ERSGLKAPLIA+D+
Sbjct: 61 AETAASMTTSHPDYAILAARIVVSNLHKKTKKSFSETVKEMYSHVDERSGLKAPLIANDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+IIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLKV G+VVERPQHMLMRVS+GIHK
Sbjct: 121 YDIIMKNAAKLDSEIIYDRDFDYDYFGFKTLERSYLLKVNGRVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AIKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMK+DSIEGIY+TLKECAV
Sbjct: 181 EDIEAAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLLCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSVHNIRATNSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F++L+LKKNHGKEE+RARDLFY LW+PDLFMERV++N WSLFCPNEA GLA
Sbjct: 301 LEPWHADVFDWLDLKKNHGKEENRARDLFYGLWIPDLFMERVRSNSDWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE LYT YEREG+AK+ + AQ LWF IL SQ+ETG PYM+FKDTCNRKSNQQNL
Sbjct: 361 DCWGEEFESLYTRYEREGRAKRSLSAQKLWFAILESQMETGNPYMVFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTSP+ETAVCNLASIALPRFVRE+ + E +++VGS+G KNR F
Sbjct: 421 GTIKCSNLCTEIVEYTSPSETAVCNLASIALPRFVREQGINSE---TKLVGSKGCKNRVF 477
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLAEVT +VTENLNKIID+NYYPV+TA+RSNLRHRPIGIGVQGLAD FILLG+ F+S
Sbjct: 478 DFHKLAEVTTVVTENLNKIIDINYYPVDTAKRSNLRHRPIGIGVQGLADAFILLGLPFDS 537
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LNKDIFETIYYHA+KTSS +A G YETY SPVSKG+ QPDMWNVIPS RWDW
Sbjct: 538 EEARDLNKDIFETIYYHAMKTSSILAELYGVYETYPGSPVSKGVFQPDMWNVIPSGRWDW 597
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++M++++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHL
Sbjct: 598 AALKEMVARHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKHL 657
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L+DLT++GIW+P +KNK++ +GS+Q I IP++LK IY+TVWEIKQ T+VDMAV+RG Y
Sbjct: 658 LNDLTDLGIWTPDLKNKVMAYNGSIQSIEGIPDDLKQIYRTVWEIKQRTIVDMAVERGAY 717
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHM+QP K+TSLHF WS GLKTGMYYLRS+AAADAIKFTVDT+ K P
Sbjct: 718 IDQSQSLNIHMEQPTTTKLTSLHFHAWSGGLKTGMYYLRSQAAADAIKFTVDTASLKS-P 776
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
K DE +AQ+VCSL NRE C+ACGS
Sbjct: 777 TK----TTDEELLAQMVCSLENRENCLACGS 803
>gi|307103606|gb|EFN51865.1| hypothetical protein CHLNCDRAFT_32953 [Chlorella variabilis]
Length = 810
Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/810 (74%), Positives = 697/810 (86%), Gaps = 3/810 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKR G V FDKITAR+ KLSYGL+ + CDPVLV+QKV GVYKGVTTS+LDELA
Sbjct: 1 MYVVKRSGVLAPVSFDKITARISKLSYGLNPDFCDPVLVAQKVTTGVYKGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++T HPDYA LAARIAVSNLHKNT KSFSET+K M++H N ++G KAPLI + +
Sbjct: 61 AETAASLTATHPDYALLAARIAVSNLHKNTLKSFSETVKLMFSHVNPKNGEKAPLIDEKV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIM++A LDSEI+YDRDFDYDYFGFKTLERSY+L+V G+VVERPQHMLMRV++GIH
Sbjct: 121 YEIIMEHAERLDSEIVYDRDFDYDYFGFKTLERSYMLRVNGRVVERPQHMLMRVAVGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D+A++TYH++SQRWFTHASPTLFNAGTPRPQLSSCFLVCMK+DSIEGIY+TLKECA
Sbjct: 181 EDVDAAVETYHLLSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKNDSIEGIYDTLKECAS 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSMHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
EPWHADIF++L+L+KNHGKEE RARDLFYALW+PDLFM RV+ NG+WSLFCPNE+ GLA
Sbjct: 301 CEPWHADIFDWLDLRKNHGKEEARARDLFYALWIPDLFMHRVEANGEWSLFCPNESPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE LY+ YEREG+A+KV++AQ LWF IL +Q+ETG P+ML+KD+ NRKSNQQNL
Sbjct: 361 DCWGEEFEALYSRYEREGRARKVIKAQQLWFAILEAQVETGNPFMLYKDSANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEY+SP ETAVCNLAS+ALPRFVREK+ P ++VGS ++ R+F
Sbjct: 421 GTIKSSNLCTEIIEYSSPEETAVCNLASVALPRFVREKE-PSGREGKKLVGSLDAEGRYF 479
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVTA+ T NLNKIIDVNYYPVETARRSN+RHRPIG+GVQGLADTF+LLG+ F+S
Sbjct: 480 DFDKLAEVTAVATRNLNKIIDVNYYPVETARRSNMRHRPIGLGVQGLADTFLLLGLPFDS 539
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA +LN+ IFETIY+ AL+TS +++ EGPY TY SPVSKGILQPDMW V PSDRWDW
Sbjct: 540 PEAAELNRQIFETIYFAALRTSMQLSKAEGPYSTYEGSPVSKGILQPDMWGVKPSDRWDW 599
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I++NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEFVVVN+HL
Sbjct: 600 DGLRRDIAQNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFVVVNQHL 659
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDLT +G+W +KN+I+ GSV + +IP LK +YKTVWEIKQ LVDMA DRG +
Sbjct: 660 LHDLTRLGLWDTDVKNEIVAASGSVADL-DIPNNLKELYKTVWEIKQRVLVDMAADRGAF 718
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF-KEK 779
IDQSQS N+HM PNF K+TSLHF W +GLKTGMYYLRSRAAADAIKFTVD + K
Sbjct: 719 IDQSQSFNVHMSDPNFGKLTSLHFYAWKKGLKTGMYYLRSRAAADAIKFTVDQQALQRRK 778
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMAC 809
E+ + MA +VCSL N++ C+ C
Sbjct: 779 SERLAKENKATSDMAAMVCSLENKDACVMC 808
>gi|302793891|ref|XP_002978710.1| hypothetical protein SELMODRAFT_109545 [Selaginella moellendorffii]
gi|300153519|gb|EFJ20157.1| hypothetical protein SELMODRAFT_109545 [Selaginella moellendorffii]
Length = 786
Score = 1287 bits (3330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/777 (77%), Positives = 686/777 (88%), Gaps = 28/777 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDG+QEAVHFDKITARLKKLSY L+ ++CDPV+V+QKVCAGVYKGVTTSQLDELA
Sbjct: 1 MYVIKRDGKQEAVHFDKITARLKKLSYSLNPDYCDPVIVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT+HPDYA LAARI VSNLHK TKKSFSET+K+MY+H +ERSGLKAPLIA+D+
Sbjct: 61 AETAASMTTSHPDYAILAARIVVSNLHKKTKKSFSETVKEMYSHVDERSGLKAPLIANDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+IIMKNAA LDSEIIYDRDFDYDYFGFKTLERSYLLKV G+VVERPQHMLMRVS+GIHK
Sbjct: 121 YDIIMKNAAKLDSEIIYDRDFDYDYFGFKTLERSYLLKVNGRVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AIKTYH+MSQRWFTHASPTLFNAGTPRPQLSSCFL+CMK+DSIEGIY+TLKECAV
Sbjct: 181 EDIEAAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLLCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK
Sbjct: 241 ISKSAGGIGLSVHNIRATNSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK------ 294
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
D+F++L+LKKNHGKEE+RARDLFY LW+PDLFMERV++N WSLFCPNEA GLA
Sbjct: 295 ------DVFDWLDLKKNHGKEENRARDLFYGLWIPDLFMERVRSNSDWSLFCPNEAPGLA 348
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE LYT YEREG+AK+ + AQ LWF IL SQ+ETG PYM+FKDTCNRKSNQQNL
Sbjct: 349 DCWGEEFESLYTRYEREGRAKRSLSAQKLWFAILESQMETGNPYMVFKDTCNRKSNQQNL 408
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTSP+ETAVCNLASIALPRFVRE+ + S+ +
Sbjct: 409 GTIKCSNLCTEIVEYTSPSETAVCNLASIALPRFVREQGI-------------NSETKLV 455
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +VT +VTENLNKIID+NYYPV+TA+RSNLRHRPIGIGVQGLAD FILLG+ F+S
Sbjct: 456 D---CFQVTTVVTENLNKIIDINYYPVDTAKRSNLRHRPIGIGVQGLADAFILLGLPFDS 512
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LNKDIFETIYYHA+KTSS +A G YETY SPVSKG+ QPDMWNVIPS RWDW
Sbjct: 513 EEARDLNKDIFETIYYHAMKTSSVLAELYGVYETYPGSPVSKGVFQPDMWNVIPSGRWDW 572
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++M++++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHL
Sbjct: 573 PALKEMVARHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKHL 632
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L+DLT++GIW+P +KNK++ +GS+Q I IP++LK IY+TVWEIKQ T+VDMAV+RG Y
Sbjct: 633 LNDLTDLGIWTPDLKNKVMAYNGSIQSIEGIPDDLKQIYRTVWEIKQRTIVDMAVERGAY 692
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM+QP K+TSLHF WS GLKTGMYYLRS+AAADAIKFTVDT+ K
Sbjct: 693 IDQSQSLNIHMEQPTTTKLTSLHFHAWSGGLKTGMYYLRSQAAADAIKFTVDTASLK 749
>gi|384246529|gb|EIE20019.1| NSG5 protein [Coccomyxa subellipsoidea C-169]
Length = 847
Score = 1271 bits (3289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/848 (70%), Positives = 699/848 (82%), Gaps = 38/848 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+EAV FDKITAR+ KLSYGL+T+ CDPVLV+QKV GVYKGVTTS+LD+LA
Sbjct: 1 MFVQKRDGRREAVSFDKITARVTKLSYGLNTDFCDPVLVAQKVTTGVYKGVTTSELDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA+LAARIA+SNLHKNT KSFSET+K MY+H N ++G +PLIA D+
Sbjct: 61 AETAASMTATHPDYATLAARIAISNLHKNTLKSFSETMKLMYSHVNPKNGEASPLIARDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+EI++++A LDSEIIY+RDFDYDYFGFKTLERSYLL++ G VVERPQHMLMRV++GIHK
Sbjct: 121 FEIVLQHAERLDSEIIYNRDFDYDYFGFKTLERSYLLRINGAVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TYH +S+RWFTHASPTLFNAGTPRPQLSSCFL+ MK+DSIEGIY+TLKECA
Sbjct: 181 EDIEAAIRTYHYLSERWFTHASPTLFNAGTPRPQLSSCFLIAMKNDSIEGIYDTLKECAA 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+HNIRA GSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSIHNIRAVGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF++L+L+KNHGKEE RARDLFY LW DLFMERV++N WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTTDLFMERVESNADWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG E LYT YEREG+AK+V++AQ LWF IL +Q+ETG PYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGDEHAALYTRYEREGRAKRVIKAQQLWFAILEAQVETGNPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+E+TSP ETAVCNLASIALPR+VRE++ S ++ GS + NR+F
Sbjct: 421 GTIKCSNLCTEIVEFTSPEETAVCNLASIALPRYVREREGTPSSGRPKLAGSLNAPNRYF 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL EVT I+TENLNKIID+N+YP ETARRSN+RHRPIGIGVQGLADTFILLGM F+S
Sbjct: 481 DFEKLQEVTHIITENLNKIIDINFYPAETARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
EA+QLNK+IFETIY+ AL+ S +A +GPYETY SPVSKG+LQ DMW V PS RWD
Sbjct: 541 AEAKQLNKEIFETIYFAALEKSCSLAKTDGPYETYAGSPVSKGVLQHDMWEVQPPSQRWD 600
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN+H
Sbjct: 601 WDTLRASIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVNQH 660
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL G+WS KN+++ +GSVQ + +IP++LK +YKTVWE+KQ TLVDMA DRG
Sbjct: 661 LLSDLVASGLWSADTKNELVAANGSVQGL-DIPDDLKALYKTVWELKQRTLVDMAADRGA 719
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD------- 772
+IDQSQS N+HM PNF K+TSLHF W GLKTGMYYLR+RAAADAIKFTVD
Sbjct: 720 FIDQSQSFNVHMSDPNFGKLTSLHFYAWKAGLKTGMYYLRTRAAADAIKFTVDQQALTKK 779
Query: 773 -----------------TSVFKEKPEKPE--------LVVDDETK----MAQVVCSLTNR 803
T KE+ P +D+E + +A +VCSL N+
Sbjct: 780 KAARAAKSAADLAASSVTVALKERNGSPSRQFASVKVAALDEEMQKERELAAMVCSLENK 839
Query: 804 EECMACGS 811
+ C+ CGS
Sbjct: 840 DACLMCGS 847
>gi|303273186|ref|XP_003055954.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462038|gb|EEH59330.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 816
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/818 (72%), Positives = 695/818 (84%), Gaps = 9/818 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITAR+ KL+YGL+ +HCDPVLV+QKV +GVYKGVTTS+LDELA
Sbjct: 1 MYVVKRDGRQEPVHFDKITARINKLAYGLNQDHCDPVLVAQKVASGVYKGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT+ HPDYA LAARIAVSNLHKNT KSFSET+K M+ H N+R+G +PL+ADD+
Sbjct: 61 AETAASMTSKHPDYAQLAARIAVSNLHKNTLKSFSETMKVMHEHVNKRNGKWSPLLADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEII NAA D+EI+YDRDFDYDYFG+KTLERSYLL+V GK+VERPQH+LMRV+IGIHK
Sbjct: 121 YEIIKANAATFDAEIVYDRDFDYDYFGYKTLERSYLLRVDGKIVERPQHLLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D ++ AI TYHM+S+RW THASPTLFN+GTPRPQLSSCFL+ MK+DSIEGIY+TLKECA
Sbjct: 181 D-VEKAIDTYHMLSERWMTHASPTLFNSGTPRPQLSSCFLIAMKEDSIEGIYDTLKECAC 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H+IRAT SYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 240 ISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAVY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF++L+L+KNHGKEE RARDLFY LW DLFM RV++NG W+L CPNE GLA
Sbjct: 300 LEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMRRVESNGDWTLMCPNECPGLA 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WGAEFEKLYT YE +GK KK ++AQ LWF IL +Q+ETG PYMLFKD CN KSNQQNL
Sbjct: 360 DSWGAEFEKLYTSYEEQGKGKKTIKAQQLWFAILEAQVETGNPYMLFKDACNSKSNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPV---ESHPSRIVGSRGSKN 477
GTI+SSNLCTEI+E+TSP ETAVCNLASIALPRFV E++ + ++ GS G+ +
Sbjct: 420 GTIRSSNLCTEIVEFTSPEETAVCNLASIALPRFVVEENPASPTGRTEAKKLRGSLGAAS 479
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
R FD KLAE+T VT NLN+IIDVNYYPVETARRSN+RHRPIG+GVQGLAD FILLG+A
Sbjct: 480 RTFDHAKLAEITRKVTRNLNRIIDVNYYPVETARRSNMRHRPIGLGVQGLADVFILLGLA 539
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV--IP- 594
F+SPEAQ+LN +IFETIY+ AL S+ IAA +G YETY SPVSKGILQPDMW V +P
Sbjct: 540 FDSPEAQKLNAEIFETIYFAALTESNAIAAVDGHYETYPGSPVSKGILQPDMWGVTEMPG 599
Query: 595 SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
DR DW LR I+ +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF
Sbjct: 600 GDRHDWAALRAKIATSGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRVLSGEFT 659
Query: 655 VVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMA 714
VVN+HLL+DLTE+G+W P +KN++I ++GSVQ + +IP+ LK IYKTVWEIKQ LVDMA
Sbjct: 660 VVNQHLLNDLTELGLWDPKLKNELIANNGSVQGL-DIPDHLKAIYKTVWEIKQRVLVDMA 718
Query: 715 VDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
DRG +IDQSQS N+HM N K+TSLHF W +GLKTGMYYLRSRAAADA+KFTVD +
Sbjct: 719 ADRGAFIDQSQSFNVHMSDANSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAVKFTVDQA 778
Query: 775 VFKEKPEKPELVVDDETKM-AQVVCSLTNREECMACGS 811
+ + +++E +M A++ CSL N++EC+ CG+
Sbjct: 779 GKGNAQKSADPDMEEEARMAAKLACSLANKDECVMCGA 816
>gi|255070623|ref|XP_002507393.1| ribonucleoside-diphosphate reductase [Micromonas sp. RCC299]
gi|226522668|gb|ACO68651.1| ribonucleoside-diphosphate reductase [Micromonas sp. RCC299]
Length = 841
Score = 1261 bits (3264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/841 (71%), Positives = 698/841 (82%), Gaps = 32/841 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE VHFDKITAR+ KL+YGL+ E CDPVLV+QKV GVYKGVTTS+LDELA
Sbjct: 3 MYVVKRDGRQEPVHFDKITARINKLAYGLNQEFCDPVLVAQKVAVGVYKGVTTSELDELA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT+ HPDYA LAARIAVSNLHKNT KSFSET+K MY H N+R+G +PL+ADD+
Sbjct: 63 AETAASMTSKHPDYAQLAARIAVSNLHKNTLKSFSETMKVMYEHVNKRNGKWSPLLADDV 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEII +NA DSEI+YDRDFDYDYFG+KTLERSYLL+V GK+VERPQH+LMRV+IGIHK
Sbjct: 123 YEIIKENADRFDSEIVYDRDFDYDYFGYKTLERSYLLRVDGKIVERPQHLLMRVAIGIHK 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D ++ AI TYHM+S+RW THASPTLFN+GTPRPQLSSCFL+ MK+DSIEGIY+TLKECA
Sbjct: 183 D-VEKAIDTYHMLSERWMTHASPTLFNSGTPRPQLSSCFLIAMKEDSIEGIYDTLKECAC 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H+IRAT SYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 242 ISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 301
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF++L+L+KNHGKEE RARDLFY LW DLFM+RV+ NG+W+LFCPNEA GLA
Sbjct: 302 LEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGEWTLFCPNEAPGLA 361
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE LY YE EGK KK V+AQ LWF IL SQ+ETG PYMLFKD CNRKSNQQNL
Sbjct: 362 DCWGEEFEALYEKYEAEGKGKKTVKAQQLWFAILESQVETGNPYMLFKDACNRKSNQQNL 421
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKD--VPV-ESHPSRIVGSRGSKN 477
GTI+SSNLCTEI+EYTSP ETAVCNLASIALPRFV E + P + ++ GS G+ N
Sbjct: 422 GTIRSSNLCTEIVEYTSPEETAVCNLASIALPRFVIENNPQSPTGRTEAKKLRGSIGAAN 481
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
R+FD +KLAE+T VT NLN+IIDVNYYPVETARRSN++HRPIG+GVQGLAD FILLGM
Sbjct: 482 RYFDHDKLAEITRKVTRNLNRIIDVNYYPVETARRSNMKHRPIGLGVQGLADVFILLGMP 541
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV--IP- 594
F+SPEA++LN +IFETIY+ AL S++IA ++G YE+Y SPVS G+LQPDMW + +P
Sbjct: 542 FDSPEAKKLNAEIFETIYFAALTESNDIAKRDGTYESYPGSPVSNGVLQPDMWGLTEMPG 601
Query: 595 SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
DR DW LR IS++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF
Sbjct: 602 GDRHDWTGLRTKISEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRVLSGEFT 661
Query: 655 VVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMA 714
VVN+HLL DLTEMG+W P++KN++I ++GSVQ + +IP+ LK IYKTVWEIKQ LVDMA
Sbjct: 662 VVNQHLLSDLTEMGLWDPSLKNELIANNGSVQSL-DIPDNLKEIYKTVWEIKQRILVDMA 720
Query: 715 VDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
DRG +IDQSQS N+HM N K+TSLHF W +GLKTGMYYLRSRAAADA+KFTVD +
Sbjct: 721 ADRGAFIDQSQSFNVHMSDANSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAVKFTVDPN 780
Query: 775 VFKEK--PEKPELVVDDETK----------------------MAQVVCSLTNREECMACG 810
K K K E+V D E + A++ CSL N++EC+ CG
Sbjct: 781 SVKAKNASSKKEVVGDKENQPANGEGAKKGPVDPDMEEEALMAAKIACSLANKDECVMCG 840
Query: 811 S 811
+
Sbjct: 841 A 841
>gi|145340510|ref|XP_001415366.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575589|gb|ABO93658.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 817
Score = 1259 bits (3259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/826 (72%), Positives = 690/826 (83%), Gaps = 27/826 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YVVKRDGR+E V FDKITAR+KKL+YGLS E CDPV+V+QKVC GV+ GVTT +LDELA
Sbjct: 4 LYVVKRDGREEPVAFDKITARIKKLAYGLSQEFCDPVIVAQKVCMGVFAGVTTKELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT+ HPDYA LAARIAVSNLHK TKKSFSET+ MY H NER+G +PL+ADD+
Sbjct: 64 AETAASMTSKHPDYAQLAARIAVSNLHKTTKKSFSETMTQMYEHVNERNGKWSPLLADDV 123
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEII NA LD+EI+YDRDF+YDYFG+KTLERSYLL++ GKVVERPQH+LMRVSIGIHK
Sbjct: 124 YEIIKANAERLDAEIVYDRDFEYDYFGYKTLERSYLLRIDGKVVERPQHLLMRVSIGIHK 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ A+ TYHM+S+RW THASPTLFNAGTPRPQLSSCFL+ MK+DSIEGIY+TLKECA
Sbjct: 184 EDIEKAVDTYHMLSERWMTHASPTLFNAGTPRPQLSSCFLIAMKEDSIEGIYDTLKECAC 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H+IRAT SYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 244 ISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF++L+L+KNHGKEE RARDLFY LW DLFM+RV+ NG W+L CPNE GLA
Sbjct: 304 IEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGDWTLMCPNECPGLA 363
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE LY YE EGK KK ++AQ LWF IL SQ+ETG PYMLFKD CNRKSNQQNL
Sbjct: 364 DCWGEEFETLYQKYEAEGKGKKTIKAQQLWFAILESQVETGNPYMLFKDACNRKSNQQNL 423
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS---------RIVG 471
GTIKSSNLCTEI+E+TSP ETAVCNLASIALPRFV +E++PS ++VG
Sbjct: 424 GTIKSSNLCTEIVEFTSPEETAVCNLASIALPRFV------IENNPSSPTGRTEVKKLVG 477
Query: 472 SRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
S +K R+FD +KL E+T VT NLN+IIDVNYYPVETA+RSN+RHRPIG+GVQGLAD F
Sbjct: 478 SLKAKERYFDHDKLFEITRKVTRNLNRIIDVNYYPVETAKRSNMRHRPIGLGVQGLADVF 537
Query: 532 ILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN 591
ILLG+AF+SPEAQ+LN +IFETIY+ AL S+ +A EGPY TY SPVSKGILQPDMW
Sbjct: 538 ILLGLAFDSPEAQKLNAEIFETIYFAALTESNALAVVEGPYTTYEGSPVSKGILQPDMWG 597
Query: 592 V--IP-SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+ +P DR DW LR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRV
Sbjct: 598 LTQMPGGDRHDWAGLRAAIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRV 657
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
LSGEF VVN+HLL DLTE+G+W P +KN +I ++GSV + EIPE LK IYKTVWEIKQ
Sbjct: 658 LSGEFTVVNQHLLSDLTELGLWDPELKNSLIANNGSVADL-EIPENLKAIYKTVWEIKQR 716
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
LVDMA DRG +IDQSQS N+HM PN K+TSLHF W +GLKTGMYYLRSRAAADAIK
Sbjct: 717 ILVDMAADRGAFIDQSQSFNVHMSDPNSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAIK 776
Query: 769 FTVDT---SVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
FTVD V K E+ E + A++ CSLTN+++C+ CG+
Sbjct: 777 FTVDVKQKQVTKMSEEEKEAYL-----AAKLQCSLTNKDDCVMCGA 817
>gi|302844064|ref|XP_002953573.1| hypothetical protein VOLCADRAFT_82353 [Volvox carteri f.
nagariensis]
gi|300261332|gb|EFJ45546.1| hypothetical protein VOLCADRAFT_82353 [Volvox carteri f.
nagariensis]
Length = 824
Score = 1246 bits (3223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/822 (72%), Positives = 696/822 (84%), Gaps = 12/822 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQE V FDKITAR+ KL+YGL+ + CD VLV+QKV GVYKGVTTS+LDELA
Sbjct: 4 MYVIKRDGRQEPVMFDKITARIVKLAYGLNPDFCDAVLVAQKVAGGVYKGVTTSELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA+T+ HPDYA LAARIAVSNLHK TKKSFSET++ +YN+ N R+G +A LI ++
Sbjct: 64 AETAAALTSTHPDYAILAARIAVSNLHKKTKKSFSETMEALYNYKNPRTGQEASLIDKEV 123
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++II++NAA L+SEI YDRDFD+DYFGFKTLERSYLL++ G+VVERPQ MLMRV++GIHK
Sbjct: 124 FQIIIQNAARLNSEIRYDRDFDFDYFGFKTLERSYLLRMNGEVVERPQQMLMRVAVGIHK 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAI+TYH MS+RWFTHASPTLFN+GTPRPQLSSCFL+CM+DDSI+GIY+TLKECAV
Sbjct: 184 DDIESAIQTYHAMSERWFTHASPTLFNSGTPRPQLSSCFLLCMRDDSIDGIYDTLKECAV 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 244 ISKSAGGIGLSIHCIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHAD+FEFL+L+KNHGKEE RARDLFY LW+PDLFMERV+ + +WSLFCPNEA LA
Sbjct: 304 IEPWHADVFEFLDLRKNHGKEEARARDLFYGLWIPDLFMERVEADKEWSLFCPNEAQDLA 363
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWGA+FE+LYT YEREG+A+KVV+AQ LWF IL +Q+ETG PYML+KD+CN+KSNQQNL
Sbjct: 364 ECWGADFERLYTQYEREGRARKVVRAQQLWFAILEAQVETGNPYMLYKDSCNKKSNQQNL 423
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEIIEYTSP E AVCNLASIALPRFVRE+ ++VGS + NRFF
Sbjct: 424 GTIKCSNLCTEIIEYTSPDEIAVCNLASIALPRFVRERGSQPGWESKKLVGSLDAPNRFF 483
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAE+T + T NLNKIIDVNYYP A++SN+RHRPIG+GVQGLADTFI+LGM F+S
Sbjct: 484 DFEKLAEMTQMATRNLNKIIDVNYYPHPKAQKSNMRHRPIGLGVQGLADTFIILGMPFDS 543
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS---DR 597
PEA +LN+ IFE IYY AL S E+A ++G YETY SPVS+GILQPDMW V P+ R
Sbjct: 544 PEAAELNRQIFEVIYYAALSASCELAERDGTYETYEGSPVSQGILQPDMWGVKPTGVGSR 603
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW LRD I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN
Sbjct: 604 CDWPALRDRIARHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVN 663
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HLLHDL MG+WSP +KN+++ +GSV + +IP ELK +YKTVWEIKQ TLVDMA DR
Sbjct: 664 QHLLHDLNRMGLWSPELKNELVAANGSVADL-DIPVELKALYKTVWEIKQRTLVDMAADR 722
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF- 776
G YIDQSQS N+ M PNF K+TSLHF W +GLKTGMYYLR++AAADAIKFTVD
Sbjct: 723 GAYIDQSQSFNVFMPDPNFGKLTSLHFYAWRKGLKTGMYYLRTKAAADAIKFTVDQQALS 782
Query: 777 KEKPEKPELVVDDET-------KMAQVVCSLTNREECMACGS 811
++K P + T ++A +VCSL N+E C+ CGS
Sbjct: 783 RKKASNPPPTLSLPTGKFSVGAQLAAMVCSLENKEACLMCGS 824
>gi|159485006|ref|XP_001700540.1| ribonucleoside-diphosphate reductase large subunit [Chlamydomonas
reinhardtii]
gi|158272180|gb|EDO97984.1| ribonucleoside-diphosphate reductase large subunit [Chlamydomonas
reinhardtii]
Length = 878
Score = 1228 bits (3178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/782 (74%), Positives = 675/782 (86%), Gaps = 4/782 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQE V FDKITAR+ KL+YGL+ + CD VLV+QKV GVYKGVTTS+LDELA
Sbjct: 4 MYVLKRDGRQEPVMFDKITARIVKLAYGLNPDFCDAVLVAQKVAGGVYKGVTTSELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA+T+ HPDYA LAARIAVSNLHKNT+KSFS+T+ +Y + N R+G +A LIA D+
Sbjct: 64 AETAAALTSTHPDYAILAARIAVSNLHKNTEKSFSKTMDKLYTYRNPRNGEEAALIAKDV 123
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II++NA LDSEI YDRDFDYDYFGFKTLERSYLL++ GKVVERPQHMLMRV++GIHK
Sbjct: 124 YDIIVQNAQRLDSEIRYDRDFDYDYFGFKTLERSYLLRIDGKVVERPQHMLMRVAVGIHK 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAI TYH MS+RWFTHASPTLFN GTPRPQLSSCFL+ M+DDSI+GIY+TLKECAV
Sbjct: 184 EDIESAITTYHAMSERWFTHASPTLFNGGTPRPQLSSCFLLAMRDDSIDGIYDTLKECAV 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H IR TGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 244 ISKSAGGIGLSIHCIRGTGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHAD+F+FL+L+KNHGKEE RARDLFY LW+PDLFMERV+ + +WSLFCPNEA GLA
Sbjct: 304 MEPWHADVFDFLDLRKNHGKEEARARDLFYGLWIPDLFMERVEADKEWSLFCPNEAPGLA 363
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE+LY YE+EG++++VV+AQ LWF IL +Q+ETG PYML+KD CNRKSNQQNL
Sbjct: 364 DCWGEEFERLYLKYEQEGRSRRVVRAQQLWFAILEAQVETGNPYMLYKDHCNRKSNQQNL 423
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEIIEYTSP E AVCNLASIALPRFVRE+ ++VGS + NRFF
Sbjct: 424 GTIKCSNLCTEIIEYTSPDEIAVCNLASIALPRFVRERGSQPGWESKKLVGSLDAANRFF 483
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAE+T +VT NLNKIIDVNYYP A+RSN+RHRPIG+GVQGLADTFILLGMAF+S
Sbjct: 484 DFEKLAEMTKMVTRNLNKIIDVNYYPHPKAQRSNMRHRPIGLGVQGLADTFILLGMAFDS 543
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS---DR 597
PEA +LN+ IFE +Y+ AL TS E+A ++GPYETY SPVS+G+LQPDMW V P+ R
Sbjct: 544 PEAAELNRQIFEVVYHAALSTSCELAERDGPYETYAGSPVSQGVLQPDMWGVKPTGVDGR 603
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
+W LR+ I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN
Sbjct: 604 CNWEELRNRIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVN 663
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HLLHDL MGIWS +KN+++ +GSV ++ EIPEELK +YKTVWEIKQ TLVDMA DR
Sbjct: 664 QHLLHDLNRMGIWSADLKNELVAANGSVLEL-EIPEELKGLYKTVWEIKQRTLVDMAADR 722
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G YIDQSQS N+ M PNF K+TSLHF W +GLKTGMYYLR++AAADAIKFTVD
Sbjct: 723 GAYIDQSQSFNVFMPDPNFGKLTSLHFYAWRKGLKTGMYYLRTKAAADAIKFTVDQQALS 782
Query: 778 EK 779
+K
Sbjct: 783 KK 784
>gi|52000447|dbj|BAD44751.1| NSG5 protein [Chlamydomonas reinhardtii]
Length = 878
Score = 1228 bits (3176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/782 (74%), Positives = 675/782 (86%), Gaps = 4/782 (0%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQE V FDKITAR+ KL+YGL+ + CD VLV+QKV GVYKGVTTS+LDELA
Sbjct: 4 MYVLKRDGRQEPVMFDKITARIVKLAYGLNPDFCDAVLVAQKVAGGVYKGVTTSELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA+T+ HPDYA LAARIAVSNLHKNT+KSFS+T+ +Y + N R+G +A LIA D+
Sbjct: 64 AETAAALTSTHPDYAILAARIAVSNLHKNTEKSFSKTMDKLYTYRNPRNGEEAALIAKDV 123
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II++NA LDSEI YDRDFDYDYFGFKTLERSYLL++ GKVVERPQHMLMRV++GIHK
Sbjct: 124 YDIIVQNAQRLDSEIRYDRDFDYDYFGFKTLERSYLLRIDGKVVERPQHMLMRVAVGIHK 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI TYH MS+RWFTHASPTLFN GTPRPQLSSCFL+ M+DDSI+GIY+TLKECAV
Sbjct: 184 EDIEAAITTYHAMSERWFTHASPTLFNGGTPRPQLSSCFLLAMRDDSIDGIYDTLKECAV 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H IR TGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 244 ISKSAGGIGLSIHCIRGTGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHAD+F+FL+L+KNHGKEE RARDLFY LW+PDLFMERV+ + +WSLFCPNEA GLA
Sbjct: 304 MEPWHADVFDFLDLRKNHGKEEARARDLFYGLWIPDLFMERVEADKEWSLFCPNEAPGLA 363
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE+LY YE+EG++++VV+AQ LWF IL +Q+ETG PYML+KD CNRKSNQQNL
Sbjct: 364 DCWGEEFERLYLKYEQEGRSRRVVRAQQLWFAILEAQVETGNPYMLYKDHCNRKSNQQNL 423
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEIIEYTSP E AVCNLASIALPRFVRE+ ++VGS + NRFF
Sbjct: 424 GTIKCSNLCTEIIEYTSPDEIAVCNLASIALPRFVRERGSQPGWESKKLVGSLDAANRFF 483
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAE+T +VT NLNKIIDVNYYP A+RSN+RHRPIG+GVQGLADTFILLGMAF+S
Sbjct: 484 DFEKLAEMTKMVTRNLNKIIDVNYYPHPKAQRSNMRHRPIGLGVQGLADTFILLGMAFDS 543
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS---DR 597
PEA +LN+ IFE +Y+ AL TS E+A ++GPYETY SPVS+G+LQPDMW V P+ R
Sbjct: 544 PEAAELNRQIFEVVYHAALSTSCELAERDGPYETYAGSPVSQGVLQPDMWGVKPTGVDGR 603
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
+W LR+ I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN
Sbjct: 604 CNWEELRNRIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVN 663
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HLLHDL MGIWS +KN+++ +GSV ++ EIPEELK +YKTVWEIKQ TLVDMA DR
Sbjct: 664 QHLLHDLNRMGIWSADLKNELVAANGSVLEL-EIPEELKGLYKTVWEIKQRTLVDMAADR 722
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G YIDQSQS N+ M PNF K+TSLHF W +GLKTGMYYLR++AAADAIKFTVD
Sbjct: 723 GAYIDQSQSFNVFMPDPNFGKLTSLHFYAWRKGLKTGMYYLRTKAAADAIKFTVDQQALS 782
Query: 778 EK 779
+K
Sbjct: 783 KK 784
>gi|412993613|emb|CCO14124.1| Ribonucleoside-diphosphate reductase subunit [Bathycoccus prasinos]
Length = 816
Score = 1197 bits (3096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/808 (70%), Positives = 662/808 (81%), Gaps = 37/808 (4%)
Query: 37 VLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSE 96
VLV+QKVC GVY GVTT++LDELAAETAAAMT+ HPDYA LAARIAVSNLHK T KSFS
Sbjct: 13 VLVAQKVCQGVYPGVTTAELDELAAETAAAMTSKHPDYAQLAARIAVSNLHKTTDKSFST 72
Query: 97 TIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYL 156
T+K MY H N R+G +PL+ADD+YEII +NA D+EI+YDRDFDYDYFGFKTLERSYL
Sbjct: 73 TMKKMYEHTNHRNGKWSPLLADDVYEIITENAERFDAEIVYDRDFDYDYFGFKTLERSYL 132
Query: 157 LKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
L++ GKVVERPQHMLMRVSIGIHK DI+ A+ TYHM+S+RW THASPTLFNAGTPRPQLS
Sbjct: 133 LRIDGKVVERPQHMLMRVSIGIHKKDIEKAVDTYHMLSERWMTHASPTLFNAGTPRPQLS 192
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SCFL+CMK+DSIEGIY+TLKECA ISKSAGGIG+S+H+IRAT SYIRGTNGTSNGI+PML
Sbjct: 193 SCFLICMKEDSIEGIYDTLKECACISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPML 252
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
RVFNDTARYVDQGGGKRKGAFA+YLEPWH+DIF++L+L+KNHGKEE RARDLFY LW D
Sbjct: 253 RVFNDTARYVDQGGGKRKGAFAIYLEPWHSDIFDWLDLRKNHGKEEARARDLFYGLWTND 312
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTS 396
LFM+RV+ NG+W+L CPNE GL++CWG EFE LYT YE+E K KK + AQ LWF IL +
Sbjct: 313 LFMKRVEENGKWTLMCPNECPGLSECWGEEFEALYTKYEKENKGKKTINAQQLWFAILEA 372
Query: 397 QIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVR 456
Q+ETG PYMLFKD CNRKSNQQNLGTIKSSNLCTEI+E+TSP ETAVCNLASIALPRFV
Sbjct: 373 QVETGNPYMLFKDACNRKSNQQNLGTIKSSNLCTEIVEFTSPEETAVCNLASIALPRFVI 432
Query: 457 EKDVPVESHPS------RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETA 510
EK+ ES P+ +++GS + +R+FD KL+E+T VT NLN+IIDVNYYPVETA
Sbjct: 433 EKN---ESSPTGKTETKKLLGSLRASDRYFDHAKLSEITRKVTRNLNRIIDVNYYPVETA 489
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG 570
+RSN++HRPIG+GVQGLAD FILLG+ F+SPEAQ+LN +IFETIY+ AL+ S+E+A +EG
Sbjct: 490 KRSNMKHRPIGLGVQGLADVFILLGLPFDSPEAQKLNAEIFETIYFAALQESNELAKEEG 549
Query: 571 PYETYHNSPVSKGILQPDMWNV--IP-SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTS 627
YE+Y SPVSKG+LQPDMW V +P DR W LR+ I+K+GVRNSLLVAPMPTASTS
Sbjct: 550 TYESYEGSPVSKGVLQPDMWGVTEMPGGDRHGWSALRESIAKHGVRNSLLVAPMPTASTS 609
Query: 628 QILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQK 687
QILGNNECFEPYTSNIY+RRVLSGEF VVN+HLL DLTEMG+W PT+KN +I D+GSV
Sbjct: 610 QILGNNECFEPYTSNIYARRVLSGEFTVVNQHLLSDLTEMGLWDPTLKNSLISDNGSVVN 669
Query: 688 IPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTW 747
+ +IP+ LK IYKTVWEIKQ LVDMA RG +IDQSQS N+HM N K+TSLHF W
Sbjct: 670 L-DIPDNLKAIYKTVWEIKQRILVDMAAARGAFIDQSQSFNVHMSDANSGKLTSLHFHAW 728
Query: 748 SRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELV--------------------- 786
GLKTGMYYLRSRAAADAIKFTVD + +K EK ++
Sbjct: 729 KSGLKTGMYYLRSRAAADAIKFTVDPTKAAKKVEKENVLKPSNGGPKPTAVPTKKEVSEM 788
Query: 787 --VDDETKM-AQVVCSLTNREECMACGS 811
+ E M A++ CSL N++EC+ CGS
Sbjct: 789 SEAEQEAHMAAKLKCSLENKDECLMCGS 816
>gi|256421018|ref|YP_003121671.1| ribonucleoside-diphosphate reductase subunit alpha [Chitinophaga
pinensis DSM 2588]
gi|256035926|gb|ACU59470.1| ribonucleoside-diphosphate reductase, alpha subunit [Chitinophaga
pinensis DSM 2588]
Length = 802
Score = 1170 bits (3028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/772 (70%), Positives = 647/772 (83%), Gaps = 20/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDG +EAV FDKITAR++KL YGL+ E+ D + V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGHKEAVKFDKITARVEKLCYGLNAEYVDAIDVAKKVIQGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++TT HPDYA LA+RIAVSNLHKNT KSFS+T++++YN+ + + G APL+ADD+
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTVKSFSKTMENLYNYIDPKVGKPAPLLADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK+AA LDS IIYDRDF +DYFGFKTLERSYLLK+ GKV ERPQHM MRVS+GIHK
Sbjct: 121 YEIVMKHAAILDSSIIYDRDFAFDYFGFKTLERSYLLKLDGKVAERPQHMFMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+ IKTY++MS+RWFTHA+PTLFNAGTP+PQ+SSCFL+ M+DDSIEGIY+TLK+ A
Sbjct: 181 EDIDAVIKTYNLMSERWFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE RARDLFYALWVPDLFM RV+ NG WSLFCP+EA GL
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEMRARDLFYALWVPDLFMRRVEENGDWSLFCPHEAPGLH 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFEKLYT YE+E +A+K V+AQ+LWF +L +QIETGTPY+L+KD+ NRKSNQQNL
Sbjct: 361 ECWGEEFEKLYTKYEKENRARKTVKAQDLWFAVLDAQIETGTPYLLYKDSANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT E AVCNLAS+ALPRFV + F
Sbjct: 421 GTIKSSNLCTEIIEYTDANEVAVCNLASLALPRFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D EKL EVT NLN+IID N+YPV+ AR SNLRHRPIG+GVQGLAD FIL+ FES
Sbjct: 461 DHEKLYEVTYQAALNLNRIIDNNFYPVDEARNSNLRHRPIGLGVQGLADAFILMRYPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN +IFETIY+ AL S ++A K+G YETY SPVSKGILQ DMW V PS RWDW
Sbjct: 521 EEAKKLNSEIFETIYFAALNASKDLAIKDGAYETYAGSPVSKGILQFDMWGVTPSPRWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHL
Sbjct: 581 TSLKGEIKKHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+G+W +KNKII +GS+Q IPEIP ++K +YKTVWEIKQ T++DMA DRG +
Sbjct: 641 LKDLVELGLWDNDMKNKIITSNGSIQHIPEIPSQIKELYKTVWEIKQRTIIDMAADRGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
I QSQSLN+ +D P+ K+TS+HF W +GLKTGMYYLR++AAA A++FTV+
Sbjct: 701 ICQSQSLNLFVDTPSAAKLTSMHFYAWKKGLKTGMYYLRTQAAAQAVQFTVE 752
>gi|312130871|ref|YP_003998211.1| ribonucleoside-diphosphate reductase subunit alpha [Leadbetterella
byssophila DSM 17132]
gi|311907417|gb|ADQ17858.1| ribonucleoside-diphosphate reductase, alpha subunit [Leadbetterella
byssophila DSM 17132]
Length = 820
Score = 1169 bits (3024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/836 (66%), Positives = 668/836 (79%), Gaps = 41/836 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR+E+V FDKITAR+++L YGL PV V+ KV AG+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGRRESVKFDKITARIERLCYGLDPYFVQPVEVAMKVVAGIYDGVTTSELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA LAAR+A+SNLHKNT KSFS T+K +Y + + ++G A LI+ +
Sbjct: 61 AETAASMTTKHPDYAILAARVAISNLHKNTLKSFSGTMKLLYQYVDPKTGENAALISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++II NAA LDS IIYDRDF YD+FG+KTLE+SYL+K+ GK+VERPQHMLMRV++GIH
Sbjct: 121 WKIIQANAALLDSSIIYDRDFGYDFFGYKTLEKSYLMKLNGKIVERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++I+ AI+TY+++S+RWFTHA+PTLFNAGTP+PQLSSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 181 ENIEKAIETYNLLSERWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI+GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFLNLKKNHGKEE RARDLFYALW PDLFM+RV+ N WSLFCP+E GLA
Sbjct: 301 LEPWHADIFEFLNLKKNHGKEEERARDLFYALWTPDLFMKRVEANADWSLFCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +FE+LYT YE EGKA+K + AQ LWF+IL SQ+ETGTPYML+KD N+KSNQ+NL
Sbjct: 361 DTYGEDFERLYTKYEAEGKARKTIPAQELWFQILESQVETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT+P E AVCNLASIALP+FV + P S F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVNTEG-PAPS---------------F 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +VT NLN+IID+NYYPV A SN RHRPIG+G+QGLAD FIL+ F+S
Sbjct: 465 DFQKLYEVTKVVTRNLNRIIDINYYPVPEAENSNKRHRPIGLGIQGLADAFILMRFPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EAQ+LN+D+FET+Y+ A++TS E+A +EGPY ++ SP+SKGI Q DMW+V P S WD
Sbjct: 525 EEAQKLNRDVFETLYFAAMETSMELAKEEGPYSSFEGSPISKGIFQFDMWDVTPDSGLWD 584
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH
Sbjct: 585 WEDLRKKVMEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 644
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL ++G+W+ T+KNK+I +GSVQ+IPEIPE+LK +YKT WEIKQ +++DM+ DRG
Sbjct: 645 LLRDLVKIGLWNDTMKNKLIAANGSVQQIPEIPEDLKALYKTAWEIKQKSIIDMSADRGA 704
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD------- 772
YI QSQSLNI M PNF K+TS+HF W GLKTGMYYLR++AAADA+KFTVD
Sbjct: 705 YICQSQSLNIFMTDPNFAKLTSMHFYAWKAGLKTGMYYLRTKAAADAVKFTVDRQAIAET 764
Query: 773 ---TSVFKEKP--------------EKPELVVDDETKMAQVVCSLTNREECMACGS 811
T +EKP + ++E K A + CSL N E C CGS
Sbjct: 765 SPVTETIQEKPLDYKGYAKEQAEKAAASFQMTEEEQKYAAMQCSLDNPEGCEMCGS 820
>gi|392968362|ref|ZP_10333778.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrisoma limi
BUZ 3]
gi|387842724|emb|CCH55832.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrisoma limi
BUZ 3]
Length = 827
Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/842 (65%), Positives = 669/842 (79%), Gaps = 46/842 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR+E+V FDKITAR++KL YGL + + PV V+ KV G+Y GV T++LD LA
Sbjct: 1 MYVVKRDGRRESVKFDKITARIEKLCYGLDSTYVQPVEVAMKVVNGLYDGVKTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA LAARIA+SNLHK T KSFS TIK +Y + + ++G A LI+ ++
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKETNKSFSSTIKRLYTYEDPKTGENASLISKEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE++ K+AA LDS IIYDRD+ YDYFG+KTLE+SYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 121 YEVVRKHAALLDSTIIYDRDYGYDYFGYKTLEKSYLLKIDGKIAERPQHMLMRVAVGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+++AI+TY+++S++WFTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 181 EDVEAAIETYNLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATG+YI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 241 ISQSAGGIGLSIHNVRATGTYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LKKNHGKEE RARDLFYALW PDLFM+RV+ N WSLFCP+E GLA
Sbjct: 301 LEPWHADIFEFLDLKKNHGKEELRARDLFYALWTPDLFMKRVEANDVWSLFCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LYT YEREG+A++ V+AQ+LW+EIL SQ ETGTPYML+KD NRKSNQ+NL
Sbjct: 361 DCYGDEFEELYTRYEREGRARRTVKAQDLWYEILESQTETGTPYMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSP E AVCNLASIALP+F++ P ++ F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFIKRD-------PDGVLR--------F 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL E+T + T+NLNKIID+NYYPVE ARRSN+RHRPIG+GVQGLAD FI+L M FES
Sbjct: 466 DHQKLFEITKVATKNLNKIIDLNYYPVEEARRSNMRHRPIGLGVQGLADAFIMLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA++LN+DIFETIY+ A+ S E A GPYET+ SP+S+GI Q DMW V P S+RW+
Sbjct: 526 EEARRLNEDIFETIYFGAMTASMEEAKTYGPYETWKGSPISQGIFQFDMWGVTPKSNRWN 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 586 WEALRKDVVEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL ++G+W+ +KN +I +GSVQ IP IP+ +K +YKTVWEIKQ ++DMA DRG
Sbjct: 646 LLKDLVKLGLWNDAMKNNLILANGSVQAIPGIPQHIKDLYKTVWEIKQKHIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV-------- 771
YI QSQSLNIH+ NF K+TS+HF W GLKTGMYYLR++AAADA+KFTV
Sbjct: 706 YICQSQSLNIHIQDANFGKLTSMHFYAWKAGLKTGMYYLRTKAAADAVKFTVVQPQAEPQ 765
Query: 772 ----------------------DTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ +V + KPE +V D E A + CSL + E C C
Sbjct: 766 LEPALAETAPVEKPLDYVQYAKEHAVMQPKPEPLPMVSDVEQNYAAMTCSLDDPEGCEMC 825
Query: 810 GS 811
GS
Sbjct: 826 GS 827
>gi|340375670|ref|XP_003386357.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Amphimedon queenslandica]
Length = 794
Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/811 (66%), Positives = 654/811 (80%), Gaps = 21/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ KL Y L+ + +PV ++ KV GVY GVTTS+LD LA
Sbjct: 5 MYVIKRDGREEGVMFDKITSRITKLCYNLNNDFVEPVTITMKVINGVYAGVTTSELDTLA 64
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA LAARIAVSNLHK TKK FS ++D+Y++ N ++G P+I+ +
Sbjct: 65 AETAASMTTKHPDYAILAARIAVSNLHKETKKCFSAVMQDLYDYVNPKNGRHCPMISAET 124
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+II NA L+S I+Y+RD+DY YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH
Sbjct: 125 NKIIQDNADKLNSAILYNRDYDYSYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHG 184
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+++D AI+TY++MS+RWFTHASPTLFN+GT RPQLSSCFL+ M DDSIEGIY+TLK CA
Sbjct: 185 NNLDKAIETYNLMSERWFTHASPTLFNSGTCRPQLSSCFLLTMADDSIEGIYDTLKRCAN 244
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IR++GSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 245 ISKSAGGIGLAVHKIRSSGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 304
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADI FL+L+KNHGKEE RARDLFYALW PDLFM RV+++G WSL CP+E GL
Sbjct: 305 IEPWHADIIGFLDLRKNHGKEEQRARDLFYALWTPDLFMRRVESDGMWSLMCPDECPGLY 364
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EF++LY YE EG+A+ V++AQ LWF IL SQIETGTPYML+KD CNRKSNQ+NL
Sbjct: 365 ETWGDEFDQLYEKYEAEGRARTVIRAQKLWFAILESQIETGTPYMLYKDACNRKSNQKNL 424
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEI+EYTSP E AVCNLASIALPRFV E F
Sbjct: 425 GTIQCSNLCTEIVEYTSPDEVAVCNLASIALPRFVSEGQ--------------------F 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF++L EVT ++T NLN+IID+NYYPV AR SNLRHRPIGIGVQGLADTFIL+ +F+
Sbjct: 465 DFQRLFEVTKVITRNLNRIIDINYYPVPEARTSNLRHRPIGIGVQGLADTFILMRYSFDC 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN+ IFETIYY AL S E+A +EG YETYH SPVS+GILQ DMW+V PSD WDW
Sbjct: 525 EEAQELNRMIFETIYYAALTASCELAGEEGVYETYHGSPVSQGILQYDMWDVTPSDLWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYSRRVLSGEF +VN HL
Sbjct: 585 KALKEQIAKYGIRNSLLVAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQIVNSHL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL+E G+W+ +K ++I D+GSVQ IPEIP+ELK++YKTVWEI Q TL++MA DRG Y
Sbjct: 645 MRDLSERGLWNDDMKQRLIKDNGSVQNIPEIPDELKVLYKTVWEISQKTLINMAADRGAY 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS NIHM + NF K+TS+HF W +GLKTGMYYLR+RAAA AI+FTVD +V K
Sbjct: 705 IDQSQSFNIHMGETNFGKMTSMHFYGWKKGLKTGMYYLRTRAAAQAIQFTVDQTVIKSAS 764
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
K + + +E + A ++CSL N+E C++C +
Sbjct: 765 TKSDEMKKEEQEEA-MICSLKNKEACISCSA 794
>gi|440751432|ref|ZP_20930665.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Mariniradius saccharolyticus AK6]
gi|436480074|gb|ELP36339.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Mariniradius saccharolyticus AK6]
Length = 801
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/818 (66%), Positives = 657/818 (80%), Gaps = 24/818 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKIT R++ L YGL + + P+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCYGLDSRYIHPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A++T HPDYA LAARIA+SNLHK T +SFS T+K MY + N ++G A LIA D+
Sbjct: 61 AEVCASLTVKHPDYAVLAARIAISNLHKTTSQSFSNTMKRMYTYINPKTGENAALIAPDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ +AA LD I Y RDFDYDYFGFKTLE+SYL+K+ GKVVERPQHMLMRV++GIHK
Sbjct: 121 YGVVKNHAAKLDEAIDYTRDFDYDYFGFKTLEKSYLIKLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DIDSAI+TYH++SQ+WFTHA+PTLFNAGTP+ QLSSCFL+ MKDDSI+GIY+TLK+CA
Sbjct: 181 EDIDSAIETYHLLSQKWFTHATPTLFNAGTPKAQLSSCFLLTMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ +FL LK+NHGKEE RARDLFYA+W+PDLFM+RV+ N +WSLFCPNEA GLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNDEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC G EFE+LY YE+EG+A++VV+AQ LWFEIL SQIETGTPYML+KD+ N+KSNQQNL
Sbjct: 361 DCHGEEFERLYEKYEKEGRAREVVKAQELWFEILESQIETGTPYMLYKDSANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT+P E AVCNLASIALP+FV E G G FF
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVTE-------------GPDGK--LFF 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D KL E+T + T NLNK+ID+NYYPVE ARRSN RHRPIG+GVQGLAD FI+L M F+S
Sbjct: 466 DHNKLYEITKVATRNLNKVIDINYYPVEEARRSNFRHRPIGLGVQGLADAFIMLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA+ LN+DIFETIYY A++TS E+A +G YET+ SP SKGILQ DMW V P S RW+
Sbjct: 526 AEAKGLNEDIFETIYYAAVETSMELAKTQGSYETFEGSPASKGILQFDMWGVTPKSGRWN 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + ++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WDELKVNVIQHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL ++G+W+ T+KN++I +GSVQ IP IP+ +K IYKTVWE+ Q ++DMA DRG
Sbjct: 646 LMKDLIKLGLWNDTMKNRLIAANGSVQNIPGIPQNIKDIYKTVWELSQRVIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQS+N+ M PNF K+TS+HF W +GLKTGMYYLRS+AAA AI+FTVD S +
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAAAAIQFTVDKSAL--E 763
Query: 780 PEK------PELVVDDETKMAQVVCSLTNREECMACGS 811
P+K P + + K + CSL N E+C CGS
Sbjct: 764 PDKTIVAQTPTMDLTKSQKQGAIACSLDNPEDCEMCGS 801
>gi|441498219|ref|ZP_20980419.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Fulvivirga imtechensis AK7]
gi|441438007|gb|ELR71351.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Fulvivirga imtechensis AK7]
Length = 781
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/800 (67%), Positives = 656/800 (82%), Gaps = 20/800 (2%)
Query: 13 VHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHP 72
+ FDK+TAR++KL YGL + +PV +++KV G+Y GVTT +LD LAAETAA++TT HP
Sbjct: 1 MKFDKVTARIEKLCYGLDMNYIEPVDIAKKVINGIYDGVTTVELDNLAAETAASLTTKHP 60
Query: 73 DYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLD 132
D+A LAARIA+SNLHK T KSFS T+K +Y + + ++G APLI+ + Y +I K+AA LD
Sbjct: 61 DFALLAARIAISNLHKVTSKSFSNTMKRLYTYVDPKTGENAPLISKEAYGVIKKHAALLD 120
Query: 133 SEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHM 192
S IIYDRDF YDYFGFKTLERSYL++V+GK+VERPQHMLMRV+IGIH DDID+AI+TY++
Sbjct: 121 SSIIYDRDFSYDYFGFKTLERSYLMRVEGKIVERPQHMLMRVAIGIHMDDIDAAIETYNL 180
Query: 193 MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSV 252
+S++WFTHA+PTLFNA TP+PQLSSCFL+ M+DDSI+GIY+TLK+CA IS+SAGGIG+S+
Sbjct: 181 LSEKWFTHATPTLFNAATPKPQLSSCFLLTMQDDSIDGIYDTLKQCAKISQSAGGIGLSI 240
Query: 253 HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFL 312
HN+RATGSYI+GT G SNGIVPMLR F+ TARYVDQGGGKRKG+FA+YLEPWHADIF+FL
Sbjct: 241 HNVRATGSYIKGTGGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIYLEPWHADIFDFL 300
Query: 313 NLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYT 372
+LKKNHGKEE RARDLFYALW+PDLFM+RV+ N WSLFCPNEA GLADC+G EFEKLYT
Sbjct: 301 DLKKNHGKEELRARDLFYALWIPDLFMKRVEDNDVWSLFCPNEAPGLADCYGDEFEKLYT 360
Query: 373 HYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEI 432
YEREGK +K V+AQ+LWFE+L +QIETGTPYML+KD N+KSNQ+NLGTIKSSNLCTEI
Sbjct: 361 KYEREGKYRKQVKAQDLWFEVLEAQIETGTPYMLYKDAANKKSNQKNLGTIKSSNLCTEI 420
Query: 433 IEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIV 492
+EYT+P E AVCNLASIALP+FV E + FD +KL E+T +V
Sbjct: 421 VEYTAPDEVAVCNLASIALPKFVTE-------------------DGRFDHQKLYEITKVV 461
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFE 552
T+NLNK+ID+NYYPV+ AR SN+RHRPIGIGVQGLADTF++L M F+SPEA+ LNK I E
Sbjct: 462 TKNLNKVIDINYYPVKEARNSNMRHRPIGIGVQGLADTFLMLKMPFDSPEARGLNKHIHE 521
Query: 553 TIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWDWGVLRDMISKNG 611
TIY+ A+ S EIA EGPYETY SPVSKGI Q DMW V P S RWDW L+ + KNG
Sbjct: 522 TIYFAAMTASMEIATVEGPYETYKGSPVSKGIFQFDMWGVTPDSGRWDWESLKKEVRKNG 581
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWS 671
VRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKHL+ DL +G+W
Sbjct: 582 VRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKHLMKDLIALGLWD 641
Query: 672 PTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHM 731
++KN++I +GSVQ IPEIP+ +K +YKTVWEI Q ++DMA DRG YI QSQS+N+H+
Sbjct: 642 DSMKNRLIEANGSVQNIPEIPQHIKDLYKTVWEISQKAIIDMAADRGAYICQSQSMNVHI 701
Query: 732 DQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDET 791
PNF K+TS+HF W +GLKTGMYYLRS+AAA AI+FTVD S ++ + + V ++E
Sbjct: 702 QDPNFGKLTSMHFYAWKKGLKTGMYYLRSKAAASAIQFTVDKSAKQQPAAQQQAVTNEEQ 761
Query: 792 KMAQVVCSLTNREECMACGS 811
A +VCSL N + C ACGS
Sbjct: 762 NRADMVCSLDNPDACEACGS 781
>gi|436833879|ref|YP_007319095.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrella
aestuarina BUZ 2]
gi|384065292|emb|CCG98502.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrella
aestuarina BUZ 2]
Length = 825
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/840 (65%), Positives = 662/840 (78%), Gaps = 44/840 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E+V FDKITAR++KL YGL + PV V+ KV G+Y GV T++LD LA
Sbjct: 1 MYVIKRDGRRESVKFDKITARIEKLCYGLDPAYVQPVEVAMKVVNGLYDGVKTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA LAAR+A+SNLHK T KSFS TIK +Y + + ++G A LI+ ++
Sbjct: 61 AETAASMTTKHPDYAILAARVAISNLHKETNKSFSGTIKRLYTYIDPKTGENASLISKEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I NAA LDS IIYDRD+ YDYFG+KTLE+SYLLK+ G++ ERPQHMLMRV++GIH
Sbjct: 121 YDVIRNNAAVLDSTIIYDRDYGYDYFGYKTLEKSYLLKIDGRIAERPQHMLMRVAVGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDID+AI+TY+++S++WFTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 181 DDIDAAIETYNLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATG+YI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 241 ISQSAGGIGLSIHNVRATGTYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL LKKNHGKEE RARDLFYA+W PDLFM+RV+ N WSLFCP+E GL+
Sbjct: 301 LEPWHADIFDFLQLKKNHGKEELRARDLFYAIWTPDLFMKRVEDNDTWSLFCPHECPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YEREG+A++ V+AQ LWFEIL +Q ETGTPYML+KD NRKSNQ+NL
Sbjct: 361 DAYGDEFEELYTRYEREGRARRTVKAQELWFEILEAQTETGTPYMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTSP E AVCNLASIALP+F+ + G+ G F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASIALPKFITK-------------GTDGILR--F 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL EVT I T NLNKIID+NYYPVE ARRSN+RHRPIG+GVQGLAD FI+L M FES
Sbjct: 466 DHQKLMEVTQIATRNLNKIIDLNYYPVEEARRSNMRHRPIGLGVQGLADAFIMLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA++LN+DIFETIYY A+ S E+A K+GPYET+ SP+S G Q DMW V P S RWD
Sbjct: 526 DEARRLNEDIFETIYYGAMTASMELAKKDGPYETWKGSPISNGEFQFDMWGVTPKSGRWD 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 586 WNALRTQVVEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL ++G+W+ +KN +I +GSVQ IP IP+ LK +YKTVWEIKQ ++DMA DRG
Sbjct: 646 LLRDLVKLGLWNEAMKNNLILANGSVQDIPNIPQHLKDLYKTVWEIKQKHIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV-------- 771
YI QSQSLNIH+ NF K+TS+HF W GLKTGMYYLR++AA DA+KFTV
Sbjct: 706 YICQSQSLNIHIQDANFGKLTSMHFYAWKAGLKTGMYYLRTKAATDAVKFTVVQPQAEPQ 765
Query: 772 -DTSVFKEKP-EKP------------------ELVVDDETKMAQVVCSLTNREECMACGS 811
+ ++ + P EKP V + E A + CSL + E C CGS
Sbjct: 766 LEPAMAETAPVEKPLDYVGYAKEHAAQASAQAPQVSEAELAYAAMQCSLDDPEGCEMCGS 825
>gi|348672398|gb|EGZ12218.1| hypothetical protein PHYSODRAFT_246827 [Phytophthora sojae]
Length = 788
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/812 (65%), Positives = 651/812 (80%), Gaps = 25/812 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQE V FDKITAR+ KL YGL+ ++ D + +SQKV AGVY GVTTS+LDELA
Sbjct: 1 MYVIKRDGRQEDVKFDKITARITKLCYGLNPDYVDAIKISQKVVAGVYPGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +T HPD++ LAARIAVSNLHKNT K FS+ I+ + + +E++G APLIADD+
Sbjct: 61 AETAAYQSTQHPDFSKLAARIAVSNLHKNTNKVFSDNIEVFHKNIHEKTGAAAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+M++ L+S II+DRDF+YDYFGFKTLER YL +V GKVVERPQ M+MRV++GIHK
Sbjct: 121 YEIVMQHKDELNSAIIHDRDFEYDYFGFKTLERGYLFRVNGKVVERPQQMIMRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI +A++TY +MSQ++FTHA+PTLFNAGTPRPQLSSCFL+ M+DDSIEGIY+TLK+CA
Sbjct: 181 SDIKAALETYELMSQKFFTHATPTLFNAGTPRPQLSSCFLLAMQDDSIEGIYDTLKQCAC 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+HNIRAT SYIRGTNG+SNGI+PMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKWAGGIGISMHNIRATNSYIRGTNGSSNGIIPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHG E HRARDLFYALWVPDLFM+RV+ NG+WSLFCPNEA GL
Sbjct: 301 LEPWHADVFEFLDLRKNHGNELHRARDLFYALWVPDLFMKRVEANGKWSLFCPNEAPGLY 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFE LY YE+EG+A+K + AQ LWF IL +QIETG P+ML+KD NRKSNQQNL
Sbjct: 361 ECWGEEFETLYEKYEKEGRARKTINAQQLWFAILDAQIETGVPFMLYKDAANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLC E++EYTSP E AVCNLAS+ALP+FV E F
Sbjct: 421 GTIRSSNLCCEVMEYTSPDEVAVCNLASVALPKFVEEG--------------------VF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D++KL EVT ++T NLNK+IDVNYYPV AR+SN+RHRPIGIGVQGLAD FIL+ AFES
Sbjct: 461 DYQKLYEVTKVITRNLNKVIDVNYYPVAEARKSNMRHRPIGIGVQGLADAFILMNFAFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA++LNK IFETIYY A++TS EIA + GPYET+ SP SKGI Q DMW V P SD W+
Sbjct: 521 EEARELNKKIFETIYYAAMETSMEIAKELGPYETFQGSPASKGIFQFDMWGVTPSSDLWN 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K+G+RNSLLVAPMPTAST+QILGNNE EPYTSN+Y+RRVL+GEF +VNK+
Sbjct: 581 WAALKENVIKHGLRNSLLVAPMPTASTAQILGNNESIEPYTSNMYNRRVLAGEFTIVNKY 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ +L E+GIW+P ++N+I+ D GSVQK+ IP+ +K YKTVWEIKQ ++D++ DRG
Sbjct: 641 LMKELIELGIWTPDVRNQILNDGGSVQKVKAIPDHVKEKYKTVWEIKQKAVLDLSADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQSLNIH+ P K+TS+HF W +GLKTGMYY+R R ADAIKFTVD +
Sbjct: 701 YICQSQSLNIHIADPTISKLTSMHFYAWKKGLKTGMYYMRGRPKADAIKFTVDKQGLDLQ 760
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
P P ET V + + +EC+ CG+
Sbjct: 761 PATPAPAPQTET----VARAGDDEDECLVCGA 788
>gi|313675914|ref|YP_004053910.1| ribonucleoside-diphosphate reductase subunit alpha [Marivirga
tractuosa DSM 4126]
gi|312942612|gb|ADR21802.1| ribonucleoside-diphosphate reductase, alpha subunit [Marivirga
tractuosa DSM 4126]
Length = 826
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/841 (64%), Positives = 662/841 (78%), Gaps = 45/841 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKRDGR+E V FDKITAR++KL YGL + P+ V++KV G+Y GVTT +LD LA
Sbjct: 1 MLVVKRDGRRETVKFDKITARIEKLCYGLDLNYIQPIDVARKVINGIYDGVTTQELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDY+ L+ARIA+SNLHK T KSFS T+K +Y + + ++G APL++ +
Sbjct: 61 AETAASMTVKHPDYSKLSARIAISNLHKTTSKSFSNTMKRLYTYVDAKTGQNAPLLSTET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y II K+AA LDS IIYDRDF YD+FGFKTLERSYL+KV GK+VERPQHMLMRV+IGIH
Sbjct: 121 YGIIKKHAAQLDSAIIYDRDFGYDFFGFKTLERSYLMKVDGKIVERPQHMLMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAIKTY++MS++WFTHA+PTLFNAGTP+PQLSSCFL+ +++DSI+GIY+TLK+ A
Sbjct: 181 EDIESAIKTYNLMSEKWFTHATPTLFNAGTPKPQLSSCFLLTIQEDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI+GT G SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTGGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL+LKKNHGKEE RARDLFYA+W+ DLFM+RV+ N +W+LF PNEASGL
Sbjct: 301 LEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMSDLFMKRVEANAEWTLFDPNEASGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G +FEKLY YEREGK +K V+AQ LWFEIL SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 361 EAYGDDFEKLYEKYEREGKGRKTVKAQELWFEILESQIETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLASIALP FV+E + + +FF
Sbjct: 421 GTIKSSNLCTEILEYTSKDEVAVCNLASIALPMFVQEDE---------------NGQKFF 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL ++T T NLN++IDVNYYPVE AR SN+RHRPIG+GVQGLAD F+LL F+S
Sbjct: 466 DHDKLYDITYTATVNLNRVIDVNYYPVEEARTSNMRHRPIGLGVQGLADAFMLLRYPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
E+++LNK+IFETIY+ A+ S ++A KEGPYETY SPVSKGI Q DMWNV P+DRWDW
Sbjct: 526 EESRKLNKEIFETIYFAAMTASKDLAVKEGPYETYKGSPVSKGIFQFDMWNVEPTDRWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEFVVVNKHL
Sbjct: 586 TTLKQEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFVVVNKHL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL E G+W+ +KNK+I +GSVQ I +IP+++K +YKTVWEI Q ++DMA DRG Y
Sbjct: 646 MRDLIERGMWNDNMKNKLIAANGSVQDIADIPQDIKELYKTVWEISQKAIIDMAADRGAY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-K 779
I QSQS+N+ M PNF K+TS+HF W +GLKTGMYYLRS+AA AI+FTVD S E +
Sbjct: 706 ICQSQSMNLFMQDPNFGKMTSMHFYAWKKGLKTGMYYLRSKAATSAIQFTVDKSQLNEPQ 765
Query: 780 PEK--------------------------PELVVDDE---TKMAQVVCSLTNREECMACG 810
PE+ P+ +D+ K AQV CSL N ++C CG
Sbjct: 766 PEQKPQDITQSTDTKVNRPQNSVGTQGQGPQANAEDDLAALKAAQVACSLDNPDDCEMCG 825
Query: 811 S 811
S
Sbjct: 826 S 826
>gi|408672794|ref|YP_006872542.1| ribonucleoside-diphosphate reductase, alpha subunit [Emticicia
oligotrophica DSM 17448]
gi|387854418|gb|AFK02515.1| ribonucleoside-diphosphate reductase, alpha subunit [Emticicia
oligotrophica DSM 17448]
Length = 823
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/837 (65%), Positives = 663/837 (79%), Gaps = 40/837 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E+V FDKITAR+++L YGL PV V+ KV AG+Y GV+TS+LD LA
Sbjct: 1 MFVIKRDGRRESVKFDKITARIERLCYGLEPAFVQPVEVAMKVVAGIYDGVSTSELDSLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA LAARIA+SNLHKNT KSFS T+K +Y + + ++G A LIA D
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKNTLKSFSGTMKMLYQYIDPKTGQNASLIAKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++I K+AA LDS IIYDRDF YDYFG+KTLE+SYLLKV GK+VERPQHMLMRV++GIH
Sbjct: 121 WKVIQKHAALLDSAIIYDRDFGYDYFGYKTLEKSYLLKVNGKIVERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID ++TY ++S+RWFTHA+PTLFNAGTP+PQLSSCFL+ +K+DSI GIY+TL + A
Sbjct: 181 EDIDRVLETYELLSERWFTHATPTLFNAGTPKPQLSSCFLLTIKEDSITGIYDTLGQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+++HN+RATGSYI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLAIHNVRATGSYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIFEFL+L+KNHGKEE RARDLFYALW+ DLFM+RV+ N WSLFCPNEA GL+
Sbjct: 301 IEPWHADIFEFLDLRKNHGKEELRARDLFYALWISDLFMKRVEANDTWSLFCPNEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFEKLY YE EGKA+K ++AQ+LWF I+ SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 361 DCYGEEFEKLYEKYELEGKARKTIKAQDLWFAIMESQIETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT+P E AVCNLASIALP++ IV + F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKY--------------IVKDEKTGFMKF 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D EKL EVT ++T+NLNK+IDVNYYPV A RSNLRHRPIG+GVQGLADTFI L M FES
Sbjct: 467 DHEKLYEVTKVITKNLNKVIDVNYYPVIEAERSNLRHRPIGLGVQGLADTFITLRMPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA++LNK+IFETIY+ A+++S E+A +GPY T+ SP+S+GI Q DMW V P S RW+
Sbjct: 527 DEARRLNKEIFETIYFAAMESSMEMAMADGPYSTWEGSPISQGIFQFDMWGVSPDSGRWN 586
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ + +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 587 WEELREKVKTHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 646
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL ++G+W+ T+KNK+I +GSVQ I EIP+ LK +Y+T WEIKQ T++DMA DRG
Sbjct: 647 LLKDLVKIGLWNDTMKNKLIAANGSVQGIAEIPQNLKDLYRTAWEIKQKTIIDMAADRGA 706
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD------- 772
+I QSQSLNI M+ NF K+TS+HF W GLKTGMYYLR++AA+DA+KFTVD
Sbjct: 707 FICQSQSLNIFMENANFGKLTSMHFYAWKAGLKTGMYYLRTKAASDAVKFTVDRQAIAEV 766
Query: 773 ---TSVFKEKP---------------EKPELVVDDETKMAQVVCSLTNREECMACGS 811
TS EKP + E + A + CSL + E C CGS
Sbjct: 767 VPATSAVSEKPLDYVKYAEEQTAKATAAATFSSEAEYQYAAMQCSLDDPEGCEMCGS 823
>gi|406663813|ref|ZP_11071832.1| Ribonucleoside-diphosphate reductase 1 subunit alpha [Cecembia
lonarensis LW9]
gi|405551927|gb|EKB47524.1| Ribonucleoside-diphosphate reductase 1 subunit alpha [Cecembia
lonarensis LW9]
Length = 797
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/812 (66%), Positives = 648/812 (79%), Gaps = 16/812 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKIT R++ L GL + P+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCNGLDGRYIHPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A++T HPDYA LAARIA+SNLHK T +SFS T+K +Y H N+++G A LIA D+
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTHINQKTGDNAALIAPDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ K+AA LD I Y RDFDYDYFGFKTLERSYL+K+ GKVVERPQHMLMRV++GIHK
Sbjct: 121 YGVVKKHAAKLDEVIDYQRDFDYDYFGFKTLERSYLIKLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TYH++SQ+WFTHA+PTLFNAGTP+PQLSSCFL+ MK+DSI+GIY+TLK+CA
Sbjct: 181 EDIDAAIETYHLLSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHHVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ +FL LK+NHGKEE RARDLFYA+W+PDLFM+RV+ N +WSLFCPNEA GLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNDEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC G EFEKLY YEREGKA++ ++AQ LWFEIL SQIETGTPYML+KD+ N+KSNQQNL
Sbjct: 361 DCHGEEFEKLYEKYEREGKARETIKAQELWFEILESQIETGTPYMLYKDSANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSP E AVCNLASIALP+FV G G K +F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFV-------------ATGKDGKK--YF 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL EVT + T NLNK+IDVNYYPVE ARRSN RHRPIG+GVQGLAD FI+L M F+S
Sbjct: 466 DHQKLYEVTKVATRNLNKVIDVNYYPVEEARRSNFRHRPIGLGVQGLADAFIMLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA+ LN+DIFETIYY +++TS E+A +G YETY SP SKGI Q DMW V P S RW
Sbjct: 526 DEAKGLNEDIFETIYYASMETSMELAKVQGTYETYEGSPASKGIFQFDMWGVTPKSGRWA 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WNELKEKVKKFGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL +G+W+ T KN++I +GSVQ IP IP+ +K IYKTVWEI Q ++DMA +RG
Sbjct: 646 LMRDLINLGLWNDTTKNRLIAANGSVQNIPGIPQNIKDIYKTVWEISQRIIIDMATERGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQS+N+ M PNF K+TS+HF W +GLKTGMYYLRS+AAA AI+FTVD S +
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAASAIQFTVDKSALETD 765
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ K + CSL + E C CGS
Sbjct: 766 KTASAVDPSRNQKQDAIACSLDDPEGCEMCGS 797
>gi|255037023|ref|YP_003087644.1| ribonucleoside-diphosphate reductase subunit alpha [Dyadobacter
fermentans DSM 18053]
gi|254949779|gb|ACT94479.1| ribonucleoside-diphosphate reductase, alpha subunit [Dyadobacter
fermentans DSM 18053]
Length = 814
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/832 (64%), Positives = 667/832 (80%), Gaps = 39/832 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E+V FDK+TAR++KLSYGL + PV V++KV +G+Y GVTT++LD LA
Sbjct: 1 MYVIKRDGRRESVKFDKVTARIEKLSYGLDATYVQPVEVAKKVVSGIYDGVTTAELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA LAAR+A+SNLHKNT KSFS T+K +Y + + ++G A LI+ ++
Sbjct: 61 AETAASMTTKHPDYAILAARVAISNLHKNTLKSFSATMKRLYTYIDSKTGENASLISREV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+I +NA+ LDS IIYDRD+ YDYFG+KTLE+SYLLKV+GK+VERPQHMLMRV+IGIH+
Sbjct: 121 YEVIRQNASLLDSTIIYDRDYSYDYFGYKTLEKSYLLKVEGKIVERPQHMLMRVAIGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+ +AI+TYH++S++WFTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSI GIY+TLK CA+
Sbjct: 181 EDVQAAIETYHLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKEDSINGIYDTLKNCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RATG+YI+GTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHDVRATGTYIKGTNGQSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIF+FL+LKKNHGKEE RARDLFYALW+PDLFM+RV+ N WSLFCP+E GLA
Sbjct: 301 IEPWHSDIFDFLDLKKNHGKEEQRARDLFYALWIPDLFMKRVEANDTWSLFCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D EFEKLY YEREG+A+K ++AQ+LWF I+ SQIETGTPYML+KD N KSNQQNL
Sbjct: 361 DTHSEEFEKLYEQYEREGRARKTIKAQDLWFAIMESQIETGTPYMLYKDHANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT+P E AVCNLASIALP+FV + G+ G + F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVEQ-------------GADGFMH--F 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL E+T +VT NLNKIID+N+YPV A +SN RHRPIGIGVQGLAD F ++ M F+S
Sbjct: 466 DHQKLYEITKVVTRNLNKIIDLNFYPVPEAEKSNKRHRPIGIGVQGLADAFCMMRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA++LNKDIFETIYY +++ S E+A + GPYET+ SP+S+G+ Q DMWNV P S RW+
Sbjct: 526 DEARRLNKDIFETIYYGSMEASMELAMQNGPYETWAGSPISQGVFQFDMWNVTPESKRWN 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + +NGVRNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEFVVVNK+
Sbjct: 586 WEKLRKEVVQNGVRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFVVVNKY 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL +G+WS +KN ++ GSVQ IP IP+ +K +YKT WEIKQ +L+DM+ DRG
Sbjct: 646 LLKDLVRLGLWSEEMKNNLVRASGSVQAIPNIPQNIKDLYKTAWEIKQRSLLDMSADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD------- 772
YI QSQSLNI M++ NF K+TS+HF W +GLKTGMYYLR+RAA+D ++FTV
Sbjct: 706 YICQSQSLNIFMEEANFGKLTSMHFYAWKKGLKTGMYYLRTRAASDPVQFTVSKQAEPQL 765
Query: 773 ---TSVFKEKP----------EKPELVVDDETKMAQVVCSLTNREECMACGS 811
T+V EK KP D+ + M CSL + E C ACGS
Sbjct: 766 EPATAVVAEKELNYVQYAEEHAKPAAPRDNRSDMQ---CSLDDPEGCEACGS 814
>gi|167524415|ref|XP_001746543.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774813|gb|EDQ88439.1| predicted protein [Monosiga brevicollis MX1]
Length = 784
Score = 1149 bits (2972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/811 (65%), Positives = 654/811 (80%), Gaps = 27/811 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR E V FDKIT R++KLS+GL+ ++ +PV +++KV AGVY GV T+QLD+LA
Sbjct: 1 MYVVKRDGRHEPVLFDKITNRVEKLSFGLNRDYVEPVEITKKVMAGVYSGVHTTQLDQLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+ TT HPDYA LAARI+VSNLHK T KSFS+T+K ++ + N ++G APL++D+
Sbjct: 61 AETAASFTTRHPDYAILAARISVSNLHKQTNKSFSQTMKALHEYVNPKTGKLAPLVSDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ +I KN LDS +IYDRDF++++FGFKTLERSYLLK+ G+VVERPQHM MRVS+GIH
Sbjct: 121 WAVIEKNKELLDSHVIYDRDFNFNFFGFKTLERSYLLKINGQVVERPQHMFMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++D+ ++TY+ MSQ FTHASPTLFN+GTP QLSSCFLV MKDDSI+GIY+TL CA+
Sbjct: 181 DNLDAVLETYNHMSQGLFTHASPTLFNSGTPLAQLSSCFLVSMKDDSIKGIYDTLTTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+S+HN+RA+GSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKTAGGVGLSIHNVRASGSYIAGTNGESNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+LKKNHG +E RARDLFYALWVPDLFM+RV+ N QW+L CP+E GLA
Sbjct: 301 LEPWHADVFEFLDLKKNHGSDELRARDLFYALWVPDLFMKRVERNEQWTLMCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+GAEFE LY YEREG+ +K + AQ LWF IL SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 361 DCYGAEFEALYERYEREGRGRKTIDAQKLWFAILESQTETGTPYMLYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEI+EY++P E AVCNLAS+ALP+FV E R +
Sbjct: 421 GTIRCSNLCTEIVEYSAPDEVAVCNLASLALPKFVNE------------------DTRTY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFE+L +V IVT NLN+IID+NYYPV A+ SN+RHRPIGIGVQGLAD FIL+ + F+S
Sbjct: 463 DFERLHDVVKIVTRNLNRIIDINYYPVPEAKNSNMRHRPIGIGVQGLADAFILMRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LNK IFETIY+ AL+ S EIA ++GPY+TY SPVS+G LQ DMW + P+D+WDW
Sbjct: 523 PEARDLNKRIFETIYHAALEASCEIAQRDGPYKTYEGSPVSQGTLQYDMWGITPTDQWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTAST+QILGNNE EPYTSNIYSRRVLSG+F VVNKHL
Sbjct: 583 AALKAKIAEHGVRNSLLVAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQVVNKHL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+GIWS IK +II ++GS+Q I IP+++K +YKTVWE+ Q TL+D+A DRG +
Sbjct: 643 LKDLVELGIWSNDIKQQIILNNGSIQAIAGIPDDIKALYKTVWELSQRTLIDLAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS N+HM +PNF K+TS+HF W +GLKTGMYYLR+RAAA AIKFT+D + KE+
Sbjct: 703 IDQSQSFNVHMGEPNFGKLTSMHFYAWKQGLKTGMYYLRTRAAASAIKFTIDATKAKEQQ 762
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
EK E A +VCSLTN E C+ C +
Sbjct: 763 EKEE---------AAMVCSLTNPEGCLMCSA 784
>gi|110636873|ref|YP_677080.1| ribonucleoside diphosphate reductase subunit alpha [Cytophaga
hutchinsonii ATCC 33406]
gi|110279554|gb|ABG57740.1| ribonucleoside diphosphate reductase, alpha subunit [Cytophaga
hutchinsonii ATCC 33406]
Length = 794
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/812 (66%), Positives = 654/812 (80%), Gaps = 23/812 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKIT+R+++L YGL + DP V+++V G+Y GVTT +LD LA
Sbjct: 1 MLVLKRDGRRESVKFDKITSRIERLCYGLDMNYVDPTSVAKRVIDGLYDGVTTEELDHLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA+LAARIAVSNLHK T KSF+ T+K +Y + + ++G A +I++++
Sbjct: 61 AETAASMTTKHPDYATLAARIAVSNLHKKTSKSFANTMKRLYTYVDPKTGENASMISNEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE I KNAA LDS IIYDRD+ YDYFGFKTLE+SYLLKV GK+VERPQHMLMRVS GIH
Sbjct: 121 YEFIRKNAAILDSAIIYDRDYGYDYFGFKTLEKSYLLKVDGKIVERPQHMLMRVSCGIHS 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY++MS+RWFTHA+PTLFN+GTP+PQLSSCFL+ +DDSI+GIYETLK+CA
Sbjct: 181 GDIDAAIETYNLMSERWFTHATPTLFNSGTPKPQLSSCFLLTTQDDSIDGIYETLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI+GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIKGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYA+W+ DLFM+RV+ NG WSLFCP+EA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEMRARDLFYAMWISDLFMKRVEENGDWSLFCPHEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G +FE LY YE+EG+A+K ++AQ LWF IL +Q+ETGTPYML+KD NRKSNQ+NL
Sbjct: 361 DCYGKDFEALYEKYEKEGRARKTIKAQELWFAILEAQVETGTPYMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+E+TSP E AVCNLAS+ALP+FV N F
Sbjct: 421 GTIKSSNLCTEIMEFTSPEEVAVCNLASLALPKFV--------------------INGKF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL +VT + T+NLNKIIDVNYYPV A RSN RHRPIG+GVQGLAD FILL M FES
Sbjct: 461 DHQKLYDVTYVATKNLNKIIDVNYYPVPEAERSNKRHRPIGLGVQGLADAFILLRMPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA+QLN DI ETIYY A+ S ++A K GPYET+ SPVSKGI Q DMW V P S R+D
Sbjct: 521 DEAKQLNIDIHETIYYAAMTASKDLAEKLGPYETFKGSPVSKGIFQFDMWGVTPASGRYD 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 581 WEALKREVKKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL ++ +W +KN++I +GSVQ I IP+ +K +YKT WEIK TL+DM+ DRG
Sbjct: 641 LLKDLIKLNLWDDKMKNRLIEMNGSVQNINNIPQNIKDLYKTAWEIKGKTLIDMSADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD--TSVFK 777
YI QSQSLNI M + NF K+TS+HF W++GLKTGMYYLR+++AA+AI+FTV+ V
Sbjct: 701 YICQSQSLNIFMPEANFGKLTSMHFYAWNKGLKTGMYYLRTKSAANAIQFTVEKQAEVQL 760
Query: 778 EKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ +VD E K + CSL N E C +C
Sbjct: 761 APGTTDQSIVDAEKKAKDMACSLDNPEGCESC 792
>gi|301112881|ref|XP_002998211.1| ribonucleoside-diphosphate reductase large subunit [Phytophthora
infestans T30-4]
gi|262112505|gb|EEY70557.1| ribonucleoside-diphosphate reductase large subunit [Phytophthora
infestans T30-4]
Length = 793
Score = 1148 bits (2969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/813 (65%), Positives = 650/813 (79%), Gaps = 22/813 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR+E V FDKITAR+ KL YGL+ ++ D + +SQKV AGVY GVTTS+LDELA
Sbjct: 1 MYVVKRDGRREDVKFDKITARITKLCYGLNPDYVDAIKISQKVVAGVYPGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +T HPD++ LAARIAVSNLHKNT K FS+ I+ + + +E++G APLIADD+
Sbjct: 61 AETAAYQSTQHPDFSKLAARIAVSNLHKNTNKVFSDNIEVFHKNAHEKTGAAAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+M++ L+S II+DRDF+YDYFGFKTLER YL +V GKVVERPQ M++RV++GIHK
Sbjct: 121 YEIVMQHKDELNSAIIHDRDFEYDYFGFKTLERGYLFRVNGKVVERPQQMILRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI SA++TY +MSQ++FTHA+PTLFNAGTPRPQLSSCFL+ M+DDSIEGIY+TLK+CA
Sbjct: 181 SDITSALETYELMSQKFFTHATPTLFNAGTPRPQLSSCFLLAMQDDSIEGIYDTLKQCAC 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+HNIRAT SYIRGTNG+SNGI+PMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKWAGGIGISMHNIRATNSYIRGTNGSSNGIIPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHG E HRARDLFYALWVPDLFM+RV+ NG+WSLFCPNEA GL
Sbjct: 301 LEPWHADVFEFLDLRKNHGNELHRARDLFYALWVPDLFMKRVEANGKWSLFCPNEAPGLY 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFE LY YE EG+A+K + AQ LWF IL +QIETG P+ML+KD NRKSNQQNL
Sbjct: 361 ECWGDEFETLYEKYETEGRARKTINAQQLWFAILDAQIETGVPFMLYKDAANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLC E++EYTSP E AVCNLAS+ALP+FV ++ F
Sbjct: 421 GTIRSSNLCCEVMEYTSPDEVAVCNLASVALPKFV--------------------EDAVF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+ KL EV ++T NLNK+IDVNYYPV AR+SN+RHRPIGIGVQGLAD FIL+ FES
Sbjct: 461 DYRKLYEVVKVITRNLNKVIDVNYYPVAEARKSNMRHRPIGIGVQGLADAFILMNYPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
P+AQ+LNK+IFETIY+ A++TS EIA + GPYET+ SP SKGI Q DMW V P S W+
Sbjct: 521 PQAQELNKNIFETIYFAAMETSMEIAVELGPYETFQGSPASKGIFQFDMWGVTPQSGLWN 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+D + K+G+RNSLLVAPMPTAST+QILGNNE EPYTSN+Y+RRVL+GEF +VNKH
Sbjct: 581 WAALKDDVIKHGLRNSLLVAPMPTASTAQILGNNESIEPYTSNMYNRRVLAGEFTIVNKH 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ +L E+GIW+P ++N+I+ D GSVQKI IPE++K YKTVWEIKQ ++D++ DRG
Sbjct: 641 LMKELIELGIWTPEVRNQILNDGGSVQKIKTIPEDVKEKYKTVWEIKQKAVLDLSADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQSLNIH+ P K+TS+HF W +GLKTGMYY+R R ADAI+FTVD +
Sbjct: 701 YICQSQSLNIHIADPTISKLTSMHFYAWKKGLKTGMYYMRGRPKADAIQFTVDKQGIDLQ 760
Query: 780 PEKPELVVDDETKMAQVVCSLTNRE-ECMACGS 811
K E T A+ V + E EC+ CG+
Sbjct: 761 RAKEEATKTAPTPAAETVTRAGDDEDECLVCGA 793
>gi|328770641|gb|EGF80682.1| hypothetical protein BATDEDRAFT_16482 [Batrachochytrium
dendrobatidis JAM81]
Length = 796
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/809 (65%), Positives = 649/809 (80%), Gaps = 15/809 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKIT+R+ KL YGL + DP V+QKV GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRRERVAFDKITSRINKLCYGLDMNYVDPAEVAQKVVTGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A +TT HPDYA LAARIA+SNLHK TKK FS ++D+Y + N ++ +P+I+
Sbjct: 61 AETTAYLTTKHPDYAILAARIAISNLHKETKKQFSSVMQDLYEYVNPKNNKHSPMISKTT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++ I+KNA L+S IIYDRDF+Y++FGFKTLERSYLL++ K ERPQHMLMRV++GIH
Sbjct: 121 FDCILKNADRLNSAIIYDRDFNYNFFGFKTLERSYLLRINRKTAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+++ I+TY++MS+++FTHASPTLFNAGTP PQ+SSCFL+ ++DDSIEGIY TLK CA+
Sbjct: 181 DDVEAVIETYNLMSEKYFTHASPTLFNAGTPNPQMSSCFLLTIEDDSIEGIYSTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IR++GSYI GTNG SNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHKIRSSGSYIAGTNGLSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KN GKEE+RARDLFYALW+PD+FM RV++NG WSLFCP EA GL
Sbjct: 301 LEPWHADVFEFLDLRKNTGKEENRARDLFYALWIPDMFMRRVESNGDWSLFCPAEAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EF+ LY YEREG+A+K+++AQ LW+ IL SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 DVWGDEFDALYEKYEREGRARKIIKAQKLWYAILDSQSETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNLAS+ALP FV I + G+ F
Sbjct: 421 GTIKCSNLCTEIVEYSSPDEVAVCNLASLALPNFV-------------IKDTTGAP--VF 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+K+ + T I T NLNKII++NYYPVE A+RSN+RHRPIG+GVQGLADTFI + M F+S
Sbjct: 466 DFDKMIDTTKIATYNLNKIINLNYYPVEQAKRSNMRHRPIGLGVQGLADTFIKMRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFE IY+ AL S E+A ++GPYETY SP+SKGI+QPDMWNV SD++DW
Sbjct: 526 PEAKKLNIQIFEAIYFAALTASCELAKRDGPYETYSGSPMSKGIIQPDMWNVKVSDQFDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+K GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY RRVLSGEF +VN+HL
Sbjct: 586 PTLRANIAKYGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYIRRVLSGEFQIVNQHL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+G+W+ ++KN+II +GS+Q IP IP +LK IYKTVWEI Q ++DMA DRG +
Sbjct: 646 LKDLTELGLWNESMKNRIISANGSIQNIPSIPAQLKAIYKTVWEISQKVIIDMAADRGAF 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ + N+ K+TS+HF W +GLKTGMYYLRSR AADAIKFTVD +
Sbjct: 706 IDQSQSLNIHLAEVNYGKLTSMHFYGWHKGLKTGMYYLRSRPAADAIKFTVDKQSLTQGA 765
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMAC 809
E VV M ++CSL NR+ CM+C
Sbjct: 766 EDKNNVVASVNNMTDMLCSLENRDACMSC 794
>gi|387789963|ref|YP_006255028.1| ribonucleoside-diphosphate reductase subunit alpha [Solitalea
canadensis DSM 3403]
gi|379652796|gb|AFD05852.1| ribonucleoside-diphosphate reductase, alpha subunit [Solitalea
canadensis DSM 3403]
Length = 788
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/812 (66%), Positives = 653/812 (80%), Gaps = 25/812 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR E+V FDKITAR++KLSYGL + H D + V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGRTESVKFDKITARIEKLSYGLDSNHVDSIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++T HPDYA LA+RIAVSNLHKNT+KSFS+T++ +YN+ + ++GL A L++DD+
Sbjct: 61 AETAASLTVKHPDYALLASRIAVSNLHKNTEKSFSKTMERLYNYIDPKTGLNAQLLSDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
EII +NA LDS IIYDRDF +DYFGFKTLERSYLLK+ G+V ERPQHM MRV++GIHK
Sbjct: 121 IEIIRQNADTLDSNIIYDRDFAFDYFGFKTLERSYLLKLNGRVAERPQHMYMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DIDS IKTY++MS++WFTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 181 EDIDSVIKTYNLMSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL+L+KNHGKEE RARDLFYALW+PDLFM+RV++NG+WSLFCP+EA GL
Sbjct: 301 LEPWHADIFDFLDLRKNHGKEELRARDLFYALWIPDLFMKRVESNGEWSLFCPHEAPGLY 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +FE LY YE+EGKA+K V+AQ LWF I+ SQIETGTPYML+KD N+KSNQQNL
Sbjct: 361 DTYGDDFEALYERYEKEGKARKTVKAQELWFAIMDSQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYT+ E AVCNLASI+LP+FV N F
Sbjct: 421 GTIKSSNLCTEIMEYTAEDEVAVCNLASISLPKFV--------------------INGEF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL EVT T NLNKIID NYYPVE AR SNLRHRP+G+G+QGLAD FI+L FES
Sbjct: 461 DHQKLYEVTYQATLNLNKIIDGNYYPVEEARNSNLRHRPVGLGIQGLADVFIMLRHPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LN++I ETIY+ AL S ++A +GPYETY SP SKGILQ DMWNV PS RWD+
Sbjct: 521 AEAQSLNREIAETIYFAALSASKDLAKVDGPYETYEGSPSSKGILQYDMWNVTPSKRWDF 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLLVAPMPTASTSQI GNNECFEPYTSNIY RRVLSGEF+VVNKHL
Sbjct: 581 DGLKKEIKKYGIRNSLLVAPMPTASTSQIFGNNECFEPYTSNIYVRRVLSGEFIVVNKHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + +W +KNKII +GS+Q I EIP+ +K +YKTVWEIKQ TL+DMA DRG Y
Sbjct: 641 LKDLVALNLWDGQMKNKIIAAEGSIQDIKEIPQHIKELYKTVWEIKQRTLIDMAADRGAY 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-K 779
QSQSLN+ + PN K+TS+HF W +GLKTGMYYLR++AA A+KFTV+ K+ +
Sbjct: 701 TCQSQSLNLFVQSPNNAKLTSMHFYAWKKGLKTGMYYLRTQAANAAVKFTVEKQAEKQLE 760
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
P V++E + VC++ E C+ C +
Sbjct: 761 PMVQHTGVEEE--ITGPVCTM--EEGCVTCSA 788
>gi|326797772|ref|YP_004315591.1| ribonucleoside-diphosphate reductase subunit alpha
[Sphingobacterium sp. 21]
gi|326548536|gb|ADZ76921.1| ribonucleoside-diphosphate reductase, alpha subunit
[Sphingobacterium sp. 21]
Length = 792
Score = 1146 bits (2965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/816 (66%), Positives = 658/816 (80%), Gaps = 29/816 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR E+V FDKITAR++KL YGL+ + DP+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MYVIKRDGRSESVKFDKITARIEKLCYGLNPDLVDPIDVARKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++TT HPDYA LA+RIAVSNLHKNT KSFSET+ +Y++ + ++G APLIADD+
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTVKSFSETMSLLYHYIDPKTGKPAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+I NA LDS IIYDRDF +DYFGFKTLE+SYLLK+ GK+ ERPQH+ MRV++GIHK
Sbjct: 121 YEVIQANAMELDSHIIYDRDFSFDYFGFKTLEKSYLLKLNGKIAERPQHLFMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S IKTY ++S+RWFTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 181 HDIESVIKTYDLLSERWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATG+YI GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGAYISGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+++F++L+KNHGKEE RARDLF ALWVPDLFM+RV+ NG+WSLF P+EA GLA
Sbjct: 301 LEPWHADVYDFIDLRKNHGKEELRARDLFLALWVPDLFMKRVEENGEWSLFSPDEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+C G FEKLY YEREG+A+K+V+AQ+LWF IL +QIETGTPY+L+KD N KSNQQNL
Sbjct: 361 ECHGEAFEKLYEQYEREGRARKIVKAQDLWFAILDAQIETGTPYLLYKDAANGKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTS E AVCNLAS+ALPR+V N F
Sbjct: 421 GTIKSSNLCTEIIEYTSADEVAVCNLASLALPRYV--------------------DNGEF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL ++T VT NLN+IID NYYPV+ AR SNLRHRP+G+GVQGLADTFIL+ M FES
Sbjct: 461 DHQKLFDITYQVTINLNRIIDNNYYPVDEARNSNLRHRPVGLGVQGLADTFILMRMPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
A+QLNKDIFETIY+ A+ S ++A KEGPYE++ SP+S+G Q D+WNV P S RWD
Sbjct: 521 EAAKQLNKDIFETIYFAAMTASKDLAVKEGPYESFKGSPLSQGKFQFDLWNVKPDSGRWD 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFV+VNKH
Sbjct: 581 WEGLRKEIKKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVIVNKH 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL E+G+W+ +KN+II +GS+Q I EIP ++K +YKTVWEIK ++DMA DRG
Sbjct: 641 LLRDLVELGLWNNEMKNRIIAANGSIQDINEIPADIKELYKTVWEIKMRNIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+I QSQSLN+ ++ P K+TS+HF W +GLKTGMYYLR++AA A+KFTV+ K
Sbjct: 701 FICQSQSLNLFVNTPTTAKLTSMHFYAWKKGLKTGMYYLRTQAATQAVKFTVENQAGKNM 760
Query: 780 ----PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
P K E V DD A VCS+ E C+ CGS
Sbjct: 761 EPVIPAKIESVPDDIPTGA--VCSM--EEGCITCGS 792
>gi|410027778|ref|ZP_11277614.1| ribonucleoside-diphosphate reductase subunit alpha [Marinilabilia
sp. AK2]
Length = 799
Score = 1146 bits (2964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/814 (66%), Positives = 646/814 (79%), Gaps = 18/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKIT R++ L GL + P+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCNGLDGRYIHPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A++T HPDYA LAARIA+SNLHK T +SFS T+K +Y H N ++G A LIA D+
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTHINPKTGDNAALIAPDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ ++AA LD I Y RDFDYDYFGFKTLERSYL+K+ GKVVERPQHMLMRV+IGIHK
Sbjct: 121 YGVVKQHAAKLDEVIDYQRDFDYDYFGFKTLERSYLIKLDGKVVERPQHMLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TYH++SQ+WFTHA+PTLFNAGTP+PQLSSCFL+ MK+DSI+GIY+TLK+CA
Sbjct: 181 EDIDAAIETYHLLSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FAVY
Sbjct: 241 ISQSAGGIGLSIHHVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ +FL LK+NHGKEE RARDLFYA+W+PDLFM+RV+ N +WSLFCPNEA GLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNDEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC G EFEKLY YEREGKA++ ++AQ LWFEIL SQIETGTPYML+KD N+KSNQQNL
Sbjct: 361 DCHGEEFEKLYEKYEREGKARETIKAQELWFEILESQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSP E AVCNLASIALP+FV G G K +F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFV-------------ATGKDGKK--YF 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL EVT + T NLNK+IDVNYYPVE ARRSN RHRPIG+GVQGLAD FI+L M F+S
Sbjct: 466 DHQKLYEVTKVATRNLNKVIDVNYYPVEEARRSNFRHRPIGLGVQGLADAFIMLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA+ LN+DIFETIY+ +++TS E+A +G YETY SP SKG Q D+W V P S RW
Sbjct: 526 DEAKGLNEDIFETIYFASMETSMELAKIQGTYETYEGSPASKGQFQFDLWGVTPKSGRWA 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WNELKEKVKKYGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL +G+W+ +KN++I +GSVQ IP IP+ +K IYKTVWEI Q ++DMA DRG
Sbjct: 646 LMRDLINLGLWNDNMKNRLIAANGSVQNIPGIPQNIKDIYKTVWEISQRIIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQS+N+ M PNF K+TS+HF W +GLKTGMYYLRS+AAA AI+FTVD S +
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAASAIQFTVDKSALETD 765
Query: 780 PEKPELVVDDETKMAQ--VVCSLTNREECMACGS 811
VD Q + CSL + E C CGS
Sbjct: 766 KTATATTVDTSRSQKQDAIACSLDDPEGCEMCGS 799
>gi|449017740|dbj|BAM81142.1| ribonucleoside-diphosphate reductase alpha chain [Cyanidioschyzon
merolae strain 10D]
Length = 811
Score = 1145 bits (2961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/824 (65%), Positives = 662/824 (80%), Gaps = 32/824 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVL----VSQKVCAGVYKGVTTSQLDE 58
VVKRDGR++ V FDKITAR+KKL+YGL DP++ V+QKVCAGVY GV TS+LDE
Sbjct: 5 VVKRDGRRQPVKFDKITARIKKLAYGL-----DPLVDVTEVAQKVCAGVYDGVHTSELDE 59
Query: 59 LAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
LAAETAA M+T H DY+ LAARIAVSNLHKNT+KSFS ++ +Y + + ++ APLIA
Sbjct: 60 LAAETAAYMSTRHHDYSILAARIAVSNLHKNTEKSFSAVMERLYAYRSPKTNDPAPLIAS 119
Query: 119 DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI 178
D+ EI+ ++A +D IIYDRDF YDYFGFKTLERSYLL++ GKVVERPQ MLMRV+IGI
Sbjct: 120 DVIEIVRRHAETIDGAIIYDRDFSYDYFGFKTLERSYLLRIDGKVVERPQQMLMRVAIGI 179
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
HK+D+D+A++TY MSQ++FTHASPTLFNAGTPRPQLSSCFL+ M +DSIEGIY+TLK C
Sbjct: 180 HKEDLDAALETYDYMSQKYFTHASPTLFNAGTPRPQLSSCFLLSMTEDSIEGIYDTLKRC 239
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
AVISKSAGGIG+++HNIRAT SYIRGTNG+SNGIVPMLRVFNDTARYVDQGGGKRKGAFA
Sbjct: 240 AVISKSAGGIGLAIHNIRATKSYIRGTNGSSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 299
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
VYLEPWHADIFE+L+LKKNHGKEE RARDLFYALW PDLFM RV+ N QWSLFCPNEA G
Sbjct: 300 VYLEPWHADIFEWLDLKKNHGKEEARARDLFYALWTPDLFMRRVEANEQWSLFCPNEAPG 359
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
LAD WG F++LY YE EG+A++V+ A+ LWF IL SQIETGTPYML+KD CNRKSNQQ
Sbjct: 360 LADVWGDAFDELYQRYEAEGRAREVIPARKLWFSILESQIETGTPYMLYKDHCNRKSNQQ 419
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
NLGTI+ SNLCTEI+EYT+P E AVCNLASIAL +FV D + P
Sbjct: 420 NLGTIRCSNLCTEIVEYTAPDEVAVCNLASIALNKFVVPGDRERGTCP------------ 467
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
F+F++LA VT +VT+NLNKIIDVN+YP+ A+ SNLRHRPIGIGVQGLAD FIL+ M F
Sbjct: 468 VFNFDELAFVTRMVTKNLNKIIDVNFYPIPEAQNSNLRHRPIGIGVQGLADAFILMRMPF 527
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDR 597
ES EA+ LN++IFE IYY+AL+ S E+A ++GPY ++ SP ++G LQ D+WNV P S R
Sbjct: 528 ESDEARALNQEIFECIYYNALQASIELAERDGPYASFEGSPAARGQLQFDLWNVKPTSSR 587
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ I+ +G+RNSLLVAPMPTASTSQILGNNECFEPYTSN+Y+RRVL+GEF VVN
Sbjct: 588 WDWDALKERITLHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNLYTRRVLAGEFTVVN 647
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HL+ DL E+G+W+P +KNKII GS+Q+IPEIP++++ +YKTVWE+ Q L+D+A DR
Sbjct: 648 QHLVRDLQELGLWNPLVKNKIIAHGGSIQQIPEIPQDIRDLYKTVWEVSQRRLLDLAADR 707
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+++ QP K++S+HF W GLKTGMYYLR+R AADAIKFT+D + K
Sbjct: 708 GAFIDQSQSLNVYIAQPTIGKLSSMHFHGWRLGLKTGMYYLRTRPAADAIKFTLDQRILK 767
Query: 778 EK----------PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
E+ P + A + CSL +++C+ACGS
Sbjct: 768 EENHTAVNGSQLPCNLTPRTSAAEQFAALACSLDKKDDCIACGS 811
>gi|284041187|ref|YP_003391117.1| ribonucleoside-diphosphate reductase subunit alpha [Spirosoma
linguale DSM 74]
gi|283820480|gb|ADB42318.1| ribonucleoside-diphosphate reductase, alpha subunit [Spirosoma
linguale DSM 74]
Length = 826
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/842 (64%), Positives = 668/842 (79%), Gaps = 47/842 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR+E+V FDKITAR++KL YGL + PV V+ KV +G+Y GV T++LD LA
Sbjct: 1 MFVVKRDGRRESVKFDKITARIEKLCYGLDPAYVQPVEVAVKVVSGLYDGVKTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA LAARIA+SNLHK T KSFS TIK +Y + + ++G A LI+ ++
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKETNKSFSGTIKKLYQYEDPKTGENASLISKEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++ ++AA LDS IIYDRD+ YDYFG+KTLE+SYLLK+ G++ ERPQHMLMRV++GIH+
Sbjct: 121 YDVVRQHAALLDSTIIYDRDYGYDYFGYKTLEKSYLLKLDGRIAERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAI+TY+++S++WFTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 181 EDIESAIETYNLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATG+YI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGTYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL+LKKN GKEE RARDLFYALW PDLFM+RV+ + WSLFCP+E GLA
Sbjct: 301 LEPWHADIFDFLDLKKNSGKEEGRARDLFYALWTPDLFMKRVEDDDVWSLFCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LYT YEREG+A++ ++AQ LWF+IL SQ ETGTPYML+KD N+KSNQ+NL
Sbjct: 361 DCYGDEFEELYTRYEREGRARRTIKAQELWFKILESQTETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF- 479
GTIKSSNLCTEIIEYT+P E AVCNLASIALP+F+ +RG+
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEIAVCNLASIALPKFI----------------TRGTDGIMR 464
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
FD +KL EVT T NLNKIID+NYYPVE ARRSN+RHRPIG+GVQGLAD FI+L M FE
Sbjct: 465 FDHQKLYEVTKTATRNLNKIIDINYYPVEEARRSNMRHRPIGLGVQGLADAFIMLRMPFE 524
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRW 598
S EA++LN+DIFETIY+ A+ +S E A + GPYET+ SP+S+GI Q DMW V P S+RW
Sbjct: 525 SEEARRLNEDIFETIYFGAMTSSMEQAKEFGPYETWKGSPISQGIFQFDMWGVKPKSNRW 584
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW LR + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK
Sbjct: 585 DWESLRKDVVEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNK 644
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
HLL DL ++G+W+ +KN +I +GS+Q IP IP+ +K +YKTVWEIKQ ++DMA DRG
Sbjct: 645 HLLKDLVKLGLWNDAMKNNLILANGSIQAIPNIPQNIKDLYKTVWEIKQKHIIDMAADRG 704
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV------- 771
YI QSQSLNIH+ NF K+TS+HF W GLKTGMYYLR++AAADA+KFTV
Sbjct: 705 AYICQSQSLNIHIQDSNFGKLTSMHFYAWKAGLKTGMYYLRTKAAADAVKFTVVQPQAEP 764
Query: 772 ------DTSVFKEK----------------PEKPELVVDDETKMAQVVCSLTNREECMAC 809
+V EK P+ +V D E + A + CSL + E C C
Sbjct: 765 QLEPVMAEAVTVEKPLDYVQYAKEHAQNATPQPVPMVTDLEQQYAAMTCSLDDPEGCEMC 824
Query: 810 GS 811
GS
Sbjct: 825 GS 826
>gi|409097320|ref|ZP_11217344.1| ribonucleoside-diphosphate reductase subunit alpha [Pedobacter agri
PB92]
Length = 794
Score = 1144 bits (2958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/818 (66%), Positives = 655/818 (80%), Gaps = 35/818 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E V FDKITAR++KL Y L+++ DP+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVLKRDGRKEPVQFDKITARIQKLCYSLNSDLVDPIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++TT HPDYA LA+RIAVSNLHKNT KSFS T+K +Y +++ ++ APLIADD+
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTTKSFSGTMKMLYEYFDPKAQKPAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEII KNA LDS IIYDRDF +DYFGFKTLE+SYLLKV G +VERPQH+ MRVS+GIHK
Sbjct: 121 YEIIAKNADILDSSIIYDRDFGFDYFGFKTLEKSYLLKVNGAIVERPQHLFMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAIKTY++MS+RWFTHA+PTLFNA TP+PQ+SSCFL+ M+DDSIEGIY+TLK+ A
Sbjct: 181 EDIESAIKTYNLMSERWFTHATPTLFNAATPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIGGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW+ DLFM+RV+ NG W+LFCP+EA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEMRARDLFYALWINDLFMQRVKDNGDWTLFCPHEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE EG+ +K ++AQ LWF IL SQIETGTPYMLFKD N KSNQQNL
Sbjct: 361 DCFGKEFEDLYTKYEAEGRGRKTIKAQELWFAILDSQIETGTPYMLFKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTS E AVCNLAS+ALPRFV N F
Sbjct: 421 GTIKSSNLCTEIIEYTSKDEVAVCNLASLALPRFV--------------------INGQF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL +VT T NLNKIID NYYPV+ A SN+RHRP+G+GVQGLAD FILL + FES
Sbjct: 461 DHQKLYDVTYQATLNLNKIIDHNYYPVQEAENSNMRHRPVGLGVQGLADAFILLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA++LNKDIFETIY+ ++ S+++A K GPY+T+ SP+SKG Q D+WNV P S RWD
Sbjct: 521 DEAKRLNKDIFETIYFASMTASNDLAVKNGPYQTFEGSPLSKGQFQFDLWNVTPDSGRWD 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + K+GV NSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 581 WEALRKKVVKDGVYNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL +G+W+ +KN+II +GS+Q IP IP+ +K +YKTVWEIK ++DMA DRG
Sbjct: 641 LLKDLVALGLWNNDMKNQIILANGSIQAIPSIPDYIKELYKTVWEIKMRNIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQSLN+ ++ PN K+TS+HF W +GLKTGMYYLR++AA+ A+KFTV+ +
Sbjct: 701 YICQSQSLNLFVNAPNTSKLTSMHFYAWEKGLKTGMYYLRTQAASQAVKFTVEN----QG 756
Query: 780 PEKPELVVDDETKMAQV--------VCSLTNREECMAC 809
+ E V+ + QV VCS+ E C++C
Sbjct: 757 GKAIEAVIPAQMTQDQVAEEIVDGPVCSM--EEGCISC 792
>gi|452823074|gb|EME30087.1| ribonucleoside-diphosphate reductase alpha chain [Galdieria
sulphuraria]
Length = 813
Score = 1142 bits (2955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/826 (65%), Positives = 661/826 (80%), Gaps = 30/826 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR++ V FDKITAR+KKL+YGL D + V+QKVC GVY GV+TS+LD+LA
Sbjct: 3 MHVVKRDGRKQPVKFDKITARIKKLAYGLDP-MVDIIEVAQKVCTGVYNGVSTSELDDLA 61
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA M+T H DY+ LA+RIA+SNLHKNT KSFS+T+ +Y++ + ++ APLIA+DI
Sbjct: 62 AETAAYMSTKHHDYSLLASRIAISNLHKNTLKSFSKTMDILYHYESPKTKAPAPLIAEDI 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ IIMKNA LD IIYDRDF YDYFGFKTLERSYLL+V GKV+ERPQHMLMRV++GIHK
Sbjct: 122 HSIIMKNAHVLDDAIIYDRDFSYDYFGFKTLERSYLLRVDGKVIERPQHMLMRVAVGIHK 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+++ ++TY MS+++FTHASPTLFNAGTPRPQLSSCFL+ M +DSIEGIY+TLK CAV
Sbjct: 182 DDLEAVLETYDYMSRKYFTHASPTLFNAGTPRPQLSSCFLLTMTEDSIEGIYDTLKRCAV 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH+IRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 242 ISKSAGGIGLAVHDIRATKSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 301
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE+RARDLFY LWVPDLFM+RV+ + +WSLFCPNEA GLA
Sbjct: 302 LEPWHADIFEFLDLRKNHGKEENRARDLFYGLWVPDLFMKRVEKDEKWSLFCPNEAPGLA 361
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG FE+LY YE+E +A++V+ A+ LWF IL +QIETG PYML+KD CNRKSNQQNL
Sbjct: 362 DCWGEAFEQLYEKYEKEKRARQVIDARKLWFAILEAQIETGNPYMLYKDHCNRKSNQQNL 421
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEI++YTSP E AVCNLASIAL +FV+ S S+ ++
Sbjct: 422 GTIRCSNLCTEIVQYTSPDEVAVCNLASIALNQFVQ--------------FSEDSEEPYY 467
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFE+L VT IVT NLNKIID+NYYPV A+ SNLRHRPIGIGVQGLAD FIL+ + FES
Sbjct: 468 DFEQLEHVTKIVTRNLNKIIDINYYPVTQAKTSNLRHRPIGIGVQGLADAFILMRLPFES 527
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN I ETIYY A+ TS E+A ++G YE++ SP+S+G+ Q D+W V PS R+DW
Sbjct: 528 DEARRLNIQIAETIYYAAMCTSLELAQRDGAYESFRGSPLSRGLFQFDLWQVKPSARYDW 587
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L + I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN+HL
Sbjct: 588 KTLGEAIQRDGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFTIVNQHL 647
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL +G+W+ +KNKII +GSVQ IPEIP++++ +YKT+WE Q L+DMA DRG +
Sbjct: 648 VRDLQRLGLWNNDMKNKIIAYNGSVQHIPEIPQDIRQLYKTIWECSQKRLLDMAADRGAF 707
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLN+++ PN K++S+HF W +GLKTGMYYLR+R AA+AIKFTVD +
Sbjct: 708 IDQSQSLNVYIASPNIGKLSSMHFHGWKKGLKTGMYYLRTRPAAEAIKFTVDQQYLSQAV 767
Query: 781 EKPELVVDDE---------------TKMAQVVCSLTNREECMACGS 811
K L+ ++ T + CSL N E C++CGS
Sbjct: 768 NKSMLLNNNNNNGGEENVSIIRKVPTNEDYLSCSLQNPEGCLSCGS 813
>gi|397531935|gb|AFO54477.1| ribonucleotide reductase large subunit R1ii [Carassius carassius]
Length = 793
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/814 (65%), Positives = 647/814 (79%), Gaps = 24/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDG QE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGHQERVMFDKITSRIQKLCYGLNAEFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A +TT HPDYA LAARIAVSNLHK TKK FSE ++D+YN+ N +G +P+I+ +
Sbjct: 61 AEITATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNGHHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S II+DRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIF+FL LKKN GKEE RARDLFYALW+PDLFM+RV+TN WSL CP++ GL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNADWSLMCPSDCPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFEKLY YE+EG+AK+VV+AQ LW+ I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYMKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL +V + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPERTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA VT ++ +NLNKIIDVNYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDVNYYPVREAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LN IFETIYY AL++S E+AA+ GPYETY SPVSKGILQ DMW P+D WDW
Sbjct: 522 AEAQLLNTQIFETIYYAALESSCELAAECGPYETYAGSPVSKGILQYDMWEKTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 AALKEKITKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN++I +GS+Q IP IP++LK +YKTVWEI Q T++ MA DRG +
Sbjct: 642 LKDLTERGLWNEEMKNQLIAQNGSIQAIPTIPDDLKELYKTVWEISQKTILKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ AA+ I+FT+D KE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLDKEKLKETQ 761
Query: 781 EKPELVVDDETK---MAQVVCSLTNREECMACGS 811
E ++ETK A +VCSL NR+EC+ CGS
Sbjct: 762 ESTS--NEEETKERNKAAMVCSLENRDECLMCGS 793
>gi|375148686|ref|YP_005011127.1| ribonucleoside-diphosphate reductase subunit alpha [Niastella
koreensis GR20-10]
gi|361062732|gb|AEW01724.1| ribonucleoside-diphosphate reductase, alpha subunit [Niastella
koreensis GR20-10]
Length = 789
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/812 (66%), Positives = 655/812 (80%), Gaps = 24/812 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR+G++E V FDKITAR++KLSYGLS D + V++KV G+Y GVTTS+LD LA
Sbjct: 1 MNVLKRNGKKETVKFDKITARIQKLSYGLSP-LVDVIEVTKKVIEGIYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++TT HPDYA LA+RIAVSNLHKNT+KSFS T+K +Y++ + +G K PL+ADD+
Sbjct: 60 AETAASLTTKHPDYALLASRIAVSNLHKNTEKSFSGTMKRLYDYTDSATGRKMPLLADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
EII NA LDS IIYDRDF +DYFGFKTLE+SYLL++ G +VERPQHM MRVSIGIHK
Sbjct: 120 MEIIEANAELLDSSIIYDRDFGFDYFGFKTLEKSYLLRIDGAIVERPQHMYMRVSIGIHK 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAIKTY++MS+RWFTHA+PTLFN GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 EDIESAIKTYNLMSERWFTHATPTLFNGGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIGGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI EFL+L+KNHGKEE RARDLFYALW+ DLFM+RV++NG WSLFCPNEA GL
Sbjct: 300 LEPWHADIVEFLDLRKNHGKEEMRARDLFYALWINDLFMKRVESNGDWSLFCPNEAPGLG 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE EG+ +KV++AQ+LWF IL +QIETGTPYML+KD NRKSNQQNL
Sbjct: 360 DTFGEEFEALYNRYEAEGRQRKVIKAQDLWFAILEAQIETGTPYMLYKDAANRKSNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLAS+ALPRFV E F
Sbjct: 420 GTIKSSNLCTEILEYTSADEVAVCNLASLALPRFVNEGK--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT NLNKIID NYYP+E A+RSNLRHRPIG+GVQGLAD FILL + FES
Sbjct: 460 DFDKLFEVTYQAARNLNKIIDNNYYPIEEAKRSNLRHRPIGLGVQGLADVFILLRLPFES 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A+ LNK+IFETIY+ A+ S ++A ++G YET+ SP+SKG Q D+WNV PS+R+DW
Sbjct: 520 DLAKMLNKNIFETIYFAAMTASKDMAIEQGAYETFAGSPLSKGQFQFDLWNVEPSNRYDW 579
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF++VNKHL
Sbjct: 580 NALRAEVMKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFIIVNKHL 639
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ ++KNKII +GS+Q I EIP E+K +YKTVWEIKQ L+DMA DRG +
Sbjct: 640 LKDLVQLGLWNDSMKNKIIAANGSIQNINEIPAEIKALYKTVWEIKQRHLIDMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-K 779
I QSQSLN+ +D P K+TS+HF +W GLKTGMYYLR++AA+ A++FTV+ ++ +
Sbjct: 700 ICQSQSLNLFVDNPTVAKLTSMHFYSWKVGLKTGMYYLRTQAASQAVQFTVEKQGSRQME 759
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
P P+ ++ + VC++ E C+ C S
Sbjct: 760 PVVPKSGESNDEIIEGQVCTM--EEGCVTCSS 789
>gi|189501949|ref|YP_001957666.1| hypothetical protein Aasi_0536 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497390|gb|ACE05937.1| hypothetical protein Aasi_0536 [Candidatus Amoebophilus asiaticus
5a2]
Length = 790
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/812 (65%), Positives = 653/812 (80%), Gaps = 23/812 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKRDGR E+V FDKITAR++KL GL+T++ +PV ++ KV AG+Y VTT +LD LA
Sbjct: 1 MLVVKRDGRYESVKFDKITARIEKLCTGLNTDYINPVDIAMKVIAGIYDKVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA+M T HPDY LAARIAVSNLHK T +SFS T+K +Y + + ++G A LIA D+
Sbjct: 61 AEIAASMATKHPDYTVLAARIAVSNLHKVTSESFSNTMKWLYTYIDPKTGENASLIASDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I ++AA LD I+Y RD+DYDYFGFKTLERSYLLK+ GK+VERPQHMLMRV++GIHK
Sbjct: 121 YKVIREHAALLDKTIVYKRDYDYDYFGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TYH++S+RWFTHA+PTLFNAGTP+PQLSSCFL+ MK+DSIEGIY+TLK+CA
Sbjct: 181 EDIEAAIQTYHLLSERWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIEGIYDTLKQCAQ 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI+GTNG SNGIVPMLR F+ TARYVDQGGG+RKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIKGTNGISNGIVPMLRNFDMTARYVDQGGGRRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIFEFL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ N +WSLFCPNE+ GLA
Sbjct: 301 LEPWHSDIFEFLDLRKNHGKEELRARDLFYALWIPDLFMQRVENNEEWSLFCPNESPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY YEREGKA+K V+AQ LWF IL +QIETG P+ML+KD+ NRKSNQQNL
Sbjct: 361 DCYGEEFERLYKKYEREGKARKSVKAQELWFAILEAQIETGMPFMLYKDSANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIE+TSP E AVCNLASIALP+F+ + F
Sbjct: 421 GTIKSSNLCTEIIEFTSPEEVAVCNLASIALPKFINQAGK-------------------F 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL E+T ++T+NLNKIID+N+YPV AR SN RHRPIGIGVQGLADTF+ L M F+S
Sbjct: 462 DHQKLYEITYVITKNLNKIIDINHYPVPEARTSNFRHRPIGIGVQGLADTFLRLRMPFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD-RWD 599
PEA+ LNKDIFETIY+ A+ S ++A + GPYET+ SP+SKGI Q DMW V PS RWD
Sbjct: 522 PEARGLNKDIFETIYFAAMTASKDLAKQYGPYETFKGSPISKGIFQFDMWGVEPSSGRWD 581
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKH
Sbjct: 582 WETLRKEVQLHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 641
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL +G+W +KN++I +GSVQ+I IP+ +K +++TVWEI Q ++DMA DRG
Sbjct: 642 LLTDLINLGLWDENMKNELIAANGSVQRIDRIPQHIKELHRTVWEIPQKAIIDMAADRGA 701
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+I QSQS+NIH+ NF K+TS+HF W +GLKTG+YYLR+R AADAIKFT+
Sbjct: 702 FICQSQSMNIHLLDANFAKLTSMHFYAWKKGLKTGLYYLRTRPAADAIKFTLQKEQALND 761
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
P+ V+ + M VC + E+C+ CGS
Sbjct: 762 IPVPQKKVEQQVSM---VCDAEDSEDCLVCGS 790
>gi|308798579|ref|XP_003074069.1| RIR1_BRARE Ribonucleoside-diphosphate reductase large subunit (ISS)
[Ostreococcus tauri]
gi|116000241|emb|CAL49921.1| RIR1_BRARE Ribonucleoside-diphosphate reductase large subunit (ISS)
[Ostreococcus tauri]
Length = 840
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/857 (65%), Positives = 662/857 (77%), Gaps = 66/857 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPV--------------LVSQKVCAG 46
+YVVKRDGR+E V FDKITAR+KKL+YGLS E CDPV +V+QKVC G
Sbjct: 4 LYVVKRDGREEPVAFDKITARIKKLAYGLSQEFCDPVRTDHGRLHLPHSQVIVAQKVCMG 63
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYN 106
V+ GVTT +LDELAAETAA+MT+ HPDYA LAARI+VSNLHK T KSFSET+K MY H N
Sbjct: 64 VFAGVTTKELDELAAETAASMTSKHPDYALLAARISVSNLHKTTVKSFSETMKVMYEHVN 123
Query: 107 ERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVER 166
+R+G +PL+ADD+YEIIM NA LD+E++YDRDFDYDYFGFKTLERSYLL++ GKVVER
Sbjct: 124 KRNGKWSPLLADDVYEIIMANAEKLDAELVYDRDFDYDYFGFKTLERSYLLRIDGKVVER 183
Query: 167 PQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDD 226
PQH+LMRVSIGIHK DI+ AI TYHM+S+RW THASPTLFNAGTPRPQLSSCFL+CMK+D
Sbjct: 184 PQHLLMRVSIGIHKTDIEKAIDTYHMLSERWMTHASPTLFNAGTPRPQLSSCFLICMKED 243
Query: 227 SIEGIYETLKECAVISKSAGGIGVSVH--NIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
SIEGIY+TLKECA ISKSAGGI ++ R T S+ R ++ + +V +AR
Sbjct: 244 SIEGIYDTLKECACISKSAGGIALTFEAPTERRTASF-RCCVCSTTRLATWTKVVV-SAR 301
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQT 344
V +YLEPWHADIF++L+L+KNHGKEE RARDLFY LW DLFM+RV+
Sbjct: 302 NV-----------RIYLEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEA 350
Query: 345 NGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPY 404
NG+W+L CPNE GL+DCWG EFE LY YE EGK KK ++AQ LWF IL SQ+ETG PY
Sbjct: 351 NGEWTLMCPNECPGLSDCWGEEFETLYEKYEAEGKGKKTIKAQQLWFAILESQVETGNPY 410
Query: 405 MLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVES 464
MLFKD CNRKSNQQNLGTIKSSNLCTEI+EYTSP ETAVCNLASIALPRFV +E+
Sbjct: 411 MLFKDACNRKSNQQNLGTIKSSNLCTEIVEYTSPDETAVCNLASIALPRFV------IEN 464
Query: 465 HPS---------RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL 515
+PS ++VGS SK RFFD KL E+T VT NLN+IIDVNYYPVE A+ SN+
Sbjct: 465 NPSSPTGRTETKKLVGSLKSKERFFDHSKLFEITRKVTRNLNRIIDVNYYPVEAAKNSNM 524
Query: 516 RHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETY 575
RHRPIG+GVQGLAD FILLG+ F+SPEAQ+LN +IFETIY+ AL S+ +A EGPY TY
Sbjct: 525 RHRPIGLGVQGLADVFILLGLPFDSPEAQKLNAEIFETIYFAALTESNALAVAEGPYSTY 584
Query: 576 HNSPVSKGILQPDMWNV--IP-SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
SPVSKG+LQPDMW + +P +R DW LR I+++GVRNSLLVAPMPTASTSQILGN
Sbjct: 585 EGSPVSKGVLQPDMWGLTEMPGGNRHDWAGLRASIAQHGVRNSLLVAPMPTASTSQILGN 644
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIP 692
NECFEPYTSNIY+RRVLSGEF VVN+HLL DLTE+G+W P +KN++I ++GSVQ + +IP
Sbjct: 645 NECFEPYTSNIYARRVLSGEFTVVNQHLLSDLTELGLWDPELKNELISNNGSVQDL-DIP 703
Query: 693 EELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLK 752
+ LK IYKTVWEIKQ LVDMA DRG +IDQSQS N+HM PN K+TSLHF W +GLK
Sbjct: 704 DNLKNIYKTVWEIKQRVLVDMAADRGAFIDQSQSFNVHMSDPNSGKLTSLHFYAWKKGLK 763
Query: 753 TGMYYLRSRAAADAIKFTVDTSVFKEK----------PEKP-----ELVVDDETK---MA 794
TGMYYLRSRAAADAIKFTVD + K K P KP E + D+E + A
Sbjct: 764 TGMYYLRSRAAADAIKFTVDATKTKSKVNKENEAPASPRKPTKADLEKMTDEEKEAYLAA 823
Query: 795 QVVCSLTNREECMACGS 811
++ CSL NR++C+ CGS
Sbjct: 824 KLQCSLQNRDDCVMCGS 840
>gi|343084826|ref|YP_004774121.1| ribonucleoside-diphosphate reductase subunit alpha [Cyclobacterium
marinum DSM 745]
gi|342353360|gb|AEL25890.1| ribonucleoside-diphosphate reductase, alpha subunit [Cyclobacterium
marinum DSM 745]
Length = 798
Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/815 (65%), Positives = 658/815 (80%), Gaps = 21/815 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKIT R++ L Y L + P+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCYELDARYIHPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A++T HPDYA LAARIA+SNLHK T +SFS T+K +Y + N ++ A LIA D+
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYINPKTDENAALIAPDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ K+AA LD I Y RDFDYD+FGFKTLERSYL+K+ GKVVERPQHMLMRVSIGIHK
Sbjct: 121 YGIVKKHAAKLDQVIDYSRDFDYDFFGFKTLERSYLIKLDGKVVERPQHMLMRVSIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TYH++SQ+WFTHA+PTLFNAGTP+PQLSSCFL+ MKDDSI+GIY+TLK+CA
Sbjct: 181 EDIDAAIETYHLLSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL+LKKNHGK+E RARDLFYA+WV DLFM+RV+ N +WSLFCP+EA GLA
Sbjct: 301 LEPWHADIKDFLDLKKNHGKDELRARDLFYAVWVSDLFMKRVEANEEWSLFCPHEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC G EFE+LY YE+EG+A++ ++AQ LWFEIL SQIETGTPY+L+KD N KSNQ+NL
Sbjct: 361 DCHGEEFERLYEKYEKEGRARETIKAQELWFEILESQIETGTPYILYKDAANGKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTSP E AVCNLAS+ALP+FV G G K+ F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASLALPKFVS-------------TGKDGKKH--F 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL EVT +VT+NLNK+IDVNYYPV AR+SN RHRP+G+G+QGLADTFILL M F+S
Sbjct: 466 DHQKLYEVTKVVTKNLNKVIDVNYYPVPEARKSNFRHRPVGLGIQGLADTFILLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA+ LN+DIFETIY+ +++TS E+A G YETY SPVSKG+ Q DMW V P S RW+
Sbjct: 526 EEAKGLNEDIFETIYFASMETSMELAKINGTYETYEGSPVSKGLFQFDMWGVTPKSGRWN 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ ++K GVRNSLLVAPMPTASTSQILGNNECFEPYT+NIY+RR LSGEFVVVNKH
Sbjct: 586 WTGLKEKVNKYGVRNSLLVAPMPTASTSQILGNNECFEPYTTNIYTRRTLSGEFVVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL +G+W+ +KN++I +GSVQ +P+IP+ LK +YKTVWEI Q ++DMA DRG
Sbjct: 646 LMKDLIRLGLWTDGMKNRLIASNGSVQDMPDIPQNLKDLYKTVWEISQKVIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
Y+ QSQS+N+ + +PNF K+TS+HF W +GLKTG+YYLRS+AA+ AIKFTVD S +
Sbjct: 706 YVCQSQSMNLFLQEPNFGKLTSMHFYAWKKGLKTGIYYLRSKAASSAIKFTVDKSQLND- 764
Query: 780 PEKPELVVDDETKMAQ---VVCSLTNREECMACGS 811
+K + D E + Q +VCSL N +EC ACGS
Sbjct: 765 -DKQTAIDDAEARKQQQDAIVCSLDNPDECEACGS 798
>gi|404450557|ref|ZP_11015538.1| ribonucleoside-diphosphate reductase subunit alpha [Indibacter
alkaliphilus LW1]
gi|403763777|gb|EJZ24720.1| ribonucleoside-diphosphate reductase subunit alpha [Indibacter
alkaliphilus LW1]
Length = 800
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/816 (65%), Positives = 648/816 (79%), Gaps = 21/816 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKIT+R++ L Y L + P+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITSRIENLCYNLDGRYIQPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A++T HPDYA LAARIA+SNLHK T +SFS T+K +Y + N ++G A LIA D+
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYINPKTGENAALIAPDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ K+AA D I Y RDFDYDYFGFKTLE+SYL+K+ GKVVERPQHMLMRV++GIHK
Sbjct: 121 YGIVKKHAARFDEAIDYTRDFDYDYFGFKTLEKSYLIKLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TY+++S++WFTHA+PTLFNAGTP+PQLSSCFL+ MKDDSI+GIY+TLK+CA
Sbjct: 181 EDIEAAIETYNLLSEKWFTHATPTLFNAGTPKPQLSSCFLLAMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL LK+NHGKEE RARDLFYA+W+PDLFM+RV+ N WSLFCPNEA GL
Sbjct: 301 LEPWHADIKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNEDWSLFCPNEAPGLG 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC EFEKLY YEREG+A++ ++AQ LWFEIL SQIETGTPYML+KD+ N+KSNQQNL
Sbjct: 361 DCHSEEFEKLYEKYEREGRARETIKAQELWFEILESQIETGTPYMLYKDSANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT+P E AVCNLASIALP+FV+ G G K FF
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVK-------------TGPDGKK--FF 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL E+T + T NLNK+IDVNYYPVE ARRSN RHRPIG+GVQGLADTFI L M FES
Sbjct: 466 DHKKLYEITKVATRNLNKVIDVNYYPVEEARRSNFRHRPIGLGVQGLADTFISLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA+ LN+DIFETIY+ +++TS E+A +G YETY SP SKG LQ DMW V P S RW+
Sbjct: 526 EEAKGLNEDIFETIYFASVETSMELAKVQGTYETYEGSPASKGQLQFDMWGVTPKSGRWE 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + K G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WDGLKAQVKKYGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL +G+W+ +KN++I +GSVQ IP IP+ +K IYKTVWEI Q ++DMA DRG
Sbjct: 646 LMKDLIRLGLWNDNMKNRLIAANGSVQAIPNIPQNIKDIYKTVWEISQRVVIDMAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQS+N+ M PNF K+TS+HF W +GLKTGMYYLRS+AA AI+FTVD S E
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAATSAIQFTVDKSAL-EA 764
Query: 780 PEKPELVVDDETKMAQ----VVCSLTNREECMACGS 811
+ + E+ +Q + CSL + E C CGS
Sbjct: 765 DKITDAAAAHESNKSQKQDAIACSLDDPEGCEMCGS 800
>gi|373954258|ref|ZP_09614218.1| ribonucleoside-diphosphate reductase, alpha subunit
[Mucilaginibacter paludis DSM 18603]
gi|373890858|gb|EHQ26755.1| ribonucleoside-diphosphate reductase, alpha subunit
[Mucilaginibacter paludis DSM 18603]
Length = 792
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/815 (66%), Positives = 658/815 (80%), Gaps = 27/815 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDG++E V FDKITAR++KL YGL+ DP+ VS+KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGKKETVKFDKITARIEKLCYGLNPSLVDPIDVSKKVVEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++TT HPDYA LA+RIAVSNLHKNT KSFSET++++Y + ++++G A LIADD+
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTIKSFSETMRNLYLYTDKKTGKNASLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++ I NA LDS IIYDRDF +DYFGFKTLE+SYLLK+ GK+ ERPQH+ MRVS+GIHK
Sbjct: 121 WQAIEANAELLDSTIIYDRDFGFDYFGFKTLEKSYLLKIDGKIAERPQHLFMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DIDS IKTY++MS+RWFTHA+PTLFNAGTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 181 EDIDSVIKTYNLMSERWFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGI+PML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIIPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE RARDLFYALW+ DLFM+RV+ +GQWSLFCP+EA GL
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEMRARDLFYALWICDLFMQRVEEDGQWSLFCPHEAPGLH 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFE LYT YE EG+A+K ++AQ LWF IL +Q+ETGTPY+L+KD N KSNQQNL
Sbjct: 361 ECWGKEFEALYTKYEAEGRARKTIRAQELWFAILDAQVETGTPYLLYKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTS E AVCNLAS+ALPR++ F
Sbjct: 421 GTIKSSNLCTEIIEYTSADEVAVCNLASLALPRYITAG--------------------VF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL EVT VT NLNKIID NYYPV A SN RHRPIG+GVQGLADTFI L + FES
Sbjct: 461 DHQKLYEVTYQVTLNLNKIIDHNYYPVVEASNSNFRHRPIGLGVQGLADTFIRLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA++LNK+IFETIY+ A+ S ++A ++GPYET+ SP+S+G Q D+WNV P S RW+
Sbjct: 521 DEAKKLNKEIFETIYFAAMTASKDLAIQDGPYETFKGSPLSQGKFQFDLWNVTPDSGRWN 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK+
Sbjct: 581 WEDLRSDVMNHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKY 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LLHDL E+G+W+ +KN+II +GSVQ IPEIP E+K +YKTVWEIK T++DMA DRG
Sbjct: 641 LLHDLVELGLWNNDMKNQIISANGSVQDIPEIPAEIKELYKTVWEIKMRTIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE- 778
Y+ QSQSLN+ + PN K+TS+HF W +GLKTGMYYLR++AA+ A+KFT+++ K
Sbjct: 701 YVCQSQSLNLFISSPNASKLTSMHFYAWKKGLKTGMYYLRTQAASQAVKFTIESQGGKSM 760
Query: 779 KPEKPE--LVVDDETKMAQVVCSLTNREECMACGS 811
+P PE + V DE VCS+ E C+ C +
Sbjct: 761 EPVIPENGVAVVDEIPDGP-VCSM--EEGCVTCSA 792
>gi|124003381|ref|ZP_01688231.1| ribonucleoside-diphosphate reductase, alpha subunit [Microscilla
marina ATCC 23134]
gi|123991479|gb|EAY30910.1| ribonucleoside-diphosphate reductase, alpha subunit [Microscilla
marina ATCC 23134]
Length = 808
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/783 (68%), Positives = 641/783 (81%), Gaps = 21/783 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKITAR++KLSY L+ ++ PV V++KV G+Y GVTT +LD LA
Sbjct: 1 MQVIKRDGRRESVRFDKITARIEKLSYSLARDYVQPVEVAKKVITGIYDGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA M HPDYA LAARIA+SNLHK T K FS+T+K++Y + + ++G KA LI+D+
Sbjct: 61 AETAATMAIKHPDYAILAARIAISNLHKTTSKVFSKTMKELYEYIDPKTGEKAGLISDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ I KNAA LDS IIYDRD++YDYFGFKTLERSYLLK+ G+VVERPQHMLMRV++GIH
Sbjct: 121 HAAIQKNAAVLDSSIIYDRDYNYDYFGFKTLERSYLLKMDGQVVERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D ++TY ++S +WFTHA+PTLFNAGTP+PQLSSCFL+ M+DDSIEGIY+TLK+CA
Sbjct: 181 EDVDKVLETYELLSGKWFTHATPTLFNAGTPKPQLSSCFLLTMQDDSIEGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI+GTNGTSNG++PML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTNGTSNGVIPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LKKNHGKEE RARDLFYA+W+ DLFM+RV+ + WSLFCPNEA GL
Sbjct: 301 LEPWHADIFEFLDLKKNHGKEELRARDLFYAMWLSDLFMKRVENDDTWSLFCPNEAPGLH 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFEKLY YE EG+A+KV++AQ+LWF+IL SQIETGTPYML+KD N KSNQ+NL
Sbjct: 361 EVYGEEFEKLYEQYELEGRARKVIKAQDLWFKILESQIETGTPYMLYKDAANEKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLASIALP+FV I G F
Sbjct: 421 GTIKSSNLCTEIMEYTSKDEVAVCNLASIALPKFV-------------IDGK-------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL EVT +VT NLN+IID+NYYPV+ A SNLRHRPIGIGVQGLADTF++L M F+S
Sbjct: 461 DHQKLYEVTQVVTRNLNRIIDINYYPVKEAENSNLRHRPIGIGVQGLADTFMMLRMPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA+ LNKDIFETIY+ ++ S E+A KEG YE+Y SPVS+GI Q DMW V P S RWD
Sbjct: 521 EEAKGLNKDIFETIYFASMTASMELAQKEGAYESYKGSPVSEGIFQFDMWGVKPESGRWD 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + K+G RNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 581 WQALRKDVKKHGARNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL E+ +W ++N+I +GSVQ IPEIP+ LK IYKTVWEIKQ +VDMA DRG
Sbjct: 641 LLNDLVELNLWGGDMENRIKAANGSVQNIPEIPQNLKDIYKTVWEIKQKDVVDMAADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+I QSQSLNIHM+ P F K+TS+HF W +GLKTG YYLR++AAA AI+FTV+ +E
Sbjct: 701 FICQSQSLNIHMENPTFGKLTSMHFYAWKKGLKTGTYYLRTKAAAKAIQFTVEKKYQEES 760
Query: 780 PEK 782
K
Sbjct: 761 KGK 763
>gi|397531933|gb|AFO54476.1| ribonucleotide reductase large subunit R1i [Carassius carassius]
Length = 793
Score = 1137 bits (2940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/812 (65%), Positives = 647/812 (79%), Gaps = 20/812 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNAEFVDPTHITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A +TT HPDYA LAARIAVSNLHK TKK FSE ++D+YN+ N + +P+++ +
Sbjct: 61 AEISATLTTKHPDYAILAARIAVSNLHKETKKVFSEAMEDLYNYVNPLNDRHSPMVSKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S II+DRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSI+GIY+TLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIF+FL LKKN GKEE RARDLFYALW+PDLFM+RV+TNG W L CPN+ GL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWCLMCPNDCPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFE LYT YE+EGKAK+VV+AQ LW I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 ECWGEEFENLYTKYEKEGKAKRVVKAQQLWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASVALNMYV-------------------TPERTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA VT ++ +NLNKIID+NYYPV+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDINYYPVQEAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LN IFETIYY AL++S E+AA+ GPYETY SPVSKGILQ DMW+ P+D WDW
Sbjct: 522 AEAQLLNTQIFETIYYAALESSCELAAEFGPYETYAGSPVSKGILQYDMWDKTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 EALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN++I +GS+Q IP IP++LK +YKTVWEI Q T++ MA DRG +
Sbjct: 642 LKDLTERGLWNEEMKNQLIAQNGSIQGIPTIPDDLKELYKTVWEISQKTILKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ AA+ I+FT++ KE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKETQ 761
Query: 781 EKPELVVD-DETKMAQVVCSLTNREECMACGS 811
+ + E MA +VCSL NR+EC+ CGS
Sbjct: 762 KSASNEEEIKELNMAAMVCSLENRDECLMCGS 793
>gi|320167592|gb|EFW44491.1| ribonucleotide reductase M1 subunit [Capsaspora owczarzaki ATCC
30864]
Length = 785
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/810 (65%), Positives = 648/810 (80%), Gaps = 28/810 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR E V FDKIT+R+ KL YGL++++ D V ++QKV GVY GVTT +LD LA
Sbjct: 1 MFVKKRDGRTEKVMFDKITSRVNKLCYGLNSDYVDAVEITQKVINGVYPGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS ++D+Y + N ++G APL+ADD+
Sbjct: 61 AETAAYLTTKHPDYAILAARIAVSNLHKETKKQFSSVMRDLYEYQNPKTGKPAPLLADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEII +NA LDS +IYDRDF Y YFGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIHK
Sbjct: 121 YEIIQRNADILDSAVIYDRDFSYSYFGFKTLERSYLLKLHGKIAERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++ID ++TY++MS++WFTHASPTLFN+GTP PQLSSCFL+ MKDDSIEGIYETLK CA+
Sbjct: 181 ENIDLVLETYNLMSEKWFTHASPTLFNSGTPHPQLSSCFLLTMKDDSIEGIYETLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRA+GSYI GTNG SNG+VPMLRVFN TARYVDQGG +R GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHCIRASGSYIAGTNGHSNGLVPMLRVFNTTARYVDQGGNRRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+FL LKKN GKEE RARDLF+ALW+PDLFM+RV+ +G WSL CP+E GL
Sbjct: 301 LEPWHADVFDFLELKKNTGKEEQRARDLFFALWIPDLFMKRVEADGNWSLMCPHECPGLE 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G +FE+LYT YEREGKA+KV++AQ LWF IL SQ E+GTPYML+KD CN KSNQ+NL
Sbjct: 361 ETYGDKFEELYTRYEREGKARKVIKAQKLWFAILESQTESGTPYMLYKDACNIKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNLAS++LP FVR +R +
Sbjct: 421 GTIKCSNLCTEIVEYSSPDEVAVCNLASLSLPMFVR-------------------SDRTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+T +VT+NLN+IID+NYYPV A +SN+RHRPIG+GVQGLAD FI + + F+S
Sbjct: 462 DFKKLHEITQVVTKNLNRIIDINYYPVPEAEKSNMRHRPIGLGVQGLADAFIQMRVPFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVI-PSDRWD 599
+A++LN++IFETIY+ AL S E+A K GPYETY SPVS+GILQ DMW V S WD
Sbjct: 522 EDAKKLNREIFETIYHAALTASVEMAKKSGPYETYAGSPVSQGILQHDMWGVKETSGLWD 581
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I+++G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN+H
Sbjct: 582 WDALRAQIAQHGIRNSLLVAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNQH 641
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LLHDL E+G+W+ +KNKII GS+ I EIP ++ +YKTVWE+ Q TL+DMA DRG
Sbjct: 642 LLHDLMELGLWNDRMKNKIISQGGSIAGIEEIPAHIRALYKTVWELSQKTLIDMAADRGA 701
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YIDQSQS N+H+ +PNF K+TS+HF W RGLKTGMYYLR+R AA+AI+FTVD
Sbjct: 702 YIDQSQSFNVHIAEPNFGKLTSMHFYAWKRGLKTGMYYLRTRPAANAIQFTVDQKALA-A 760
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMAC 809
P+K VD+E M VCSL N+E C+ C
Sbjct: 761 PQK----VDEEAAM---VCSLQNKEACLMC 783
>gi|390945294|ref|YP_006409055.1| ribonucleoside-diphosphate reductase subunit alpha [Belliella
baltica DSM 15883]
gi|390418722|gb|AFL86300.1| ribonucleoside-diphosphate reductase, alpha subunit [Belliella
baltica DSM 15883]
Length = 799
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/815 (65%), Positives = 652/815 (80%), Gaps = 20/815 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKIT+R++KL YGL + P+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITSRIEKLCYGLDDRYIQPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A++T HP+YA+LAARIAVSNLHK T +SFS T+K +Y + N ++ A LIA D+
Sbjct: 61 AEICASLTVRHPEYATLAARIAVSNLHKTTSQSFSNTMKRLYTYINPKTEENAALIASDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ K+AA LD I Y+RDF YDYFGFKTLERSYL+++ GKVVERPQHMLMRV++GIHK
Sbjct: 121 YGIVKKHAAKLDEAIDYNRDFAYDYFGFKTLERSYLIRLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHA+PTLFNAGTP+PQLSSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 181 EDIDAAIETYNLLSEKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RA GSYI+GTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRAKGSYIKGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ +FL LK+NHGKEE RARDLFYA+W+PDLFM RV+ N WSLFCPNEA GLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMRRVEQNESWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC EF+KLY YEREG+A++ ++AQ LWFEIL SQIETGTPYML+KD N+KSNQQNL
Sbjct: 361 DCHSEEFDKLYEKYEREGRARETIKAQELWFEILESQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSP E AVCNLASIALP+FV E G G K F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFVVE-------------GKDGVKK--F 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL E+T + T NLNK+IDVNYYPVE A+RSN RHRPIG+GVQGLAD FILL M F+S
Sbjct: 466 DHQKLYEITKVATRNLNKVIDVNYYPVEEAKRSNFRHRPIGLGVQGLADAFILLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA++LN+DI ET+Y+ A++TS EIA EG YETY SPVSKG Q D W V P S+RW+
Sbjct: 526 DEARRLNEDIAETMYFAAMETSMEIAKVEGTYETYAGSPVSKGQFQFDHWAVQPKSNRWN 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WNDLKEKVKKYGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL +G+W+ +KN++I +GSVQ IP IP+ +K +YKTVWEI Q T++DMA DRG
Sbjct: 646 LMRDLINLGLWNDNMKNRLIAANGSVQNIPGIPQNIKDLYKTVWEISQKTIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQS+N+ + PNF K+TS+HF W +GLKTGMYYLRS+AA AI+FTVD S +
Sbjct: 706 YICQSQSMNVFLQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAATSAIQFTVDKSALVDT 765
Query: 780 PEKPELVVD---DETKMAQVVCSLTNREECMACGS 811
P ++ +D + K + CSL N ++C CGS
Sbjct: 766 PTN-QVSIDTSVSQQKQDAIACSLDNPDDCEMCGS 799
>gi|196012349|ref|XP_002116037.1| hypothetical protein TRIADDRAFT_50804 [Trichoplax adhaerens]
gi|190581360|gb|EDV21437.1| hypothetical protein TRIADDRAFT_50804 [Trichoplax adhaerens]
Length = 780
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/809 (66%), Positives = 647/809 (79%), Gaps = 31/809 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR+E V FDKIT+R+ KL Y L+ +H DP ++ KV AG+Y GVTT +LD LA
Sbjct: 1 MYVVKRDGRKEKVMFDKITSRVSKLCYNLNNDHVDPAAITMKVIAGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA+MTTNHPDYA LAARIAVSNLHK TKK+FS + ++YN+ N ++G +P+I+ +
Sbjct: 61 AEIAASMTTNHPDYALLAARIAVSNLHKETKKTFSVVMDELYNYVNPKNGKHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+EII K+ L+S IIYDRD++Y++FGFKTLERSYLLK+ KV ERPQHMLMRVS+GIH
Sbjct: 121 HEIITKHCERLNSAIIYDRDYNYNFFGFKTLERSYLLKIDKKVAERPQHMLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID AI+TY++MS+RWFTHASPTLFNAGT RPQLSSCFL+ M DDSIEGIY+TLK+CA+
Sbjct: 181 EDIDGAIETYNLMSERWFTHASPTLFNAGTCRPQLSSCFLLTMSDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVH IR++GSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLSVHCIRSSGSYIAGTNGHSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIF+FL+LKKN GKEE RARDLFYA+W+PDLFM+RV+ NG WSL CPN+ GL
Sbjct: 301 LEPWHPDIFDFLDLKKNTGKEEQRARDLFYAMWMPDLFMKRVEENGVWSLMCPNDCPGLH 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEKLYT YE GK + V+AQ LWF IL +Q+ETGTPYML+KD CNRKSNQ+NL
Sbjct: 361 DTYGEEFEKLYTEYEDAGKFIRQVRAQKLWFAILEAQVETGTPYMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTSP E AVCNLASIALPRFVR ++ F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPRFVR-------------------PDKTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLAEVT ++T NLNKIID+N+YPV A +SN RHRPIGIGVQGLAD FIL+ F+
Sbjct: 462 DFHKLAEVTKVITRNLNKIIDINFYPVPEAEKSNKRHRPIGIGVQGLADAFILMRFPFDG 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN IFE+IYY AL+ S E+A + GPYETY SP S+G LQ D+W P+D W+W
Sbjct: 522 PEARDLNIKIFESIYYGALQASCELAKEVGPYETYEGSPASQGQLQFDLWEKQPTDLWNW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSGEF VVN+HL
Sbjct: 582 NSLKEDIKKYGLRNSLLLAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQVVNQHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT+MG+W+ +KN++I ++GS+QKI IP+++K +YKTVWEI Q TL+DMA DRG Y
Sbjct: 642 LKDLTDMGVWNDMMKNELIANNGSIQKINNIPDDIKALYKTVWEISQRTLIDMAADRGAY 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS N+H+ +PNF K+TS+HF W +GLKTGMYYLR++ AA AI+FTVD KEK
Sbjct: 702 IDQSQSFNVHIAEPNFAKLTSMHFYAWKKGLKTGMYYLRTKPAASAIQFTVD----KEKL 757
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMAC 809
+K D E+ M VCSL N+E C+ C
Sbjct: 758 QK-----DRESAM---VCSLENKEACLMC 778
>gi|311748426|ref|ZP_07722211.1| ribonucleoside-diphosphate reductase, alpha subunit [Algoriphagus
sp. PR1]
gi|126576939|gb|EAZ81187.1| ribonucleoside-diphosphate reductase, alpha subunit [Algoriphagus
sp. PR1]
Length = 799
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/814 (64%), Positives = 652/814 (80%), Gaps = 18/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKITAR++ L Y L + P+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITARIENLCYELDPKFIQPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A++T HPDYA LAARIA+SNLHK T +SFS T+K +Y + N ++G A LI ++
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYINPKTGGNASLIDPEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ KNAA LD+ I Y RDF YDYFG+KTLERSYL+++ GKVVERPQHMLMRV++GIHK
Sbjct: 121 YGVVKKNAAKLDAIIDYKRDFGYDYFGYKTLERSYLIRLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+A++TYH++S++WFTHA+PTLFNAGTP+PQLSSCFL+ MKDDSI+GIY+TLK+CA
Sbjct: 181 EDIDAAVETYHLLSEKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RA GSYI+GTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHHVRAKGSYIKGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ +FL+LK+NHGKEE RARDLFYALW+ DLFM+RV+ N WSLFCPNEA GL+
Sbjct: 301 LEPWHADVKDFLDLKRNHGKEEMRARDLFYALWISDLFMKRVEQNETWSLFCPNEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY YE+EG+A++ V+AQ LWFEIL SQIETGTPYML+KD N+KSNQQNL
Sbjct: 361 DCYGEEFERLYEKYEKEGRARETVKAQELWFEILESQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT+P E AVCNLAS+ALP+FVR G G FF
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASLALPKFVR-------------TGPDG--KLFF 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL E+T + T NLNK+IDVNYYPV+ ARRSN RHRPIG+GVQGLAD FI+L M FES
Sbjct: 466 DHQKLYEITKVATRNLNKVIDVNYYPVDEARRSNFRHRPIGLGVQGLADAFIMLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA+ LN+DIFETIYY A++TS E+A EG YETY SP SKGILQ DMW V P S+RW+
Sbjct: 526 AEAKGLNEDIFETIYYAAVETSMELAKVEGTYETYEGSPASKGILQFDMWGVTPKSERWN 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K G+RNSLLVAPMPTASTSQILGNNECFEPYT+NIY+RR LSGEF+VVNKH
Sbjct: 586 WTELKEKVKKVGLRNSLLVAPMPTASTSQILGNNECFEPYTTNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL +G+W ++N++I +GSVQ +P +P+ +K +YKTVWEI Q ++D+A DRG
Sbjct: 646 LMKDLIRLGLWDDNMRNRLISTNGSVQSLPGVPQNIKDLYKTVWEISQKVIIDLAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQS+N+ + PNF K+TS+HF W +GLKTGMYYLRS+AAA AIKFT+D S + K
Sbjct: 706 YICQSQSMNVFLQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAASAIKFTLDKSNLEPK 765
Query: 780 PEKP--ELVVDDETKMAQVVCSLTNREECMACGS 811
+K E + K + CSL + + C CGS
Sbjct: 766 VDKAMQEEIDAKSLKQDAISCSLDDPDGCEMCGS 799
>gi|71895081|ref|NP_001026008.1| ribonucleoside-diphosphate reductase large subunit [Gallus gallus]
gi|53127690|emb|CAG31174.1| hypothetical protein RCJMB04_2p9 [Gallus gallus]
Length = 790
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 651/811 (80%), Gaps = 21/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNADFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ + D+YN+ N +G +P+I+ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMDDLYNYINPHNGKHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ KV ERPQHMLMRV++GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINSKVAERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RP+LSSCFL+CMKDDSIEGIY+TLK+CA+
Sbjct: 181 NDIDAAIETYNLLSERWFTHASPTLFNAGTNRPRLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ ++VV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ+LN+ IFETIYY AL+ S E+A ++GPYETY SPVSKGILQ DMWNV PSD WDW
Sbjct: 522 PEAQRLNQQIFETIYYGALEASCELAEQQGPYETYEGSPVSKGILQYDMWNVTPSDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL++PMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 582 KALKEKIAKYGVRNSLLLSPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q I EIP +LK +YKTVWEI Q T++ MA DRG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIAHNGSIQNISEIPADLKQLYKTVWEISQKTVLKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ AA+ I+FT++ +E+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLRERE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ E + E A +VCSL NR+ECM CGS
Sbjct: 762 KASE--EEKERNKAAMVCSLENRDECMMCGS 790
>gi|338210538|ref|YP_004654587.1| ribonucleoside-diphosphate reductase subunit alpha [Runella
slithyformis DSM 19594]
gi|336304353|gb|AEI47455.1| ribonucleoside-diphosphate reductase, alpha subunit [Runella
slithyformis DSM 19594]
Length = 815
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/773 (68%), Positives = 644/773 (83%), Gaps = 16/773 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E+V FDKIT+R++KL YGL + P+ V++KV AG+Y GVTT++LD LA
Sbjct: 1 MYVIKRDGRRESVKFDKITSRIEKLCYGLDALYVQPIEVAKKVVAGIYDGVTTAELDVLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA LAARIA+SNLHKNT KSFS T+K +Y + + ++G A LI+ +
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKNTLKSFSATMKQLYTYTDPKTGENASLISKEA 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++II K+AA LDS IIYDRD+ YDYFG+KTLE+SYLLKV GK+ ERPQHMLMRV++GIH
Sbjct: 121 HDIIRKHAALLDSTIIYDRDYGYDYFGYKTLEKSYLLKVNGKIAERPQHMLMRVAVGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDS I+TY+++S+RWFTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GIY+TLK+CA+
Sbjct: 181 DDIDSVIETYNLLSERWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LK+NHGKEE RARDLFYA+W+PDLFM+RV+ N WSL CP+E GLA
Sbjct: 301 LEPWHADIFEFLDLKRNHGKEELRARDLFYAMWIPDLFMKRVEANDTWSLLCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YEREGK +K ++AQ+LWF I+ SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 361 DSYGDEFEQLYEKYEREGKVRKTIKAQDLWFAIMESQIETGTPYMLYKDHANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTSP E AVCNLASI+LP+FV + G+ G + F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASISLPKFVEQ-------------GTDGFLH--F 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ KL E+T +VT+NLNKIID+NYYPV A RSN RHRPIGIG+QGLAD F+++ M FES
Sbjct: 466 NHGKLFEITKVVTKNLNKIIDLNYYPVPEAERSNKRHRPIGIGIQGLADAFLMMRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA++LN+DI ETIY A+ S E+A +GPYET+ SP+S+GI Q DMWNV P S RW+
Sbjct: 526 EEARRLNEDIHETIYCGAMTASMELAKTQGPYETWKGSPISQGIFQFDMWNVTPKSGRWN 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + K GVRNSLL+APMPTASTSQILGNNECFEP+TSN+Y RRVLSGEF+VVNK+
Sbjct: 586 WEQLRKDVVKFGVRNSLLLAPMPTASTSQILGNNECFEPFTSNLYVRRVLSGEFIVVNKY 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL + G+W+ ++KNK++ +GSVQKI E+P LK +YKT WEIKQ T+VDMA DRG
Sbjct: 646 LLKDLVKEGLWNDSMKNKLMAHNGSVQKIDEVPSHLKELYKTAWEIKQKTIVDMAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
YI QSQSLNI MD N+ K+TS+HF W +GLKTGMYYLR++AA DA+K TV+
Sbjct: 706 YICQSQSLNIFMDNANYGKLTSMHFYAWKKGLKTGMYYLRTQAAVDAVKITVE 758
>gi|327403796|ref|YP_004344634.1| ribonucleoside-diphosphate reductase subunit alpha [Fluviicola
taffensis DSM 16823]
gi|327319304|gb|AEA43796.1| ribonucleoside-diphosphate reductase, alpha subunit [Fluviicola
taffensis DSM 16823]
Length = 789
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/811 (65%), Positives = 647/811 (79%), Gaps = 26/811 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+EAV FDKITAR+ K+ YGL P V+ KV G+Y GVTT+ LD LA
Sbjct: 1 MYVLKRDGRKEAVKFDKITARIIKMCYGLDP-LVSPEAVAMKVIEGIYDGVTTTVLDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AAA T +HPDYA LA+RIAVSNLHK TKKSFSE ++D+Y + + ++G +A LIADD+
Sbjct: 60 AEVAAAKTIDHPDYALLASRIAVSNLHKETKKSFSEVMEDLYKYVDPKTGQRASLIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+I N+ LDS IIYDRDF YDYFGFKTL RSYLL+ +G++ ERPQ MLMRV++GIHK
Sbjct: 120 YEVIQNNSELLDSSIIYDRDFRYDYFGFKTLTRSYLLRTKGEIAERPQQMLMRVAVGIHK 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+ AIKTY++MS+ WFTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIYETLK CA
Sbjct: 180 NDLPQAIKTYNLMSEGWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYETLKSCAQ 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+++HNIRATGSYI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLAIHNIRATGSYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHAD+F+FL+LKKN GKEE RARDLF+ALW+PDLFM+RV+ NG W+L CP+E GL+
Sbjct: 300 IEPWHADVFDFLDLKKNTGKEEMRARDLFFALWIPDLFMKRVEENGDWTLMCPHECPGLS 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +GAEFE LYT YE EGK +K ++AQ+LWF++L SQIETGTPYML+KD N KSNQQNL
Sbjct: 360 DTFGAEFEALYTQYETEGKGRKTIKAQDLWFKVLESQIETGTPYMLYKDAANAKSNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLCTEIIEYT+P E AVCNLAS+ALP++V E + F
Sbjct: 420 GVIKSSNLCTEIIEYTAPDEIAVCNLASLALPKYVTE-------------------DGKF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL EVT T NLN+IID N+YPVE AR+SN+RHRPIG+GVQGLADTFI+L FES
Sbjct: 461 DHDKLFEVTYQATVNLNRIIDGNFYPVEEARKSNMRHRPIGLGVQGLADTFIMLRYPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN++IFETIYY A+ S ++A EGPYETY SPVSKG+ Q DMW V P+ RW+W
Sbjct: 521 EEARALNREIFETIYYAAMTASKDLAMAEGPYETYAGSPVSKGVFQYDMWGVTPTSRWEW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ ++K GVRNSLLVAPMPTAST+QILGNNECFEPYTSNIY+RRVLSGEF++VNKHL
Sbjct: 581 DLLKEEVAKYGVRNSLLVAPMPTASTAQILGNNECFEPYTSNIYTRRVLSGEFIIVNKHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + G+W+ ++ K++ +GSVQ I EIP+ +K +YKT WEI Q +++ A DRG Y
Sbjct: 641 LKDLVKEGLWTKDMRQKLMAANGSVQNINEIPQYIKDLYKTAWEISQKAIIEQAADRGAY 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLNI M+ NF K+TS+HF W +GLKTGMYYLR++AA DAIKFTVD +V
Sbjct: 701 ICQSQSLNIFMENANFGKLTSMHFYGWKKGLKTGMYYLRTKAATDAIKFTVDKAV----T 756
Query: 781 EKPELV--VDDETKMAQVVCSLTNREECMAC 809
E+P + + E + A + CSL N + C C
Sbjct: 757 EEPAAISAAELEEQQAAIACSLDNPDNCEMC 787
>gi|255530603|ref|YP_003090975.1| ribonucleoside-diphosphate reductase subunit alpha [Pedobacter
heparinus DSM 2366]
gi|255343587|gb|ACU02913.1| ribonucleoside-diphosphate reductase, alpha subunit [Pedobacter
heparinus DSM 2366]
Length = 792
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/812 (66%), Positives = 654/812 (80%), Gaps = 25/812 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+EAV FDKITAR++KL YG + E DP+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGRKEAVRFDKITARIEKLCYGFNAELVDPIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++TT HPDYA LA+RIAVSNLHKNT KSFS+T++ +YN+ + ++ A LIADD+
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTTKSFSKTMEMLYNYVDSKTEKPASLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+E+I KNA LDS IIYDRDF +DYFGFKTLE+SYLLKV G++VERPQH+ MRV++GIHK
Sbjct: 121 WEVIEKNADILDSTIIYDRDFGFDYFGFKTLEKSYLLKVDGQIVERPQHLFMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY++MS+RWFTHA+PTLFNA TP+PQ+SSCFL+ M+DDSIEGIY+TLK+ A
Sbjct: 181 GDIDSAIETYNLMSERWFTHATPTLFNAATPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIGGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ FL+L+KNHGKEE RARDLFYALWV DLFM RV+ NG WSLFCP+EA GLA
Sbjct: 301 LEPWHADVLSFLDLRKNHGKEELRARDLFYALWVCDLFMRRVEENGDWSLFCPHEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EF+ LY YE+EG+A+K ++AQ LWF IL SQIETGTPY+L+KD N KSNQQNL
Sbjct: 361 DCFGEEFDALYERYEQEGRARKTIKAQELWFAILDSQIETGTPYLLYKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTS E AVCNLAS+ALPRFV N F
Sbjct: 421 GTIKSSNLCTEIIEYTSKDEVAVCNLASLALPRFV--------------------INGEF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL +VT T NLNKIID NYYPVE AR SN+RHRP+G+GVQGLAD FIL+ + FES
Sbjct: 461 DHQKLYDVTYQATVNLNKIIDYNYYPVEEARNSNMRHRPVGLGVQGLADAFILMRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
A+ LNK+IFETIY+ A+ S ++A K GPYET+ SP+S+G Q D+W V P S RWD
Sbjct: 521 EGARILNKEIFETIYFAAMTASHDLAVKNGPYETFKGSPLSQGKFQFDLWKVQPDSGRWD 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ + K+GV NSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKH
Sbjct: 581 WETLREKVVKDGVYNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL +G+W+P +K++II +GS+Q I EIP+ +K +YKTVWEIK +++DMA DRG
Sbjct: 641 LLKDLVALGLWTPAMKDRIILANGSIQDIAEIPDYIKELYKTVWEIKMRSIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE- 778
YI QSQSLN+ ++ PN K+TS+HF W +GLKTGMYYLR++AA+ A+KFTV+ K
Sbjct: 701 YICQSQSLNLFINAPNTSKLTSMHFYAWKKGLKTGMYYLRTQAASQAVKFTVENQAGKNM 760
Query: 779 KPEKPELVVDDETKMAQ-VVCSLTNREECMAC 809
+P PE + ++ + VCS+ E C++C
Sbjct: 761 EPVIPEHIEQSAEEIVEGPVCSM--EEGCISC 790
>gi|428184327|gb|EKX53182.1| hypothetical protein GUITHDRAFT_100891 [Guillardia theta CCMP2712]
Length = 806
Score = 1131 bits (2926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/826 (65%), Positives = 642/826 (77%), Gaps = 35/826 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKR+G+ E V FDKIT+R+ KLSYGL+ +P++++QK G+Y GV TSQLD LA
Sbjct: 1 MYVVKRNGKMERVQFDKITSRISKLSYGLNLNFVEPLVIAQKCVNGLYSGVKTSQLDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDY+ LAARIAVSNLHK TKK FSE + D Y + + SG K+ LIADD+
Sbjct: 61 AETAAYLTTEHPDYSILAARIAVSNLHKQTKKVFSEVMTDCYTYVDPSSGRKSQLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIM N LDS IIYDRD++YDYFGFKTLERSYLLK+ G+V ERPQHMLMRV+IGIHK
Sbjct: 121 YEIIMANKDQLDSAIIYDRDYNYDYFGFKTLERSYLLKLNGQVAERPQHMLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI AI+TY MSQ++FTHASPTLFN+GTP PQ+SSCFL+ MKDDSIEGIY+TLK CA
Sbjct: 181 QDIAGAIETYEYMSQKYFTHASPTLFNSGTPHPQMSSCFLLHMKDDSIEGIYDTLKVCAQ 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIR+ SYIRGTNGTSNG+VPMLRVFN TARYVDQGGGKR GAFA+Y
Sbjct: 241 ISKSAGGIGLSVHNIRSRNSYIRGTNGTSNGLVPMLRVFNSTARYVDQGGGKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+FEFL+L+KN G EE+R RDLF ALW+PDLFMERV+ N W LFCP E GL+
Sbjct: 301 LEPWHPDVFEFLDLRKNTGTEENRCRDLFLALWIPDLFMERVEKNEDWCLFCPCECPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LY YE+E KA+K V+AQ LWF IL +Q ETGTPY+LFKD CNRKSNQQNL
Sbjct: 361 DTWGEEFESLYLKYEKENKARKTVRAQELWFAILEAQTETGTPYILFKDHCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTSP E AVCNLASI LP F+++ F
Sbjct: 421 GTIKCSNLCTEIVEYTSPDEVAVCNLASIGLPMFIQDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ +KL EVT ++T NLNKIIDVNYYPVE AR SN+RHRPIGIGVQGLAD F L M F+S
Sbjct: 461 NHQKLMEVTQVITRNLNKIIDVNYYPVEEARLSNMRHRPIGIGVQGLADVFQKLRMPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A+ LN+DI ETIYY A+ S E+A K GPYETY SP SKGILQ DMW V PS RW+W
Sbjct: 521 ESAKALNRDIMETIYYGAVTASIELAEKFGPYETYQGSPASKGILQYDMWGVEPSSRWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+++ ++K+G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRV+SGEF VVN HL
Sbjct: 581 AEVKENLAKHGMRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVMSGEFAVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L +LTE+G+W+ +KN+I+ GSVQ I EIPE+++ IYKTVWE+K +L+DMA DRG +
Sbjct: 641 LKELTELGLWNKDMKNRILAAQGSVQGISEIPEDVREIYKTVWELKMRSLIDMAADRGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLN+ + PN K+TS+HF +W +GLKTG YYLR+R AADAI+FTVD S +
Sbjct: 701 IDQSQSLNLFIAAPNPSKLTSMHFYSWKKGLKTGCYYLRTRPAADAIQFTVDKSALQTSN 760
Query: 781 EKPELV----------VDDETKM-----AQVVCSLTNREECMACGS 811
++ + VDD+ + A++ CSL N++EC+ C S
Sbjct: 761 KENVMPSNTMGQLMKNVDDDIRQTQLAAAKLACSLKNKDECLMCSS 806
>gi|395521330|ref|XP_003764771.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Sarcophilus harrisii]
Length = 911
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/805 (67%), Positives = 644/805 (80%), Gaps = 20/805 (2%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGRQE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LAAET+A
Sbjct: 127 DGRQERVMFDKITSRIQKLCYGLNMEFVDPAQITMKVIQGLYSGVTTVELDTLAAETSAT 186
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
+TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A +I++
Sbjct: 187 LTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPFNGRHSPMVAKSTLDIVLA 246
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK+DID+A
Sbjct: 247 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAA 306
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+ISKSAG
Sbjct: 307 IETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAG 366
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH
Sbjct: 367 GIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHL 426
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+ N WSL CPNE GL D WG E
Sbjct: 427 DIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVENNQDWSLMCPNECPGLDDVWGEE 486
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNLGTIK S
Sbjct: 487 FEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCS 546
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEI+EYTS E AVCNLAS+AL FV + FDF+KLA
Sbjct: 547 NLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TLEHTFDFQKLA 587
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
EVT ++ NLNKII++NYYPV A SN RHRPIGIGVQGLAD FIL+ FESPEAQ L
Sbjct: 588 EVTKVIVRNLNKIININYYPVPEASLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLL 647
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
NK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW VL++
Sbjct: 648 NKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDWNVLKEK 707
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE
Sbjct: 708 IAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTE 767
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W+ +KN+II +GS+Q IPEIPE+LK +YKTVWEI Q T++ MA DRG +IDQSQS
Sbjct: 768 RGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAADRGAFIDQSQS 827
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELV 786
LNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ KEK EK
Sbjct: 828 LNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEK-EKVLKD 886
Query: 787 VDDETKMAQVVCSLTNREECMACGS 811
+ E A +VCSL NR+EC+ CGS
Sbjct: 887 EEKERNTAAMVCSLENRDECLMCGS 911
>gi|326435406|gb|EGD80976.1| Rrm1 protein [Salpingoeca sp. ATCC 50818]
Length = 779
Score = 1130 bits (2924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/811 (65%), Positives = 648/811 (79%), Gaps = 32/811 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR+E V FDKIT+R+ KLSYGL+TEH D V ++++V +GVY GVTT +LD+LA
Sbjct: 1 MYVVKRDGRKEKVLFDKITSRVSKLSYGLNTEHVDAVEITKRVISGVYTGVTTVELDQLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+ TT HPDYA LAARIAVSNLHK T K FS+ I ++++ N +G APLI+ +
Sbjct: 61 AETAASFTTKHPDYAILAARIAVSNLHKMTHKQFSDVIDALHHYVNPETGRPAPLISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M N +S II++RDF++++FGFKTLERSYLLK+ GKV ERPQHM MRV+IG+H
Sbjct: 121 YEQVMANKEVYNSHIIFERDFNFNFFGFKTLERSYLLKMNGKVAERPQHMFMRVAIGMHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D+AI+TY+ MS+ +FTHASPTLFN+GTP PQLSSCFL+ MKDDSIEGIY+TLK CA+
Sbjct: 181 EDVDAAIETYNYMSEGFFTHASPTLFNSGTPIPQLSSCFLLTMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+SVHNIRA+GSYI GTNG SNG+VPMLRVFN+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKTAGGIGLSVHNIRASGSYIAGTNGHSNGLVPMLRVFNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL LKKN G EE RARDLF+ALWVPDLFM+RV+ N +W+L CP+E GL+
Sbjct: 301 LEPWHADIFDFLELKKNTGVEEQRARDLFFALWVPDLFMKRVEANEEWTLMCPHECPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YE EGK +K V A LWF IL +Q ETGTPYML+KD CN+KSNQ+NL
Sbjct: 361 DTYGDEFERLYEKYEAEGKGRKKVSASKLWFAILDAQTETGTPYMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI SSNLCTEIIEY+SP E AVCNL SIAL +FV +K F
Sbjct: 421 GTIHSSNLCTEIIEYSSPDEVAVCNLGSIALNKFVGDKT--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D++KL EVT ++T NLNKIID+NYYPV AR+SN+RHRPIGIGVQGLAD FIL+ + F+S
Sbjct: 461 DYKKLHEVTKVLTRNLNKIIDINYYPVPEARKSNMRHRPIGIGVQGLADAFILMRLPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+++N+ IFETIY+ AL+ S+EIA+ EGPYET+ SP S+GILQ DMW+V P+D WDW
Sbjct: 521 DEAREVNRKIFETIYHGALEASTEIASVEGPYETFEGSPTSEGILQFDMWDVKPTDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + K+G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYSRRVLSGEF VVNKHL
Sbjct: 581 ESLRERVKKDGIRNSLLVAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQVVNKHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL EMG+WS +K++II ++GS+QKI IP+++K +YKTVWE+ Q TL+DMA DRG +
Sbjct: 641 LKDLVEMGLWSDEVKDQIILNNGSIQKIEGIPDDIKALYKTVWELSQRTLIDMAADRGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS N+H+ PNF K+TS+HF W RGLKTGMYYLRSRAA +AI+FTVD +E
Sbjct: 701 IDQSQSFNVHISDPNFGKLTSMHFYAWKRGLKTGMYYLRSRAATNAIQFTVDAKKAREAK 760
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
E A ++CS+ NR+EC+ C +
Sbjct: 761 E------------AAMMCSIDNRDECVMCSA 779
>gi|396462063|ref|XP_003835643.1| similar to ribonucleoside-diphosphate reductase subunit large
[Leptosphaeria maculans JN3]
gi|312212194|emb|CBX92278.1| similar to ribonucleoside-diphosphate reductase subunit large
[Leptosphaeria maculans JN3]
Length = 903
Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 631/777 (81%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS + D+Y++ N ++G P+I+D +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVHDLYSYVNPKNGKSQPMISDKV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M +A L+S ++YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YKIVMAHADELNSAVVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TY MSQ++FTHASPTLFNAGTP PQ+SSCFL+ MK+DSI+GIY+TLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHGKEE RARDLFYALW+PDLFM+RVQ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE++GK ++ V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKKGKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEYT+P E AVCNLAS+ALP FV K RG F
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPSFVDYK--------------RGE----F 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L + FES
Sbjct: 463 DFKKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL +S +IA + GPYETY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEAKKLNIQIFETIYHAALTSSCDIAKELGPYETYAGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I++ GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AALKEKIAQYGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II + GS+ +IP IPEE K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIAEGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALQ 759
>gi|410909836|ref|XP_003968396.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Takifugu rubripes]
Length = 794
Score = 1130 bits (2922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/814 (64%), Positives = 648/814 (79%), Gaps = 23/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNADFVDPAQITMKVIQGLYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N + +P+++ +
Sbjct: 61 AEISATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPLNKRHSPMVSKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+++N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH+
Sbjct: 121 LDIVLQNKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IR+TGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRSTGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+FL LKKN GKEE RARDLFY +W+PDLFM+RV++N WSL CP+E GL
Sbjct: 301 LEPWHSDIFDFLELKKNTGKEEQRARDLFYGMWIPDLFMKRVESNQDWSLMCPDECPGLN 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFEKLYT YE+EG+ K+VV+AQ +W I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYTKYEKEGRVKRVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKSSNLCTEIVEYTSSDEVAVCNLASVALNMYV-------------------TAERTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA VT +V +NLNKIID+NYYPV A +SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFQKLAAVTKVVVKNLNKIIDINYYPVPEAEKSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LN IFETIYY AL+ S E+AA+ GPYETY SPVSKGILQ DMW P+D DW
Sbjct: 522 PEAQLLNTQIFETIYYAALEASCELAAELGPYETYEGSPVSKGILQYDMWEKTPTDLLDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KNK+I +GS+Q I IP ++K +YKTVWEI Q T++ MA DRG +
Sbjct: 642 LKDLTERGLWNEDMKNKLIAHNGSIQNINGIPNDVKQLYKTVWEISQKTIIKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ AA+ I+FT++ KE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKET- 760
Query: 781 EKPELVVDDETK---MAQVVCSLTNREECMACGS 811
+ P ++E K MA +VCSL NR+EC+ CGS
Sbjct: 761 QDPVKASEEEVKERNMAAMVCSLQNRDECLMCGS 794
>gi|169603614|ref|XP_001795228.1| hypothetical protein SNOG_04815 [Phaeosphaeria nodorum SN15]
gi|111066086|gb|EAT87206.1| hypothetical protein SNOG_04815 [Phaeosphaeria nodorum SN15]
Length = 903
Score = 1129 bits (2921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/777 (67%), Positives = 627/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL +H DP ++ KV +GVY GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYHGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS + D+Y + N ++G P+I+D I
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYTYVNPKNGKSQPMISDYI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 121 YKIIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TY MSQ++FTHASPTLFNAGTP PQ+SSCFL+ MK+DSI+GIY+TLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPNPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHGKEE RARDLFYALW+PDLFM+RVQ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YERE K ++ V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEELYTRYERENKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+E+T+P E AVCNLAS+ALP FV K RG F
Sbjct: 421 GTIRSSNLCTEIVEFTAPDEVAVCNLASLALPSFVDYK--------------RGE----F 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L + FES
Sbjct: 463 DFHKLHEVTMVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL +S +IA + GPY TY SPVSKG LQ D+W V PSD WDW
Sbjct: 523 PEAKKLNTQIFETIYHAALTSSCDIAKELGPYATYEGSPVSKGQLQYDLWGVTPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKDKIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+Q+IP IPEE K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIADGGSIQRIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALQ 759
>gi|149279600|ref|ZP_01885729.1| ribonucleoside diphosphate reductase, alpha subunit [Pedobacter sp.
BAL39]
gi|149229636|gb|EDM35026.1| ribonucleoside diphosphate reductase, alpha subunit [Pedobacter sp.
BAL39]
Length = 792
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/812 (65%), Positives = 654/812 (80%), Gaps = 25/812 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+EAV FDKITAR++KL YG + E DP+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGRKEAVRFDKITARIEKLCYGFNAELVDPIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++TT HPDYA LA+RIAVSNLHKNT KSFS+T++ +Y + + ++ A LIADD+
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTTKSFSKTMEMLYKYVDSKTDKSASLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+E+I +NA LDS IIYDRDF +DYFGFKTLE+SYLLK++G++VERPQH+ MRV++GIHK
Sbjct: 121 WEVIQENADILDSTIIYDRDFGFDYFGFKTLEKSYLLKIEGQIVERPQHLFMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAIKTY++MS+RWFTHA+PTLFNA TP+PQ+SSCFL+ M+DDSIEGIY+TLK+ A
Sbjct: 181 SDIDSAIKTYNLMSERWFTHATPTLFNAATPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIGGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHGKEE RARDLFYALWV DLFM+RV+ N WSLFCP+EA GLA
Sbjct: 301 LEPWHADVFSFLDLRKNHGKEELRARDLFYALWVCDLFMKRVEANEDWSLFCPHEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+EG+A+K V+AQ LWF IL SQIETGTPY+L+KD N KSNQQNL
Sbjct: 361 DCFGDEFEALYERYEKEGRARKTVKAQELWFAILDSQIETGTPYLLYKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYTS E AVCNLAS+ALPRFV N F
Sbjct: 421 GTIKSSNLCTEIIEYTSKDEVAVCNLASLALPRFV--------------------INGEF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL +VT T NLNKIID NYYPVE A+ SN+RHRP+G+GVQGLAD FIL+ + FES
Sbjct: 461 DHQKLYDVTYQATLNLNKIIDYNYYPVEEAKNSNMRHRPVGLGVQGLADAFILMRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
A+ LNK+IFETIY+ A+ S ++A GPY+T+ SP+S+G Q D+WNV P S RWD
Sbjct: 521 DGARLLNKEIFETIYFAAMTASHDLAVVNGPYQTFKGSPLSQGKFQFDLWNVTPDSGRWD 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ + K+GV NSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKH
Sbjct: 581 WESLREKVVKDGVYNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL +G+W+P +K++II +GS+Q I EIP+ +K +YKTVWEIK +++DMA DRG
Sbjct: 641 LLKDLVALGLWTPAMKDRIILANGSIQDIAEIPDYIKELYKTVWEIKMRSIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE- 778
YI QSQSLN+ ++ PN K+TS+HF W +GLKTGMYYLR++AA+ A+KFTV+ K
Sbjct: 701 YICQSQSLNLFINAPNTSKLTSMHFYAWKKGLKTGMYYLRTQAASQAVKFTVENQAGKNM 760
Query: 779 KPEKPELVVDDETKMAQ-VVCSLTNREECMAC 809
+P P+ + ++ VCS+ E C++C
Sbjct: 761 EPVIPDHIDQPVEEITDGPVCSM--EEGCISC 790
>gi|189196218|ref|XP_001934447.1| ribonucleoside-diphosphate reductase large chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187980326|gb|EDU46952.1| ribonucleoside-diphosphate reductase large chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 795
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/811 (65%), Positives = 639/811 (78%), Gaps = 20/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS ++D+Y++ N ++G P+I+D +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVEDLYSYVNPKNGKSQPMISDHV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 121 YKVIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI AI+TY MSQ++FTHASPTLFNAGTP PQ+SSCFL+ MK+DSI+GIY+TLK CA+
Sbjct: 181 EDIPKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHGKEE RARDLFYALW+PDLFM+RVQ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE++ K ++ V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLAS+ALP FV K RG F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFVDYK--------------RGE----F 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L + FES
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ AL +S EIA + GPY+TY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 EEAKKLNIQIFETIYHAALTSSCEIAKELGPYQTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKAKIAEHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+ +IP IPEE K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIADGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 EKPELVVDDETKMAQVV--CSLTNREECMAC 809
D A V CS+ N E C+ C
Sbjct: 763 TNIANEARDGDIYADAVLACSIENPESCVMC 793
>gi|400598307|gb|EJP66024.1| ribonucleoside-diphosphate reductase large chain [Beauveria
bassiana ARSEF 2860]
Length = 906
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/777 (67%), Positives = 623/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL TEH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S I D+Y++ N R+ +P+IA
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVISDLYHYVNPRNDRASPMIAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+I+ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DNIERVIQTYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKSCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREGK +K V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEREGKGRKTVKAQKLWYSILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY +P ETAVCNLAS+ALP +V +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDETAVCNLASLALPAYV------------------DYNQGVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLN+IIDVN+YP+ AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHEVTMVVVRNLNRIIDVNHYPIPEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S E+A +EGPYE++ SP S+GILQ DMWNV PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTASVELAKEEGPYESFKGSPASEGILQHDMWNVKPSDLWEW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DELREQVKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II ++GS+Q IP IP ++K +YKTVWEI Q ++ MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRQVIQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMRDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|346327607|gb|EGX97203.1| ribonucleoside-diphosphate reductase large chain [Cordyceps
militaris CM01]
Length = 904
Score = 1127 bits (2915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/777 (67%), Positives = 624/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL TEH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S I D+Y++ N R+ +P+IA
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVISDLYHYVNPRNDRASPMIAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+I+ ++TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DNIERVVQTYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKSCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGMNVHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE +GK +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYELDGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY +P ETAVCNLAS+ALP +V +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDETAVCNLASLALPAYV------------------DYNQGVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLN+IIDVN+YP+ AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHEVTMVVVRNLNRIIDVNHYPIPEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL +S E+A +EGPY+++ SPVS+GILQ DMWNV PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTSSMELAKEEGPYQSFKGSPVSEGILQFDMWNVKPSDLWEW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DELREQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D+GS+Q IP IP ++K +YKTVWEI Q +V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIADNGSIQNIPNIPADIKALYKTVWEISQRQIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMRDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|432890244|ref|XP_004075435.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oryzias latipes]
Length = 794
Score = 1126 bits (2913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/813 (64%), Positives = 647/813 (79%), Gaps = 22/813 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQE V FDKIT+R++KL YGL++E DP ++ KV G+Y GVTT +LD LA
Sbjct: 2 MYVIKRDGRQERVMFDKITSRIQKLCYGLNSEFVDPAQITMKVIQGLYSGVTTVELDTLA 61
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +TT +PDYA LAARIAVSNLHK TKK FSE ++D+Y++ N + +P+I+ +
Sbjct: 62 AEIAATLTTKYPDYAILAARIAVSNLHKETKKVFSEVMEDLYSYVNPLNKCHSPMISKET 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+++N L+S II+DRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV++GIH
Sbjct: 122 LDIVLENKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+ID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 182 RNIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IR+TGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKSAGGIGVAVSCIRSTGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 301
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL LKKN GKEE RARDLFYALW+PDLFM+RV++N WSL CPNE GL
Sbjct: 302 LEPWHFDVFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVESNQDWSLMCPNECPGLD 361
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFE+LYT YEREG+ K+VV+AQ LW ++ SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 362 ECWGVEFEELYTKYEREGRVKRVVKAQQLWHAVIESQTETGTPYMLYKDACNKKSNQQNL 421
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL +V + R F
Sbjct: 422 GTIKCSNLCTEIVEYTSHDEVAVCNLASIALNMYV-------------------TPERTF 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA VT ++ +NLNKIID+NYYPV A +SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 463 DFKKLASVTKVIVKNLNKIIDINYYPVPEAEKSNKRHRPIGIGVQGLADAFILMRYPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LN IFETIYY AL+ S E+AA+ GPYETY PVS+G+LQ DMW P+D WDW
Sbjct: 523 PEAQLLNIQIFETIYYAALEASCELAAELGPYETYDGCPVSRGVLQYDMWEKTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 583 KLLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+WS +KNK+I ++GS+Q I EIP +LK +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLTERGLWSEEMKNKLIGNNGSIQDIAEIPNDLKQLYKTVWEISQKTVLKMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ AA+ I+FT++ KE
Sbjct: 703 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKEGQ 762
Query: 779 KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ PE E A +VCSL NR++C+ CGS
Sbjct: 763 SSKMPEQDA-KERNTAAMVCSLENRDDCLMCGS 794
>gi|452004087|gb|EMD96543.1| hypothetical protein COCHEDRAFT_1220161 [Cochliobolus
heterostrophus C5]
Length = 897
Score = 1126 bits (2913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/777 (66%), Positives = 628/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GV T+QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVNTTQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS + D+YN+ N ++G P+I+D +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVADLYNYVNPKNGKHQPMISDSV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 121 YKVIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRIDGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TY MSQ++FTHASPTLFNAGTP PQ+SSCFL+ MK+DSI+GIY+TLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHGKEE RARDLFYALW+PDLFM+RVQ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE++ K ++ V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLAS+ALP FV K RG F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFVDYK--------------RGE----F 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L + FES
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ AL +S +IA + GPYETY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 AEAKKLNIQIFETIYHAALTSSCDIAKELGPYETYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AELKAKIAQHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II + GS+ +IP IPEE K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIAEGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALK 759
>gi|431797144|ref|YP_007224048.1| ribonucleoside-diphosphate reductase subunit alpha [Echinicola
vietnamensis DSM 17526]
gi|430787909|gb|AGA78038.1| ribonucleoside-diphosphate reductase, alpha subunit [Echinicola
vietnamensis DSM 17526]
Length = 799
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/814 (64%), Positives = 651/814 (79%), Gaps = 18/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E+V FDKIT R++ L GL + + P+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCDGLDSRYIQPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A+MT HPDYA LAARIA+SNLHK T +SFS T+K +Y + N ++G A LIA D+
Sbjct: 61 AEVCASMTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYVNPKTGDNAALIAPDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ K+AA LD I Y RDF+YD+FGFKTLERSYL+K+ KVVERPQHMLMRV+IGIHK
Sbjct: 121 YGIVKKHAARLDEIIDYSRDFNYDFFGFKTLERSYLIKLDDKVVERPQHMLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D+AI+TYH++S++WFTHA+PTLFNAGTP+PQLSSCFL+ MK+DSI+GIY+TLK+CA
Sbjct: 181 EDLDAAIETYHLLSEKWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHDVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL LKKNHGKEE RARDLFYALW+ DLFM+RV+ N +WSLFCPNEA GL+
Sbjct: 301 LEPWHADIKDFLELKKNHGKEELRARDLFYALWISDLFMKRVEANEEWSLFCPNEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+C G EFEKLY YE+EG+A++ V+AQ LWFE+L SQIETGTPYML+KD N KSNQ+NL
Sbjct: 361 ECHGEEFEKLYEKYEKEGRARETVKAQELWFEVLESQIETGTPYMLYKDAANGKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTSP E AVCNLASIALP+F++ S+G K+ F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASIALPKFIK-------------TDSQGKKS--F 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL E+T +VT+NLN++ID+NYYPV+ A +SN RHRPIGIGVQGLAD FI+L M F+S
Sbjct: 466 DHQKLYEITKVVTKNLNRVIDINYYPVKEAEKSNFRHRPIGIGVQGLADAFIMLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
EA LN+DIFETIYY A++TS E+A G YETY SPVS+G Q D+W V P S RW+
Sbjct: 526 AEAAGLNEDIFETIYYAAMETSMELAKVHGTYETYEGSPVSQGQFQFDLWGVTPKSGRWN 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ ++K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WADLKERVAKFGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL +G+W+ ++KN++I +GSVQ +PE+P+ +K +YKTVWEI Q +++MA DRG
Sbjct: 646 LMKDLIRLGLWNDSMKNRLIAANGSVQDMPEVPQNIKDLYKTVWEISQKVVINMAADRGA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQS+N+ M +PNF K+TS+HF W +GLKTGMYYLRS+AA AI+FTVD K
Sbjct: 706 YICQSQSMNVFMQEPNFGKLTSMHFYAWKKGLKTGMYYLRSKAATSAIQFTVDKESLKNS 765
Query: 780 PEKPELVVDDETKMAQ--VVCSLTNREECMACGS 811
+ + +Q + CSL N ++C CGS
Sbjct: 766 QQATAATEEPNKANSQDAIACSLDNPDDCEMCGS 799
>gi|72084113|ref|XP_780425.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Strongylocentrotus purpuratus]
Length = 797
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/813 (65%), Positives = 652/813 (80%), Gaps = 23/813 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KRDGR+E V FDKIT+R+++L Y L+++ DP +++ KV +GVY GVTT +LD LAA
Sbjct: 5 YVQKRDGRKEIVMFDKITSRIQRLCYNLNSDFIDPAVITMKVISGVYPGVTTVELDTLAA 64
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA MTT HPDYA LAARIAVSNLHK TKK FS +KD++ + N R+GL +PLI+++
Sbjct: 65 ETAATMTTKHPDYAVLAARIAVSNLHKETKKLFSAVMKDLFEYTNPRNGLHSPLISEETM 124
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
II NA L+S ++YDRDF+Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH
Sbjct: 125 MIINDNADRLNSAVLYDRDFEYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHGK 184
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID+AI+TY+++S RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSI+GIYETLK CA+I
Sbjct: 185 DIDAAIQTYNLLSDRWFTHASPTLFNAGTNRPQLSSCFLLTMKDDSIDGIYETLKNCALI 244
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++HNIRA+GSYI GTNG SNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 245 SKTAGGIGLNIHNIRASGSYIAGTNGNSNGLLPMLRVYNNTARYVDQGGNKRPGAFAIYL 304
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADIF+FL+ KKNHGKEE RARDLFY LW+PDLFM+RV+ +G W+L CP+E+ GL +
Sbjct: 305 EPWHADIFDFLDCKKNHGKEEQRARDLFYGLWIPDLFMKRVEADGDWTLMCPHESPGLHE 364
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EFE LY YE+ G+ +K ++AQ LW+ I+ SQ ETGTPYM++KD CN+KSNQQNLG
Sbjct: 365 VWGEEFETLYEGYEKAGRGRKTIKAQALWYAIIESQTETGTPYMVYKDHCNKKSNQQNLG 424
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEI+EY+S E AVCNLASIALPRFV++ R FD
Sbjct: 425 TIKCSNLCTEIVEYSSADEVAVCNLASIALPRFVQD--------------------RTFD 464
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL EVT ++TENLNKIID+NYYPV A+RSN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 465 FKKLEEVTMVITENLNKIIDINYYPVPEAKRSNFRHRPIGIGVQGLADAFILMRFPFESV 524
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA++LN IFETIYY ALK S +IAAK GPYETY SPVSKGILQ DMW V P+D DW
Sbjct: 525 EAKKLNIQIFETIYYAALKASCKIAAKLGPYETYKGSPVSKGILQQDMWGVTPTDLHDWA 584
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HLL
Sbjct: 585 SLKADIAKHGVRNSLLLAPMPTASTAQILGNNEAIEPYTSNIYTRRVLSGEFQVVNHHLL 644
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DLT+MG+WS +KN +I ++GS+Q IP IP+++K +YKTVWEI Q T++ MAVDRG YI
Sbjct: 645 RDLTDMGLWSDEMKNNLIANNGSIQNIPTIPDDIKALYKTVWEISQKTIIQMAVDRGAYI 704
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
DQSQSLNIH+ +PN+ K+TS+HF W GLKTGMYYLR+R AAD IKFT+D KEK
Sbjct: 705 DQSQSLNIHIAEPNYGKLTSMHFFAWKSGLKTGMYYLRTRPAADPIKFTLDKLSLKEKSG 764
Query: 782 KPELVVDDETKM---AQVVCSLTNREECMACGS 811
+++ + A ++CSL N++ C++CGS
Sbjct: 765 AKLTEAEEKERAKNEAAMMCSLENKDACVSCGS 797
>gi|443684165|gb|ELT88174.1| hypothetical protein CAPTEDRAFT_228855 [Capitella teleta]
Length = 790
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/809 (64%), Positives = 651/809 (80%), Gaps = 21/809 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+EAVHFDKIT+R+ KL Y L+++ DP ++ K G+Y GVTT +LD LA
Sbjct: 1 MFVQKRDGREEAVHFDKITSRISKLCYHLNSDFVDPAQITMKCINGLYPGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FSE + D+Y + N ++ + +P+I+ ++
Sbjct: 61 AETAATMTVKHPDYAILAARIAVSNLHKETKKVFSEVMNDLYTYVNPKNDIHSPMISKEL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ +NA L+S IIYDRD+ Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH
Sbjct: 121 LDIVTENADRLNSAIIYDRDYSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+D AI+TY+++S++WFTHASPTLFNAGT RPQ+SSCFL+ M DSIEGIY+TLK+CA+
Sbjct: 181 RDLDRAIETYNLLSEKWFTHASPTLFNAGTNRPQMSSCFLLTMAGDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRATGS+I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLNVHCIRATGSFISGTNGTSNGLLPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+FL+ +KN GKEE RARDLFYALW+PDLFM+RV+ NG WSL CP+E+ GL+
Sbjct: 301 LEPWHADVFDFLDCRKNTGKEEQRARDLFYALWIPDLFMKRVEQNGDWSLMCPHESPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LY YE+EG+ +K ++AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DVWGEEFEALYEKYEKEGRVRKTIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY++P E AVCNLASIAL RFV+ ++ F
Sbjct: 421 GTIKCSNLCTEIVEYSAPDEVAVCNLASIALNRFVKS-------------------DKTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT ++ NLNKIIDVN+YPV AR+SN+RHRPIGIGVQGLADTFIL+ F+S
Sbjct: 462 DFDKLIEVTGVIVRNLNKIIDVNFYPVPEARKSNMRHRPIGIGVQGLADTFILMRFPFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ+LN+DIFETIYY ALK S ++A +EG Y+TY PVSKGILQ DMW+V +DR DW
Sbjct: 522 PEAQKLNRDIFETIYYGALKMSCQLAQEEGAYQTYAGCPVSKGILQHDMWDV-KADRHDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 DGLRADIKKHGVRNSLLMAPMPTASTAQILGNNESTEPYTSNIYTRRVLSGEFQVVNHHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN++I +GS+Q+I IP++LK +YKTVWEIKQ +++MA +RG +
Sbjct: 641 LKDLTENGLWNDDMKNRMISSNGSIQEIEGIPDDLKALYKTVWEIKQKVVLNMAAERGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ ++TS+HF W GLKTGMYYLR++ AA AI+FTVD S K+K
Sbjct: 701 IDQSQSLNIHIAEPNYGRLTSMHFYAWKLGLKTGMYYLRTKPAAQAIQFTVDKSKLKKKT 760
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMAC 809
E +E MA +VCSL N++EC+ C
Sbjct: 761 PTGESKKSEEN-MAAMVCSLDNKDECIMC 788
>gi|61557388|ref|NP_001013254.1| ribonucleotide reductase M1 [Rattus norvegicus]
gi|55250768|gb|AAH85906.1| Ribonucleotide reductase M1 [Rattus norvegicus]
gi|149068638|gb|EDM18190.1| ribonucleotide reductase M1 (mapped), isoform CRA_b [Rattus
norvegicus]
Length = 792
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/811 (66%), Positives = 651/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
EI+M + L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LEIVMAHKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIPE+LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|375013327|ref|YP_004990315.1| ribonucleoside-diphosphate reductase subunit alpha [Owenweeksia
hongkongensis DSM 17368]
gi|359349251|gb|AEV33670.1| ribonucleoside-diphosphate reductase, alpha subunit [Owenweeksia
hongkongensis DSM 17368]
Length = 821
Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/842 (63%), Positives = 656/842 (77%), Gaps = 52/842 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E++ FDKITAR++KL YGLS E DP V+ KV G+Y+GVTTS+LD LA
Sbjct: 1 MYVLKRDGRKESIKFDKITARIQKLCYGLS-ELVDPTTVAMKVIEGIYEGVTTSELDSLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A+MTT HPDYA LAARIAVSNLHKNT KSFSET+KD+ + N ++GL +PLIADD+
Sbjct: 60 AEVSASMTTRHPDYAQLAARIAVSNLHKNTTKSFSETMKDLKEYVNPKTGLHSPLIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEII KNAA LDS +IYDRDF YDYFGFKTLERSYLL+V G++ ERPQHMLMRV+IGIHK
Sbjct: 120 YEIIEKNAAHLDSTLIYDRDFGYDYFGFKTLERSYLLRVNGQIAERPQHMLMRVAIGIHK 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+++A++TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GIY+TLK+C+
Sbjct: 180 EDLEAAVETYDLMSKKYFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQCSK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL+LKKNHGKEE RARDLFYALW PDLFM+RV+ G W+L PNE GL
Sbjct: 300 LEPWHADIFDFLDLKKNHGKEEMRARDLFYALWTPDLFMKRVKEGGDWTLMDPNECPGLC 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +FE+LYT YE+EGK +K V+A++LW +I SQIETGTPYML+KD N KSNQ+NL
Sbjct: 360 DVYGEKFEELYTKYEQEGKGRKTVKARDLWGKITESQIETGTPYMLYKDAANEKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLASIALP ++ E F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASIALPMYIEEGK--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL +VT VT+NLN+IID NYYPV AR SN+RHRP+G+GVQGLADTFI L ++F S
Sbjct: 460 DHQKLYDVTYKVTKNLNRIIDRNYYPVAEARNSNMRHRPVGLGVQGLADTFIKLRLSFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
EA+QLNKDIFETIYY AL S + A ++G YET+ SP+SKG Q +MW + D
Sbjct: 520 DEAKQLNKDIFETIYYAALCASKDEAIQDGAYETFEGSPISKGEFQFNMWGISEDDLSGN 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + + GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWKALRKEVMEKGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL ++G+WS +KN II +GS+Q I IP+ LK IYKTVWE+ ++DM+ DR
Sbjct: 640 KHLLIDLVDLGLWSEDLKNDIIRANGSIQNIDIIPDNLKEIYKTVWEMSMKDIIDMSADR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD----- 772
G +IDQSQSLN+ M+ N K+TS+HF W +GLKTGMYYLR++AA+DAIKFTV
Sbjct: 700 GWFIDQSQSLNLFMENANIGKLTSMHFYAWEKGLKTGMYYLRTKAASDAIKFTVQKQSKA 759
Query: 773 ----------TSVFKEKPEKPELVVDDETKMAQ-------------VVCSLTNREECMAC 809
T +EK + E ++A+ + CS+ N ++C AC
Sbjct: 760 EVTPVTDSKQTEKIQEKESVQKANSLGEKRVAEMAERVNNFSDEEVIACSIDNPDDCEAC 819
Query: 810 GS 811
GS
Sbjct: 820 GS 821
>gi|348534733|ref|XP_003454856.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oreochromis niloticus]
Length = 793
Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/814 (64%), Positives = 645/814 (79%), Gaps = 24/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGRQE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNMEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +TT +PDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N + +P+++ D
Sbjct: 61 AEIAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPLNKRHSPMVSKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV++GIH
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK CA+
Sbjct: 181 TDIEAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKHCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IR+TGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRSTGSYIAGTNGCSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL LKKN GKEE RARDLFYALW+PDLFM+RV+ N WSL CP + GL
Sbjct: 301 LEPWHFDVFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVENNEDWSLMCPADCPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFE+LYT YEREG+ K+VV+AQ LW+ I+ SQ ETGTPYM++KD CNRKSNQQNL
Sbjct: 361 ECWGEEFEELYTRYEREGRVKRVVKAQQLWYAIIESQTETGTPYMVYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL +V + R +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPERTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA VT ++ NLNK+ID+NYYPVE ARRSN+RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAYVTKVIVRNLNKVIDINYYPVEEARRSNMRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LN IFETIYY AL+ S E+AA+ G YETY SPVSKGILQ DMW P+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAELGTYETYEGSPVSKGILQYDMWEKTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN++I +GS+Q I EIP++LK +YKTVWEI Q T++ MA DRG Y
Sbjct: 642 LKDLTERGLWNEEMKNQLIAHNGSIQNINEIPDDLKQLYKTVWEISQKTVLKMAADRGAY 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ AA+ I+FT++ KE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKEA- 760
Query: 781 EKPELVVDDETK---MAQVVCSLTNREECMACGS 811
+P + E K A +VCSL N++EC+ CGS
Sbjct: 761 -QPATSSEQEIKERNKAAMVCSLENKDECLMCGS 793
>gi|31982026|ref|NP_033129.2| ribonucleoside-diphosphate reductase large subunit [Mus musculus]
gi|341941976|sp|P07742.2|RIR1_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|16741219|gb|AAH16450.1| Ribonucleotide reductase M1 [Mus musculus]
gi|26352964|dbj|BAC40112.1| unnamed protein product [Mus musculus]
gi|74205882|dbj|BAE23230.1| unnamed protein product [Mus musculus]
gi|74214440|dbj|BAE40455.1| unnamed protein product [Mus musculus]
gi|148684655|gb|EDL16602.1| ribonucleotide reductase M1, isoform CRA_b [Mus musculus]
Length = 792
Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/811 (66%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+M N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S E+A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|451855061|gb|EMD68353.1| hypothetical protein COCSADRAFT_33284 [Cochliobolus sativus ND90Pr]
Length = 897
Score = 1125 bits (2909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 628/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GV T+QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVNTTQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS + D+YN+ N ++G P+I+D +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVADLYNYVNPKNGKHQPMISDFV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 121 YKIIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRIDGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TY MSQ++FTHASPTLFNAGTP PQ+SSCFL+ MK+DSI+GIY+TLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHGKEE RARDLFYALW+PDLFM+RVQ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE++ K ++ V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLAS+ALP FV K RG F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFVDYK--------------RGE----F 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L + FES
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ AL +S +IA + GPYETY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 AEAKKLNIQIFETIYHAALTSSCDIAKELGPYETYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AELKAKIAQHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II + GS+ +IP IPEE K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIAEGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALK 759
>gi|354495277|ref|XP_003509757.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Cricetulus griseus]
gi|344240187|gb|EGV96290.1| Ribonucleoside-diphosphate reductase large subunit [Cricetulus
griseus]
Length = 792
Score = 1124 bits (2908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/811 (65%), Positives = 651/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLHNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+M N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV+P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVVPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q I EIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSISEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDRE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|83769274|dbj|BAE59411.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 794
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/810 (64%), Positives = 638/810 (78%), Gaps = 19/810 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYINPKNKKPAPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRVS+GIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRIDGKVAERPQHLLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TYH+MSQ++FTHASPTLFNAGTP+PQL+SCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 NDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYERYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEYT+P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV ++ NLNKIID+NYYPV A+ SN+RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKNSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL SS++A G YE+Y SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 PEAKQLNTQIFETIYHGALTASSDLAKDFGTYESYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II + GSVQ IP IP ++K +YKTVWEI Q +++ MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAY 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEALKVAD 762
Query: 781 EKPELVVDDETKMAQVV-CSLTNREECMAC 809
K A+V+ CS+ N+E C+ C
Sbjct: 763 TNVARANASFRKRAKVLQCSIENKEACLMC 792
>gi|200765|gb|AAA40061.1| ribonucleotide reductase subunit M1 [Mus musculus]
Length = 792
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 649/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+M N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHA PTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHAPPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S E+A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|322696603|gb|EFY88393.1| ribonucleoside-diphosphate reductase large chain [Metarhizium
acridum CQMa 102]
Length = 905
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/772 (67%), Positives = 625/772 (80%), Gaps = 18/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL TEH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++ +P+I+ D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNERASPMISKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+I+ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DNIERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREGK ++ V+AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGKGRRTVRAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY++P E AVCNLAS+ALP F V+ + R +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAF-------VDYNEGR-----------Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLNKIIDVNYYPV+ AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNYYPVQEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S E+A ++GPY T+ SP S+GILQ DMWNV PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTASMELAKEQGPYSTFKGSPASEGILQFDMWNVTPSDLWEW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DTLKQQIKEHGIRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II ++GS+Q IP IP ++K +YKTVWEI Q +V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIHM P+ K+TS+HF W GLKTGMYYLR++AAA I+FTVD
Sbjct: 703 IDQSQSLNIHMKDPSMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVD 754
>gi|4506749|ref|NP_001024.1| ribonucleoside-diphosphate reductase large subunit [Homo sapiens]
gi|132608|sp|P23921.1|RIR1_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|323714413|pdb|3HNC|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
gi|323714414|pdb|3HNC|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
gi|323714415|pdb|3HND|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
gi|323714416|pdb|3HND|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
gi|323714417|pdb|3HNE|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
gi|323714418|pdb|3HNE|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
gi|323714419|pdb|3HNF|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
gi|323714420|pdb|3HNF|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
gi|36065|emb|CAA42118.1| M1 subunit of ribonucleotide reductase [Homo sapiens]
gi|36153|emb|CAA42180.1| large subunit ribonucleotide reductase [Homo sapiens]
gi|13676332|gb|AAH06498.1| Ribonucleotide reductase M1 [Homo sapiens]
gi|119622988|gb|EAX02583.1| ribonucleotide reductase M1 polypeptide [Homo sapiens]
gi|123991808|gb|ABM83954.1| ribonucleotide reductase M1 polypeptide [synthetic construct]
gi|123999422|gb|ABM87271.1| ribonucleotide reductase M1 polypeptide [synthetic construct]
Length = 792
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VL++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|330929115|ref|XP_003302526.1| hypothetical protein PTT_14367 [Pyrenophora teres f. teres 0-1]
gi|311322081|gb|EFQ89385.1| hypothetical protein PTT_14367 [Pyrenophora teres f. teres 0-1]
Length = 889
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 627/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS ++D+Y + N ++G P+I+D +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVEDLYTYVNPKNGKSQPMISDHV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 121 YKIIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI AI+TY MSQ++FTHASPTLFNAGTP PQ+SSCFL+ MK+DSI+GIY+TLK CA+
Sbjct: 181 EDIPKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHGKEE RARDLFYALW+PDLFM+RVQ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE++ K ++ V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLAS+ALP FV K RG F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFVDYK--------------RGE----F 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L + FES
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ AL +S +IA + GPY+TY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 EEAKKLNIQIFETIYHAALTSSCDIAKELGPYQTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKAKIAEHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+ +IP IPEE K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIADGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|42490975|gb|AAH66217.1| Ribonucleotide reductase M1 [Mus musculus]
Length = 792
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 649/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+M N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S E+A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK + KTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLCKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERDTAAMVCSLENREECLMCGS 792
>gi|260789736|ref|XP_002589901.1| hypothetical protein BRAFLDRAFT_266176 [Branchiostoma floridae]
gi|229275086|gb|EEN45912.1| hypothetical protein BRAFLDRAFT_266176 [Branchiostoma floridae]
Length = 787
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/811 (63%), Positives = 640/811 (78%), Gaps = 24/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQE VHFDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MYVLKRDGRQEKVHFDKITSRIQKLCYGLNMDFVDPTKITMKVINGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA+LAARIA+SNLHK TKK+F++ ++D+YN N ++ +P+I+ +
Sbjct: 61 AETAATMTVKHPDYATLAARIAISNLHKETKKAFTDVMEDLYNWVNPKTNQHSPMISKKL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ KNA L+S IIYDRDF Y YFG KTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 121 MDLVTKNADRLNSAIIYDRDFKYTYFGIKTLERSYLLRIDGKVAERPQHMLMRVALGIHY 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D+AI+TY++MS++ FTHASPTLFNAGT +PQLSSCFL+ MKDDSI+GIYETLK+CA+
Sbjct: 181 EDLDAAIETYNLMSEKKFTHASPTLFNAGTNKPQLSSCFLLTMKDDSIDGIYETLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IRA+GS+I GTNGTSNG++PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNIHKIRASGSFIAGTNGTSNGLLPMLRVFNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+ +KN GKEE RARDLFYA+W+PDLFM+RV+ NG+W+L CP+E GL
Sbjct: 301 LEPWHADIFEFLDARKNTGKEEQRARDLFYAMWIPDLFMKRVEENGEWTLMCPHECPGLE 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFEKLY YE+ GK ++ V+AQ +W+ I+ +Q ETG PYML+KD CN KSNQQNL
Sbjct: 361 DCWGEEFEKLYEGYEKAGKGRRTVKAQQVWYAIIEAQTETGNPYMLYKDACNSKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTSP E AVCNLASIA+ +V+ +
Sbjct: 421 GTIKCSNLCTEIVEYTSPDEVAVCNLASIAVNMYVKPDGT-------------------Y 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL EVT ++T NLNKIIDVNYYPV A SN +HRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFEKLKEVTVVITRNLNKIIDVNYYPVPEAENSNKKHRPIGIGVQGLADCFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY A++ S EIA + GPYETY PVSKGI Q DMWNV P+D WDW
Sbjct: 522 EEAQHLNKQIFETIYYGAMQASCEIAKELGPYETYEGCPVSKGIFQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ + ++GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF VVN HL
Sbjct: 582 AALKEQVKQHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQVVNHHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DLTE+G+W+ +KN II ++GSVQ I IPE ++ +YKT WEI Q T++ MA DRG +
Sbjct: 642 MTDLTELGLWNEEMKNMIIANNGSVQNIEVIPETIRNLYKTTWEISQKTVIKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W GLKTGMYYLR+R A++ I+FTVD S +
Sbjct: 702 IDQSQSLNIHIGEPNYGKITSMHFYGWKLGLKTGMYYLRTRPASNPIQFTVDKSKLAQST 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + E ++ +VCSL N++EC+ CGS
Sbjct: 762 K-----AEKEKQLEAMVCSLENKDECLMCGS 787
>gi|389624205|ref|XP_003709756.1| ribonucleoside-diphosphate reductase large subunit [Magnaporthe
oryzae 70-15]
gi|351649285|gb|EHA57144.1| ribonucleoside-diphosphate reductase large subunit [Magnaporthe
oryzae 70-15]
gi|440467397|gb|ELQ36621.1| ribonucleoside-diphosphate reductase large chain [Magnaporthe
oryzae Y34]
gi|440486678|gb|ELQ66519.1| ribonucleoside-diphosphate reductase large chain [Magnaporthe
oryzae P131]
Length = 909
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/777 (67%), Positives = 623/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL EH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDPEHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS + D++++ N ++G +P+IA D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVVSDLFHYVNPKNGKLSPMIAQDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YDCVMRHKEDLDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+I+ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DNIERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+ GK +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEQAGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP+F V+ H +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQF-------VDYHKGE-----------Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL EVT +V NLNKII+VNYYPV+ AR SN+RHRPIG+GVQGLAD F+ L + FES
Sbjct: 463 DFEKLHEVTQVVVRNLNKIIEVNYYPVQEARNSNMRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LNK IFETIY+ AL S ++A ++GPY TY SPVS+GILQ DMWNV PSD WDW
Sbjct: 523 PEARDLNKKIFETIYHAALTASCKLAEEQGPYSTYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKANIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+G+WS +KN+II + GS+Q I IPE+ K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVELGLWSDDMKNRIIAEGGSIQNIASIPEDTKKLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMRDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|213512716|ref|NP_001133985.1| Ribonucleoside-diphosphate reductase large subunit [Salmo salar]
gi|209156060|gb|ACI34262.1| Ribonucleoside-diphosphate reductase large subunit [Salmo salar]
gi|223648756|gb|ACN11136.1| Ribonucleoside-diphosphate reductase large subunit [Salmo salar]
Length = 792
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/811 (64%), Positives = 645/811 (79%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGREERVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N + +P++A +
Sbjct: 61 AEIAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVVEDLYNYVNPLNRCHSPMVAKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+++N L+S II+DRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV++GIH+
Sbjct: 121 LDIVLENKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+ I+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 TDIDAVIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL+LKKN GKEE RARDLFY +W+PDLFM+RV++N WSL CP++ GL
Sbjct: 301 LEPWHFDVFDFLDLKKNTGKEEQRARDLFYGMWIPDLFMKRVESNQDWSLMCPSDCPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFEKLYT YE+EG+ K+VV+AQ +W I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYTRYEQEGRVKRVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLASIAL +V + R F
Sbjct: 421 GTIKSSNLCTEIVEYTSHDEVAVCNLASIALNMYV-------------------TPERTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLA VT ++ NLNKII++NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFSKLAYVTKVIVRNLNKIIEINYYPVVEAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN IFETIYY AL++S E+AA+ G YETY SPVSKGILQ +MW+ P+D WDW
Sbjct: 522 AEAQKLNTQIFETIYYAALESSCELAAELGAYETYPGSPVSKGILQYNMWDKTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 TLLKENIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN++I +GS+Q I EIP++LK +YKTVWEI Q T++ MA DRG +
Sbjct: 642 LKDLTERGLWNEEMKNQLIGQNGSIQGIAEIPDDLKELYKTVWEISQKTILKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ AA+ I+FT++ KE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKESQ 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
L E A +VCSL NR++C+ CGS
Sbjct: 762 SAKNLEALKELNRAAMVCSLENRDDCLMCGS 792
>gi|348555237|ref|XP_003463430.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Cavia porcellus]
Length = 792
Score = 1120 bits (2897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q I EIP++LK +YKTVWEI Q T++ MA DRG +
Sbjct: 642 LKDLTERGLWNEKMKNQIIACNGSIQTILEIPDDLKQLYKTVWEISQKTVLKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|114635715|ref|XP_001160029.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 4 [Pan troglodytes]
gi|397465790|ref|XP_003804664.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Pan paniscus]
gi|410214658|gb|JAA04548.1| ribonucleotide reductase M1 [Pan troglodytes]
gi|410262940|gb|JAA19436.1| ribonucleotide reductase M1 [Pan troglodytes]
gi|410303308|gb|JAA30254.1| ribonucleotide reductase M1 [Pan troglodytes]
gi|410337287|gb|JAA37590.1| ribonucleotide reductase M1 [Pan troglodytes]
Length = 792
Score = 1120 bits (2897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|5006420|gb|AAD37491.1| ribonucleotide reductase M1 subunit [Homo sapiens]
Length = 792
Score = 1120 bits (2897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+K+DGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKQDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VL++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|388454038|ref|NP_001252816.1| ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
gi|355566819|gb|EHH23198.1| Ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
gi|355752416|gb|EHH56536.1| Ribonucleoside-diphosphate reductase large subunit [Macaca
fascicularis]
gi|380815414|gb|AFE79581.1| ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
gi|383420603|gb|AFH33515.1| ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
Length = 792
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKENIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KISKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|242014390|ref|XP_002427874.1| Ribonucleoside-diphosphate reductase large chain, putative
[Pediculus humanus corporis]
gi|212512343|gb|EEB15136.1| Ribonucleoside-diphosphate reductase large chain, putative
[Pediculus humanus corporis]
Length = 795
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/811 (64%), Positives = 644/811 (79%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR GR E VHFDKIT+R++KL YGL+ ++ DP+ ++ KV G+Y GVTT++LD LA
Sbjct: 4 MFVIKRGGRNEEVHFDKITSRIQKLCYGLNLDYVDPIAITVKVINGLYSGVTTAELDSLA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A+MTT HPDYA LAARIAVSNLHK TK SFS+ + D+YN N + P+++D
Sbjct: 64 AEVSASMTTQHPDYAILAARIAVSNLHKETKVSFSDVMTDLYNMKNSFNQQPTPMLSDYH 123
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II+K+A L++ IIY+RD++Y+YFGFKTLERSYLLK+ GKVVERPQHMLMRV++G+H
Sbjct: 124 YDIIIKHADELNAAIIYERDYNYNYFGFKTLERSYLLKINGKVVERPQHMLMRVAVGLHG 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI SAI+TY+++S+++FTHASPTLF+A T +PQLSSCFL+ MK+DSI+GIYETLK+CA+
Sbjct: 184 DDISSAIETYNLLSEKYFTHASPTLFSAATRKPQLSSCFLLTMKEDSIDGIYETLKQCAL 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IR+ G+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 244 ISKSAGGIGVNIHCIRSKGTYIAGTNGISNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 303
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LKKN GKEE RARDLFYALW+PDLFMERV+ N +W L CP GL+
Sbjct: 304 LEPWHADIFEFLDLKKNTGKEETRARDLFYALWIPDLFMERVEQNQEWCLMCPKTCPGLS 363
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EF KLY YE +G K V+AQ+LW+ I+ SQ+ETGTPYML+KD CNRKSNQQNL
Sbjct: 364 DCWGEEFNKLYLSYEEKGLYVKKVKAQSLWYAIIESQVETGTPYMLYKDACNRKSNQQNL 423
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNLASIA+ FV+ ++ +
Sbjct: 424 GTIKCSNLCTEIVEYSSPEEIAVCNLASIAVNMFVK-------------------PDKTY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL +VT I+T+NLNK+ID+ YYPV A+ SNLRHRPIGIG+QGLAD FIL+ + F+S
Sbjct: 465 NFEKLKDVTKIITKNLNKVIDITYYPVPEAKLSNLRHRPIGIGIQGLADAFILMRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ+LN IFETIYY AL+ SSE+AA GPYETY SP SKGILQ DMW V P++ WDW
Sbjct: 525 PEAQKLNIQIFETIYYGALEASSELAAIHGPYETYEGSPASKGILQYDMWGVTPTNLWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K G+RNSLL+APMPTAST+QILGNNE FEPYT+NIY+RRVLSGEF VVN+HL
Sbjct: 585 DALKNKIKKWGIRNSLLIAPMPTASTAQILGNNESFEPYTTNIYTRRVLSGEFQVVNQHL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+G+W+ +KN II + GS+Q I IP+ELK +YKTVWEI Q ++ MA DRG +
Sbjct: 645 LKDLTEIGLWNDEMKNTIIANGGSIQNIDSIPKELKALYKTVWEISQKVILKMAADRGAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ QPN+ K+TS+HF W GLKTGMYYLR++ AA I+FTVD +
Sbjct: 705 IDQSQSLNIHIAQPNYGKLTSMHFYAWKLGLKTGMYYLRTKPAAQPIQFTVDKTKVNNAN 764
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
K D+ M + CSL N+++C+ CGS
Sbjct: 765 VKEVSTEKDKFNMESISCSLQNKDDCLMCGS 795
>gi|367054108|ref|XP_003657432.1| hypothetical protein THITE_2123125 [Thielavia terrestris NRRL 8126]
gi|347004698|gb|AEO71096.1| hypothetical protein THITE_2123125 [Thielavia terrestris NRRL 8126]
Length = 912
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/777 (66%), Positives = 625/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++G +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNGRPSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ LDS I+YDRDF+Y YFGFKTLERSYLL++ GK+VERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDELDSAIVYDRDFNYQYFGFKTLERSYLLRLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+I+ ++TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DNIERVLETYNLMSNKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREG+ +K V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGRGRKTVRAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEIIEY++P E AVCNLAS+ALP FV + +
Sbjct: 421 GTIRGSNLCTEIIEYSAPDEVAVCNLASLALPAFVDYNE------------------GVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLN+IID+N+YPV+ A SN+RHRPIG+GVQGLADTF+ L M FES
Sbjct: 463 DFKKLHEVTQVVVRNLNRIIDINHYPVKEAYNSNMRHRPIGVGVQGLADTFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S ++A +EGPY TY SPVS+GILQ DMWNV PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCKLAQEEGPYSTYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKAQIKEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAAGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|342884077|gb|EGU84420.1| hypothetical protein FOXB_05085 [Fusarium oxysporum Fo5176]
Length = 897
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/777 (66%), Positives = 622/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++G +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNGRPSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ LDS I+YDRDF Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVS+GI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFQYQYFGFKTLERSYLLKIDGKIVERPQHMIMRVSVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ ++TY++MS ++FTHASPTLFNAGTP+PQLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DDIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+EGK +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEKEGKGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY +P E AVCNLAS+ALP F+ + +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPSFINYDEA------------------CY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +V+ +V NLNKIIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHKVSQVVIRNLNKIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S ++A +EGPY T+ SP S+GILQ DMWNV PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASVQLAKEEGPYSTFKGSPASEGILQFDMWNVKPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + +G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ETLREEVKTHGIRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II ++GS+Q IP IP ++K +YKTVWEI Q +V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADVKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQQALK 759
>gi|332211477|ref|XP_003254845.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Nomascus leucogenys]
Length = 792
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLRMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|344296860|ref|XP_003420120.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Loxodonta africana]
Length = 792
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A+
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVANST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE+ G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKRGRIRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRP+GIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEAFLSNKRHRPVGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S E+A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q I EIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIHEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+ECM CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECMMCGS 792
>gi|380488165|emb|CCF37565.1| ribonucleoside-diphosphate reductase large subunit [Colletotrichum
higginsianum]
Length = 895
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 622/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL EH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMEHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++G +P+IA D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNGKASPMIAKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRV++GI
Sbjct: 121 YDAVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+FL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFDFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+ GK +K ++AQ LW+ IL +Q ETG P+ML+KD NRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEQMGKGRKTMKAQKLWYAILEAQTETGNPFMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY +P E AVCNLAS+ALP FV + +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFVDYNE------------------GVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLN+IIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFQKLHEVTQVVVRNLNRIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LNK IFETIY+ AL S ++A +EGPY+TY SPVS+GILQ DMWNV PSD WDW
Sbjct: 523 PEARDLNKKIFETIYHAALTMSVQLAKEEGPYQTYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DSLKEQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II ++GS+Q IP IP E+K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPTEVKALYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|320593756|gb|EFX06165.1| ribonucleotide reductase large subunit [Grosmannia clavigera
kw1407]
Length = 913
Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/776 (66%), Positives = 621/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL TEH DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDTEHIDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S I D+YN+ N R+ +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQWSAVITDLYNYVNPRNNTLSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YDCVMRHKEDFDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++ ++TY+ MS ++FTHASPTLFNAGTP+ Q+SSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DNVERVVETYNYMSNKFFTHASPTLFNAGTPQAQMSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNGIVPMLRV+N+TARYVDQGG KR GAF +Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAFCIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG+W+L CPNE G+A
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGMA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREG+ +K V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGRGRKTVKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY++P E AVCNLAS+ALP FV N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPSFV------------------DYTNETY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV +V NLN +IDVNYYPV A+ SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHEVAQLVVRNLNHVIDVNYYPVPEAKNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S E+A EG Y TY SPVS+GILQPDMW+V PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCELAKIEGTYSTYEGSPVSQGILQPDMWDVKPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLRLKIKEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II + GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQQAL 758
>gi|341039005|gb|EGS23997.1| hypothetical protein CTHT_0007080 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 910
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/777 (67%), Positives = 622/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL H DPV ++QKV AGVY GVTT+QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVIAGVYPGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S I D+Y++ N ++G P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQWSAVIHDLYHYVNPKNGKPCPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKIDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+PQLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 DNVERVIETYNLMSMKFFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ N W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNQDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREG+ ++ V+AQ LW+ IL +Q+ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGRGRRTVKAQKLWYHILEAQVETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEIIEY +P E AVCNLAS+ALP F V+ + R +
Sbjct: 421 GTIRCSNLCTEIIEYCAPDEVAVCNLASLALPAF-------VDYNEGR-----------Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLN+IID+N+YPV AR+SNLRHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFQKLHEVTQVVVRNLNRIIDINHYPVPEARKSNLRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S +IA +EGPYETY SPVS+GILQ DMW V PS WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCDIAKEEGPYETYEGSPVSQGILQYDMWGVTPSPLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ESLKAKIKKYGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+G+WS +KN+II + GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVELGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQKTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|149634836|ref|XP_001505371.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Ornithorhynchus anatinus]
Length = 792
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 648/811 (79%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT +PDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPHNGKHSPMVAKTT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV++GIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHE 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNRDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KDTCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL FV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSRDEVAVCNLASLALNMFV-------------------TLEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPIPEASTSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LN+ IFETIYY AL S ++A GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNQQIFETIYYGALDASCDLAKDHGPYETYQGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KALKEKIAKYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIPE+LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ KEK
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NREEC+ CGS
Sbjct: 762 KATKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|358387135|gb|EHK24730.1| hypothetical protein TRIVIDRAFT_61504 [Trichoderma virens Gv29-8]
Length = 903
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/777 (66%), Positives = 623/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL T+H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDTDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++ +P+I+ D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNSRASPMISKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ ++TYH+MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DDIERVLETYHLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ N W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNLDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEKEGRGRKTIRAQKLWYSILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY +P E AVCNLAS+ALP +V + +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPAYVDYNE------------------GCY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLNKIIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHEVTKVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL+ S EIA EGPY+++ SP S+GILQ DMW+V PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALEASMEIAKVEGPYQSFKGSPASEGILQFDMWDVKPSDLWEW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DSLKEQIKEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + G+WS +KN+II ++GS+Q IP IPE++K +YKTVWEI Q +V MA DRG +
Sbjct: 643 LKDLVDTGLWSDAMKNRIIAENGSIQNIPNIPEDIKALYKTVWEISQRQIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|322704073|gb|EFY95672.1| ribonucleoside-diphosphate reductase large chain [Metarhizium
anisopliae ARSEF 23]
Length = 905
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/777 (66%), Positives = 624/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL TEH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++ +P+I+ D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNERASPMISKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+I+ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 181 DNIERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREGK ++ ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGKGRRTIRAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY++P E AVCNLAS+ALP FV + +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAFVDYDE------------------GRY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLNKIIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S E+A ++GPY T+ SP S+GILQ DMWNV PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTASMELAKEQGPYSTFKGSPASEGILQFDMWNVTPSDLWEW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DTLKQQIKEHGIRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II ++GS+Q IP IP ++K +YKTVWEI Q +V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P+ K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPSMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|310798516|gb|EFQ33409.1| ribonucleotide reductase [Glomerella graminicola M1.001]
Length = 894
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/777 (66%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++ +P+IA D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNNKPSPMIAKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRV++GI
Sbjct: 121 YDAVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+FL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFDFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+ GK +K ++AQ LW+ IL +Q ETG P+ML+KD NRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEQMGKGRKTIKAQKLWYAILEAQTETGNPFMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY +P E AVCNLAS+ALP FV + +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFVDYNE------------------GVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLN+IIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFQKLHEVTQVVVRNLNRIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LNK IFETIY+ AL S ++A +EGPYETY SPVS+GILQ DMWNV PSD WDW
Sbjct: 523 PEARDLNKKIFETIYHAALTMSVQLAREEGPYETYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKEQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II ++GS+Q IP IP E+K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPTEVKALYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|426245029|ref|XP_004016318.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit [Ovis
aries]
Length = 791
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/814 (66%), Positives = 650/814 (79%), Gaps = 26/814 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE+EG+ +KV++AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 SLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK- 779
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ KEK
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN----KEKL 757
Query: 780 --PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
EK + E A +VCSL NR+EC+ CGS
Sbjct: 758 KDKEKVSKEEEKERNTAAMVCSLENRDECLMCGS 791
>gi|62897131|dbj|BAD96506.1| ribonucleoside-diphosphate reductase M1 chain variant [Homo
sapiens]
Length = 792
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 648/811 (79%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKTNGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IF TIYY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFGTIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VL++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|348538826|ref|XP_003456891.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oreochromis niloticus]
Length = 793
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/814 (65%), Positives = 656/814 (80%), Gaps = 24/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+EAV FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRREAVSFDKITSRVQKLCYGLNSDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPLNKRHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++++N A L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDVVLENKARLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY+++S++WFTHASPTLFNAGT +PQ+SSCFL+ M DDSI+GIY+TLK+CA+
Sbjct: 181 GDIDAAIETYNLLSEKWFTHASPTLFNAGTNKPQMSSCFLLAMMDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++V IRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKSAGGIGLAVSCIRATGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+FEFL LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CP+E GL
Sbjct: 301 LEPWHFDVFEFLELKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPSECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFE+LYT YE+EG+AK+VV+AQ LW+ I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 ECWGEEFEELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLASIAL +V + + +
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPEKTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA VT ++ +NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLASVTKVIVKNLNKIIDINYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LN IFETIYY AL+ S E+AA+ GPYETY SPVSKGILQ +MWN P+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAELGPYETYPGSPVSKGILQYEMWNKTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VL++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN++I +GS+Q I +IP++LK +YKTVWEI Q T++ MA DRG Y
Sbjct: 642 LKDLTERGLWNEDMKNQLIAHNGSIQNIDDIPDDLKQLYKTVWEISQKTVLKMAADRGTY 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K++S+HF W GLKTGMYYLR++ AA+ I+FT++ KE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLSSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNKEKLKEAQ 761
Query: 781 EKPELVVDDETK---MAQVVCSLTNREECMACGS 811
V++ET+ A +VCSL N++EC+ CGS
Sbjct: 762 SAKS--VEEETRERNTAAMVCSLANKDECLMCGS 793
>gi|197100140|ref|NP_001126012.1| ribonucleoside-diphosphate reductase large subunit [Pongo abelii]
gi|75041664|sp|Q5R919.1|RIR1_PONAB RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|55730032|emb|CAH91741.1| hypothetical protein [Pongo abelii]
Length = 792
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/811 (65%), Positives = 649/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK KK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKEAKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK S+LCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSSLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|346979155|gb|EGY22607.1| ribonucleoside-diphosphate reductase large chain [Verticillium
dahliae VdLs.17]
Length = 903
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++ +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNNRPSPMIAPET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +MK+ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRVS+GI
Sbjct: 121 YEFVMKHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVSVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DNVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGITPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+ GK +K ++AQ LW+ +L +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEKAGKGRKTIKAQKLWYAVLEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY++P E AVCNLAS+ALP +V N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAYV------------------DYNNGVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT +V NLN+IIDVN+YPV AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHQVTQVVVRNLNRIIDVNHYPVIEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S ++A +EGPY TY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEAKELNKQIFETIYHAALTMSCKLAQEEGPYSTYEGSPVSQGILQYDMWNVKPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ADLKSQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS ++KN+II ++GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDSMKNRIIAENGSIQNIPNIPADIKSLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDKEALK 759
>gi|302418985|ref|XP_003007323.1| ribonucleoside-diphosphate reductase large chain [Verticillium
albo-atrum VaMs.102]
gi|261352974|gb|EEY15402.1| ribonucleoside-diphosphate reductase large chain [Verticillium
albo-atrum VaMs.102]
Length = 903
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++ +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNNRPSPMIAPET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +MK+ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRVS+GI
Sbjct: 121 YEFVMKHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVSVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DNVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGITPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+ GK +K ++AQ LW+ +L +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEKAGKGRKTIKAQKLWYAVLEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY++P E AVCNLAS+ALP +V N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAYV------------------DYNNGVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT +V NLN+IIDVN+YPV AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHQVTQVVVRNLNRIIDVNHYPVIEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S ++A +EGPY TY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEAKELNKQIFETIYHAALTMSCKLAQEEGPYSTYEGSPVSQGILQYDMWNVKPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ADLKSQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS ++KN+II ++GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDSMKNRIIAENGSIQNIPNIPADIKSLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDKEALK 759
>gi|73988079|ref|XP_534027.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Canis lupus familiaris]
Length = 792
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/811 (65%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHE 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVS+GILQ DMWNV P++ WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSRGILQYDMWNVTPTELWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q ++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKIVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NREEC+ CGS
Sbjct: 762 KATKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|291384376|ref|XP_002708776.1| PREDICTED: ribonucleoside-diphosphate reductase M1 chain
[Oryctolagus cuniculus]
Length = 792
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/811 (65%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+Y++ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYSYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTE++EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEVVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY PVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|392871374|gb|EAS33278.2| ribonucleoside-diphosphate reductase large chain [Coccidioides
immitis RS]
Length = 877
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/777 (67%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYINPKNNRPAPMISQKT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK++A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YEIVMKHSAELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 EDIEKAIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHSDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEYTSP E AVCNLAS+ALP +V PV RG +
Sbjct: 421 GTIRSSNLCTEIIEYTSPDEVAVCNLASLALPTYVD----PV----------RGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT ++ NLNKIID N+YPV AR+SN RHRPI +GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S +IA +GPYETY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDIAKVDGPYETYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKRDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II + GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAY 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|238491914|ref|XP_002377194.1| ribonucleotide reductase large subunit Rnr1, putative [Aspergillus
flavus NRRL3357]
gi|317146285|ref|XP_001821413.2| ribonucleoside-diphosphate reductase large chain [Aspergillus
oryzae RIB40]
gi|220697607|gb|EED53948.1| ribonucleotide reductase large subunit Rnr1, putative [Aspergillus
flavus NRRL3357]
gi|391869144|gb|EIT78349.1| ribonucleotide reductase, alpha subunit [Aspergillus oryzae 3.042]
Length = 854
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 624/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYINPKNKKPAPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRVS+GIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRIDGKVAERPQHLLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TYH+MSQ++FTHASPTLFNAGTP+PQL+SCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 NDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYERYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEYT+P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV ++ NLNKIID+NYYPV A+ SN+RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKNSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL SS++A G YE+Y SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 PEAKQLNTQIFETIYHGALTASSDLAKDFGTYESYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II + GSVQ IP IP ++K +YKTVWEI Q +++ MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAY 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEALK 759
>gi|149719333|ref|XP_001499936.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Equus caballus]
Length = 792
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/811 (65%), Positives = 650/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKPT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHS 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL FV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPIPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S +++ ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLSREDGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q I EIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIQEIPDDLKQLYKTVWEISQKTILKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|303316562|ref|XP_003068283.1| Ribonucleoside-diphosphate reductase large chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240107964|gb|EER26138.1| Ribonucleoside-diphosphate reductase large chain, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 877
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYINPKNNRPAPMISQKT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK++A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YEIVMKHSAELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 EDIEKAIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHSDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEYTSP E AVCNLAS+ALP +V PV RG +
Sbjct: 421 GTIRSSNLCTEIIEYTSPDEVAVCNLASLALPTYVD----PV----------RGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT ++ NLNKIID N+YPV AR+SN RHRPI +GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S +IA +GPYETY SPVS+G+LQ DMWNV P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDIAKVDGPYETYEGSPVSQGVLQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKRDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II + GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQSIPNIPADIKALYKTVWEISQRTIVQMAADRGAY 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|225683656|gb|EEH21940.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
brasiliensis Pb03]
Length = 797
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/813 (64%), Positives = 630/813 (77%), Gaps = 22/813 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y+++N ++G AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNGRPAPMISQST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV+IGIH
Sbjct: 121 YEIVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG+W+LFCPNEA GLA
Sbjct: 301 LEPWHMDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ KK ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY SP E AVCNLASIALP FV RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD--------------AVRGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +V NLN+IID NYYPVE A+RSN RHRPI GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ L S E+A +GPY +Y SPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHACLTASCELAKVDGPYSSYEGSPVSQGILQYDMWGVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GS+Q IP IP+++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 EKPELVVDDETKMAQVVCSLT----NREECMAC 809
V K A V S T N E C+ C
Sbjct: 763 TNVARVNGAMKKRAAVSASYTSSIENPESCLMC 795
>gi|296479831|tpg|DAA21946.1| TPA: ribonucleoside-diphosphate reductase M1 chain [Bos taurus]
Length = 791
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/814 (66%), Positives = 649/814 (79%), Gaps = 26/814 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE+EG+ +KV++AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLAEVT ++ NLNKIID+NYYPV A SN HRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKLHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK- 779
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ KEK
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN----KEKL 757
Query: 780 --PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
EK + E A +VCSL NR+EC+ CGS
Sbjct: 758 KDKEKVSKEEEKERNTAAMVCSLENRDECLMCGS 791
>gi|18859325|ref|NP_571530.1| ribonucleoside-diphosphate reductase large subunit [Danio rerio]
gi|3914656|sp|P79732.1|RIR1_DANRE RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit; AltName: Full=Ribonucleotide reductase protein
R1 class I
gi|1695829|gb|AAB37102.1| ribonucleotide reductase protein R1 class I [Danio rerio]
Length = 794
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/814 (65%), Positives = 644/814 (79%), Gaps = 23/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDG QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGGQEGVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA TT HPDYA LAARIAVSNLHK TKK FSE ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATSTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATG YI GTNG SNG+VPMLRV N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGRYIAGTNGNSNGLVPMLRVNNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIF+FL LKKN GKEE RARDLFYALW+PDLFM+RV+TNG WSL CPN+ GL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPNDCPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFEKLY YE+EG+AK+VV+AQ LW+ I+ SQ ETGTPYML+KD CNRKSN+QNL
Sbjct: 361 ECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNRQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL +V + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYV-------------------TSERTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA VT ++ +NLNKIID+NYYPV+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDINYYPVKEAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LN IFETIYY AL++S E+AA+ GPY+TY PVSKGILQ DMW P+D WDW
Sbjct: 522 TEAQLLNTQIFETIYYAALESSCELAAEYGPYQTYAGCPVSKGILQYDMWEKTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+ +GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF +VN HL
Sbjct: 582 AALKEKIANDGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYHRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IP IP++LK +YKTVWEI Q T++ MA DRG Y
Sbjct: 642 LKDLTERGLWNEEMKNQIIAQNGSIQTIPAIPDDLKELYKTVWEISQKTILKMAADRGAY 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ A+ I+FT++ KE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPGANPIQFTLNKEKLKET- 760
Query: 781 EKPELVVDDETK---MAQVVCSLTNREECMACGS 811
+K D+ETK A +VCSL NR EC+ CGS
Sbjct: 761 QKTTSSEDEETKERNKAAMVCSLENRHECLMCGS 794
>gi|444731474|gb|ELW71827.1| Ribonucleoside-diphosphate reductase large subunit [Tupaia
chinensis]
Length = 792
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/811 (65%), Positives = 648/811 (79%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTMVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKISGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+K +CNR +NQQNL
Sbjct: 361 EVWGEEFEKLYEKYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKASCNRTNNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPIPEAYLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L+D I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKDKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KTSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|302307390|ref|NP_984039.2| ADL057Wp [Ashbya gossypii ATCC 10895]
gi|299788978|gb|AAS51863.2| ADL057Wp [Ashbya gossypii ATCC 10895]
gi|374107252|gb|AEY96160.1| FADL057Wp [Ashbya gossypii FDAG1]
Length = 890
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/778 (64%), Positives = 638/778 (82%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVKFDKITARISRLCYGLDPKHVDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ + D+Y++ N ++GL +P+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSQVVSDLYHYTNPKNGLHSPMISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+M + L+S I+YDRDF Y+YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YEIVMAHKDELNSAIVYDRDFQYNYFGFKTLERSYLLRIDGKVAERPQHMVMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI AI+TY++MS R+FTHASPTLFNAGTP PQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 181 KDIKKAIETYNLMSMRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+F+F++++KNHGKEE RARDLF ALWVPDLFM RVQ NG W+LF P+EA GL+
Sbjct: 301 LEPWHSDVFDFIDIRKNHGKEEIRARDLFPALWVPDLFMRRVQENGDWTLFSPSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LY Y REG+ +K ++AQ LW+ IL +Q ETGTP++L+KD CNRKSNQ+NL
Sbjct: 361 DVWGEEFEELYERYVREGRGRKTIKAQKLWYAILEAQTETGTPFILYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP F+ E + K +++
Sbjct: 421 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFIAE--------------AADGKTQWY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+ +VT NLN++ID NYYPVETA+RSN+RHRPI +GVQGLAD F++L + F+S
Sbjct: 467 DFDKLHEIAKVVTRNLNRVIDRNYYPVETAKRSNMRHRPIALGVQGLADAFMILRIPFDS 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
P+A++LN IFET+Y+ A + S E+A +EGPYE++ SP S+GILQ DMWN PS WDW
Sbjct: 527 PQAKELNSQIFETLYHAACEASMELAIEEGPYESFKGSPASQGILQFDMWNHKPSGMWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLL+APMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 DALKAKIIEHGMRNSLLLAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K+ II D+GS+Q +P IP+ELK +YKTVWE+ Q T++DMA DRG +
Sbjct: 647 LRDLVDLGIWDDSMKSHIISDNGSIQGLPNIPQELKDLYKTVWELSQKTIIDMAADRGAF 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
+DQSQSLNIH+ P ++TS+HF W +GLKTGMYYLR++AA+ AI+FTVD +V ++
Sbjct: 707 VDQSQSLNIHIRAPTMGRLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTVDKAVAEQ 764
>gi|395814934|ref|XP_003780992.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Otolemur garnettii]
Length = 792
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/811 (65%), Positives = 649/811 (80%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHADIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGHVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTE++EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEVVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLNEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEKMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLTMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KLSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|403262126|ref|XP_003923446.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Saimiri boliviensis boliviensis]
Length = 792
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/811 (65%), Positives = 648/811 (79%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++ + +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQRRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKIKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KISKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|402894482|ref|XP_003910385.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Papio anubis]
Length = 792
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/811 (65%), Positives = 647/811 (79%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFK RSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKVXXRSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKENIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|408394054|gb|EKJ73310.1| hypothetical protein FPSE_06575 [Fusarium pseudograminearum CS3096]
Length = 895
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/777 (66%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y+ N ++ +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHWVNPKNDRASPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ LDS I+YDRDF+Y+YFGF+TL RSYLL++ GK+ ERPQHM+MRV++GI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYNYFGFRTLSRSYLLQIDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ ++TY++MS ++FTHASPTLFNAGTP+PQLSSCFLV MK+DSI+GIY+TLK CA+
Sbjct: 181 DDIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++ H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNAHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVERNGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREGK +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEREGKGRKSIKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY +P E AVCNLAS++LP F+ +D +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLSLPSFINYEDA------------------CY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLNKIIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL TS ++A +EGPY T+ SP S+GILQ DMWNV PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTTSVQLAKEEGPYSTFKGSPASEGILQFDMWNVKPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + +G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 EPLREDVKTHGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D+GS+Q IP IP E+K +YKTVWEI Q +V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIADNGSIQNIPNIPAEIKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQENLK 759
>gi|395217261|ref|ZP_10401556.1| ribonucleoside diphosphate reductase subunit alpha [Pontibacter sp.
BAB1700]
gi|394455058|gb|EJF09608.1| ribonucleoside diphosphate reductase subunit alpha [Pontibacter sp.
BAB1700]
Length = 763
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/782 (66%), Positives = 638/782 (81%), Gaps = 22/782 (2%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK 91
++ P+ V++KV G+Y GV+T +LD LAAETAA++TT HPDYA LAAR+A+S+LHK T
Sbjct: 2 DYVSPIEVAKKVIDGIYDGVSTIELDNLAAETAASLTTKHPDYAVLAARVAISSLHKVTS 61
Query: 92 KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTL 151
KSFS T+K +Y + + ++G A L+A D+YEII K+AA LDS IIYDRD++YDYFG+KTL
Sbjct: 62 KSFSNTMKRLYTYEDPKTGENASLLAKDVYEIIRKHAATLDSTIIYDRDYNYDYFGYKTL 121
Query: 152 ERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTP 211
ERSYLL++ GK+VERPQHMLMRV++GIHK+DI+SAI+TY++MS++WFTHA+PTLFNAGTP
Sbjct: 122 ERSYLLRLDGKIVERPQHMLMRVAVGIHKEDIESAIETYNLMSEKWFTHATPTLFNAGTP 181
Query: 212 RPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNG 271
+PQLSSCFL+ M+DDSI GIY+TLK+CA IS+SAGGIG+S+HN+RATGSYI+GTNGTSNG
Sbjct: 182 KPQLSSCFLLTMQDDSIPGIYDTLKQCAQISQSAGGIGLSIHNVRATGSYIKGTNGTSNG 241
Query: 272 IVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYA 331
I+PML+VFNDTARYVDQGGGKRKGAFA+YLEPWHADIFEFL+LKKNHGKEE+RARDLFYA
Sbjct: 242 IIPMLKVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLKKNHGKEENRARDLFYA 301
Query: 332 LWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWF 391
LW PDLFM+RV+ NG WSLFCPNEA GL D WG +FE+LY YEREG+A+K V+AQ+LWF
Sbjct: 302 LWTPDLFMKRVEQNGDWSLFCPNEAPGLGDSWGQDFERLYEKYEREGRARKTVKAQDLWF 361
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
+L SQIETGTPYML+KD N KSNQQNLGTIKSSNLCTEI+EYTS E AVCNLAS+AL
Sbjct: 362 AVLESQIETGTPYMLYKDAANSKSNQQNLGTIKSSNLCTEIMEYTSQDEVAVCNLASLAL 421
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
PR+++E+ ++ FD +KL +VT VT+NLNK+ID+NYYPV AR
Sbjct: 422 PRYIKEE----------------GGHKTFDHQKLFDVTYHVTKNLNKVIDINYYPVPEAR 465
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SN+RHRPIG+GVQGLADTFI L M FES EA+ LNKDIFETIY+ A+ S ++A K+G
Sbjct: 466 NSNMRHRPIGLGVQGLADTFIALRMPFESDEARGLNKDIFETIYFAAMTASKDLAKKDGA 525
Query: 572 YETYHNSPVSKGILQPDMWNVIP-SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQIL 630
YET+ SP+S+G Q DMW V P S RWDW LR + K+GVRNSLLVAPMPTAST+QIL
Sbjct: 526 YETFKGSPLSEGKFQFDMWGVTPDSGRWDWEELRQEVVKHGVRNSLLVAPMPTASTAQIL 585
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPE 690
GNNE FEPYTSNIY RRVLSGEF+VVNKHLL DL +G+W+ +KN II +GSVQ IP
Sbjct: 586 GNNESFEPYTSNIYVRRVLSGEFMVVNKHLLKDLISLGLWNDRMKNAIIAANGSVQDIPS 645
Query: 691 IPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRG 750
IP+ +K +YKTVWEI Q T++DM+ DRG YI QSQSLN+H+ NF K+TS+HF W +G
Sbjct: 646 IPQNIKDLYKTVWEISQRTVIDMSADRGAYICQSQSLNLHVMNVNFGKLTSMHFHAWKKG 705
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETK-MAQVVCSLTNREECMAC 809
LKTGMYYLR++AA DAIKFTV+ K+ E E V + + + + + CSL N + C AC
Sbjct: 706 LKTGMYYLRTKAAVDAIKFTVE----KQAAETLEPVYNSQDQNRSDMSCSLDNPDACEAC 761
Query: 810 GS 811
GS
Sbjct: 762 GS 763
>gi|296827688|ref|XP_002851208.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
otae CBS 113480]
gi|238838762|gb|EEQ28424.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
otae CBS 113480]
Length = 874
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 623/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++G AP+I++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
EI+MK+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRV++GIH
Sbjct: 121 REIVMKHAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D++ I++Y++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 EDVEKVIESYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG+W+LFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ + ++AQ LW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGEEFEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLASIALP FV RG +
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASIALPTFVD--------------AVRGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +V +NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVVVKNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN IFET+Y+ AL S E+A +GPY +Y SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEAKLLNIQIFETLYHAALTASCELAKADGPYSSYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKTEISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|296217186|ref|XP_002754895.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Callithrix jacchus]
Length = 792
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/811 (65%), Positives = 648/811 (79%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++ + +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQRRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A + GPYETY SPVS+GILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSRGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLRMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A ++CSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMMCSLENRDECLMCGS 792
>gi|258566183|ref|XP_002583836.1| ribonucleoside-diphosphate reductase large chain 1 [Uncinocarpus
reesii 1704]
gi|237907537|gb|EEP81938.1| ribonucleoside-diphosphate reductase large chain 1 [Uncinocarpus
reesii 1704]
Length = 884
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/777 (66%), Positives = 625/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNNRPAPMISQKT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK++ L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YEIVMKHSEELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ AI+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDIEKAIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+D+FEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 IEPWHSDVFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEYT+P E AVCNLAS+ALP +V PV RG +
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTYVD----PV----------RGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT ++ NLNKIID N+YPV AR+SN RHRPI +GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVLIRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ +L S ++A +GPYETY SPVS+GILQ DMWNV PSD WDW
Sbjct: 523 PEARQLNTQIFETIYHASLTASCDLAKIDGPYETYEGSPVSQGILQYDMWNVTPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKKEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II + GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|261197195|ref|XP_002625000.1| ribonucleotide reductase large subunit Rnr1 [Ajellomyces
dermatitidis SLH14081]
gi|239595630|gb|EEQ78211.1| ribonucleotide reductase large subunit Rnr1 [Ajellomyces
dermatitidis SLH14081]
gi|239606620|gb|EEQ83607.1| ribonucleotide reductase large subunit Rnr1 [Ajellomyces
dermatitidis ER-3]
Length = 886
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/777 (66%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQGT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVEKVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG+W+LFCPNEA GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE+EG+ KK ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY SP E AVCNLASIALP FV PV RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD----PV----------RGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI GVQGLAD F+ L + FES
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDGNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ +L S E+A +GPY TY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHASLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+Q IP IP+++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|327351615|gb|EGE80472.1| ribonucleoside-diphosphate reductase [Ajellomyces dermatitidis ATCC
18188]
Length = 886
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/777 (66%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQGT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVEKVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG+W+LFCPNEA GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE+EG+ KK ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY SP E AVCNLASIALP FV PV RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD----PV----------RGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI GVQGLAD F+ L + FES
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDGNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ +L S E+A +GPY TY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHASLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+Q IP IP+++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|164519000|ref|NP_001106767.1| ribonucleoside-diphosphate reductase large subunit [Bos taurus]
gi|158455067|gb|AAI09487.2| RRM1 protein [Bos taurus]
Length = 791
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/814 (66%), Positives = 648/814 (79%), Gaps = 26/814 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE+EG+ +KV++AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLAEVT ++ NLNKIID+NYYPV A SN HRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKLHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K GVRNSLL+APMPTAST QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKEKIAKYGVRNSLLIAPMPTASTVQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK- 779
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ KEK
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN----KEKL 757
Query: 780 --PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
EK + E A +VCSL NR+EC+ CGS
Sbjct: 758 KDKEKVSKEEEKERNTAAMVCSLENRDECLMCGS 791
>gi|430813498|emb|CCJ29155.1| unnamed protein product [Pneumocystis jirovecii]
Length = 848
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/781 (66%), Positives = 625/781 (80%), Gaps = 20/781 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++ KV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVAFDKITARVSRLCYGLDMEHVDAASITMKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N R+ +P+I+
Sbjct: 61 AETAAYMTTKHPDYAILAARIAVSNLHKQTKKVFSHVISDLYHYVNPRNNKPSPMISLKT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++A LDS IIYDRDF Y+YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YETVMRHANELDSAIIYDRDFTYNYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ AI+TY++MS ++ THASPTLFNAGTP PQLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DDVEKAIETYNLMSAKYMTHASPTLFNAGTPNPQLSSCFLVTMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHCIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIFEFL+L+KNHGKEE RARDLFY LW+PDLFM+RV+ N WSLFCPNEA GL
Sbjct: 301 IEPWHADIFEFLDLRKNHGKEEIRARDLFYGLWIPDLFMKRVEANQDWSLFCPNEAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+E +A ++V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGEEFEVLYEKYEQEKRATRIVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEIIEY+SP E AVCNLASIALP F+ + +
Sbjct: 421 GTIKCSNLCTEIIEYSSPDEVAVCNLASIALPTFIDKG--------------------IY 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT +V NLNKIIDVNYYPVE ARRSN RHRPIGIGVQGLAD F+ L M F+S
Sbjct: 461 DFQKLHDVTKVVARNLNKIIDVNYYPVEEARRSNKRHRPIGIGVQGLADAFLSLRMPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
P A++LN IFETIY+ AL+ S E+A +EGPYETY SP S+GILQ DMWNV+P+D WDW
Sbjct: 521 PHAKELNIKIFETIYHAALEASCELAQEEGPYETYEGSPASQGILQYDMWNVVPTDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 581 DSLKVNIARYGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ +KN+II ++GS+Q IP IP E+K +YKTVWE+ Q T++D A DRG +
Sbjct: 641 LKDLVDLGLWNDIMKNRIIANNGSIQNIPSIPAEIKALYKTVWELSQKTIIDYAADRGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ P+F K+T +HF W +GLKTGMYYLR++AA+ I+FTVD +E
Sbjct: 701 IDQSQSLNIHIRDPSFGKITGMHFWGWRKGLKTGMYYLRTQAASAPIQFTVDRKALEEVD 760
Query: 781 E 781
E
Sbjct: 761 E 761
>gi|326469969|gb|EGD93978.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
tonsurans CBS 112818]
gi|326484125|gb|EGE08135.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
equinum CBS 127.97]
Length = 875
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++G AP+I++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
EI+MK+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRV++GIH
Sbjct: 121 REIVMKHAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D++ I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 EDVEKVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ + ++AQ LW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGEEFEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLASIALP FV RG +
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASIALPTFVD--------------AVRGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN IFET+Y+ AL S E+A +GPY +Y SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEAKLLNTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DGLKAEISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|449548832|gb|EMD39798.1| hypothetical protein CERSUDRAFT_112065 [Ceriporiopsis subvermispora
B]
Length = 875
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/777 (65%), Positives = 625/777 (80%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KR R+E V FDKITAR+ KL YGL EH DP+ V+QKV AGVY GVTT++LD LAA
Sbjct: 3 YVFKRGTRKERVQFDKITARISKLCYGLDKEHVDPIGVAQKVIAGVYNGVTTAELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIAVSNLHK TKK+FS + D+Y + N ++G A +I+ D+Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAVSNLHKETKKNFSAVVHDLYTYVNPKNGRAAGMISKDVY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+I+M+NA LDS IIYDRDF+Y+YFGFKTLERSYLLK+ G+ ERPQHMLMRV++GIH
Sbjct: 123 DIVMENAEQLDSAIIYDRDFNYNYFGFKTLERSYLLKINGRTAERPQHMLMRVAVGIHGK 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
D+ A++TY++MS+R+FTHASPTLFNAGTP QLSSCFLVCMKDDSIEGIY+TLK CA+I
Sbjct: 183 DLGRALETYNLMSERFFTHASPTLFNAGTPHAQLSSCFLVCMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEF++L+KNHGKEE RARDLFYALW+PDLFM+RV+ GQWSLFCPNEA GL +
Sbjct: 303 EPWHADVFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEAGGQWSLFCPNEAPGLHE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EFE+LY YEREG+A+K ++AQ LW+ I+ +QIETG P+ML+KD N KSNQQNLG
Sbjct: 363 VWGEEFERLYEQYEREGRARKTIEAQKLWYAIMEAQIETGGPFMLYKDAANAKSNQQNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY++P ETAVCNLASIALP F+ +N ++
Sbjct: 423 TIKSSNLCTEIIEYSAPDETAVCNLASIALPSFI--------------------ENGEYN 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F++L EV +V NLN+IIDVNYYP+ ARRSN+RHRPIG+GVQGLAD F+ L M F+SP
Sbjct: 463 FQRLHEVAKVVAFNLNRIIDVNYYPIPEARRSNMRHRPIGVGVQGLADAFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA+ LNK IFETIY+ A++ SS++A K+GPYETY SP SKG LQ D+W V P+D WDW
Sbjct: 523 EARLLNKQIFETIYHAAVEASSDMAEKDGPYETYEGSPASKGELQYDLWGVTPTDLWDWT 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ +++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKAKVARTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L + +W+ +KN II GSVQKIPEIP+++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 643 RELVDRRLWNDDMKNMIIAHGGSVQKIPEIPDDIKAIYKTVWEISQKKVIDLAADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD S K+
Sbjct: 703 CQSQSLNVHLQSPTSGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSYLKD 759
>gi|378729263|gb|EHY55722.1| ribonucleoside-diphosphate reductase large chain [Exophiala
dermatitidis NIH/UT8656]
Length = 918
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++G +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVISDLYHYVNPKNGKPSPMISTET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ L+S I+YDRDF+Y YFGFKTLERSYLLK+ +V ERPQHMLMRV++GIH
Sbjct: 121 YECVMRHQDELNSAIVYDRDFNYQYFGFKTLERSYLLKIGKQVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ AI+TY++MSQ+ FTHASPTLFNAGTP+PQLSSCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVEKAIETYNLMSQKCFTHASPTLFNAGTPQPQLSSCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHCIRATGSYIAGTNGTSNGLIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FE+LNL+KNHGKEE RARDLFYALW PDLFM+RV+ N W+LFCP+EA GLA
Sbjct: 301 LEPWHADVFEWLNLRKNHGKEEVRARDLFYALWTPDLFMKRVEKNQDWTLFCPHEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ ++ ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGRQTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLAS+ALP FV + +RG +
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPTFVDQ--------------ARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF +L EV +VT NLNKIID+NYYPV A+ SN+RHRPIG+GVQGLAD F+ L + F+S
Sbjct: 463 DFGRLHEVVQVVTRNLNKIIDINYYPVPEAKNSNMRHRPIGLGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S E+A ++GPY TY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCELAKEQGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKAEIAKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II + GS+Q IP IP ++K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTVLQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|212528622|ref|XP_002144468.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
marneffei ATCC 18224]
gi|210073866|gb|EEA27953.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
marneffei ATCC 18224]
Length = 872
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 622/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I+D+Y++ N ++ AP+I+ ++
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQFSAVIEDLYHYVNPKNNKAAPMISGEM 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YETVMKHAEELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++I+ AI+TY++MSQ++FTHASPTLFNAGTPRPQL+SCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 ENIEKAIETYNLMSQKYFTHASPTLFNAGTPRPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRATGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLNVHRIRATGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL+L+KNHGKEE RARDLFYALW PDLFM RV+ N W+LFCPNEASGLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMRRVEANQDWTLFCPNEASGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YEREG+ ++ V+AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEREGRGRRTVKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY +P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFVDT--------------ARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIAVGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S E+A + G YETY SPVS+GILQ DMW P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHGALTASIELAKEHGTYETYEGSPVSQGILQYDMWERTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ IS++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKAQISQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GSVQ IP IP ++K +YKTVWEI Q +++ MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAY 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|121706584|ref|XP_001271554.1| ribonucleotide reductase large subunit RNR1, putative [Aspergillus
clavatus NRRL 1]
gi|119399702|gb|EAW10128.1| ribonucleotide reductase large subunit RNR1, putative [Aspergillus
clavatus NRRL 1]
Length = 859
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/777 (66%), Positives = 624/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNNPAPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK+A L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH+LMRV++GIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNYFGFKTLERSYLLRISGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TYH+MSQ++FTHASPTLFNAGTP+PQL+SCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 NDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE+EG+ + ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYERYEKEGRGRSTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV ++ NLNKIID+NYYPV A++SN+RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S E+A + GPYETY SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 PEARQLNTQIFETIYHGALTASCELAKQLGPYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKAKIAQSGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GSVQ IP IP ++K +YKTVWEI Q ++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRNILQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|427794775|gb|JAA62839.1| Putative ribonucleotide reductase alpha subunit, partial
[Rhipicephalus pulchellus]
Length = 802
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/811 (65%), Positives = 650/811 (80%), Gaps = 33/811 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRD R+E VHFDKIT+R+ KL YGL+ + DP V+QKV G+Y GVTT +LD LA
Sbjct: 25 MFVLKRDSRKEPVHFDKITSRIHKLCYGLNMDFVDPCSVAQKVINGLYPGVTTVELDNLA 84
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FSE ++D+YN NER+ L++P+I+D +
Sbjct: 85 AETAATMTTKHPDYAILAARIAVSNLHKETKKVFSEVVEDLYNMVNERTRLRSPMISDSV 144
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M NA +S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+IGIH
Sbjct: 145 YKIVMDNAEVFNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVAIGIHG 204
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++A+ TY++MS++WFTHASPTLFN+GTPRPQLSSCFL+ MK+DSIEGIY+TLK+CA+
Sbjct: 205 TDVEAALNTYNLMSEKWFTHASPTLFNSGTPRPQLSSCFLLQMKEDSIEGIYDTLKQCAL 264
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+VH IRA+G+YI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 265 ISKSAGGIGVNVHCIRASGTYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 324
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL LKKN GKEE RARDLFYALW+PDLFM+RV+ +G WSL CP+E GL
Sbjct: 325 LEPWHADIFEFLELKKNTGKEETRARDLFYALWIPDLFMKRVEEDGVWSLMCPHECPGLH 384
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ EFEKLY YE + + ++ V+AQ LW IL SQIETGTPYML+KD CNRKSNQ+NL
Sbjct: 385 EVHSEEFEKLYVQYETDKRYRRQVRAQQLWSAILESQIETGTPYMLYKDACNRKSNQKNL 444
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTE++EYTSP E AVCNLASIAL RFV++ GS F
Sbjct: 445 GTIKCSNLCTEVVEYTSPDEVAVCNLASIALNRFVKD-------------GS-------F 484
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV+ ++T NLN+IIDVN+YP+ A RSN RHRPIGIGVQGLAD FILL + F+S
Sbjct: 485 DFQKLREVSQVITRNLNRIIDVNFYPIPEAERSNKRHRPIGIGVQGLADCFILLRLPFDS 544
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A LN+ IFETIYY AL+ S E+A K+GPYETY SPVS+GILQ DMW V P+D WDW
Sbjct: 545 EQAMLLNRQIFETIYYGALEASCELAQKDGPYETYKGSPVSEGILQYDMWGVTPTDLWDW 604
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF VVN+HL
Sbjct: 605 AALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQVVNQHL 664
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT+ G+W+ ++KN +I ++GSVQ + +IPE+LK +Y+TVWEI Q ++ MA DRG Y
Sbjct: 665 LKDLTDRGLWNESLKNDLIANNGSVQNL-DIPEDLKALYRTVWEIPQKNVLRMAADRGAY 723
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLN+H+ QPN+ K+TS+HF W GLKTGMYYLR++ AA+AI+FTVD + K+K
Sbjct: 724 IDQSQSLNVHIAQPNYAKLTSMHFYGWKLGLKTGMYYLRTKPAANAIQFTVDKTALKKK- 782
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
++ + CSL N++EC+ C +
Sbjct: 783 -----------QLDGIACSLKNKDECLMCSA 802
>gi|226293011|gb|EEH48431.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
brasiliensis Pb18]
Length = 881
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/777 (66%), Positives = 619/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y+++N ++G AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNGRPAPMISQST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV+IGIH
Sbjct: 121 YEIVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG+W+LFCPNEA GLA
Sbjct: 301 LEPWHMDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ KK ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY SP E AVCNLASIALP FV RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD--------------AVRGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +V NLN+IID NYYPVE A+RSN RHRPI GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ L S E+A +GPY +Y SPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHACLTASCELAKVDGPYSSYEGSPVSQGILQYDMWGVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GS+Q IP IP+++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|225560468|gb|EEH08749.1| ribonucleoside-diphosphate reductase subunit large [Ajellomyces
capsulatus G186AR]
Length = 881
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA+LAARIAVSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYATLAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQTT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ N +W+LFCPNEA GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEQNSEWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ KK V+AQ LW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY SP E AVCNLASIALP FV P+ RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD----PI----------RGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ L S E+A +GPY TY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHAGLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II + GS+Q IP IP+++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|410915398|ref|XP_003971174.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Takifugu rubripes]
Length = 792
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/811 (65%), Positives = 644/811 (79%), Gaps = 19/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQEAV FDKIT R++KL YGL++E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQEAVSFDKITFRVQKLCYGLNSEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT +PDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPLNKQHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+++N L+S IIYDRDF Y++FGFKTLERSYLLK GKV ERPQHMLMRV++GIH+
Sbjct: 121 LDIVLENKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKTNGKVAERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++AI+TY+++S++WFTHASPTLFNAGT +PQLSSCFL+ M++DSIEGIY+TL +CA+
Sbjct: 181 ADIEAAIETYNLLSEKWFTHASPTLFNAGTRKPQLSSCFLLAMREDSIEGIYDTLTQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SKSAGGIG++V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 VSKSAGGIGLAVSCIRATGSYIAGTNGRSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+F FL LKKN GKEE RARDLF+ALW+PDLFM+RV++N WSL CP+E GL
Sbjct: 301 LEPWHSDVFAFLELKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPSECPGLI 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE+LYT YE+EG+AK+VV+AQ LW+ I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 DCWGEEFEELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLASIAL +V + R +
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPQRTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLA VT I+ NLNKIID+NYYPV ARRSN+RHRPIGIGVQGLAD FIL+ +ES
Sbjct: 462 DFNKLASVTKIIVRNLNKIIDINYYPVPEARRSNMRHRPIGIGVQGLADAFILMRHPYES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LN IFETIYY AL+ S E+AA+ GPYETY SPVSKG+LQ DMW P+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAEFGPYETYAGSPVSKGVLQYDMWGKTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+WS +KN++I +GS+Q I EIP++LK +YKTVWEI Q T++ MA DRG Y
Sbjct: 642 LKDLTERGLWSDAMKNQLIAHNGSIQDIQEIPDDLKQLYKTVWEISQKTVLKMAADRGAY 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +P + K+TS+HF W GLKTGMYYLR++ AA+ I+FT++ KE
Sbjct: 702 IDQSQSLNIHIAEPTYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNREKLKEAQ 761
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
E MA +VCSL N++ECM GS
Sbjct: 762 SAKSKEEAKERNMAAMVCSLANKDECMMYGS 792
>gi|171690020|ref|XP_001909942.1| hypothetical protein [Podospora anserina S mat+]
gi|170944965|emb|CAP71076.1| unnamed protein product [Podospora anserina S mat+]
Length = 901
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/766 (67%), Positives = 615/766 (80%), Gaps = 18/766 (2%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT+QLD+LAAETAA
Sbjct: 1 DGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTAQLDDLAAETAAY 60
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++G +P+IA + YE +M+
Sbjct: 61 MTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNGRPSPMIAKETYECVMR 120
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
+ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI DDI+
Sbjct: 121 HKDDLDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWGDDIERV 180
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSI+GIY+TLK CA+ISK AG
Sbjct: 181 IETYTYMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIDGIYDTLKTCAMISKMAG 240
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 241 GIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 300
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
D+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG+W+L CPNE GLADC+G E
Sbjct: 301 DVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLADCYGEE 360
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FE LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQQNLG I+SS
Sbjct: 361 FEALYEKYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQQNLGVIRSS 420
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEI+EY++P E AVCNLAS+ALP+FV + FDF+KL
Sbjct: 421 NLCTEIVEYSAPDEVAVCNLASLALPQFVDYNEAK------------------FDFKKLH 462
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
EVT IV NLNKIIDVN+YPV+ A SN+RHRPIG+GVQGLAD F+ L M FES EA++L
Sbjct: 463 EVTQIVVRNLNKIIDVNHYPVKEAYNSNMRHRPIGLGVQGLADAFLALRMPFESAEAREL 522
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
NK IFETIY+ AL S ++A ++G Y TY SPVSKGILQ DMWNV PSD WDW L+
Sbjct: 523 NKQIFETIYHAALTMSCQLAKEQGTYSTYEGSPVSKGILQYDMWNVKPSDLWDWDELKAE 582
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN LL DL +
Sbjct: 583 IKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWLLKDLVD 642
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
MG+WS +KN+II + GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +IDQSQS
Sbjct: 643 MGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 702
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
LNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD
Sbjct: 703 LNIHMRDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVD 748
>gi|240280028|gb|EER43532.1| ribonucleoside-diphosphate reductase subunit large [Ajellomyces
capsulatus H143]
gi|325088748|gb|EGC42058.1| ribonucleoside-diphosphate reductase subunit large [Ajellomyces
capsulatus H88]
Length = 881
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA+LAARIAVSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYATLAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQTT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ N +W+LFCPNEA GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNSEWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ KK V+AQ LW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY SP E AVCNLASIALP FV P+ RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD----PI----------RGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ L S E+A +GPY TY SPVS+GILQ DMWNV P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHAGLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II + GS+Q IP IP+++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|116200095|ref|XP_001225859.1| ribonucleoside-diphosphate reductase large chain [Chaetomium
globosum CBS 148.51]
gi|88179482|gb|EAQ86950.1| ribonucleoside-diphosphate reductase large chain [Chaetomium
globosum CBS 148.51]
Length = 912
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/777 (65%), Positives = 622/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDVDHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++ +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNERASPMIAKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY++LK CA+
Sbjct: 181 DNVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDSLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+ G+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEKAGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP+FV +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFV------------------DYNQGVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV +V NLNKIIDVN+YPV+ A SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFQKLHEVAQVVVRNLNKIIDVNHYPVQEAYNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S ++A ++G Y TY SPVS+GILQ DMWNV P+ WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCDLAKEQGTYSTYEGSPVSQGILQYDMWNVTPTGLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKAKIKEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPTDIKALYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P+ K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMREPSMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|363751963|ref|XP_003646198.1| hypothetical protein Ecym_4318 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889833|gb|AET39381.1| hypothetical protein Ecym_4318 [Eremothecium cymbalariae
DBVPG#7215]
Length = 877
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/778 (64%), Positives = 638/778 (82%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEQVKFDKITARISRLCYGLDPKHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I D+Y++ N ++GLK+P+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSQVISDLYHYINPKNGLKSPMISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+M++ L+S I+YDRDF Y+YFGFKTLERSYLL++ G+V ERPQHM+MRV++GIH
Sbjct: 121 YEIVMEHKDELNSAILYDRDFQYNYFGFKTLERSYLLRIDGQVAERPQHMVMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI AI+TY++MS R+FTHASPTLFNAGTP PQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 181 RDIKKAIETYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+F++++KNHGKEE RARDLF ALW+PDLFM RVQ NG W+LF P+EA GL+
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMRRVQDNGDWTLFSPSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LY Y EG+ +K ++AQ LW+ IL +Q ETGTP++L+KD CNRKSNQ+N+
Sbjct: 361 EVWGDEFEELYERYVLEGRGRKTIKAQKLWYAILEAQTETGTPFILYKDACNRKSNQKNI 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP F+ E S K +F+
Sbjct: 421 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFIEE--------------SSDGKTQFY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL ++ +VT NLN++ID NYYPVETARRSN+RHRPI +GVQGLAD F++L + F+S
Sbjct: 467 NFQKLHDIAKVVTRNLNRVIDRNYYPVETARRSNMRHRPIALGVQGLADAFMILRIPFDS 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFET+Y+ A + S E+A +EGPYE++ SP+SKGILQ DMW P+D WDW
Sbjct: 527 KEAKELNIQIFETLYHAACEASVELAIEEGPYESFKGSPISKGILQFDMWGRKPTDLWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G RNSLL+APMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 QTLKAKIVKHGTRNSLLIAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W ++K+ II D+GS+Q +P IP+ELK +YKTVWE+ Q T++DMA DRG Y
Sbjct: 647 LRDLVDLGVWDESMKSHIISDNGSIQGLPNIPQELKDLYKTVWELSQKTIIDMAADRGAY 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
IDQSQSLNIH+ P ++TS+HF W +GLKTGMYYLR++AA+ AI+FTVD +V ++
Sbjct: 707 IDQSQSLNIHIRAPTMGRLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTVDKAVAEQ 764
>gi|429853065|gb|ELA28164.1| ribonucleoside-diphosphate reductase large chain [Colletotrichum
gloeosporioides Nara gc5]
Length = 898
Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/777 (66%), Positives = 619/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++G +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNGRLSPMIAKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRV++GI
Sbjct: 121 YDCVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MS + FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSSKCFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNG+ PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVTPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREGK +K ++AQ LW+ IL +Q ETG P+ML+KD NRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGKGRKTMKAQKLWYAILEAQTETGNPFMLYKDHANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP FV D +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPSFVNYSD------------------GIY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT +V NLN+IIDVN+YPV AR SN+RHRPIG+GVQGLAD F+ L + FES
Sbjct: 463 DFQKLHDVTQVVVRNLNRIIDVNHYPVPEARNSNMRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S ++A +EG Y +Y SPVS+G+LQ DMW V PSD WDW
Sbjct: 523 PEARELNKKIFETIYHAALTMSVQLAKEEGTYSSYEGSPVSQGVLQYDMWGVKPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DSLKEQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II ++GSVQ IP IP E+K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSVQNIPNIPAEVKALYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|119501198|ref|XP_001267356.1| ribonucleotide reductase large subunit RNR1, putative [Neosartorya
fischeri NRRL 181]
gi|119415521|gb|EAW25459.1| ribonucleotide reductase large subunit RNR1, putative [Neosartorya
fischeri NRRL 181]
Length = 859
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNKQPAPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRV++GIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++I+ AI+TYH+MSQ++FTHASPTLFNAGTP+PQL+SCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 NNIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVESNGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV ++ NLNKIIDVNYYPV A++SN+RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDVNYYPVPEAKKSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+QLN IFETIY+ AL S E+A + GPYETY SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 AEARQLNIQIFETIYHGALTASCELAKEFGPYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKTKIAQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GSVQ IP IP ++K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|395330811|gb|EJF63193.1| ribonucleotide reductase alpha subunit [Dichomitus squalens
LYAD-421 SS1]
Length = 894
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/783 (65%), Positives = 628/783 (80%), Gaps = 20/783 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KR R+E V FDKITAR+ KL YGL +H DP+ V+QKV AGVY GVTT +LD LAA
Sbjct: 3 YVFKRGRRKERVQFDKITARIAKLCYGLDKDHVDPIGVAQKVIAGVYAGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIAVSNLHK TKK+FS I D+Y++ N ++G A LI+ +IY
Sbjct: 63 ETAAYLTTKHPDYAILAARIAVSNLHKETKKNFSAVISDLYHYVNPKNGKPAGLISKEIY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
E++ NA LDS IIYDRDF+Y++FGFKTLERSYLLK+ G+V ERPQH+LMRV++GIH
Sbjct: 123 EVVQANAEVLDSAIIYDRDFNYNFFGFKTLERSYLLKLNGRVAERPQHLLMRVAVGIHGA 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI+ A++TY++MS+R+FTHASPTLFNAGTP PQ+SSCFLVCMKDDSIEGIY TLK+CA+I
Sbjct: 183 DIERALQTYNLMSERYFTHASPTLFNAGTPNPQMSSCFLVCMKDDSIEGIYSTLKDCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLRV++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRVYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV++ G+WSLFCP+EA GL +
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVESGGKWSLFCPSEAPGLHE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EFE LY YEREG+A+K + AQ LW+ IL SQIETG P+ML+KD NRKSNQQNLG
Sbjct: 363 VWGEEFEALYEQYEREGRARKTIDAQKLWYAILESQIETGGPFMLYKDAANRKSNQQNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY++P ETAVCNLASIALP F+ +N ++
Sbjct: 423 TIKSSNLCTEIIEYSAPDETAVCNLASIALPSFI--------------------ENGKYN 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL +V +V NLN+IIDVNYYP+ ARRSN+RHRPIGIGVQGLAD F+ L M F+S
Sbjct: 463 FQKLHDVAKVVAFNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADAFMALRMPFDSV 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA+ LN I ETIY+ A++ S E+A K+GPYETY SP S+G LQ D+W V P+D WDW
Sbjct: 523 EARLLNLQIAETIYHAAVEASCEMAQKDGPYETYQGSPASQGKLQYDLWGVTPTDLWDWA 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ ++++G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKAKVAQHGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L E+G+W+ +KN II ++GSVQ I IPE++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 643 RELVELGLWNDDMKNMIIANNGSVQNIDIIPEDVKAIYKTVWEISQKKVLDLAADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AIKFTVD+S K +
Sbjct: 703 CQSQSLNVHLQSPTNGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIKFTVDSSYLKNAAK 762
Query: 782 KPE 784
K +
Sbjct: 763 KTQ 765
>gi|70994760|ref|XP_752157.1| ribonucleotide reductase large subunit Rnr1 [Aspergillus fumigatus
Af293]
gi|66849791|gb|EAL90119.1| ribonucleotide reductase large subunit Rnr1, putative [Aspergillus
fumigatus Af293]
gi|159124928|gb|EDP50045.1| ribonucleotide reductase large subunit RNR1, putative [Aspergillus
fumigatus A1163]
Length = 859
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNKQPAPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRV++GIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++I+ AI+TYH+MSQ++FTHASPTLFNAGTP+PQL+SCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 NNIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVESNGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYERYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV ++ NLNKIIDVNYYPV A++SN+RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDVNYYPVPEAKKSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+QLN IFETIY+ AL S E+A + GPYETY SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 AEARQLNIQIFETIYHGALTASCELAKEFGPYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKAKIAQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GSVQ IP IP ++K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|345563310|gb|EGX46313.1| hypothetical protein AOL_s00110g137 [Arthrobotrys oligospora ATCC
24927]
Length = 917
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/778 (66%), Positives = 630/778 (80%), Gaps = 19/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL EH D ++QKV AGVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKERVQFDKITARVSRLCYGLDAEHVDAATITQKVIAGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS+ + D+Y++ N R+ +P+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSQVVSDLYHYVNPRNKRPSPMISKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++A L+S I+YD+DF+Y+YFGFKTLERSYLL++ GKV ERPQHM+MRVS+GIH
Sbjct: 121 YETVMRHADELNSAIVYDKDFNYNYFGFKTLERSYLLRLDGKVAERPQHMIMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++I+ AI+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 ENIEKAIETYNLMSSKYFTHASPTLFNAGTPQAQLSSCFLVAMKDDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ VHNIRATGSYI GTNGTSNG++PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHVHNIRATGSYIAGTNGTSNGLIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+FL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ N WSLFCPNEA+GLA
Sbjct: 301 LEPWHADVFDFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANLDWSLFCPNEATGLA 360
Query: 361 DCWGAEFEKLYTHYER-EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
DC+G EFE LY YE+ E A+K ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+N
Sbjct: 361 DCYGEEFEALYEKYEKTENLARKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKN 420
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LG IKSSNLCTEI+EY+SP E AVCNLASIALP FV DV +N
Sbjct: 421 LGIIKSSNLCTEIVEYSSPDEVAVCNLASIALPTFV---DV--------------VRNE- 462
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
+DF+KL EVT ++T NLNKIIDVNYYPVE A+RSN RHRPI +GVQGLAD F+ L M FE
Sbjct: 463 YDFQKLHEVTKVITRNLNKIIDVNYYPVEEAKRSNFRHRPIAVGVQGLADAFLALRMPFE 522
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
SPEA+ LNK IFETIY+ A + S+E+AA++GPYE+Y SP S+G LQ DMWNV P+D WD
Sbjct: 523 SPEARHLNKQIFETIYHGAAEASAELAAEQGPYESYEGSPASQGQLQYDMWNVTPTDLWD 582
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN
Sbjct: 583 WDELKAKIAKHGMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPW 642
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL +MG+WS +KN+II D GS+Q +P IP ++K +YKTVWEI Q ++D+A DR
Sbjct: 643 LLRDLVDMGLWSDNMKNRIIADGGSIQNVPNIPADIKSLYKTVWEISQKVVIDLAADRSA 702
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
+IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR+ AA+ AI+FTVD K
Sbjct: 703 FIDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTMAASAAIQFTVDQEALK 760
>gi|390603430|gb|EIN12822.1| ribonucleotide reductase alpha subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 887
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/775 (66%), Positives = 624/775 (80%), Gaps = 20/775 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KR R+E V FDKITAR+ KL YGL TEH D V V+QKV AGVY GVTT +LD LA+
Sbjct: 3 YVFKRGERKERVQFDKITARIAKLCYGLDTEHVDAVEVAQKVIAGVYPGVTTVELDNLAS 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA+LAARIAVSNLHK TKKSFS I+D+Y + N ++G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYATLAARIAVSNLHKETKKSFSSVIRDLYTYVNPKNGRPAGMISKETY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+++M NA LDS IIYDRDF+Y++FGFKTLERSYLL++ G+V ERPQHM+MRV++GIH +
Sbjct: 123 DVVMANADTLDSAIIYDRDFNYNFFGFKTLERSYLLRINGRVAERPQHMIMRVAVGIHGN 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID A++TY++MS+R FTHASPTLFNAGTP PQLSSCFLV MKDDSIEGIY+TLK CA+I
Sbjct: 183 DIDRALETYNLMSERCFTHASPTLFNAGTPHPQLSSCFLVAMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+ +HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLHIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEF++L+KNHGKEE RARDLFYALWVPDLFM+RV+ NG+WSLFCPNEA GL +
Sbjct: 303 EPWHADVFEFIDLRKNHGKEEVRARDLFYALWVPDLFMKRVEANGEWSLFCPNEAPGLHE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EF+KLY YE+EG+A+K + AQ LW+ I+ +QIETG P+ML+KD N KSNQQNLG
Sbjct: 363 VWGEEFDKLYEKYEKEGRARKTIPAQKLWYAIMEAQIETGGPFMLYKDAANSKSNQQNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEI+EY+SP ETAVCNLASIALP FV KN +D
Sbjct: 423 TIKSSNLCTEIMEYSSPDETAVCNLASIALPTFV--------------------KNGVYD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F++L V +VT NLN+IIDVNYYPV ARRSN+RHRPIG+GVQGLADTF++L M F+SP
Sbjct: 463 FKRLHAVAKVVTFNLNRIIDVNYYPVPEARRSNIRHRPIGVGVQGLADTFMILRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA++LN IFETIY+ AL+ S EIAA +GPYET+ SP S+G LQ D+W V PS WDW
Sbjct: 523 EAKELNIQIFETIYHAALEASCEIAAVDGPYETFQGSPASQGQLQFDLWGVTPSGLWDWQ 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+D I + G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKDKIMQTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L ++ +W+ +KN II ++GS+Q I IP+++K IYKTVWEI Q ++DMA DRG +I
Sbjct: 643 RELVDLKLWNDQMKNMIIANNGSIQSIAGIPDDIKAIYKTVWEISQKKVLDMAADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD +V
Sbjct: 703 CQSQSLNVHLQSPTMGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQTVL 757
>gi|119188101|ref|XP_001244657.1| hypothetical protein CIMG_04098 [Coccidioides immitis RS]
Length = 893
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/771 (67%), Positives = 621/771 (80%), Gaps = 18/771 (2%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LAAETAA
Sbjct: 23 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLAAETAAY 82
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ YEI+MK
Sbjct: 83 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYINPKNNRPAPMISQKTYEIVMK 142
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
++A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH +DI+ A
Sbjct: 143 HSAELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHGEDIEKA 202
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+ISK+AG
Sbjct: 203 IETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 262
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGI+PMLRVFN+TARYVDQGG KR GAFA+YLEPWH+
Sbjct: 263 GIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHS 322
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEA GLAD +G E
Sbjct: 323 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGDE 382
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FE LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NLGTI+SS
Sbjct: 383 FEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNLGTIRSS 442
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEIIEYTSP E AVCNLAS+ALP +V PV RG +DF KL
Sbjct: 443 NLCTEIIEYTSPDEVAVCNLASLALPTYVD----PV----------RGE----YDFGKLH 484
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
EVT ++ NLNKIID N+YPV AR+SN RHRPI +GVQGLAD F+ L + F+SPEA+QL
Sbjct: 485 EVTQVLVRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDSPEARQL 544
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
N IFETIY+ AL S +IA +GPYETY SPVS+GILQ DMWNV P+D WDW L+
Sbjct: 545 NIQIFETIYHAALTASCDIAKVDGPYETYEGSPVSQGILQYDMWNVTPTDLWDWDSLKRD 604
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 605 IAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 664
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
+G+WS +KN+II + GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG YIDQSQS
Sbjct: 665 LGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAYIDQSQS 724
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
LNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 725 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 775
>gi|392565961|gb|EIW59137.1| hypothetical protein TRAVEDRAFT_28460 [Trametes versicolor
FP-101664 SS1]
Length = 888
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/786 (65%), Positives = 632/786 (80%), Gaps = 22/786 (2%)
Query: 2 YVVKRDG--RQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDEL 59
+V KR R+E V FDKITAR+ KL YGL +H DPV ++QKV AGVY GVTT +LD L
Sbjct: 4 FVFKRGEHRRKERVQFDKITARIAKLCYGLDKDHVDPVGITQKVIAGVYPGVTTVELDNL 63
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADD 119
AAETAA +TT HPDYA LAARIAVSNLHK TKKSFS I D+YN+ N ++G A +I+ +
Sbjct: 64 AAETAAYLTTKHPDYAILAARIAVSNLHKETKKSFSAVISDLYNYVNPKNGRAAGMISKE 123
Query: 120 IYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH 179
IYEI+ KNA LDS IIYDRDF Y++FGFKTLERSYLLK+ G+V ERPQH++MRV++GIH
Sbjct: 124 IYEIVQKNAEVLDSAIIYDRDFSYNFFGFKTLERSYLLKINGRVAERPQHLIMRVAVGIH 183
Query: 180 KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECA 239
DID AI+TYH+MS+R+FTHASPTLFNAGTP PQLSSCFLV MKDDSIEGIY TLK+CA
Sbjct: 184 GADIDRAIETYHLMSERYFTHASPTLFNAGTPNPQLSSCFLVSMKDDSIEGIYSTLKDCA 243
Query: 240 VISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
ISK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLRV++ TARYVDQGG KR GAFA+
Sbjct: 244 NISKTAGGIGINIHNIRATGSYIAGTNGYSNGIVPMLRVYDATARYVDQGGNKRPGAFAI 303
Query: 300 YLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGL 359
YLEPWHAD+FEF++L+KNHGKEE RARDLFYALW+PDLFM+RV++ G+WSLFCP+EA GL
Sbjct: 304 YLEPWHADVFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVESGGKWSLFCPSEAPGL 363
Query: 360 ADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
+ WG EFE+LY YEREG+AKK ++AQ LW+ IL +QIETG P+ML+KD CN KSNQQN
Sbjct: 364 HEVWGEEFERLYEQYEREGRAKKTIEAQKLWYAILEAQIETGGPFMLYKDACNAKSNQQN 423
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LGTIKSSNLCTEI+EY+SP ETAVCNLASIALP F+ +N
Sbjct: 424 LGTIKSSNLCTEIVEYSSPDETAVCNLASIALPSFI--------------------ENGK 463
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
++F+KL +VT +V NLN+IIDVN+YP+ A+RSN+RHRPIG+GVQGLAD F+ L M F+
Sbjct: 464 YNFQKLHDVTKVVAFNLNRIIDVNHYPIPEAQRSNMRHRPIGVGVQGLADAFMALRMPFD 523
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
EA++LN+ IFETIY+ A++ S E+A + G YETY SP S+G LQ D+W + P+D WD
Sbjct: 524 GVEARKLNQQIFETIYHAAVEASCEMAQQFGTYETYQGSPASEGKLQYDLWGITPTDLWD 583
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ ++++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV
Sbjct: 584 WTSLKAKVAQHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPW 643
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL +L E+G+W+ +KN II ++GS+Q I IP+++K IYKTVWEI Q ++D+A DRG
Sbjct: 644 LLRELVELGLWNDDMKNMIIANNGSIQTIDIIPDDVKAIYKTVWEISQKKVLDLAADRGA 703
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+I QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AIKFTVD+S K
Sbjct: 704 FICQSQSLNVHLQSPTTGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIKFTVDSSFLKNA 763
Query: 780 PEKPEL 785
+KP++
Sbjct: 764 AKKPKV 769
>gi|195578133|ref|XP_002078920.1| GD22272 [Drosophila simulans]
gi|194190929|gb|EDX04505.1| GD22272 [Drosophila simulans]
Length = 812
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/822 (63%), Positives = 645/822 (78%), Gaps = 32/822 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGRQE VHFDKIT+R++KL Y L+ + DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +T NHPDYA LAARIAVSNLHK TKK+FS+ +D+YNH N+ + K PL+++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ KNA L+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRV+IGIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+A++TY+++S+R+FTHASPTLF A T RPQLSSCFL+ M DSIEGI++++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL LKKN GKEE+RARDLFYALW+PDLFM+RV+ NG WSL CP++ GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLH 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE+EG+A + V+AQ+LWF I+ +Q+ETG PYMLFKD CNRKSNQQN+
Sbjct: 372 EVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNLASIAL FV + + +
Sbjct: 432 GTIKCSNLCTEIVEYSSPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT IVT+NLNKIID+NYYP+ AR+SNLRHRP+GIG+QG AD IL+ +ES
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ IFETIYY AL+ S E+A EGPYETY SPVSKGILQ DMW+ +P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIKKHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KN+II GS+Q I IP++++ +YKTVWEI + + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIETIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-------- 772
IDQSQS NIH+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA+AI+FTV+
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
Query: 773 ---TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ P+K E D E KMA +VCSL N++ CM+CGS
Sbjct: 773 NGQNGTAEGSPQKYE--EDRERKMADMVCSLENKDACMSCGS 812
>gi|46446982|ref|YP_008347.1| ribonucleoside-diphosphate reductase large chain [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400623|emb|CAF24072.1| probable ribonucleoside-diphosphate reductase large chain
[Candidatus Protochlamydia amoebophila UWE25]
Length = 773
Score = 1107 bits (2863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/809 (64%), Positives = 645/809 (79%), Gaps = 38/809 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR++ V FDKITAR+ KL YGL + H DPVL++ KV G++ GVTTS+LD LA
Sbjct: 1 MFVTKRDGRKQEVKFDKITARILKLCYGLDSVHIDPVLIAMKVIEGLFDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA++T HPDYA LA+RIA+SNL KNT KSF+ TI ++Y++ + ++G KA LIA+D+
Sbjct: 61 AEVAASLTVKHPDYALLASRIAISNLQKNTNKSFARTIGELYHYIDPKTGKKASLIAEDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+ +A LD+ +IYDRDF YDYFGFKTLERSYLLK+ GKV+ERPQH+LMRVSIGIHK
Sbjct: 121 YKIVQNHAEILDATMIYDRDFGYDYFGFKTLERSYLLKINGKVIERPQHLLMRVSIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI+TYH MS+RWFTHA+PTLFNAGTP PQ+SSCFL+ +K+DSIEGI++TLK CA
Sbjct: 181 NDISAAIETYHWMSERWFTHATPTLFNAGTPYPQMSSCFLMQVKEDSIEGIFDTLKACAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS++AGGIG+S+HNIRATGSYIRGT G SNGI+PMLRV+NDTARY+DQGGGKRKG+FA+Y
Sbjct: 241 ISQAAGGIGLSIHNIRATGSYIRGTGGISNGIIPMLRVYNDTARYIDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI+ FL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ +G WSLFCPNEA L
Sbjct: 301 LEPWHADIYAFLDLRKNHGKEELRARDLFTALWIPDLFMKRVEEDGVWSLFCPNEAPNLH 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFE LY YE+EGKA++V++AQ+LWF+IL SQIETG PYMLFKD CN KSNQ++L
Sbjct: 361 ECWGEEFEHLYCLYEQEGKAREVIKAQDLWFKILESQIETGNPYMLFKDACNYKSNQKHL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEIIEYTSP E AVCNLASIALPRF+ N F
Sbjct: 421 GTIKLSNLCTEIIEYTSPHEAAVCNLASIALPRFI--------------------INGHF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL EVT ++T NL+KIID N YP+ A+ SNL HRPIGIGVQGLAD FILL M F+S
Sbjct: 461 DHQKLFEVTQVITRNLDKIIDENSYPIVEAQTSNLLHRPIGIGVQGLADAFILLRMPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN+ IFETIY+ AL S ++A K+G Y +Y SP+SKGILQ +MWNV PS WDW
Sbjct: 521 KEARALNQAIFETIYFGALTASKDLAKKKGRYPSYEGSPISKGILQYEMWNVKPSSNWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+ +G+RNSLLVA MPTASTSQILGNNECFEPYTSN+Y+RRVLSGEF+VVNKHL
Sbjct: 581 EALKTEIAVHGIRNSLLVALMPTASTSQILGNNECFEPYTSNLYTRRVLSGEFIVVNKHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + +W+ +K +I+ +GS+Q I EIP E+K +YKTVWEIKQ L+DMA DRG +
Sbjct: 641 MRDLVKRELWNEEMKQRILAANGSIQGIEEIPSEIKELYKTVWEIKQKALIDMAADRGPF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLN+ ++ P F K++S+HF W +GLKTGMYYLR +AAA+AIKFTV+ + E+P
Sbjct: 701 ICQSQSLNLFVESPTFAKLSSMHFYAWKKGLKTGMYYLRIKAAAEAIKFTVNQNY--EQP 758
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMAC 809
++ ++ CSL +C++C
Sbjct: 759 QQ------------EIACSL----DCLSC 771
>gi|195403619|ref|XP_002060363.1| GJ14594 [Drosophila virilis]
gi|194140867|gb|EDW57333.1| GJ14594 [Drosophila virilis]
Length = 818
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/826 (62%), Positives = 646/826 (78%), Gaps = 34/826 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGR+E +HFDKIT+R++KL Y L+ + DPV ++ KV G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRKEEIHFDKITSRVQKLCYNLNMDFVDPVSITLKVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA++TT+H DYA LAARIAVSNLHK T+K FS+ +D+Y H N + +P++++
Sbjct: 72 AEIAASLTTHHADYALLAARIAVSNLHKETRKVFSDVFEDLYKHVNRETNETSPMVSEYH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ N+ L+S IIYDRDF Y+YFGFKTLERSYLLK+ GK+ ERPQHMLMRV+IGIH
Sbjct: 132 YNIVANNSDRLNSAIIYDRDFGYNYFGFKTLERSYLLKINGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAI+TY+++S+R+FTHASPTLF A T RPQLSSCFL+ M DSIEGI++T+++CA+
Sbjct: 192 DDIDSAIETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMASDSIEGIFKTVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSISGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL+LKKN GKEEHRARDLFYALW+PDLFM+RV+ N WSL CP++ GL
Sbjct: 312 LEPWHSDVFEFLDLKKNTGKEEHRARDLFYALWIPDLFMKRVEANEDWSLMCPHKCPGLQ 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLY YE+EG+ ++V+AQ+LWF I+ SQ+ETGTPYMLFKD+CNRKSNQQN+
Sbjct: 372 DVWGEEFEKLYVKYEKEGRQNRIVKAQSLWFAIIESQVETGTPYMLFKDSCNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY++P E AVCNLASIAL FV + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TAEKSY 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT IVT+NLNKIID+NYYP+ A++SNLRHRPIGIGVQG AD IL+ +ES
Sbjct: 473 DFKKLKDVTKIVTKNLNKIIDINYYPLPEAKKSNLRHRPIGIGVQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ IFETIYY AL+ S E++ K+GPYETY SPVSKG+LQ DMWN P+D WDW
Sbjct: 533 EEASLLNQQIFETIYYGALEASCELSKKDGPYETYIGSPVSKGVLQYDMWNRSPTDLWDW 592
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+APMPTAST+QI+GNNE FEPYTSNIY+RRVLSGEF VVN HL
Sbjct: 593 DHLKRSIKQHGVRNSLLIAPMPTASTAQIMGNNESFEPYTSNIYTRRVLSGEFQVVNPHL 652
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KN+II GS+Q I IPEE++ +YKTVWEI + + MA DRG +
Sbjct: 653 LRDLTELDLWDDEMKNQIIASRGSIQNIESIPEEIRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV----- 775
IDQSQS NIH+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA+AI+FTVD +V
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVDKNVSVVEI 772
Query: 776 ----------FKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
E + E ++ E +MAQ++CSL N++ C++CGS
Sbjct: 773 NAQNFVDQHASMEMGDTNESDIERERRMAQMICSLENKDACLSCGS 818
>gi|440804772|gb|ELR25641.1| ribonucleosidediphosphate reductase, alpha subunit [Acanthamoeba
castellanii str. Neff]
Length = 825
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/783 (64%), Positives = 634/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLK---KLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLD 57
MYV+KRDG E V FDKIT RL+ +L L+++ DPVLV+QKV GVY GV T+QLD
Sbjct: 1 MYVIKRDGNPERVSFDKITRRLQVLCQLEPALASD-VDPVLVTQKVVQGVYNGVHTAQLD 59
Query: 58 ELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIA 117
LAAETAA M + +P Y LAARIA+SNL K+T +S ET + ++ + N ++GL + LIA
Sbjct: 60 HLAAETAAYMGSLNPGYNVLAARIAISNLQKDTSESLLETARTLHTYVNSKTGLNSALIA 119
Query: 118 DDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIG 177
DD++E+I N L++ I Y+RDF+Y YFGFKTLERSYL +V GK+VERPQHMLMRV++G
Sbjct: 120 DDVFEVIANNTEALEAAIKYERDFNYTYFGFKTLERSYLFRVDGKIVERPQHMLMRVAVG 179
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
+HKD+I + I+TY ++SQ+ FTHA+PTLFNAGTPRPQLSSCFL+ MK+DSIEGIY+TLK+
Sbjct: 180 LHKDNIPAVIETYDLLSQQLFTHATPTLFNAGTPRPQLSSCFLLTMKEDSIEGIYDTLKQ 239
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG++ H IRA+ SYIRGTNGTSNG++PMLRV+NDTARYVDQGGGKRKGAF
Sbjct: 240 CALISKSAGGIGLAAHRIRASNSYIRGTNGTSNGLIPMLRVYNDTARYVDQGGGKRKGAF 299
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
A+YLEPWHADIF+FL+LKKNHGKEE+RARDLFY LW+PDLFM+RV+T G WSLFCPNEA
Sbjct: 300 AIYLEPWHADIFDFLDLKKNHGKEENRARDLFYGLWIPDLFMKRVETGGDWSLFCPNEAP 359
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GL D WG EFE+ Y YE+EG+A++VV+AQ LWF IL SQIETGTPYML+KD CN KSNQ
Sbjct: 360 GLFDSWGKEFEEKYERYEQEGRARRVVKAQELWFAILESQIETGTPYMLYKDACNGKSNQ 419
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
Q+LGTI+SSNLCTE+++YTSP E AVCNLAS+ALP+F+ N
Sbjct: 420 QHLGTIQSSNLCTEVVQYTSPDEVAVCNLASLALPKFI--------------------TN 459
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
FD +KL +V +VT+NLNK+ID+NYYPV AR SN+RHRPIGIGVQGLAD F+++
Sbjct: 460 GEFDHKKLHDVVKVVTKNLNKVIDINYYPVPEARNSNMRHRPIGIGVQGLADVFMIMRHP 519
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR 597
+ES EA++LN+ IFETIYY AL S+E+A EG Y+TY SP SKG LQPD+W V+PSDR
Sbjct: 520 WESDEARELNRAIFETIYYAALVASNELAQVEGTYQTYEGSPASKGKLQPDLWGVVPSDR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I+++G+RNSLLVAPMPTASTSQILGNNECFEPYT+NIY+RR+L+G+F VVN
Sbjct: 580 WDWATLRANIAQHGLRNSLLVAPMPTASTSQILGNNECFEPYTTNIYTRRILAGDFTVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HLL +L + G+WSP +KNK++ +GSVQ+I EIP+++K +YKTVWE+ Q ++DMA DR
Sbjct: 640 EHLLRELQQRGLWSPALKNKLVSHNGSVQRIEEIPDDIKKLYKTVWELPQRVIIDMAADR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
YIDQSQSLN++M +P+F K+TS+HF W +GLKTGMYYLR+R AA+AI+FTVD
Sbjct: 700 SAYIDQSQSLNVYMGEPSFAKLTSMHFYAWRKGLKTGMYYLRTRPAANAIQFTVDQEAAA 759
Query: 778 EKP 780
P
Sbjct: 760 TVP 762
>gi|358058031|dbj|GAA96276.1| hypothetical protein E5Q_02942 [Mixia osmundae IAM 14324]
Length = 980
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/778 (65%), Positives = 626/778 (80%), Gaps = 19/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KRDGR+E V FDKITAR+ KL YGL T +P+ +++KV +GVY+GVTT +LD LA
Sbjct: 109 MVVFKRDGRREQVAFDKITARINKLCYGLDTNFVEPIEITKKVISGVYQGVTTVELDNLA 168
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIA+SNLHK TKK+FS ++D+Y N ++ +P+I+D+
Sbjct: 169 AETAAYMTTRHPDYAILAARIAISNLHKETKKTFSSVVEDLYRWVNPKNNKASPMISDET 228
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ +M+NA L+S +IYDRDF+Y+YFGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 229 YKAVMENADVLNSAVIYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 288
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+I+ +++Y++MS+R+FTHASPTLFNAGTP PQLSSCFLVCMKDDSI+GIY+TLK CA+
Sbjct: 289 SNIEKVVESYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIDGIYDTLKTCAM 348
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 349 ISKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 408
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHAD+F+FL+L+KNHGKEE RARDLFYALW+PD+FM RV+ NG W LFCP EA GLA
Sbjct: 409 IEPWHADVFDFLDLRKNHGKEEVRARDLFYALWIPDMFMRRVEQNGDWPLFCPAEAPGLA 468
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EF+ L+ YE+EG+AKK ++AQ LW+ IL SQ+ETG P+ML+KD N KSNQ+NL
Sbjct: 469 EVYGKEFDALFEKYEKEGRAKKTIKAQKLWYAILESQVETGNPFMLYKDAANSKSNQKNL 528
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEY++P E AVCNLASIALP FV K +
Sbjct: 529 GTIKSSNLCTEIIEYSAPDEVAVCNLASIALPTFVTGKGT-------------------Y 569
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT +VT NLN+IIDVNYYPV AR SN+RHRPIGIGVQGLAD F+ L + F+S
Sbjct: 570 DFQKLHDVTKVVTRNLNRIIDVNYYPVIEARNSNMRHRPIGIGVQGLADAFMALRLPFDS 629
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
P A++LN IFETIY+ +L+ SS+IAA +GPY TY SP+SKG LQ DMW P+D WDW
Sbjct: 630 PAAKKLNIQIFETIYHASLEASSDIAAVDGPYSTYEGSPISKGELQFDMWGKTPTDLWDW 689
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I+K G RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 690 DSLREKIAKTGTRNSLLMAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 749
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+G+W +KN+II +GS+ I IP++LK IY+TVWEI Q +++DM+ DRG Y
Sbjct: 750 LRDLVELGLWDDELKNRIIAHNGSIANINGIPQDLKAIYRTVWEISQKSIIDMSADRGAY 809
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
IDQSQSLNIH+ P F ++TS++F W +GLKTGMYYLR++AAA AI+FTV ++ E
Sbjct: 810 IDQSQSLNIHLQSPTFAQLTSMNFYGWKKGLKTGMYYLRTKAAASAIQFTVSQALQDE 867
>gi|432898484|ref|XP_004076524.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oryzias latipes]
Length = 793
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/815 (65%), Positives = 646/815 (79%), Gaps = 26/815 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+EAV FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRREAVSFDKITSRIQKLCYGLNSDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPLNKRHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
EI+++N L+S IIYDRDF Y++FGFKTLERSYLLK+ GK ERPQHMLMRV++GIHK
Sbjct: 121 LEIVLENKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKAAERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSI+GIY+TLK+CA+
Sbjct: 181 TDIDEAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SKSAGGIG++V IRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 VSKSAGGIGLAVSCIRATGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+ N WSL CP+E GL
Sbjct: 301 LEPWHADVFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVENNQDWSLMCPSECPGLE 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFE+LY YE+EG+AK+VV+AQ +W+ I+ SQ ETGTPYML+KD CN KSNQQNL
Sbjct: 361 ECWGEEFEQLYIRYEKEGRAKRVVKAQQVWYAIIESQTETGTPYMLYKDACNGKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLASIAL +V + + F
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPEKTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA VT ++ +NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ AFES
Sbjct: 462 DFKKLASVTKVIVKNLNKIIDINYYPVAEAERSNRRHRPIGIGVQGLADAFILMRYAFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LN IFETIYY AL+ S E+AA G YETY SPVSKGILQ DMW P+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAHYGTYETYAGSPVSKGILQYDMWGKTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+ +GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 EALKAKIALHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN++I +GS+Q+I IP +LK +YKTVWEI Q T++ MA DRG Y
Sbjct: 642 LKDLTERGLWNEDMKNQLIAQNGSIQEIEGIPADLKQLYKTVWEISQKTVLKMAADRGAY 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQSLNIH+ +PN+ K+TS+HF W GLKTGMYYLR++ AA+ I+FT++ KE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNKEKLKEAQ 761
Query: 779 --KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + EL E A +VCSL N++EC+ CGS
Sbjct: 762 TTRSAEEEL---RELNNAAMVCSLANKDECLMCGS 793
>gi|384500853|gb|EIE91344.1| hypothetical protein RO3G_16055 [Rhizopus delemar RA 99-880]
Length = 803
Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/819 (62%), Positives = 643/819 (78%), Gaps = 28/819 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E V FDKIT+R+ KL YGL+ ++ PV +SQKV +GVY+G+TT +LD LA
Sbjct: 1 MFVIKRDGRKEKVLFDKITSRISKLCYGLNEDYVIPVKISQKVISGVYQGITTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTTNHPD+A+LAARI +SNL K T FS ++ +Y+H + + +PL++ ++
Sbjct: 61 AETAAYMTTNHPDFATLAARIVISNLQKETDDKFSAVVQKLYHHEHPKLKQASPLVSKEL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M NA+ +D+ I ++RD+D+++FGFKTLERSYLLK+ G++VERPQ+M+MRV+IGIH
Sbjct: 121 YDVVMANASKIDAAIKHERDYDFNFFGFKTLERSYLLKINGRIVERPQYMIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ A KTY +MS ++FTHA+PTLFNAGTPRPQLSSCFLV M++DSIEGIY+TL CA
Sbjct: 181 GDLEGAFKTYDLMSSKYFTHATPTLFNAGTPRPQLSSCFLVQMREDSIEGIYDTLTTCAR 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+GV+ IR +GSYI GTNGTSNG++PMLRVFNDTAR+V QGGGKR G FA+Y
Sbjct: 241 ISKAAGGVGVAAQKIRGSGSYIAGTNGTSNGVIPMLRVFNDTARFVTQGGGKRNGNFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL+L+KN+G EE RARDLF LWVPDLFM+RV+ NG+WSLFCP+EA GL
Sbjct: 301 LEPWHVDVFDFLDLRKNNGAEEMRARDLFLGLWVPDLFMKRVEQNGKWSLFCPDEAPGLW 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +F+ LY YE EGKA+K ++AQ LWF IL +Q ETG PYML+KD CN KSNQ+NL
Sbjct: 361 DSYGEKFDALYIKYENEGKARKTIEAQKLWFAILEAQTETGMPYMLYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI SSNLCTEIIEYTSP E AVCNLAS+ALP+FV KD + F
Sbjct: 421 GTITSSNLCTEIIEYTSPDEVAVCNLASLALPKFV-NKDT-----------------KTF 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +VT NLNK+IDVNYYPVE AR SN+RHRPIG+GVQGLAD FIL+G F+S
Sbjct: 463 DFAKLHEVTKVVTRNLNKVIDVNYYPVEEARNSNMRHRPIGLGVQGLADAFILMGFPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA QLN+DIFE IY+ AL+ S E+A + GPYETY SP+S+GILQ DMWNV SD DW
Sbjct: 523 PEAAQLNRDIFERIYFAALEASCELAKEHGPYETYLGSPISQGILQHDMWNVKDSDILDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRV SGEF VVN++L
Sbjct: 583 DTLRSNIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVQSGEFQVVNQYL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L++L ++G+W+ IKN +I GS+Q+IP IP+ LK +YKTVWEI Q T++DMA DRG Y
Sbjct: 643 LNELVDLGLWNDNIKNMMIAHGGSIQRIPGIPDRLKELYKTVWEISQRTIIDMAADRGAY 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQS+N+ +P+F K+TS+HF W +GLKTGMYYLRSR A DAIKFTVD K+
Sbjct: 703 IDQSQSMNLFTAEPSFGKLTSMHFYAWKKGLKTGMYYLRSRPAVDAIKFTVDQLALKQMS 762
Query: 779 ----KPEK----PELVVDDETKMAQVVCSLTNREECMAC 809
K +K E ++ ++AQ+ CS+ NR+ C+ C
Sbjct: 763 LSESKDDKFDSAKEAEEAEQRRLAQLQCSIDNRDACLMC 801
>gi|295659650|ref|XP_002790383.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226281835|gb|EEH37401.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 878
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/777 (66%), Positives = 617/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNRRPAPMISQST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV+IGIH
Sbjct: 121 YEIVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG+W+LFCPNEA GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ KK ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY SP E AVCNLASIALP FV RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD--------------AVRGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +V NLN+IID NYYPVE A+RSN RHRPI GVQGLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN IFETIY+ L S E+A +GPY +Y SPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKLLNIQIFETIYHACLTASCELAKVDGPYSSYEGSPVSQGILQYDMWGVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GS+Q IP IP+++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|156408425|ref|XP_001641857.1| predicted protein [Nematostella vectensis]
gi|156228997|gb|EDO49794.1| predicted protein [Nematostella vectensis]
Length = 810
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/814 (63%), Positives = 632/814 (77%), Gaps = 21/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KR+G E V+ DKIT+R+ KL YGL E P+ ++ KV +G+Y+GV T++LD LA
Sbjct: 11 LYVLKRNGDSERVYLDKITSRISKLCYGLKNEFVKPINITMKVISGIYQGVKTTELDTLA 70
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT HPDYA LAARI VSNLHK TKK FSE ++++YN+ N ++ +PLI+ +
Sbjct: 71 AETAASMTTKHPDYAILAARIEVSNLHKETKKVFSEVMEELYNYVNPKNNKHSPLISKET 130
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+II K+A L+S IIYDRD+ Y+YFGFKTL RSYLLK+ GKV ERPQHMLMRVS+GIH
Sbjct: 131 LDIIQKHADRLNSAIIYDRDYQYNYFGFKTLMRSYLLKINGKVAERPQHMLMRVSVGIHG 190
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY++MS++WFTHASPTLFNAGT RPQ+SSCFL+ M DDSIEGIY TL+ CA+
Sbjct: 191 EDIDAAIETYNLMSEKWFTHASPTLFNAGTNRPQMSSCFLLTMSDDSIEGIYGTLRTCAL 250
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+VH IRA GSYI GTNG SNG+VPMLRV++ TARYVDQGG KR GAFA+Y
Sbjct: 251 ISKNAGGIGVNVHCIRAAGSYIAGTNGHSNGLVPMLRVYDSTARYVDQGGNKRPGAFAIY 310
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI EFL+LKKN GKEE RARDLFYALW+PDLFM+RV+ +G WSL CPN+ GL
Sbjct: 311 LEPWHADILEFLDLKKNTGKEEQRARDLFYALWIPDLFMKRVEADGMWSLMCPNQCPGLQ 370
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G +FEKLY YE +GK + ++AQ LWF IL SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 371 DCYGEKFEKLYEKYESQGKYMRQIKAQKLWFAILESQTETGTPYMLYKDACNSKSNQKNL 430
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY++P E AVCNLASIAL RFV P E F
Sbjct: 431 GTIKCSNLCTEIVEYSAPDEVAVCNLASIALNRFVNVDKSPPE----------------F 474
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL EVT +VT+NLNKIIDVNYYPV AR+SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 475 NFQKLFEVTQVVTKNLNKIIDVNYYPVPEARKSNFRHRPIGIGVQGLADAFILMRYPFES 534
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+AQ+LNK IFETIYY A+ S ++AA GPYETY SP S+G+LQ D+WNV PS+ WDW
Sbjct: 535 QKAQELNKLIFETIYYGAVTASCDLAATNGPYETYEGSPASQGLLQYDLWNVTPSNLWDW 594
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ + ++G+RNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSGEF +VN HL
Sbjct: 595 EALKKKVKEHGLRNSLLIAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQIVNHHL 654
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTEMG+W+ +KN++I ++GS+Q I EIP +LK +YKTVWEIKQ L+DMA DRG +
Sbjct: 655 LKDLTEMGLWNDGMKNQLIANNGSIQDIKEIPADLKALYKTVWEIKQRVLIDMAADRGAF 714
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS N+ + QP F K+TS+HF W +GLKTGMYYLRSR A +AI+FTVD + +K
Sbjct: 715 IDQSQSFNVFIAQPTFSKLTSMHFYGWKKGLKTGMYYLRSRPAVNAIQFTVDQTALAKKK 774
Query: 781 EKPELVVDDETKM-----AQVVCSLTNREECMAC 809
+E K A C N + C+ C
Sbjct: 775 ASDSSPTSNEEKPKKDEDAAAACRRDNPDGCLMC 808
>gi|302689939|ref|XP_003034649.1| hypothetical protein SCHCODRAFT_75631 [Schizophyllum commune H4-8]
gi|300108344|gb|EFI99746.1| hypothetical protein SCHCODRAFT_75631 [Schizophyllum commune H4-8]
Length = 892
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/777 (64%), Positives = 623/777 (80%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KR R+E + KI +R+KKL YGL H DP+ ++ KV GVY GVTT +LD LAA
Sbjct: 5 YVFKRGTRKEQIQLGKIQSRIKKLCYGLDMRHVDPLAITIKVVQGVYHGVTTVELDNLAA 64
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIA+SNLHK T KSFS+ ++ +YN+ N ++G +A +I+D Y
Sbjct: 65 ETAAYLTTQHPDYAVLAARIAISNLHKETTKSFSQVVEKLYNYVNPKNGKRASMISDATY 124
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+++M NA LDS IIYDRDF Y+YFGFKTLERSYLL++ G+V ERPQHM+MRV++GIH D
Sbjct: 125 KVVMDNAETLDSAIIYDRDFAYNYFGFKTLERSYLLRINGRVAERPQHMIMRVAVGIHGD 184
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
+I+ ++TY++MS R+FTHASPTLFNAGTP PQ+SSCFLV MKDDSIEGIY+TLK+CA+I
Sbjct: 185 NIERVLETYNLMSDRYFTHASPTLFNAGTPHPQMSSCFLVSMKDDSIEGIYDTLKQCAMI 244
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 245 SKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 304
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWH D+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+RV++ G WSLFCPNEA GLAD
Sbjct: 305 EPWHPDVFEFLDLRKNHGKEEQRARDLFYALWIPDLFMKRVESGGDWSLFCPNEAPGLAD 364
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
CWG EFE LY YE EG+ +K + AQ LW+ IL +QIETG P+ML+KD+ NRKSNQQNLG
Sbjct: 365 CWGDEFEALYAKYEAEGRERKKIPAQKLWYAILEAQIETGNPFMLYKDSANRKSNQQNLG 424
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY++P ETAVCNLAS+ALP F+R+ +D
Sbjct: 425 TIKSSNLCTEIIEYSAPDETAVCNLASLALPTFIRDG--------------------VYD 464
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL +VT +VT NLNKIIDVNYYPV ARRSN+RHRPIG+GVQGLAD F+ L M F+SP
Sbjct: 465 FQKLHDVTKVVTRNLNKIIDVNYYPVPEARRSNMRHRPIGLGVQGLADAFMALRMPFDSP 524
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA++LNK IFETIY+ A + SS++A +EGPYET+ SP S+G LQ D+W V PSD WDW
Sbjct: 525 EARELNKQIFETIYHAACEASSDLAEEEGPYETWEGSPASQGQLQFDLWGVTPSDLWDWA 584
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I++ G+RN+LLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 585 SLKAKIARTGMRNALLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 644
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L + G+W +KN+II ++GS+Q I IP+++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 645 RELVDKGLWDDKMKNQIIANNGSIQSIARIPDDIKAIYKTVWEISQKKVLDLAADRGPFI 704
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R A+ AI+FTVD ++ KE
Sbjct: 705 CQSQSLNVHLAAPTLGQLTSMHFYGWKKGLKTGMYYLRTRPASQAIQFTVDQAMLKE 761
>gi|17352481|ref|NP_477027.1| ribonucleoside diphosphate reductase large subunit [Drosophila
melanogaster]
gi|12644286|sp|P48591.2|RIR1_DROME RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|4928448|gb|AAD33590.1|AF132143_1 ribonucleoside reductase M1 subunit [Drosophila melanogaster]
gi|21430662|gb|AAM51009.1| RE58177p [Drosophila melanogaster]
gi|22946135|gb|AAF52913.2| ribonucleoside diphosphate reductase large subunit [Drosophila
melanogaster]
gi|220942628|gb|ACL83857.1| RnrL-PA [synthetic construct]
Length = 812
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/822 (62%), Positives = 643/822 (78%), Gaps = 32/822 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGRQE VHFDKIT+R++KL Y L+ + DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +T NHPDYA LAARIAVSNLHK TKK+FS+ +D+YNH N+ + K PL+++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ KNA L+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRV+IGIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+A++TY+++S+R+FTHASPTLF A T RPQLSSCFL+ M DSIEGI++++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL LKKN GKEE+RARDLFYALW+PDLFM+RV+ NG WSL CP++ GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLH 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLY YE+EG+A + V+AQ+LWF I+ +Q+ETG PYMLFKD CNRKSNQQN+
Sbjct: 372 DVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY++P E AVCNLASIAL FV + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT IVT+NLNKIID+NYYP+ AR+SNLRHRP+GIG+QG AD IL+ +ES
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ IFETIYY AL+ S E+A EGPYETY SPVSKGILQ DMW+ +P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I +GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KN+II GS+Q I IP +++ +YKTVWEI + + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-------- 772
IDQSQS NIH+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA+AI+FTV+
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
Query: 773 ---TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ P+K E D E KMA +VCSL N++ CM+CGS
Sbjct: 773 NGQNGTAEGSPQKYE--EDRERKMADMVCSLENKDACMSCGS 812
>gi|353029222|gb|ABF71875.2| ribonucleotide reductase large subunit [Neurospora crassa]
Length = 923
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 617/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S I ++YN+ N R+G +P+IA D+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MS + FTHASPTLFNAGTP+PQLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NGQW+L CP+E GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EGK +K V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+AL F+ +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLNKIID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L M F+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A +LN IFETIY+ AL S ++A ++GPY TY SPVS+GILQ DMWNV P++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL EMG+WS +KN+II + GS+Q I IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|336468943|gb|EGO57106.1| ribonucleotide reductase large subunit [Neurospora tetrasperma FGSC
2508]
gi|350288752|gb|EGZ69977.1| ribonucleotide reductase large subunit [Neurospora tetrasperma FGSC
2509]
Length = 920
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 617/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S I ++YN+ N R+G +P+IA D+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSFVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MS + FTHASPTLFNAGTP+PQLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NGQW+L CP+E GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EGK +K V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+AL F+ +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLNKIID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L M F+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A +LN IFETIY+ AL S ++A ++GPY TY SPVS+GILQ DMWNV P++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL EMG+WS +KN+II + GS+Q I IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|407917669|gb|EKG10973.1| Ribonucleotide reductase large subunit [Macrophomina phaseolina
MS6]
Length = 908
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/777 (65%), Positives = 624/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH DP ++QKV +GVY+GV+T +LD LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPEHVDPATITQKVISGVYQGVSTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+YN+ N ++ +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSAVIADLYNYVNPKNRKHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+EI+ K+A L+S I+YDRDF Y YFGFKTLERSYLL++ GKV ERPQ M+MRV++GIH
Sbjct: 121 FEIVNKHAEELNSAIVYDRDFQYQYFGFKTLERSYLLRIDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ AI+TY++MS ++FTHASPTLFNAGTP+PQL+SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDIEKAIETYNLMSLKYFTHASPTLFNAGTPKPQLASCFLIDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFSFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEQNGTWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ ++ V+AQ LW+ IL +Q+ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGEEFEALYEQYEKEGRGRETVRAQKLWYAILEAQVETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLC EI+EYT+P E AVCNLAS+ALP FV DV + +
Sbjct: 421 GTIRSSNLCCEIVEYTAPDEVAVCNLASLALPTFV---DV---------------EEGVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT ++ +NLNKIID+N+YPV AR+SN+RHRPI +GV GLAD F+ L M F+S
Sbjct: 463 DFKKLHEVTQVLVKNLNKIIDINHYPVPEARKSNMRHRPIAVGVNGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S E+A ++GPYET+ SP S+GILQ DMWN P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHAALTASVELAKRDGPYETFQGSPASQGILQYDMWNKTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++G RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKAEIAQHGTRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II +GS+Q+IP IP+++K +YKTVWE+ Q T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDQMKNRIIASNGSIQQIPNIPDDIKALYKTVWELSQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|402076101|gb|EJT71524.1| ribonucleoside-diphosphate reductase large subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 920
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 620/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGREERVQFDKITARVSRLCYGLDLNHVDPVKITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D++++ N ++G +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVISDLFHYVNPKNGRLSPMIAQET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ +M++ A DS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YDCVMRHKAEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++ +TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 181 DNLERVFETYNLMSSKYFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YER GK +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYERAGKGRKTLKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP+F+ + +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFIDYNE------------------GVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT +V NLNKIIDVNYYPV+ AR SN+RHRPIG+GVQGLAD F+ L + FES
Sbjct: 463 DFQKLHKVTQVVVRNLNKIIDVNYYPVQEARNSNMRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ L S E+A ++G Y TY SPVS+GILQ DMWNV PS+ WDW
Sbjct: 523 PEARELNKQIFETIYHAGLTASCELAREQGTYSTYEGSPVSQGILQYDMWNVKPSELWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 EGLKADIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+G+WS +KN+II + GS+Q I IPE+ K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVELGLWSDDMKNRIIAEGGSIQNIASIPEDTKRLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|195339753|ref|XP_002036481.1| GM11750 [Drosophila sechellia]
gi|194130361|gb|EDW52404.1| GM11750 [Drosophila sechellia]
Length = 812
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/822 (62%), Positives = 644/822 (78%), Gaps = 32/822 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGRQE VHFDKIT+R++KL Y L+ + DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +T NHPDYA LAARIAVSNLHK TKK+FS+ +D+YNH N+ + K PL+++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ KNA L+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRV+IGIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+A++TY+++S+R+FTHASPTLF A T RPQLSSCFL+ M DSIEGI++++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL LKKN GKEE+RARDLFYALW+PDLFM+RV+ NG WSL CP++ GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLH 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE+EG+A + V+AQ+LWF I+ +Q+ETG PYMLFKD CNRKSNQQN+
Sbjct: 372 EVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNLASIAL FV + + +
Sbjct: 432 GTIKCSNLCTEIVEYSSPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT IVT+NLNKIID+NYYP+ AR+SNLRHRP+GIG+QG AD IL+ +ES
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ IFETIYY AL+ S E+A EG YETY SPVSKGILQ DMW+ +P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGAYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIKKHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KN+II GS+Q I IP++++ +YKTVWEI + + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIETIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-------- 772
IDQSQS NIH+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA+AI+FTV+
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
Query: 773 ---TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ P+K E D E KMA +VCSL N++ CM+CGS
Sbjct: 773 NGQNGTAEGSPQKYE--EDRERKMADMVCSLENKDACMSCGS 812
>gi|85081938|ref|XP_956818.1| ribonucleoside-diphosphate reductase large chain [Neurospora crassa
OR74A]
gi|30316299|sp|Q9UW15.2|RIR1_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase large subunit
gi|11256439|pir||T51069 ribonucleoside-diphosphate reductase large chain (un-24gene)
[imported] - Neurospora crassa
gi|9368573|emb|CAB98233.1| ribonucleoside-diphosphate reductase large chain (un-24)
[Neurospora crassa]
gi|28917896|gb|EAA27582.1| ribonucleoside-diphosphate reductase large chain [Neurospora crassa
OR74A]
Length = 929
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 617/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S I ++YN+ N R+G +P+IA D+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MS + FTHASPTLFNAGTP+PQLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NGQW+L CP+E GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EGK +K V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+AL F+ +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLNKIID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L M F+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A +LN IFETIY+ AL S ++A ++GPY TY SPVS+GILQ DMWNV P++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL EMG+WS +KN+II + GS+Q I IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|302498356|ref|XP_003011176.1| hypothetical protein ARB_02698 [Arthroderma benhamiae CBS 112371]
gi|291174724|gb|EFE30536.1| hypothetical protein ARB_02698 [Arthroderma benhamiae CBS 112371]
Length = 870
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/771 (66%), Positives = 617/771 (80%), Gaps = 18/771 (2%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGR+E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
MT HPDYA LAARIAVSNLHK TKK FS I+D+Y++ N ++G AP+I++ EI+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIEDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRV++GIH +D++
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEA GLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FE LY YE+EG+ + ++AQ LW+ IL +Q ETG P+ML+KD+CNRKSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEI+EYT+P E AVCNLASIALP FV RG +DF KL
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFVD--------------AVRGE----YDFGKLH 465
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L + F+SPEA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
N IFET+Y+ AL S E+A +GPY +Y SPVS+GILQ DMWNV P+D WDW L+
Sbjct: 526 NTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDGLKAE 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
+G+WS +KN+II D GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +IDQSQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
LNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 756
>gi|255949828|ref|XP_002565681.1| Pc22g17720 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592698|emb|CAP99060.1| Pc22g17720 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 863
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/772 (66%), Positives = 618/772 (80%), Gaps = 18/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GV T +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHIDAAAITQKVISGVYQGVGTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSMVISDLYHYVNPKNNKPAPMISKEH 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ G V ERPQH+LMRV++GIH
Sbjct: 121 YEIVMKHAEELNSAIVYDRDFNYNFFGFKTLERSYLLRINGTVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TYH+MSQ++FTHASPTLFNA TP+PQL+SCFLV M DSIEGIY+TLK CA+
Sbjct: 181 EDIEKAIETYHLMSQKYFTHASPTLFNAATPQPQLASCFLVDMSADSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGEEFDALYAKYEQEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVDS--------------ARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVVQVLVHNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL SS+IA K GPYETY SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHGALTASSDIAKKLGPYETYPGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKAKIAETGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GSVQ IP IP ++K +YKTVWEI Q ++ MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRNILQMAADRGAY 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVD 754
>gi|302915563|ref|XP_003051592.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732531|gb|EEU45879.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 893
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/782 (65%), Positives = 618/782 (79%), Gaps = 23/782 (2%)
Query: 1 MYVVKR-----DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQ 55
M+V KR DGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT Q
Sbjct: 1 MFVRKRADNLSDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQ 60
Query: 56 LDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPL 115
LD+LAAETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++ +P+
Sbjct: 61 LDDLAAETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNDRASPM 120
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
I+ + YE +M++ LDS I+YDRDF Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV+
Sbjct: 121 ISQETYECVMRHKEELDSAIVYDRDFQYQYFGFKTLERSYLLKIDGKIVERPQHMIMRVA 180
Query: 176 IGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
+GI D+I+ ++TY++MS ++FTHASPTLFNAGTP+PQLSSCFLV MK+DSIEGIY+TL
Sbjct: 181 VGIWGDNIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTL 240
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K CA+ISK AGGIG++VH IRATGSYI GTNGTSNG+ PMLRVFN+TARYVDQGG KR G
Sbjct: 241 KTCAMISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVTPMLRVFNNTARYVDQGGNKRPG 300
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
AFA+YLEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE
Sbjct: 301 AFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNE 360
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
GLADC+G EFE LY YE+ GK +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKS
Sbjct: 361 CPGLADCYGEEFEALYEKYEKAGKGRKTMKAQKLWYAILEAQTETGNPFMLYKDHCNRKS 420
Query: 416 NQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGS 475
NQ+NLGTI+SSNLCTEIIEY +P E AVCNLAS+ALP F+ +
Sbjct: 421 NQKNLGTIRSSNLCTEIIEYCAPDEVAVCNLASLALPSFINYDEA--------------- 465
Query: 476 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
+DF+KL EVT V NLN+IIDVN+YPV AR SN+RHRPIG+GVQGLAD F+ L
Sbjct: 466 ---CYDFQKLHEVTQTVVRNLNRIIDVNHYPVPEARNSNMRHRPIGVGVQGLADAFLALR 522
Query: 536 MAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS 595
M FESPEA++LNK IFETIY+ AL S ++A +EGPY T+ SP S+GILQ DMWNV PS
Sbjct: 523 MPFESPEARELNKQIFETIYHAALTASVQLAKEEGPYSTFKGSPASEGILQFDMWNVKPS 582
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
D WDW LR+ + ++G RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF V
Sbjct: 583 DLWDWESLREQVKEHGTRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQV 642
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VN LL DL +MG+WS ++KN+II ++GS+Q IP IP E+K +YKTVWEI Q +V MA
Sbjct: 643 VNPWLLKDLVDMGLWSDSMKNRIIAENGSIQNIPNIPAEVKALYKTVWEISQRQVVQMAA 702
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG +IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD
Sbjct: 703 DRGAFIDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQQA 762
Query: 776 FK 777
K
Sbjct: 763 LK 764
>gi|386819560|ref|ZP_10106776.1| ribonucleoside-diphosphate reductase, alpha subunit [Joostella
marina DSM 19592]
gi|386424666|gb|EIJ38496.1| ribonucleoside-diphosphate reductase, alpha subunit [Joostella
marina DSM 19592]
Length = 810
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/831 (63%), Positives = 646/831 (77%), Gaps = 41/831 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E + FDKITAR++KL YGL+ E DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVIKRDGRREPIMFDKITARVRKLCYGLN-ELVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI+VSNLHKNTKKSFSET+ D+YN+ N R+G APL++D++
Sbjct: 60 AEIAATMTTTHPDYARLAARISVSNLHKNTKKSFSETMADLYNYVNPRTGKAAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+I KNA LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVS+GIH
Sbjct: 120 YEVIQKNADKLDSLIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+DS ++TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ K+DSI+GIY+TLK+ A
Sbjct: 180 DDLDSVLETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLITTKEDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FAVY
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAVY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+PDLFM+RV+ NG+W+L CPNE GL
Sbjct: 300 IEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMPDLFMKRVEENGEWTLMCPNECPGLC 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D EF+ LY YE EGK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DVHSDEFDALYLKYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP FV+ + F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFVKGNE--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +VT VT NLN++ID NYYPVE AR SN RHRPIG+GVQGLADTFI L M F S
Sbjct: 460 DHKELYKVTKRVTRNLNRVIDRNYYPVEEARNSNFRHRPIGLGVQGLADTFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN+DIFET+Y+ A+ S E+A +EGPYETY SP+S+G Q ++W + S
Sbjct: 520 DEAKKLNQDIFETLYFAAVTASMEMAKEEGPYETYKGSPISQGDFQHNLWGIKDDELSGN 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWDKLRKEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL ++G+W+ +K +++ +GS+Q I IP++++ +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVDLGLWTEELKQELMRANGSIQHIETIPQDIRDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR+++A DAIKFT+D +
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLDNTKKT 759
Query: 778 EK--PEKPELVVDDETKMAQVVCSLTNREE---------------CMACGS 811
EK E E+ K A V + +E C+ CGS
Sbjct: 760 EKVPAEAAEVKASVAGKAAPVAVEPLSPQELKEMLAKSRDAEDDDCLMCGS 810
>gi|5733808|gb|AAD49743.1| ribonucleotide reductase large subunit [Neurospora crassa]
Length = 929
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 617/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S I ++YN+ N R+G +P+IA D+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MS + FTHASPTLFNAGTP+PQLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NGQW+L CP+E GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EGK +K V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+AL F+ +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLNKIID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L M F+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A +LN IFETIY+ AL S ++A ++GPY TY SPVS+GILQ DMWNV P++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL EMG+WS +KN+II + GS+Q I IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|302657477|ref|XP_003020459.1| hypothetical protein TRV_05425 [Trichophyton verrucosum HKI 0517]
gi|291184296|gb|EFE39841.1| hypothetical protein TRV_05425 [Trichophyton verrucosum HKI 0517]
Length = 872
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/771 (66%), Positives = 617/771 (80%), Gaps = 18/771 (2%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGR+E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
MT HPDYA LAARIAVSNLHK TKK FS I+D+Y++ N ++G AP+I++ EI+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIEDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRV++GIH +D++
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEA GLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FE LY YE+EG+ + ++AQ LW+ IL +Q ETG P+ML+KD+CNRKSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEI+EYT+P E AVCNLASIALP FV RG +DF KL
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFVD--------------AVRGE----YDFGKLH 465
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L + F+SPEA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
N IFET+Y+ AL S E+A +GPY +Y SPVS+GILQ DMWNV P+D WDW L+
Sbjct: 526 NTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDGLKAE 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
+G+WS +KN+II D GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +IDQSQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
LNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 756
>gi|195473603|ref|XP_002089082.1| GE26085 [Drosophila yakuba]
gi|194175183|gb|EDW88794.1| GE26085 [Drosophila yakuba]
Length = 812
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/822 (62%), Positives = 643/822 (78%), Gaps = 32/822 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGRQE VHFDKIT+R++KL Y L+ + DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +T NHPDYA LAARIAVSNLHK TKK FS+ +D+Y H N+ + K PL+++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKVFSDVFEDLYEHVNKETNQKVPLVSEFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ KNA L+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRV+IGIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+A++TY+++S+R+FTHASPTLF A T RPQLSSCFL+ M DSIEGI++++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL LKKN GKEE+RARDLFYALW+PDLFM+RV+ NG WSL CP++ GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLQ 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLY YE+EG+A + V+AQ+LWF I+ +Q+ETG PYMLFKD CNRKSNQQN+
Sbjct: 372 DVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY++P E AVCNLASIAL FV + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT IVT+NLNKIID+NYYP+ A++SNLRHRP+GIGVQG AD IL+ +ES
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEAKKSNLRHRPVGIGVQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ IFETIYY AL+ S E+A EGPYETY SPVSKGILQ DMW+ +P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQAEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIKQHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KN+II GS+Q I IP++++ +YKTVWEI + + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIEAIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-------- 772
IDQSQS NIH+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA+AI+FTV+
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSI 772
Query: 773 ---TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ P+K E D E KMA +VCSL N++ CM+CGS
Sbjct: 773 NGQNGASEGSPQKFE--EDRERKMADMVCSLENKDACMSCGS 812
>gi|448118019|ref|XP_004203399.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
gi|448120456|ref|XP_004203982.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
gi|359384267|emb|CCE78971.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
gi|359384850|emb|CCE78385.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
Length = 860
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/774 (65%), Positives = 635/774 (82%), Gaps = 16/774 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL TEH D V ++Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARIQRLCYGLDTEHVDAVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K FS+ K +Y + N ++GL +P+I+D+
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVCKQLYEYVNPKTGLHSPMISDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+I +NA L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YEVIQRNADELNSAIVYDRDFNYNYFGFKTLERSYLLRIDGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI I++Y++MSQR+FTH SPTLFNAGTP PQ+SSCFLV MK+DSI+GIY+TLK CA+
Sbjct: 181 EDIPRVIESYNLMSQRFFTHGSPTLFNAGTPLPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRATGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA+GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEATGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YE+EG+ + V+AQ LW+ IL +Q ETGTP+ML+KD CN+K+NQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKEGRGRSTVKAQKLWYSILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP E AVCNLASIALP FV EKD + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPDEVAVCNLASIALPSFV-EKD---------------ATSCWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL EVT +VT NLN+IID NYYPVE ARRSN+++RPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFEKLHEVTKVVTRNLNRIIDRNYYPVEQARRSNMKNRPIALGVQGLADAFMELRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A+++S E+A EGPYETY SP SKG+L D+W+ P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHAAVESSVELAEIEGPYETYEGSPASKGLLSFDLWDRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN ++
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYM 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ +KN II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR Y
Sbjct: 645 LRDLVDLGLWNDAMKNNIIANNGSIQGLPNIPDEIKSLYKTVWEISQKHIIDMAADRAAY 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
IDQSQSLNIH+ P K+TS+HF W RGLKTGMYYLR++AAA AI+FTVD +
Sbjct: 705 IDQSQSLNIHIRNPTMGKLTSMHFYGWKRGLKTGMYYLRTQAAAAAIQFTVDQA 758
>gi|406863487|gb|EKD16534.1| ribonucleotide reductase large subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 902
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/772 (66%), Positives = 616/772 (79%), Gaps = 18/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDAEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N R+ +P+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSTVISDLYHYVNPRNKSASPMISQAT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +MK+ A L+S I+YDRDF+Y YFGFKTLERSYLL++ GK+ ERPQHM+MRV++GIH
Sbjct: 121 YECVMKHEAELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGKIAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAI+TY++MS ++FTHASPTLF AGTP+ QLSSCFL+ MK+DSI+GIY+TLK CA+
Sbjct: 181 NDIESAIETYNLMSSKYFTHASPTLFAAGTPQAQLSSCFLIDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNVHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EGK +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGEEFEALYEQYEKEGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY +P E AVCNLAS+ALP +V ++ GS +
Sbjct: 421 GTIRSSNLCTEIVEYCAPDEVAVCNLASLALPTYV-----------DQVSGS-------Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL EV +V +NLNKIID+NYYPV AR+SN RHRPI +GVQGLAD F+ L + FES
Sbjct: 463 NFQKLHEVCQVVVKNLNKIIDINYYPVPEARKSNFRHRPIAVGVQGLADVFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S E+A G YETY SP SKG LQ DMWNV P+D WDW
Sbjct: 523 PEAKQLNLQIFETIYHAALTGSVELAKLHGTYETYEGSPASKGELQYDMWNVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKQQIKQHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GSVQ IP IP ++K +YKTVWEI Q T+V MA DRG Y
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAY 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS+NIHM P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD
Sbjct: 703 IDQSQSMNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVD 754
>gi|46121591|ref|XP_385350.1| hypothetical protein FG05174.1 [Gibberella zeae PH-1]
Length = 913
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/795 (64%), Positives = 621/795 (78%), Gaps = 36/795 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDEL- 59
M+V KRDGRQE V FDKITAR+ +L YGL H DPV ++QKV +GVY GVTT QLD+L
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTIQLDDLV 60
Query: 60 -----------------AAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMY 102
AAETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y
Sbjct: 61 SGVCTMTVVTSANPILQAAETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLY 120
Query: 103 NHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK 162
+ N ++ +P+I+ + YE +M++ LDS I+YDRDF+Y+YFGF+TL RSYLL++ GK
Sbjct: 121 HWVNPKNDRASPMISKETYECVMRHKEELDSAIVYDRDFNYNYFGFRTLSRSYLLQIDGK 180
Query: 163 VVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVC 222
+ ERPQHM+MRV++GI DDI+ ++TY++MS ++FTHASPTLFNAGTP+PQLSSCFLV
Sbjct: 181 IAERPQHMIMRVAVGIWGDDIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVD 240
Query: 223 MKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDT 282
MK+DSI+GIY+TLK CA+ISK AGGIG++ H IRATGSYI GTNGTSNGIVPMLRVFN+T
Sbjct: 241 MKEDSIDGIYDTLKTCAMISKMAGGIGLNAHRIRATGSYIAGTNGTSNGIVPMLRVFNNT 300
Query: 283 ARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERV 342
ARYVDQGG KR GAFA+YLEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV
Sbjct: 301 ARYVDQGGNKRPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRV 360
Query: 343 QTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGT 402
+ NG+W+L CPNE GLADC+G EFE LY YEREGK +K ++AQ LW+ IL +Q ETG
Sbjct: 361 ERNGEWTLMCPNECPGLADCYGDEFEALYEKYEREGKGRKSIKAQKLWYAILEAQTETGN 420
Query: 403 PYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPV 462
P+ML+KD CNRKSNQ+NLGTI+SSNLCTEIIEY +P E AVCNLAS++LP F+ +D
Sbjct: 421 PFMLYKDHCNRKSNQKNLGTIRSSNLCTEIIEYCAPDEVAVCNLASLSLPSFINYEDA-- 478
Query: 463 ESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
+DF+KL EVT +V NLNKIIDVN+YPV+ AR SN+RHRPIG+
Sbjct: 479 ----------------CYDFKKLHEVTQVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGL 522
Query: 523 GVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSK 582
GVQGLAD F+ L M FESPEA++LNK IFETIY+ AL TS ++A +EGPY T+ SP S+
Sbjct: 523 GVQGLADAFLALRMPFESPEARELNKQIFETIYHAALTTSVQLAKEEGPYSTFKGSPASE 582
Query: 583 GILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
GILQ DMWNV PSD WDW LR+ + +G+RNSLLVAPMPTASTSQILGNNECFEPYTSN
Sbjct: 583 GILQFDMWNVKPSDLWDWEPLREDVKTHGIRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTV 702
IY RRVL+GEF VVN LL DL +MG+WS +KN+II D+GS+Q IP IP E+K +YKTV
Sbjct: 643 IYQRRVLAGEFQVVNPWLLKDLVDMGLWSDAMKNRIIADNGSIQNIPNIPAEIKALYKTV 702
Query: 703 WEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRA 762
WEI Q +V MA DRG +IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++A
Sbjct: 703 WEISQRQVVQMAADRGAFIDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQA 762
Query: 763 AADAIKFTVDTSVFK 777
AA I+FTVD K
Sbjct: 763 AAAPIQFTVDQENLK 777
>gi|260947674|ref|XP_002618134.1| hypothetical protein CLUG_01593 [Clavispora lusitaniae ATCC 42720]
gi|238848006|gb|EEQ37470.1| hypothetical protein CLUG_01593 [Clavispora lusitaniae ATCC 42720]
Length = 858
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/772 (65%), Positives = 633/772 (81%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDG +E V FDKITAR+++L YGL ++H D V V+Q+V +GVY GVTT +LD LA
Sbjct: 1 MFVIKRDGHKEPVRFDKITARIQRLCYGLDSDHVDAVAVTQRVISGVYHGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K FS+ K +Y + N ++ L +P+I+++
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVAKILYEYINPKTDLHSPMISEET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II +NA L+S I+YDRDF+Y+YFGFKTLERSYLL+V GKV ERPQH++MRV++GIH
Sbjct: 121 YKIICENADELNSAIVYDRDFNYNYFGFKTLERSYLLRVNGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ I+TY++MSQR+FTH SPTLFNAGTP PQ+SSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 181 NDIERVIETYNLMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GLA
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YEREG+ + V+AQ LW+ IL +Q ETGTP+ML+KD CN+K+NQ+NL
Sbjct: 361 DVYGDEFEALYEKYEREGRGRSTVKAQKLWYSILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP E AVCNLASIALP FV EKD + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFV-EKD---------------ASSSWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL EVT +VT NLN+IID N+YPVE ARRSN+R+RPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFDKLHEVTKVVTRNLNRIIDRNFYPVEEARRSNMRNRPIALGVQGLADAFMSLRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A +EGPYETY SP SKG+LQ D+W+ PS+ WDW
Sbjct: 525 QEAKELNIQIFETIYHAAVEASIELAQEEGPYETYEGSPASKGLLQYDLWDRKPSELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN H+
Sbjct: 585 DTLKQNLAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPHM 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ +KN II ++GS+Q +P +P+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LKDLVDLGIWNDNMKNNIIANNGSIQSLPNVPDEIKRLYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIH+ +P K+TS+HF W +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 705 IDQSQSLNIHIREPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|116283230|gb|AAH03299.1| Rrm1 protein [Mus musculus]
Length = 762
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/772 (67%), Positives = 628/772 (81%), Gaps = 19/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+M N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S E+A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 753
>gi|336275156|ref|XP_003352331.1| heterokaryon incompatibility protein [Sordaria macrospora k-hell]
gi|380088434|emb|CCC13588.1| putative heterokaryon incompatibility protein [Sordaria macrospora
k-hell]
Length = 937
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/777 (66%), Positives = 617/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S I ++YN+ N ++G +P+IA D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVINELYNYVNPKTGKHSPMIAKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MS + FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+R++ NG W+L CP+E GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRIEQNGTWTLMCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EGK +K V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+AL FV +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALAAFV------------------DYENASY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLNKIIDVN+YPV A SN+RHRPIG+GVQGLAD F+ L M F+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNHYPVMEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL S ++A ++G Y TY SPVS+GILQ DMWNV PS+ WDW
Sbjct: 523 PEARKLNIQIFETIYHAALTASCQLAKEQGTYSTYEGSPVSQGILQYDMWNVTPSNLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 AALKADIKKHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL EMG+WS +KN+II + GS+Q I IP+++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDNMKNRIIAEGGSIQNIASIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD K
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEALK 759
>gi|219110871|ref|XP_002177187.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411722|gb|EEC51650.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 814
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/826 (62%), Positives = 647/826 (78%), Gaps = 29/826 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KR+GR+E+VHFDKIT+R+ KL YGL +H DPV++SQKV GVY GVTTS+LDELA
Sbjct: 3 MYVLKRNGRRESVHFDKITSRVSKLCYGLDAKHVDPVIISQKVIQGVYPGVTTSELDELA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+TAA+ T HPDY+ LAAR++VSNLHK T FS+ ++ YN+ + ++G A LI++++
Sbjct: 63 AQTAASFATQHPDYSILAARVSVSNLHKMTIARFSDLVEVFYNYKHPKTGEPASLISEEV 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+ K+ LD I++ RDF+YDYFGFKTLE+SYLLKV GK+ ERPQ MLMRVS+GIH
Sbjct: 123 YQIVQKHKDELDGAIVHARDFEYDYFGFKTLEKSYLLKVDGKIAERPQLMLMRVSVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI I+TY+ +S+R+FTHA+PTLFNAGT PQ+SSCFL+ MK+DSI+GIY+TLK CAV
Sbjct: 183 DDIPRVIETYNFLSERYFTHATPTLFNAGTNMPQMSSCFLMTMKEDSIDGIYDTLKNCAV 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++HN+RA+ SYIRGTNG+SNGIVPMLRVFN+TARYVDQGGGKRKG+ A+Y
Sbjct: 243 ISKYAGGIGLAIHNVRASQSYIRGTNGSSNGIVPMLRVFNNTARYVDQGGGKRKGSIAIY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHG E RARDLF+A+WVPDLFM+RV+ NG WSL CPNE GLA
Sbjct: 303 LEPWHADVFAFLDLRKNHGNESDRARDLFFAMWVPDLFMKRVKDNGTWSLLCPNECPGLA 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREGK ++ ++AQ LWF IL SQ+ETGTPYMLFKD CNRKSNQQNL
Sbjct: 363 DCFGDEFEALYERYEREGKVRQTIKAQQLWFAILDSQVETGTPYMLFKDHCNRKSNQQNL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYT+P E AVCNLASI+L + V VP + G GS F
Sbjct: 423 GTIKCSNLCTEIVEYTAPDEAAVCNLASISLSKLV----VPGQ------YGQGGS----F 468
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL EV+ +VT+NLN+IID N+YP+E ARRSN+RHRPIGIGVQGLAD F +L + F+S
Sbjct: 469 DFEKLREVSGVVTKNLNRIIDRNFYPIEEARRSNMRHRPIGIGVQGLADCFQMLRIPFDS 528
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN DIFETIY+ A S ++AA +G YE+Y SP SKG LQ D+WNV PS+RWDW
Sbjct: 529 PEARKLNTDIFETIYFGACTASCDLAAVDGHYESYPGSPSSKGQLQFDLWNVQPSNRWDW 588
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++G+RNSLLVAPMPTAST+QILGNNE EP+TSN+Y+RRVL+GEF VVNKHL
Sbjct: 589 ASLKAKIAEHGIRNSLLVAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKHL 648
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L +LT GIW+ ++N+II ++GS+Q +PEIP E++ I+KTVWEI Q ++DMA DR Y
Sbjct: 649 LRELTARGIWTENVRNRIIAENGSIQNVPEIPVEIREIFKTVWEIPQRAILDMAADRAPY 708
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLN+H+ PN KK+TS+HF W +GLKTGMYYLR+R ADAIKFTVD
Sbjct: 709 ICQSQSLNVHIADPNSKKLTSMHFYAWQKGLKTGMYYLRTRPKADAIKFTVDQEQLVSNK 768
Query: 781 EKPELVVDDETKMAQVVC------------SLTNREE---CMACGS 811
K +VD E V LT +E C++CG+
Sbjct: 769 MKEVKLVDKENSSNMVTPPPPGATAMKGTQGLTTEDEEDMCLSCGA 814
>gi|340522103|gb|EGR52336.1| large subunit of ribonucleoside-diphosphate reductase [Trichoderma
reesei QM6a]
Length = 931
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/781 (65%), Positives = 620/781 (79%), Gaps = 25/781 (3%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDEL---- 59
++ DGRQE V FDKITAR+ +L YGL TEH DPV ++QKV +GVY GVTT QLD+L
Sbjct: 26 LRLDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTVQLDDLVSLH 85
Query: 60 ---AAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLI 116
AAETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++ +P+I
Sbjct: 86 ELVAAETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNNRASPMI 145
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D YE +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++
Sbjct: 146 SKDTYECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAV 205
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
GI DDI+ ++TYH+MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK
Sbjct: 206 GIWGDDIERVLETYHLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLK 265
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
CA+ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GA
Sbjct: 266 TCAMISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGA 325
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
FA+YLEPWHAD+F+FL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ N W+L CPNE
Sbjct: 326 FAIYLEPWHADVFDFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNLDWTLMCPNEC 385
Query: 357 SGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSN 416
GLADC+G EFE LY YEREG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSN
Sbjct: 386 PGLADCYGEEFEALYEKYEREGRGRKTIRAQKLWYSILEAQTETGNPFMLYKDHCNRKSN 445
Query: 417 QQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSK 476
Q+NLGTI+SSNLCTEIIEY +P E AVCNLAS+ALP FV +
Sbjct: 446 QKNLGTIRSSNLCTEIIEYCAPDEVAVCNLASLALPAFVDYNE----------------- 488
Query: 477 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+DF+KL EVT +V NLN+IIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L +
Sbjct: 489 -GCYDFKKLHEVTKVVVRNLNRIIDVNHYPVQEARNSNMRHRPIGVGVQGLADAFLALRL 547
Query: 537 AFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD 596
FESPEA++LNK IFETIY+ AL+ S EIA EGPYE++ SP S+GILQ DMW+V PSD
Sbjct: 548 PFESPEARELNKQIFETIYHAALEASMEIAKVEGPYESFKGSPASEGILQYDMWDVKPSD 607
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
W+W L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VV
Sbjct: 608 LWEWDSLKEQIKEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVV 667
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
N LL DL + G+WS +KN+II ++GS+Q IP IPE++K +YKTVWEI Q +V MA D
Sbjct: 668 NPWLLKDLVDTGLWSDAMKNRIIAENGSIQNIPNIPEDIKALYKTVWEISQRQIVQMAAD 727
Query: 717 RGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
RG +IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+FTVD
Sbjct: 728 RGAFIDQSQSLNIHMKDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAAPIQFTVDQQAL 787
Query: 777 K 777
K
Sbjct: 788 K 788
>gi|410972848|ref|XP_003992868.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase large subunit [Felis catus]
Length = 790
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/811 (65%), Positives = 647/811 (79%), Gaps = 21/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH+
Sbjct: 121 LDIVXANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHE 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNA +P S+CFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAELFQP--SNCFLLSMKDDSIEGIYDTLKQCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 239 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 299 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 359 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 419 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 460 DFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNVIP+D WDW
Sbjct: 520 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVIPTDLWDW 579
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 580 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 639
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 640 LKDLTERGLWNEEMKNQIIACNGSIQNIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 700 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 759
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NREEC+ CGS
Sbjct: 760 KATKEEEEKERNTAAMVCSLENREECLMCGS 790
>gi|452842681|gb|EME44617.1| hypothetical protein DOTSEDRAFT_152571 [Dothistroma septosporum
NZE10]
Length = 916
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/777 (65%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++ KV AGVY GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITMKVIAGVYHGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS ++D+Y + N ++G KAP+I+++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSAVVQDLYAYINPKTGKKAPMISEET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +MK++ L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRV++GIH
Sbjct: 121 YATVMKHSDELNSAIVYDRDFNYQYFGFKTLERSYLLRIDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TY+ MS ++FTHASPTLF+AGTP+ QL+SCFLV MKDDSI+GIY+TLK CA+
Sbjct: 181 EDIEAAIETYNYMSLKYFTHASPTLFSAGTPQAQLASCFLVAMKDDSIDGIYDTLKICAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ VHNIRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLHVHNIRATGSYIGGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ +F++L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE GL+
Sbjct: 301 LEPWHADVMQFMDLRKNHGKEEVRARDLFYALWIPDLFMQRVEQNGTWTLMCPNECPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF++LY YEREGK ++ V+AQ +W+ IL +Q ETGTP++L+KD NRKSNQ+NL
Sbjct: 361 DVYGDEFKELYERYEREGKGRETVRAQKIWYAILEAQTETGTPFILYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EY++P E AVCNLAS+ALP +V D+ +N F
Sbjct: 421 GTIKSSNLCTEIMEYSAPDEVAVCNLASLALPTYV---DI---------------ENEVF 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +VT NLNK I++NYYPV AR+SN RHRPIG+GV GLAD F+ L M F+S
Sbjct: 463 DFKKLHEVTKVVTRNLNKTIEINYYPVPEARKSNFRHRPIGLGVNGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL+ S E+A K GPYETY SPVS+G LQ DMW P+D WDW
Sbjct: 523 PEAKELNIQIFETIYHAALEASCELAEKLGPYETYPGSPVSQGELQYDMWGKTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AALKGKIAQHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + G+WS +KN+II D+GS+Q+IP IP++LK +YKTVWEI Q +V MA DRG +
Sbjct: 643 LKDLVDRGLWSENMKNRIIADNGSIQRIPNIPDDLKALYKTVWEISQRNIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AA+ I+FTVD + K
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTQAASAPIQFTVDQEMLK 759
>gi|320582719|gb|EFW96936.1| Ribonucleoside-diphosphate reductase large chain 1 [Ogataea
parapolymorpha DL-1]
Length = 862
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/772 (64%), Positives = 631/772 (81%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ +L YGL EH +PV ++Q+V +GVY GVTT +LD LA
Sbjct: 1 MYVLKRDGRKEPVRFDKITARVSRLCYGLDPEHVEPVAITQRVISGVYHGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA+LAARIA+SNLHK T K FS+ + +Y++ N ++G +P+I+D+
Sbjct: 61 AETAAYMTTIHPDYATLAARIAISNLHKQTTKQFSQVVDQLYHYINPKNGKPSPMISDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ ++A L+S I+YDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHM+MRV+IGIH
Sbjct: 121 YRIVQEHADELNSAIVYDRDFSYNYFGFKTLERSYLLKIDGKVAERPQHMVMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI S I+TY++MSQ++FTHASPTLFNAGTP PQ+SSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 181 DDIPSVIETYNLMSQKFFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKAAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIF+F++++KNHGKEE RARDLF ALW+PDLFMERV+ N +W+LF P+EA GLA
Sbjct: 301 VEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMERVEQNAEWTLFSPSEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF++LYT YE+EG+ ++ V+AQ LW+ IL +Q ETGTP+ML+KD CN K+NQ+NL
Sbjct: 361 DVYGDEFKELYTRYEKEGRGRQTVKAQKLWYAILEAQTETGTPFMLYKDACNSKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP E AVCNLASIALP FV D ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPAFVESDD----------------NTSWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL ++T +VT+NLNKIID NYYPV ARRSN+R+RPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFEKLHQITKVVTKNLNKIIDRNYYPVPEARRSNMRNRPIAVGVQGLADVFMQLRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL+ S+E+A ++G YET+ SP S+GILQ D+W P+D WDW
Sbjct: 525 PEARELNIQIFETIYHGALEASAELAVRDGKYETFEGSPASQGILQFDLWGKKPTDLWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DSLKARIQKDGLRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +G+W+ ++KN II D+GSVQ +P +P+ELK +Y+TVWEI Q +++DMA DRG Y
Sbjct: 645 LRDLVNLGLWNDSMKNFIIKDNGSVQNLPNVPQELKDLYRTVWEIPQKSIIDMAADRGAY 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS+NIH+ P K+TS+HF W +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 705 IDQSQSMNIHLKNPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|325190738|emb|CCA25231.1| ribonucleosidediphosphate reductase large subunit p [Albugo
laibachii Nc14]
Length = 782
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/814 (63%), Positives = 638/814 (78%), Gaps = 35/814 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ KL Y L+TE+ DPV +SQKV AGVY GVTTS+LDELA
Sbjct: 1 MYVIKRDGRKEVVKFDKITARITKLCYNLNTEYVDPVQISQKVIAGVYPGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +T HPD++ LAARIA+SNLHKNT K FSE I+ Y + ++ + + APLIA+D+
Sbjct: 61 AETAAYCSTQHPDFSKLAARIAISNLHKNTNKVFSENIQLFYENKHDTTKVPAPLIAEDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +++KN L+S II DRDFDYDYFGFKTLE+SYLL+V GKV ERPQHM+MRV++GIHK
Sbjct: 121 YRVVIKNKEALNSAIIGDRDFDYDYFGFKTLEKSYLLRVNGKVCERPQHMIMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+++++ ++TY MSQ++FTHA+PTLFNAGTPRPQLSSCFL+ M+DDSI+GIY+TLK+CA
Sbjct: 181 ENLEAVLETYECMSQKFFTHATPTLFNAGTPRPQLSSCFLLSMQDDSIDGIYDTLKQCAC 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIGVS+ NIR T SYIRGTNG+SNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKWAGGIGVSISNIRCTNSYIRGTNGSSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL L+KNHG E HRARDLFYALW+PDLFM+RV+ N +WSLFCPNEA L
Sbjct: 301 LEPWHADIFEFLELRKNHGNELHRARDLFYALWIPDLFMKRVEDNQEWSLFCPNEAPRLY 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EF+ LY YE A+K V+AQ LWF IL SQIETGTPYML+KD CNRKSNQQNL
Sbjct: 361 ETWGNEFDALYLKYESMNIARKTVKAQQLWFAILDSQIETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLC EIIEY+ E AVCNLAS+AL +FV +K+ F
Sbjct: 421 GTIRSSNLCCEIIEYSDSKEVAVCNLASVALSKFVYQKE--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
F KL E+T IVT+NLNKIID+NYYP+ A+ SN RHRPIGIGVQGLADTF+L+G+ FES
Sbjct: 461 QFTKLYEITKIVTKNLNKIIDINYYPIPEAQSSNQRHRPIGIGVQGLADTFLLMGLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
A+ LNK+IFET+Y+ A++ S E+A + GPYE+Y SPVSKG Q DMW V P S RWD
Sbjct: 521 KAARDLNKEIFETMYFAAMEASMELARELGPYESYSGSPVSKGTFQFDMWQVTPDSGRWD 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ ++ +G+RNSLL+APMPTAST+QILGN E EP+TSN+++RRVL+GEF +VNK+
Sbjct: 581 WKSLKEQVAAHGIRNSLLLAPMPTASTAQILGNCESIEPFTSNMFNRRVLAGEFTIVNKY 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ +L EM +W+ ++N+I+ D GSVQ I EIP +K YKTVWEIKQ +++DMA DRG
Sbjct: 641 LMEELIEMNLWTSDVRNQILRDRGSVQNIVEIPPNVKEKYKTVWEIKQKSILDMAADRGA 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQSLNIH+ P K+TS+HF W +GLKTGMYYLR+R ADAI+FTVD
Sbjct: 701 YICQSQSLNIHIADPTVSKLTSMHFYAWKKGLKTGMYYLRTRPRADAIQFTVDQKSL--- 757
Query: 780 PEKPELVVDDETKMAQV--VCSLTNREECMACGS 811
D++ +A++ + EEC+ CG+
Sbjct: 758 ---------DDSALAKLSQTQDVDEEEECLVCGA 782
>gi|431919136|gb|ELK17888.1| Ribonucleoside-diphosphate reductase large subunit [Pteropus
alecto]
Length = 799
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/808 (65%), Positives = 646/808 (79%), Gaps = 26/808 (3%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
+GRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LAAETAA
Sbjct: 15 NGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAAT 74
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
+TT HPDYA LAAR+AVSNLHK TKK FS+ ++D+YN+ N + +P++A +I++
Sbjct: 75 LTTKHPDYAILAARVAVSNLHKETKKVFSDVMEDLYNYINPHNSKHSPMVAKSTLDIVLA 134
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH++DI++A
Sbjct: 135 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHEEDIEAA 194
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+ISKSAG
Sbjct: 195 IETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAG 254
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH
Sbjct: 255 GIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHL 314
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN +WSL CPNE GL + WG E
Sbjct: 315 DIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQEWSLMCPNECPGLDEVWGEE 374
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNR+SNQQNLGTIK S
Sbjct: 375 FEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRQSNQQNLGTIKCS 434
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEI+EYTS E AVCNLAS+AL +V + +DF+KLA
Sbjct: 435 NLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTYDFKKLA 475
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
EVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FESPEAQ L
Sbjct: 476 EVTKVIVRNLNKIIDINYYPIPEAYLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLL 535
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
NK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW +L++
Sbjct: 536 NKQIFETIYYGALEASCDLAKEHGPYETYKGSPVSKGILQYDMWNVTPTDLWDWKLLKEK 595
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE
Sbjct: 596 IAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTE 655
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MAV+RG +IDQSQS
Sbjct: 656 RGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAVERGAFIDQSQS 715
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK---PEKP 783
LNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ KEK EK
Sbjct: 716 LNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN----KEKLKDKEKA 771
Query: 784 ELVVDDETKMAQVVCSLTNREECMACGS 811
+ E A +VCSL NR+EC+ CGS
Sbjct: 772 SKEEEKERNTAAMVCSLENRDECLMCGS 799
>gi|158299261|ref|XP_554103.3| AGAP010198-PA [Anopheles gambiae str. PEST]
gi|157014280|gb|EAL39294.3| AGAP010198-PA [Anopheles gambiae str. PEST]
Length = 809
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/819 (63%), Positives = 650/819 (79%), Gaps = 27/819 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E VH DKIT+R++KL YGL+ + DPV ++ +V G+Y GVTT +LD LA
Sbjct: 10 MYVFKRDGRKEEVHLDKITSRIQKLCYGLNMDFVDPVAITLRVINGLYSGVTTQELDNLA 69
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT+H DYA LAAR+AVSNLHK TKK FSE + D+Y NE K+P+I+D
Sbjct: 70 AETAATLTTDHADYAILAARLAVSNLHKETKKQFSEVMHDLYMMENEFLKTKSPMISDFH 129
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++IM NA L+S IIYDRDF Y+YFGFKTLERSYLLK++GK+VERPQHMLMRV+IGIH
Sbjct: 130 YKVIMDNADRLNSAIIYDRDFGYNYFGFKTLERSYLLKIKGKIVERPQHMLMRVAIGIHG 189
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+R+FTHASPT+F A T RPQLSSCFL+ M +DSIEGIY+TLK+CA+
Sbjct: 190 EDIDAAIETYNLLSERYFTHASPTMFAAATQRPQLSSCFLLTMSEDSIEGIYDTLKQCAL 249
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+YI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 250 ISKSAGGIGLNVHCIRAKGTYISGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 309
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARD+FYALW+PDLFM+RV+ N WSL CP++ GL+
Sbjct: 310 LEPWHGDIFEFLDLKKNTGKEEVRARDMFYALWIPDLFMQRVEANEMWSLMCPHDCPGLS 369
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLYT YE+EG+ + V+AQ+LWF I+ SQ+ETG PYML+KD CNRKSNQQN+
Sbjct: 370 DTWGEEFEKLYTGYEKEGRFIRQVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNI 429
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+S E AVCNLASIAL FV++ ++ +
Sbjct: 430 GTIKCSNLCTEIVEYSSKDEVAVCNLASIALNMFVKQ-------------------DKTY 470
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV VT NLNKIIDVNYYPV A+RSN+RHRPIGIGVQG+AD FIL+ +ES
Sbjct: 471 DFAKLKEVAKTVTRNLNKIIDVNYYPVPEAKRSNMRHRPIGIGVQGMADAFILMRYPYES 530
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN+ IFETIYY AL+ S E+AA++GPYETY SPVSKGILQ +MWN P+D W+W
Sbjct: 531 EEAQKLNQQIFETIYYGALEASCELAARDGPYETYEGSPVSKGILQYEMWNKEPTDLWNW 590
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+G+RNSLL+APMPTAST+QILGNNE FEPYTSN+Y+RRVLSGEF VVN HL
Sbjct: 591 AELKEKIAKHGIRNSLLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQVVNHHL 650
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT MG+W +KN+I+ ++GS+QKI IP+E++ +YKTVWEI T + MA DRG +
Sbjct: 651 LQDLTNMGLWDLDMKNEILSNNGSIQKIAAIPQEIRDLYKTVWEISVKTCIKMAADRGAF 710
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS NIH+ +PN+ K+TS+HF W GLKTGMYYLR++ A +AI+FTVD + +
Sbjct: 711 IDQSQSFNIHVAEPNYGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKTKLQNGN 770
Query: 781 EKPELVVDDET--------KMAQVVCSLTNREECMACGS 811
E + +E +MA++VCSL N++ECM CGS
Sbjct: 771 ESNVSRMSNENGSFAERNRRMAEMVCSLENKDECMMCGS 809
>gi|315056831|ref|XP_003177790.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
gypseum CBS 118893]
gi|311339636|gb|EFQ98838.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
gypseum CBS 118893]
Length = 870
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/771 (66%), Positives = 616/771 (79%), Gaps = 18/771 (2%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGR+E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++G AP+I++ EI+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRV++GIH +D++
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEA GLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FE LY YE++G+ + ++AQ LW+ IL +Q ETG P+ML+KD+CNRKSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKDGRGRSTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEI+EYT+P E AVCNLASIALP FV RG +DF KL
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFVD--------------AVRGE----YDFGKLH 465
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L + F+SPEA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
N IFET+Y+ AL S E+A +GPY +Y SPVS+GILQ DMWNV P+D WDW L+
Sbjct: 526 NIQIFETLYHAALTASCELAKADGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDSLKSD 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
+G+WS +KN+II D GS+Q +P IP ++K +YKTVWEI Q T+V MA DRG +IDQSQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNVPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
LNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 756
>gi|367034670|ref|XP_003666617.1| hypothetical protein MYCTH_2311451 [Myceliophthora thermophila ATCC
42464]
gi|347013890|gb|AEO61372.1| hypothetical protein MYCTH_2311451 [Myceliophthora thermophila ATCC
42464]
Length = 911
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGRQE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK +S + D+Y++ N ++G +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNGKPSPMIAKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV++GI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DNVERVIETYNLMSNKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YEREG+ ++ V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYERYEREGRGRRTVRAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP+FV + +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFVDYNE------------------GVY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V NLN+IID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L M FES
Sbjct: 463 DFKKLHEVTQVVVRNLNRIIDINHYPVKEAYNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNK IFETIY+ AL S ++A ++GPY TY SPVS+GILQ DMWNV PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCDLAKEQGPYSTYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKAKIKEHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II + GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR++AAA I+FTVD +
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|370988472|dbj|BAL43552.1| ribonucleotide reductase M1 [Xenopus laevis]
Length = 797
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/820 (64%), Positives = 648/820 (79%), Gaps = 32/820 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYSGVTTIELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAAR+AVSNLHK TKK+FS+ ++D+YN+ N + +P+++ +
Sbjct: 61 AETAATLTTKHPDYAILAARVAVSNLHKETKKTFSDVMEDLYNYVNPLNSKHSPMVSKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+CMKDDSIEGIY+TLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL+LKKN GKEE RARDLFYA+W+PDLFM+RV+ N WSL CP+E GL
Sbjct: 301 LEPWHYDVFDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLE 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG +FE+LY YEREG+ +KVV+AQ +W I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 EVWGDKFEELYEKYEREGRTRKVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SN CTEI+EYTS E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNQCTEIVEYTSDKEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA+VT ++ NLNKII++N+YPV A SN +HRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+AQ LNK IFETIYY AL++S E+A + GPYETY PVSKGILQ DMWNV P+D WDW
Sbjct: 522 EKAQMLNKQIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 TALKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DLTE G+W+ +KN+II ++GS+Q +P+IP +LK +YKTVWEI Q T++ MA DRG +
Sbjct: 642 MKDLTEQGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ KEK
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEK- 760
Query: 781 EKPELVV---------DDETKMAQVVCSLTNREECMACGS 811
EL+ + E A +VCSL NR+EC+ CGS
Sbjct: 761 ---ELITMETTEKDKEEKEKNKAAMVCSLENRDECLMCGS 797
>gi|339251084|ref|XP_003373025.1| ribonucleoside-diphosphate reductase large subunit [Trichinella
spiralis]
gi|316969123|gb|EFV53282.1| ribonucleoside-diphosphate reductase large subunit [Trichinella
spiralis]
Length = 833
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/825 (63%), Positives = 636/825 (77%), Gaps = 39/825 (4%)
Query: 8 GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAM 67
GR+EAVHFDKIT+R+KKL YGL+ EH +P+L+SQKV AG+Y+GVTT +LD LAAE +A M
Sbjct: 27 GRREAVHFDKITSRIKKLCYGLNMEHIEPILISQKVIAGLYQGVTTVELDNLAAEISATM 86
Query: 68 TTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN 127
TT HPDYA+LAARIAVSNLHK TKK FS+ I D+Y N + +P+I+ +++II N
Sbjct: 87 TTKHPDYATLAARIAVSNLHKETKKVFSDVIDDLYQWINPNTNKHSPMISPKVHQIIQAN 146
Query: 128 AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAI 187
+ L+S I+YDRDF Y YFGFKTLE+SYLLK+ GKV ERPQH+LMRV+IGIH+DDID+AI
Sbjct: 147 SQRLNSTIVYDRDFSYSYFGFKTLEKSYLLKINGKVAERPQHLLMRVAIGIHEDDIDAAI 206
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
+TY++MS++WFTHASPTLFNAGT RPQLSSCFL+ MK DSIEGIY+TLKECA+ISKSAGG
Sbjct: 207 ETYNLMSEKWFTHASPTLFNAGTCRPQLSSCFLITMKSDSIEGIYDTLKECAIISKSAGG 266
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++VH IRA+G+YI GTNG SNG++PMLRVFN+TARYVDQGG KR GAFAVYLEPWHAD
Sbjct: 267 IGLNVHCIRASGTYIAGTNGYSNGLLPMLRVFNNTARYVDQGGNKRPGAFAVYLEPWHAD 326
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
IF+FL+ KKN G EE+RARDLFYALW+PDLFM+R++ +G WSL CP+E GLAD WG EF
Sbjct: 327 IFDFLDAKKNTGVEENRARDLFYALWIPDLFMKRIEADGDWSLMCPHECPGLADLWGDEF 386
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSN 427
EKLY YE +GK K+ ++AQ LW+ I+ SQIETGTP+M++KD CNRKSNQQNLGTIK SN
Sbjct: 387 EKLYEKYEAQGKHKRRIKAQQLWYAIIESQIETGTPFMVYKDACNRKSNQQNLGTIKCSN 446
Query: 428 LCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAE 487
LCTEI++Y+SP ET+VCNLASIAL +FV R FDF KLAE
Sbjct: 447 LCTEIVQYSSPDETSVCNLASIALNKFV------------------NVAKREFDFAKLAE 488
Query: 488 VTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLN 547
VT +VT NLNKIID NYYPV A +SN RHRPIGIGVQGLAD FIL+ FES EA+ LN
Sbjct: 489 VTKVVTVNLNKIIDRNYYPVAVAEKSNKRHRPIGIGVQGLADAFILMRYPFESEEARLLN 548
Query: 548 KDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMI 607
K IFETIYY AL++S ++A + GPYETY SP SKGILQ DMWNV P+D WDW L+ I
Sbjct: 549 KKIFETIYYAALESSCDLAKQFGPYETYQGSPASKGILQYDMWNVQPTDLWDWESLKCRI 608
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
K G+RNSLL+APMPTAST+QILGNNE E YTSN+Y+RRVLSGEF +VN HL+ DL E+
Sbjct: 609 EKYGLRNSLLLAPMPTASTAQILGNNESVEAYTSNVYTRRVLSGEFQIVNHHLMKDLVEL 668
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W ++KN+II + GS+Q I IP E++ +YKTVWEI Q ++DMA +RG +IDQSQSL
Sbjct: 669 GLWDESLKNEIIANKGSIQSIESIPAEIRELYKTVWEISQKCVIDMAAERGAFIDQSQSL 728
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD--------------- 772
NIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ A AI+FTVD
Sbjct: 729 NIHIAEPNYAKLTSMHFYGWKKGLKTGMYYLRTKPAVTAIQFTVDKLALKQKKTKEEEEG 788
Query: 773 ---TSVFKEKPEKPELVVDDETKMAQVV---CSLTNREECMACGS 811
+ +K K D+ + + C L N ECM C S
Sbjct: 789 QRPNGGYVDKSRKFPTSGDNWSNNVNALLQQCRLENGNECMLCSS 833
>gi|145256649|ref|XP_001401473.1| ribonucleoside-diphosphate reductase large chain [Aspergillus niger
CBS 513.88]
gi|134058380|emb|CAK38565.1| unnamed protein product [Aspergillus niger]
gi|350632026|gb|EHA20394.1| hypothetical protein ASPNIDRAFT_57102 [Aspergillus niger ATCC 1015]
Length = 865
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/777 (65%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNQPAPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRV++GIH
Sbjct: 121 YEIIMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+ AI+TYH+MSQ++FTHASPTLFNAGTP+PQL+SCFLV MK+DSI+GIY+TLK CA+
Sbjct: 181 SDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IR+TGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE+EG+ ++ ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYEKYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+QLN IFETIY+ L SS++A + G YETY SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 AEARQLNIQIFETIYHAGLTASSDLAKEFGTYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II + GSVQ IP IP ++K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPSDIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|406672896|ref|ZP_11080121.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum CCUG 30536]
gi|405587440|gb|EKB61168.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum CCUG 30536]
Length = 777
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/811 (64%), Positives = 648/811 (79%), Gaps = 34/811 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G++EAVHFDKITAR+ KL YGLS D + +++KV G+Y VTT++LD LA
Sbjct: 1 MFVIKRNGKKEAVHFDKITARIHKLIYGLSISEKDVIEIAKKVIQGIYDNVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA TT HPD++ LAARIAVSNLHKNT KSFS+T + +Y + + + APLI+++I
Sbjct: 61 AETAAAQTTIHPDFSVLAARIAVSNLHKNTLKSFSKTAQLLYEYTDPITQTHAPLISEEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II KNA LDS +IYDRD+++DYFGFKTLERSYL++ GKV ERPQH+ MRV++GIHK
Sbjct: 121 YKIIRKNADELDSSLIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI+TY++MS++WF HA+PTLFNAGTP+PQ+SSCFL+ M +DSI GI++TLK CA+
Sbjct: 181 EDIQAAIETYNLMSEKWFIHATPTLFNAGTPKPQMSSCFLLSMTEDSIAGIFDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIGVS+HNIR+TGSYI+GT G SNGI+PMLRVFNDTARYVDQGGGKRKGA AVY
Sbjct: 241 ISQSAGGIGVSIHNIRSTGSYIKGTGGISNGIIPMLRVFNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+++KNHGKEE RARDLF ALW+PDLFM+RV+T+ WSLF PNEA GL
Sbjct: 301 IEPWHSDIFEFLDIRKNHGKEEMRARDLFPALWIPDLFMQRVETDQMWSLFDPNEAQGLY 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +F +LYT YE EGK +K ++A+ LW IL +QIETGTPYM +KD N KSNQ+N+
Sbjct: 361 DVYGEKFNELYTTYENEGKFRKQIKARELWTAILEAQIETGTPYMCYKDAVNEKSNQKNI 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+ E AVCNLAS+ALPR+V +K F
Sbjct: 421 GTIRSSNLCTEIMEYTNADEVAVCNLASLALPRYVSDKG--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT IVT NLNKIID NYYP+ + SN RHRPIG+GVQGLAD F+LL + FES
Sbjct: 461 DFQKLYEVTKIVTRNLNKIIDGNYYPIPQTKTSNDRHRPIGLGVQGLADVFLLLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A++LNKDIFETIY+ +++ S E+A ++G Y ++ SP+S+G Q D+W + PSDRWDW
Sbjct: 521 EAARKLNKDIFETIYFASMEASMELAKEQGAYSSFAGSPLSEGKFQFDLWQIAPSDRWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK L
Sbjct: 581 EKLRNEVMTHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKFL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+G+W+PT+KNK+I ++GSVQ IPEIP ELK +YKTVWEIKQ T++DMA +RG +
Sbjct: 641 LKDLIELGLWNPTMKNKLIAENGSVQNIPEIPTELKELYKTVWEIKQKTIIDMAAERGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLN+ M +PNF K+TS+HF W GLKTGMYYLR++AA DAIKFTVDT +
Sbjct: 701 ICQSQSLNLFMAEPNFAKLTSMHFHAWKSGLKTGMYYLRTKAAVDAIKFTVDTQIL---- 756
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ +Q CSL N EEC+ACGS
Sbjct: 757 ----------SGQSQAACSLDNPEECLACGS 777
>gi|148224574|ref|NP_001084312.1| ribonucleotide reductase M1 [Xenopus laevis]
gi|49256098|gb|AAH74185.1| RRM1 protein [Xenopus laevis]
Length = 797
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/820 (64%), Positives = 647/820 (78%), Gaps = 32/820 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYSGVTTIELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAAR+AVSNLHK TKK FS+ ++D+YN+ N + +P+++ +
Sbjct: 61 AETAATLTTKHPDYAILAARVAVSNLHKETKKIFSDVMEDLYNYVNPLNSKHSPMVSRET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+CMKDDSIEGIY+TLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL+LKKN GKEE RARDLFYA+W+PDLFM+R + N WSL CP+E GL
Sbjct: 301 LEPWHYDVFDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRAENNLDWSLMCPHECPGLE 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG +FE+LY YEREG+ +KVV+AQ +W I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 EVWGDKFEELYEKYEREGRTRKVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSDKEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA+VT ++ NLNKII++N+YPV A SN +HRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+AQ LNK IFETIYY AL++S E+A + GPYETY PVSKGILQ DMWNV P+D WDW
Sbjct: 522 EKAQMLNKQIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 TALKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DLTE G+W+ +KN+II ++GS+Q +P+IP +LK +YKTVWEI Q T++ MA DRG +
Sbjct: 642 MKDLTEQGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ KEK
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEK- 760
Query: 781 EKPELVV---------DDETKMAQVVCSLTNREECMACGS 811
EL+ + E A +VCSL NR+EC+ CGS
Sbjct: 761 ---ELITMETTEKDKEEKEKNKAAMVCSLENRDECLMCGS 797
>gi|390596008|gb|EIN05411.1| hypothetical protein PUNSTDRAFT_107092 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 855
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/793 (64%), Positives = 629/793 (79%), Gaps = 23/793 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KR GR+E V FDKIT R+ KL YGL T+H D V ++QKV +GVY GVTT +LD LAA
Sbjct: 3 YVFKRGGRKEIVQFDKITKRIAKLCYGLDTDHVDAVEIAQKVISGVYPGVTTIELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIAVSNLHK TK FSE +KD+Y + N ++G A LI+ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAVSNLHKETKNKFSEVVKDLYEYVNPKTGKPAGLISQETY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+I+M NAA LDS ++Y+RDF Y++FGFKTLERSYLLK+ G+ ERPQH+LMRV++GIH
Sbjct: 123 DIVMANAATLDSAVVYERDFQYNFFGFKTLERSYLLKLNGRPAERPQHLLMRVAVGIHGA 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI A++TY +MSQ++F H SPTLFNAGTPRPQLSSC+L+ M+DDSIEGIY+TLK CA+I
Sbjct: 183 DIKRAVQTYDLMSQKYFNHGSPTLFNAGTPRPQLSSCYLLAMQDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+ +HNIRATGSYI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLHIHNIRATGSYIAGTNGYSNGIVPMLRAFDSTARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADIFEF++L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG WSLFCPNEA GL +
Sbjct: 303 EPWHADIFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGDWSLFCPNEAPGLHE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EFE L+ YE+EG+AKK + AQ LW+ I+ +QIETG P+ML+KD CN KSNQQNLG
Sbjct: 363 VWGPEFEALFERYEKEGRAKKTIPAQKLWYAIMEAQIETGGPFMLYKDACNSKSNQQNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY+SP ETAVCNLAS+ALP FV D+ ++ +D
Sbjct: 423 TIKSSNLCTEIIEYSSPEETAVCNLASMALPSFV---DMSTKT---------------YD 464
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL EV +VT NLN++IDVN+YP+ +ARRSN+RHRP+G+GVQGLADTF++L M F+SP
Sbjct: 465 FKKLHEVAKVVTYNLNRVIDVNHYPIPSARRSNMRHRPVGLGVQGLADTFMMLRMPFDSP 524
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
A+QLNK IFET+Y+ AL+ SSEIA ++GPYET+ SP +G LQ D+W V P+D WDW
Sbjct: 525 AAKQLNKQIFETLYHAALEASSEIAERDGPYETWEGSPAQQGKLQYDLWGVTPTDLWDWK 584
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 585 SLKEKITRTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 644
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L E+ +W +KN II ++GS+Q I IP+++K IYKTVWE+ Q ++DMA DRG +I
Sbjct: 645 RELVELKLWDDQMKNMIIANNGSIQSIIGIPDDVKAIYKTVWELSQKVVLDMAADRGAFI 704
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA+AI+FTVD V + E
Sbjct: 705 CQSQSLNVHLQAPTMGQLTSMHFYGWRKGLKTGMYYLRTRPAANAIQFTVDQKVLQAAKE 764
Query: 782 -----KPELVVDD 789
KP+ V D
Sbjct: 765 GREKGKPKAEVSD 777
>gi|242765906|ref|XP_002341068.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724264|gb|EED23681.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 873
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/777 (65%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I+D+Y++ N ++ AP+I+ ++
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQFSAVIEDLYHYVNPKNNKAAPMISPEM 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YETVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++I+ AI+TY++MSQ++FTHASPTLFNAGTPRPQL+SCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 ENIEKAIETYNLMSQKYFTHASPTLFNAGTPRPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IR+TGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL+L+KNHGKEE RARDLFYALW PDLFM RV+ N W+LFCPNEA GLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMRRVEANQDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE+EG+ ++ V+AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEKEGRGRRTVKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY +P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFVDT--------------ARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIAVGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S E+A + G YETY SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHGALTASIELAKEYGTYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKAQIREHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II + GSVQ IP IP ++K +YKTVWEI Q +++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|194859786|ref|XP_001969450.1| GG23946 [Drosophila erecta]
gi|190661317|gb|EDV58509.1| GG23946 [Drosophila erecta]
Length = 812
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/820 (62%), Positives = 638/820 (77%), Gaps = 28/820 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGRQE VHFDKIT+R++KL Y L+ + DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +T HPDYA LAARIAVSNLHK TKK+FS+ +D+YNH N+ + K L+++
Sbjct: 72 AEIAAGLTCYHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVSLVSEFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ KNA L+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRV+IGIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKTNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+A++TY+++S+R+FTHASPTLF A T RPQLSSCFL+ M DSIEGI++++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL LKKN GKEE+RARDLFYALW+PDLFM+RV+ NG WSL CP++ GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLQ 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLY YE+EG+A + V+AQ+LW+ I+ +Q+ETG PYMLFKD CNRKSNQQN+
Sbjct: 372 DVWGDEFEKLYEKYEQEGRANRTVKAQSLWYAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY++P E AVCNLASIAL FV + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT IVT NLNKIID+NYYP+ AR+SNLRHRP+GIG+QG AD IL+ +ES
Sbjct: 473 DFKKLKEVTKIVTRNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ IFETIYY AL+ S E+A EGPYETY SPVSKGILQ DMW+ +P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIKKHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KN+II GS+Q I IP+ ++ +YKTVWEI + + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIEAIPQRVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQS NIH+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA+AI+FTV+ E
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKKGAEGI 772
Query: 779 -------KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ D E KMA +VCSL N++ CM+CGS
Sbjct: 773 NGQNGTSDESSKQFEEDRERKMADMVCSLENKDACMSCGS 812
>gi|425781620|gb|EKV19574.1| Ribonucleoside-diphosphate reductase [Penicillium digitatum PHI26]
gi|425782887|gb|EKV20768.1| Ribonucleoside-diphosphate reductase [Penicillium digitatum Pd1]
Length = 861
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/772 (66%), Positives = 617/772 (79%), Gaps = 18/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GV T +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVGTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSMVISDLYHYVNPKNNKPAPMISKQH 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK+A L+S I+YDRDF+Y+YFGFKTLERSYLL++ G V ERPQH+LMRV++GIH
Sbjct: 121 YEIVMKHAEELNSAIVYDRDFNYNYFGFKTLERSYLLRISGNVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TYH+MSQ++FTHASPTLFNA TP+PQL+SCFLV + DSIEGIY+TLK CA+
Sbjct: 181 EDIEKAIETYHLMSQKYFTHASPTLFNAATPQPQLASCFLVDVSADSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYISGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LYT YE+EG+ +K ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYTKYEQEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY++P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPTFVDS--------------ARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVVQVLVHNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL SS+IA K G YETY SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHGALTASSDIAKKLGTYETYPGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKAKIAETGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II D GSVQ IP IP ++K +YKTVWEI Q ++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRNILQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVD 754
>gi|327301679|ref|XP_003235532.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
rubrum CBS 118892]
gi|326462884|gb|EGD88337.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
rubrum CBS 118892]
Length = 870
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/771 (66%), Positives = 615/771 (79%), Gaps = 18/771 (2%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGR+E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++G AP+I++ EI+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRV++GIH +D++
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEA GLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FE LY YE+EG+ + ++AQ LW+ IL +Q ETG P+ML+KD+CNRKSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEI+EYT+P E AVCNLASIALP FV RG +DF KL
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFVD--------------AVRGE----YDFGKLH 465
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L + F+SPEA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
N IFET+Y+ AL S E+A +GPY +Y SPVS+GILQ DMWNV P+D WDW L+
Sbjct: 526 NTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDGLKAE 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
+G+WS +KN+II D GS+Q I IP ++K +YKTVWEI Q T+V MA DRG +IDQSQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNISNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
LNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 756
>gi|410915400|ref|XP_003971175.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 2 [Takifugu rubripes]
Length = 795
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/814 (64%), Positives = 642/814 (78%), Gaps = 22/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQEAV FDKIT R++KL YGL++E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQEAVSFDKITFRVQKLCYGLNSEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT +PDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPLNKQHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+++N L+S IIYDRDF Y++FGFKTLERSYLLK GKV ERPQHMLMRV++GIH+
Sbjct: 121 LDIVLENKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKTNGKVAERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++AI+TY+++S++WFTHASPTLFNAGT +PQLSSCFL+ M++DSIEGIY+TL +CA+
Sbjct: 181 ADIEAAIETYNLLSEKWFTHASPTLFNAGTRKPQLSSCFLLAMREDSIEGIYDTLTQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SKSAGGIG++V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 VSKSAGGIGLAVSCIRATGSYIAGTNGRSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+F FL LKKN GKEE RARDLF+ALW+PDLFM+RV++N WSL CP+E GL
Sbjct: 301 LEPWHSDVFAFLELKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPSECPGLI 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DCWG EFE+LYT YE+EG+AK+VV+AQ LW+ I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 DCWGEEFEELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLASIAL +V + R +
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPQRTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETA---RRSNLRHRPIGIGVQGLADTFILLGMA 537
DF KLA VT I+ NLNKIID+NYYPV RSN+RHRPIGIGVQGLAD FIL+
Sbjct: 462 DFNKLASVTKIIVRNLNKIIDINYYPVPEVCLLLRSNMRHRPIGIGVQGLADAFILMRHP 521
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR 597
+ESPEAQ LN IFETIYY AL+ S E+AA+ GPYETY SPVSKG+LQ DMW P+D
Sbjct: 522 YESPEAQLLNIQIFETIYYAALEASCELAAEFGPYETYAGSPVSKGVLQYDMWGKTPTDL 581
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN
Sbjct: 582 WDWNALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVN 641
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
HLL DLTE G+WS +KN++I +GS+Q I EIP++LK +YKTVWEI Q T++ MA DR
Sbjct: 642 PHLLKDLTERGLWSDAMKNQLIAHNGSIQDIQEIPDDLKQLYKTVWEISQKTVLKMAADR 701
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G YIDQSQSLNIH+ +P + K+TS+HF W GLKTGMYYLR++ AA+ I+FT++ K
Sbjct: 702 GAYIDQSQSLNIHIAEPTYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNREKLK 761
Query: 778 EKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
E E MA +VCSL N++ECM GS
Sbjct: 762 EAQSAKSKEEAKERNMAAMVCSLANKDECMMYGS 795
>gi|391328010|ref|XP_003738486.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 2 [Metaseiulus occidentalis]
Length = 783
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/809 (65%), Positives = 635/809 (78%), Gaps = 33/809 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV KRDGR+E VHFDKIT+R+ KL YGL+TE D ++QKV G+Y GVTT +LD+LA
Sbjct: 6 LYVEKRDGRKEPVHFDKITSRISKLCYGLNTEFVDATKITQKVIQGLYAGVTTKELDDLA 65
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIA+SNLHK TKK FSETI + N ++G P+I+++
Sbjct: 66 AETAATMTTKHPDYAVLAARIAISNLHKETKKHFSETIHILRTMSNGKTGKPMPMISEET 125
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +M N LDS I+YDRDF+Y+YFGF+TLERSYLLK+ GK+VERPQHMLMRVS+GIH
Sbjct: 126 YNFVMANKDRLDSAIVYDRDFNYNYFGFRTLERSYLLKIDGKIVERPQHMLMRVSVGIHG 185
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+++AI+TY+ MS++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIYETL +CA+
Sbjct: 186 DDVEAAIETYNFMSEKWFTHASPTLFNAGTCRPQLSSCFLLTMKDDSIEGIYETLSQCAL 245
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IR TGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 246 ISKSAGGIGVNIHCIRPTGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 305
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KN G EE RARDLFYALW+PDLFM+RV+ NG+WSL CPN GL+
Sbjct: 306 LEPWHGDIFEFLDLRKNTGIEEMRARDLFYALWIPDLFMKRVEQNGKWSLMCPNTCPGLS 365
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLY YE+EG+ + + AQ LW+ IL SQIETGTPYML+KD CNRKSNQQNL
Sbjct: 366 DTWGDEFEKLYEGYEKEGRYIRQIDAQKLWYTILESQIETGTPYMLYKDACNRKSNQQNL 425
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNLAS+AL RFV + F
Sbjct: 426 GTIKCSNLCTEIVEYSSPDEIAVCNLASVALNRFVHDGA--------------------F 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFE+L EVT +T NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ F+S
Sbjct: 466 DFERLREVTKAITRNLNKIIDINYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA LN IFETIY+ AL+ S E+A G YETY PVSKGILQ DMWNV PSD WDW
Sbjct: 526 PEAMDLNSKIFETIYFAALEASCELAEIHGTYETYAGCPVSKGILQHDMWNVKPSDLWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+++G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y+RRVLSGEF +VN HL
Sbjct: 586 DGLRRKIAQHGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYARRVLSGEFQIVNHHL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT++G+W+ T+KN+++ +GSVQ + +IP++LK +Y+TVWE+ Q ++ MA DRG +
Sbjct: 646 LKDLTDLGLWNETMKNELVASNGSVQNL-DIPDKLKQLYRTVWELPQKNIIKMAADRGAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH + NF K+TS+HF W GLKTGMYYLR++ AA AI+FTVD + K+K
Sbjct: 705 IDQSQSLNIHFAETNFGKLTSMHFYGWKLGLKTGMYYLRTKPAAQAIQFTVDKTKIKQKN 764
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMAC 809
+ +VCSLTN++ C++C
Sbjct: 765 AEA------------MVCSLTNKDACLSC 781
>gi|115398293|ref|XP_001214738.1| ribonucleoside-diphosphate reductase large chain [Aspergillus
terreus NIH2624]
gi|114192929|gb|EAU34629.1| ribonucleoside-diphosphate reductase large chain [Aspergillus
terreus NIH2624]
Length = 886
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/775 (65%), Positives = 621/775 (80%), Gaps = 18/775 (2%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V DGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LAAE
Sbjct: 25 VFPADGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLAAE 84
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA MT HPDYA LAARIAVSNLHK TKK FS I D++++ N R+ AP+I+ + YE
Sbjct: 85 TAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLFHYVNPRNNKPAPMISKETYE 144
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRV++GIH +D
Sbjct: 145 TVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHGND 204
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
I+ AI+TYH+MSQ++FTHASPTLF+AGTP+PQL+SCFLV MK+DSIEGIY+TLK CA+IS
Sbjct: 205 IEKAIETYHLMSQKYFTHASPTLFSAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAMIS 264
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K+AGGIG++VH IR+TGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+YLE
Sbjct: 265 KNAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIYLE 324
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWH+D+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV+ NG W+LFCPNEA GLAD
Sbjct: 325 PWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLADV 384
Query: 363 WGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGT 422
+G EF+ LY YE+EG+ ++ V+AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NLGT
Sbjct: 385 YGDEFDALYEKYEKEGRGRRTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNLGT 444
Query: 423 IKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDF 482
I+SSNLCTEI+EY++P E AVCNLAS+ALP FV +RG +DF
Sbjct: 445 IRSSNLCTEIVEYSAPDEVAVCNLASLALPTFVD--------------ATRGE----YDF 486
Query: 483 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPE 542
KL EV ++ NLNKIID+NYYPV AR+SN+RHRPI +GV GLAD F+ L + F+SPE
Sbjct: 487 GKLHEVVQVLVRNLNKIIDINYYPVPEARKSNMRHRPIALGVNGLADAFLALRLPFDSPE 546
Query: 543 AQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGV 602
A+QLN IFETIY+ AL SS++A + GPYETY SPVS+GILQ DMW+ P+D WDW
Sbjct: 547 AKQLNIQIFETIYHGALTASSDLAKELGPYETYEGSPVSQGILQYDMWDRTPTDLWDWDA 606
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL
Sbjct: 607 LKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLK 666
Query: 663 DLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYID 722
DL ++G+WS +KN+II + GSVQ IP IP ++K +YKTVWEI Q T++ MA DRG +ID
Sbjct: 667 DLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRTILQMAADRGAFID 726
Query: 723 QSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
QSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 727 QSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 781
>gi|391328008|ref|XP_003738485.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Metaseiulus occidentalis]
Length = 778
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/809 (65%), Positives = 635/809 (78%), Gaps = 33/809 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E VHFDKIT+R+ KL YGL+TE D ++QKV G+Y GVTT +LD+LA
Sbjct: 1 MHVLKRDGRKEPVHFDKITSRISKLCYGLNTEFVDATKITQKVIQGLYAGVTTKELDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIA+SNLHK TKK FSETI + N ++G P+I+++
Sbjct: 61 AETAATMTTKHPDYAVLAARIAISNLHKETKKHFSETIHILRTMSNGKTGKPMPMISEET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +M N LDS I+YDRDF+Y+YFGF+TLERSYLLK+ GK+VERPQHMLMRVS+GIH
Sbjct: 121 YNFVMANKDRLDSAIVYDRDFNYNYFGFRTLERSYLLKIDGKIVERPQHMLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+++AI+TY+ MS++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIYETL +CA+
Sbjct: 181 DDVEAAIETYNFMSEKWFTHASPTLFNAGTCRPQLSSCFLLTMKDDSIEGIYETLSQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IR TGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNIHCIRPTGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KN G EE RARDLFYALW+PDLFM+RV+ NG+WSL CPN GL+
Sbjct: 301 LEPWHGDIFEFLDLRKNTGIEEMRARDLFYALWIPDLFMKRVEQNGKWSLMCPNTCPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLY YE+EG+ + + AQ LW+ IL SQIETGTPYML+KD CNRKSNQQNL
Sbjct: 361 DTWGDEFEKLYEGYEKEGRYIRQIDAQKLWYTILESQIETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNLAS+AL RFV + F
Sbjct: 421 GTIKCSNLCTEIVEYSSPDEIAVCNLASVALNRFVHDGA--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFE+L EVT +T NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ F+S
Sbjct: 461 DFERLREVTKAITRNLNKIIDINYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA LN IFETIY+ AL+ S E+A G YETY PVSKGILQ DMWNV PSD WDW
Sbjct: 521 PEAMDLNSKIFETIYFAALEASCELAEIHGTYETYAGCPVSKGILQHDMWNVKPSDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+++G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y+RRVLSGEF +VN HL
Sbjct: 581 DGLRRKIAQHGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYARRVLSGEFQIVNHHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT++G+W+ T+KN+++ +GSVQ + +IP++LK +Y+TVWE+ Q ++ MA DRG +
Sbjct: 641 LKDLTDLGLWNETMKNELVASNGSVQNL-DIPDKLKQLYRTVWELPQKNIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH + NF K+TS+HF W GLKTGMYYLR++ AA AI+FTVD + K+K
Sbjct: 700 IDQSQSLNIHFAETNFGKLTSMHFYGWKLGLKTGMYYLRTKPAAQAIQFTVDKTKIKQK- 758
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMAC 809
+VCSLTN++ C++C
Sbjct: 759 -----------NAEAMVCSLTNKDACLSC 776
>gi|343425606|emb|CBQ69140.1| probable RNR1-ribonucleoside-diphosphate reductase large subunit
[Sporisorium reilianum SRZ2]
Length = 897
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/778 (65%), Positives = 626/778 (80%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV KRDGR+E V FDK+TAR+ KL YGL + DP+ +++KV G+Y+GVTT +LD LA
Sbjct: 2 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIDGIYEGVTTVELDNLA 61
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA TT HPDYA LAARIA+SNLHK T+K+FS+ ++D+Y + N ++G +P+I+D
Sbjct: 62 AETAAYKTTTHPDYAVLAARIAISNLHKETRKNFSQVVQDLYEYVNPKNGRHSPMISDTT 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M++ LDS IIY+RDF Y++FGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 122 YKVVMEHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY++MSQ++FTHASPTLFNAGTP PQLSSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 182 QDIDSAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+D+FEFL+L+KNHGKEE RAR+LFYALWVPDLFM+RV+ NG WSL CPNE GLA
Sbjct: 302 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 361
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY YE EG+ K+ V+AQ LW+ IL SQ ETG P++L+KD NRKSNQ+NL
Sbjct: 362 DCYGDEFERLYERYEAEGRFKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEIIEY++P E AVCNLASIALP F+ PV + +
Sbjct: 422 GTIKCSNLCTEIIEYSAPDEVAVCNLASIALPTFID----PV--------------TKTY 463
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF++L EV + +NLNKIID+NYYPVE ARRSN+RHRPIGIGVQGLAD F+++G AFES
Sbjct: 464 DFKRLHEVAKAICKNLNKIIDINYYPVEEARRSNMRHRPIGIGVQGLADAFMIMGYAFES 523
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL+ S E+A + G YETY SP S+G LQ DMW V PSD WDW
Sbjct: 524 PEARRLNVQIFETIYHAALERSCELAQEHGTYETYAGSPASQGELQYDMWGVTPSDLWDW 583
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 584 AELKAKIAKHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L +L E G+W+ T+KN+II GS+Q +P IPE +K +YKTVWEI Q ++DMA DRG +
Sbjct: 644 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPERIKKLYKTVWEISQKAIIDMAADRGAF 703
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
I QSQSLNIH+ P F ++TS+HF W +GLKTG YYLR++ A++AI+FT+ + E
Sbjct: 704 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAIQFTLSVAEVNE 761
>gi|452985233|gb|EME84990.1| hypothetical protein MYCFIDRAFT_214917 [Pseudocercospora fijiensis
CIRAD86]
Length = 914
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/777 (65%), Positives = 623/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++ KV GVY+GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDSTAITMKVINGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS + D+Y++ N ++ AP+I+D
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYHYVNPKTRKAAPMISDYT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRV++GIH
Sbjct: 121 YNVVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRIDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TY+ MS ++FTHASPTLF+AGTP QL+SCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 EDIEAAIETYNYMSNKYFTHASPTLFSAGTPNAQLASCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNVHRIRATGSYIGGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ F++L+KNHGKEE RARDLF+ALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVLAFMDLRKNHGKEEVRARDLFFALWIPDLFMKRVEENGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEKLY YE+EG+ ++ V+AQ +W+ IL +Q ETG P++L+KD CNRKSNQ+NL
Sbjct: 361 DVYGEEFEKLYEQYEKEGRGRETVRAQKIWYAILEAQTETGGPFILYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLASIALP +V D+ +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASIALPTYV---DI---------------ENETY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV +VT NLNK I++N+YPV AR+SN RHRPIG+GVQGLAD F+ L M F+S
Sbjct: 463 DFKKLHEVVQVVTRNLNKTIEINHYPVPEARKSNFRHRPIGLGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL S E+A K GPYETY SPVSKG LQ DMW V P+D WDW
Sbjct: 523 PEARRLNIQIFETIYHAALTASCELAEKLGPYETYEGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 TALKAKIAEHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + G+WS +KN+II D GS+Q+IP IP++LK +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDRGLWSENMKNRIIADGGSIQRIPNIPDDLKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD + K
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEMLK 759
>gi|384493683|gb|EIE84174.1| ribonucleoside-diphosphate reductase large chain [Rhizopus delemar
RA 99-880]
Length = 757
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 620/777 (79%), Gaps = 24/777 (3%)
Query: 33 HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK 92
+ DPV ++QKV +GVY+GVTT +LD LAAETAA MTT HPDYA LAARIA+SNLHK TKK
Sbjct: 3 YVDPVAITQKVISGVYEGVTTVELDNLAAETAAYMTTRHPDYALLAARIAISNLHKETKK 62
Query: 93 SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLE 152
FS+ I+D+YN+ N ++ +P+I+D Y+++ NA L+S IIYDRDF Y++FGFKTLE
Sbjct: 63 VFSQVIEDLYNYVNPKTNKHSPMISDTTYKVVQDNAERLNSAIIYDRDFKYNFFGFKTLE 122
Query: 153 RSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR 212
RSYLLK+ GK ERPQH++MRV+IGIH +DID+AI+TY++MS+++FTHASPTLFNAGTPR
Sbjct: 123 RSYLLKIDGKTAERPQHLIMRVAIGIHGEDIDAAIETYNLMSEKFFTHASPTLFNAGTPR 182
Query: 213 PQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGI 272
PQ+SSCFL+ MK+DSIEGIYETLK CA ISK+AGGIG+++HNIRA GSYI GTNG SNG+
Sbjct: 183 PQMSSCFLLTMKEDSIEGIYETLKICAQISKTAGGIGLNIHNIRANGSYIAGTNGYSNGL 242
Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYAL 332
+PMLRVFN+TARYVDQGG KR GAFA+YLEPWHADIF FL+L+KN GK+E RARDLFYAL
Sbjct: 243 LPMLRVFNNTARYVDQGGNKRPGAFAMYLEPWHADIFTFLDLRKNFGKDEIRARDLFYAL 302
Query: 333 WVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFE 392
WVPDLFM+RV+ G WSLFCPNEA GL D WG EF LY YEREG+A++ ++AQ LW+
Sbjct: 303 WVPDLFMQRVKDGGDWSLFCPNEAPGLQDVWGDEFVALYESYEREGRARETIKAQKLWYA 362
Query: 393 ILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 452
IL +Q ETG P+ML+KD CNRKSNQQNLGTIK SNLCTEI+EYTSP E AVCNLASIALP
Sbjct: 363 ILEAQTETGNPFMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTSPDEVAVCNLASIALP 422
Query: 453 RFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARR 512
FV ++ +DF++L EV ++T NLNKIID+NYYPV A R
Sbjct: 423 TFVINRES-------------------YDFKRLHEVAKVITRNLNKIIDINYYPVIEAER 463
Query: 513 SNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPY 572
SN RHRPIG+GVQGLADTF+ L F+SPEA+QLN IFETIY+ AL+ S E+A K GPY
Sbjct: 464 SNKRHRPIGLGVQGLADTFMALRYPFDSPEAKQLNIQIFETIYHAALEASCELAEKYGPY 523
Query: 573 ETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
ETY SPVSKGILQ DMWNV P+ WDW L++ I+K+GVRNSLL+APMPTASTSQ+LG
Sbjct: 524 ETYEGSPVSKGILQYDMWNVTPTSLWDWASLKEKIAKHGVRNSLLLAPMPTASTSQMLGF 583
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIP 692
NECFEPYTSN Y+RRVLSGE+ +VN LL DL +MGIW+ +KN I+ D GSVQ +P IP
Sbjct: 584 NECFEPYTSNFYTRRVLSGEYQMVNPWLLRDLVDMGIWNDEVKNMIMADGGSVQNVPTIP 643
Query: 693 EELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLK 752
+ LK +YKTVWEI Q T+VDMA DRG YIDQSQSLNI + +PNF K+TS+HF W +GLK
Sbjct: 644 QHLKELYKTVWEISQRTIVDMAADRGAYIDQSQSLNIFIAEPNFGKLTSMHFYGWQKGLK 703
Query: 753 TGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
TGMYYLR+R A DAIKFTVD +E +K E E A +VCS+ N++ CM+C
Sbjct: 704 TGMYYLRTRPAVDAIKFTVDQVSLREYRKKME-----EKNQADMVCSIDNKDACMSC 755
>gi|449301212|gb|EMC97223.1| hypothetical protein BAUCODRAFT_138578 [Baudoinia compniacensis
UAMH 10762]
Length = 920
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/777 (66%), Positives = 623/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL EH DP ++ KV +GVY+GVTT QLD+LA
Sbjct: 2 MYVFKRDGRKERVQFDKITARVSRLCYGLDPEHVDPAAITMKVISGVYQGVTTVQLDDLA 61
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK +S I D+Y++ N +S AP+I+++
Sbjct: 62 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKLWSSVISDLYHYVNPKSKKPAPMISEET 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 122 YNTVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TY++MS ++FTHASPTLF AGTP+ QL+SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 182 EDIEAAIETYNLMSNKYFTHASPTLFMAGTPQAQLASCFLIDMKEDSIEGIYDTLKTCAM 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKSAGGIGLNVHRIRATGSYIGGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F FL+L+KNHGKEE RARDLFYALW+PDLFM+RV++NG W+L CPNE GLA
Sbjct: 302 LEPWHADVFSFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVESNGNWTLMCPNECPGLA 361
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YEREG+ ++ ++AQ LW+ IL +Q ETG P+M +KD NRKSNQ+NL
Sbjct: 362 DVYGDEFEALYEQYEREGRGRETIRAQKLWYAILEAQTETGNPFMCYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY +P E AVCNLAS+ALP +V D+ +N +
Sbjct: 422 GTIRSSNLCTEIMEYCAPDEVAVCNLASLALPTYV---DI---------------QNEVY 463
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV +VT+NLNKII++NYYPV AR+SN RHRPIG+GV GLAD F+ L M F+S
Sbjct: 464 DFQKLHEVVKVVTKNLNKIINLNYYPVPEARKSNFRHRPIGLGVSGLADAFLALRMPFDS 523
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ AL++S EIAA+ GPYETY SPVSKG LQ DMWN P+D WDW
Sbjct: 524 DEAKLLNIQIFETIYHAALESSCEIAAELGPYETYEGSPVSKGELQYDMWNKEPTDLWDW 583
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 584 TSLKAKIAQHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + G+WS +KN+II D GS+Q IP IP+ELK +YKTVWEI Q +V MA DRG +
Sbjct: 644 LKDLVDRGLWSDNMKNRIIADGGSIQNIPNIPDELKALYKTVWEISQRHIVQMAADRGAF 703
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 704 IDQSQSLNIHMKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEKLK 760
>gi|440632150|gb|ELR02069.1| ribonucleoside-diphosphate reductase subunit M1 [Geomyces
destructans 20631-21]
Length = 827
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/772 (66%), Positives = 612/772 (79%), Gaps = 18/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KR+G +E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRNGNKERVQFDKITARVSRLCYGLDAEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ +P+IA
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIHDLYHYVNPKNSKPSPMIAKKT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+MK+A L+S ++YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YDIVMKHAEELNSAVLYDRDFNYQYFGFKTLERSYLLRLDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ +TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 EDIEKTTETYNLMSSKYFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 301 VEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGAWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EGK +K ++AQ LW+ IL SQ ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEGYEKEGKGRKTIKAQKLWYSILESQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY++P E AVCNLAS+ALP +V N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPTYV------------------DMANGTY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT +V +NLNKIIDVNYYPVE ARRSN RHRP+ +GVQGLAD F+ L + F+S
Sbjct: 463 DFQKLHEVTQVVVKNLNKIIDVNYYPVEEARRSNFRHRPVAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN IFETIY+ AL S E+A G YETY SPVSKG LQ DMW V P+D WDW
Sbjct: 523 PEAKFLNSQIFETIYHGALTASVELAQIHGTYETYEGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKVRIKQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVD 754
>gi|325286575|ref|YP_004262365.1| ribonucleoside-diphosphate reductase subunit alpha [Cellulophaga
lytica DSM 7489]
gi|324322029|gb|ADY29494.1| ribonucleoside-diphosphate reductase, alpha subunit [Cellulophaga
lytica DSM 7489]
Length = 825
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/789 (65%), Positives = 633/789 (80%), Gaps = 26/789 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR+E + FDKITAR++KL YGL+ DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGRKELIMFDKITARVRKLCYGLNA-LVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI+VSNLHKNTKKSFSE +KD+Y + N R+G KAPL++D++
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSEVMKDLYEYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++I N+ LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVSIGIH
Sbjct: 120 FKVIQDNSEKLDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D+AI+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 NDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNG+VPMLRV+NDTARYVDQGGGKRKG+FAVY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGVVPMLRVYNDTARYVDQGGGKRKGSFAVY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIFEFL+LKKNHGKEE RARDLFYA+W+PDLFM+RV+ N W+L CPNE L
Sbjct: 300 VEPWHADIFEFLDLKKNHGKEEMRARDLFYAMWIPDLFMQRVEANADWTLMCPNECPDLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
EFE+ Y +E EGK +K ++A++LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 KKHDKEFEEAYLAFEAEGKGRKTIKARDLWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLASIALP FV KN F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASIALPMFV--------------------KNGEF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L VT VT NLN +ID NYYPV A SN+RHRPIG+GVQGLAD FI++ M F S
Sbjct: 460 DHKELFRVTKRVTRNLNTVIDRNYYPVVEAENSNMRHRPIGLGVQGLADAFIMMRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+YY A+ S E+A ++GPY +Y SP+SKG Q ++W + S R
Sbjct: 520 DEAKKLNQEIFETLYYAAVTASMEMAKEDGPYSSYEGSPISKGDFQHNLWGIKDDELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWEKLRKSVLKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL ++G+W+ ++K +++ +GS+Q I IPE++K +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVQLGLWNESLKQELMRANGSIQHIDIIPEDIKELYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR++AAADAIKFTVD S K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKAAADAIKFTVDNSKKK 759
Query: 778 EKP--EKPE 784
EKP E PE
Sbjct: 760 EKPVVEAPE 768
>gi|67528364|ref|XP_661984.1| RIR1_NEUCR Ribonucleoside-diphosphate reductase large chain
(Ribonucleotide reductase large subunit) [Aspergillus
nidulans FGSC A4]
gi|40741107|gb|EAA60297.1| RIR1_NEUCR Ribonucleoside-diphosphate reductase large chain
(Ribonucleotide reductase large subunit) [Aspergillus
nidulans FGSC A4]
gi|259482810|tpe|CBF77645.1| TPA: ribonucleoside-diphosphate reductase large chain (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 865
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/771 (65%), Positives = 619/771 (80%), Gaps = 18/771 (2%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LAAETAA
Sbjct: 21 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLAAETAAY 80
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ + YEI+MK
Sbjct: 81 MTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNKKPAPMISKETYEIVMK 140
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GK+ ERPQH+LMRV++GIH +DI+ A
Sbjct: 141 HAEELNSAIVYDRDFNYNFFGFKTLERSYLLRLDGKIAERPQHLLMRVAVGIHGNDIERA 200
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+PQL+SCFLV MK+DSI+GIY+TLK CA+ISK+AG
Sbjct: 201 IETYNLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIDGIYDTLKTCAMISKTAG 260
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 261 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 320
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
D+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV+ NG W+LFCPNEA GLAD +G E
Sbjct: 321 DVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLADVYGDE 380
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
F+ LY YE+EG+ ++ ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NLGTI+SS
Sbjct: 381 FDALYEQYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNLGTIRSS 440
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEIIEYT+P E AVCNLAS+ALP FV SRG +DF KL
Sbjct: 441 NLCTEIIEYTAPDEVAVCNLASLALPTFVD--------------ASRGE----YDFGKLH 482
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L + F+S EA+QL
Sbjct: 483 EVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDSAEAKQL 542
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
N IFETIY+ AL SS +A ++GPYE+Y SPVS+GILQ DMW P+D WDW L+
Sbjct: 543 NIQIFETIYHAALTASSNLAKEDGPYESYEGSPVSQGILQYDMWERTPTDLWDWDALKAK 602
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 603 IAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 662
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
+G+WS +KN+II + GSVQ IP IP+++K +YKTVWEI Q +++MA DRG YIDQSQS
Sbjct: 663 LGLWSDNMKNRIIAEGGSVQNIPNIPDDIKALYKTVWEISQRRILEMAADRGAYIDQSQS 722
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
LNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 723 LNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 773
>gi|403170913|ref|XP_003330173.2| ribonucleoside-diphosphate reductase large chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|375168944|gb|EFP85754.2| ribonucleoside-diphosphate reductase large chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 872
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/776 (65%), Positives = 618/776 (79%), Gaps = 20/776 (2%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V KRDGR+E V FDKITAR+ KL YGL H +P+ +++KV GV+ GVTT +LD LAAE
Sbjct: 4 VYKRDGRREKVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAAE 63
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA MTT HPDYA LAARIA+SNLHK TKK FS+ I+D+Y + N +G + +I+ + YE
Sbjct: 64 TAAYMTTRHPDYAVLAARIAISNLHKETKKLFSQVIEDLYTYVNPINGRPSSMISQETYE 123
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
+ NA L+S +IYDRDF+Y+YFGFKTLERSYLL+++GKV ERPQHMLMRV++GIH D
Sbjct: 124 AVQANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRIKGKVAERPQHMLMRVAVGIHGMD 183
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
++ AI+TY++MS+++FTHASPTLFNAGTP PQLSSCFLV K DSI+GIY+TLK CA+IS
Sbjct: 184 VEKAIRTYNLMSEKYFTHASPTLFNAGTPHPQLSSCFLVASKSDSIDGIYDTLKTCAMIS 243
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
KSAGGIG+ ++NIRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLE
Sbjct: 244 KSAGGIGLHINNIRATGSYISGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLE 303
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWHAD+F++L+L+KNHGKEE RARDLFYALW+PDLFM RV+ N W LFCP EA GLAD
Sbjct: 304 PWHADVFDWLDLRKNHGKEESRARDLFYALWIPDLFMSRVEKNQDWPLFCPAEAPGLADV 363
Query: 363 WGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGT 422
+G EFE L+ YE+E +AKK V+AQ LW+ IL +Q ETG P+ML+KD N+KSNQ+NLGT
Sbjct: 364 YGEEFEALFAKYEKENRAKKTVKAQKLWYAILEAQTETGNPFMLYKDAANKKSNQKNLGT 423
Query: 423 IKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDF 482
IKSSNLCTEIIEY++P E AVCNLASIALP ++ + +DF
Sbjct: 424 IKSSNLCTEIIEYSAPDEVAVCNLASIALPTYIVDGK--------------------YDF 463
Query: 483 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPE 542
KL EVT VT NLNKIIDVNYYPV A++SN+RHRPIGIGVQGLAD F +L + FESPE
Sbjct: 464 NKLHEVTKEVTYNLNKIIDVNYYPVPEAKKSNMRHRPIGIGVQGLADAFQILKLPFESPE 523
Query: 543 AQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGV 602
A++LN IFET+Y+ +L+ S+E+A KEGPYET+ SP S+GILQ DMWNV PSD W+W
Sbjct: 524 AKKLNTQIFETLYHASLEASNELAIKEGPYETFPGSPASQGILQFDMWNVKPSDLWEWDS 583
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L++ + G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN LL
Sbjct: 584 LKEKVKTTGIRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVNPWLLK 643
Query: 663 DLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYID 722
+L EMG+W +KN+II GS+Q IP IP E+K +YKTVWEI Q ++DMA DRG +ID
Sbjct: 644 ELVEMGLWDDEMKNRIIAHQGSIQNIPNIPTEMKAVYKTVWEISQKIILDMAADRGAFID 703
Query: 723 QSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLNIH+ P F ++TS+HF W +GLKTGMYYLR+RAAA+AI+FTVD + E
Sbjct: 704 QSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKLQDE 759
>gi|156043867|ref|XP_001588490.1| ribonucleotide reductase large subunit [Sclerotinia sclerotiorum
1980]
gi|154695324|gb|EDN95062.1| ribonucleotide reductase large subunit [Sclerotinia sclerotiorum
1980 UF-70]
Length = 910
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/772 (65%), Positives = 616/772 (79%), Gaps = 18/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L Y L +H D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKERVQFDKITARVSRLCYALDPDHIDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I+D+Y + N ++G +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSHVIRDLYQYTNPKNGKASPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+E +M++ L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRV++GIH
Sbjct: 121 FECVMRHEEELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAI+TY++MS ++FTHASPTLF+AGTP+ QLSSCFL+ MK+DSI+GIY+TLK CA+
Sbjct: 181 DDIESAIETYNLMSNKYFTHASPTLFSAGTPQAQLSSCFLIDMKEDSIDGIYDTLKICAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKNAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+ GK +K ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFEALYESYEKAGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY++P E A CNLASIALP FV + G+ +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVACCNLASIALPTFVNMNE-----------GT-------Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV +V NLNKIID+NYYPV+ ARRSN RHRPI +GVQGLAD F+ L + F+S
Sbjct: 463 DFQKLHEVVQVVVRNLNKIIDINYYPVQEARRSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN IFETIY+ AL +S EIA + GPYETY SPVSKG LQ DMW V PSD WDW
Sbjct: 523 PEAKHLNIQIFETIYHAALTSSVEIAKELGPYETYQGSPVSKGELQYDMWGVTPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKQSIKQHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS+NIHM P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD
Sbjct: 703 IDQSQSMNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVD 754
>gi|358365971|dbj|GAA82592.1| ribonucleotide reductase large subunit RNR1 [Aspergillus kawachii
IFO 4308]
Length = 864
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/777 (65%), Positives = 621/777 (79%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNAPAPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRV++GIH
Sbjct: 121 YEIIMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+ AI+TY++MSQ++FTHASPTLFNAGTP+PQL+SCFLV MK+DSI+GIY+TLK CA+
Sbjct: 181 SDIEKAIETYNLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IR+TGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL+L+KNHGKEE RARDLFYALW PDLFM+RV+ NG W+LFCPNEA GLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE+EG+ ++ ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYEKYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEY++P E AVCNLAS+ALP FV +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L + F+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+QLN IFETIY+ L SS++A + G YETY SPVS+GILQ DMW+ P+D WDW
Sbjct: 523 AEARQLNIQIFETIYHAGLTASSDLAKEFGTYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+WS +KN+II + GSVQ IP IP ++K +YKTVWEI Q T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPSDIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|325953831|ref|YP_004237491.1| ribonucleoside-diphosphate reductase subunit alpha [Weeksella
virosa DSM 16922]
gi|323436449|gb|ADX66913.1| ribonucleoside-diphosphate reductase, alpha subunit [Weeksella
virosa DSM 16922]
Length = 779
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/811 (64%), Positives = 639/811 (78%), Gaps = 32/811 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KR+G+QEAVHFDKITAR+ KL YGLS + D + +++KV G+Y VTT++LD LA
Sbjct: 1 MYVIKRNGKQEAVHFDKITARIHKLVYGLSVDEKDVIEIAKKVIQGIYDNVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA TT HPD+A LAARI+VSNLHKNT KSFS+T K +Y++ + + +APL++++
Sbjct: 61 AETAATYTTVHPDFAVLAARISVSNLHKNTLKSFSKTAKLLYDYIDPVTNTRAPLLSEET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II NA +DS IIYDRD+++DYFGFKTLERSYL++ GKV ERPQH+ MRV++GIHK
Sbjct: 121 YDIIRNNADEIDSSIIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI +AI+TY++MS++WF HA+PTLFN+GTP+PQ+SSCFL+ M +DSI GI++TLK CA+
Sbjct: 181 QDIKAAIETYNLMSEKWFIHATPTLFNSGTPKPQMSSCFLLSMTEDSIVGIFDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI+GT G SNGI+PMLRV+NDTARYVDQGGGKRKGA AVY
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTGGISNGIIPMLRVYNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FLNL+KNHGKEE RARDLF ALW+PDLFM+RV+ N WSLF PNEA GL
Sbjct: 301 LEPWHADIFDFLNLRKNHGKEEMRARDLFPALWIPDLFMQRVEENADWSLFDPNEAPGLY 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G+ FE+LY HYE +G +K V+A+ LW IL +QIETGTPYM +KD N KSNQ+N+
Sbjct: 361 DVYGSSFEELYQHYENDGIFRKKVKARELWNAILEAQIETGTPYMCYKDAANEKSNQKNI 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G I+SSNLCTEI+EYTS E AVCNLAS+ALPR+V E F
Sbjct: 421 GVIRSSNLCTEIMEYTSADEVAVCNLASLALPRYVSENG--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT IVT NLNK+ID NYYPV SN +HRPIG+GVQGLAD F+LL M FES
Sbjct: 461 DFQKLYEVTKIVTRNLNKVIDGNYYPVPETENSNFKHRPIGLGVQGLADVFLLLRMPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A+QLNKDIFETIYY A+++S E+A +EG YE++ SP+S+G Q D+WNV PSDRWDW
Sbjct: 521 EKARQLNKDIFETIYYAAMESSMELAKEEGAYESFKGSPLSEGKFQFDLWNVQPSDRWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + + GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHL
Sbjct: 581 KGLRKNVMEFGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL E+ +W +KNK+I ++GSVQ I EIP LK +YKTVWEIKQ T++DMA DRG +
Sbjct: 641 IKDLIELNLWDARMKNKLIAENGSVQNIEEIPANLKELYKTVWEIKQKTIIDMAADRGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLN+ M +PN K+TS+HF W GLKTGMYYLR++AAADAIKFTV
Sbjct: 701 ICQSQSLNLFMAEPNMAKLTSMHFYAWKSGLKTGMYYLRTKAAADAIKFTV--------- 751
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
E V E K + CSL N +EC+ CGS
Sbjct: 752 ---EKVQSSEDKQVDISCSLDNPDECIVCGS 779
>gi|361127300|gb|EHK99273.1| putative Ribonucleoside-diphosphate reductase large chain [Glarea
lozoyensis 74030]
Length = 993
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/790 (64%), Positives = 621/790 (78%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL TEH D ++QKV +GVY+GVTT +LD LA
Sbjct: 29 MYVWKRDGRKERVQFDKITARVSRLCYGLDTEHVDAAAITQKVISGVYQGVTTFELDNLA 88
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I D+Y++ N R+ +P+I+ +
Sbjct: 89 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVISDLYHYTNPRNKKLSPMISKET 148
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +MK+ A L+S I+YDRDF+Y YFGFKTLERSYLL++ G+V ERPQHM+MRV++GIH
Sbjct: 149 YETVMKHEAELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGEVAERPQHMIMRVAVGIHG 208
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TY++MS ++FTHASPTLF AGTP+ QLSSCFL+ MKDDSI+GIY+TLK CA+
Sbjct: 209 EDIEAAIETYNLMSSKFFTHASPTLFAAGTPQAQLSSCFLIDMKDDSIDGIYDTLKTCAM 268
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 269 ISKNAGGIGLNVHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 328
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FE+L+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE GLA
Sbjct: 329 LEPWHADVFEYLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGDWTLMCPNECPGLA 388
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG +K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 389 DVYGDEFEALYERYEKEGMGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNRKSNQKNL 448
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY+SP E A CNLAS+ALP FV D+ N +
Sbjct: 449 GTIRSSNLCTEIVEYSSPDEVACCNLASMALPTFV---DI---------------NNGTY 490
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +V +V +NLNKII+VNYYPV A++SN RHRPI +GVQGLAD F+ L + FES
Sbjct: 491 DFQKLHDVCQVVVKNLNKIIEVNYYPVPEAKKSNFRHRPIALGVQGLADVFLALRLPFES 550
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN IFETIY+ AL S +A K G YETY SPVSKG LQ DMW V P+D WDW
Sbjct: 551 PEAKHLNIQIFETIYHAALTASCNLAKKLGTYETYEGSPVSKGELQYDMWGVTPTDLWDW 610
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 611 ASLKQEIKQHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 670
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 671 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 730
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV--------D 772
IDQSQS+NIHM P K+TS+HF W GLKTGMYYLR+ AA+ I+FTV D
Sbjct: 731 IDQSQSMNIHMKDPTMGKITSMHFAGWKSGLKTGMYYLRTMAASAPIQFTVDQEALLVAD 790
Query: 773 TSVFKEKPEK 782
T+V +E+ K
Sbjct: 791 TNVARERTSK 800
>gi|154297725|ref|XP_001549288.1| hypothetical protein BC1G_12274 [Botryotinia fuckeliana B05.10]
gi|347829519|emb|CCD45216.1| similar to ribonucleoside-diphosphate reductase subunit large
[Botryotinia fuckeliana]
Length = 909
Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/772 (65%), Positives = 614/772 (79%), Gaps = 18/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D ++QKV +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKERVQFDKITARVSRLCYGLDPDHIDAAAITQKVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS I+D+Y + N R+G +P+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSHVIRDLYQYTNPRNGTASPMISKQT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++ L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRV++GIH
Sbjct: 121 YECVMRHEEELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAI+TY++MS ++FTHASPTLF+AGTP+ QLSSCFL+ MK+DSI+GIY+TLK CA+
Sbjct: 181 DDIESAIETYNLMSNKYFTHASPTLFSAGTPQAQLSSCFLIDMKEDSIDGIYDTLKICAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKNAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG+W+L CPNE GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+ GK +K ++AQ LW+ IL +Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKAGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY++P E A CNLASIALP FV + G+ +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVACCNLASIALPTFVNMNE-----------GT-------Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV +V NLNKIID+NYYPV AR+SN RHRPI +GVQGLAD F+ L + F+S
Sbjct: 463 DFQKLHEVVQVVVRNLNKIIDINYYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN IFETIY+ AL +S EIA + GPYETY SPVSKG LQ DMW V P+D WDW
Sbjct: 523 PEAKHLNIQIFETIYHAALTSSVEIAKELGPYETYQGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKQSIKQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +MG+WS +KN+II D GS+Q IP IP ++K +YKTVWEI Q T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS+NIHM P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD
Sbjct: 703 IDQSQSMNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVD 754
>gi|156836703|ref|XP_001642400.1| hypothetical protein Kpol_259p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156112918|gb|EDO14542.1| hypothetical protein Kpol_259p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 874
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/775 (64%), Positives = 630/775 (81%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL H DPV V+Q++ GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARISRLCYGLDPNHIDPVKVTQRIITGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA+LAAR+A+SNLHK T K FS+ + D+Y++ N + APL+++++
Sbjct: 61 AETAAYMTTVHPDYATLAARLAISNLHKQTTKLFSQVVDDLYHYINPENSKHAPLVSEEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M++ L+S I+YDRDF ++YFGFKTLERSYLL+++G+V ERPQH++MRV+IGIH
Sbjct: 121 YNIVMEHKDELNSAIVYDRDFQFNYFGFKTLERSYLLRMKGEVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TY++MSQR+FTHASPTLFNAGTP PQ+SSCFLV MKDDS+EGI++TLKECA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSLEGIFDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAMALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+EA GL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGDWTLFSPSEAPGLE 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFE LY Y EG+ +K ++AQ LW+ IL +Q ETGTP+ML+KD CN KSN +NL
Sbjct: 361 EVYGEEFEALYNRYVAEGRGRKTIKAQKLWYSILEAQTETGTPFMLYKDACNTKSNHKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY++P ETAVCNLASIALP F+ S +++ +
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIEV--------------SEDGRSQTY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E++ +VT NLNK+ID NYYPVE AR SN RHRPI +GVQGLADTF+LL + FES
Sbjct: 467 NFKKLHEISKVVTRNLNKVIDRNYYPVEEARNSNFRHRPIALGVQGLADTFMLLRIPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFET+Y+ AL+ S E+A KEG YE+Y NSPVS+G+LQ DMWN PSD WDW
Sbjct: 527 KEAKELNTHIFETMYHAALEASCELAEKEGYYESYPNSPVSQGVLQYDMWNRKPSDLWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+GVRNSLL+APMPTASTSQILG NECFEP+TSN+Y RRVLSGEF +VN +L
Sbjct: 587 ATLKEQIKKHGVRNSLLLAPMPTASTSQILGYNECFEPFTSNMYQRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I D+GS+Q +P IP+ELK +YKTVWEI Q T++DMA DR +
Sbjct: 647 LRDLVDLGIWDESMKQHLITDNGSIQNLPNIPQELKDLYKTVWEISQKTIIDMATDRSAF 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS S+NIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D SV
Sbjct: 707 IDQSHSMNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSV 761
>gi|254565653|ref|XP_002489937.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|238029733|emb|CAY67656.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|328350349|emb|CCA36749.1| ribonucleoside-diphosphate reductase subunit M1 [Komagataella
pastoris CBS 7435]
Length = 867
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/772 (65%), Positives = 622/772 (80%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDG +E V FDKITAR+ +L YGL +H D V ++Q+V +GVY GVTT +LD LA
Sbjct: 1 MYVFKRDGHKEPVRFDKITARVSRLCYGLDPKHVDAVAITQRVISGVYHGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K +S+ K++Y + N ++G +PL+++D
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQYSQVTKELYEYINPKNGKHSPLVSEDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ K+A L+S I+YDRDF Y+YFGFKTLERSYLL++ G V ERPQH++MRV+IGIH
Sbjct: 121 YNIVQKHADELNSAIVYDRDFQYNYFGFKTLERSYLLRINGNVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI I+TY+ MSQ++FTHASPTLFNAGTP PQ+SSCFLV M+DDSIEGIY+TLKECA+
Sbjct: 181 DDIARVIETYNFMSQKYFTHASPTLFNAGTPHPQMSSCFLVAMRDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+EA GLA
Sbjct: 301 LEPWHADIFAFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPSEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YE+EG+ ++ ++AQ LW+ IL +Q ETGTP+ML+KD CN+K+NQ+NL
Sbjct: 361 DVYGDEFEELYERYEKEGRGRQTIKAQKLWYAILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP ETAVCNLASIALP FV D + ++
Sbjct: 421 GVIKSSNLCCEIVEYSSPEETAVCNLASIALPAFVETDDT----------------HCWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL E+T +VT NLN+IID N+YPV ARRSN+R+RPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFEKLHEITKVVTRNLNRIIDRNFYPVPEARRSNMRNRPIAVGVQGLADAFMKLRIPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL+ S+E+A +EG YET+ SP S+GILQ D+W+ PS+ W+W
Sbjct: 525 PEAKQLNIQIFETIYHAALEASNELAVEEGAYETFQGSPASQGILQYDLWDKKPSELWEW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 ESLKAKIVSTGLRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W +KN II D+GS+Q +P IPE+LK +YKTVWEI Q T++DMA DR Y
Sbjct: 645 LRDLVDLGLWDDNMKNHIISDNGSIQNLPNIPEQLKGLYKTVWEISQKTIIDMAADRSAY 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 705 IDQSQSLNIHLMAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|221125331|ref|XP_002156185.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Hydra magnipapillata]
Length = 821
Score = 1094 bits (2830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/811 (62%), Positives = 640/811 (78%), Gaps = 11/811 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR GRQE HFDKIT+R+KKL +GL ++ P ++ KV G+Y G+TT +LD LA
Sbjct: 18 MFVIKRGGRQEECHFDKITSRIKKLCFGLDMKYISPYAITWKVIRGMYPGITTVELDTLA 77
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA+MTT HPDYA LAARIA+SNLHK TKK FS+TI D+YN+ + + P++++++
Sbjct: 78 AEVAASMTTKHPDYALLAARIAISNLHKETKKKFSDTIADLYNYISPEINMNCPMVSEEV 137
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+ KN LD II RDF+Y YFGFKTLERSYLLK+ GK ERPQHMLMRVS+GIH
Sbjct: 138 YQIVQKNKERLDGAIISSRDFEYHYFGFKTLERSYLLKINGKTAERPQHMLMRVSVGIHG 197
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D+AI+TY++MS++WFTHASPTLFN+GTPRPQ+SSCFL+ M+ DSIEGI++T+K+CA+
Sbjct: 198 EDLDAAIETYNLMSEKWFTHASPTLFNSGTPRPQMSSCFLLAMQSDSIEGIFDTVKQCAI 257
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H IR++GSYI GTNG SNGI+PMLRVFN+TARYVDQGG KR G+ A+Y
Sbjct: 258 ISKWAGGIGLHIHCIRSSGSYIAGTNGHSNGIIPMLRVFNNTARYVDQGGNKRPGSIAIY 317
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL+LKKN GKEE RARDLF+ LWVPDLFM RV+ G WSL CP+E GLA
Sbjct: 318 LEPWHADIIDFLDLKKNTGKEEQRARDLFFGLWVPDLFMRRVEEKGMWSLMCPHECPGLA 377
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY YE EG+ +K + AQ LWF IL SQ ETGTPYML+KD+CNRKSNQ+NL
Sbjct: 378 DCYGEEFEELYQKYESEGRYRKQIPAQKLWFAILESQTETGTPYMLYKDSCNRKSNQKNL 437
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRF--VREKDVPVESHPSRIVGSRGSKNR 478
GT+K SNLCTEI+EYTS E AVCNLASI++ F V + V + S +++V K
Sbjct: 438 GTLKCSNLCTEILEYTSSDEIAVCNLASISVNSFVTVNSETVTLPSGETKLV-----KTG 492
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
+DF+KL VT ++T NLNK+ID N+YPV AR SN+RHRPIGIGVQGLAD FIL+ F
Sbjct: 493 VYDFKKLKYVTKVITRNLNKVIDRNFYPVPEARNSNMRHRPIGIGVQGLADAFILMRFPF 552
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW 598
ES EA LNK IFETIYY AL+ S E+A K+G YE+Y SP+SKGILQ DMWNV P++ W
Sbjct: 553 ESDEASLLNKQIFETIYYGALEASCELAEKDGTYESYQGSPISKGILQYDMWNVTPTNLW 612
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
+W L+ I+ +GVRNSLLVAPMPTAST+QILGNNE EPYT+NIYSRRVLSGEF VVNK
Sbjct: 613 NWAELKAKIALHGVRNSLLVAPMPTASTAQILGNNESIEPYTNNIYSRRVLSGEFQVVNK 672
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
HL+ DLT++ +W +KN +I +GSVQ I EIP ++K++YKT WEIKQ +L++MA DRG
Sbjct: 673 HLMKDLTDLNLWDDNMKNTLIAHNGSVQNIDEIPADIKVLYKTAWEIKQKSLINMAADRG 732
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
+IDQSQS N+ + +P+F +T++HF W +GLKTGMYYLR++ AA+AI+FTVD + K+
Sbjct: 733 AFIDQSQSFNVFLGEPSFSTLTAIHFYGWKKGLKTGMYYLRTKPAANAIQFTVDQNKLKQ 792
Query: 779 KPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ DD+ K ++CSL N+++CM+C
Sbjct: 793 SNNLKQ--TDDDLK--SLICSLENKDQCMSC 819
>gi|351702964|gb|EHB05883.1| Ribonucleoside-diphosphate reductase large subunit, partial
[Heterocephalus glaber]
Length = 787
Score = 1094 bits (2830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/806 (65%), Positives = 642/806 (79%), Gaps = 20/806 (2%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LAAETAA
Sbjct: 1 DGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAAT 60
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
+TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A +I++
Sbjct: 61 LTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVAKSTLDIVLA 120
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK+DID+A
Sbjct: 121 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAA 180
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+ISKSAG
Sbjct: 181 IETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAG 240
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH
Sbjct: 241 GIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHL 300
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL + WG E
Sbjct: 301 DIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEE 360
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD-TCNRKSNQQNLGTIKS 425
FEKLY YE++G+ ++VV+AQ LW+ I+ SQ ETGTPYML+KD + N+KSNQQNLGTIK
Sbjct: 361 FEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDYSYNQKSNQQNLGTIKC 420
Query: 426 SNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKL 485
SNLCTEI+EYTS E AVCNLAS+AL +V + +DF+KL
Sbjct: 421 SNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTYDFKKL 461
Query: 486 AEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQ 545
AEVT ++ NLNKIID+NYYP+ A SN HRPIGIGVQGLAD FIL+ FESPEAQ
Sbjct: 462 AEVTKVIVRNLNKIIDINYYPIPEAHLSNKCHRPIGIGVQGLADAFILMRYPFESPEAQL 521
Query: 546 LNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRD 605
LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW +L++
Sbjct: 522 LNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKLLKE 581
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLT
Sbjct: 582 KIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLT 641
Query: 666 EMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQ 725
E G+W+ +KN+II +GS+Q I EIP++LK +YKTVWEI Q T++ MA DRG +IDQSQ
Sbjct: 642 ERGLWNEEMKNQIIACNGSIQSILEIPDDLKQLYKTVWEISQKTVLKMAADRGAFIDQSQ 701
Query: 726 SLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPEL 785
SLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K + +
Sbjct: 702 SLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKASKE 761
Query: 786 VVDDETKMAQVVCSLTNREECMACGS 811
+ E A +VCSL NR+EC+ CGS
Sbjct: 762 EEEKERNTAAMVCSLENRDECLMCGS 787
>gi|423315656|ref|ZP_17293561.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum ATCC 43767]
gi|405585760|gb|EKB59563.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum ATCC 43767]
Length = 777
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/811 (63%), Positives = 647/811 (79%), Gaps = 34/811 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G++EAVHFDKITAR+ KL YGLS D + +++KV G+Y VTT++LD LA
Sbjct: 1 MFVIKRNGKKEAVHFDKITARIHKLIYGLSISEKDVIEIAKKVIQGIYDNVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA TT HPD++ LAARIAVSNLHKNT KSFS+T + +Y + + + APLI+++I
Sbjct: 61 AETAAAQTTIHPDFSVLAARIAVSNLHKNTLKSFSKTAQLLYEYTDPITQTHAPLISEEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II KNA LDS +IYDRD+++DYFGFKTLERSYL++ GKV ERPQH+ MRV++GIHK
Sbjct: 121 YKIIRKNADELDSSVIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI+TY++MS++WF HA+PTLFNAGTP+PQ+SSCFL+ M +DSI GI++TLK CA+
Sbjct: 181 EDIQAAIETYNLMSEKWFIHATPTLFNAGTPKPQMSSCFLLSMTEDSIAGIFDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIGVS+HNIR+TGSYI+GT G SNGI+PMLRVFNDTARYVDQGGGKRKGA AVY
Sbjct: 241 ISQSAGGIGVSIHNIRSTGSYIKGTGGISNGIIPMLRVFNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIF+F++++KNHGKEE RARDLF ALW+ DLFM+RV+ + WSLF PNEA GL
Sbjct: 301 IEPWHSDIFDFIDIRKNHGKEEMRARDLFPALWISDLFMQRVEADQMWSLFDPNEAQGLY 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G +F +LYT YE EGK +K ++A+ LW IL +QIETGTPYM +KD N KSNQ+N+
Sbjct: 361 EVYGEKFNELYTTYENEGKFRKQIKARELWTAILEAQIETGTPYMCYKDAVNEKSNQKNI 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+ E AVCNLAS+ALPR+V +K F
Sbjct: 421 GTIRSSNLCTEIMEYTNADEVAVCNLASLALPRYVSDKG--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT IVT NLNKIID NYYP+ + SN RHRPIG+GVQGLAD F+LL + FES
Sbjct: 461 DFQKLYEVTKIVTRNLNKIIDGNYYPIPETKTSNDRHRPIGLGVQGLADVFLLLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A++LNKDIFETIY+ +++ S E+A ++G Y ++ SP+S+G Q D+W V PSDRWDW
Sbjct: 521 EAARKLNKDIFETIYFASMEASMELAKEQGAYSSFAGSPLSEGKFQFDLWQVAPSDRWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK L
Sbjct: 581 EKLRNEVMTHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKFL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+G+W+PT+KNK+I ++GSVQ IPEIP ELK +YKTVWEIKQ T++DMA +RG +
Sbjct: 641 LKDLIELGLWNPTMKNKLIAENGSVQNIPEIPTELKELYKTVWEIKQKTIIDMAAERGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLN+ M +PNF K+TS+HF W GLKTGMYYLR++AA DAIKFTVDT +
Sbjct: 701 ICQSQSLNLFMAEPNFAKLTSMHFHAWKSGLKTGMYYLRTKAAVDAIKFTVDTQIL---- 756
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ +QV CSL N EEC+ACGS
Sbjct: 757 ----------SGQSQVACSLDNPEECLACGS 777
>gi|194761754|ref|XP_001963091.1| GF14111 [Drosophila ananassae]
gi|190616788|gb|EDV32312.1| GF14111 [Drosophila ananassae]
Length = 812
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/822 (62%), Positives = 640/822 (77%), Gaps = 32/822 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGRQE VHFDKIT+R++KL Y L+ + DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A +T NH DYA LAARIAVSNLHK T+K FS+ + +Y H N+ + L+APL+++
Sbjct: 72 AEISAGLTCNHADYAILAARIAVSNLHKETRKVFSDVFEALYTHVNKETNLRAPLVSEFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++ KNA L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+IGIH
Sbjct: 132 YNVVKKNADRLNSSIIYDRDFGYNYFGFKTLERSYLLKINGKVAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+A++TY+++S+R+FTHASPTLF A T RPQLSSCFL+ M DSIEGI++++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL+LKKN GKEEHRARDLFYALW+PDLFM+RV+ N WSL CP++ GL
Sbjct: 312 LEPWHSDVFEFLDLKKNTGKEEHRARDLFYALWIPDLFMKRVEANEDWSLMCPHKCPGLH 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLY YE+EG+A + V+AQ+LWF I+ SQ+ETG PYMLFKD CNRKSNQQN+
Sbjct: 372 DVWGDEFEKLYVKYEQEGRANRTVKAQSLWFAIIESQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNLASIAL FV + + +
Sbjct: 432 GTIKCSNLCTEIVEYSSPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT V NLNKIID+N+YP+ A++SN+RHRPIGIGVQGLAD IL+ +ES
Sbjct: 473 DFKKLKEVTKTVARNLNKIIDINFYPLPEAKKSNMRHRPIGIGVQGLADALILMRYPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ IFETIY+ AL+ S E+A K+G YETY SPVSKGILQ DMW+ P+ WDW
Sbjct: 533 EEASLLNQQIFETIYFGALEASCELAQKDGTYETYEGSPVSKGILQYDMWDKTPTGLWDW 592
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 KSLKESIKQHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KN+II GS+Q I IP++++ +YKTVWEI + + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIESIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-------- 772
IDQSQS NIH+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA+AI+FTVD
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVDKKMSALKI 772
Query: 773 ---TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
V +E + E D E KMA +VCSL N++ CM+CGS
Sbjct: 773 NGQNGVKEESAQDYE--SDRERKMADMVCSLENKDACMSCGS 812
>gi|395802145|ref|ZP_10481398.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
sp. F52]
gi|395435386|gb|EJG01327.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
sp. F52]
Length = 797
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/820 (63%), Positives = 641/820 (78%), Gaps = 32/820 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGHREPVMFDKITERIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA LAAR+A+SNLH NTKKSFSET+KDMY++ N R+G APLIADD+
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHSNTKKSFSETMKDMYHYVNPRNGQDAPLIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I +NAA LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVS+GIH
Sbjct: 120 YKVIQENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+ S I+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ M++DSI+GIY+TLK+ A
Sbjct: 180 DDLKSVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQEDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+E WHADIF+FL+LKKNHGKEE RARDLF+A+W DLFM+RVQ +G W+L CPNE GL
Sbjct: 300 IETWHADIFDFLDLKKNHGKEEMRARDLFFAMWTSDLFMKRVQEDGPWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LYT YE +GK +K ++A+ LW +IL SQIETGTPYML+KD NRKSN +NL
Sbjct: 360 DVYGDEFEALYTGYEAQGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNHKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+E+TS E AVCNLASI+LP FV +N F
Sbjct: 420 GTIRSSNLCTEIMEFTSKDEIAVCNLASISLPMFV--------------------ENGEF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ E L VT VT NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI+L M F S
Sbjct: 460 NHESLYNVTKRVTRNLNKVIDRNYYPVQEAENSNMRHRPVGLGVQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S E+A +EGPY T+ SP+SKG Q +MW + S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPMSKGEFQYNMWGLKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL ++G+W+ +K +I+ +GSVQ I IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVKLGLWNEDLKQEIMRHNGSVQNINIIPQDLKDLYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M N+ K+TS+HF W GLKTGMYYLR++AA DAIKFT++ K
Sbjct: 700 GYFIDQSQSLNLFMQDANYSKLTSMHFYAWQSGLKTGMYYLRTKAAVDAIKFTLNND--K 757
Query: 778 EKPEKPELVVDDET------KMAQVVCSLTNREECMACGS 811
++ P LV E+ K + + E+C CGS
Sbjct: 758 KQETAPSLVQKTESISVEDYKAMLLKAQAADPEDCEMCGS 797
>gi|402223227|gb|EJU03292.1| ribonucleotide reductase alpha subunit [Dacryopinax sp. DJM-731
SS1]
Length = 916
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/777 (64%), Positives = 620/777 (79%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KRD R+E V FDKITAR++KL YGL +H DP +++KV AGVY GVTT +LD LA+
Sbjct: 3 YVFKRDRRKERVAFDKITARIQKLCYGLDQDHVDPFEITKKVIAGVYPGVTTVELDNLAS 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIA+SNLHK TKK FS+ I+D+Y + N ++G +P+IA DIY
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKLFSQVIEDLYTYVNPKNGRHSPMIAKDIY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+I+ +N LDS IIY+RDF + +FGFKTLERSYLL++ GKV ERPQ MLMRV+IGIH
Sbjct: 123 DIVQENKEVLDSAIIYERDFHHQFFGFKTLERSYLLRINGKVAERPQQMLMRVAIGIHGR 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID A+ TY +MS+R+FTHASPTLFNAGTP PQLSSCFLV MKDDSIEGIY+TLK CA+I
Sbjct: 183 DIDRALATYTLMSERYFTHASPTLFNAGTPHPQLSSCFLVAMKDDSIEGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+ +HNIRA GSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGMHIHNIRAKGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEFL+L+KNHGKEE RARDLFYALW+ DLFM+RV+++G WSLFCPNEA G+++
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWSLFCPNEAPGMSE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+FE LYT YEREG+A++ ++AQ LW+ IL +QIETG P+ML+KD N KSNQ+NLG
Sbjct: 363 VHSEDFEALYTRYEREGRARQTIKAQKLWYAILDAQIETGGPFMLYKDAANSKSNQKNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEI+EY++P E AVCNLASIALP F+++ +D
Sbjct: 423 TIKSSNLCTEIMEYSAPDEVAVCNLASIALPSFIQDGQ--------------------YD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
FEKL V +V NLN+IIDVNYYPV ARRSN+RHRPIG+GVQGLAD F+ L M F+SP
Sbjct: 463 FEKLHAVAKVVAFNLNRIIDVNYYPVPEARRSNMRHRPIGVGVQGLADAFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA+QLN+DIFETIY+ AL+ S+E+A +G YET+ SP S+G LQ D+W V+PSDRWDW
Sbjct: 523 EARQLNRDIFETIYHAALEASNEMAETDGAYETFEGSPASRGELQFDLWGVMPSDRWDWA 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ IS+ G+RNSLL+APMPTASTSQILGNNECFEPYTS IY+RRVL+GEF VV LL
Sbjct: 583 GLKEKISRTGLRNSLLLAPMPTASTSQILGNNECFEPYTSMIYARRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL ++G+W+ +++ II GS+Q IP IP+ +K IYKTVWEI Q ++D+A DRG +I
Sbjct: 643 RDLVDLGLWNDQMRDMIIASGGSIQNIPGIPDNIKAIYKTVWEISQKKILDLAADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FT+D SV K+
Sbjct: 703 CQSQSLNVHLQSPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTLDASVIKQ 759
>gi|213409966|ref|XP_002175753.1| ribonucleoside-diphosphate reductase large chain
[Schizosaccharomyces japonicus yFS275]
gi|212003800|gb|EEB09460.1| ribonucleoside-diphosphate reductase large chain
[Schizosaccharomyces japonicus yFS275]
Length = 824
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/844 (62%), Positives = 649/844 (76%), Gaps = 53/844 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D V+Q+V +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRKEKVQFDKITARVSRLCYGLDPEHVDAAAVTQRVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K+FS ++ +++ N ++G AP+I+D++
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTDKAFSSVVQKLHDWVNPKTGKHAPMISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEI+MK+ LDS IIYDRDF Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YEIVMKHKDELDSAIIYDRDFTYNYFGFKTLERSYLLRIDGKVAERPQHLIMRVAVGIHH 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI++AI+TY+ MSQR+FTHASPTLFNAGTPRPQLSSCFLV MKDDSIEGIYETLK CA+
Sbjct: 181 DDIEAAIETYNYMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYETLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++HNIRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGGIGINIHNIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+ +F+ L+K HGKEE RAR+LFYALW+PDLFM RV+ N QWS FCPNEA GLA
Sbjct: 301 LEPWHPDVLDFVELRKTHGKEEMRARELFYALWIPDLFMRRVEKNEQWSFFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LY YEREG+A++V+ AQ +W+EI+ +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVWGEEFEELYERYEREGRARRVLPAQKVWYEIIRAQSETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEI+EY+SP E AVCNLASIALP F+ + +
Sbjct: 421 GTIRCSNLCTEIVEYSSPDEVAVCNLASIALPMFIHDGK--------------------Y 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF++L V +VT NLN++IDVNYYPV ARRSNLRHRP+G+GVQGLAD F L +ES
Sbjct: 461 DFQQLHNVAKVVTRNLNRVIDVNYYPVPEARRSNLRHRPVGLGVQGLADAFFKLRYPYES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL+ S E+AA+EGPYETY SP S+GILQ DMWNV P+D WDW
Sbjct: 521 PEARKLNLLIFETIYHAALEASCELAAEEGPYETYEGSPASQGILQYDMWNVTPTDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 ASLKAKIAKHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W +KNK++ DGS+Q IPEIP++LK +YKTVWEI Q T++D A DRG +
Sbjct: 641 LRDLVDLGLWDEEMKNKLVLYDGSIQAIPEIPQDLKNLYKTVWEISQRTVIDYAADRGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-------- 772
IDQSQSLNIH+ P+F K+TS+HF W +GLKTGMYYLR+ AA+ AIKFTVD
Sbjct: 701 IDQSQSLNIHIKDPSFGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPLSVKQTN 760
Query: 773 --------------------TSVFKEKPEKPELVVDDETKM-----AQVVCSLTNREECM 807
++V K + E + D++ K+ + CS+ N E C
Sbjct: 761 SASAPSPAPASIRPKSSASVSAVNKNEKENEQNSSDNQEKVDIYNSKVIACSIKNPEACE 820
Query: 808 ACGS 811
C +
Sbjct: 821 MCSA 824
>gi|383451661|ref|YP_005358382.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
indicum GPTSA100-9]
gi|380503283|emb|CCG54325.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
indicum GPTSA100-9]
Length = 795
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/820 (62%), Positives = 647/820 (78%), Gaps = 34/820 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR+E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGRKEPVSFDKITDRIRILCYELN-ERVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPD+A LAARIAVSNLHKNTKKSFSET+ D+Y++ N R+G K+PL+ADD+
Sbjct: 60 AETAASMTVTHPDFAQLAARIAVSNLHKNTKKSFSETMLDLYHYVNPRTGKKSPLLADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+IM NA LDS IIY+RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVS+GIH
Sbjct: 120 YEVIMANAEKLDSTIIYNRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 NDIDAAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+ DLFM+RV+ + W+L CPNE GL
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVEADANWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LY YE GK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DVYGDEFDALYESYESAGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTS E AVCNLASI+LP F+ +N F
Sbjct: 420 GTIRSSNLCTEILEYTSEDEIAVCNLASISLPMFI--------------------ENGQF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ + L +VT +T NLN++ID NYYPVE A SN+RHRP+G+GVQGLAD FI+L M F S
Sbjct: 460 NHDHLYKVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
EA+QLN++IFETIY+ A+ S E+A +EGPY T+ SP+S+G Q +MW + SD R
Sbjct: 520 DEAKQLNQEIFETIYFAAVTASMELAKEEGPYSTFKGSPISQGEFQYNMWGLQDSDLSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLL+APMPTASTSQILGNNE FEPYTSN+Y+RRVLSGEF+VVN
Sbjct: 580 WDWSSLRKEVMEHGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNLYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL E+GIW+ +K +I+ ++GS+Q I IP+++K +Y+TVWE+ ++DM+ R
Sbjct: 640 KHLLQDLVELGIWNEELKQEIMRNNGSIQNIAGIPQDIKDLYRTVWEMSMRDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ K+ S+HF W GLKTGMYYLR++AAA+A++FTV K
Sbjct: 700 GYFIDQSQSLNLFMEGATIAKLNSMHFYAWKSGLKTGMYYLRTKAAANALQFTVA----K 755
Query: 778 EKPEKPELVVDDETKMAQVVCSLTNR------EECMACGS 811
++ +PE+V ++ A+ ++ R E+C CGS
Sbjct: 756 KQESEPEVVQVEQEMTAEEFRAMIERSKNAGPEDCEMCGS 795
>gi|241672125|ref|XP_002411450.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
gi|215504101|gb|EEC13595.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
Length = 779
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/811 (63%), Positives = 649/811 (80%), Gaps = 32/811 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++ + GR+E VHFDKIT+R++KL YGL+ + DP L++QKV G+Y GVTT +LD LA
Sbjct: 1 IFYIVSGGRRETVHFDKITSRIQKLCYGLNMDFVDPCLITQKVINGLYPGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIA+SNLHK TKK FSE ++D+YN +E++ L+ P+I+D+
Sbjct: 61 AETAATMTTKHPDYAILAARIAISNLHKETKKVFSEVVEDLYNMVSEKTRLRTPMISDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M+NA +S IIYDRDF+Y++FGFKTLERSYLLK+ GKVVERPQHMLMRVS+GIH
Sbjct: 121 YKIVMENAEAFNSAIIYDRDFNYNFFGFKTLERSYLLKINGKVVERPQHMLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++S + TY++MS++WFTHASPTLFN+GTPRPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 ADVESVLNTYNLMSEKWFTHASPTLFNSGTPRPQLSSCFLLQMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IRA+GSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNIHCIRASGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+FL+LKKN GKEE+RARDLFYALW+PDLFM RV+ + WSL CP+E GL
Sbjct: 301 LEPWHADVFDFLDLKKNTGKEENRARDLFYALWIPDLFMRRVEQDQMWSLMCPHECPGLH 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G +FEKLYT YE E + ++ VQAQ LW+ IL SQIETGTPYML+KD CN KSNQ+NL
Sbjct: 361 EVYGEDFEKLYTKYEGEKRYRRQVQAQQLWYAILESQIETGTPYMLYKDACNSKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTE+IEYT+P E AVCNLASIAL RFV E GS F
Sbjct: 421 GTIKCSNLCTEVIEYTAPDEVAVCNLASIALNRFVHE-------------GS-------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV+ ++T+NLN+IID+N+YP+ A +SN HRPIGIGVQGLADTFILL + F+
Sbjct: 461 DFQKLREVSQVITKNLNRIIDINFYPIPEAEKSNKSHRPIGIGVQGLADTFILLRLPFDC 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A+ LNK IFETIYY AL+ S ++A + GPYETY PVS+GILQ DMW V P+D WDW
Sbjct: 521 EKARLLNKQIFETIYYGALEASCDLAKELGPYETYPGCPVSQGILQYDMWGVTPTDMWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSGEF VVN+HL
Sbjct: 581 AALKARIAQYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQVVNQHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT+ G+W+ +KN +I ++GSVQ++ +IP++LK +Y+TVWEI Q ++ MA DRG +
Sbjct: 641 LKDLTDRGLWNEDLKNSLIANNGSVQEL-DIPDDLKELYRTVWEIPQKNILQMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
+DQSQSLN+H+ QPN+ K+TS+HF W GLKTGMYYLR++ AA AI+FTVD + ++K
Sbjct: 700 VDQSQSLNVHIAQPNYGKLTSMHFFGWKLGLKTGMYYLRTKPAASAIQFTVDKTALRKKE 759
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ M V CSL N++EC+ C +
Sbjct: 760 Q-----------MNAVTCSLKNKDECLMCSA 779
>gi|296421726|ref|XP_002840415.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636631|emb|CAZ84606.1| unnamed protein product [Tuber melanosporum]
Length = 884
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/778 (65%), Positives = 625/778 (80%), Gaps = 22/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRD R+E V FDKITAR+ +L YGL +EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVVKRDNRKERVQFDKITARVSRLCYGLDSEHVDAATITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS+ I D+Y++ N ++G A +I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSQVISDLYHYVNPKNGRPASMISTET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++A+ LDS IIYD+DF+Y+YFGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 121 YETVMRHASELDSAIIYDKDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D I+TY++ S ++FTHASPTLFNAGTP PQLSSCFLV MK DSI+GIY+TLK CA+
Sbjct: 181 EDVDKVIETYNLTSSKYFTHASPTLFNAGTPSPQLSSCFLVTMKGDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATGSYI GTNG+SNGIVPMLRVFN TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHCIRATGSYIAGTNGSSNGIVPMLRVFNHTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+F++L+KNHGKEE RARDLFYALW+PDLFM+RV+ N +WSLFCPNEA GLA
Sbjct: 301 MEPWHADIFDFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANAEWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYER-EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
D WG EFE LY YE + A+K ++AQ LW+ IL +Q ETG P+ML+KD CNRKSNQQN
Sbjct: 361 DVWGEEFEALYNKYENTKDLARKTIKAQKLWYHILEAQTETGNPFMLYKDACNRKSNQQN 420
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LGTI+SSNLCTEI+EY++P E AVCNLAS+ALP +V DV RG
Sbjct: 421 LGTIRSSNLCTEIVEYSAPDEVAVCNLASLALPTYV---DV-----------QRGE---- 462
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
+DF KL EVT +V +NLNKIIDVN+YPV AR+SN RHRP+G+GVQGLAD F+ L M FE
Sbjct: 463 YDFAKLHEVTKVVIKNLNKIIDVNFYPVPEARKSNTRHRPVGVGVQGLADAFLALRMPFE 522
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
SP+A+QLN IFETIY+ A++ S+E+A +GPY TY SP SKG LQ D+WNV P++ WD
Sbjct: 523 SPQAKQLNIQIFETIYHAAVEASTELAEIQGPYPTYEGSPASKGQLQYDLWNVTPTELWD 582
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN
Sbjct: 583 WDELKEKVKKHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPW 642
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL +MG+WS +KN+II ++GS+Q IP IP+++K +YKTVWEI Q ++++ G
Sbjct: 643 LLKDLVDMGLWSDNMKNRIIAENGSIQNIPNIPDDIKALYKTVWEISQKKVIEVC---GA 699
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
+IDQSQSLNIH+ P K+TS+HF W GLKTGMYYLR++AAA AI+FTVD K
Sbjct: 700 FIDQSQSLNIHIQNPTMGKLTSMHFYGWRLGLKTGMYYLRTQAAAAAIQFTVDQEALK 757
>gi|223999029|ref|XP_002289187.1| ribonucleotide reductase large chain subunit [Thalassiosira
pseudonana CCMP1335]
gi|220974395|gb|EED92724.1| ribonucleotide reductase large chain subunit [Thalassiosira
pseudonana CCMP1335]
Length = 813
Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/829 (60%), Positives = 639/829 (77%), Gaps = 34/829 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG++++ FDKI +R+ KL YGL + + ++SQKV GVY GVTT++LDELA
Sbjct: 1 MYVVKRDGKKQSCQFDKIQSRISKLCYGLDQKFVNEAVISQKVIQGVYPGVTTTELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+TAA+ +T HPDYA LAARI VSNLHK T+K FS+ ++ YN+ + ++G APL++ ++
Sbjct: 61 AQTAASFSTQHPDYAVLAARIEVSNLHKETEKQFSKVVEAFYNYTHPKTGEPAPLVSKEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++ N LD +I+DRDF++DYFG+KTLE+SYLLK+ G++ ERPQHMLMRVS+GIH
Sbjct: 121 YDVVNANKDVLDGAVIHDRDFEFDYFGYKTLEKSYLLKLHGEIAERPQHMLMRVSVGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+ ++TY+++SQR+FTHA+PTLFNAGTP PQ+SSCFL C+K DSI+GIY+TLK CAV
Sbjct: 181 GDIERVLETYNLLSQRFFTHATPTLFNAGTPNPQMSSCFLTCIKADSIDGIYDTLKNCAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ N+RA+ SYIRGTNGTSNGIVPMLRVFN+TARYVDQGGGKRKG+ A Y
Sbjct: 241 ISKYAGGIGMSISNVRASASYIRGTNGTSNGIVPMLRVFNNTARYVDQGGGKRKGSIAAY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF FL+L+KNHG E RARDLFYALW+PDLFM+RV+ NG W+L CPNE GL
Sbjct: 301 IEPWHADIFAFLDLRKNHGNEMERARDLFYALWIPDLFMQRVEQNGDWTLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
CWG EF+ LY YEREGK +K ++AQ LWF +L SQ+ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 TCWGEEFKTLYEKYEREGKGRKTIKAQQLWFAVLDSQVETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYT+P E AVCNLASI+L +FV P+ G G F
Sbjct: 421 GTIKCSNLCTEIVEYTAPDEIAVCNLASISLSKFVT---------PADNFGGEGH----F 467
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D E L ++ +VT+NLN++ID N+YPVE ARRSN+RHRPIGIGVQGLAD F+++ + FES
Sbjct: 468 DLENLKHISKVVTKNLNRVIDRNFYPVEEARRSNMRHRPIGIGVQGLADAFMMMKLPFES 527
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLNKDIFETIY+ A + S E+A +EGPYETY SP SKG LQ DMW V PS+ WDW
Sbjct: 528 PEARQLNKDIFETIYFGACEASMELAEQEGPYETYEGSPASKGQLQFDMWGVEPSNLWDW 587
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++G+RNSLL+APMPTAST+QILGNNE EP+TSN+Y+RRVL+GEF +VNKHL
Sbjct: 588 AGLKAKIAQHGMRNSLLMAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTIVNKHL 647
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L +LT G+W+ ++N+II GSVQ + +IP+ ++ +YKTVWEI Q ++DMA DRG +
Sbjct: 648 LRELTANGLWTERVRNQIIAQGGSVQAVADIPKSIRDVYKTVWEIPQRAILDMAADRGAF 707
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQS+N+H+ +P+ K+TS+HF W +GLKTGMYYLR+R ADAI+FTV+ + E
Sbjct: 708 ICQSQSMNVHIGEPSTSKLTSMHFYAWKKGLKTGMYYLRTRPKADAIQFTVNQEMLAEST 767
Query: 781 EKPELVVDDETKMAQVVCSLT------------------NREECMACGS 811
KP D+ + S+T EEC+ CG+
Sbjct: 768 SKP---AQDQLERNPSPTSVTAAGKVSVNSKFAGLQMKDEEEECLNCGA 813
>gi|328864042|gb|EGG13141.1| hypothetical protein MELLADRAFT_41450 [Melampsora larici-populina
98AG31]
Length = 871
Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/777 (64%), Positives = 621/777 (79%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V KRDGR+E V FDKITAR+ KL YGL H +P+ +++KV GV+ GVTT +LD LAA
Sbjct: 3 FVYKRDGRRERVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA MTT HPDYA LAARIA+SNLHK TKK FS+ I+D+Y + N ++G +P+I+D+ Y
Sbjct: 63 ETAAYMTTRHPDYAVLAARIAISNLHKETKKLFSQVIEDLYRYVNPKNGRPSPMISDETY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
E + NA L+S +IYDRDF+Y+YFGFKTLERSYLL++ KV ERPQHMLMRV++GIH
Sbjct: 123 EAVQANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRIDNKVAERPQHMLMRVAVGIHGT 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
D+D AI+TY++MS+++FTHASPTLFN+GTP PQLSSCFLV MK DSI+GIY+TLK CA+I
Sbjct: 183 DVDRAIRTYNLMSEKYFTHASPTLFNSGTPHPQLSSCFLVSMKSDSIDGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H+IRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLNIHDIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+F++L+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG W LFCP EA GL+D
Sbjct: 303 EPWHADVFDWLDLRKNHGKEESRARDLFYALWIPDLFMQRVEDNGDWPLFCPAEAPGLSD 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G FEKL+ YE+EG+AKK V+AQ LW+ IL +Q ETG P+ML+KD NRKSNQ+NLG
Sbjct: 363 VYGEAFEKLFDQYEKEGRAKKTVKAQKLWYAILEAQTETGNPFMLYKDAANRKSNQKNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY++P E AVCNLASIALP ++ + +D
Sbjct: 423 TIKSSNLCTEIIEYSAPDEVAVCNLASIALPTYITDG--------------------VYD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL EVT VT NLN+IIDVNYYPV A++SN+RHRPIGIGV GLAD F +L + F+SP
Sbjct: 463 FQKLHEVTKEVTWNLNRIIDVNYYPVPEAKKSNMRHRPIGIGVNGLADAFQILKLPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA++LN IFET+Y+ AL+ S+E+A EG YET+ SP S G LQ DMW V PSD W W
Sbjct: 523 EAKKLNAQIFETLYHAALEASNELAVAEGAYETFPGSPASLGELQYDMWGVTPSDLWKWD 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I G+RNSLL+APMPTASTSQI+G NECFEPYTSNIY+RRVL+GEF +VN LL
Sbjct: 583 DLKERIKATGLRNSLLLAPMPTASTSQIMGFNECFEPYTSNIYTRRVLAGEFQIVNPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L EMG+W+ +KN+II GS+Q IP+IP ++K +YKTVWEI Q ++D+A DRG +I
Sbjct: 643 KELVEMGLWNDEMKNRIIAHQGSIQNIPDIPTKMKAVYKTVWEISQKVIIDLAADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
DQSQSLNIH+ P F ++TS+HF W +GLKTGMYYLR+RAAA+AI+FTVD + E
Sbjct: 703 DQSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKLQDE 759
>gi|299743194|ref|XP_001835601.2| hypothetical protein CC1G_03383 [Coprinopsis cinerea okayama7#130]
gi|298405544|gb|EAU86172.2| hypothetical protein CC1G_03383 [Coprinopsis cinerea okayama7#130]
Length = 895
Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/788 (64%), Positives = 625/788 (79%), Gaps = 25/788 (3%)
Query: 2 YVVKRD-----GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQL 56
YV KR R+E V FDKITAR+ KL YGL DP+ V+QKV GVY+GVTT +L
Sbjct: 22 YVFKRGPDASYSRKERVQFDKITARISKLCYGLDLNFVDPIEVAQKVVVGVYQGVTTVEL 81
Query: 57 DELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLI 116
D LAAETAA +TT HPDYA LAARIAVSNLHK TKKSFS+ +KD+Y + N ++G A +I
Sbjct: 82 DNLAAETAAYLTTKHPDYAVLAARIAVSNLHKETKKSFSQVMKDLYEYVNPKNGKPAGMI 141
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ + +E+I NA LDS IIY+RDF+Y+YFGFKTLERSYLL++ G+V ERPQHM+MRV++
Sbjct: 142 SKETWEVIRDNADTLDSAIIYNRDFNYNYFGFKTLERSYLLRLNGRVAERPQHMIMRVAV 201
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
GIH DID ++TY++MS+R+FTHASPTLFNAGTP PQLSSCFLVCMKDDSIEGIY+TLK
Sbjct: 202 GIHGRDIDRVLETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLK 261
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
CA+ISK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GA
Sbjct: 262 NCAMISKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGA 321
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
FA+Y+EPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ +G+WSLFCPNEA
Sbjct: 322 FAIYIEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEADGEWSLFCPNEA 381
Query: 357 SGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSN 416
GL D AEFE+LY YE+EG+A+K ++AQ LW+ IL +QIETG P+M++KD N KSN
Sbjct: 382 PGLHDVHSAEFEELYERYEKEGRARKTIRAQKLWYAILEAQIETGGPFMVYKDHANAKSN 441
Query: 417 QQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSK 476
Q+NLGTIKSSNLCTEIIEY+SP ETAVCNLAS+ALP F+ K
Sbjct: 442 QKNLGTIKSSNLCTEIIEYSSPDETAVCNLASLALPTFI--------------------K 481
Query: 477 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+ +DF+KL EVT +VT NLN+IIDVNYYP+ ARRSN+RHRPIGIGVQGLAD F+ L M
Sbjct: 482 DGVYDFKKLHEVTKVVTYNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADAFMALRM 541
Query: 537 AFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD 596
F+S A++LN IFETIY+ AL+ SSEIAA++GPYET+ SP S+G LQ D+W V PSD
Sbjct: 542 PFDSQAAKELNLQIFETIYHAALEASSEIAARDGPYETWEGSPASQGQLQYDLWGVKPSD 601
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
WDW L+ I+K G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV
Sbjct: 602 LWDWASLKAQIAKTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVV 661
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
LL +L ++G+W +KN II +GSVQ IP IP ++K IYKTVWEI Q ++D+A D
Sbjct: 662 CPWLLRELVDLGLWDDNMKNLIIAHNGSVQNIPNIPADVKAIYKTVWEISQKKVIDLAAD 721
Query: 717 RGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
RG +I QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD S+
Sbjct: 722 RGAFICQSQSLNVHLSAPTMGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSLL 781
Query: 777 KEKPEKPE 784
K E+ +
Sbjct: 782 KAAKEQTQ 789
>gi|388582671|gb|EIM22975.1| hypothetical protein WALSEDRAFT_31633 [Wallemia sebi CBS 633.66]
Length = 888
Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/790 (64%), Positives = 625/790 (79%), Gaps = 27/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KRDGR+E+V FDKITAR+ KL YGL + H DP+ +++KV GV++G+TT +LD LA
Sbjct: 4 MTVFKRDGRKESVAFDKITARINKLCYGLDSNHVDPIEITKKVVQGVHQGITTVELDNLA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +T HPDYA LAARIA+SNLHK TKK+FS I+D+YN+ N R+G P+I+D+
Sbjct: 64 AETAAYLTVKHPDYAVLAARIAISNLHKETKKAFSAVIEDLYNYVNPRNGKPGPMISDET 123
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+MKN LDS I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 124 YQIVMKNRNVLDSAILYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ I+TY++MS + FTHASPTLFNAGTP PQ+SSCFLV M+DDSIEGIY+TLK CA+
Sbjct: 184 SDLERVIETYNLMSLKAFTHASPTLFNAGTPHPQMSSCFLVTMQDDSIEGIYDTLKSCAL 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATGSYI GTNG+SNGIVPMLR F+ TARYVDQGG KR GAFA+Y
Sbjct: 244 ISKTAGGIGLNIHCIRATGSYIAGTNGSSNGIVPMLRAFDATARYVDQGGNKRPGAFAIY 303
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+RVQ NG W LFCP+EA GL
Sbjct: 304 LEPWHPDVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMQRVQENGDWPLFCPHEAPGLH 363
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+L+ YEREG+AK+VV+AQ LW+ IL SQ+ETG P+ML+KD N KSNQQNL
Sbjct: 364 EVWGKEFEELFFKYEREGRAKRVVKAQKLWYSILDSQVETGGPFMLYKDHANAKSNQQNL 423
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK+SNLCTEIIEY++P E AVCNLASIALP ++ KN F
Sbjct: 424 GTIKNSNLCTEIIEYSAPDEVAVCNLASIALPSYI--------------------KNGQF 463
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF +L +VT ++T NLN+IIDVNYYPV+ A SN+RHRPIG+GVQGLAD F LL F S
Sbjct: 464 DFNELHKVTKVLTRNLNRIIDVNYYPVKEAYNSNMRHRPIGLGVQGLADAFQLLRFPFSS 523
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LNK IFETIY+ A+++SSE+A + G YE+YH SP SKG LQ D+WNV P+ WDW
Sbjct: 524 EEARLLNKQIFETIYHAAVESSSELAQEFGVYESYHGSPASKGQLQYDLWNVTPTGLWDW 583
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ +++ G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVLSGEF +VN L
Sbjct: 584 TSLKEKVAQRGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLSGEFQIVNPWL 643
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + G+W+ T+KN+II GSVQ I +IP+++K +YKTVWEI Q ++D+A DRG +
Sbjct: 644 LKDLCDRGLWNDTMKNRIIAHGGSVQNISDIPDDIKELYKTVWEISQKVIIDLAADRGAF 703
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQSLN+H+ P ++TS+HF RGLKTGMYYLR+R + AI+FTVD +E
Sbjct: 704 IDQSQSLNVHLASPTHAQLTSMHFYAHRRGLKTGMYYLRTRPQSAAIQFTVDKQALEEAK 763
Query: 779 -----KPEKP 783
KP P
Sbjct: 764 ATQKSKPSTP 773
>gi|384097000|ref|ZP_09998121.1| ribonucleoside-diphosphate reductase, large subunit [Imtechella
halotolerans K1]
gi|383836968|gb|EID76368.1| ribonucleoside-diphosphate reductase, large subunit [Imtechella
halotolerans K1]
Length = 793
Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/814 (62%), Positives = 638/814 (78%), Gaps = 24/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGRQE V FDKITAR++KL YGL+ + DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVLKRDGRQEPVMFDKITARVRKLCYGLN-DLVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI+VSNLHKNTKKSFSET+ D+YN+ N R+ APLI+D++
Sbjct: 60 AEIAATMTTTHPDYARLAARISVSNLHKNTKKSFSETMNDLYNYVNPRTEQAAPLISDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++II NA LDS IIY+RDF YDYFGFKTLERSYLLK+ G +VERPQHMLMRV++GIH
Sbjct: 120 HDIIQANADFLDSTIIYNRDFGYDYFGFKTLERSYLLKINGNIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++S ++TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 DDMESVVETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADI +FL+LKKNHGKEE RARDLFYA+W+PDLFM+RVQ + +W+L CPNE GL
Sbjct: 300 IEPWHADIMDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVQEDSRWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D FE+LY YE EGK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DVHSDSFEELYLRYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLAS+ALP FV KN F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASVALPMFV--------------------KNGEF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +VT VT NLN++ID NYYPV A+ SN RHRP+G+GVQGLADTFI+L M F S
Sbjct: 460 DHKELFKVTKRVTRNLNRVIDRNYYPVIEAQNSNFRHRPVGLGVQGLADTFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S E+A +EGPY+T+ SP+S+G Q +MW + S R
Sbjct: 520 DEAKKLNQEIFETMYFAAVTASMELAKEEGPYDTFKGSPISQGEFQHNMWGIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAKLRKDVIKNGVRNSLLMAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL +G+W+ +K +I+ +GS+Q+I IP E+K +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVALGLWNEDLKQEIMRANGSIQEIDIIPHEIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ K+TS+HF W GLKTGMYYLR+++A DAIKFTV
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTVQKKQET 759
Query: 778 EKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + + DE K + ++C+ CGS
Sbjct: 760 KPTAESQPLTSDELKAMIAQAKASEGDDCLMCGS 793
>gi|187608195|ref|NP_001120566.1| ribonucleotide reductase M1 [Xenopus (Silurana) tropicalis]
gi|171847253|gb|AAI61529.1| LOC100145720 protein [Xenopus (Silurana) tropicalis]
Length = 797
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/820 (64%), Positives = 651/820 (79%), Gaps = 32/820 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYNGVTTIELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P+++ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKIFSDVMEDLYNYVNPLNGKHSPMVSKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++++ N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDLVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKIDGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+CMKDDSIEGIY+TLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+FEFL+LKKN GKEE RARDLFYA+W+PDLFM+RV+ N WSL CP+E GL
Sbjct: 301 LEPWHYDVFEFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLE 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG +FE+LY YEREG+A+KVV+AQ LW+ I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 EVWGDKFEELYERYEREGRARKVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSDDEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA+VT ++ NLNKII++N+YPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL++S E+A + GPY+TY SPVSKGILQ DMWNV P+ WDW
Sbjct: 522 EEAQLLNKQIFETIYYAALESSCELAKELGPYDTYEGSPVSKGILQYDMWNVTPTGLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 AALKEKIAKYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DLTE G+W+ +KN+II ++GS+Q +P+IP +LK +YKTVWEI Q T++ MA DRG +
Sbjct: 642 MKDLTERGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ KEK
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFFGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEK- 760
Query: 781 EKPELV---------VDDETKMAQVVCSLTNREECMACGS 811
EL+ + E A +VCSL NR+EC+ CGS
Sbjct: 761 ---ELISKETMEKDKEEKEKNKAAMVCSLENRDECLMCGS 797
>gi|332876815|ref|ZP_08444572.1| ribonucleoside-diphosphate reductase, alpha subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|332685241|gb|EGJ58081.1| ribonucleoside-diphosphate reductase, alpha subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
Length = 777
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/811 (63%), Positives = 647/811 (79%), Gaps = 34/811 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G++EAVHFDKITAR+ KL YGLS D + +++KV G+Y +TT++LD LA
Sbjct: 1 MFVIKRNGKKEAVHFDKITARIHKLIYGLSISEKDVIEIAKKVIQGIYDNITTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA TT HPD++ LAARIAVSNLHKNT KSFS+T + +Y + + + APLI+++I
Sbjct: 61 AETAAAQTTIHPDFSVLAARIAVSNLHKNTLKSFSKTAQLLYEYTDPITQTHAPLISEEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II KNA LDS +IYDRD+++DYFGFKTLERSYL++ GKV ERPQH+ MRV++GI+K
Sbjct: 121 YKIIRKNADELDSSVIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIYK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI+TY++MS++WF HA+PTLFNAGTP+PQ+SSCFL+ M +DSI GI++TLK CA+
Sbjct: 181 EDIQAAIETYNLMSEKWFIHATPTLFNAGTPKPQMSSCFLLSMTEDSIAGIFDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIGVS+HNIR+TGSYI+GT G SNGI+PMLRVFNDTARYVDQGGGKRKGA AVY
Sbjct: 241 ISQSAGGIGVSIHNIRSTGSYIKGTGGISNGIIPMLRVFNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH DIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ + WSLF PNEA GL
Sbjct: 301 IEPWHLDIFDFIDIRKNHGKEEMRARDLFPALWIPDLFMQRVEADQMWSLFDPNEAQGLY 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G +F +LYT YE EGK +K ++A+ LW IL +QIETGTPYM +KD N KSNQ+N+
Sbjct: 361 EVYGEKFNELYTTYENEGKFRKQIKARELWTAILEAQIETGTPYMCYKDAVNEKSNQKNI 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+ E AVCNLAS+ALPR+V S G F
Sbjct: 421 GTIRSSNLCTEIMEYTNADEVAVCNLASLALPRYV----------------SSGG----F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT IVT NLNKIID NYYP+ + SN RHRPIG+GVQGLAD F+LL + FES
Sbjct: 461 DFQKLYEVTKIVTRNLNKIIDGNYYPIPETKTSNDRHRPIGLGVQGLADVFLLLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LNKDIFETIY+ +++ S ++A ++G Y ++ SP+S+G Q D+W V+PSDRWDW
Sbjct: 521 PEARRLNKDIFETIYFASMEASMDLAKEQGAYSSFAGSPLSEGKFQFDLWQVVPSDRWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK L
Sbjct: 581 EKLRQEVMTHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKFL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+G+W+PT+KNK+I ++GSVQ IPEIP ELK +YKTVWEIKQ T++DMA +RG +
Sbjct: 641 LKDLIELGLWNPTMKNKLIAENGSVQNIPEIPTELKELYKTVWEIKQKTIIDMAAERGAF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLN+ M +PN K+TS+HF W GLKTGMYYLR++AA DAIKFTVDT +
Sbjct: 701 ICQSQSLNLFMAEPNLAKLTSMHFHAWKSGLKTGMYYLRTKAAVDAIKFTVDTQLL---- 756
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+QV CSL N EEC+ACGS
Sbjct: 757 ----------LGQSQVACSLDNPEECLACGS 777
>gi|120437795|ref|YP_863481.1| ribonucleoside-diphosphate reductase large chain [Gramella forsetii
KT0803]
gi|117579945|emb|CAL68414.1| ribonucleoside-diphosphate reductase large chain [Gramella forsetii
KT0803]
Length = 819
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/792 (64%), Positives = 635/792 (80%), Gaps = 28/792 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR+E V FDKITAR+KKL YGL+ E DPV V+ +V G+Y VTTS+LD LA
Sbjct: 1 MYVVKRDGRKEPVMFDKITARVKKLCYGLN-ELVDPVKVAMRVIEGLYDNVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT+HPDYA LAARI+VSNLHKNTKK+FSE + D+Y + N R+G KAPL++D++
Sbjct: 60 AEIAATMTTSHPDYAKLAARISVSNLHKNTKKTFSEVMTDLYEYVNPRTGEKAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I++N LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVSIGIH
Sbjct: 120 YKVIIENKEKLDSTIIYNRDFSYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+D+AI+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 DDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+PDLFM+RV+ N +W+L CP E GL
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMPDLFMKRVEQNEKWTLMCPQECPGLF 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEKLY YE E K +K ++A+ LW +I SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DTYGEEFEKLYEKYEAENKGRKTIKARELWEKITESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP F++ + F
Sbjct: 420 GTIRSSNLCTEILEYTSPDEVAVCNLASIALPMFIKGNE--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L ++T VT+NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLADTFI L M F S
Sbjct: 460 DHKELFKITKRVTKNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADTFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
+A++LN++IFET+Y+ A+ S E+A +EGPY T+ SP+S+G Q ++W + D R
Sbjct: 520 DKAKKLNQEIFETLYFAAVTASMELAKEEGPYSTFKGSPISEGEFQYNLWGIKDEDLSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDWG LR + K GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWGKLRKQVMKEGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL +W +KN I+ ++GSVQ I IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVSRNLWDDEVKNAIMRNNGSVQDIDIIPDDLKELYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR+++A DAIKFT++ K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLE----K 755
Query: 778 EKPEKPELVVDD 789
EK ++P + V +
Sbjct: 756 EKKKEPIVAVSE 767
>gi|443896993|dbj|GAC74335.1| hypothetical protein PANT_11d00009 [Pseudozyma antarctica T-34]
Length = 1291
Score = 1092 bits (2824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/778 (64%), Positives = 626/778 (80%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV KRDGR+E V FDK+TAR+ KL YGL + DP+ +++KV G+Y+GVTT +LD LA
Sbjct: 2 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIDGIYEGVTTVELDNLA 61
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA TT HPDYA LAARIA+SNLHK T K+FS+ ++ +Y++ N ++G +P+I+D
Sbjct: 62 AETAAYKTTTHPDYAVLAARIAISNLHKETSKNFSQVVQALYDYINPKNGRHSPMISDAT 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M + LDS IIY+RDF Y++FGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 122 YKVVMAHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAI+TY++MSQ++FTHASPTLFNAGTP PQLSSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 182 EDIESAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+D+FEFL+L+KNHGKEE RAR+LFYALWVPDLFM+RV+ NG WSL CPNE GLA
Sbjct: 302 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 361
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY YE EG++K+ V+AQ LW+ IL SQ ETG P++L+KD NRKSNQ+NL
Sbjct: 362 DCYGDEFERLYERYEAEGRSKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEIIEY+SP E AVCNLASIALP F+ PV ++ +
Sbjct: 422 GTIKCSNLCTEIIEYSSPDEVAVCNLASIALPTFID----PV--------------SKTY 463
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF++L V + +NLNKIID+NYYPVE ARRSN+RHRPIGIGVQGLAD F+++G AFES
Sbjct: 464 DFKRLHSVAKAICKNLNKIIDINYYPVEEARRSNMRHRPIGIGVQGLADAFMIMGYAFES 523
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL+ S E+A + G YETY SP S+G LQ DMW V PSD WDW
Sbjct: 524 PEARKLNVQIFETIYHAALERSCELAQQHGTYETYAGSPASQGELQYDMWGVTPSDLWDW 583
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++G+RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 584 AELKAKIAQHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L +L E G+W+ T+KN+II GS+Q +P IP+ +K +YKTVWEI Q ++DMA DRG +
Sbjct: 644 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPDRIKKLYKTVWEISQKAIIDMAADRGAF 703
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
I QSQSLNIH+ P F ++TS+HF W +GLKTG YYLR++ A++A++FT+ + E
Sbjct: 704 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAVQFTLSVAEVNE 761
>gi|388855438|emb|CCF50884.1| probable RNR1-ribonucleoside-diphosphate reductase large subunit
[Ustilago hordei]
Length = 892
Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/778 (64%), Positives = 624/778 (80%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV KRDGR+E V FDK+TAR+ KL YGL + DP+ +++KV G+Y+GVTT +LD LA
Sbjct: 2 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIDGIYEGVTTVELDNLA 61
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA TT HPDYA LAARIA+SNLHK T K+FS+ ++D+Y + N ++ +P+I+D
Sbjct: 62 AETAAYKTTTHPDYAVLAARIAISNLHKETSKNFSQVVQDLYEYVNPKNRRHSPMISDAT 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M++ LDS IIY+RDF Y++FGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 122 YKVVMQHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+SAI+TY++MSQ++FTHASPTLFNAGTP PQLSSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 182 QDIESAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+D+FEFL+L+KNHGKEE RAR+LFYALWVPDLFM+RV+ NG WSL CPNE GLA
Sbjct: 302 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 361
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY YE EG+ K+ V+AQ LW+ IL SQ ETG P++L+KD NRKSNQ+NL
Sbjct: 362 DCYGDEFERLYERYEAEGRCKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEIIEY++P E AVCNLASIALP F+ PV + +
Sbjct: 422 GTIKCSNLCTEIIEYSAPDEVAVCNLASIALPTFID----PV--------------TKVY 463
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF++L EV + +NLNKIID+NYYPVE ARRSN+RHRPIGIGVQGLAD F+++G AFES
Sbjct: 464 DFKRLHEVAKAICKNLNKIIDINYYPVEEARRSNMRHRPIGIGVQGLADAFMIMGYAFES 523
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL+ S E+A + G YETY SP S+G LQ DMW V PSD WDW
Sbjct: 524 PEARRLNVQIFETIYHAALERSCELAQEHGTYETYQGSPASQGELQYDMWGVTPSDLWDW 583
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 584 ASLKANIAKHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L +L E G+W+ T+KN+II GS+Q +P IP+ +K +YKTVWEI Q ++DMA DRG +
Sbjct: 644 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPDRIKKLYKTVWEISQKAIIDMAADRGAF 703
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
I QSQSLNIH+ P F ++TS+HF W +GLKTG YYLR++ A++A++FT+ + E
Sbjct: 704 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAVQFTLSVAEVNE 761
>gi|453080262|gb|EMF08313.1| ribonucleoside-diphosphate reductase large chain [Mycosphaerella
populorum SO2202]
Length = 914
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/777 (65%), Positives = 623/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++ KV GVY+GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDSTAITMKVINGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS + D+Y + N ++ +P+I+D
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYTYVNPKNNKPSPMISDYT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M++A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YKVVMEHADELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI++AI+TY+ MS ++FTHASPTLF+AGTP QL+SCFL+ MKDDSIEGIY+TLK CA+
Sbjct: 181 DDIEAAIETYNYMSNKYFTHASPTLFSAGTPNAQLASCFLIDMKDDSIEGIYDTLKICAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++ H IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNCHKIRATGSYIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ F++L+KNHGKEE RARDLF+ALW+PDLFM+RV+ N +W+L CPNE GLA
Sbjct: 301 LEPWHADVISFMDLRKNHGKEEVRARDLFFALWIPDLFMKRVEQNAEWTLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YE+EG+ ++ V+AQ +W+ IL +Q ETG P++L+KD NRKSNQ+NL
Sbjct: 361 DVYGDEFEELYTRYEKEGRGRETVRAQKVWYAILEAQTETGGPFILYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT+P E AVCNLAS+ALP +V D+ +N F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASLALPTYV---DL---------------ENEKF 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV +VT+NLNKII+VN+YPV A++SN+RHRPIG+GV GLAD F+ L M FES
Sbjct: 463 DFQKLHEVVQVVTKNLNKIIEVNHYPVPEAKKSNMRHRPIGLGVSGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S ++A K GPYETY SPVSKG LQ DMW V PSD WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDLAKKLGPYETYEGSPVSKGELQYDMWGVTPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKAKIAEHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + G+WS +KN+II D GS+Q+IP I ++LK +YKTVWEI Q +V MA DRG +
Sbjct: 643 LKDLVDRGLWSENMKNRIIADGGSIQRIPNIGDDLKALYKTVWEISQRNIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR++AA+ I+FTVD + K
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTQAASAPIQFTVDQEMLK 759
>gi|50426387|ref|XP_461790.1| DEHA2G05610p [Debaryomyces hansenii CBS767]
gi|49657460|emb|CAG90249.1| DEHA2G05610p [Debaryomyces hansenii CBS767]
Length = 867
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/772 (64%), Positives = 624/772 (80%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL T H +PV ++Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDTTHVEPVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K FS+ K++Y + N ++ L +P+I+ D
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVSKELYEYVNPKTDLHSPMISKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II NA L+S I++DRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YDIIQANANELNSAIVFDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ I++Y+MMS R+FTH SPTLFNAGTP PQ+SSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 181 NDIERVIESYNMMSLRYFTHGSPTLFNAGTPSPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAKGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YE+E + + VV+AQ LW+ IL +Q ETGTP+ML+KD CN+K+NQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKENRGRSVVKAQKLWYAILDAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P E AVCNLASIALP FV + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPAFV----------------DKNNTTSWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL EVT +VT NLN+IID NYYPV AR SN+R+RPI +GVQGLAD F+ L + F+S
Sbjct: 465 DFEKLHEVTKVVTRNLNRIIDRNYYPVPEARNSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A EGPY+TY SP SKGILQ D+W P++ WDW
Sbjct: 525 QEAKELNTQIFETIYHGAVEASIELAEIEGPYQTYEGSPASKGILQFDLWERKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQKLAKHGIRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ +KN II ++GS+Q +P IP+ELK +YKTVWEI Q ++DMA DR +
Sbjct: 645 LRDLVDLGIWNDDMKNNIISNNGSIQTLPNIPDELKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|163753570|ref|ZP_02160693.1| ribonucleoside diphosphate reductase, alpha subunit [Kordia
algicida OT-1]
gi|161325784|gb|EDP97110.1| ribonucleoside diphosphate reductase, alpha subunit [Kordia
algicida OT-1]
Length = 812
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/833 (62%), Positives = 642/833 (77%), Gaps = 43/833 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR+E + FDKIT+R++KL YGL+ DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGRKEPMMFDKITSRVRKLCYGLNN-LVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI+VSNLHKNTKKSFSET+ D+Y + N R+G KAPL++D++
Sbjct: 60 AEIAATMTTTHPDYARLAARISVSNLHKNTKKSFSETMVDLYEYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +IM+NA LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVS+GIH
Sbjct: 120 YNVIMENADRLDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D+AI+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 NDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+PDLFM+RV+ NG W+L CPNE L
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEENGPWTLMCPNECPNLF 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ EFE LY YE EGK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 NVHSEEFEALYLKYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP F++ + F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFIKGGE--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L VT VT+NLNK+ID NYYPV+ A SN RHRPIG+GVQGLADTFI L M F S
Sbjct: 460 DHKELFRVTKRVTKNLNKVIDRNYYPVKEAENSNFRHRPIGLGVQGLADTFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S E+A EGPY+TY SP+SKG Q ++W + S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKIEGPYQTYEGSPMSKGEFQHNLWGIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDWG LR ++KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWGKLRKQVAKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL +G+W+ +K +++ +GS+Q I EIP+++K +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVNLGLWTEDLKQELMRANGSIQHIDEIPQDIKDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFT------- 770
G +IDQSQSLN+ M+ K+TS+HF W GLKTGMYYLR+++A DAIKFT
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYAWRSGLKTGMYYLRTKSAVDAIKFTVKKAKKS 759
Query: 771 ------------VDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
V T+ K P E + +E K ++C+ CGS
Sbjct: 760 IAVPAEAAAGISVQTTGSKPAPVAVEPLTPEEMKEMIARAKDGQDDDCLMCGS 812
>gi|146298284|ref|YP_001192875.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
johnsoniae UW101]
gi|146152702|gb|ABQ03556.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
johnsoniae UW101]
Length = 797
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/820 (63%), Positives = 638/820 (77%), Gaps = 32/820 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGHREPVMFDKITERIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA LAAR+A+SNLH NTKKSFSET+KDMYN+ N R+G APLIADD+
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHSNTKKSFSETMKDMYNYVNPRNGQDAPLIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I +NAA LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVS+GIH
Sbjct: 120 YKVIQENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+ S I+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 DDLKSVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+E WHADIF+FL+LKKN GKEE RARDLF+A+W DLFM+RVQ + W+L CPNE GL
Sbjct: 300 IETWHADIFDFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDSTWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LYT YE GK +K ++A+ LW +IL SQIETGTPYML+KD NRKSN +NL
Sbjct: 360 DVYGDEFEALYTDYEFRGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNHKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+E+TS E AVCNLASI+LP F+ N F
Sbjct: 420 GTIRSSNLCTEIMEFTSKDEIAVCNLASISLPMFI--------------------DNGEF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L VT VT NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI+L M F S
Sbjct: 460 DHQALYNVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S E+A +EGPY T+ SP+S+G Q +MW + S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPMSQGEFQYNMWGMKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVVEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL ++G+W+ +K +I+ +GSVQ I +IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVKLGLWNEDLKQEIMRHNGSVQNIDKIPQDLKDLYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M N+ K+TS+HF W GLKTGMYYLR++AA DAIKFT++ K
Sbjct: 700 GYFIDQSQSLNLFMQDANYSKLTSMHFYAWQSGLKTGMYYLRTKAAVDAIKFTLNND--K 757
Query: 778 EKPEKPELVVDDET------KMAQVVCSLTNREECMACGS 811
++ P LV + E K + + E+C CGS
Sbjct: 758 KEETAPSLVQETEAISVEDYKAMLLKAQAADPEDCEMCGS 797
>gi|330805291|ref|XP_003290618.1| ribonucleotide reductase large subunit [Dictyostelium purpureum]
gi|325079257|gb|EGC32866.1| ribonucleotide reductase large subunit [Dictyostelium purpureum]
Length = 855
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/798 (64%), Positives = 634/798 (79%), Gaps = 20/798 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLK---KLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLD 57
MYV+KRDG+++ V FDKIT+R++ ++ L+ E DP V+QKV +GV+ GV T++LD
Sbjct: 16 MYVIKRDGQKQNVTFDKITSRIRFLCEMEPRLNEEIVDPAEVAQKVISGVFPGVKTTELD 75
Query: 58 ELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIA 117
LAAETAA M+T HPDY LAARI+VSNLHK T S ET+K Y + N ++ L APL++
Sbjct: 76 NLAAETAAYMSTRHPDYGVLAARISVSNLHKQTSTSLVETVKIQYEYINSKTNLPAPLVS 135
Query: 118 DDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIG 177
++Y+I+ ++A L+ I Y RDFDYD+FGFKTLERSYL ++ +VERPQHMLMRVSIG
Sbjct: 136 KELYDIVNEHAERLEKAIDYQRDFDYDFFGFKTLERSYLHRINNSIVERPQHMLMRVSIG 195
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH +DID+AI TY +SQ+ FTHA+PTLFNAGTP PQ+SSCFLV MK+DSI+GIY+TLK+
Sbjct: 196 IHGNDIDNAILTYEKLSQKLFTHATPTLFNAGTPYPQMSSCFLVQMKEDSIDGIYDTLKQ 255
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG++ H IRA SYIRGTNGTSNG+VPMLRVFNDTARYVDQGGGKRKGAF
Sbjct: 256 CALISKSAGGIGIACHKIRAAQSYIRGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGAF 315
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWH+DIFEF+ LKKNHGKEE RARDLFYALWV DLFMERV+ NG WSLFCPNEA
Sbjct: 316 AVYLEPWHSDIFEFIELKKNHGKEEMRARDLFYALWVSDLFMERVEQNGDWSLFCPNEAP 375
Query: 358 GLADCWGAEFEKLYTHYER-EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSN 416
L + E +LY YE G A++V++AQ LWF I+ SQ+ETGTP++L+KD+CN KSN
Sbjct: 376 RLDETHSEEHRELYLKYENTPGLARRVIKAQELWFAIMESQVETGTPFILYKDSCNSKSN 435
Query: 417 QQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSK 476
Q+NLGTI SSNLCTEII+YTSP E AVCNLASIALP+F+R K+ GS K
Sbjct: 436 QKNLGTISSSNLCTEIIQYTSPDEIAVCNLASIALPKFIRRKE-----------GSTNPK 484
Query: 477 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+ FD +KL E+T IVT+NLNKIID NYYPV+ A+ SNLRHRPIGIG+QGLAD FI L M
Sbjct: 485 EKEFDHQKLYEITKIVTKNLNKIIDRNYYPVQEAKTSNLRHRPIGIGIQGLADVFIQLRM 544
Query: 537 AFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD 596
F+ A +LN +I ETIY+ AL S E++ EGPYET+ SP S+GILQ D WNV P++
Sbjct: 545 PFDGTAAAKLNIEIAETIYFAALTASHELSLIEGPYETFKGSPASQGILQYDFWNVTPTN 604
Query: 597 RWDWGVLRD-MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RW+W L+D +++K G+RNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +
Sbjct: 605 RWNWTDLKDKIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFTI 664
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VNK LL DL E+GIWSP +KN+I+ + GS+Q IP IP++LK +YKTVWEI+Q TL+DMA
Sbjct: 665 VNKQLLEDLMELGIWSPELKNQIVLNRGSIQSIPSIPDDLKELYKTVWEIRQRTLIDMAA 724
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG +IDQSQS N+ + +P F K+TS+HF +W +GLKTGMYYLR+R AADAI+FTVD +V
Sbjct: 725 DRGAFIDQSQSFNVFIAEPTFAKLTSMHFYSWKKGLKTGMYYLRTRPAADAIQFTVDPTV 784
Query: 776 FKEKPEKPELVVDDETKM 793
+ P+ V D+T +
Sbjct: 785 ----QQTPKPVEKDQTPL 798
>gi|341877710|gb|EGT33645.1| CBN-RNR-1 protein [Caenorhabditis brenneri]
Length = 786
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/798 (64%), Positives = 634/798 (79%), Gaps = 20/798 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKRDGR E VHFDKIT+R++KLSYGL+ E DPV V+ KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRSEDVHFDKITSRIQKLSYGLNMEFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA+MTT HP+YA LAARIAVSNLHK T K FSE ++ ++N ++ +G AP+I+D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMRTLHNFHHPHTGKHAPMISDETW 127
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
II KNA L+S I+YDRD+ Y YFGFKTLERSYLLK+ +VVERPQ MLMRV+IGIH +
Sbjct: 128 AIIEKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEVVERPQQMLMRVAIGIHGN 187
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI +AI+TY++MS+R+ THASPTLFN+GT RPQ+SSCFL+ M +DSI GIY+TLK+CA+I
Sbjct: 188 DIAAAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEF+ L+KN G EE RARDLF ALWVPDLFM+RV+ + WSL CP E GL D
Sbjct: 308 EPWHADVFEFVALRKNTGPEEERARDLFLALWVPDLFMKRVEKDQDWSLMCPCECPGLDD 367
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
CWG EFEKLYT YE EG+ +KVV+A+ LW I+++QIETG PY+ +KD NRKSNQQNLG
Sbjct: 368 CWGEEFEKLYTRYEAEGRFRKVVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEIIEY++P E AVCNLASIAL RFV + + FD
Sbjct: 428 TIKCSNLCTEIIEYSAPDEIAVCNLASIALNRFV-------------------TPEKTFD 468
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KLAEVT ++T+NLNKIIDVNYYPVE AR SN+RHRPIG+GVQGLAD F+L+ F S
Sbjct: 469 FKKLAEVTKVITKNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRFPFTSE 528
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
A+ LNK IFETIYY AL+ S E+A K+GPY TY SPVSKG LQ DMW V P+D+ +W
Sbjct: 529 GARDLNKRIFETIYYAALEASCELAEKDGPYSTYQGSPVSKGQLQFDMWGVTPTDQCNWN 588
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSG+F +VN H+L
Sbjct: 589 ALRQKIAKHGVRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL E G+WS +KN++I ++GS+Q IP IP+++K +Y+TVWEI Q +++MA DRG +I
Sbjct: 649 KDLVERGLWSDEMKNRLIANNGSIQNIPGIPDDIKELYRTVWEISQKEIIEMAADRGAFI 708
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
DQSQSLNIHM +P++ +TS+HF W +GLKTGMYYLR++ A +A++FTVD S K P
Sbjct: 709 DQSQSLNIHMAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKSALK-TPS 767
Query: 782 KPELVVDDETKMAQVVCS 799
K E+ ++ V+CS
Sbjct: 768 KQEVAKEEPQDEGCVMCS 785
>gi|305665629|ref|YP_003861916.1| putative ribonucleoside-diphosphate reductase large chain
[Maribacter sp. HTCC2170]
gi|88710385|gb|EAR02617.1| probable ribonucleoside-diphosphate reductase large chain
[Maribacter sp. HTCC2170]
Length = 825
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/788 (64%), Positives = 630/788 (79%), Gaps = 24/788 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR+E + FDKITAR++KL YGL+ DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGRKELIMFDKITARVRKLCYGLNG-LVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI+VSNLHKNTKKSFSET++D+Y + N R+G KAPL++D++
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSETMEDLYTYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I +N+ LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVSIGIH
Sbjct: 120 YKVIAENSVALDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+D+ +TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 DDLDAVKETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLQVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIFEFL LKKNHGKEE RARDLFYA+W+ DLFM+RV+ N +W+L CPNE GL
Sbjct: 300 MEPWHADIFEFLELKKNHGKEEMRARDLFYAMWISDLFMKRVEANEEWTLMCPNECPGLF 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
EFEKLY YE E K +K V+A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 TNHSEEFEKLYLKYESENKGRKTVRARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP F+ KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KNGEF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L VT VT+NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FILL + F S
Sbjct: 460 DHKELFRVTKRVTKNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFILLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S E A +EG Y +Y SP+S+G Q ++W + S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEAAKEEGKYSSYDGSPISQGEFQHNLWGIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWTKLRKDVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL +G+W+ +K +++ +GS+Q I IP++++ +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVNLGMWNENMKQELMRANGSIQHIETIPQDIRDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR++AA DAIKFT+D S K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNSKKK 759
Query: 778 EKPEKPEL 785
E+P + E+
Sbjct: 760 EEPVEAEV 767
>gi|340617899|ref|YP_004736352.1| ribonucleoside-diphosphate reductase, large subunit [Zobellia
galactanivorans]
gi|339732696|emb|CAZ95964.1| Ribonucleoside-diphosphate reductase, large subunit [Zobellia
galactanivorans]
Length = 828
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/783 (64%), Positives = 628/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E V FDKITAR++KL YGL+ DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGRKEMVMFDKITARVRKLCYGLNG-LVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI+VSNLHKNTKKSFSET+KD+Y + N R+ KAPL++D++
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSETMKDLYEYVNPRTNKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I +N+ LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVS+GIH
Sbjct: 120 YKVISENSERLDSTIIYNRDFGYDYFGFKTLERSYLLKINGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D+AI+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 NDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLQVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADI+ FL+LKKNHGKEE RARDLFYA+W+ DLFM RV+ N +W+L CPNE GL
Sbjct: 300 MEPWHADIYAFLDLKKNHGKEEMRARDLFYAMWISDLFMRRVEANEEWTLMCPNECPGLF 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
EFE+LY YE EGK +K V+A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 THHSEEFEELYLKYEAEGKGRKTVKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP FV KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KNGSF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +VT VT NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L + F S
Sbjct: 460 DHKELFKVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S E+A +EGPY T+ SP+S+G Q ++W V S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPISQGEFQHNLWGVKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWEKLRKEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL +G+W+ +K +++ +GS+Q I IP++++ +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVNLGLWNENMKQELMRANGSIQHIETIPQDIRDLYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR++AA DAIKFT+D S K
Sbjct: 700 GYFIDQSQSLNLFMENANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNSKKK 759
Query: 778 EKP 780
P
Sbjct: 760 AAP 762
>gi|399033616|ref|ZP_10732238.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
sp. CF136]
gi|398068051|gb|EJL59512.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
sp. CF136]
Length = 796
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/818 (63%), Positives = 638/818 (77%), Gaps = 29/818 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITERIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA LAAR+A+SNLH NTKKSFSET+KDMY++ N R+G APL++D++
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHSNTKKSFSETMKDMYHYVNPRNGQDAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++I +NAA LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVS+GIH
Sbjct: 120 FKVIQENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+ S I+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 DDLKSVIETYDLMSKKYFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+E WHADIFEFL+LKKN GKEE RARDLF+A+W DLFM+RVQ + W+L CPNE GL
Sbjct: 300 IETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDTTWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE GK +K ++A+ LW +IL SQIETGTPYML+KD NRKSN +NL
Sbjct: 360 DVYGEEFEALYMDYEFRGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNHKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTS E AVCNLASI+LP F+ +N F
Sbjct: 420 GTIRSSNLCTEIMEYTSKDEIAVCNLASISLPMFI--------------------ENGKF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L VT VT NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI+L + F S
Sbjct: 460 DHQALYNVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA+ LN++IFET+Y+ A+ S E+A +EGPY T+ SP+SKG Q +MW + S R
Sbjct: 520 DEAKALNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPMSKGEFQYNMWGMKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVVEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLLHDL E G+W+ T+K +I+ +GSVQ I IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLHDLVERGLWNETLKQEIMRHNGSVQNIDVIPQDLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M N+ K+TS+HF W GLKTGMYYLR+++A DAIKFT++ +
Sbjct: 700 GYFIDQSQSLNLFMQDANYSKLTSMHFYAWQSGLKTGMYYLRTKSAVDAIKFTLNNDKKE 759
Query: 778 EKP----EKPELVVDDETKMAQVVCSLTNREECMACGS 811
E P E E+ V+D M + + E+C CGS
Sbjct: 760 EVPSLVAETEEISVEDYKAML-LKAQAADPEDCEMCGS 796
>gi|19115403|ref|NP_594491.1| ribonucleoside reductase large subunit Cdc22 [Schizosaccharomyces
pombe 972h-]
gi|1350600|sp|P36602.2|RIR1_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase
gi|1067207|emb|CAA91952.1| ribonucleoside reductase large subunit Cdc22 [Schizosaccharomyces
pombe]
Length = 811
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/834 (61%), Positives = 644/834 (77%), Gaps = 46/834 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T+K FS ++ ++++ N ++ AP+I+D I
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+MK+ LDS IIYDRDF Y++FGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TY++MSQR+FTHASPTLFNAGTPRPQLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++HNIRATGSYI GTNGTSNGIVPM+RV+N+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGGIGINIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ +FL L+K HG E+ RAR++FYALW+PDLFM+RV+ N QW+ FCPNEA GLA
Sbjct: 301 LEPWHADVMDFLELRKTHGNEDFRAREMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EF LY YE+E + ++ + AQ +W+ IL SQ+ETG P+ML+KD+CNRKSNQ+N+
Sbjct: 361 DVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCNRKSNQKNV 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEI+EY+SP E AVCNLAS+ALP F+++ +
Sbjct: 421 GTIRCSNLCTEIVEYSSPDEVAVCNLASVALPTFIKDGK--------------------Y 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +V +VT NLNKIIDVNYYPV ARRSN+RHRP+G+GVQGLAD F L + FES
Sbjct: 461 NFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A++LN IFETIY+ AL+ S EIA EG YE+Y SP S+GILQ DMWNV P+D WDW
Sbjct: 521 AGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPASQGILQYDMWNVNPTDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 AELKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E +W+ +KNK++ DGS+Q IPEIP++LK +YKTVWEI Q T++D A DRG +
Sbjct: 641 LKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK- 779
IDQSQSLNIH+ P++ K+TS+HF W +GLKTGMYYLR+ AA+ AIKFTVD + +
Sbjct: 701 IDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARN 760
Query: 780 ----------------------PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
P K E+ + +E +A CS+ N E C C +
Sbjct: 761 EESNEENKKPVIKNGKAEISAEPTKEEIDIYNEKVLA---CSIKNPEACEMCSA 811
>gi|225011000|ref|ZP_03701466.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-3C]
gi|225004907|gb|EEG42863.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-3C]
Length = 827
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/783 (64%), Positives = 629/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDG+ E + FDKITAR++KL YGL+ E DPV VS +V G+Y GVTTS+LD LA
Sbjct: 1 MYVLKRDGKNEPMMFDKITARVRKLCYGLN-ERVDPVKVSLRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPD+A LAARI+VSNLHKNTKKSFSET++D+Y + N R+G +PL++D++
Sbjct: 60 AEIAATMTTTHPDFAKLAARISVSNLHKNTKKSFSETMEDLYKYVNPRNGKSSPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ IM NA LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVS+GIH
Sbjct: 120 YQAIMDNAELLDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVSVGIHP 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+DSAI+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 TDMDSAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGVVPMLKVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+PDLFM+RV+ N +W+L CPNE L
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEANAEWTLMCPNECPNLF 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ F++LY YE EGK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 NNHSEAFDELYLKYESEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP FV K+ F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KDGAF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +VT VT+NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L + F S
Sbjct: 460 DHKELFKVTKRVTKNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ AL S E A +GPY++Y SP+S+G Q ++W + S R
Sbjct: 520 DEAKKLNEEIFETLYFAALTASMEEAKADGPYQSYKGSPISQGEFQHNLWGIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAKLRKDVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL +G+W +K +++ +GSVQ I IP+++K +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVALGLWDEGLKQELMRANGSVQHIDIIPQDIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR++AA DAIKFT+D + K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNTAKK 759
Query: 778 EKP 780
+ P
Sbjct: 760 DVP 762
>gi|374288409|ref|YP_005035494.1| putative ribonucleoside-diphosphate reductase 1 subunit alpha
[Bacteriovorax marinus SJ]
gi|301166950|emb|CBW26529.1| putative ribonucleoside-diphosphate reductase 1 subunit alpha
[Bacteriovorax marinus SJ]
Length = 785
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/812 (62%), Positives = 637/812 (78%), Gaps = 28/812 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E + FDKIT R++ L++ L E DP L++ KV G++ G++T +LD+LA
Sbjct: 1 MYVITRSGEREPIKFDKITERIESLAFDLDKEFIDPSLITSKVIEGIFDGISTPELDKLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
ETAA ++T HPDY+ LA RIAVSNLHK T+ FSE IK+MYN+ N +G APLI+ ++
Sbjct: 61 GETAAYLSTQHPDYSKLAGRIAVSNLHKETRGCFSENIKEMYNYVNPATGEMAPLISKEL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE++M+NA LD+ + RDF+YDYFGFKTLERSYLLK+ GK+ ERP MLMRVS+GIH
Sbjct: 121 YEVVMENAEMLDTAVDDKRDFNYDYFGFKTLERSYLLKMDGKITERPGQMLMRVSVGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+ +AI+TY++MS+++FTHASPTLFN+GT +PQLSSCFL+ MKDDSIEGIY+TLK+ A+
Sbjct: 181 NDMKAAIETYNLMSEKYFTHASPTLFNSGTSKPQLSSCFLLTMKDDSIEGIYDTLKQSAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GS+I+GTNGTSNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRAKGSFIKGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL +KKN GK+E+RARDLFYALW+ DLFM+RV+ +G WSLFCP+E G+A
Sbjct: 301 LEPWHADIFDFLEMKKNTGKDENRARDLFYALWISDLFMKRVEADGMWSLFCPHECPGMA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +GAEFE LYT YE EGKAKKVV+AQ+LWF +L SQIETG+PYML+KD+ N KSNQ+NL
Sbjct: 361 ETYGAEFEALYTKYESEGKAKKVVRAQDLWFAVLESQIETGSPYMLYKDSINEKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYT+P E AVCNLASIAL FV E + +
Sbjct: 421 GTIKSSNLCTEIMEYTAPDEVAVCNLASIALNMFVDE------------------ATKTY 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D +KL +V T NLN+IID+NYYPV A+ SN+RHRPIG+GVQGLADTF + FES
Sbjct: 463 DHKKLYDVVYRATLNLNRIIDINYYPVPEAKNSNMRHRPIGLGVQGLADTFFKMRYDFES 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-WD 599
PEA +LN IFETIY+ AL S ++A K+G YETY SP+S+G Q DMW V PS + WD
Sbjct: 523 PEALELNNQIFETIYFAALSASKDLAMKDGAYETYEGSPMSQGQFQFDMWGVTPSAKNWD 582
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR ++++GVRNSLLVAPMPTASTSQILGNNECFEP TSNIY RRVLSGEF VVNK
Sbjct: 583 WSALRKEVAEHGVRNSLLVAPMPTASTSQILGNNECFEPITSNIYVRRVLSGEFAVVNKF 642
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L++DL G+W ++N+II ++GS+Q I IPEELK +YKTVWEI Q T+++M+ R
Sbjct: 643 LVNDLIRAGLWDDKMRNEIIANNGSIQAIERIPEELKGLYKTVWEISQKTVINMSAGRAP 702
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YIDQ QSLNIHM +PNF K++S+HF W GLKTGMYYLR+RAA +A++FTV K
Sbjct: 703 YIDQGQSLNIHMQEPNFGKLSSMHFYAWKAGLKTGMYYLRARAAVNAVQFTV-------K 755
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ P+ V+ E A +VCS+ N ++C+ CGS
Sbjct: 756 NDTPK--VNKEDAQAAMVCSIENPDDCVMCGS 785
>gi|336370235|gb|EGN98576.1| hypothetical protein SERLA73DRAFT_92011 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382991|gb|EGO24141.1| hypothetical protein SERLADRAFT_450431 [Serpula lacrymans var.
lacrymans S7.9]
Length = 889
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/777 (63%), Positives = 622/777 (80%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V KR R+E V FDKITAR+ KL YGL ++ DP+ ++QKV AGVY+GVTT +LD LAA
Sbjct: 3 FVFKRGSRKERVQFDKITARINKLCYGLDVDYVDPIEITQKVIAGVYQGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIA+SNLHK TKK+FS+ +KD+Y + N ++G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKNFSQVVKDLYEYINPKNGRAASMISKETY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
E++ +A LDS IIYDRDF Y++FGFKTLERSYLL++ +V ERPQHM+MRV++GIH
Sbjct: 123 EVVQAHAETLDSAIIYDRDFHYNFFGFKTLERSYLLRINNRVAERPQHMIMRVAVGIHGS 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID ++TYH+MS+R+FTHASPTLFNAGTP PQLSSCFLVCMKDDSIEGIY+TLK CA+I
Sbjct: 183 DIDRVLETYHLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWH DIF+F++L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG+WSLFCPNEA L +
Sbjct: 303 EPWHNDIFDFIDLRKNHGKEESRARDLFYALWIPDLFMKRVEANGEWSLFCPNEAPNLHE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G EFE LY YE+EG++++ + AQ LW+ IL +QIETG P+M +KD NRKSNQ+NLG
Sbjct: 363 VYGEEFEALYEKYEKEGRSRRTIPAQKLWYAILEAQIETGGPFMCYKDAANRKSNQKNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY+SP ETAVCNLAS+ALP F+ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASMALPSFI--------------------VNGKYD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL +V ++T+NLN+IIDVNYYP ARRSN+RHRPIG+GVQGLAD F+ L M F+SP
Sbjct: 463 FQKLHDVAKVITKNLNRIIDVNYYPTPEARRSNMRHRPIGVGVQGLADAFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA++LN IFETIY+ AL++SSE+A KEGPYET+ SP +G LQ D+W V P+D WDW
Sbjct: 523 EAKELNIQIFETIYHAALESSSELAEKEGPYETWKGSPAEQGQLQFDLWGVTPTDLWDWT 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +V LL
Sbjct: 583 SLKERIARTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L ++G+W+ +KN II ++GS+Q I IPE++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 643 RELVDLGLWNDQMKNMIIANNGSIQSIIGIPEDVKAIYKTVWEISQKKVIDLAADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLNIH+ P ++TS+HF W +GLKTGMYY+R+R AA AI+FTVD S K+
Sbjct: 703 CQSQSLNIHLQSPTLGQLTSMHFYGWKKGLKTGMYYMRTRPAAQAIQFTVDQSFIKD 759
>gi|255710753|ref|XP_002551660.1| KLTH0A04686p [Lachancea thermotolerans]
gi|238933037|emb|CAR21218.1| KLTH0A04686p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/775 (62%), Positives = 632/775 (81%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRREPVKFDKITARVSRLCYGLDPNHVDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ + D++++ N ++G+ +P+I+ ++
Sbjct: 61 AETCAYMTTIHPDYATLAARIAISNLHKQTTKQFSQVVSDLFHYVNPKNGIHSPMISQEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++II K+ L+S I+YDRDF Y+YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 FDIIQKHKDELNSAIVYDRDFQYNYFGFKTLERSYLLRINGEVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+I I+TY++MS ++FTHASPTLFNAGTP PQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 181 DNIPKVIETYNLMSLKYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+F++++KNHGKEE RARDLF ALWVPDLFM+RVQ NG W+LF P+EA GL+
Sbjct: 301 LEPWHSDIFDFVDIRKNHGKEEIRARDLFPALWVPDLFMKRVQENGDWTLFSPSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY Y +EG+ +K ++AQ LW+ IL +Q ETGTP+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYERYVQEGRGRKTIKAQKLWYAILEAQTETGTPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS++LP F+ S + +++
Sbjct: 421 GVIKSSNLCCEIVEYSAPDETAVCNLASLSLPAFIET--------------SEDGQTQWY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLN++ID NYYPVE+AR SN+RHRP+ +GVQGLAD F++L + F+S
Sbjct: 467 NFDKLHEIAKVVTHNLNQVIDRNYYPVESARNSNMRHRPVALGVQGLADAFMILRIPFDS 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ AL+ S+E+A + GPYET+ SP S+GILQ DMW+ P+D WDW
Sbjct: 527 QEAKELNIQIFETIYHAALERSNELAVEHGPYETFEGSPASQGILQFDMWDKKPTDLWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLL+APMPTASTSQILGNNECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 ETLKAKIVKTGLRNSLLLAPMPTASTSQILGNNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ +K+ II D+GS+Q +P IP++LK +YKTVWE+ Q T+++MA DR CY
Sbjct: 647 LRDLVDLGIWNDAMKSHIISDNGSIQNLPNIPQKLKDLYKTVWELSQKTIIEMAADRACY 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLN+H+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D SV
Sbjct: 707 IDQSQSLNVHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSV 761
>gi|423328774|ref|ZP_17306581.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 3837]
gi|404604336|gb|EKB03970.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 3837]
Length = 797
Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/819 (62%), Positives = 638/819 (77%), Gaps = 30/819 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GV TS+LD LA
Sbjct: 1 MYVIKRDGRREPVSFDKITDRIRILCYELN-EFVDPVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA LAARIAVSNLHKNTKK FSET++D+Y + N R+G +APLIADD+
Sbjct: 60 AETAASMTVTHPDYALLAARIAVSNLHKNTKKVFSETVEDLYRYVNPRTGQEAPLIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+I K++ LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV++GIH
Sbjct: 120 YEVIKKHSERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDS I+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 180 DDIDSVIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+F+ L+KNHGKEE RARDLF ALW+ DLFM+RV+ + +W+L CPNE GL
Sbjct: 300 LEPWHADVFDFIELRKNHGKEEMRARDLFLALWINDLFMQRVEADEKWTLMCPNECPGLC 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YE EGK ++ ++A+ LW +L +QIETGTPYML+KD N KSNQ+NL
Sbjct: 360 DVYGEEFEQLYLKYENEGKGRRTIKARELWEAVLEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G I+SSNLCTEI+EYTSP E AVCNLASI+LP FV + F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFVEDGQ--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ + L +VT +T NLN++ID NYYPVE A SN+RHRP+G+GVQGLAD FI++ M F S
Sbjct: 460 NHQFLFDVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMMRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
PEA+QLN++IFETIY+ AL S E+A +EG Y T+ SP+SKG Q +MW V S R
Sbjct: 520 PEAKQLNQEIFETIYFAALTASMEMAKEEGAYSTFEGSPISKGEFQYNMWGVKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + NGVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMANGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL E+G+W+ +K +I+ +GS+Q I IP +++ +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDFIPADIRELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR+++A DAIKFT++ K
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLNNEK-K 758
Query: 778 EKP----EKPELVVDDETKMAQ-VVCSLTNREECMACGS 811
P E ++ V+D M Q + N E+C CGS
Sbjct: 759 ANPNAIEEVEQVSVEDYQAMLQRARMAANNDEDCEMCGS 797
>gi|195050620|ref|XP_001992932.1| GH13371 [Drosophila grimshawi]
gi|193899991|gb|EDV98857.1| GH13371 [Drosophila grimshawi]
Length = 821
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/829 (61%), Positives = 641/829 (77%), Gaps = 37/829 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGRQE +HFDKIT+R++KL Y L+ + DPV ++ KV G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEIHFDKITSRIQKLCYNLNMDFVDPVSITLKVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA++TT H DYA LAARIAVSNLHK T+K FS+ +D+Y H N+ + +P++++
Sbjct: 72 AEIAASLTTQHADYALLAARIAVSNLHKETRKVFSDVFEDLYKHINKETNEPSPMVSEFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ K+A L+S IIYDRDF Y+YFGFKTLERSYLLK+ K+ ERPQHMLMRVSIGIH
Sbjct: 132 YNIVKKHADRLNSAIIYDRDFGYNYFGFKTLERSYLLKINHKIAERPQHMLMRVSIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDID+A++TY+++S+R+FTHASPTLF A T RPQ+SSCFL+ M DSIEGI++++++CA+
Sbjct: 192 DDIDAAVETYNLLSERYFTHASPTLFAAATNRPQMSSCFLLTMVSDSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKAAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI EF++LKKN GKEEHRAR+LFYALW+PDLFM+RV+ N WSL CP++ GL
Sbjct: 312 LEPWHSDILEFMDLKKNTGKEEHRARELFYALWIPDLFMKRVEANEDWSLMCPHKCPGLQ 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG +FEKLY YE+EGKA +V++AQ LWF I+ +Q+ETGTPYMLFKD+CNRKSNQQN+
Sbjct: 372 DVWGDDFEKLYVQYEKEGKANRVIKAQTLWFAIIEAQVETGTPYMLFKDSCNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY++P E AVCNLASIAL FV + ++ +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TSDKTY 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT VT+NLNKIID+NYYP+ A++SN RHRPIGIGVQG AD IL+ +ES
Sbjct: 473 DFKKLKEVTKTVTKNLNKIIDINYYPLPEAKKSNFRHRPIGIGVQGFADALILMRHPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ IFETIY+ AL+ S E+A KEGPYETY SPVSKGILQ DMW P+D WDW
Sbjct: 533 EEAALLNQQIFETIYFGALEASCELAQKEGPYETYPGSPVSKGILQYDMWGKTPTDLWDW 592
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTAST+QI+GNNE FEPYTSNIY+RRVLSGEF VVN HL
Sbjct: 593 NSLKLSIKEHGVRNSLLVAPMPTASTAQIMGNNESFEPYTSNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KN+II GS+Q I IP+ ++ +YKTVWEI T + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIIASRGSIQNIESIPKNVRDLYKTVWEISVKTTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV--------- 771
IDQSQS NIH+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA+AI+FTV
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVAKGSPVKQT 772
Query: 772 ----DTSVFK-----EKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+TS + E E ++ E KMA VVCSL N++ C++CGS
Sbjct: 773 NGLHNTSFVEHNDSMENGNVSESDLERERKMADVVCSLENKDACLSCGS 821
>gi|170088813|ref|XP_001875629.1| ribonucleotide reductase alpha subunit [Laccaria bicolor S238N-H82]
gi|164648889|gb|EDR13131.1| ribonucleotide reductase alpha subunit [Laccaria bicolor S238N-H82]
Length = 881
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/777 (64%), Positives = 620/777 (79%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V KR R+E V FDKITAR++KL YGL+ DP+ +QKV AGVY GVTT +LD LAA
Sbjct: 3 FVFKRGARKERVQFDKITARIQKLCYGLNENFVDPIEFTQKVVAGVYHGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIAVSNLHK TKK+FS+ IKD+Y + N ++ A +I+ +IY
Sbjct: 63 ETAAYLTTKHPDYAVLAARIAVSNLHKETKKNFSQVIKDLYEYVNPKNRRPAGMISQEIY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
EI+ +NA LDS IIY+RDF +++FGFKTLERSYLL++ G+V ERPQHM+MRV++GIH
Sbjct: 123 EIVRENAEALDSAIIYNRDFSFNFFGFKTLERSYLLRLNGRVAERPQHMIMRVAVGIHGR 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID ++TY++MS+R+FTHASPTLFNAGTP PQLSSCFLVCMKDDSIEGIY+TLK CA+I
Sbjct: 183 DIDRVVETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+S+H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLSIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG WSLFCPNEA+GL +
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGDWSLFCPNEAAGLGE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
AEFE LY YE+EG+A+K + AQ LW+ IL +QIETG P+M++KD N KSNQ+NLG
Sbjct: 363 VHSAEFEALYEKYEKEGRARKSIPAQKLWYAILEAQIETGGPFMVYKDHANSKSNQKNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY+SP ETAVCNLAS+ALP F+ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPEETAVCNLASLALPTFI--------------------SNGKYD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL +VT +V NLN+IIDVNYYP+ AR SN+RHRPIG+GVQGLADTF+ L M F+SP
Sbjct: 463 FQKLHDVTKVVAYNLNRIIDVNYYPIPEARLSNMRHRPIGVGVQGLADTFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
A++LN IFETIY+ AL+ SSE+A ++GPYET+ SP G LQ D+W V P+ WDW
Sbjct: 523 AAKELNIQIFETIYHGALEASSELAERDGPYETWMGSPAQLGQLQYDLWGVTPTGLWDWT 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKEKIARTGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L ++G+W +KN II +GSVQ IP IP+++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 643 RELVDLGLWDDNMKNMIIAHNGSVQNIPTIPDDVKAIYKTVWEISQKKVLDLAADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD S+ KE
Sbjct: 703 CQSQSLNVHLQAPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAASAIQFTVDQSLLKE 759
>gi|190346673|gb|EDK38820.2| hypothetical protein PGUG_02918 [Meyerozyma guilliermondii ATCC
6260]
Length = 863
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/775 (63%), Positives = 630/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL T H D V ++Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDTAHVDAVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K FS+ K++Y++ N ++ L +P+I+ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVSKELYDYINPKTDLHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I K+A L+S I++DRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YDVIQKHADELNSAIVFDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ I++Y++MSQR+FTH SPTLFNAGTP PQ+SSCFLV MK+DSI+GIY+TLK CA+
Sbjct: 181 DDIEKVIESYNLMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRGTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIFEF++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GL
Sbjct: 301 LEPWHSDIFEFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLP 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFE LY YEREG+ + ++AQ LW+ IL +Q ETGTP+ML+KD CN+K+NQ+NL
Sbjct: 361 EVYGDEFEALYEKYEREGRGRSTIKAQKLWYAILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP E AVCNLASIALP FV E D + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFV-ESD---------------NNSTWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL EVT VT NLN+IID NYYPV ARRSN+R+RPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFDKLHEVTKTVTGNLNRIIDRNYYPVPEARRSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A KEGPYE+Y SP S+G+LQ D+W+ P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHGAVEASIELAQKEGPYESYEGSPASQGLLQFDLWDRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ ++KN II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LRDLVDLGLWNDSMKNNIISNNGSIQNLPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AAA AI+FTVD+S
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVDSST 759
>gi|392397203|ref|YP_006433804.1| ribonucleoside-diphosphate reductase subunit alpha [Flexibacter
litoralis DSM 6794]
gi|390528281|gb|AFM04011.1| ribonucleoside-diphosphate reductase, alpha subunit [Flexibacter
litoralis DSM 6794]
Length = 842
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/780 (66%), Positives = 624/780 (80%), Gaps = 19/780 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V KITAR+++L L T + P ++ KV AG+Y VTT +LDELA
Sbjct: 1 MYVIKRDGRKEEVIMQKITARIERLCDNLDTRYIKPKEITYKVLAGLYDNVTTIELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA M T HPDYA LA+RIA+SNLHK TK +FSETI+++YN+ N ++ A LI+D++
Sbjct: 61 AETAATMATVHPDYAILASRIAISNLHKETKDAFSETIEELYNYINPKTNESAGLISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K A L+ + Y RD++YDYFGFKTLERSYLL++ GKV ERPQ M+MRVS+GIH
Sbjct: 121 VQVVRKYAHVLNQAVDYSRDYEYDYFGFKTLERSYLLRLDGKVTERPQQMIMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AIKTYH++S+RWFTHA+PTLFNAGTP+PQ+SSCFL+ ++ DS++GIY+TLK+CA
Sbjct: 181 ADIDAAIKTYHLISERWFTHATPTLFNAGTPKPQMSSCFLLEVQGDSVDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIGVSVHN+RATGSYIRGTNG SNGIVPML+VFNDTARY+DQGG KRKGAFAVY
Sbjct: 241 ISQSAGGIGVSVHNVRATGSYIRGTNGYSNGIVPMLKVFNDTARYIDQGGNKRKGAFAVY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+LKKNHGKEE RARDLFYALW+ D+FM+RVQ +G+WSLFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLKKNHGKEEARARDLFYALWISDIFMKRVQEDGEWSLFCPNEARGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G E E+LYT YEREGKA+K ++AQ LWF IL +QIETGTPYML+KD N KSNQ+NL
Sbjct: 361 DCYGTEHEELYTRYEREGKARKTIRAQELWFAILEAQIETGTPYMLYKDHANNKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYT+P E AVCNLAS+ALP+FV + +E F
Sbjct: 421 GTIKSSNLCTEIMEYTAPDEVAVCNLASLALPKFVMDNGNGLE----------------F 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ EKL EV T NLN+IID NYYPVE AR SN+RHRPIG+GVQGLAD FILL M FES
Sbjct: 465 NHEKLYEVAYTATVNLNRIIDRNYYPVEEARNSNMRHRPIGLGVQGLADAFILLRMPFES 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV---IPSDR 597
EA LNK+IFET+Y+ A+ S ++A EG YET+ SP+SKG Q DMWNV S R
Sbjct: 525 EEAAALNKEIFETMYFAAMTASKDLAITEGAYETFEGSPLSKGQFQFDMWNVDEDYHSGR 584
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W LR + K+G RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVLSGEFVVVN
Sbjct: 585 WNWEELRGEVVKHGARNSLLLAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFVVVN 644
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL + +W +KN++I +GSVQ I IP+ELK IYKTVWEI Q T++DM+ DR
Sbjct: 645 KHLLKDLIAIDMWDDQMKNELISANGSVQNIKRIPQELKDIYKTVWEISQRTIIDMSADR 704
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G YI QSQSLN+H+ P F K+TS+HF W RGLKTGMYYLR++AAADAIKFTVD +
Sbjct: 705 GVYICQSQSLNVHIQNPTFGKLTSMHFHAWKRGLKTGMYYLRTKAAADAIKFTVDKDALE 764
>gi|71020483|ref|XP_760472.1| hypothetical protein UM04325.1 [Ustilago maydis 521]
gi|46100377|gb|EAK85610.1| hypothetical protein UM04325.1 [Ustilago maydis 521]
Length = 1117
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/778 (64%), Positives = 623/778 (80%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV KRDGR+E V FDK+TAR+ KL YGL + DP+ +++KV G+Y+GVTT +LD LA
Sbjct: 233 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIEGIYEGVTTVELDNLA 292
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA TT HPDYA LAARIA+SNLHK T K+FS+ ++ +Y + N ++G +P+I+D
Sbjct: 293 AETAAYKTTTHPDYAVLAARIAISNLHKETSKNFSQVVQALYEYVNPKNGRHSPMISDAT 352
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M++ LDS IIY+RDF Y++FGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 353 YKVVMEHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 412
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+SAI+TY++MSQ++FTHASPTLFNAGTP PQLSSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 413 QDIESAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 472
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 473 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 532
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+D+FEFL+L+KNHGKEE RAR+LFYALWVPDLFM+RV+ NG WSL CPNE GLA
Sbjct: 533 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 592
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY YE EG++K+ V+AQ LW+ IL SQ ETG P++L+KD NRKSNQ+NL
Sbjct: 593 DCYGDEFERLYERYEAEGRSKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 652
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEIIEY++P E AVCNLASIALP F+ PV + +
Sbjct: 653 GTIKCSNLCTEIIEYSAPDEVAVCNLASIALPTFID----PV--------------TKTY 694
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF++L V + +NLNKIID+NYYPVE AR+SN+RHRPIGIGVQGLAD F+++G AFES
Sbjct: 695 DFKRLHSVAKAICKNLNKIIDINYYPVEEARKSNMRHRPIGIGVQGLADAFMIMGYAFES 754
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ AL+ S E+A + G YETY SP S+G LQ DMW V PSD WDW
Sbjct: 755 AEARRLNVQIFETIYHAALERSCELAEQHGSYETYAGSPASQGELQYDMWGVTPSDLWDW 814
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 815 AELKAKIAKHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 874
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L +L E G+W+ T+KN+II GS+Q +P IP+ +K +YKTVWEI Q ++DMA DRG +
Sbjct: 875 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPDRIKKLYKTVWEISQKAIIDMAADRGAF 934
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
I QSQSLNIH+ P F ++TS+HF W +GLKTG YYLR++ A++AI+FT+ + E
Sbjct: 935 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAIQFTLSVAEVNE 992
>gi|363582864|ref|ZP_09315674.1| ribonucleoside-diphosphate reductase large chain [Flavobacteriaceae
bacterium HQM9]
Length = 814
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/783 (64%), Positives = 630/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR+E + FDKITAR++++ YGL+ E DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGRKEPIMFDKITARVRQMCYGLN-ELVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MT HPDYA LAARI+VSNLHKNTKK+FSE IKD+Y + N R+G A LIADD+
Sbjct: 60 AEIAATMTVAHPDYAQLAARISVSNLHKNTKKTFSEVIKDLYEYVNPRTGKGAALIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M+N LDS IIY+RDF YDYFGFKTLERSYLLK+ G + ERPQHMLMRVSIGIH
Sbjct: 120 YKVVMENKEKLDSTIIYNRDFSYDYFGFKTLERSYLLKINGNIAERPQHMLMRVSIGIHV 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+D+AI+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL L+KNHGKEE RARDLFYA+W+ DLFM+RV+ + W+L CP+E GL
Sbjct: 300 MEPWHADIFDFLELRKNHGKEEMRARDLFYAMWISDLFMKRVEADEDWTLMCPHECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D EFE LYT YE EGK +K V+A+++W ++L SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DVHSEEFESLYTRYEAEGKGRKTVKARDVWEKVLESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP FV +G K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEIAVCNLASIALPMFV-----------------KGGK---F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +VT VT+NLNK+ID NYYPV+ A SN+RHRP+G+G+QGLADTFI+L M F S
Sbjct: 460 DHDELYKVTKRVTKNLNKVIDRNYYPVKQAENSNMRHRPVGLGIQGLADTFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S+E+A EG YE+Y SP+S+G Q ++W + S R
Sbjct: 520 DEAKKLNEEIFETMYFAAVTASNELAEVEGTYESYEGSPISEGKFQFNLWGIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I K+GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWNELRKKIKKSGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLLHDL E+G+W+ +K+ I+ +GS+Q I +P+ELK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLHDLVELGMWNDDLKDAIMRANGSIQNIEGMPQELKDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ K+TS+HF W GLKTGMYYLR+++A DAIKFT+ T+
Sbjct: 700 GYFIDQSQSLNLFMEGATMSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKTNSEV 759
Query: 778 EKP 780
EKP
Sbjct: 760 EKP 762
>gi|374596273|ref|ZP_09669277.1| ribonucleoside-diphosphate reductase, alpha subunit [Gillisia
limnaea DSM 15749]
gi|373870912|gb|EHQ02910.1| ribonucleoside-diphosphate reductase, alpha subunit [Gillisia
limnaea DSM 15749]
Length = 813
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/787 (64%), Positives = 635/787 (80%), Gaps = 28/787 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDG +E V FDKITAR++KL YGL+ E DP+ V+ +V G+Y+GVTTS+LD LA
Sbjct: 1 MYVLKRDGHKEPVMFDKITARIRKLCYGLN-ERVDPLKVAMRVIEGLYEGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A MTT+HPDYA LAARI+VSNLHKNTKK+FSE + D+Y + N R+G KAPL+AD++
Sbjct: 60 AEVSATMTTSHPDYAKLAARISVSNLHKNTKKNFSEVMTDLYEYVNPRTGKKAPLLADEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++I +N LDS IIY+RDF+YDYFGFKTLERSYLLK+ G++ ERPQHMLMRVS+GIH
Sbjct: 120 FKVIQENKELLDSTIIYNRDFNYDYFGFKTLERSYLLKLNGEIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAI+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 NDIESAIETYELMSKKYFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+PDLFM+RV+ + +W+L CPNE L
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEEDAKWTLMCPNECPNLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ G EF+ LY YE EGK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQQNL
Sbjct: 360 NIHGDEFDALYLKYESEGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+E+TSP E AVCNLASIALP F++ K+ F
Sbjct: 420 GTIRSSNLCTEIMEFTSPDEIAVCNLASIALPMFIKGKE--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L ++T VT NLN++ID NYYPV+ A SN+RHRPIG+GVQGLADTFI L M F S
Sbjct: 460 DHKELFKITKRVTRNLNRVIDRNYYPVKEAENSNMRHRPIGLGVQGLADTFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S E+A +EGPY T+ SP+SKG Q ++W V S R
Sbjct: 520 EEAKKLNQEIFETLYFAAVTASMELAQEEGPYSTFKGSPISKGQFQHNLWGVEDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAKLRKQVVKNGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL E+ +W+ +K+ I+ +GSVQ I IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLDDLVELNLWTDDVKDAIMRANGSVQDIDVIPQDLKELYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR+++A DAIKFT+ K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYGWKSGLKTGMYYLRTKSAVDAIKFTLK----K 755
Query: 778 EKPEKPE 784
E+ ++PE
Sbjct: 756 EQKKEPE 762
>gi|146418447|ref|XP_001485189.1| hypothetical protein PGUG_02918 [Meyerozyma guilliermondii ATCC
6260]
Length = 863
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/775 (63%), Positives = 629/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL T H D V ++Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDTAHVDAVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K FS+ K++Y++ N ++ L +P+I+ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVSKELYDYINPKTDLHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I K+A L+S I++DRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YDVIQKHADELNSAIVFDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ I++Y++MSQR+FTH SPTLFNAGTP PQ+SSCFLV MK+DSI+GIY+TLK CA+
Sbjct: 181 DDIEKVIESYNLMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRGTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIFEF++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GL
Sbjct: 301 LEPWHSDIFEFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLP 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFE LY YEREG+ + ++AQ LW+ IL +Q ETGTP+ML+KD CN+K+NQ+NL
Sbjct: 361 EVYGDEFEALYEKYEREGRGRSTIKAQKLWYAILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP E AVCNLASIALP FV E D + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFV-ESD---------------NNSTWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL EVT VT NLN+IID NYYPV ARRSN+R+RPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFDKLHEVTKTVTGNLNRIIDRNYYPVPEARRSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A KEGPYE+Y SP S+G+LQ D+W+ P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHGAVEASIELAQKEGPYESYEGSPASQGLLQFDLWDRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ ++KN II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LRDLVDLGLWNDSMKNNIISNNGSIQNLPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AAA AI+FTVD S
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVDLST 759
>gi|409078833|gb|EKM79195.1| hypothetical protein AGABI1DRAFT_58613 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 868
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/777 (64%), Positives = 619/777 (79%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V KR R+E V FDKIT+R++KL YGL T + DPV V+QKV GVY+GVTT +LD LA+
Sbjct: 3 FVFKRGIRKERVQFDKITSRIEKLCYGLDTNYVDPVEVTQKVVQGVYQGVTTVELDNLAS 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIA+SNLHK TKK+FS+ I D+Y++ N ++G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYAVLAARIAISNLHKETKKTFSQVISDLYHYINPKNGKPAGMISKETY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+++MK+A L+S IIY RDF+Y+YFGFKTLERSYLL++ +V ERPQHM+MRV++GIH +
Sbjct: 123 DVVMKHADTLNSAIIYTRDFNYNYFGFKTLERSYLLRINNRVAERPQHMIMRVAVGIHGE 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID ++TY++MS+R+FTHASPTLFNAGTP PQLSSCFLVCMKDDSIEGIY+TLK CA+I
Sbjct: 183 DIDRVMETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKSCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+F+FL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG WSLFCP+EA GL +
Sbjct: 303 EPWHADVFDFLDLRKNHGKEEARARDLFYALWIPDLFMKRVEANGDWSLFCPSEAPGLHE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EFE LY YE+EG+ +K + AQ LW+ IL SQIETG P+M++KD N KSNQ+NLG
Sbjct: 363 VWGPEFEALYEKYEKEGRQRKTMPAQKLWYAILESQIETGGPFMVYKDHANSKSNQKNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY+SP ETAVCNLAS+ALP F+ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASLALPTFI--------------------NNGKYD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL EV +V NLN+IIDVNYYP+ ARRSN+RHRPIGIGVQGLADTF+ L M F+SP
Sbjct: 463 FQKLHEVAKVVAFNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADTFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA+ LN IFETIY+ AL+ SSE+A EG YETY SPVS+G LQ D+W + P+D WDW
Sbjct: 523 EAKLLNIQIFETIYHGALEASSEMAVSEGRYETYEGSPVSQGQLQYDLWGITPTDLWDWT 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I++ G+RNSLLV+PMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKQQIARTGIRNSLLVSPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L + +W +KN II +GSVQ IP IP ++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 643 RELVGLDLWDDNMKNMIIAHNGSVQNIPNIPADVKAIYKTVWEISQKKVLDLAADRGPFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD SV +
Sbjct: 703 CQSQSLNVHLQSPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSVLNQ 759
>gi|321471172|gb|EFX82145.1| hypothetical protein DAPPUDRAFT_302612 [Daphnia pulex]
Length = 798
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/817 (64%), Positives = 642/817 (78%), Gaps = 25/817 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR GRQE VHFDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVLKRGGRQEDVHFDKITSRIQKLCYGLNSDFVDPTAITMKVINGLYPGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FSE I D+YN N+ + P+I+D
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKETKKVFSEVIDDLYNMKNKITKKPTPMISDFH 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ II K++ L+S IIYDRDF+++YFGFKTLE+SYLLK+ GK VERPQH++MRVS+GIH
Sbjct: 121 HGIITKHSDKLNSAIIYDRDFNFNYFGFKTLEKSYLLKIDGKPVERPQHLMMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLF A TPRPQLSSCFL+ MKDDSI+GIYETLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFYAATPRPQLSSCFLLTMKDDSIDGIYETLKQCAI 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLNVHCIRATGSYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+F+FL+LKKN GKEE+RARDLFYALW+PDLFM RV+++G WSL CP+E GLA
Sbjct: 301 LEPWHSDVFDFLDLKKNTGKEENRARDLFYALWIPDLFMRRVESDGDWSLMCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LYT YE G ++ V+AQ LWF ++ SQIETGTPY+L+KD CNRKSNQQNL
Sbjct: 361 DTWGEEFEALYTKYEESGMYRRKVKAQQLWFAVIESQIETGTPYILYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNL SIAL FV+ ++ F
Sbjct: 421 GTIKCSNLCTEIVEYSSPEEVAVCNLGSIALNMFVK-------------------PDKTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D KL EVT ++T NLNKII++NYYPV A+RSN RHRPIGIGVQGLAD FIL+ F+S
Sbjct: 462 DIPKLKEVTKVLTRNLNKIIEINYYPVPEAKRSNFRHRPIGIGVQGLADAFILMRYPFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A + G YE+Y PVSKGILQ DMW V P+D WDW
Sbjct: 522 EEAQLLNKHIFETIYYGALEASCELAEQLGTYESYPGCPVSKGILQYDMWGVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++G+RNSLL+APMPTAST+QILGNNE E YTSNIY RRVLSGEF VVN HL
Sbjct: 582 AALKKKINEHGLRNSLLLAPMPTASTAQILGNNESIEAYTSNIYVRRVLSGEFQVVNHHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN II ++GS+Q I IP++LK +YKTVWEI Q ++ MA DRG +
Sbjct: 642 LRDLTEGGLWNEDVKNGIIANNGSIQNIDGIPDDLKALYKTVWEIPQRIVIKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQSLNIH+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA AI+FTVD S K+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYSWKLGLKTGMYYLRTKPAASAIQFTVDKSKLKKMN 761
Query: 779 --KPEKPELVVDDETKMAQ--VVCSLTNREECMACGS 811
+DE K + +VCSL NR++C+ CGS
Sbjct: 762 GVDNSAGATNGNDEEKRNREAMVCSLQNRDDCLMCGS 798
>gi|402495789|ref|ZP_10842509.1| ribonucleoside-diphosphate reductase large chain [Aquimarina
agarilytica ZC1]
Length = 816
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/783 (64%), Positives = 631/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR+E + FDKITAR++++ YGL+ E DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGRKEPIMFDKITARVRQMCYGLN-ELVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MT HPDYA LAARI+VSNLHKNTKK+FSE +KD+Y + N R+G A LIADD+
Sbjct: 60 AEIAATMTIAHPDYAQLAARISVSNLHKNTKKTFSEVVKDLYEYVNPRTGKDAALIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M+N LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVSIGIH
Sbjct: 120 YKVVMENKEKLDSTIIYNRDFSYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+D+AI+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL L+KNHGKEE RARDLFYA+W+ DLFM+RV+ + W+L CP+E GL
Sbjct: 300 MEPWHADIFDFLELRKNHGKEEMRARDLFYAMWISDLFMKRVEADENWTLMCPHECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D EFE LYT YE EGK ++ V+A+ +W ++L SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DVHSEEFESLYTRYEAEGKGRRTVKAREVWEKVLESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP FV +G K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEIAVCNLASIALPMFV-----------------KGGK---F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +VT VT+NLNK+ID NYYPV+ A SN+RHRP+G+G+QGLADTFI+L M F S
Sbjct: 460 DHDELFKVTKRVTKNLNKVIDRNYYPVKQAENSNMRHRPVGLGIQGLADTFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S+E+A EG YE+Y SP+S+G Q ++W + S R
Sbjct: 520 DEAKKLNEEIFETMYFAAVTASNELAEVEGTYESYEGSPISQGEFQFNLWGIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I K+GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWKALRAKIQKSGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLLHDL E+G+W+ +K+ I+ +GS+Q I IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLHDLVELGLWNDDLKDAIMRANGSIQNIDGIPQDLKELYKTVWEMSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N K+TS+HF W GLKTGMYYLR+++A DAIKFT+ T+
Sbjct: 700 GYFIDQSQSLNLFMEGANNAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKTNSEV 759
Query: 778 EKP 780
EKP
Sbjct: 760 EKP 762
>gi|393229615|gb|EJD37235.1| hypothetical protein AURDEDRAFT_147076 [Auricularia delicata
TFB-10046 SS5]
Length = 860
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/769 (65%), Positives = 614/769 (79%), Gaps = 20/769 (2%)
Query: 10 QEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTT 69
+E V FDKITAR+ KL YGL +H DP+ +++KV +GVY+GVTT +LD LAAETAA +TT
Sbjct: 21 KERVQFDKITARIAKLCYGLDMDHVDPIEITKKVISGVYQGVTTVELDNLAAETAAYLTT 80
Query: 70 NHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAA 129
HPDYA LAARIA+SNLHK TKK+FS+ I+D+Y + N ++G A LI+++ Y+++ +NA
Sbjct: 81 KHPDYAILAARIAISNLHKETKKNFSQVIEDLYRYVNPKNGKAAGLISEETYQVVKENAE 140
Query: 130 CLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKT 189
LDS IIYDRDF+Y YFGFKTLERSYLL++ G+V ERPQHM+MRV++GIH DI+ AI+T
Sbjct: 141 LLDSAIIYDRDFNYQYFGFKTLERSYLLRLNGRVAERPQHMIMRVAVGIHGRDIERAIQT 200
Query: 190 YHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIG 249
Y++MS+R+FTHASPTLF AGTPRPQLSSCFLV MKDDSIEGIY+TLK CA+ISKSAGGIG
Sbjct: 201 YNLMSERYFTHASPTLFAAGTPRPQLSSCFLVAMKDDSIEGIYDTLKACAMISKSAGGIG 260
Query: 250 VSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIF 309
+++HNIRA GSYI GTNG SNG+VPMLR F+ TARYVDQGG KR GAFA+YLEPWH D+F
Sbjct: 261 LNIHNIRAKGSYIAGTNGVSNGLVPMLRAFDSTARYVDQGGNKRPGAFAIYLEPWHPDVF 320
Query: 310 EFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEK 369
EFL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG+WSLFCPNEA GL + AEFE
Sbjct: 321 EFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGEWSLFCPNEAPGLHEVHSAEFEA 380
Query: 370 LYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLC 429
LY YE+EG+A+K + AQ LW+ IL +QIETG P+ML+KD N KSNQQNLGTIKSSNLC
Sbjct: 381 LYERYEKEGRARKTIPAQKLWYAILEAQIETGGPFMLYKDAANAKSNQQNLGTIKSSNLC 440
Query: 430 TEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVT 489
TEIIEY+SP ETAVCNLASIALP F+ N +DF+KL ++
Sbjct: 441 TEIIEYSSPDETAVCNLASIALPSFI--------------------SNGKYDFQKLHDIA 480
Query: 490 AIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKD 549
IV NLN+IIDVNYYPV ARRSN+RHRPIGIGVQGLAD F+ L + F+ PEA++LN
Sbjct: 481 KIVAFNLNRIIDVNYYPVPEARRSNMRHRPIGIGVQGLADAFMALRLPFDGPEARKLNLQ 540
Query: 550 IFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISK 609
IFETIY+ AL+ SSE+A +GPYET+ SP +G LQ D+W V P+D WDW L++ I++
Sbjct: 541 IFETIYHAALEASSEMAEADGPYETWEGSPAQQGKLQYDLWGVTPTDLWDWASLKERIAR 600
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGI 669
G+RNSLL+APMPTA TSQILG NECFEPYTSNIY+RRVL+GEF +V LL +L +G+
Sbjct: 601 TGLRNSLLLAPMPTAGTSQILGFNECFEPYTSNIYTRRVLAGEFQIVCPWLLKELVALGL 660
Query: 670 WSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNI 729
W +KN II + GSVQ IP IP+++K IYKTVWEI Q ++D+A DRG +I QSQSLN+
Sbjct: 661 WDDRMKNMIIANGGSVQNIPGIPDDVKAIYKTVWEISQKKVLDLAADRGAFICQSQSLNV 720
Query: 730 HMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD SV KE
Sbjct: 721 HLQSPTTGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSVLKE 769
>gi|393186086|gb|AFN02840.1| putative ribonucleoside-diphosphate reductase large chain
[Phakopsora pachyrhizi]
Length = 865
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/777 (63%), Positives = 620/777 (79%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V KRDGR+E V FDKITAR+ KL YGL H +P+ +++KV GV+ GVTT +LD LAA
Sbjct: 3 FVYKRDGRRERVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA MTT HPDYA LAARIA+SNLHK TKK FS+ I+D+YN+ N +G + +I+ Y
Sbjct: 63 ETAAYMTTRHPDYAVLAARIAISNLHKETKKIFSQVIEDLYNYVNPINGRPSSMISQTTY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
E + NA L+S +IYDRDF+Y+YFGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 123 EAVKANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHGT 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
D++ AI+TY++MS+++FTHASPTLFN+GTP PQ+SSCFLV M DSI+GIY+TLK CA+I
Sbjct: 183 DVERAIRTYNLMSEKYFTHASPTLFNSGTPHPQMSSCFLVSMTSDSIDGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH+IRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+YL
Sbjct: 243 SKSAGGIGLNVHDIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+F++L+L+KNHGKEE RARDLFYALW+PD+FM RV+ NG W L CP EA GL+D
Sbjct: 303 EPWHADVFDWLDLRKNHGKEESRARDLFYALWIPDMFMRRVEQNGDWPLLCPAEAPGLSD 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G EF++L+ YEREG+AKKV++AQ LW+ IL +Q ETG P+ML+KD N+KSNQ+NLG
Sbjct: 363 VYGEEFDELFLRYEREGRAKKVIKAQKLWYAILEAQTETGNPFMLYKDAANKKSNQKNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY++P E AVCNLASIALP ++ + +D
Sbjct: 423 TIKSSNLCTEIIEYSAPDEVAVCNLASIALPTYINDG--------------------VYD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL EV VT NLNKIID+NYYPV AR+SN+RHRPIGIGVQGLAD F +L + F+S
Sbjct: 463 FKKLHEVVKEVTYNLNKIIDINYYPVPEARKSNMRHRPIGIGVQGLADAFQILKLPFDSD 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
+A++LN IFET+Y+ AL+ S E+A KEG YET+ SP S G Q D+W V P+D W+WG
Sbjct: 523 KAKKLNIQIFETLYHAALEASHELALKEGHYETFPGSPASNGEFQYDLWGVTPTDLWEWG 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ + K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN LL
Sbjct: 583 TLKEKVKKDGIRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVNPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L EMG+W+ +KN+II GS+Q IP IP ++K +YKTVWEI Q +++DM+ DRG +I
Sbjct: 643 KELVEMGLWNDEMKNRIIAHQGSIQNIPNIPSQMKAVYKTVWEISQKSIIDMSADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
DQSQSLNIH+ P F ++TS+HF W +GLKTGMYYLR+RAAA+AI+FTVD + E
Sbjct: 703 DQSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKIQDE 759
>gi|393186080|gb|AFN02837.1| putative ribonucleotide-diphosphate reductase large chain
[Phakopsora pachyrhizi]
Length = 865
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/777 (63%), Positives = 620/777 (79%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V KRDGR+E V FDKITAR+ KL YGL H +P+ +++KV GV+ GVTT +LD LAA
Sbjct: 3 FVYKRDGRRERVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA MTT HPDYA LAARIA+SNLHK TKK FS+ I+D+YN+ N +G + +I+ Y
Sbjct: 63 ETAAYMTTRHPDYAVLAARIAISNLHKETKKIFSQVIEDLYNYVNPINGRPSSMISQTTY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
E + NA L+S +IYDRDF+Y+YFGFKTLERSYLL++ GKV ERPQHMLMRV++GIH
Sbjct: 123 EAVKANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHGT 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
D++ AI+TY++MS+++FTHASPTLFN+GTP PQ+SSCFLV M DSI+GIY+TLK CA+I
Sbjct: 183 DVERAIRTYNLMSEKYFTHASPTLFNSGTPHPQMSSCFLVSMTSDSIDGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH+IRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+YL
Sbjct: 243 SKSAGGIGLNVHDIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+F++L+L+KNHGKEE RARDLFYALW+PD+FM RV+ NG W L CP EA GL+D
Sbjct: 303 EPWHADVFDWLDLRKNHGKEESRARDLFYALWIPDMFMRRVEQNGDWPLLCPAEAPGLSD 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G EF++L+ YEREG+AKKV++AQ LW+ IL +Q ETG P+ML+KD N+KSNQ+NLG
Sbjct: 363 VYGEEFDELFLRYEREGRAKKVIKAQKLWYAILEAQTETGNPFMLYKDAANKKSNQKNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY++P E AVCNLASIALP ++ + +D
Sbjct: 423 TIKSSNLCTEIIEYSAPDEVAVCNLASIALPTYINDG--------------------VYD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL EV VT NLNKIID+NYYPV AR+SN+RHRPIGIGVQGLAD F +L + F+S
Sbjct: 463 FKKLHEVVKEVTYNLNKIIDINYYPVPEARKSNMRHRPIGIGVQGLADAFQILKLPFDSD 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
+A++LN IFET+Y+ AL+ S E+A KEG YET+ SP S G Q D+W V P+D W+WG
Sbjct: 523 KAKKLNIQIFETLYHAALEASHELALKEGHYETFPGSPASNGEFQYDLWGVTPTDLWEWG 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ + K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN LL
Sbjct: 583 TLKEKVKKDGIRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVNPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L EMG+W+ +KN+II GS+Q IP IP ++K +YKTVWEI Q +++DM+ DRG +I
Sbjct: 643 KELVEMGLWNDEMKNRIIAHQGSIQNIPNIPSQMKAVYKTVWEISQKSIIDMSADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
DQSQSLNIH+ P F ++TS+HF W +GLKTGMYYLR+RAAA+AI+FTVD + E
Sbjct: 703 DQSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKIQDE 759
>gi|373108816|ref|ZP_09523097.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 10230]
gi|423129514|ref|ZP_17117189.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 12901]
gi|371646061|gb|EHO11578.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 10230]
gi|371648564|gb|EHO14052.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 12901]
Length = 797
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/819 (62%), Positives = 637/819 (77%), Gaps = 30/819 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GV TS+LD LA
Sbjct: 1 MYVIKRDGRREPVSFDKITDRIRILCYELN-EFVDPVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA LAARIAVSNLHKNTKK FSET++D+Y + N R+G +APLIADD+
Sbjct: 60 AETAASMTVTHPDYALLAARIAVSNLHKNTKKVFSETVEDLYRYVNPRTGQEAPLIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+I K+ LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV++GIH
Sbjct: 120 YEVIKKHGERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDS I+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 180 DDIDSVIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+F+ L+KNHGKEE RARDLF ALW+ DLFM+RV+ + +W+L CPNE GL
Sbjct: 300 LEPWHADVFDFIELRKNHGKEEMRARDLFLALWINDLFMQRVEADEKWTLMCPNECPGLC 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YE EGK ++ ++A+ LW +L +QIETGTPYML+KD N KSNQ+NL
Sbjct: 360 DVYGEEFEQLYLKYENEGKGRRTIKARELWEAVLEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G I+SSNLCTEI+EYTSP E AVCNLASI+LP FV + F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFVEDGQ--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ + L +VT +T NLN++ID NYYPVE A SN+RHRP+G+GVQGLAD FI++ M F S
Sbjct: 460 NHQFLFDVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMMRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
PEA+QLN++IFETIY+ AL S E+A +EG Y T+ SP+SKG Q +MW V S R
Sbjct: 520 PEAKQLNQEIFETIYFAALTASMEMAKEEGAYSTFEGSPISKGEFQYNMWGVKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + +GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMASGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL E+G+W+ +K +I+ +GS+Q I IP +++ +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDFIPADIRELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR+++A DAIKFT++ K
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLNNEK-K 758
Query: 778 EKP----EKPELVVDDETKMAQ-VVCSLTNREECMACGS 811
P E ++ V+D M Q + N E+C CGS
Sbjct: 759 TNPNAIEEVEQVSVEDYQAMLQRARMAANNDEDCEMCGS 797
>gi|225012155|ref|ZP_03702592.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-2A]
gi|225003710|gb|EEG41683.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-2A]
Length = 814
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/788 (64%), Positives = 630/788 (79%), Gaps = 27/788 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E + FDKITAR++KL+YGL+ DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVLKRDGRKEPIMFDKITARIRKLNYGLNP-LVDPVRVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI+VSNLHKNTKKSFSET+ D+Y + N R+G KAPL++D++
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSETMTDLYKYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++II KNA LDS IIY+RDF YD+FGFKTLERSYLLK+ G +VERPQHMLMRVSIGIH
Sbjct: 120 HDIIQKNADKLDSSIIYNRDFGYDFFGFKTLERSYLLKLNGVIVERPQHMLMRVSIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++A++TY +MS+R+FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 EDIEAALETYELMSKRYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL LKKNHGKEE RARDLFYA+W PDLFM+RV+ N W+L CPNE L
Sbjct: 300 VEPWHADIFDFLELKKNHGKEEMRARDLFYAMWTPDLFMKRVEENADWTLMCPNECPDLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ G EF+ +Y YE EG+ ++ ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 NVHGDEFDAMYLKYESEGRGRRTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+P E AVCNLASIALP FV K+ F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASIALPMFV--------------------KDGAF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L +VT VT+NLN++ID NYYPV A+ SN RHRP+G+GVQGLAD FI+L + F S
Sbjct: 460 DHQALYDVTVRVTKNLNRVIDRNYYPVIEAQNSNFRHRPVGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ SSE A +EGPYETY SP++ G Q ++W + S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASSEEAKREGPYETYKGSPIANGEFQHNLWGIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAALRKTVKKQGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL + G+W+ +K +++ ++GSVQ I IPE+LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVDRGLWNEDMKQELMRNNGSVQSIEGIPEDLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ K+TS+HF W GLKTGMYYLR+++A DAIKFT+DT K
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYGWKSGLKTGMYYLRTKSAVDAIKFTLDT---K 756
Query: 778 EKPEKPEL 785
K + PE+
Sbjct: 757 SKAKVPEV 764
>gi|66810005|ref|XP_638726.1| ribonucleotide reductase large subunit [Dictyostelium discoideum
AX4]
gi|74854399|sp|Q54Q71.1|RIR1_DICDI RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|60467345|gb|EAL65376.1| ribonucleotide reductase large subunit [Dictyostelium discoideum
AX4]
Length = 870
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/780 (65%), Positives = 624/780 (80%), Gaps = 16/780 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLK---KLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLD 57
MYVVKRDG +E V FDKIT+R+ ++ L+++ DP+ V+QKV +GV+ GV T++LD
Sbjct: 16 MYVVKRDGTKENVSFDKITSRISFLCEMEPKLNSDIVDPIEVAQKVVSGVFPGVKTTELD 75
Query: 58 ELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIA 117
LAAETAA M+T HPDY LAARI+VSNLHK T KSF ET+K Y N +S L APL++
Sbjct: 76 NLAAETAAYMSTRHPDYGILAARISVSNLHKQTSKSFVETVKKQYEFINPKSNLLAPLVS 135
Query: 118 DDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIG 177
++YEI+MK+ L+S I Y RDFDYD+FGFKTLERSYL ++ GK+VERPQHMLMRVSIG
Sbjct: 136 KELYEIVMKHGERLESVIDYYRDFDYDFFGFKTLERSYLHRINGKIVERPQHMLMRVSIG 195
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH +D++SAI TY +S++ FTHA+PTLFNAGTP PQ+SSCFLV MK+DSI+GIY+TLK+
Sbjct: 196 IHGEDLESAINTYKRLSEKLFTHATPTLFNAGTPSPQMSSCFLVQMKEDSIDGIYDTLKQ 255
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG++VH IRA SYIRGTNGTSNG+VPMLRVFNDTARYVDQGGGKRKGAF
Sbjct: 256 CALISKSAGGIGIAVHKIRAAQSYIRGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGAF 315
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWHAD+FEF++LKKN GKEE RARDLFYALWV D+FMERV+ NG W+LFCPNEA
Sbjct: 316 AVYLEPWHADVFEFIDLKKNTGKEEMRARDLFYALWVSDIFMERVEQNGDWALFCPNEAP 375
Query: 358 GLADCWGAEFEKLYTHYEREGK-AKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSN 416
GLA+ E LY YE ++V++AQ LWF I+ SQ+ETGTP++L+KD CN KSN
Sbjct: 376 GLAETHSEEHRALYLKYEATPDLPRRVIKAQELWFAIMESQVETGTPFILYKDACNAKSN 435
Query: 417 QQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSK 476
Q+NLGTI SSNLCTEII+YTSP E AVCNLASIALP+FVR+K VGS K
Sbjct: 436 QKNLGTISSSNLCTEIIQYTSPDEIAVCNLASIALPKFVRQK-----------VGSTDPK 484
Query: 477 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+ FD + L E+T ++T NLN IID NYYPV A+ SNLRHRPIGIG+QGLAD FI + M
Sbjct: 485 EKEFDHQFLFEITKLITVNLNVIIDRNYYPVAEAKTSNLRHRPIGIGIQGLADVFIKMRM 544
Query: 537 AFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD 596
F+S A +LN +I ETIY+ AL S E+A ++G YE++ SP SKGILQ DMWNV PS
Sbjct: 545 PFDSVAAAKLNVEIAETIYFAALTASHELAIRDGTYESFKGSPASKGILQFDMWNVTPSS 604
Query: 597 RWDWGVLRD-MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RW+W L+D +++K G+RNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +
Sbjct: 605 RWNWAELKDNIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFTI 664
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VNK LL DL E+GIWSP +KN+I+ GS+Q I IP++LK +YKTVWEI+Q TL+DMA
Sbjct: 665 VNKQLLEDLMELGIWSPEMKNQIVAARGSIQSIGGIPDDLKELYKTVWEIRQRTLIDMAA 724
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG +IDQSQS N+ + +P F K+TS+HF +W +GLKTGMYYLR+R AADAI+FTVD V
Sbjct: 725 DRGAFIDQSQSFNVFIAEPTFAKLTSMHFYSWKKGLKTGMYYLRTRPAADAIQFTVDPIV 784
>gi|297447|emb|CAA46232.1| ribonucleotide reductase, large subunit [Schizosaccharomyces pombe]
Length = 811
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/834 (61%), Positives = 641/834 (76%), Gaps = 46/834 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T+K FS ++ ++++ N ++ AP+I+D I
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+MK+ LDS IIYDRDF Y++FGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TY++MSQR+FTHASPTLFNAGTPRPQLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNGIVPM+RV+N+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGGIGIYIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ +FL L+K HG E+ RAR +FYALW+PDLFM+RV+ N QW+ FCPNEA GLA
Sbjct: 301 LEPWHADVMDFLELRKTHGNEDFRARQMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EF LY YE+E + ++ + AQ +W+ IL SQ+ETG P+ML+KD+CNRKSNQ+N+
Sbjct: 361 DVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCNRKSNQKNV 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY+SP E AVCNLAS+ALP F+++ +
Sbjct: 421 GTIRSSNLCTEIVEYSSPDEVAVCNLASVALPTFIKDGK--------------------Y 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +V +VT NLNKIIDVNYYPV ARRSN+RHRP+G+GVQGLAD F L + FES
Sbjct: 461 NFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A++LN IFETIY+ AL+ S EIA EG YE+Y SP +GILQ DMWNV P+D WDW
Sbjct: 521 AGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPCIQGILQYDMWNVNPTDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
++ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 AEFKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E +W+ +KNK++ DGS+Q IPEIP++LK +YKTVWEI Q T++D A DRG +
Sbjct: 641 LKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK- 779
IDQSQSLNIH+ P++ K+TS+HF W +GLKTGMYYLR+ AA+ AIKFTVD + +
Sbjct: 701 IDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARN 760
Query: 780 ----------------------PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
P K E+ + +E +A CS+ N E C C +
Sbjct: 761 EESNEENKKPVIKNGKAEISAEPTKEEIDIYNEKVLA---CSIKNPEACEMCSA 811
>gi|367017520|ref|XP_003683258.1| hypothetical protein TDEL_0H01880 [Torulaspora delbrueckii]
gi|359750922|emb|CCE94047.1| hypothetical protein TDEL_0H01880 [Torulaspora delbrueckii]
Length = 886
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 627/775 (80%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKEHVRFDKITARISRLCYGLDPAHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ + +++N+ N ++G+ +P+I+ ++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSQVVSELFNYVNPKNGVHSPMISQEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K+ L+S I+YDRDF+++YFGFKTLERSYLL++ G+V ERPQHM+MRV++GIH
Sbjct: 121 MDIVNKHKDELNSAIVYDRDFNFNYFGFKTLERSYLLRINGEVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAI+TY++MS R+F HASPTLFNAGTPRPQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 181 DDIESAIETYNLMSLRYFIHASPTLFNAGTPRPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RVQ NG+W+LF P+EA GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVQENGEWTLFSPSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY Y EG+ +K ++AQ LW+ IL SQ ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DVYGDEFEALYERYVAEGRGRKTIKAQKLWYAILESQTETGTPFMLYKDACNIKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY++P ETAVCNLASIALP ++ D K +++
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPSCIQVAD--------------DGKTQWY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL ++ ++T NLNK+ID NYYPV AR SN+R+RP+ +GV GLAD F++L + FES
Sbjct: 467 DFAKLHKIAKVITRNLNKVIDRNYYPVPEARNSNMRNRPMALGVNGLADVFMMLRVPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ +L+ S E+A K+GPY TY SP+S+GILQ D+WN PSD WDW
Sbjct: 527 QEAKDLNIQIFETIYHASLEASCELAKKDGPYSTYEGSPISQGILQYDLWNTKPSDLWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I + GVRNSLL+APMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 DTLKKSIKEYGVRNSLLLAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K II D+GS+Q +P IP+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 647 LRDLVDLGIWDDSMKQHIITDNGSIQNLPNIPQELKDLYKTVWEISQKTIIEMAADRAVY 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D SV
Sbjct: 707 IDQSQSLNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSV 761
>gi|423133179|ref|ZP_17120826.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CIP 101113]
gi|371649235|gb|EHO14716.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CIP 101113]
Length = 797
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/819 (62%), Positives = 636/819 (77%), Gaps = 30/819 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GV TS+LD LA
Sbjct: 1 MYVIKRDGRREPVSFDKITDRIRILCYELN-EFVDPVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA LAARIAVSNLHKNTKK FSET++D+Y + N R+G +APLIADD+
Sbjct: 60 AETAASMTVTHPDYALLAARIAVSNLHKNTKKVFSETVEDLYRYVNPRTGQEAPLIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+I K+ LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV++GIH
Sbjct: 120 YEVIKKHGERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDS I+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 180 DDIDSVIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+F+ L+KNHGKEE RARDLF ALW+ DLFM+RV+ + +W+L CPNE GL
Sbjct: 300 LEPWHADVFDFIELRKNHGKEEMRARDLFLALWINDLFMQRVEADEKWTLMCPNECPGLC 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YE EGK ++ ++A+ LW +L +QIETGTPYML+KD N KSNQ+NL
Sbjct: 360 DVYGEEFEQLYLKYENEGKGRRTIKARELWEAVLEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G I+SSNLCTEI+EYTSP E AVCNLASI+LP FV + F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFVEDGQ--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ + L +VT +T NLN++ID NYYPVE A SN+RHRP+G+GVQGLAD FI++ M F S
Sbjct: 460 NHQFLFDVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMMRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
PEA+QLN++IFETIY+ AL S E+A +EG Y T+ SP+SKG Q +MW V S R
Sbjct: 520 PEAKQLNQEIFETIYFAALTASMEMAKEEGAYSTFEGSPISKGEFQYNMWGVKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + +GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMASGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL E+G+W+ +K +I+ +GS+Q I IP +++ +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDFIPADIRELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR+++A DAIKFT++ K
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLNNEK-K 758
Query: 778 EKPEKPELV----VDDETKMAQ-VVCSLTNREECMACGS 811
P E V V+D M Q + N E+C CGS
Sbjct: 759 TNPNAIEEVGQVSVEDYQAMLQRARMAANNDEDCEMCGS 797
>gi|426195743|gb|EKV45672.1| hypothetical protein AGABI2DRAFT_223838 [Agaricus bisporus var.
bisporus H97]
Length = 868
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/777 (64%), Positives = 618/777 (79%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V KR R+E V FDKIT+R++KL YGL T + DPV V+QKV GVY+GVTT +LD LA+
Sbjct: 3 FVFKRGIRKERVQFDKITSRIEKLCYGLDTNYVDPVEVTQKVVQGVYQGVTTVELDNLAS 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIA+SNLHK TKK+FS+ I D+Y++ N ++G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYAVLAARIAISNLHKETKKTFSQVISDLYHYINPKNGKPAGMISKETY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+++MK+A L+S IIY RDF+Y+YFGFKTLERSYLL++ +V ERPQHM+MRV++GIH +
Sbjct: 123 DVVMKHADTLNSAIIYTRDFNYNYFGFKTLERSYLLRINNRVAERPQHMIMRVAVGIHGE 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID ++TY++MS+R+FTHASPTLFNAGTP PQLSSCFLVCMKDDSIEGIY+TLK CA+I
Sbjct: 183 DIDRVMETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKSCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+F+FL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG WSLFCP+EA GL +
Sbjct: 303 EPWHADVFDFLDLRKNHGKEEARARDLFYALWIPDLFMKRVEANGDWSLFCPSEAPGLHE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EFE LY YE+EG+ +K + AQ LW+ IL SQIETG P+M++KD N KSNQ+NLG
Sbjct: 363 VWGPEFEALYEKYEKEGRQRKTMPAQKLWYAILESQIETGGPFMVYKDHANSKSNQKNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY+SP ETAVCNLAS+ALP F+ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASLALPTFI--------------------NNGKYD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL EV + NLN+IIDVNYYP+ ARRSN+RHRPIGIGVQGLADTF+ L M F+SP
Sbjct: 463 FQKLHEVAKVAAFNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADTFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA+ LN IFETIY+ AL+ SSE+A EG YETY SPVS+G LQ D+W + P+D WDW
Sbjct: 523 EAKLLNIQIFETIYHGALEASSEMAVSEGRYETYEGSPVSQGQLQYDLWGITPTDLWDWT 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I++ G+RNSLLV+PMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKQQIARTGIRNSLLVSPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L + +W +KN II +GSVQ IP IP ++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 643 RELVGLDLWDDNMKNMIIAHNGSVQNIPNIPADVKAIYKTVWEISQKKVLDLAADRGPFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD SV +
Sbjct: 703 CQSQSLNVHLQSPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSVLNQ 759
>gi|365961082|ref|YP_004942649.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
columnare ATCC 49512]
gi|365737763|gb|AEW86856.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
columnare ATCC 49512]
Length = 803
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/824 (62%), Positives = 646/824 (78%), Gaps = 34/824 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ + D V V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITDRIKKLCYGLN-DMVDAVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT HPDYA LAARIA+SNLHKNTKKSFSET+ DM+++ + R+G APLI+D++
Sbjct: 60 AETAAAMTVTHPDYAQLAARIAISNLHKNTKKSFSETMNDMFHYVSPRTGKDAPLISDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++IIM+N+A LDS IIY+RDF+YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV+IGIH
Sbjct: 120 HKIIMENSAFLDSHIIYNRDFNYDYFGFKTLERSYLLKINGKIAERPQHMLMRVAIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D++SAI+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 NDLESAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+E WHADI +FL+LKKNHGKEE RARDLFYA+W DLFM+RV+++ +W+L CPNE GL
Sbjct: 300 IETWHADIMDFLDLKKNHGKEEMRARDLFYAMWTSDLFMKRVESDDKWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LYT YE E + +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DVYGDEFEALYTKYENEARGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTS E AVCNLAS++LP FV E F
Sbjct: 420 GTIRSSNLCTEIMEYTSADEIAVCNLASLSLPMFVDEGK--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ E L +VT VT NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L M F S
Sbjct: 460 NHELLYKVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
+A++LN++IFET+Y+ A++TS E+A +EGPY T+ SP+S+G Q ++W V S R
Sbjct: 520 DDAKKLNQEIFETMYFAAVETSMEMAKEEGPYSTFKGSPISEGQFQYNLWGVTDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + + GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVIEYGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL + G+W+ +K +I+ +GSVQ I IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVKCGLWNEDLKQEIMRHNGSVQNIDRIPQDLKDLYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD----T 773
G +IDQSQSLN+ M+ F K+TS+HF W GLKTGMYYLR++AA DAIKFT++ T
Sbjct: 700 GYFIDQSQSLNLFMEGATFSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLNNEKKT 759
Query: 774 SVFKEKPEKPELVVDDETKMAQVVCSLTNR------EECMACGS 811
E P++ ELV + A+ ++ R E+C CGS
Sbjct: 760 EPTIESPKELELVAPEGEMAAEEFRAMIERSRNAEPEDCEMCGS 803
>gi|336171887|ref|YP_004579025.1| ribonucleoside-diphosphate reductase subunit alpha [Lacinutrix sp.
5H-3-7-4]
gi|334726459|gb|AEH00597.1| ribonucleoside-diphosphate reductase, alpha subunit [Lacinutrix sp.
5H-3-7-4]
Length = 827
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/793 (63%), Positives = 629/793 (79%), Gaps = 25/793 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E + FDKITAR++KL YGL+ E DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVLKRDGRKEPIMFDKITARVRKLCYGLN-ELVDPIKVAMRVIDGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI+VSNLHKNTKK+FS+ + D+Y + N R+G KAPL++D++
Sbjct: 60 AEQAATMTTAHPDYARLAARISVSNLHKNTKKTFSDVMTDLYQYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +IM+N LDS IIY+RDF YDYFGFKTLERSYLLK+ G++ ERPQHMLMRVSIGIH
Sbjct: 120 YNVIMENKEKLDSAIIYNRDFGYDYFGFKTLERSYLLKINGEIAERPQHMLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+D+A++TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 NDLDAALETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF FL+LKKNHG EE RARDLFYA+W+PDLFM+RVQ + QW+L CPNE GL
Sbjct: 300 IEPWHADIFNFLDLKKNHGAEELRARDLFYAMWMPDLFMKRVQEDAQWTLMCPNECPGLC 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D EFE LYT YE EGK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DVHSEEFEALYTKYEAEGKGRKSIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTS E AVCNLASIALP FV KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSEDEVAVCNLASIALPMFV--------------------KNGEF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +T VT+NLNK+ID NYYPV+ A SN RHRP+G+GVQGLAD FI L M F S
Sbjct: 460 DHKELFRITKRVTKNLNKVIDRNYYPVKEAENSNFRHRPVGLGVQGLADAFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV---IPSDR 597
A+QLN+DIFET+YY A+ S E A +GPY+TY SP+SKG Q ++WN+ S R
Sbjct: 520 DAAKQLNQDIFETLYYAAVTASMEEAQVDGPYQTYEGSPMSKGEFQHNLWNIQEDTLSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR ++K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWEKLRKQVAKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL ++G+W+ +KN+I+ +GS+Q + IP+++K +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVDLGLWNEDLKNEIMRANGSIQHVENIPQDIKDLYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ K+TS+HF W GLKTGMYYLR+++A DA K T+ + K
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAKKVTISRAT-K 758
Query: 778 EKPEKPELVVDDE 790
P E+ VD++
Sbjct: 759 AAPVTKEVAVDND 771
>gi|255724148|ref|XP_002547003.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
gi|240134894|gb|EER34448.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
Length = 865
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 628/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL H +PV ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEPVRFDKITARVQRLCYGLDPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARIAVSNLHK T K +S+ + +Y + N ++GL +P+I+ +
Sbjct: 61 AEIAATMTTVHPDYAVLAARIAVSNLHKQTTKQYSKVSQALYEYVNPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+IIM++ L+S I+YDRDF+Y+YFGFKT+ERSYLL++ GKV ERPQH++MRV+IGIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFNYNYFGFKTMERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI I+TY++MSQR+FTH SP LFNAGTPRPQ+SSCFL+ MKDDSIEGIY+TLK CA+
Sbjct: 181 KDIPRVIETYNLMSQRYFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GL+
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YE+E + ++ ++AQ LW+ IL++Q ETGTP+ML+KD CN K+NQ+NL
Sbjct: 361 DVYGDEFEELYTRYEKENRGRQTIKAQKLWYAILSAQTETGTPFMLYKDACNTKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P E AVCNLASIALP FV + N ++
Sbjct: 421 GVIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVEHDE----------------SNTWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL EVT +VT NLN++ID NYYPV A RSN+RHRPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFEKLHEVTKVVTRNLNRVIDRNYYPVPEAERSNMRHRPIALGVQGLADAFMSLRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A+++S E+AA+EG YE+Y SP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVESSIELAAEEGVYESYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ +K+ II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LKDLVDLGIWNDAMKSNIISNNGSIQGLPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKLV 759
>gi|372209391|ref|ZP_09497193.1| ribonucleoside-diphosphate reductase subunit alpha
[Flavobacteriaceae bacterium S85]
Length = 793
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/814 (61%), Positives = 648/814 (79%), Gaps = 24/814 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDG +E+V FDKITAR++K+ YGL+ DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVIKRDGHKESVMFDKITARIRKICYGLNP-IVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI+VSNLHKNTKKSFS+T+ ++Y + N R+GL++PL++D++
Sbjct: 60 AEIAATMTTAHPDYAKLAARISVSNLHKNTKKSFSKTMSELYGYVNPRTGLESPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I NAA LDS I+YDRDF+YD+FGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 120 YKVIQDNAALLDSAIVYDRDFNYDFFGFKTLERSYLLKINGKIAERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TY++MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 NDIEEAIETYNLMSKKFFTHATPTLFNSGTPKPQMSSCFLLQMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYIRGTNGTSNGI+PML+V+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIRGTNGTSNGIIPMLKVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+L+KN G EE RARDLF ALW+ DLFM+RV+ NG W+L CPNE GL
Sbjct: 300 IEPWHADIFDFLDLRKNTGAEEKRARDLFLALWISDLFMKRVEENGDWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LYT YE +GK +K ++A+ LW ++L +QIETG PYML+KD NRKSNQ+NL
Sbjct: 360 DTYGEEFEALYTQYEAQGKGRKTIKARELWEKVLEAQIETGNPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G I+SSNLCTEI+EYT+ E AVCNLASIA+P FV ++G K +F
Sbjct: 420 GVIRSSNLCTEIMEYTAKDEVAVCNLASIAIPMFVE-------------TNNKGEK--YF 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ +KL +V VT NL+ +ID NYYPV+ A SN+RHRP+G+G+QGLAD FI+L + F S
Sbjct: 465 NHDKLYKVVKKVTRNLDTVIDRNYYPVKEAENSNMRHRPVGLGIQGLADAFIMLRLPFTS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA+ LNKDIFET+Y+ A+++S EIA+K+G Y T+ SP+S+G Q ++W V S R
Sbjct: 525 DEAKALNKDIFETLYFAAVESSMEIASKKGAYSTFEGSPMSQGEFQFNLWGVKDEELSGR 584
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR+ + KNGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 585 WDWATLREQVKKNGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 644
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL E+G+W+ +K +++ +GS+Q I IP +LK +YKTVWE+ ++DM+ R
Sbjct: 645 KHLLEDLVELGLWNNDLKEELMRANGSIQHIEGIPADLKELYKTVWELSMKDIIDMSRQR 704
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ PN+ K+TS+HF W GLKTGMYYLR+++A +AIKFT+ K
Sbjct: 705 GYFIDQSQSLNLFMESPNYSKLTSMHFYAWKSGLKTGMYYLRTKSAVNAIKFTLSND--K 762
Query: 778 EKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
++ +KP + E A ++ S N ++C CGS
Sbjct: 763 KQEDKP---MSTEEFKAMMLQSKENPDDCEMCGS 793
>gi|156838441|ref|XP_001642926.1| hypothetical protein Kpol_411p13 [Vanderwaltozyma polyspora DSM
70294]
gi|156113506|gb|EDO15068.1| hypothetical protein Kpol_411p13 [Vanderwaltozyma polyspora DSM
70294]
Length = 883
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/781 (62%), Positives = 627/781 (80%), Gaps = 14/781 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ +L YGL H DPV V+Q++ GVY+GVTT +LD LA
Sbjct: 1 MYVIKRDGREEPVRFDKITARISRLCYGLDPNHIDPVKVTQRIITGVYEGVTTYELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAAR+AVSNLHK T K FS+ I +++++ N + APLI+ D+
Sbjct: 61 AETAAYMTTVHPDYAVLAARLAVSNLHKQTTKVFSKVIDELHHYVNPENNKPAPLISKDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ +M N L+S I+YDRDF+Y+YFGFKTLERSYLL+++GKV ERPQHM+MRV+IGIH
Sbjct: 121 YDTVMANKDELNSAIVYDRDFNYNYFGFKTLERSYLLRMKGKVAERPQHMVMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI++Y++MSQR+FTHASPTLFNAGTPRPQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 181 NDIKAAIESYNLMSQRYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAMALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF P+EA GL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENADWTLFSPSEAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFE LY Y EG+ KK ++AQ LW+ IL +Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 EVYGEEFEALYNRYVEEGRGKKTIKAQKLWYSILEAQTETGTPFMLYKDACNLKSNQRNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY++P ETAVCNLASIALP F+ + S+ K F+
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIEK--------------SKDEKQSFY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL ++ +VT NLN++ID NYYPV+ A+ SN RHRPI +GVQGLAD F+LL + FES
Sbjct: 467 NFKKLHDIAKVVTRNLNRVIDRNYYPVQEAKNSNFRHRPIALGVQGLADAFMLLRIPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFET+Y+ AL+ S E+A +EG Y+T+ SP S+GILQ DMWN P+D WDW
Sbjct: 527 KEAKELNIHIFETLYHGALEASCELAQEEGAYQTFKGSPASEGILQFDMWNRKPTDLWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I +G+RNSL++APMPTASTSQILG NECFEP+TSN+Y RRVLSGEF +VN +L
Sbjct: 587 DTLKSNIIAHGIRNSLVMAPMPTASTSQILGYNECFEPFTSNMYQRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ ++K +I D+GS+Q +P +P+ELK +YKTVWEI Q T++DM+ DR +
Sbjct: 647 LRDLVDLGIWNESMKQHLITDNGSIQNLPNVPQELKDLYKTVWEISQKTIIDMSADRSAF 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQS S+NIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V ++
Sbjct: 707 IDQSHSMNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKVAEKAG 766
Query: 781 E 781
E
Sbjct: 767 E 767
>gi|406604875|emb|CCH43750.1| ribonucleoside-diphosphate reductase subunit M1 [Wickerhamomyces
ciferrii]
Length = 877
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/775 (63%), Positives = 628/775 (81%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRREPVKFDKITARISRLCYGLDPAHIDAVKITQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS + ++YN+ N R+G +P+++ D
Sbjct: 61 AETCAYMTTIHPDYATLAARIAISNLHKQTTKQFSAVVDELYNYINPRTGKHSPMLSKDT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+ + +S I+Y+RDF+Y+YFGFKTLERSYLL+V GKV ERPQH++MRV+IGIH
Sbjct: 121 YDIVQEFKDEFNSAIVYNRDFNYNYFGFKTLERSYLLRVDGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S ++TY++MS+R+FTHASPTLFNAGTP PQ+SSCFLV M+DDSI+GIYETLK+CA+
Sbjct: 181 RDIESVVETYNLMSERYFTHASPTLFNAGTPHPQMSSCFLVAMQDDSIDGIYETLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+ DLFM+RV++NG+W+LF PNEA GL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWISDLFMKRVESNGEWTLFSPNEAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFE+LY YE+EG+ +K V+AQ LW+ IL +Q ETGTPYML+KD CN+K+NQ+NL
Sbjct: 361 ETYGDEFEELYERYEKEGRGRKTVKAQKLWYAILEAQTETGTPYMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLCTEI+EY+SP E AVCNLASIALP F+ S K +F+
Sbjct: 421 GIIKSSNLCTEIVEYSSPDEVAVCNLASIALPAFIEV--------------SADRKTQFY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FE+L ++ +VT+NLN+IID N+YPVE ARRSN+R+RPI +GVQGLAD F+ L + FES
Sbjct: 467 NFEQLHKIAKVVTKNLNRIIDRNFYPVEEARRSNMRNRPIALGVQGLADAFMALRLPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A++LN IFETIY+ A++ S E+A KEG YET+ SP S+G+LQ D+W+ P+ W+W
Sbjct: 527 QKAKELNIQIFETIYHAAVEASVELAKKEGAYETFQGSPASQGLLQFDLWDQKPTGLWNW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ + K GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 587 DDLKADVVKYGVRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W +K+ II D+GS+Q +P IP+ELK +YKTVWEI Q T++DMA DR Y
Sbjct: 647 LRDLVDLGVWDDAMKSHIIADNGSIQNLPNIPKELKDLYKTVWEISQKTVIDMAADRSAY 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FTVD+SV
Sbjct: 707 IDQSQSLNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTVDSSV 761
>gi|328875304|gb|EGG23669.1| ribonucleotide reductase large subunit [Dictyostelium fasciculatum]
Length = 942
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/800 (64%), Positives = 624/800 (78%), Gaps = 36/800 (4%)
Query: 1 MYVVKRDGRQEAV------------------HFDKITARLK---KLSYGLSTEHCDPVLV 39
M+VVKRDG + AV +DKIT RL+ L L T DP +
Sbjct: 74 MFVVKRDGTRVAVCNRPTSTQLYFYKKEIDVKYDKITTRLQYLCDLEPKLDTNIIDPSEI 133
Query: 40 SQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIK 99
+QKV +GV+ GV T++LD LAAETAA M+T HPDYA LAARIAVSNLHK T +SF ET+K
Sbjct: 134 TQKVASGVFPGVKTTELDNLAAETAAYMSTKHPDYAVLAARIAVSNLHKQTHESFLETVK 193
Query: 100 DMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + + ++G APL++D+I + K+ +++ I Y RDF+YD+FGFKTLERSYL +V
Sbjct: 194 LQHGYVSPKTGAPAPLVSDEILALANKHVDRIEAAIKYTRDFEYDFFGFKTLERSYLHRV 253
Query: 160 QGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCF 219
++ERPQH+LMRVS+GIH DDID+AI TY +S R+FTHA+PTLFNAGT PQ+SSCF
Sbjct: 254 NDMIIERPQHLLMRVSLGIHGDDIDAAIDTYDQLSNRYFTHATPTLFNAGTNSPQMSSCF 313
Query: 220 LVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVF 279
LV MKDDSIEGIY+TLK+CA+ISKSAGGIG++VH IRA SYIRGTNGTSNG+VPMLRVF
Sbjct: 314 LVQMKDDSIEGIYDTLKQCALISKSAGGIGIAVHKIRAARSYIRGTNGTSNGLVPMLRVF 373
Query: 280 NDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFM 339
NDTARYVDQGGGKRKGAFAVYLEPWH+DIFEFL+LKKNHGKEE RARDLFYALWV DLFM
Sbjct: 374 NDTARYVDQGGGKRKGAFAVYLEPWHSDIFEFLDLKKNHGKEEMRARDLFYALWVSDLFM 433
Query: 340 ERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYERE-GKAKKVVQAQNLWFEILTSQI 398
ERV+ N +WSLFCPNEA GLADC+G +F LY YE+ G A+KVV+AQ+LWF I+ SQI
Sbjct: 434 ERVEQNAEWSLFCPNEAPGLADCYGDKFRDLYLSYEQTPGLARKVVKAQDLWFAIIDSQI 493
Query: 399 ETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK 458
ETGTPY+L+KD CN KSNQ+NLGTI+ SNLCTEII+YTS E AVCNLASIALP+FV+
Sbjct: 494 ETGTPYILYKDACNEKSNQKNLGTIQCSNLCTEIIQYTSADEVAVCNLASIALPKFVK-- 551
Query: 459 DVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHR 518
S PS + FD LAE+T I+T NLNKIID N+YPVE ARRSN+RHR
Sbjct: 552 ----RSSPSAVAS--------FDHNHLAEITRIITRNLNKIIDRNFYPVEEARRSNMRHR 599
Query: 519 PIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNS 578
P GIG+QGLAD FI L M F+SP A LNK+I ETIYY +L S ++A ++GPYET+ S
Sbjct: 600 PTGIGIQGLADVFIALRMPFDSPAAAVLNKEIAETIYYASLDASCQLAERDGPYETFAGS 659
Query: 579 PVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P S+GILQ DMW+V PS RWDW L+ I K+G+RNSLLVAPMPTASTSQILGNNECFEP
Sbjct: 660 PASQGILQFDMWDVQPSARWDWAALKQRIVKHGLRNSLLVAPMPTASTSQILGNNECFEP 719
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
YTSNIYSR+VL+GEF VVNK LL DL +G+W+P +KN+II + GSVQ + IP++LK +
Sbjct: 720 YTSNIYSRKVLAGEFTVVNKQLLQDLMALGLWTPEMKNQIIANRGSVQNVQGIPDDLKEL 779
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
YK+ WEI+Q TL+DMA DRG +IDQSQS N+ + +PNF K+TS+HF W +GLKTGMYYL
Sbjct: 780 YKSAWEIRQRTLIDMAADRGAFIDQSQSFNVFIAEPNFAKLTSMHFYAWKKGLKTGMYYL 839
Query: 759 RSRAAADAIKFTVDTSVFKE 778
R+RAAADAI+FTVD + +
Sbjct: 840 RTRAAADAIQFTVDQQMLTQ 859
>gi|241951096|ref|XP_002418270.1| ribonucleoside-diphosphate reductase large chain 1, putative;
ribonucleotide reductase large subunit 1, putative;
ribonucleotide reductase r1 subunit 1, putative [Candida
dubliniensis CD36]
gi|223641609|emb|CAX43570.1| ribonucleoside-diphosphate reductase large chain 1, putative
[Candida dubliniensis CD36]
Length = 854
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/777 (63%), Positives = 630/777 (81%), Gaps = 16/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL+ H +PV ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLNPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARIAVSNLHK T K +S+ KD+Y + N ++GL +P+I+ +
Sbjct: 61 AEIAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSKVSKDLYEYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+IIM++ L+S I+YDRDF Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFSYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI I+TY++MSQR+FTH SP LFNAGTPRPQ+SSCFL+ MKDDSIEGIY+TLK CA+
Sbjct: 181 NDIPRVIETYNLMSQRFFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YE+E + ++ ++AQ LW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DVYGDEFEELYTRYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCNNKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P E AVCNLASIALP FV E D N ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFV-ESD---------------QSNTWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +VT +VT NLN++ID N+YPV A RSN+RHRPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFDKLHDVTKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A +EG YETY SP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASVELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQNLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D + +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIVE 761
>gi|241854846|ref|XP_002415982.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
gi|215510196|gb|EEC19649.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
Length = 766
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/776 (65%), Positives = 630/776 (81%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKR+GR E++HFDKIT+R+ KL YGL+T+ DP +++QKV G+Y GVTT +LD LA
Sbjct: 10 MFVVKRNGRHESIHFDKITSRISKLCYGLNTDFVDPCVITQKVIVGLYPGVTTVELDNLA 69
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAAR+A+SNLHK TKK FSE + D+Y+ NE +G P+I+++
Sbjct: 70 AETAATMTTKHPDYAILAARLAISNLHKETKKVFSEVMTDLYHMVNETNGKSTPMISEET 129
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M NA L+S I+YDRDF+Y+YFGFKTLER++LLK+ GKVVERPQHMLMRVSIGIH
Sbjct: 130 YKIVMNNADFLNSSIVYDRDFNYNYFGFKTLERAHLLKINGKVVERPQHMLMRVSIGIHG 189
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+ SAI+TY++MS++WFT ASPTLFNAGTP+PQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 190 DDLSSAIETYNLMSEKWFTQASPTLFNAGTPKPQLSSCFLLQMKDDSIEGIYDTLKQCAL 249
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+++HNIRA+GSYI GTNGTSNGIVPMLRV+N+TARYVDQGG KR GA A+Y
Sbjct: 250 ISKSAGGIGINIHNIRASGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAIAIY 309
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+FL+LKKN GKEE RARDLFY LW+PDLFM+RV+ +G WSL CP+E+ L
Sbjct: 310 LEPWHADVFDFLDLKKNTGKEESRARDLFYGLWIPDLFMKRVEEDGIWSLMCPHESPHLQ 369
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +FEKLY YE E + ++ V+AQ LW I+ SQ ETGTPYML+KD CNRKSNQ+N+
Sbjct: 370 DVYGEDFEKLYVRYETEKRYRRQVRAQQLWSAIIESQTETGTPYMLYKDACNRKSNQKNV 429
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL RFV F
Sbjct: 430 GTIKCSNLCTEIVEYTSVDEVAVCNLASIALNRFVYHGH--------------------F 469
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL +VT +VT NLNKIIDVNYYP+ A+ SN+RHRPIGIGVQGLAD FILL + F+
Sbjct: 470 DFEKLRQVTRVVTRNLNKIIDVNYYPIPEAKLSNMRHRPIGIGVQGLADAFILLRLPFDC 529
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA ++NK IFETIYY AL+ S E++ K GPYETY SPVS+GILQ DMWNV PS+ WDW
Sbjct: 530 DEACEINKKIFETIYYGALEESCELSKKFGPYETYPGSPVSQGILQYDMWNVTPSNLWDW 589
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSN+Y+RRVLSGEF +VN HL
Sbjct: 590 SALKERIKSFGIRNSLLVAPMPTASTAQILGNNEAMEPYTSNVYTRRVLSGEFQIVNHHL 649
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT +G+W+ +KN++I ++GSVQK+ IP+ELKM+Y+TVWEI Q +++M+ DRG +
Sbjct: 650 LKDLTRLGLWNDNLKNELIANNGSVQKL-NIPKELKMLYRTVWEISQKNILEMSADRGAF 708
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
+DQSQSLNIH+ QP + K+TS+HF W GLKTGMYYLR++ A +AI+FTVD S+
Sbjct: 709 VDQSQSLNIHIAQPTYGKLTSMHFCGWKLGLKTGMYYLRTKPAVNAIQFTVDKSLL 764
>gi|68481362|ref|XP_715320.1| hypothetical protein CaO19.5779 [Candida albicans SC5314]
gi|68481493|ref|XP_715255.1| hypothetical protein CaO19.13201 [Candida albicans SC5314]
gi|7271006|emb|CAB77640.1| ribonucleotide reductase large subunit [Candida albicans]
gi|46436871|gb|EAK96226.1| hypothetical protein CaO19.13201 [Candida albicans SC5314]
gi|46436939|gb|EAK96293.1| hypothetical protein CaO19.5779 [Candida albicans SC5314]
Length = 854
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/775 (63%), Positives = 630/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL+ H +PV ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLNPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARIAVSNLHK T K +S+ KD+Y + N ++GL +P+I+ +
Sbjct: 61 AEIAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSKVSKDLYEYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+IIM++ L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI I+TY++MSQR+FTH SP LFNAGTPRPQ+SSCFL+ MKDDSIEGIY+TLK CA+
Sbjct: 181 NDIPRVIETYNLMSQRFFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YE+E + ++ ++AQ LW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCNNKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P E AVCNLASIALP FV + K+ ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVENDE----------------KSTWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +VT +VT NLN++ID N+YPV A RSN+RHRPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFDKLHQVTKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A +EG YETY SP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQDLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 759
>gi|393231310|gb|EJD38904.1| ribonucleotide reductase alpha subunit [Auricularia delicata
TFB-10046 SS5]
Length = 871
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/777 (64%), Positives = 615/777 (79%), Gaps = 18/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V KR +E V FDKITAR+ KL YGL EH DP+ +++KV GVY GVTT +LD LAA
Sbjct: 3 FVFKRGTPKERVAFDKITARVSKLCYGLDPEHVDPIEITKKVIDGVYAGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA MTT HPDYA LAARIA+SNLHK TKKSFS I+D YN+ N ++G A +I+++ Y
Sbjct: 63 ETAAYMTTKHPDYAILAARIAISNLHKETKKSFSHVIEDCYNYVNPKNGKPAGMISEETY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
++ NA LDS IIYDRDF Y YFGFKTLERSYLL++ G+V ERPQHMLMRV++GIH
Sbjct: 123 RVVKANAELLDSSIIYDRDFHYQYFGFKTLERSYLLRINGRVAERPQHMLMRVAVGIHGA 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI+ AI+TY++MS+R+FTHASPTLFNAGTP PQLSSCFLV MK+DSIEGIY+TLK CA+I
Sbjct: 183 DIERAIETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVTMKEDSIEGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRA GSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLNIHCIRAKGSYIAGTNGHSNGIVPMLRAYDSTARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+F+FL+L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG+WSLFCPNEA GL +
Sbjct: 303 EPWHADVFDFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEENGEWSLFCPNEAPGLHE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
AEFE LY YE+EG+A+K + AQ LW+ IL +QIETG P+ML+KD CN KSNQQNLG
Sbjct: 363 VHSAEFEALYERYEKEGRARKTIPAQKLWYAILEAQIETGGPFMLYKDACNAKSNQQNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEI+EY++P E AVCNLASIALP FV + + +D
Sbjct: 423 TIKSSNLCTEIVEYSAPDEVAVCNLASIALPSFV------------------AADKQSYD 464
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL +V +V NLNKIIDVNYYPV ARRSN+RHRPIGIGVQGLAD F++L + F+S
Sbjct: 465 FQKLHDVAKVVARNLNKIIDVNYYPVPEARRSNMRHRPIGIGVQGLADAFMILRLPFDSA 524
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA++LN IFETIY+ AL+ SSE+AA++GPYET+ SP +G LQ D+W P+D WDW
Sbjct: 525 EARKLNLQIFETIYHAALEASSELAARDGPYETWEGSPAQQGRLQYDLWGATPTDLWDWA 584
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 585 ALKEQIAQTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 644
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L + +W +KN II + GSVQ IP IP+++K IYKTVWEI Q ++DMA DRG +I
Sbjct: 645 RELVDRRLWDDHMKNLIIANGGSVQNIPGIPDDVKAIYKTVWEISQKKVLDMAADRGAFI 704
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD +V KE
Sbjct: 705 CQSQSLNVHLQSPTTGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDAAVLKE 761
>gi|170038940|ref|XP_001847305.1| ribonucleoside-diphosphate reductase large subunit [Culex
quinquefasciatus]
gi|167862546|gb|EDS25929.1| ribonucleoside-diphosphate reductase large subunit [Culex
quinquefasciatus]
Length = 838
Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/857 (61%), Positives = 645/857 (75%), Gaps = 65/857 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E VH DKIT+R++KL YGL+ + DPV ++ KV G+Y GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEEVHLDKITSRIQKLCYGLNMDFVDPVAITLKVINGLYTGVTTQELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT H DYA LAAR+AVSNLHK TKK FS+ + D+YN NE K+P+I+D+
Sbjct: 61 AETAATLTTEHADYAILAARLAVSNLHKETKKHFSDVMADLYNMENEFLKTKSPMISDEH 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+IIM NA L+S IIYDRDF Y+YFGFKTLERSYLLK++GKVVERPQHMLMRV++GIH
Sbjct: 121 YKIIMDNADRLNSAIIYDRDFGYNYFGFKTLERSYLLKIKGKVVERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY+++S+R+FTHASPT+F A T RPQLSSCFL+ M DDSI+GIY+TLK+CA+
Sbjct: 181 LDIDAAIETYNLLSERYFTHASPTMFAAATRRPQLSSCFLLTMSDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+VH IRA G+YI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNVHCIRAKGTYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARD+FYALW+PDLFM+RV+ N W L CP++ GL
Sbjct: 301 LEPWHGDIFEFLDLKKNTGKEEVRARDMFYALWIPDLFMKRVEANEDWCLMCPHDCPGLP 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLYT YE EG+ + V+AQ+LWF I+ SQ+ETG PYML+KD CNRKSNQQN+
Sbjct: 361 ETWGEEFEKLYTTYENEGRYIRKVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNI 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+S E AVCNLASIA+ FV+ ++ +
Sbjct: 421 GTIKCSNLCTEIVEYSSKDEIAVCNLASIAVNMFVK-------------------PDKSY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV+ IVT+NLNKIID+NYYPV A+RSN+RHRPIGIGVQG+AD FIL+ +ES
Sbjct: 462 DFQKLKEVSKIVTKNLNKIIDINYYPVPEAKRSNMRHRPIGIGVQGMADAFILMRFPYES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN+ IFETIYY AL+ S EIA K+G YETY PVSKGILQ DMWN PSD WDW
Sbjct: 522 EEAQKLNQQIFETIYYGALEASCEIAEKDGTYETYDGCPVSKGILQYDMWNKAPSDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE FEPYTSN+Y+RRVLSGEF VVN HL
Sbjct: 582 APLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQVVNHHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KNKII +GS+Q I EIP+ ++ +YKTVWEI T + MA DRG +
Sbjct: 642 LKDLTELELWDDDMKNKIIASNGSIQHIDEIPKHIRELYKTVWEISVKTCIKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQS NIH+ +PN+ K+TS+HF W GLKTGMYYLR++ A +AI+FTVD +
Sbjct: 702 IDQSQSFNIHVAEPNYGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKVKLGQTQ 761
Query: 779 -------KPEKPELVVDDET-------------------------------------KMA 794
P K L+ T +MA
Sbjct: 762 SAQNGTTSPSKSMLMNGSSTPRKMNGESSMAMADTSAIAAGTAGETSMNGSYAERNRRMA 821
Query: 795 QVVCSLTNREECMACGS 811
++VCSL N+E+CM CGS
Sbjct: 822 EMVCSLENKEDCMMCGS 838
>gi|238882110|gb|EEQ45748.1| ribonucleoside-diphosphate reductase large chain [Candida albicans
WO-1]
Length = 854
Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/775 (63%), Positives = 630/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL+ H +PV ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLNPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARIAVSNLHK T K +S+ KD+Y + N ++GL +P+I+ +
Sbjct: 61 AEIAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSKVSKDLYEYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+IIM++ L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI I+TY++MSQR+FTH SP LFNAGTPRPQ+SSCFL+ MKDDSIEGIY+TLK CA+
Sbjct: 181 NDIPRVIETYNLMSQRFFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YE+E + ++ ++AQ LW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCNNKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P E AVCNLASIALP FV + K+ ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVENDE----------------KSTWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +VT +VT NLN++ID N+YPV A RSN+RHRPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFDKLHQVTKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A +EG YETY SP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQDLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 759
>gi|398389296|ref|XP_003848109.1| hypothetical protein MYCGRDRAFT_101786 [Zymoseptoria tritici
IPO323]
gi|339467983|gb|EGP83085.1| hypothetical protein MYCGRDRAFT_101786 [Zymoseptoria tritici
IPO323]
Length = 916
Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/777 (66%), Positives = 622/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++ KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDSAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA LAARIAVSNLHK TKK FS + D+Y++ N ++ AP+I+D+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYHYINPKTNKAAPMISDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRV++GIH
Sbjct: 121 YATVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+SAI+TY+ MS ++FTHASPTLF+AGTP QL+SCFL+ MKDDSI+GIY+TLK CA+
Sbjct: 181 EDIESAIETYNYMSNKYFTHASPTLFSAGTPNAQLASCFLIDMKDDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATG+YI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNVHRIRATGAYISGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHAD+F FL+L+KNHGKEE RARDLFY LWVPDLFM+RV+ N W+L CP+E GLA
Sbjct: 301 IEPWHADVFSFLDLRKNHGKEEVRARDLFYGLWVPDLFMKRVEQNTTWTLMCPHECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +GAEFE+LY YEREGK ++ V+AQ LW+ IL +Q ETGTPY+L+KD N KSNQ+NL
Sbjct: 361 DVYGAEFEELYERYEREGKGRETVRAQKLWYAILEAQTETGTPYILYKDAANSKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEYT+P E AVCNLAS+ALP +V D+ +N F
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTYV---DI---------------ENERF 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL +VT VT+NLNKII+VN+YPV AR+SN RHRPIG+GV GLAD F+ L M F+S
Sbjct: 463 DFEKLHQVTQTVTKNLNKIIEVNHYPVPEARKSNFRHRPIGLGVNGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+QLN IFETIY+ AL S ++AAK GPYETY SPVSKG LQ DMW V P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDLAAKLGPYETYEGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AALKAKIAEHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E G+WS +KN+II D GS+Q+IP IP++LK +YKTVWEI Q +V M+ DRG +
Sbjct: 643 LKDLVERGLWSDNMKNRIIADGGSIQRIPNIPDDLKALYKTVWEISQRHIVQMSADRGAF 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIHM +P K+TS+HF W GLKTGMYYLR+ AA+ I+FTVD + K
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEMLK 759
>gi|365761070|gb|EHN02746.1| Rnr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 886
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/781 (62%), Positives = 627/781 (80%), Gaps = 15/781 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A +TT HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G AP+I+DD+
Sbjct: 61 AETCAYLTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLLK+ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLKINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY++MS ++FTHASPTLFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S KN +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKNSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLNK+ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 466 NFKKLHEIAKVVTRNLNKVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ ++++S E+A ++GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNVQIFETIYHASMESSCELAQRDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I+K+G+RNSL VAPMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DALREDITKHGIRNSLTVAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKVADQAT 765
Query: 781 E 781
E
Sbjct: 766 E 766
>gi|444318263|ref|XP_004179789.1| hypothetical protein TBLA_0C04740 [Tetrapisispora blattae CBS 6284]
gi|387512830|emb|CCH60270.1| hypothetical protein TBLA_0C04740 [Tetrapisispora blattae CBS 6284]
Length = 889
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/776 (63%), Positives = 626/776 (80%), Gaps = 16/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL + H DPV V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVCKRDGRKEPVRFDKITARVSRLCYGLDSNHIDPVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA+LAAR+A+SNLHK T K FS ++++ N+ N + APL+++++
Sbjct: 61 AETAAYMTTIHPDYATLAARLAISNLHKQTTKLFSTVVEELRNYVNPENNKWAPLVSEEL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE + K+ ++S I+YDRDF ++YFGFKTLERSYLLK+ GKV ERPQHM+MRV++GIH
Sbjct: 121 YETVQKHKDEINSAIVYDRDFQFNYFGFKTLERSYLLKMYGKVAERPQHMIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++A++TY++MSQR+FTHASPTLFNAGTPRPQ+SSCFLV MK+DS+EGI++TLKECA+
Sbjct: 181 EDIEAALETYNLMSQRYFTHASPTLFNAGTPRPQMSSCFLVAMKEDSLEGIFDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGG+GV +H+IRATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GA A++
Sbjct: 241 ISKSAGGLGVHIHDIRATGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAIALF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+EA GL+
Sbjct: 301 LEPWHDDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVKENGDWTLFSPSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY Y EGK ++ ++AQ LW+ IL +Q ETGTP++ +KD N+KSNQ+NL
Sbjct: 361 DVYGDEFEALYNRYVEEGKGRRTIKAQKLWYSILEAQTETGTPFICYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF- 479
GTIKSSNLC EIIEY++P ETAVCNLAS+ALP F+++ D N F
Sbjct: 421 GTIKSSNLCCEIIEYSAPDETAVCNLASVALPAFIKKTD---------------DGNSFI 465
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
+DFEKL E+T ++T NLNK+ID NYYPV A+ SN+RHRP+ +GVQGLADTF +L + FE
Sbjct: 466 YDFEKLHEITKVITRNLNKVIDRNYYPVPEAKNSNMRHRPVALGVQGLADTFQILRLPFE 525
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
S EA+ LN IFET+Y+ AL+ S EIAA EGPY TY SPVS+GILQ DMW+V P+D WD
Sbjct: 526 SDEARDLNAHIFETMYHAALEASCEIAAVEGPYSTYEGSPVSQGILQYDMWDVTPTDLWD 585
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I K+GVRNSLL+APMPTASTSQILG NECFEP+TSN+YSRR LSGEF +VN +
Sbjct: 586 WDSLKANIKKHGVRNSLLLAPMPTASTSQILGYNECFEPFTSNMYSRRTLSGEFQIVNPY 645
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL ++GIW +K +I D+GS+QK+P IP+ELK +YKTVWEI Q ++DMA DR
Sbjct: 646 LLRDLVDLGIWDDAMKQHLITDNGSIQKLPNIPQELKELYKTVWEISQKKIIDMAADRSA 705
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+IDQS SLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 706 FIDQSHSLNIHIQAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKI 761
>gi|260061081|ref|YP_003194161.1| ribonucleoside-diphosphate reductase large chain [Robiginitalea
biformata HTCC2501]
gi|88785213|gb|EAR16382.1| probable ribonucleoside-diphosphate reductase large chain
[Robiginitalea biformata HTCC2501]
Length = 812
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/779 (64%), Positives = 624/779 (80%), Gaps = 26/779 (3%)
Query: 15 FDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDY 74
FDKITAR++KL YGLS + DPV V+ +V G+Y GVTTS+LD LAAE AA +TT HPDY
Sbjct: 2 FDKITARVRKLCYGLS-DLVDPVKVAMRVIEGLYDGVTTSELDNLAAEIAATLTTTHPDY 60
Query: 75 ASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSE 134
A LAARI+VSNLHKNTKKSFSET+KD+Y + N R+G KAPL+ADD++E+I K+A LDS
Sbjct: 61 AKLAARISVSNLHKNTKKSFSETMKDLYEYVNPRTGKKAPLVADDVFEVIQKHADTLDSM 120
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMS 194
IIY+RDF YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVS+GIH DD+D+ +TY +MS
Sbjct: 121 IIYNRDFGYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVSVGIHLDDLDAVRETYELMS 180
Query: 195 QRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHN 254
+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSI+GIY TLK+ A IS+SAGGIG+S+HN
Sbjct: 181 KKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYNTLKQTAKISQSAGGIGLSIHN 240
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNL 314
IRATGSYI GTNGTSNG+VPMLRVFNDTARYVDQGGGKRKG+FA+YLEPWHADIF+FL L
Sbjct: 241 IRATGSYIAGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGSFAIYLEPWHADIFDFLEL 300
Query: 315 KKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHY 374
KKNHGKEE RARDLFYA+W+ DLFM+RV+ + +W+L CPNE GL EFE+LY Y
Sbjct: 301 KKNHGKEEMRARDLFYAMWISDLFMKRVEADAEWTLMCPNECPGLYTTHSEEFEELYLKY 360
Query: 375 EREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIE 434
E+EGK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NLGTI+SSNLCTEI+E
Sbjct: 361 EKEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNLGTIRSSNLCTEILE 420
Query: 435 YTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTE 494
YT+ E AVCNLASIALP F+ KN FD ++L VT VT+
Sbjct: 421 YTAEDEVAVCNLASIALPMFI--------------------KNGEFDHKELFRVTKRVTK 460
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETI 554
NLN++ID NYYP++ A SN+RHRPIG+GVQGLADTFILL + F S EA++LN++IFET+
Sbjct: 461 NLNRVIDRNYYPIKEAENSNMRHRPIGLGVQGLADTFILLRLPFTSDEAKKLNREIFETL 520
Query: 555 YYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDRWDWGVLRDMISKNG 611
YY A S E+A +EGPY +Y SP+S+G Q ++W + S RWDW LR I KNG
Sbjct: 521 YYAAATASMEMAKEEGPYSSYEGSPISQGQFQHNLWGIEDKELSGRWDWEKLRKSIKKNG 580
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWS 671
VRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHLL DL +G+W+
Sbjct: 581 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLEDLVSLGLWN 640
Query: 672 PTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHM 731
+K +++ +GS+Q I IP+ +K +Y+TVWE+ ++DM+ RG +IDQSQSLN+ M
Sbjct: 641 ENMKQELMRANGSIQHIDAIPDNIKELYQTVWELSMKDIIDMSRQRGYFIDQSQSLNLFM 700
Query: 732 DQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDE 790
+ N+ K+TS+HF W GLKTGMYYLR++AA DAIKFT+D + K+K E PE VV +E
Sbjct: 701 ENANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNT--KKKVEVPEAVVTEE 757
>gi|392591881|gb|EIW81208.1| ribonucleotide reductase alpha subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 884
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/775 (64%), Positives = 617/775 (79%), Gaps = 20/775 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V KR R+E V FDKITAR+ KL YGL + D + V++KV AGVY+GVTT +LD LAA
Sbjct: 3 FVFKRGTRRETVQFDKITARIAKLCYGLDARYVDTIEVAKKVIAGVYQGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIA+SNLHK TKKSFS+ KD+Y + N ++G A +++ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKSFSQVTKDLYEYVNPKNGKLASMVSKETY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+I+ NA LDS IIY+RDF Y+YFGFKTLERSYLL++ G+V ERPQHM+MRV+IGIH D
Sbjct: 123 DIVQANAELLDSAIIYNRDFSYNYFGFKTLERSYLLRINGRVAERPQHMIMRVAIGIHGD 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI+ ++TY++MS+R+FTHASPTLFNAGTP PQ++SCFLVCMKDDSIEGIY+TL++CA+I
Sbjct: 183 DIEHVLETYNLMSERFFTHASPTLFNAGTPHPQMASCFLVCMKDDSIEGIYDTLRQCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRAT SYI GTNG SNGIVPMLRVF+ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGMNIHCIRATNSYIAGTNGYSNGIVPMLRVFDSTARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWH DI +F +L+KNHGKEE RARDLFYALW+ DLFM+RV+ + WSLFCPNEA GLAD
Sbjct: 303 EPWHPDILDFCDLRKNHGKEESRARDLFYALWINDLFMKRVEADEDWSLFCPNEAPGLAD 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EFE LY YE+EG+A++ + AQ LW+ IL SQIETG P+ML+KD+ NRKSNQQNLG
Sbjct: 363 VWGDEFETLYLKYEKEGRARRTMPAQKLWYSILESQIETGGPFMLYKDSANRKSNQQNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY+SP ETAVCNLAS+ALP F+R+ +D
Sbjct: 423 TIKSSNLCTEIIEYSSPEETAVCNLASLALPTFIRDGK--------------------YD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+ L +V+ ++T NLN+IID NYYPV A RSN+RHRPIG+GVQGLAD F++L M F+SP
Sbjct: 463 FKTLHDVSKVLTYNLNRIIDRNYYPVPEAERSNMRHRPIGLGVQGLADAFMILRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA++LN IFETIY+ AL+ SSE+A K GPYETY SP +G LQ D+W V P+D WDW
Sbjct: 523 EARRLNLQIFETIYHAALEASSELAEKLGPYETYKGSPAEQGQLQYDLWGVTPTDLWDWT 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 ELKAKIARHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL E +W+ +KN II +GSV IP IPE++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 643 RDLVERDLWNDDMKNMIIAHNGSVANIPSIPEDIKQIYKTVWEISQKVVIDLAADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
QSQSLN+H+ P +++TS+HF W +GLKTGMYYLR+R A+ AI+FT++ SV
Sbjct: 703 CQSQSLNVHLQAPTLRQLTSMHFYGWKKGLKTGMYYLRTRPASQAIQFTIEQSVI 757
>gi|389740180|gb|EIM81371.1| ribonucleotide reductase alpha subunit [Stereum hirsutum FP-91666
SS1]
Length = 923
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/792 (63%), Positives = 626/792 (79%), Gaps = 21/792 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KR GR+E V FDKITAR+ KL YGL H +P V+QKV GVY+GVTTS+LD LAA
Sbjct: 17 YVFKRGGRKERVQFDKITARISKLCYGLDNSHIEPAEVAQKVIQGVYQGVTTSELDNLAA 76
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIAVSNLHK+TKK+FS I D+YN+ N ++G A +I+D+ Y
Sbjct: 77 ETAAYLTTKHPDYAILAARIAVSNLHKDTKKNFSHVIADLYNYVNPKTGKAAGMISDETY 136
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
I +NA LDS IIY+RDF+Y++FGFKTLERSYLLK+ G+ ERPQHM+MRV+ GIH
Sbjct: 137 RFISENAERLDSAIIYERDFNYNFFGFKTLERSYLLKINGRTAERPQHMIMRVACGIHGH 196
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
D++ AI+TY++MS+R+FTHASPTLFNAGTP PQL+SCFLVCMKDDSIEGIY+TLK+CA+I
Sbjct: 197 DVERAIETYNLMSERYFTHASPTLFNAGTPHPQLASCFLVCMKDDSIEGIYDTLKQCAMI 256
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+S+HNIRATG+YI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+Y+
Sbjct: 257 SKTAGGIGLSIHNIRATGAYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIYI 316
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+R+ NG W+LF +EA GL +
Sbjct: 317 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRISENGNWTLFSADEAPGLHE 376
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G EFE LY YE+EG+ +K + AQ LW+ I+ +QIETG P+M +KD NRKSNQ+NLG
Sbjct: 377 VYGDEFEALYEKYEKEGRGRKTMPAQKLWYAIMDAQIETGGPFMCYKDAANRKSNQKNLG 436
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
IKSSNLCTEI+EY++P ETAVCNLAS+ALP F+ N ++
Sbjct: 437 VIKSSNLCTEIMEYSAPDETAVCNLASLALPTFI--------------------DNGIYN 476
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL +V +VT NLN++IDVNYYPV AR SN+RHRPIG+GVQGLAD F++L MAF+S
Sbjct: 477 FQKLHDVAKVVTYNLNRVIDVNYYPVPEARNSNMRHRPIGLGVQGLADAFMILRMAFDSD 536
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
A++LN+ IFETIY+ A++ S EIA +EGPYE+Y SP SKG LQ DMW V P+D WDW
Sbjct: 537 AARKLNQQIFETIYHAAVEASCEIAEEEGPYESYEGSPASKGELQYDMWGVTPTDLWDWE 596
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ ++++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 597 ELKAKVAQHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 656
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L E+ +W +KNKII +GS+Q IPEIP+++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 657 RELVELKLWDDDMKNKIIAHNGSIQAIPEIPDDVKAIYKTVWEISQKKVLDLAADRGAFI 716
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-KP 780
QSQSLN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FT+D + ++ K
Sbjct: 717 CQSQSLNVHLQSPTVNQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTLDHKLVEQTKK 776
Query: 781 EKPELVVDDETK 792
+ + +D TK
Sbjct: 777 AQDKAKLDKATK 788
>gi|409124161|ref|ZP_11223556.1| ribonucleoside-diphosphate reductase large chain [Gillisia sp.
CBA3202]
Length = 824
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/798 (63%), Positives = 631/798 (79%), Gaps = 30/798 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDG +E V FDKITAR++KL YGL+ E DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVLKRDGHKEPVMFDKITARIRKLCYGLN-ELVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A MTT+HPDYA LAARI+VSNLHKNTKK+FSE + D++ + N R+G KAPL+AD++
Sbjct: 60 AEVSATMTTSHPDYAKLAARISVSNLHKNTKKTFSEVMTDLHEYVNPRTGKKAPLLADEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++I +N LDS IIY+RDF+YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVSIGIH
Sbjct: 120 QKVIQENKELLDSTIIYNRDFNYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI +AI+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 DDIAAAIETYDLMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+PDLFM+RV+ + W+L CPNE GL
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMQRVEKDENWTLMCPNECPGLF 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D G EFE LY YE EGK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DIHGEEFEALYHKYEEEGKGRKSIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP F++ + F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFIKGNE--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L ++T V +NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI L M F S
Sbjct: 460 DHKELYKITKRVIKNLNKVIDRNYYPVKEAENSNVRHRPVGLGVQGLADAFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
EA+ LN++IFET+Y+ ++ S E+A +EGPY +Y SP+SKG Q +MW + D R
Sbjct: 520 DEAKALNQEIFETLYFASVTASMELAIEEGPYSSYEGSPMSKGEFQYNMWGIKDEDLSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAKLRKQVMKNGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL E +W+ +KN I+ +GSVQ I IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVERNLWTEDVKNAILRANGSVQGIDIIPQDLKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N K+TS+HF W GLKTGMYYLR+++A DAIKFT+
Sbjct: 700 GYFIDQSQSLNLFMENANNSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTL------ 753
Query: 778 EKPEKPELVVDDETKMAQ 795
+K K E V++ +MAQ
Sbjct: 754 KKETKKEPVLESYAEMAQ 771
>gi|319953270|ref|YP_004164537.1| ribonucleoside-diphosphate reductase subunit alpha [Cellulophaga
algicola DSM 14237]
gi|319421930|gb|ADV49039.1| ribonucleoside-diphosphate reductase, alpha subunit [Cellulophaga
algicola DSM 14237]
Length = 825
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/783 (63%), Positives = 628/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E + FDKITAR++KL YGL+ E DP+ VS +V G+Y GVTTS+LD LA
Sbjct: 1 MYVLKRDGRKEPMMFDKITARVRKLCYGLN-ELVDPIKVSMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A MTT HPD+A LAARI+VSNLHKNTKKSF++T+KD+Y + N R+G K+PL++D++
Sbjct: 60 AEISATMTTTHPDFAKLAARISVSNLHKNTKKSFADTMKDLYEYVNPRNGKKSPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++I +NAA LDS IIY+RDF YDYFGFKTLERSYLLK+ G++ ERPQHMLMRVS+GIH
Sbjct: 120 FKVISENAAFLDSTIIYNRDFGYDYFGFKTLERSYLLKINGQIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+++ ++TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 DDLEAVVETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAQ 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLQVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADI+EFL+LKKNHGKEE RARDLFYA+W+PDLFM RV+ N +W+L CPNE L
Sbjct: 300 VEPWHADIYEFLDLKKNHGKEEMRARDLFYAMWIPDLFMRRVEANEEWTLMCPNECPDLF 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
FE +Y YE E K +K V+A++LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 KHHSEVFETMYLKYEAENKGRKTVKARDLWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP F+ KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KNGEF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L VT VT NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L + F S
Sbjct: 460 DHKELFRVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
A+ LN++IFET+Y+ A+ S E+A +EGPY +Y SP+S+G Q ++W + S R
Sbjct: 520 DAAKALNQEIFETLYFAAVTASMEMAKEEGPYSSYEGSPISEGEFQYNLWGIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWDKLRKEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL +G+W+ ++K +++ +GS+Q I IP+++K +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVHLGLWNESLKQELMRANGSIQHIDIIPQDIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ NF K+TS+HF W GLKTGMYYLR+++A DAIKFT+D + K
Sbjct: 700 GYFIDQSQSLNLFMEGANFSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLDNTKKK 759
Query: 778 EKP 780
E P
Sbjct: 760 EVP 762
>gi|50305185|ref|XP_452551.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641684|emb|CAH01402.1| KLLA0C07887p [Kluyveromyces lactis]
Length = 875
Score = 1080 bits (2792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/778 (63%), Positives = 628/778 (80%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDG +E V FDKITAR+ +L YGL +H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGHKEPVQFDKITARVSRLCYGLDAKHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ + D+Y N R+G+ +P+I+D++
Sbjct: 61 AETCAYMTTIHPDYATLAARIAISNLHKQTTKQFSQVVDDLYQWVNPRTGIHSPMISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M N L+S I+YDRDF ++YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YKIVMDNKDTLNSAIVYDRDFQFNYFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ ++TY++MSQR+FTHASPTLFNAGTP PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 NDIERVLETYNLMSQRYFTHASPTLFNAGTPHPQMSSCFLVAMKEDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF PNEA GL
Sbjct: 301 IEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEKNQDWTLFSPNEAPGLP 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE++Y YEREG+ +K V+AQ LW+ IL +Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DAYGEEFEEMYERYEREGRGRKTVKAQKLWYAILEAQTETGTPFMLYKDACNLKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+ PTETAVCNLASIALP F+ S K + +
Sbjct: 421 GTIKSSNLCCEIVEYSDPTETAVCNLASIALPAFIER--------------STDGKTQTY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL + ++T NLN+IID NYYPVETARRSN+RHRPI +GVQGLAD F++L + F+S
Sbjct: 467 NFEKLHSIAKVLTRNLNRIIDRNYYPVETARRSNMRHRPIALGVQGLADAFMMLRLPFDS 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN +IFETIY+ A + S E+A +EG YET+ SP S+G LQ D+W P+ WDW
Sbjct: 527 EEAKKLNIEIFETIYHGACEASMELAKEEGHYETFPGSPASQGQLQFDLWGKTPTALWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I NG+RNSLLVAPMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 NTLKEQIKLNGMRNSLLVAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
LHDL ++GIW +K+ II D+GS+Q +P IP+ELK +YKTVWE+ Q ++DMA DR Y
Sbjct: 647 LHDLVDLGIWDEAMKSHIIADNGSIQNLPNIPQELKDLYKTVWELSQKHIIDMAADRAAY 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D SV ++
Sbjct: 707 IDQSQSLNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSVAEQ 764
>gi|367005242|ref|XP_003687353.1| hypothetical protein TPHA_0J00970 [Tetrapisispora phaffii CBS 4417]
gi|357525657|emb|CCE64919.1| hypothetical protein TPHA_0J00970 [Tetrapisispora phaffii CBS 4417]
Length = 875
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/778 (62%), Positives = 627/778 (80%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E V FDKITAR+ +L YGL ++H DPV V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVIKRDGRKEPVRFDKITARISRLCYGLDSDHVDPVKVTQRIISGVYEGVTTEELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAAR+A+SNLHK T K FS+ I+ +Y + N + A LI+DD+
Sbjct: 61 AETAAYMTTVHPDYAILAARLAISNLHKQTTKCFSDVIQQLYEYINPENNKPAKLISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE++MK+ L+S I++DRDF ++YFGFKTLERSYLLK+ KV ERPQHM+MRV++GIH
Sbjct: 121 YEVVMKHKDELNSAIVFDRDFQFNYFGFKTLERSYLLKMNNKVAERPQHMIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+S ++TY++MSQR+FTHASPTLFNAGTP PQ+SSCFLV MKDDS++GI++TLKECA+
Sbjct: 181 DDIESVLETYNLMSQRYFTHASPTLFNAGTPNPQMSSCFLVAMKDDSLDGIFDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ HNIRATGSYI GTNGTSNG++PMLRVFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHAHNIRATGSYIAGTNGTSNGLIPMLRVFNNTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIF+F++++KNHGKEE RARDLF ALWVPDLFM+RV+ NG W+LF P+EA GL+
Sbjct: 301 LEPWHDDIFDFVDIRKNHGKEEMRARDLFPALWVPDLFMKRVEENGDWTLFSPSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +GAEFE LY Y EG+ ++ ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DVYGAEFEALYNKYVAEGRGRRTIKAQKLWYSILEAQTETGTPFIVYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY++P ETAVCNLASIALP F+ DV S + +
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFI---DV-----------SEDGNTQTY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +V ++T NLN++ID NYYPVE A+ SN RHRPI +G+QGLADTF LL + FES
Sbjct: 467 NFQKLHDVAKVLTRNLNRVIDRNYYPVEEAKNSNFRHRPIALGIQGLADTFQLLRLPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A++LN IFET+Y+ AL++S E+A K+GPY +Y SPVSKG+LQ DMW V P+D WDW
Sbjct: 527 QKAKELNIHIFETLYHAALESSCELAQKDGPYPSYQGSPVSKGVLQYDMWGVDPTDLWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSLL+APMPTASTSQILG NECFEP+TSN+Y RR LSGEF +VN +L
Sbjct: 587 APLKANIKKHGIRNSLLLAPMPTASTSQILGYNECFEPFTSNMYQRRTLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ ++K +I +GS+ +P +P+ELK IYKTVWEI Q T+++ A DR +
Sbjct: 647 LRDLVDLGLWNDSMKQHLITANGSIADLPNVPQELKEIYKTVWEISQKTIIEFAADRSAF 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
IDQS SLNIH+ P F K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V ++
Sbjct: 707 IDQSHSLNIHIRAPTFGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDAKVAEQ 764
>gi|28422346|gb|AAH46846.1| RRM1 protein, partial [Xenopus laevis]
Length = 760
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/772 (65%), Positives = 625/772 (80%), Gaps = 19/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYSGVTTIELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAAR+AVSNLHK TKK FS+ ++D+YN+ N + +P+++ +
Sbjct: 61 AETAATLTTKHPDYAILAARVAVSNLHKETKKIFSDVMEDLYNYVNPLNSKHSPMVSRET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+CMKDDSIEGIY+TLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL+LKKN GKEE RARDLFYA+W+PDLFM+RV+ N WSL CP+E GL
Sbjct: 301 LEPWHYDVFDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLE 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG +FE+LY YEREG+ +KVV+AQ +W I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 EVWGDKFEELYEKYEREGRTRKVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSDKEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLA+VT ++ NLNKII++N+YPV A SN +HRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+AQ LNK IFETIYY AL++S E+A + GPYETY PVSKGILQ DMWNV P+D WDW
Sbjct: 522 EKAQMLNKQIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 TALKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DLTE G+W+ +KN+II ++GS+Q +P+IP +LK +YKTVWEI Q T++ MA DRG +
Sbjct: 642 MKDLTEQGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 753
>gi|393213404|gb|EJC98900.1| hypothetical protein FOMMEDRAFT_128598 [Fomitiporia mediterranea
MF3/22]
Length = 868
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/771 (65%), Positives = 617/771 (80%), Gaps = 20/771 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KR R+E V FDKITAR+ KL +GL +H DP+ +++KV AGVY+GVTT +LD LAA
Sbjct: 3 YVYKRGERKERVAFDKITARIGKLCFGLDPKHVDPIEITKKVVAGVYQGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIA+SNLHK TKK FS I D+YN+ N R+G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKKFSAVISDLYNYVNPRNGRPAGMISKETY 122
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
E + NA LDS I+Y+RDF Y YFGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 123 ETVRDNAELLDSAIVYERDFHYQYFGFKTLERSYLLKINGKIAERPQHMLMRVAVGIHGR 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI+ I++Y++MSQR+FTHASPTLFNAGTP PQLSSCFLV MK+DSI+GIY+TLK+CA+I
Sbjct: 183 DIERTIESYNLMSQRYFTHASPTLFNAGTPHPQLSSCFLVTMKEDSIDGIYDTLKQCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+RV+++ W LFCPNEA GL +
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVESDSDWPLFCPNEAPGLHE 362
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EFE L+ YE EG+AK+ V+AQ LW+ I+ +Q+ETG P+ML+KD+ NRKSNQQNLG
Sbjct: 363 VWGDEFEALFEKYENEGRAKRTVKAQKLWYAIIEAQVETGGPFMLYKDSANRKSNQQNLG 422
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEY+SP ETAVCNLASIALP F+ RGS +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASIALPSFI-----------------RGST---YD 462
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL +V +V NLN+IIDVNYYPV+ AR SN+RHRPIGIGVQGLADTF+ L + F+SP
Sbjct: 463 FQKLHDVAKVVAFNLNRIIDVNYYPVQEARNSNMRHRPIGIGVQGLADTFMALRLPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA++LN IFETIY+ AL++SS+IAA +GPY ++ SP +G LQ D+W V PSD WDW
Sbjct: 523 EARELNVKIFETIYHAALESSSDIAAVDGPYSSWKGSPAEQGKLQFDLWGVEPSDLWDWK 582
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLL++PMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VV LL
Sbjct: 583 SLKEKIAQTGLRNSLLLSPMPTASTSQILGFNECFEPYTSNIYTRRVLSGEFQVVCPWLL 642
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L E G+W ++N II +GSVQ IP IP+++K IYKTVWE+ Q ++DMA DRG +I
Sbjct: 643 RELVERGLWDEQMRNLIIAHNGSVQNIPSIPDDVKAIYKTVWELSQKKIIDMAADRGAFI 702
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
QSQSLNIH+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD
Sbjct: 703 CQSQSLNIHLQSPTNGQMTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVD 753
>gi|344303185|gb|EGW33459.1| hypothetical protein SPAPADRAFT_60812 [Spathaspora passalidarum
NRRL Y-27907]
Length = 845
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/775 (65%), Positives = 631/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL +H D V ++Q+V +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDPQHVDAVAITQRVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K +S+ K++Y + N ++GL +P+I+ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTIKQYSQVSKELYEYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II+KNA L+S I+YDRDF Y+YFGFKTLERSYLL++ GKV ERPQH+LMRV+IGIH
Sbjct: 121 YDIIVKNADELNSAIVYDRDFSYNYFGFKTLERSYLLRINGKVAERPQHLLMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI I++Y+MMSQ++FTH SPTLFNAGTP PQ+SSCFLV MK+DSI+GIY+TLK CA+
Sbjct: 181 DDIPRVIESYNMMSQKYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRATGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KN GKEE RARDLF ALW+PDLFM+RV+ NG+W+LF PNEA GL
Sbjct: 301 LEPWHADIFDFIDIRKNSGKEEIRARDLFPALWIPDLFMKRVEQNGEWTLFSPNEAPGLP 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YEREG+ K V+AQ LW+ IL +Q ETGTP+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEELYERYEREGRGVKTVKAQKLWYSILEAQTETGTPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P E AVCNLASIALP FV EKD E+H ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFV-EKD---ENH------------SWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL EVT +VT NLN++ID NYYPV AR SN+R+RP+ +GVQGLAD F+ L + F+S
Sbjct: 465 NFEKLHEVTKVVTRNLNRVIDRNYYPVPEARNSNMRNRPVALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A+++S E+A +EGPY TY SP SKG+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVESSVELAQEEGPYPTYEGSPASKGLLQFDLWERKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 585 DTLKQKIAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPFL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ +K+ II ++GS+Q +P +P+ELK +YKTVWEI Q ++DMA DR Y
Sbjct: 645 LRDLVDLGIWNEAMKSNIIANNGSIQSLPNVPDELKELYKTVWEISQKHIIDMAADRAAY 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ +P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 705 IDQSQSLNIHIKEPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKV 759
>gi|17555242|ref|NP_499039.1| Protein RNR-1 [Caenorhabditis elegans]
gi|417657|sp|Q03604.1|RIR1_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|3880121|emb|CAA79574.1| Protein RNR-1 [Caenorhabditis elegans]
Length = 788
Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/800 (63%), Positives = 630/800 (78%), Gaps = 22/800 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKRDGR+E VHFDKIT+R++KLSYGL+ + DPV V+ KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRKEDVHFDKITSRIQKLSYGLNMDFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA+MTT HP+YA LAARIAVSNLHK T K FSE +K ++ ++ +G AP+I+D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETW 127
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
II KNA L+S I+YDRD+ Y YFGFKTLERSYLLK+ ++VERPQ MLMRVSIGIH D
Sbjct: 128 AIIEKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEIVERPQQMLMRVSIGIHGD 187
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI SAI+TY++MS+R+ THASPTLFN+GT RPQ+SSCFL+ M +DSI GIY+TLK+CA+I
Sbjct: 188 DITSAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADIFEF++L+KN G EE RARDLF ALW+PDLFM+RV+ + +WSL CP E GL D
Sbjct: 308 EPWHADIFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQEWSLMCPCECPGLDD 367
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
CWG EFE LY YE EG+ +K V+A+ LW I+++QIETG PY+ +KD NRKSNQQNLG
Sbjct: 368 CWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEIIEY++P E AVCNLASIAL R+V + + FD
Sbjct: 428 TIKCSNLCTEIIEYSAPDEIAVCNLASIALNRYV-------------------TPEKKFD 468
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F KLAEVT ++T NLNKIIDVNYYPVE AR SN+RHRPIG+GVQGLAD F+L+ F S
Sbjct: 469 FVKLAEVTKVITRNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSA 528
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA+ LNK IFETIYY AL+ S E+A GPY TY SPVSKG LQ DMW V P+D+ DW
Sbjct: 529 EARDLNKRIFETIYYAALEASCELAELNGPYSTYEGSPVSKGQLQFDMWGVTPTDQCDWA 588
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+K+G+RNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSG+F +VN H+L
Sbjct: 589 TLRKKIAKHGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL E G+W+ +KN++I ++GS+Q I IP ++K +Y+TVWEI Q +++MA DRG YI
Sbjct: 649 KDLVERGLWTDEMKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQKDIIEMAADRGAYI 708
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK--EK 779
DQSQSLNIHM +P++ +TS+HF W +GLKTGMYYLR++ A +A++FTVD + K ++
Sbjct: 709 DQSQSLNIHMAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKNALKTNQQ 768
Query: 780 PEKPELVVDDETKMAQVVCS 799
E P V + + + ++CS
Sbjct: 769 AETPATVAESQDE-GCLMCS 787
>gi|126662514|ref|ZP_01733513.1| ribonucleoside diphosphate reductase, alpha subunit [Flavobacteria
bacterium BAL38]
gi|126625893|gb|EAZ96582.1| ribonucleoside diphosphate reductase, alpha subunit [Flavobacteria
bacterium BAL38]
Length = 810
Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/831 (61%), Positives = 639/831 (76%), Gaps = 41/831 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ + D V V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITDRIKKLCYGLN-DMVDAVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT +HPDYA LAARIA+SNLHKNT KSFSET+ +MY++ N R+ +APLI+D++
Sbjct: 60 AETAASMTVSHPDYAQLAARIAISNLHKNTNKSFSETMNEMYHYVNPRTNQEAPLISDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+I NA LDS IIY RDF+YDYFGFKTLERSYLL++ GK+VERPQHMLMRVS+GIH
Sbjct: 120 YEVIKANAEFLDSHIIYTRDFNYDYFGFKTLERSYLLRINGKIVERPQHMLMRVSVGIHM 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+++ I+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GIY+TLK+ A
Sbjct: 180 NDLEAVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+++HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLAIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LE WHADIFEFL+LKKN GKEE RARDLF+A+W DLFM+RV+ + W+L CPNE L
Sbjct: 300 LETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVEEDANWTLMCPNECPDLD 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFE LYT YE +GK +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 NVYGDEFEALYTSYEAKGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASI+LP FV +N F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEIAVCNLASISLPMFV--------------------ENGKF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ E L VT VT NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI++ + F S
Sbjct: 460 NHELLFTVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADAFIMMRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA+++N++IFET+Y+ A+ S E+A +EGPY T+ SP+SKG Q ++WN+ S R
Sbjct: 520 DEAKKVNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPISKGEFQHNLWNIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + NGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMANGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLLHDL + G+W+ T+K +I+ +GSVQ I IP +LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLHDLVDRGLWNETLKQEIMRHNGSVQHIDRIPADLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD----T 773
G +IDQSQSLN+ M N+ K+TS+HF W GLKTGMYYLR++AA DAIKFT++
Sbjct: 700 GYFIDQSQSLNLFMQDANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLNNDKVA 759
Query: 774 SVFKEKP-------------EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + KP E+P + +E + + E+C CGS
Sbjct: 760 APIEVKPQTEVKKVEAIAVLEEPSEMTAEEYRAMVEMARNAGPEDCEMCGS 810
>gi|349578887|dbj|GAA24051.1| K7_Rnr3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 869
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/775 (63%), Positives = 617/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+ A GL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPSAAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L + FES
Sbjct: 466 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 526 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|268573646|ref|XP_002641800.1| C. briggsae CBR-RNR-1 protein [Caenorhabditis briggsae]
Length = 790
Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/778 (64%), Positives = 623/778 (80%), Gaps = 19/778 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKRDGR E VHFDKIT+R++KLSYGL+ + DPV V+ KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRMENVHFDKITSRIQKLSYGLNMDFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA+MTT HP+YA LAARIAVSNLHK T K FSE +K ++ ++ +G AP+I+D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETW 127
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
EII KNA L+S I+YDRD+ Y YFGFKTLERSYLLK+ +VVERPQ MLMRV+IGIH
Sbjct: 128 EIIQKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEVVERPQQMLMRVAIGIHGK 187
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI +AI+TY++MS+R+ THASPTLFN+GT RPQ+SSCFL+ M +DSI GIY+TLK+CA+I
Sbjct: 188 DISAAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADIFEF+ L+KN G EE RARDLF ALWVPDLFM+RV+ + WSL CP E GL D
Sbjct: 308 EPWHADIFEFVALRKNTGPEEERARDLFLALWVPDLFMKRVEKDQDWSLMCPCECPGLDD 367
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
CWG EFE LY YE EG+ +K V+A+ LW I+++QIETG PY+ +KD NRKSNQQNLG
Sbjct: 368 CWGEEFETLYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEIIEY++P E AVCNLASIAL RFV + ++ FD
Sbjct: 428 TIKCSNLCTEIIEYSAPDEVAVCNLASIALNRFV-------------------TNDKKFD 468
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F KLAEVT ++T+NLNKIIDVNYYP+E AR SN+RHRPIG+GVQGLAD F+L+ F SP
Sbjct: 469 FVKLAEVTKVITKNLNKIIDVNYYPIEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSP 528
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
+A+ LNK IFETIYY AL+ S E+A ++GPY TY SPVSKG LQ DMW V P+++ +W
Sbjct: 529 QARDLNKRIFETIYYAALEASCELAERDGPYSTYEGSPVSKGQLQFDMWGVTPTNQCNWD 588
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSG+F +VN H+L
Sbjct: 589 ELRKKIAKHGVRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL E G+W+ +KN++I ++GS+Q IP IP+++K +Y TVWEI Q +++MA DRG +I
Sbjct: 649 KDLVERGLWTDEMKNRLIANNGSIQNIPGIPDDIKELYLTVWEISQKEIIEMAADRGAFI 708
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
DQSQSLNIHM +P++ +TS+HF W +GLKTGMYYLR++ A +A++FTVD + ++K
Sbjct: 709 DQSQSLNIHMAKPSYAAITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKAALQQK 766
>gi|447146|prf||1913428A ribonucleotide reductase:SUBUNIT=large
Length = 811
Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/834 (61%), Positives = 639/834 (76%), Gaps = 46/834 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGRQE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T+K FS ++ ++++ N ++ AP+I+D I
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+MK+ LDS IIYDRDF Y++FGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI++AI+TY++MSQR+FTHASPTLFNAGTPRPQLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AG + ++HNIRATGSYI GTNGTSNGIVPM+RV+N+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGVLVFNIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ +FL L+K HG E+ RAR +FYALW+PDLFM+RV+ N QW+ FCPNEA GLA
Sbjct: 301 LEPWHADVMDFLELRKTHGNEDFRARQMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EF LY YE+E + ++ + AQ +W+ IL SQ+ETG P+ML+KD+CNRKSNQ+N+
Sbjct: 361 DVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCNRKSNQKNV 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EY+SP E AVCNLAS+ALP F+++ +
Sbjct: 421 GTIRSSNLCTEIVEYSSPDEVAVCNLASVALPTFIKDGK--------------------Y 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +V +VT NLNKIIDVNYYPV ARRSN+RHRP+G+GVQGLAD F L + FES
Sbjct: 461 NFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A++LN IFETIY+ AL+ S EIA EG YE+Y SP +GILQ DMWNV P+D WDW
Sbjct: 521 AGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPCIQGILQYDMWNVNPTDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
++ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 AEFKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E +W+ +KNK++ DGS+Q IPEIP++LK +YKTVWEI Q T++D A DRG +
Sbjct: 641 LKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPF 700
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK- 779
IDQSQSLNIH+ P++ K+TS+HF W +GLKTGMYYLR+ AA+ AIKFTVD + +
Sbjct: 701 IDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARN 760
Query: 780 ----------------------PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
P K E+ + +E +A CS+ N E C C +
Sbjct: 761 EESNEENKKPVIKNGKAEISAEPTKEEIDIYNEKVLA---CSIKNPEACEMCSA 811
>gi|6320914|ref|NP_010993.1| ribonucleotide-diphosphate reductase subunit RNR1 [Saccharomyces
cerevisiae S288c]
gi|730514|sp|P21524.2|RIR1_YEAST RecName: Full=Ribonucleoside-diphosphate reductase large chain 1;
AltName: Full=Ribonucleotide reductase R1 subunit 1;
AltName: Full=Ribonucleotide reductase large subunit 1
gi|93278634|pdb|1ZYZ|A Chain A, Structures Of Yeast Ribonucloetide Reductase I
gi|93278635|pdb|1ZYZ|B Chain B, Structures Of Yeast Ribonucloetide Reductase I
gi|93278636|pdb|1ZZD|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279171|pdb|2CVS|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279172|pdb|2CVT|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279173|pdb|2CVU|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279174|pdb|2CVV|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279175|pdb|2CVW|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279176|pdb|2CVX|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279177|pdb|2CVY|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279277|pdb|2EUD|A Chain A, Structures Of Yeast Ribonucleotide Reductase I Complexed
With Ligands And Subunit Peptides
gi|197107210|pdb|2ZLF|A Chain A, The Structural Basis For Peptidomimetic Inhibition Of
Eukaryotic Ribonucleotide Reductase
gi|197107212|pdb|2ZLG|A Chain A, The Structual Basis For Peptidomimetic Inhibition Of
Eukaryotic Ribonucleotide Reductase
gi|290560304|pdb|3K8T|A Chain A, Structure Of Eukaryotic Rnr Large Subunit R1 Complexed
With Designed Adp Analog Compound
gi|323714514|pdb|3PAW|A Chain A, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|323714515|pdb|3PAW|B Chain B, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|323714516|pdb|3PAW|C Chain C, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|323714517|pdb|3PAW|D Chain D, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|383875418|pdb|3S87|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 With Dgtp
And Adp
gi|383875420|pdb|3S8B|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 With Amppnp
And Cdp
gi|414145322|pdb|3RSR|A Chain A, Crystal Structure Of 5-Nitp Inhibition Of Yeast
Ribonucleotide Reductase
gi|603306|gb|AAB64606.1| Rnr1p: Ribonucleotide reductase [Saccharomyces cerevisiae]
gi|256271462|gb|EEU06516.1| Rnr1p [Saccharomyces cerevisiae JAY291]
gi|285811701|tpg|DAA07729.1| TPA: ribonucleotide-diphosphate reductase subunit RNR1
[Saccharomyces cerevisiae S288c]
Length = 888
Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/781 (62%), Positives = 623/781 (79%), Gaps = 15/781 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G AP+I+DD+
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY++MS ++FTHASPTLFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ +++ S E+A K+GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+GVRNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 E 781
E
Sbjct: 766 E 766
>gi|401626001|gb|EJS43969.1| rnr1p [Saccharomyces arboricola H-6]
Length = 887
Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/781 (62%), Positives = 621/781 (79%), Gaps = 15/781 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHVDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I D+Y + N +G AP+I+DD+
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIDDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY++MS ++FTHASPTLFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALWVPDLFM+RV+ NG W+LF P A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWVPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLNK+ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 466 NFKKLHEIAKVVTRNLNKVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ + + S E+A K+GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNVQIFETIYHASTEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRSDVMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKVADQAT 765
Query: 781 E 781
E
Sbjct: 766 E 766
>gi|151944785|gb|EDN63044.1| ribonucleotide reductase, large (R1) subunit [Saccharomyces
cerevisiae YJM789]
gi|190405633|gb|EDV08900.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|259145984|emb|CAY79244.1| Rnr1p [Saccharomyces cerevisiae EC1118]
gi|323333854|gb|EGA75244.1| Rnr1p [Saccharomyces cerevisiae AWRI796]
gi|323348888|gb|EGA83125.1| Rnr1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355271|gb|EGA87096.1| Rnr1p [Saccharomyces cerevisiae VL3]
gi|392299768|gb|EIW10860.1| Rnr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 888
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/781 (62%), Positives = 623/781 (79%), Gaps = 15/781 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G AP+I+DD+
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY++MS ++FTHASPTLFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ +++ S E+A K+GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 E 781
E
Sbjct: 766 E 766
>gi|194388656|dbj|BAG60296.1| unnamed protein product [Homo sapiens]
Length = 762
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 622/777 (80%), Gaps = 19/777 (2%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP ++ KV G+Y GVTT +LD LAAETAA +TT HPDYA LAARIAVSNLHK TKK F
Sbjct: 5 DPAQITMKVIQGLYSGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVF 64
Query: 95 SETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERS 154
S+ ++D+YN+ N +G +P++A +I++ N L+S IIYDRDF Y+YFGFKTLERS
Sbjct: 65 SDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERS 124
Query: 155 YLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQ 214
YLLK+ GKV ERPQHMLMRVS+GIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQ
Sbjct: 125 YLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQ 184
Query: 215 LSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVP 274
LSSCFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VP
Sbjct: 185 LSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVP 244
Query: 275 MLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWV 334
MLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+
Sbjct: 245 MLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWI 304
Query: 335 PDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEIL 394
PDLFM+RV+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+
Sbjct: 305 PDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAII 364
Query: 395 TSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRF 454
SQ ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +
Sbjct: 365 ESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMY 424
Query: 455 VREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSN 514
V + +DF+KLAEVT +V NLNKIID+NYYPV A SN
Sbjct: 425 V-------------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSN 465
Query: 515 LRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYET 574
RHRPIGIGVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A ++GPYET
Sbjct: 466 KRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYET 525
Query: 575 YHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
Y SPVSKGILQ DMWNV P+D WDW VL++ I+K G+RNSLL+APMPTAST+QILGNNE
Sbjct: 526 YEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNE 585
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
EPYTSNIY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q IPEIP++
Sbjct: 586 SIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDD 645
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
LK +YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTG
Sbjct: 646 LKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTG 705
Query: 755 MYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
MYYLR+R AA+ I+FT++ K+K + + + E A +VCSL NR+EC+ CGS
Sbjct: 706 MYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 762
>gi|91080433|ref|XP_968671.1| PREDICTED: similar to AGAP010198-PA [Tribolium castaneum]
gi|270005754|gb|EFA02202.1| hypothetical protein TcasGA2_TC007859 [Tribolium castaneum]
Length = 808
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/819 (62%), Positives = 634/819 (77%), Gaps = 28/819 (3%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KRDGR+E VH DKIT+R++KL YGL+ E DPV ++ KV +G+Y GVTT +LD LAA
Sbjct: 9 YVCKRDGRKEEVHIDKITSRIQKLCYGLNMEFVDPVSITLKVISGLYPGVTTVELDTLAA 68
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA MTTNHPDYA LAARIAVSNLHK TKK FS+ I D++ + ++G K +I+D+ +
Sbjct: 69 ETAAMMTTNHPDYAILAARIAVSNLHKETKKQFSDVIDDLHKAVSSKTGRKTQMISDEHH 128
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
I+MKNA L+S IIYDRDF Y+YFGFKTLERSYLLK+ GK+VERPQHMLMRV++GIH
Sbjct: 129 AIVMKNADRLNSCIIYDRDFSYNYFGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHGS 188
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DIDSAI+TY+ MS+++FTHASPTLF+A TP+PQLSSCFLV + +D++EGI L +CA+I
Sbjct: 189 DIDSAIETYNYMSEKYFTHASPTLFSAATPKPQLSSCFLVTLPEDNLEGISRCLTQCAMI 248
Query: 242 SKSAGGIGVSVHNIRATGSYIR----GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
SK+AGG+GVS+HN+RA G+ R GT S+GIVP+LRVFN++ARYVDQGG KR GA
Sbjct: 249 SKTAGGLGVSIHNLRAKGTTFRTTLAGTPKVSDGIVPVLRVFNNSARYVDQGGNKRPGAC 308
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
A+YLEPWHADI +FLNLKKN GKE+ RARDLF+ALW PDLFM RV+ + +WSL CP+++
Sbjct: 309 AIYLEPWHADILDFLNLKKNTGKEQLRARDLFFALWTPDLFMRRVKNDEKWSLMCPHQSP 368
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GLADCWG EFEKLY YE +G+ + + A+++W I SQ+ETGTPYML+KD CNRKSNQ
Sbjct: 369 GLADCWGEEFEKLYEKYETDGRYVRQLPARDVWRAICVSQVETGTPYMLYKDACNRKSNQ 428
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
QNLGTI+SSNLCTEI+E+TSP E AVCNLASIA+ FV+ +
Sbjct: 429 QNLGTIRSSNLCTEIVEFTSPDEIAVCNLASIAVNMFVK------------------ADR 470
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
+DF KL E+T +V +NLNK+ID+NYYP+ AR+SNLRHRP+GIGVQGLAD FILL M
Sbjct: 471 SGYDFNKLKEITKVVAKNLNKVIDLNYYPLPEARKSNLRHRPVGIGVQGLADAFILLRMP 530
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR 597
F+SPEA+ LN+ IFET+YY AL+ S E+A K GPYETY SPVS+G+LQ DMW V P++
Sbjct: 531 FDSPEAKALNRQIFETLYYGALEASCELAEKYGPYETYEGSPVSQGVLQYDMWGVTPTNL 590
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L+ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF VVN
Sbjct: 591 WDWSDLKKKIAKYGVRNSLLLAPMPTASTAQILGNNESTEPYTSNIYVRRVLSGEFQVVN 650
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HLL DLTE G+W T+KN+II + GS+Q IP IP++LK +YKTVWEI Q ++DMA DR
Sbjct: 651 QHLLKDLTERGLWDDTMKNQIIANYGSIQNIPGIPDDLKQLYKTVWEISQKVIIDMAADR 710
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQS+NIH+ PN+ ++S+HF W +GLKTGMYYLR++ AA+ I+FTVD S
Sbjct: 711 GAFIDQSQSMNIHIAAPNYGVMSSMHFYGWDKGLKTGMYYLRTKPAANPIQFTVDKSKLI 770
Query: 778 EKPEKPELVVDDETKM-----AQVVCSLTNREECMACGS 811
K V ETK A +VCSL N E C C +
Sbjct: 771 TKTSTGVGKV-QETKTTPEEEAALVCSLRNPEACEMCSA 808
>gi|308501413|ref|XP_003112891.1| CRE-RNR-1 protein [Caenorhabditis remanei]
gi|308265192|gb|EFP09145.1| CRE-RNR-1 protein [Caenorhabditis remanei]
Length = 786
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/798 (63%), Positives = 629/798 (78%), Gaps = 20/798 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKRDGR E VHFDKIT+R++KLSYGL+ E DPV V+ KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRMEDVHFDKITSRIQKLSYGLNMEFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA+MTT HP+YA LAARIAVSNLHK T K FSE +K ++ ++ +G AP+I+D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETW 127
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
II KNA L+S I+YDRD+ Y YFGFKTLERSYLLK+ ++VERPQ MLMRVSIGIH +
Sbjct: 128 AIIEKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEIVERPQQMLMRVSIGIHGE 187
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI +AI+TY++MS+R+ THASPTLFN+GT RPQ+SSCFL+ M +DSI GIY+TLK+CA+I
Sbjct: 188 DIAAAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEF++L+KN G EE RARDLF ALW+PDLFM+RV+ + WSL CP E GL D
Sbjct: 308 EPWHADVFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQNWSLMCPCECPGLDD 367
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
CWG EFE LY YE EG+ +K V+A+ LW I+++QIETG PY+ +KD NRKSNQQNLG
Sbjct: 368 CWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEI+EY++P E AVCNLASIAL R+V + + FD
Sbjct: 428 TIKCSNLCTEIMEYSAPDEIAVCNLASIALNRYV-------------------TPEKKFD 468
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KLAEVT ++T+NLNKIIDVNYYPVE AR SN+RHRPIG+GVQGLAD F+L+ F S
Sbjct: 469 FKKLAEVTKVITKNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSK 528
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
+A+ LNK IFETIYY AL+ S E+A ++GPY TY SPVSKG LQ DMW V P+D+ DW
Sbjct: 529 QARDLNKRIFETIYYAALEASCELAERDGPYSTYEGSPVSKGQLQFDMWGVTPTDQCDWA 588
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+ +G+RNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSG+F +VN H+L
Sbjct: 589 ALRKKIATHGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL E G+W+ +KN++I ++GS+Q IPEIP ++K +Y TVWEI Q +++MA DRG +I
Sbjct: 649 KDLVERGLWTDEMKNRLIANNGSIQNIPEIPADIKELYLTVWEISQKEIIEMAADRGAFI 708
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
DQSQSLNIHM +P++ +TS+HF W +GLKTGMYYLR++ A +A++FTVD K K +
Sbjct: 709 DQSQSLNIHMAKPSYAAITSMHFYGWKQGLKTGMYYLRTKPAVNAVQFTVDKGALKAKVD 768
Query: 782 KPELVVDDETKMAQVVCS 799
P++ + ++CS
Sbjct: 769 -PKVAALQQQDEGCLMCS 785
>gi|298207003|ref|YP_003715182.1| ribonucleoside-diphosphate reductase large chain [Croceibacter
atlanticus HTCC2559]
gi|83849637|gb|EAP87505.1| probable ribonucleoside-diphosphate reductase large chain
[Croceibacter atlanticus HTCC2559]
Length = 840
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/804 (62%), Positives = 633/804 (78%), Gaps = 25/804 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E V FDKITAR+KKL YGL+ E DPV V+ +V G+Y GVTTS LD LA
Sbjct: 1 MDVLKRDGRREPVMFDKITARVKKLCYGLN-ELVDPVKVAMRVIEGLYDGVTTSDLDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT +HPDYA LAARI+VSNLHK+TKK+FSE + D+Y + N R+G KAPL++D++
Sbjct: 60 AETAASMTVSHPDYAKLAARISVSNLHKDTKKTFSEVMTDLYEYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I N LDS IIY+RD+ YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVS+GIH
Sbjct: 120 YKVIQDNKDRLDSTIIYNRDYGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+D+AI+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 DDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+V+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLQVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+PDLFM+RV+ +G W+L CPNE L
Sbjct: 300 IEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEEDGNWTLMCPNECPNLF 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ EF++LY YE E K +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 NVHSEEFDELYLKYESENKGRKTIKARVLWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP FV KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KNGAF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +T VT+NLNK+ID NYYPV+ A SN RHRP+G+G+QGLAD FI+L M F S
Sbjct: 460 DHKELFRITKRVTKNLNKVIDRNYYPVKEAENSNFRHRPVGLGIQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA+ LN++IFET+Y+ A+ S E+A +EGPY +Y SP+SKG Q ++W + S R
Sbjct: 520 DEAKTLNQEIFETLYFAAVTASMELAIEEGPYSSYEGSPISKGEFQYNLWGIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + +NGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAGLRQKVLENGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL +G+W+ +KN I+ +GS+Q I IP++LK +YKTV+E+ ++DM+ R
Sbjct: 640 KHLLEDLVNLGLWNNDLKNAIMRANGSIQNIDGIPQDLKELYKTVYELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR++AA DAIKFTV+ +
Sbjct: 700 GYFIDQSQSLNLFMENANYAKLTSMHFYAWKNGLKTGMYYLRTKAAVDAIKFTVEKAKKA 759
Query: 778 E-KPEKPELVVDDETKMAQVVCSL 800
E +P++ E+ + Q L
Sbjct: 760 EPQPQQQEVAAKAAETLQQAKTQL 783
>gi|294948956|ref|XP_002785979.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|294948958|ref|XP_002785980.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239900087|gb|EER17775.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239900088|gb|EER17776.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 792
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/820 (62%), Positives = 632/820 (77%), Gaps = 43/820 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KR+G++ V FDKIT R++ L+ GL+ ++ D ++QKV G+Y GVTT++LD LA
Sbjct: 3 MYVIKRNGQKADVQFDKITRRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A M+ HPD+++LAARIAVSNLHKNT + FS+T+ ++Y + R G APL+++++
Sbjct: 63 AETCAYMSQVHPDFSTLAARIAVSNLHKNTHEKFSDTVTELYQITDGR-GRHAPLVSEEV 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGI 178
Y I+M NA LD I Y+RDFDYDYFGFKTLERSYLLK +ERPQHM+MRV++GI
Sbjct: 122 YNIVMANAEKLDKAIDYERDFDYDYFGFKTLERSYLLKRPSDKSCIERPQHMIMRVAVGI 181
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
H DD+D+AI+TY +MS R FTHA+PTLFN+GTP PQ+SSCFL+ MK DSIEGIY+TLK+C
Sbjct: 182 HGDDVDAAIETYDLMSTRVFTHATPTLFNSGTPHPQMSSCFLLSMKGDSIEGIYDTLKQC 241
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGV++ IRAT SYIRGTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+FA
Sbjct: 242 AMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKRKGSFA 301
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
VYLEPWHAD+FEFL+LKKNHGKEE RARDLFYALW+PDLFM+RV +NG W+LFCPNEA G
Sbjct: 302 VYLEPWHADVFEFLDLKKNHGKEEQRARDLFYALWIPDLFMKRVMSNGDWTLFCPNEAPG 361
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L D +G EFE LY YE++G +K V+AQ+LWF+IL SQ ETG PYML+KD+ NRKSNQ+
Sbjct: 362 LQDTYGDEFEALYEKYEKDGIGRKTVKAQSLWFKILESQQETGIPYMLYKDSANRKSNQK 421
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
NLGTI+ SNLC EIIEYTSP E AVCNLASIAL FV + K R
Sbjct: 422 NLGTIRCSNLCCEIIEYTSPDEVAVCNLASIALNMFVDK------------------KTR 463
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
+DF++L VT +VT NLNK+ID NYYPV ARRSN+RHRPIGIGVQGLAD F+L+ +
Sbjct: 464 TYDFDRLHRVTKVVTRNLNKVIDRNYYPVPEARRSNMRHRPIGIGVQGLADAFLLMRFPY 523
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDR 597
ESPEA +LN +IFETIY+ A + S E+A K+GPYET+ SP S+GILQ DMW+V P S R
Sbjct: 524 ESPEALKLNNEIFETIYHAACEASMELAKKDGPYETFEGSPASEGILQFDMWDVTPDSGR 583
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ I KNG+RNSLL+APMPTAST+QILGNNE FEPYT NIY RRVL+GEFV VN
Sbjct: 584 WDWNSLKEEIKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVN 643
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HL+ DL E+G+W+ IK+KII GSVQ + EIP+E++ +YKTVWEIKQ ++DMA R
Sbjct: 644 RHLVDDLMELGLWNDEIKDKIIRQKGSVQGVEEIPKEVQELYKTVWEIKQKKILDMAAGR 703
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF- 776
G YIDQSQSLNIHM K++S+HF W GLKTG YYLR++AAADAI+FT+D
Sbjct: 704 GPYIDQSQSLNIHMTNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAADAIQFTLDAKKIT 763
Query: 777 -------KEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P KP+ V +DE E C+AC
Sbjct: 764 MESPLKPRTSPLKPQYVQEDE-------------ETCIAC 790
>gi|349577734|dbj|GAA22902.1| K7_Rnr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 888
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/781 (62%), Positives = 623/781 (79%), Gaps = 15/781 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G AP+I+DD+
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY++MS ++FTHASPTLFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ +++ S E+A K+GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 E 781
E
Sbjct: 766 E 766
>gi|50557402|ref|XP_506109.1| YALI0F31735p [Yarrowia lipolytica]
gi|49651979|emb|CAG78922.1| YALI0F31735p [Yarrowia lipolytica CLIB122]
Length = 892
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/777 (63%), Positives = 618/777 (79%), Gaps = 16/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V+KRDGR+E+V DKITAR+K+L YGL +H DP+ ++ K+ +G+Y+GV+T +LD LA
Sbjct: 4 LFVIKRDGRKESVQVDKITARIKRLCYGLDPDHVDPIQITLKIASGIYEGVSTIELDNLA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKK FS+ + D+Y++ N R+ +P+++ ++
Sbjct: 64 AETAAYMTTLHPDYAILAARIAVSNLHKQTKKQFSQVVYDLYHYVNPRNKKHSPMVSKEL 123
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ + NA L+ I+YDRDF Y+YFGFKTLER+YLL+V G V ERPQ M+MRVS+GIH
Sbjct: 124 YDTVQANADELNGAILYDRDFTYNYFGFKTLERAYLLRVNGAVAERPQQMIMRVSVGIHG 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+I AI+TY+ MSQ++FTHASPTL+NAGTP+PQ+SSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 184 DNIARAIETYNYMSQKYFTHASPTLYNAGTPQPQMSSCFLVNMKDDSIDGIYDTLKTCAL 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 244 ISKSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAFAMY 303
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEF L+KNHGKEE RARDLF ALW+PDLFMERV+ N +W+L CPNE GL
Sbjct: 304 LEPWHDDIFEFCELRKNHGKEEIRARDLFLALWIPDLFMERVEQNAEWTLMCPNECPGLD 363
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF++LY YE+EG+ ++ + AQ LW+ IL Q E+G P+ML+KD+CNRKSNQ+NL
Sbjct: 364 DVYGDEFKQLYEQYEKEGRGRRTIPAQKLWYHILDCQTESGNPFMLYKDSCNRKSNQKNL 423
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP E AVCNLASIALP FV +R N F+
Sbjct: 424 GTIKSSNLCCEIVEYSSPDEVAVCNLASIALPTFV----------------TRDDTNSFY 467
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL ++ ++ NLN IID NYYPV A++SN+RHRPI +GVQGLADTF+ L + FES
Sbjct: 468 DFKKLHDIAKVIVRNLNAIIDRNYYPVPEAKKSNMRHRPIALGVQGLADTFMALRLPFES 527
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A ++G YET+ SP SKG LQ D+WNV PS+ W+W
Sbjct: 528 EEAKKLNIQIFETIYHGAVEASYEMALEDGAYETFQGSPASKGDLQFDLWNVTPSELWEW 587
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 588 DDLKAKIMKTGMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 647
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E+G+W+ T+KN+I+ D+GSVQ IP IP+E+K +YKTVWEI Q +++MA DR +
Sbjct: 648 LKDLVEVGLWNETMKNRIVADNGSVQNIPNIPQEIKDLYKTVWEISQKRIIEMAADRSPF 707
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR+ AAA I+FT+D K
Sbjct: 708 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTMAAAAPIQFTIDQEALK 764
>gi|323305248|gb|EGA58995.1| Rnr1p [Saccharomyces cerevisiae FostersB]
Length = 888
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/781 (62%), Positives = 622/781 (79%), Gaps = 15/781 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G AP+I+DD+
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY++MS ++FTHASPTLFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 XDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY +++ S E+A K+GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYXASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 E 781
E
Sbjct: 766 E 766
>gi|399925485|ref|ZP_10782843.1| Ribonucleoside-diphosphate reductase, alpha subunit [Myroides
injenensis M09-0166]
Length = 794
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/815 (62%), Positives = 637/815 (78%), Gaps = 25/815 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR+E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGRREPVMFDKITDRIRILCYELN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT +HPDYA LAARIAVSNLHKNTKK FSE + D+YN+ N R+ +APLIADD+
Sbjct: 60 AETAASMTVSHPDYALLAARIAVSNLHKNTKKVFSEVVDDLYNYINPRTNQEAPLIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I NA LDS IIY RDF+YDYFGFKTLERSYLLK+ G++VERPQHMLMRV++GIH
Sbjct: 120 YKVIKDNAERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGQIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDS I+TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 180 DDIDSVIETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAN 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEF+ L+KNHGKEE RARDLF ALW+ DLFM+RV+ + +W+L CPNE GL
Sbjct: 300 LEPWHADIFEFIELRKNHGKEEMRARDLFLALWLNDLFMKRVEADDKWTLMCPNECPGLC 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEKLY YE GK ++ ++A+ LW IL +QIETGTPYML+KD N KSNQ+NL
Sbjct: 360 DVYGDEFEKLYISYENAGKGRRTIKARELWEAILEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G I+SSNLCTEI+EYTSP E AVCNLASI+LP F+ +N F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFI--------------------ENGEF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ + L +VT +T NLN++ID NYYPVE AR SN++HRP+G+GVQGLAD FI+L + F +
Sbjct: 460 NHQFLYDVTKRITRNLNRVIDRNYYPVEEARNSNMKHRPVGLGVQGLADAFIMLRLPFTN 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
A++LNKDIFETIY+ A+ S E+A +EGPY T+ SP+SKG Q ++W + S R
Sbjct: 520 DAAKKLNKDIFETIYFAAVTASMELAIEEGPYSTFEGSPISKGEFQFNLWGINDDELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF++VN
Sbjct: 580 WDWNELRRKVIEHGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIIVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL E+G+W+ +K +I+ +GS+Q I IP +++ +YKTVWE+ ++DMA +R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDYIPADIRELYKTVWELSMKDIIDMAKER 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ N+ K+TS+HF W GLKTGMYYLR+++A DAIKFT+D
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLDNQKKI 759
Query: 778 EKPEKPELVVDD-ETKMAQVVCSLTNREECMACGS 811
+ E+ D+ T + + + N ++C CGS
Sbjct: 760 QNVIVEEINQDEYRTMIEKSRLASENDDDCEMCGS 794
>gi|379729067|ref|YP_005321263.1| ribonucleoside-diphosphate reductase subunit alpha [Saprospira
grandis str. Lewin]
gi|378574678|gb|AFC23679.1| ribonucleoside-diphosphate reductase, alpha subunit [Saprospira
grandis str. Lewin]
Length = 803
Score = 1075 bits (2781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/823 (60%), Positives = 635/823 (77%), Gaps = 32/823 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+GR+E V FDKI R+ L GL + D + +S+KV G+Y GV+T LD+LA
Sbjct: 1 MQVTKRNGRKEDVSFDKIMRRIYYLCDGLDNRYIDVIEISKKVILGLYDGVSTEVLDKLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+M T HPDYA LAARI+VS+LHK + SF+ET++ ++ + + ++G A +IADD
Sbjct: 61 AETAASMATEHPDYAILAARISVSDLHKGSSNSFTETMRRLHQYIDPKTGENAQMIADDF 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++ K++ LD+ I+++RD+DYD+FGFKTLERSYL+KV GK++ERPQ+M+MR ++GIH
Sbjct: 121 MALVEKHSEQLDAAIVHERDYDYDFFGFKTLERSYLMKVNGKIIERPQYMIMRTALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++I++A++TY +MS+RWFTHA+PTLFN+GTPRPQLSSCFL+ M DDSI GI+ETL CA
Sbjct: 181 ENIEAALQTYKLMSERWFTHATPTLFNSGTPRPQLSSCFLLSMTDDSIPGIFETLSRCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYI+GT G SNGIVPMLRV+NDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRAKGSYIKGTGGNSNGIVPMLRVYNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+LKKNHGKEE RARDLFYALW+PDLFM+RV+ + +W+L CPNE GL
Sbjct: 301 LEPWHADVFEFLDLKKNHGKEEQRARDLFYALWIPDLFMQRVEQDAEWTLMCPNECPGLY 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEK Y +E EGK ++ ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 361 DSYGEEFEKRYLAFEAEGKGRQTIKARELWMKILESQIETGTPYMLYKDHANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G I+SSNLCTEI+EY+SP E AVCNLASIAL +FV E +
Sbjct: 421 GVIRSSNLCTEIMEYSSPDEVAVCNLASIALSKFVTEDGQ-------------------Y 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF++L EVT IVT NLNK+ID+NYYP++ A+ SN+RHRP+GIGVQGLAD F+++ + FES
Sbjct: 462 DFQRLYEVTRIVTRNLNKVIDINYYPIQEAKNSNMRHRPVGIGVQGLADAFLMMRLPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A+QLN+DIFETIY+ A+ S ++A +EGPY TY SP+S+G Q D+W+V PSDRWDW
Sbjct: 522 EAARQLNRDIFETIYFAAMSESCQMAKEEGPYSTYEGSPISQGKFQFDLWDVTPSDRWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR LSGE+VVVNKHL
Sbjct: 582 EALRQEILAHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRTLSGEYVVVNKHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E G W+ +K +I +GSVQ I +P+E+K +YKT +EIKQ ++DM+ DRG +
Sbjct: 642 LKDLIERGYWTQELKEMLIAANGSVQNIEGLPQEIKELYKTAYEIKQRAIIDMSADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK- 779
I QSQSLN+ ++ PNF K+TS+HF W RGLKTGMYYLRS+AA D IKFT+ ++ +++K
Sbjct: 702 ICQSQSLNLFVESPNFAKLTSMHFHAWKRGLKTGMYYLRSKAAVDPIKFTL-SAKYQQKF 760
Query: 780 -----------PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ +++ V CS+ N ++C+ CGS
Sbjct: 761 VGQNGGSNQALAGRTAAQIEEANSQEGVACSIDNPDDCLMCGS 803
>gi|403218291|emb|CCK72782.1| hypothetical protein KNAG_0L01620 [Kazachstania naganishii CBS
8797]
Length = 904
Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/775 (62%), Positives = 623/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ +L YGL + D V V+Q++ +GVY+GVTTS+LD LA
Sbjct: 1 MYVIKRDGRKEPVKFDKITARISRLCYGLDPQRIDAVKVTQRIISGVYEGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAAR+A+SNLHK T K FS+ + D++++ N +G AP+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARVAISNLHKQTTKQFSQVVADLHDYINPATGKHAPMISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++I+MKN ++S I+YDRDF ++YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 FDIVMKNKDAINSAIVYDRDFQFNYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D++S +TY++MS R+F HASPTLFNAGTP+PQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 181 NDLESVFETYNLMSLRYFLHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEANEDWTLFSPSSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LYT YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CN+KSNQ+NL
Sbjct: 361 DIYGDEFEALYTKYEREGRG-KTIKAQKLWYSILEAQTETGTPFMIYKDACNQKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+ P ETAVCNLAS+ALP F+ S + +
Sbjct: 420 GTIKSSNLCCEIVEYSDPNETAVCNLASVALPAFIET--------------SEDGTSSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ ++T NLNK+ID NYYPV ARRSN+RHRPI +GVQGLADTF+LL + FES
Sbjct: 466 NFKKLHEIAKVITRNLNKVIDRNYYPVPEARRSNMRHRPIALGVQGLADTFMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN+ IFETIY+ +L+ S E+A K+G YET+ SP ++G+LQ DMWN P WDW
Sbjct: 526 PEARLLNEQIFETIYHASLEASCELAQKDGTYETFKTSPSAQGVLQMDMWNAKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LRD I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y RRVLSGEF VVN +L
Sbjct: 586 DTLRDDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYQRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ ++K +I +GS+Q +P IP+ELK +YKTVWEI Q +++MA DR Y
Sbjct: 646 LRDLVDLGIWNESMKQHLITANGSIQSLPNIPQELKDLYKTVWEISQKQIINMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS S+N+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D +V
Sbjct: 706 IDQSHSMNLFLQAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQNV 760
>gi|383875419|pdb|3S8A|A Chain A, Structure Of Yeast Ribonucleotide Reductase R293a With
Dgtp
gi|383875421|pdb|3S8C|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 R293a With
Amppnp And Cdp
Length = 888
Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/781 (62%), Positives = 622/781 (79%), Gaps = 15/781 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G AP+I+DD+
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY++MS ++FTHASPTLFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG K GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKAPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ +++ S E+A K+GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+GVRNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 E 781
E
Sbjct: 766 E 766
>gi|383280241|pdb|3TB9|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 Q288a With
Amppnp And Cdp
gi|383280242|pdb|3TBA|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 Q288a With
Dgtp And Adp
Length = 888
Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/781 (62%), Positives = 622/781 (79%), Gaps = 15/781 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G AP+I+DD+
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY++MS ++FTHASPTLFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVD GG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDAGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ +++ S E+A K+GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+GVRNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 E 781
E
Sbjct: 766 E 766
>gi|195146786|ref|XP_002014365.1| GL19156 [Drosophila persimilis]
gi|194106318|gb|EDW28361.1| GL19156 [Drosophila persimilis]
Length = 821
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/829 (60%), Positives = 638/829 (76%), Gaps = 37/829 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++VVKRDGRQE VHFDKIT+R++KL Y L+ + DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LFVVKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVSITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A +T NH DYA LAARIAVSNLHK TKK FS+ +D++ + N + +P++++
Sbjct: 72 AEISAGLTCNHADYAILAARIAVSNLHKETKKVFSDVFEDLFKNINRETNTASPMVSEFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ NA L+S IIYDRDF Y+YFGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 132 YNIVKNNADRLNSAIIYDRDFGYNYFGFKTLERSYLLKINGKIAERPQHMLMRVALGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDID+A++TY+++S+R+FTHASPTLF A T RPQLSSCFL+ M DSIEGI++++++CA+
Sbjct: 192 DDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMNSDSIEGIFKSVEQCAL 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+D+FEFL+LK+N GKEE+RARDLFYALW+PDLFM+RV+ N WSL CP++ GL
Sbjct: 312 LEPWHSDVFEFLDLKRNTGKEENRARDLFYALWIPDLFMKRVEANESWSLMCPHKCPGLQ 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG +FE+LY YE+EG+A + V+AQ LWF I+ SQ+ETG PYMLFKD+CNRKSNQQN+
Sbjct: 372 DVWGEKFEELYVKYEQEGRANRTVEAQALWFAIIESQVETGNPYMLFKDSCNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY++P E AVCNLASIAL FV + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEVAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT V +NLNKIID+NYYP+ A++SNLRHRPIGIGVQGLAD IL+ +ES
Sbjct: 473 DFKKLKEVTKTVAKNLNKIIDINYYPLPEAKKSNLRHRPIGIGVQGLADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ IFETIY+ AL+ S E+A + G YETY SPVSKGILQ DMW+ P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYFGALEASCELAEEFGVYETYEGSPVSKGILQYDMWDKTPTNLWDW 592
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+G+RNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QSLKEDIKKHGIRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KNKII GS+Q I IP++++ +YKTVWEI + + MA DRG +
Sbjct: 653 LRDLTELDLWDDEMKNKIISSRGSIQDIETIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-------- 772
IDQSQS N+H+ +PN+ K+TS+HF +W GLKTGMYYLR++ AA+AI+FTVD
Sbjct: 713 IDQSQSFNVHVAEPNYGKLTSIHFFSWKAGLKTGMYYLRTKPAANAIQFTVDKKQAASAL 772
Query: 773 ---------TSVFKEKPEKPELVVDD-ETKMAQVVCSLTNREECMACGS 811
+++ E + D E MA++VCSL N++ C++CGS
Sbjct: 773 NDLNGSFNKSTLLDESTNNSHHIESDRERHMAEMVCSLENKDACLSCGS 821
>gi|126131606|ref|XP_001382328.1| Ribonucleoside-diphosphate reductase large chain 1 [Scheffersomyces
stipitis CBS 6054]
gi|126094153|gb|ABN64299.1| Ribonucleoside-diphosphate reductase large chain 1 [Scheffersomyces
stipitis CBS 6054]
Length = 861
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/777 (64%), Positives = 629/777 (80%), Gaps = 16/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL H D V ++Q+V +GVY GVTT +LD LA
Sbjct: 1 MYVNKRDGRKEPVRFDKITARVQRLCYGLDPNHVDAVAITQRVISGVYHGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K +S K++Y++ N ++GL +P+I+ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQYSSVSKELYDYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II+K+ L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV+IGIH
Sbjct: 121 YDIILKHTDELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ I++Y++MSQR FTH SPTLFNAGTP PQ+SSCFLV MKDDSI+GIY+TLK CA+
Sbjct: 181 DDIEKVIESYNLMSQRLFTHGSPTLFNAGTPSPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF PNEA GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNADWTLFSPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YERE + + ++AQ LW+ IL +Q ETGTP+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEELYERYERENRGRSTIKAQKLWYSILEAQTETGTPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP E AVCNLASIALP FV + D + ++
Sbjct: 421 GMIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFVEKDDSSL----------------WY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL EVT +VT+NLNKIID NYYPV ARRSN+R+RPI +GVQGLADTF+ L + F+S
Sbjct: 465 NFEKLHEVTKVVTKNLNKIIDRNYYPVPEARRSNMRNRPIALGVQGLADTFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A++LN IFETIY+ A+++S E+A EGPYE+Y SP SKG+LQ D+W+ P++ WDW
Sbjct: 525 QQARELNIQIFETIYHAAVESSIELAQIEGPYESYEGSPASKGLLQYDLWDRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ +SK+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQNLSKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ +KN II ++GSVQ + +P+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LRDLVDLGIWNDAMKNNIIANNGSVQGLANVPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ P K+TS+HF W RGLKTGMYYLR++AAA AI+FTVD + K
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKRGLKTGMYYLRTQAAAAAIQFTVDKNSAK 761
>gi|259147192|emb|CAY80445.1| Rnr3p [Saccharomyces cerevisiae EC1118]
Length = 885
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 616/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGSWTLFSPSAAPGLD 376
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CNRK+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L + FES
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 542 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|344234166|gb|EGV66036.1| ribonucleoside-diphosphate reductase large chain 1 [Candida tenuis
ATCC 10573]
Length = 863
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/772 (62%), Positives = 625/772 (80%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KR G +E V FDKITAR+++L YGL T+H D V ++Q+V +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRGGHKEPVRFDKITARVQRLCYGLDTKHVDAVAITQRVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K +S+ K++Y++ N ++G +P+I+D+
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQYSQVSKELYDYINPKTGKHSPMISDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +I K+A L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YAVIQKHADELNSAIVYDRDFNYNYFGFKTLERSYLLRIDGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ I+TY+ MSQR+FTH SPTLFNAGTP PQ+SSCFLV MK+DSI+GIY+TLK CA+
Sbjct: 181 DDIERVIETYNYMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFMERV+ NG W+LF PNEA GLA
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMERVEANGDWTLFSPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EF++LY YERE + ++ ++AQ LW+ +L +Q ETGTP+ML+KD CN K+NQ+NL
Sbjct: 361 EVYGDEFKQLYEKYERENRGRQTIKAQKLWYAVLEAQTETGTPFMLYKDACNLKTNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+ P E +VCNLASIALP FV + ++
Sbjct: 421 GTIKSSNLCCEIVEYSDPEEVSVCNLASIALPSFVETDETSA----------------WY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL +++ +VT NLN+IID NYYPV A+RSN+R+RPI +GVQGLAD F+ L + F+S
Sbjct: 465 NFEKLHDISKVVTRNLNRIIDRNYYPVPEAKRSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+AA EG YE+Y SP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHGAVEASIELAATEGAYESYPGSPASQGLLQYDLWNRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNMYSRRVLSGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ ++KN II ++GS+Q + IP+++K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LKDLVDLGLWNESMKNNIISNNGSIQGLTNIPDQIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AAA AI+FT+D
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTID 756
>gi|557803|emb|CAA86157.1| rir3 [Saccharomyces cerevisiae]
gi|323304492|gb|EGA58258.1| Rnr3p [Saccharomyces cerevisiae FostersB]
gi|392298850|gb|EIW09946.1| Rnr3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 885
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 616/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 376
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CNRK+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L + FES
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 542 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|366993995|ref|XP_003676762.1| hypothetical protein NCAS_0E03350 [Naumovozyma castellii CBS 4309]
gi|342302629|emb|CCC70405.1| hypothetical protein NCAS_0E03350 [Naumovozyma castellii CBS 4309]
Length = 908
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/775 (63%), Positives = 616/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ +L YGL D V V+Q++ +GVY+GVTTS+LD LA
Sbjct: 1 MYVIKRDGRKEPVKFDKITARISRLCYGLDPNRIDAVKVTQRIISGVYEGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA LAAR+A+SNLHK T K FS I+ ++++ N +G APLI+DD+
Sbjct: 61 AETCAYMTTVHPDYAVLAARLAISNLHKQTTKQFSTVIQQLHDYINPATGKHAPLISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M+N ++S I+YDRDF ++YFGFKTLERSYLL++ GKV ERPQH++MRVS+GIH
Sbjct: 121 YDIVMENKDEINSAIVYDRDFQFNYFGFKTLERSYLLRLNGKVAERPQHLIMRVSLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+ +A++TY++MS R+F HASPTLFNAGTP+PQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 181 RDLKAAMETYNLMSLRYFIHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HN+R+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNVRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F+ ++KNHGKEE RARDLF ALWVPDLFM+RVQ NGQW+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWVPDLFMKRVQENGQWTLFSPSSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YEREG+ K ++AQ LW+ IL +Q ETGTP++++KD CN KSNQ+NL
Sbjct: 361 DCYGEEFEALYTRYEREGRG-KTIKAQKLWYSILEAQTETGTPFIIYKDACNEKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ ++T NLNK+ID NYYPV AR SN+RHRPI +GVQGLADT++LL + FES
Sbjct: 466 NFKKLHEIAKVITRNLNKVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ +L+ S E+A K+GPY+++ SP SKGILQ DMW+ P WDW
Sbjct: 526 EEAKLLNIQIFETIYHASLEASCELAQKDGPYQSFEGSPSSKGILQMDMWDKKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K G RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKYGTRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K II ++GS+Q +P +P+ELK +YKT+WEI Q T++DMA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQHIITENGSIQNLPNVPDELKALYKTIWEISQKTIIDMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 760
>gi|398364373|ref|NP_012198.3| ribonucleotide-diphosphate reductase subunit RNR3 [Saccharomyces
cerevisiae S288c]
gi|730516|sp|P21672.4|RIR3_YEAST RecName: Full=Ribonucleoside-diphosphate reductase large chain 2;
AltName: Full=Ribonucleotide reductase DNA
damage-inducible regulatory subunit 2; AltName:
Full=Ribonucleotide reductase R1 subunit 2; AltName:
Full=Ribonucleotide reductase large subunit 2
gi|151943097|gb|EDN61432.1| ribonucleotide reductase, large (R1) subunit [Saccharomyces
cerevisiae YJM789]
gi|285812585|tpg|DAA08484.1| TPA: ribonucleotide-diphosphate reductase subunit RNR3
[Saccharomyces cerevisiae S288c]
Length = 869
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 616/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L + FES
Sbjct: 466 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 526 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|354546793|emb|CCE43525.1| hypothetical protein CPAR2_211690 [Candida parapsilosis]
Length = 866
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/775 (64%), Positives = 631/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL + H +PV ++QKV AGVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEPVRFDKITARVQRLCYGLDSNHVEPVAITQKVIAGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K +S+ KD+Y + N + L AP+I+ +
Sbjct: 61 AETAATMTTIHPDYAVLAARIAVSNLHKQTIKLYSQVSKDLYEYINPETNLHAPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II +NA L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV+IGIH
Sbjct: 121 YDIIQENADELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI I+TY++MSQR+FTH SP LFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 RDIPRVIETYNLMSQRYFTHGSPCLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F+ ++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA LA
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPNLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF +LY YE+EG+ +K ++AQ LW+ IL +Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DTYGDEFVELYEKYEKEGRGRKTIKAQKLWYSILEAQTETGTPFMLYKDACNTKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P E AVCNLASIALP F+ E+D K+ ++
Sbjct: 421 GVIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFI-EQD---------------GKHAWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +VT +VT NLN++ID NYYPV A RSN+RHRPI +GVQGLAD F++L + F+S
Sbjct: 465 NFDKLHDVTKVVTRNLNRVIDRNYYPVPEAERSNMRHRPIALGVQGLADAFMVLRIGFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+AA+EGPYETY SP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAAEEGPYETYQGSPASQGLLQYDLWNRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DELKEKLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ +K+ II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LKDLVDLGIWNDAMKSSIISNNGSIQALPNIPDEIKALYKTVWEISQKHIIDMASDRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D ++
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKAI 759
>gi|381187135|ref|ZP_09894700.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Flavobacterium frigoris PS1]
gi|379650745|gb|EIA09315.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Flavobacterium frigoris PS1]
Length = 808
Score = 1072 bits (2773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/830 (60%), Positives = 642/830 (77%), Gaps = 41/830 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITDRIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA LAARIA+SNLH NT KSFSET+ +MY++ N R+G APL+++++
Sbjct: 60 AETAASMTIAHPDYAQLAARIAISNLHSNTTKSFSETMNEMYHYVNPRNGQDAPLLSEEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++I +NA LDS IIY+RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVS+GIH
Sbjct: 120 HKVIQENAEFLDSHIIYNRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++S ++TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 DDLESVLETYDLMSKKFFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGG+G+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGVGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+E WHADIF+FL+LKKN GKEE RARDLF+A+W DLFM+RVQ +G W+L CPNE GL
Sbjct: 300 IETWHADIFDFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDGNWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEK+YT YE+ GK +K ++A LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DVYGEEFEKMYTDYEKAGKGRKTIKAHELWEKILESQIETGTPYMLYKDAVNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLAS++LP FV N F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASLSLPMFV--------------------DNGKF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D E L VT VT NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L + F S
Sbjct: 460 DHESLYTVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
A++LN++IFET+Y+ A+ S E+A +EGPY ++ SP+S+G Q ++W + S R
Sbjct: 520 DAAKKLNQEIFETLYFAAVTASMEMAKEEGPYSSFKGSPMSQGEFQYNLWGMKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLLHDL E+G+W+ T+K +++ ++GSVQ + +IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLHDLVELGLWNETMKQELMRNNGSVQDL-DIPQDLKELYKTVWEMSMKDIIDMSRQR 698
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS--- 774
G ++DQSQSLN+ M N+ K+TS+HF W GLKTGMYYLR++AA DAIKFT++
Sbjct: 699 GYFVDQSQSLNLFMQNANYSKLTSMHFYAWQSGLKTGMYYLRTKAAVDAIKFTLNNDKKA 758
Query: 775 ---VFKEKP----------EKPELVVDDETKMAQVVCSLTNREECMACGS 811
V KP +P + +E + + ++C CGS
Sbjct: 759 EPIVVTSKPAAIAVEAIEAVEPVAINAEEYRAMLELAKNAGPDDCEMCGS 808
>gi|323337188|gb|EGA78442.1| Rnr3p [Saccharomyces cerevisiae Vin13]
Length = 885
Score = 1072 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 615/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 376
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CNRK+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L + FES
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
AQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 542 EXAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|254580061|ref|XP_002496016.1| ZYRO0C08514p [Zygosaccharomyces rouxii]
gi|238938907|emb|CAR27083.1| ZYRO0C08514p [Zygosaccharomyces rouxii]
Length = 921
Score = 1072 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/775 (63%), Positives = 619/775 (79%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ KL YGL H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKEPVRFDKITARISKLCYGLDPSHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIAVSNLHK T K FS+ I D+Y++ N +G+ +P+I+D+I
Sbjct: 61 AETCAYMTTVHPDYATLAARIAVSNLHKQTTKQFSQVISDLYHYVNPANGVHSPMISDEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ I+M N L+S I+YDRDF ++YFGFKTLERSYLL++ G ERPQH++MRVS+GIH
Sbjct: 121 FNIVMTNKDELNSAIVYDRDFQFNYFGFKTLERSYLLRINGLTAERPQHLIMRVSLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI SAI+TY++MS R+F HASPTLFNAGTP PQ++SCFLV MKDDSIEGIY++LKECA+
Sbjct: 181 EDIKSAIETYNLMSLRYFIHASPTLFNAGTPHPQMASCFLVAMKDDSIEGIYDSLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ N +W+LF P+EA GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEKNEEWTLFSPSEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEKLY YE+EG+ +K ++AQ LW+ IL +Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DVYGEEFEKLYERYEQEGRGRKTIRAQKLWYAILEAQTETGTPFMLYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+ ETA CNLASIALP V V + G K +++
Sbjct: 421 GVIKSSNLCCEIVEYSDKDETAACNLASIALPSCVE-------------VSADG-KEQWY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
F KL EV +T NLNK+ID NYYPV A+RSN+RHRPI +GV GLADTF++L + FES
Sbjct: 467 SFAKLHEVAKAITRNLNKVIDRNYYPVPEAKRSNMRHRPIALGVNGLADTFMMLRLPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA+ LN+ IFETIY+ AL+ S E+A G Y TY SP+S+G+LQ D+W PS+ WDW
Sbjct: 527 PEAKILNQQIFETIYHGALEQSCELAKIHGTYSTYEGSPISQGLLQFDLWEKNPSELWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I ++GVRNSLLVAPMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 EPLRQGIKEHGVRNSLLVAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +II D+GS+Q IP IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 647 LKDLVDLGIWDESMKQQIITDNGSIQNIPNIPQEIKDLYKTVWEISQRHVLDMAADRAVF 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLNIHM P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D +V
Sbjct: 707 IDQSHSLNIHMRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKNV 761
>gi|365765120|gb|EHN06634.1| Rnr3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 885
Score = 1071 bits (2770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 615/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 376
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CNRK+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L + FES
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
AQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 542 EXAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|324506544|gb|ADY42792.1| Ribonucleoside-diphosphate reductase large subunit, partial
[Ascaris suum]
Length = 790
Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/810 (62%), Positives = 630/810 (77%), Gaps = 31/810 (3%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKRDGR+E VHFDKI R++KL YGL+ ++ D + VSQKV AG++KGV+T QLD LAA
Sbjct: 12 YVVKRDGRREGVHFDKIAHRIEKLCYGLNPDYVDYIEVSQKVIAGLFKGVSTVQLDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA MTT HPDYA LAARIA+SNLHK TKK FSE +YN ++ ++G+ P+I+ +++
Sbjct: 72 ETAADMTTKHPDYAILAARIAISNLHKQTKKMFSEVATVLYNAHHPKTGVHTPMISKEVF 131
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+II+ NA L+S I++DRDF + YFGFKTLERSYLLK+ G+ VERPQH+ MRV++GIHK+
Sbjct: 132 DIIIANADRLNSAIVHDRDFSFTYFGFKTLERSYLLKMNGEPVERPQHLFMRVAVGIHKE 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID+AI+TY++MS+RWFTHA+PTLFN+GT PQ+SSCFL+ M++DSIEGI++TLK+CA+I
Sbjct: 192 DIDAAIETYNLMSERWFTHATPTLFNSGTRLPQMSSCFLLTMQEDSIEGIFDTLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GT+G SNG+VPMLRVFN+TARYVDQGG KR GAFA+YL
Sbjct: 252 SKSAGGIGLNVHCIRATGSSIAGTSGVSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIYL 311
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADIFE+L+L+KN G E R RDLF+ LWVPDLFM+RV+ NG+WSL CP E GL D
Sbjct: 312 EPWHADIFEYLDLRKNVGDELERCRDLFFGLWVPDLFMQRVRDNGKWSLMCPAECRGLED 371
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
CWG EFEKLY+ YE EG+ +K ++A+ LW I+T+QIETG PYM++KD CNRKSNQQN+G
Sbjct: 372 CWGDEFEKLYSKYEAEGRYRKQIEARRLWEAIITAQIETGVPYMVYKDACNRKSNQQNVG 431
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEI+EY+SPTE AVCNLASIAL RFV + + FD
Sbjct: 432 TIKCSNLCTEIVEYSSPTEVAVCNLASIALNRFV-------------------TTEKTFD 472
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL EVT +VT NLNKIID NYYPV A+ SN+RHRPIGIGVQGLAD F+L+ F S
Sbjct: 473 FKKLHEVTKVVTRNLNKIIDGNYYPVPEAKVSNMRHRPIGIGVQGLADAFMLMRYPFTSA 532
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
A++LNK IFETIY+ AL+ S E+A K GPYE+Y SP+SKGILQ DMW V P+D+ DW
Sbjct: 533 PARELNKRIFETIYHAALEASCELAKKYGPYESYEGSPISKGILQQDMWGVEPTDQCDWD 592
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+K GVRNSLL+APMPTAST+QILGNNE EPYTSN+Y+R VLSG F + N HLL
Sbjct: 593 TLRAEIAKYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGNFQIFNPHLL 652
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL ++G+W +K +II GSVQ I IP E++ +YKTVWE+ Q ++DMA DRG +I
Sbjct: 653 KDLVDLGLWDDEMKLEIIAHKGSVQAIERIPLEIRNLYKTVWELSQKDIIDMAADRGAFI 712
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
DQSQSLNI + +P++ TS+HF WS+GLKTGMYYLR+R A DA++FTVD + KE
Sbjct: 713 DQSQSLNIFIAKPSYANCTSMHFYGWSKGLKTGMYYLRTRPAVDAVQFTVDKTRLKEVNA 772
Query: 782 KPELVVDDETKMAQVVCSLTNREECMACGS 811
K + C+L++ E C+ C S
Sbjct: 773 K------------MLECALSDPEGCVMCSS 790
>gi|190406283|gb|EDV09550.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|256269776|gb|EEU05042.1| Rnr3p [Saccharomyces cerevisiae JAY291]
Length = 869
Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 615/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L + FES
Sbjct: 466 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
AQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 526 EVAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|448513340|ref|XP_003866926.1| Rnr1 large subunit of ribonucleotide reductase [Candida
orthopsilosis Co 90-125]
gi|380351264|emb|CCG21488.1| Rnr1 large subunit of ribonucleotide reductase [Candida
orthopsilosis Co 90-125]
Length = 866
Score = 1070 bits (2768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/775 (64%), Positives = 631/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL + H +PV ++QKV AGVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEPVRFDKITARVQRLCYGLDSNHVEPVAITQKVIAGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K +S+ KD+Y + N + L AP+I+ +
Sbjct: 61 AETAATMTTIHPDYAVLAARIAVSNLHKQTIKLYSQVSKDLYEYINPETNLHAPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II +NA L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRV+IGIH
Sbjct: 121 YDIIQENADELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI I+TY++MSQR+FTH SP LFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 RDIPRVIETYNLMSQRYFTHGSPCLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIF+F+ ++KNHGKEE RARDLF ALW+PDLFM+RV+ NG+W+LF PNEA GLA
Sbjct: 301 LEPWHSDIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGEWTLFSPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF +LY YEREG+ +K ++AQ LW+ IL +Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DTYGDEFVELYEKYEREGRGRKTIKAQKLWYSILEAQTETGTPFMLYKDACNTKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P E AVCNLASIALP FV E+D K+ ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFV-EQD---------------GKHAWY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +VT +VT NLN++ID NYYPV A +SN+RHRPI +GVQGLAD F++L + F+S
Sbjct: 465 NFDKLHDVTKVVTRNLNRVIDRNYYPVPEAEKSNMRHRPIALGVQGLADAFMVLRIGFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A +EGPYETY SP S+G+LQ D+W+ P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAQEEGPYETYQGSPASQGLLQYDLWDRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DELKKKLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ +K+ II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LKDLVDLGIWNDAMKSSIISNNGSIQALPNIPDEIKALYKTVWEISQKHIIDMASDRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D ++
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKAI 759
>gi|405962741|gb|EKC28390.1| Ribonucleoside-diphosphate reductase large subunit [Crassostrea
gigas]
Length = 790
Score = 1070 bits (2768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/808 (64%), Positives = 629/808 (77%), Gaps = 32/808 (3%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DGRQE V FDKIT+R+ KL YGL + DP ++ KV G+Y GVTT +LD LAAETAA
Sbjct: 12 DGRQEKVMFDKITSRISKLCYGLHADFVDPAAITLKVINGLYPGVTTVELDNLAAETAAT 71
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
MTT HPDYA LAARIAVSNLHK TKK FS+ + D+Y N ++ +P+I+ +I+ IIMK
Sbjct: 72 MTTKHPDYAILAARIAVSNLHKETKKVFSDVMDDLYKWINPKTNKHSPMISPEIHSIIMK 131
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
NA L+S II+DRDF+Y YFGFKTLERSYLL++ GKV ERPQHMLMRV++GIH +DID A
Sbjct: 132 NADRLNSAIIFDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHHNDIDGA 191
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY+++S++WFTHASPTLFNAGT RPQLSS IEGIY+TLK+CA+ISKSAG
Sbjct: 192 IETYNLLSEKWFTHASPTLFNAGTNRPQLSS----------IEGIYDTLKQCALISKSAG 241
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IR+TGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 242 GIGLNVHCIRSTGSYIAGTNGTSNGLLPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHA 301
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
D+F FL+ KKN GKEE RARDLFYA+W+PDLFM+RV+ N +W+L P+E GL DCWG E
Sbjct: 302 DVFMFLDCKKNTGKEEQRARDLFYAMWIPDLFMKRVEKNEEWTLMDPHECPGLHDCWGEE 361
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FE LY YE+EGK +K ++AQ LW+ I+ +Q ETGTPYML+KD CNRKSNQQNLGTIK S
Sbjct: 362 FETLYQKYEQEGKGRKTIKAQQLWYAIIEAQTETGTPYMLYKDHCNRKSNQQNLGTIKCS 421
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEI+EY+SP E AVCNLASIAL +V+ ++ +DFEKL
Sbjct: 422 NLCTEIVEYSSPDEVAVCNLASIALNMYVK-------------------PDKTYDFEKLK 462
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
VT ++ NLNKIID+NYYPV A RSN+RHRPIGIGVQGLAD FIL+ FES EAQ L
Sbjct: 463 SVTKVIVRNLNKIIDINYYPVPEAERSNMRHRPIGIGVQGLADAFILMRYPFESEEAQLL 522
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
NK IFETIYY AL+ S E+A ++GPYETY PVSKGILQ DMWNV P+D DW LR
Sbjct: 523 NKQIFETIYYAALEASCELAERDGPYETYQGCPVSKGILQHDMWNVTPTDLHDWNSLRAK 582
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I K+G+RNSLL+APMPTAST+QILGNNE E YTSNIYSRRVLSGEF VVN+HL+ D+TE
Sbjct: 583 IKKHGIRNSLLLAPMPTASTAQILGNNESIEAYTSNIYSRRVLSGEFQVVNQHLMKDMTE 642
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W +KNKII GS+Q I +IP+E++ +YKTVWEI Q T++ MA DRG +IDQSQS
Sbjct: 643 RGLWDDDMKNKIIAYGGSIQNIEKIPKEIRDLYKTVWEISQKTVLKMAADRGAFIDQSQS 702
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEK--PE 784
LNIH+ +PN+ K+TS+HF W GLKTGMYYLR++ AA AIKFTVD + + K E
Sbjct: 703 LNIHIAEPNYGKLTSMHFYAWKLGLKTGMYYLRTKPAASAIKFTVDKTKLTQPSGKSAAE 762
Query: 785 LVVDDETK-MAQVVCSLTNREECMACGS 811
+++ T+ MA +VCSL N+E+CM CGS
Sbjct: 763 QEMEETTQNMAAMVCSLQNKEDCMMCGS 790
>gi|365987435|ref|XP_003670549.1| hypothetical protein NDAI_0E04890 [Naumovozyma dairenensis CBS 421]
gi|343769319|emb|CCD25306.1| hypothetical protein NDAI_0E04890 [Naumovozyma dairenensis CBS 421]
Length = 915
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/775 (62%), Positives = 620/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ +L YGL D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVKFDKITARISRLCYGLDPARIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAAR+A+SNLHK T K FS I++++++ N +G AP+I++D+
Sbjct: 61 AETCAYMTTVHPDYATLAARLAISNLHKQTTKQFSTVIQNLHDYINPATGKHAPMISEDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M N L+S I+YDRDF ++YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YSIVMDNKDELNSSIVYDRDFQFNYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI +A++TY++MS R+F HASPTLFNAGTP+PQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 181 RDIKAALETYNLMSLRYFIHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F+ ++KNHGKEE RARDLF ALW+PDLFM+RV+ NGQW+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGQWTLFSPSSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETGTP++L+KD CN KSNQ+NL
Sbjct: 361 DCYGEEFEELYTRYEREGRG-KTIKAQKLWYSILEAQTETGTPFILYKDACNEKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E++ ++T NLN++ID NYYPV AR SN+RHRPI +GVQGLADT++LL M FES
Sbjct: 466 NFKKLHEISKVITRNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMLLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LNK IFETIY+ +L+ S E+A K+GPY + +SP +KGILQ DMWN P WDW
Sbjct: 526 DEAKILNKQIFETIYHASLEASCELAQKDGPYLNFEDSPSAKGILQMDMWNQKPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I K G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRNDIRKYGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K II ++GS+Q +P +P+ELK +YKT+WEI Q T++DMA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQHIITENGSIQNLPNVPDELKKLYKTIWEISQKTIIDMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS S+N+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D ++
Sbjct: 706 IDQSHSMNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQAI 760
>gi|86134367|ref|ZP_01052949.1| ribonucleoside-diphosphate reductase large subunit [Polaribacter
sp. MED152]
gi|85821230|gb|EAQ42377.1| ribonucleoside-diphosphate reductase large subunit [Polaribacter
sp. MED152]
Length = 799
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/815 (63%), Positives = 639/815 (78%), Gaps = 20/815 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDG++E V FDKITAR+KK+ YGL+ + DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGKKEPVMFDKITARVKKMCYGLN-KIVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHKNTKKSFSET+ D+Y + N R+ KAPL+ADD+
Sbjct: 60 AETAATMTTAHPDYAKLAARIAVSNLHKNTKKSFSETMDDLYFYVNPRTEKKAPLLADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEII NA LDS IIY+RDF+YDYFGFKTLERSYLLK+ G++ ERPQHMLMRVSIGIHK
Sbjct: 120 YEIIKANAEKLDSTIIYNRDFNYDYFGFKTLERSYLLKLNGQIAERPQHMLMRVSIGIHK 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID AI TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSIEGIY+TLK+ A
Sbjct: 180 NDIDEAIATYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLQMQDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSLHNIRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL+LKKNHGKEE RARDLFYA+W+ DLFM+RVQ +G+W+L CP+E L
Sbjct: 300 LEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVQEDGEWTLMCPHECPHLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YE GK +K ++A+ LW +IL SQIETGTPYML+KD NRK+NQ+NL
Sbjct: 360 DTYGEEFERLYTSYEAAGKGRKTIKARELWEKILESQIETGTPYMLYKDAVNRKTNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+ E AVCNLASIALP FV E R + ++F
Sbjct: 420 GTIRSSNLCTEIMEYTAKDEVAVCNLASIALPMFVSE---------------RENGEKYF 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ +KL +VT VT NL+ +ID N+YPV+ A SN RHRP+G+G+QGLADTFI L + F S
Sbjct: 465 NHKKLFDVTKKVTRNLDTVIDANFYPVKEAENSNFRHRPVGLGIQGLADTFINLRLPFTS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN+DIFET+YY A+ +S EIA + PY T+ SP+S+G Q +MW V S
Sbjct: 525 DEAKKLNQDIFETMYYAAVTSSMEIAKAKEPYSTFKGSPMSEGEFQFNMWGVNDNELSGN 584
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + K GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 585 WDWDKLRKNVMKYGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 644
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL E+G+W +K I+ +GS+Q I EIP EL+ +YKTVWE+ ++DMA R
Sbjct: 645 KHLLEDLVELGLWDNDMKESIMRANGSIQHIEEIPSELRELYKTVWEMSMKDIIDMARHR 704
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ + P++ K+TS+HF W GLKTGMYYLR+++A +AI+FTV
Sbjct: 705 GYFIDQSQSLNLFLKDPDYGKLTSMHFYAWKSGLKTGMYYLRTKSAVNAIQFTVSKEKKA 764
Query: 778 EKPEKPELVVDDETK-MAQVVCSLTNREECMACGS 811
E E+ + + E K M ++C+ CGS
Sbjct: 765 EVIEEEKPMTPAEFKAMVDASKGAGPDDDCLMCGS 799
>gi|403215030|emb|CCK69530.1| hypothetical protein KNAG_0C04280 [Kazachstania naganishii CBS
8797]
Length = 845
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/775 (62%), Positives = 620/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ +L YGL + DPV+V+Q++ +GVY+GV+T +LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARITRLCYGLDPKRVDPVIVTQRIISGVYEGVSTEELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDY +LAAR+A+SNLHK T K FS+ + D+Y++ N +G AP+I+D +
Sbjct: 61 AETAAYMTTIHPDYGTLAARLAISNLHKQTTKLFSQVVSDLYHYVNPANGKHAPMISDKV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+MKN L+S I+YDRDF Y+YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YDIVMKNKELLNSTIVYDRDFAYNYFGFKTLERSYLLRINGKVAERPQHLVMRVALGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++S ++TY++MS R+FTHASPTLFNAGTPRPQ+SSCFL+ MKDDSIEGI++TLKECA+
Sbjct: 181 DDLESVVRTYNLMSMRYFTHASPTLFNAGTPRPQMSSCFLIAMKDDSIEGIFDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+T+RYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTSRYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P++A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEANGDWTLFSPSDAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG E+E+LY YEREG+ K ++A LW+ IL +Q ETGTP+M++KD CNRKSNQQNL
Sbjct: 361 DVWGEEYEQLYERYEREGRG-KTIKAHKLWYAILEAQTETGTPFMIYKDACNRKSNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY++P ETAVCNLASIALP F+ S K +
Sbjct: 420 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIET--------------SEDGKVSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E++ +VT NLN++ID NYYPV A SN+RHRPI +GVQGLADT++LL + FES
Sbjct: 466 NFDKLHEISKVVTHNLNRVIDNNYYPVPEAENSNMRHRPIALGVQGLADTYMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LNK IFETIY+ +L+ S E+A K+G Y ++ P+SKGI Q DMW+ P WDW
Sbjct: 526 EEARTLNKQIFETIYHASLEASCELAQKDGTYSSWEGCPMSKGIFQMDMWDAKPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I ++G+RNSL +APMPTASTSQI+G NECFEP TSN+Y RRVLSGEF VVN +L
Sbjct: 586 ETLRKDIIEHGLRNSLTMAPMPTASTSQIMGYNECFEPLTSNMYQRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W ++K +I +GS+Q +P IP+ELK +YKTVWEI Q +++MA DR Y
Sbjct: 646 LRDLVDLGVWDESMKQHLITANGSIQGLPNIPDELKELYKTVWEISQKKILEMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKV 760
>gi|85817070|gb|EAQ38254.1| ribonucleoside-diphosphate reductase large chain [Dokdonia
donghaensis MED134]
Length = 874
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/783 (63%), Positives = 624/783 (79%), Gaps = 25/783 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQE V FDKITAR+KKL Y LS + DPV +S +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGRQEPVMFDKITARVKKLCYELS-DFVDPVKISMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MTT+HPDYA LAARI+VSNLHKNTKKSFSE + D+Y + N R+G KAP++AD++
Sbjct: 60 AETAASMTTSHPDYAKLAARISVSNLHKNTKKSFSEVMTDLYQYVNPRTGKKAPMVADEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++IM N LDS IIY+RDF YDYFGFKTLERSYLLK+ G++ ERPQHMLMRVSIGIH
Sbjct: 120 YKVIMDNKDELDSTIIYNRDFGYDYFGFKTLERSYLLKINGQIAERPQHMLMRVSIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+++A +TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ MKDDSIEGIY+TLK+ A
Sbjct: 180 NDLEAAKETYMLMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA G+YI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRAKGAYIGGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHG EE RARDLFYA+W+ DLFM+RVQ +G+W+L CPNE L
Sbjct: 300 MEPWHADIFDFLDLKKNHGAEEMRARDLFYAMWISDLFMKRVQEDGKWTLMCPNECPDLF 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ G EFE LYT YE+E + ++ ++A+ LW +I+ SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 NVHGEEFEALYTKYEQEERGRRTIKARELWEKIMESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTS E AVCNLASIALP FV KN F
Sbjct: 420 GTIRSSNLCTEILEYTSEDEVAVCNLASIALPMFV--------------------KNGAF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +T T+NLNK+ID NYYPV A SN+RHRPIG+GVQGLADTFI L + F S
Sbjct: 460 DHQELYNITVRATKNLNKVIDRNYYPVIEAENSNMRHRPIGLGVQGLADTFIKLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA++LN++IFET+Y+ A+ S ++A EGPY+++ SP+S+G Q ++WN+ S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASKDMAKVEGPYQSFEGSPISQGEFQYNLWNIKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL + +W+ +K I+ +GS+Q I IP +LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLEDLVALNLWNDDLKAAIMRANGSIQGIDVIPADLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ NF K+TS+HF W GLKTGMYYLR+++A DA KFT+ ++ K
Sbjct: 700 GYFIDQSQSLNLFMEGANFAKLTSMHFYAWQSGLKTGMYYLRTKSAVDAKKFTL-SAKKK 758
Query: 778 EKP 780
E P
Sbjct: 759 EAP 761
>gi|424842990|ref|ZP_18267615.1| ribonucleoside-diphosphate reductase, alpha subunit [Saprospira
grandis DSM 2844]
gi|395321188|gb|EJF54109.1| ribonucleoside-diphosphate reductase, alpha subunit [Saprospira
grandis DSM 2844]
Length = 807
Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/823 (59%), Positives = 635/823 (77%), Gaps = 32/823 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+GR+E V FDKI R+ L GL + D + +S+KV G+Y GV+T LD+LA
Sbjct: 5 MQVTKRNGRKEDVSFDKIMRRIYYLCDGLDNRYIDVIEISKKVILGLYDGVSTEVLDKLA 64
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+M T HPDYA LAARI+VS+LHK + SF+ET++ ++ + + ++G A +IADD
Sbjct: 65 AETAASMATEHPDYAILAARISVSDLHKGSSNSFTETMRRLHQYIDPKTGENAQMIADDF 124
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++ K++ LD+ I+++RD+DYD+FGFKTLERSYL+KV GK++ERPQ+M+MR ++GIH
Sbjct: 125 MALVEKHSEQLDAAIVHERDYDYDFFGFKTLERSYLMKVNGKIIERPQYMIMRTALGIHG 184
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++I++A++TY +MS+RWFTHA+PTLFN+GTPRPQLSSCFL+ + DDSI GI+ETL CA
Sbjct: 185 ENIEAALQTYKLMSERWFTHATPTLFNSGTPRPQLSSCFLLSITDDSIPGIFETLSRCAK 244
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYI+GT G SNGIVPMLRV+NDTARYVDQGGGKRKGAFA+Y
Sbjct: 245 ISQSAGGIGLSIHNIRAKGSYIKGTGGNSNGIVPMLRVYNDTARYVDQGGGKRKGAFAIY 304
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+FEFL+LKKNHGKEE RARDLFYALW+PDLFM+RV+ + +W+L CPNE GL
Sbjct: 305 LEPWHADVFEFLDLKKNHGKEEQRARDLFYALWIPDLFMQRVEQDAEWTLMCPNECPGLY 364
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+ Y +E EGK ++ ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 365 DSYGEEFEQRYLAFEAEGKGRQTIKARELWMKILESQIETGTPYMLYKDHANRKSNQKNL 424
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G I+SSNLCTEI+EY+SP E AVCNLASIAL +FV E +
Sbjct: 425 GVIRSSNLCTEIMEYSSPDEVAVCNLASIALSKFVTEDGQ-------------------Y 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF++L EVT IVT NLNK+ID+NYYP++ A+ SN+RHRP+GIGVQGLAD F+LL + FES
Sbjct: 466 DFQRLYEVTRIVTRNLNKVIDINYYPIQEAKNSNMRHRPVGIGVQGLADAFLLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+QLN+DIFETIY+ A+ S ++A +EG Y +Y SP+S+G Q D+W+V PSDRWDW
Sbjct: 526 EEARQLNRDIFETIYFAAMSESCQMAKEEGAYSSYEGSPISQGKFQFDLWDVTPSDRWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR LSGE+VVVNKHL
Sbjct: 586 EALRQEVLAHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRTLSGEYVVVNKHL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E G W+ +K +I +GSVQ I +P+E+K +YKT +EIKQ ++DM+ DRG +
Sbjct: 646 LKDLIERGYWTQELKEMLIAANGSVQNIEGLPQEIKELYKTAYEIKQRAIIDMSADRGAF 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK- 779
I QSQSLN+ ++ PNF K+TS+HF W RGLKTGMYYLRS+AA D IKFT+ ++ +++K
Sbjct: 706 ICQSQSLNLFVESPNFAKLTSMHFHAWKRGLKTGMYYLRSKAAVDPIKFTL-SAKYQQKF 764
Query: 780 -----------PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ +++ + CS+ N ++C+ CGS
Sbjct: 765 VGQNGGSNQALAGRTAAQIEEANSQEGLACSIDNPDDCLMCGS 807
>gi|150024560|ref|YP_001295386.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
psychrophilum JIP02/86]
gi|149771101|emb|CAL42568.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
psychrophilum JIP02/86]
Length = 806
Score = 1068 bits (2763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/829 (60%), Positives = 643/829 (77%), Gaps = 41/829 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDG +E V FDKIT R+KKL YGL+ + D V V+ +V G+Y GV TS+LD LA
Sbjct: 1 MYVIKRDGHKEPVMFDKITERIKKLCYGLN-DLVDAVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA LAARIA+SNLH NT KSFSET+ +MY++ N R+G +APL+++++
Sbjct: 60 AETAASMTIAHPDYAQLAARIAISNLHSNTNKSFSETMNEMYHYVNPRNGQEAPLLSEEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ +I +NAA L+S IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVS+GIH
Sbjct: 120 HTVIQENAAFLNSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+ S I+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 NDLKSVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+E WHADIFEFL+LKKN GKEE RARDLF+A+W DLFM+RV+ NG W+L CPNE GL
Sbjct: 300 IETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVEENGDWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEK+YT+YE+ GK +K ++A LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 DVYGEEFEKMYTNYEKAGKGRKTIKAHELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTS E AVCNLAS++LP F+ +N F
Sbjct: 420 GTIRSSNLCTEIMEYTSKDEIAVCNLASLSLPMFI--------------------ENGTF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ + L VT VT NLNK+ID NYYPV+ SN RHRPIG+GVQGLAD FI+L + F S
Sbjct: 460 NHDLLFTVTKRVTRNLNKVIDRNYYPVKEGENSNKRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
+A++LN++IFET+Y+ A+ S E+A +EGPY T+ SP+S+G Q ++W + S R
Sbjct: 520 DQAKKLNQEIFETLYFAAVTASMEMAIEEGPYSTFAGSPISQGEFQYNLWGLKDEELSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWANLRKEVMKNGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL+DL E G+W+ +K +++ ++GSVQK+ IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLNDLVERGLWTEDLKQQLMRENGSVQKL-NIPQDLKELYKTVWEMSMKDIIDMSRQR 698
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD----- 772
G ++DQSQSLN+ M N+ K+TS+HF W GLKTGMYYLR++AA DAIKFT++
Sbjct: 699 GYFVDQSQSLNLFMQDANYSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLNNDKKA 758
Query: 773 ----------TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
T++ + +P+ + ++ + M Q+ + T E+C CGS
Sbjct: 759 EPITIEVKQQTTLTEVEPQTKTMTNEEYSAMIQLAKNAT-PEDCEMCGS 806
>gi|118346189|ref|XP_976850.1| Ribonucleotide reductase, barrel domain containing protein
[Tetrahymena thermophila]
gi|89288340|gb|EAR86328.1| Ribonucleotide reductase, barrel domain containing protein
[Tetrahymena thermophila SB210]
Length = 2928
Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/779 (63%), Positives = 613/779 (78%), Gaps = 22/779 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+++ R + + +I RL+ L++ L + L+ QKV G+Y G+ T++LDELAA
Sbjct: 2087 HIINRKNEKMNLDLIRIKERLEALTFNLDRNFVNMDLIIQKVVNGMYDGIHTTELDELAA 2146
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA MT HP Y+ AARIAVSNLHK T SF ETI +YN Y ++SG +A LIA D+Y
Sbjct: 2147 ETAAYMTIIHPHYSLFAARIAVSNLHKETSSSFFETISALYN-YVDKSGRQAGLIAKDVY 2205
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
EI+ +NA ++ I YDRD+ YD+FGFKTLERSYLLK+ GK+ ERPQHMLMRVSIGIHK
Sbjct: 2206 EIVKENAEAIEKVINYDRDYTYDFFGFKTLERSYLLKIHGKIAERPQHMLMRVSIGIHKR 2265
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
D++SA +TY++MS++WFTHA+PTLFN+GTP+PQ+SSCFL+ MK DSIEGIY+TLK+ A+I
Sbjct: 2266 DLESAFRTYNLMSEKWFTHATPTLFNSGTPKPQMSSCFLLQMKGDSIEGIYDTLKQSALI 2325
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG+SVHNIRA SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FA+YL
Sbjct: 2326 SKSAGGIGISVHNIRARDSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAIYL 2385
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWH+DIFEFL LKKNHGKEE RARDLFYALW+PDLFM+RV ++G W+L CPNE GL D
Sbjct: 2386 EPWHSDIFEFLQLKKNHGKEEQRARDLFYALWIPDLFMKRVISDGTWTLMCPNECPGLPD 2445
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EFE LYT YE EGK +K + A+ LW +I+ SQIETGTPYML+KD CNRKSNQQNLG
Sbjct: 2446 VWGDEFEALYTKYENEGKGRKTINARELWQDIVDSQIETGTPYMLYKDACNRKSNQQNLG 2505
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIEYTSP E AVCNLASI+L +FV+E N +D
Sbjct: 2506 TIKSSNLCTEIIEYTSPDEVAVCNLASISLVKFVKE-------------------NGEYD 2546
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
++KL E++ +VT NLNK+ID NYYPV A+ SN+RHRPIGIGVQGLAD FI + ++FES
Sbjct: 2547 YQKLYEISKVVTFNLNKVIDENYYPVIEAKNSNMRHRPIGIGVQGLADAFIKMRISFESD 2606
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD-RWDW 600
EAQ +N+ IFETIY+ A + S EIA KEGPYET+ SP SKG LQ D+WN P +DW
Sbjct: 2607 EAQIVNEKIFETIYFGACEASMEIAIKEGPYETFKGSPASKGQLQFDLWNYKPHLCGYDW 2666
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLL++PMPTASTSQILGN E FEPYTSN+Y+RRVL+GEFV +N HL
Sbjct: 2667 DGLKQKIVEHGMRNSLLISPMPTASTSQILGNCESFEPYTSNLYTRRVLAGEFVCINPHL 2726
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL E +W+P+IKN+++ +GSV ++P+IP+++K +YKTVWE+ Q ++++AV R +
Sbjct: 2727 VQDLIERNLWNPSIKNQLLAFNGSVSQVPDIPDDIKQLYKTVWEVSQKAIINLAVGRSPF 2786
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT-SVFKE 778
IDQSQSLNIH+ P++ K+TS+HF W +GLKTGMYYLRSR AAD IKFT+D S+ +E
Sbjct: 2787 IDQSQSLNIHISDPSYSKITSMHFYAWEKGLKTGMYYLRSRPAADPIKFTLDVESLLRE 2845
>gi|347535525|ref|YP_004842950.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
branchiophilum FL-15]
gi|345528683|emb|CCB68713.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
branchiophilum FL-15]
Length = 796
Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/819 (61%), Positives = 641/819 (78%), Gaps = 31/819 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKR+G++E V FDKIT R+KKL YGL+ + DPV V+ +V G+Y GV+T++LD LA
Sbjct: 1 MFVVKRNGKKEPVMFDKITERVKKLCYGLN-DLVDPVKVAMRVIEGLYDGVSTTELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+MT HPDYA LAAR+A+SNLHKNTKKSFS+T+ DMY + N R+ APL++D++
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHKNTKKSFSDTMTDMYQYVNPRTNQAAPLLSDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +I++NAA LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV++GIH
Sbjct: 120 YRVIIENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+DS I+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 NDLDSVIETYDLMSKKYFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+E WHADIFEFL+LKKN GKEE RARDLF+A+W DLFM+RVQ + W+L CPNE GL
Sbjct: 300 IETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDAHWTLMCPNECPGLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G +FE LYT YE +GK +K ++A+ LW +IL SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 EVYGEQFETLYTSYEIQGKGRKTIKARELWEKILESQIETGTPYMLYKDAANQKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTS E AVCNLAS++LP FV + F
Sbjct: 420 GTIRSSNLCTEIMEYTSKDEIAVCNLASLSLPMFVEKGK--------------------F 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ + L +V VT NLNK+ID NYYPV+ SN+RHRPIG+GVQGLAD FI+L + F S
Sbjct: 460 NHKLLYKVAKRVTRNLNKVIDRNYYPVKEGENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
EA++LN++IFET+Y+ A+ S E+A ++G Y TY SP+S+G+ Q ++W + +D R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEDGAYSTYEGSPISQGLFQYNLWGLQDADLSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + + GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVLQYGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL+DL ++GIW+ +K +I+ +GSVQ I IP++LK +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLNDLVKLGIWTDDLKQEIMRQNGSVQNINAIPKDLKELYKTVWEMSMKDIIDMSKHR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G ++DQSQSLN+ M N+ K+TS+HF W GLKTGMYYLR+++A DAIKFT++ K
Sbjct: 700 GYFVDQSQSLNLFMQDANYAKLTSMHFYAWQSGLKTGMYYLRTKSAVDAIKFTLNNDK-K 758
Query: 778 EKPEKPELVV-----DDETKMAQVVCSLTNREECMACGS 811
E P +L +D +M ++ + + EEC CGS
Sbjct: 759 EAPATVDLHTTPIHKEDYRRMLELAKN-ADPEECEMCGS 796
>gi|313233631|emb|CBY09802.1| unnamed protein product [Oikopleura dioica]
gi|313245650|emb|CBY40318.1| unnamed protein product [Oikopleura dioica]
Length = 832
Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/848 (60%), Positives = 642/848 (75%), Gaps = 56/848 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V KRDGR E V FDKIT+R+KKL Y L P+ V++KV G+Y GVTT +LD LA
Sbjct: 4 LKVKKRDGRLEEVFFDKITSRIKKLCYNLDMNILSPLSVTRKVIDGIYDGVTTVELDNLA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYN--HYNERSGLKAPLIAD 118
AETAA M+ NHPDYA LAARI+VSNLHK TKK F+E I+D+ N YN G K PLI++
Sbjct: 64 AETAAQMSVNHPDYAILAARISVSNLHKETKKLFTEVIEDLRNVEGYN---GKKKPLISE 120
Query: 119 DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI 178
Y+I++ N L+S +I+DRD++Y+YFGFKTLERSYL+K+ GK +ERPQHMLMRVS+GI
Sbjct: 121 KTYKIVVANKDKLNSAVIHDRDYEYNYFGFKTLERSYLMKIDGKTIERPQHMLMRVSVGI 180
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
H +DID+A++TY+ MS ++FTHASPTLFN+GTPRPQ+SSCFLV M+DDSIEGIY+TLK C
Sbjct: 181 HGEDIDAALETYNFMSLKYFTHASPTLFNSGTPRPQMSSCFLVAMQDDSIEGIYDTLKTC 240
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGV+VHNIRA GSYI GTNG SNG++PMLRV+N+TARYVDQGG KR GAFA
Sbjct: 241 ALISKNAGGIGVNVHNIRARGSYIGGTNGHSNGLIPMLRVYNNTARYVDQGGNKRPGAFA 300
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
VYLEPWHADIFEFL+ KKN G EE RARDLFYALW+PDLFM+RV++NG W+LFCP+EA G
Sbjct: 301 VYLEPWHADIFEFLDAKKNTGSEETRARDLFYALWIPDLFMKRVESNGDWTLFCPDEAPG 360
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L +CWG EFE L+ YE+EG+ K+ ++AQ LW++I+ +QIE G PYML+KD CNRKSNQQ
Sbjct: 361 LHECWGEEFEALFEKYEKEGRGKETIKAQALWYKIIEAQIEVGVPYMLYKDACNRKSNQQ 420
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
NLGTIK SNLCTEI+EY+S E AVCNLAS++LP F+R+ D
Sbjct: 421 NLGTIKCSNLCTEIVEYSSKDEVAVCNLASLSLPAFIRKNDQGFS--------------- 465
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
+DF+ L + T IVT NLNK+ID+N+YPVE AR SN++HRPIGIGVQGLADTF +L +AF
Sbjct: 466 VYDFQDLYDKTKIVTRNLNKVIDINFYPVEQARFSNMQHRPIGIGVQGLADTFCMLKLAF 525
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYH------------NSPVSKGILQ 586
ES EA+ LNK IFETIY+ A++ S E+A KEGPY ++ +SP+++G Q
Sbjct: 526 ESDEAKLLNKQIFETIYFAAVEASCELAEKEGPYLSFRAHTHPITGQKNPDSPMAQGKFQ 585
Query: 587 PDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 646
D+W V P+D WDW LR+ ++++GVRNSLLV+PMPTAST+QILGNNE EP+T+NIY+R
Sbjct: 586 FDLWGVTPTDLWDWDSLREKVTRHGVRNSLLVSPMPTASTAQILGNNESIEPFTNNIYTR 645
Query: 647 RVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIK 706
RVLSGEF VVN HLL +LTE+ W I+ +I+ D+GS+Q + +IP ++K Y+TVWEIK
Sbjct: 646 RVLSGEFQVVNPHLLRELTEINYWDDEIRQQIVQDNGSIQNL-DIPADIKERYRTVWEIK 704
Query: 707 QMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADA 766
Q ++ MA DRG +IDQSQSLNIH+ QP + +TS+HF W GLKTGMYYLR++ AA A
Sbjct: 705 QKNVLQMAADRGPFIDQSQSLNIHVAQPKYGTLTSMHFTGWKMGLKTGMYYLRTKPAAAA 764
Query: 767 IKFTVDTSVFK-EKPEKPELVVDDETKM----------------------AQVVCSLTNR 803
IKFTVD S K E+ E E+ ++ TK A +VCSL N+
Sbjct: 765 IKFTVDKSKVKVEEKENVEVKIEAATKSPVKAVSSLKEGPSEDDIRRLNEAALVCSLENK 824
Query: 804 EECMACGS 811
E CM C S
Sbjct: 825 EACMMCSS 832
>gi|367005841|ref|XP_003687652.1| hypothetical protein TPHA_0K00840 [Tetrapisispora phaffii CBS 4417]
gi|357525957|emb|CCE65218.1| hypothetical protein TPHA_0K00840 [Tetrapisispora phaffii CBS 4417]
Length = 877
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/778 (62%), Positives = 619/778 (79%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDG +E V FDKITAR+ +L YGL ++H DPV V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVVKRDGHKEPVRFDKITARISRLCYGLDSDHVDPVKVTQRIISGVYEGVTTEELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAAR+AVSNLHK T K FS+ + Y++ N +G A L++ D+
Sbjct: 61 AETAAYMTTIHPDYAVLAARLAVSNLHKQTTKLFSDVVDQFYHYINPDTGKPASLVSKDL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++ +M + ++S I YDRDF ++YFGFKTLERSYLL++ GKV ERPQHM+MRVS+GIH
Sbjct: 121 FDNVMAHKDEINSAIFYDRDFQFNYFGFKTLERSYLLRMFGKVAERPQHMIMRVSLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI SAI++Y+ MSQR+FTHASPTLFNAGTP+PQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 181 SDIKSAIESYNFMSQRYFTHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG +HNIR+TGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGCHIHNIRSTGSYIAGTNGTSNGIIPMIRVFNNTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIF+F++++KNHGKEE RARDLF ALWVPDLFM+RV+ NG W+LF P++A GL+
Sbjct: 301 LEPWHDDIFDFVDIRKNHGKEEIRARDLFPALWVPDLFMKRVEENGDWTLFSPSDAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D GAEFE LY Y EG+ ++ ++AQ LW+ IL +Q ETGTP++++KD CN KSNQ+NL
Sbjct: 361 DVCGAEFEALYNKYVAEGRGRRTIKAQKLWYSILEAQTETGTPFIVYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K + +
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTQIY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL E+ ++T NLN++ID NYYPVE AR SN RHRPI +GVQGLADTF LL + FES
Sbjct: 467 NFEKLHEIAKVMTRNLNRVIDRNYYPVEEARNSNFRHRPIALGVQGLADTFQLLRIPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A++LN IFET+Y+ +L+ S E+A KEGPY+TY SPVS+GILQ DMW V P+D WDW
Sbjct: 527 QKAKELNIHIFETLYHGSLEASCELAQKEGPYQTYEGSPVSQGILQYDMWGVNPTDLWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+APMPTASTSQILG NECFEP+TSN+Y RR LSGEF +VN +L
Sbjct: 587 TSLKAQIKEHGVRNSLLLAPMPTASTSQILGYNECFEPFTSNMYQRRTLSGEFQIVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W+ ++K +I +GS+ +P +P+ELK IYKTVWEI Q T+++ A DR +
Sbjct: 647 LRDLVDLGLWNDSMKQHLITANGSIADLPNVPQELKDIYKTVWEISQKTIIEFAADRSAF 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
IDQS SLNIH+ P F K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V ++
Sbjct: 707 IDQSHSLNIHIRAPTFGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDAKVAEQ 764
>gi|157126851|ref|XP_001660977.1| ribonucleoside-diphosphate reductase large chain [Aedes aegypti]
gi|18087345|gb|AAL58843.1|AF411296_1 ribonucleotide reductase 1 [Aedes aegypti]
gi|108873131|gb|EAT37356.1| AAEL010644-PA [Aedes aegypti]
Length = 844
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/856 (60%), Positives = 643/856 (75%), Gaps = 64/856 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E VH DKIT+R++KL YGL+ + DPV ++ KV G+Y GVTT +LD LA
Sbjct: 8 MYVFKRDGRKEEVHLDKITSRIQKLCYGLNMDFVDPVAITLKVINGLYSGVTTQELDNLA 67
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT H DYA LAAR+AVSNLHK TKK FS+ + D+Y NE + P+I++
Sbjct: 68 AETAATMTTEHADYAILAARLAVSNLHKETKKHFSDVMHDLYMMENEHLKKRTPMISEFH 127
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++IM +A L+S IIYDRDF Y+YFGFKTLERSYLLK++GK+VERPQHMLMRV+IGIH
Sbjct: 128 YKVIMDHADRLNSAIIYDRDFGYNYFGFKTLERSYLLKIKGKIVERPQHMLMRVAIGIHG 187
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+R+FTHASPT+F A T RPQLSSCFL+ M DDSIEGIY+TLK+CA+
Sbjct: 188 EDIDAAIETYNLLSERYFTHASPTMFAAATCRPQLSSCFLLTMSDDSIEGIYDTLKQCAL 247
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+YI GTNG SNG++PMLRV+N+TA+YVDQGG KR GAFA+Y
Sbjct: 248 ISKSAGGIGLNVHCIRAKGTYIAGTNGISNGLIPMLRVYNNTAKYVDQGGNKRPGAFAIY 307
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+FEFL+LKKN G E+ RARD+FYALW+PDLFM+RV+ N W L CP+E GL+
Sbjct: 308 LEPWHGDVFEFLDLKKNTGAEDVRARDMFYALWIPDLFMKRVEANEDWCLMCPHECPGLS 367
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLYT YE EG+ + V+AQ+LWF I+ SQ+ETG PYML+KD CNRKSNQQN+
Sbjct: 368 DTWGEEFEKLYTSYEAEGRYIRKVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNI 427
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+S E AVCNLASIAL FV+ ++ +
Sbjct: 428 GTIKCSNLCTEIVEYSSKDEIAVCNLASIALNMFVK-------------------PDKTY 468
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV I T+NLNKIID+N+YPV A+RSN+RHRPIGIGVQG+AD FIL+ ++S
Sbjct: 469 DFQKLKEVAKIATKNLNKIIDINFYPVPEAKRSNMRHRPIGIGVQGMADAFILMRYPYDS 528
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN+ IFETIYY AL+ S E+A KEG YETY PVSKG+LQ DMWN P+D WDW
Sbjct: 529 EEAQKLNQQIFETIYYGALEASCELAEKEGTYETYPGCPVSKGVLQYDMWNKEPTDMWDW 588
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE FEPYTSN+Y+RRVLSGEF +VN HL
Sbjct: 589 AALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQIVNHHL 648
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE+ +W +KN+II ++GS+Q I EIP+ ++ +YKTVWEI + + MA DRG +
Sbjct: 649 LKDLTELDLWDDDMKNRIIANNGSIQNIEEIPQHIRDLYKTVWEISVKSCIKMAADRGAF 708
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQS NIH+ +PN+ K+TS+HF W GLKTGMYYLR++ A +AI+FTVD + +
Sbjct: 709 IDQSQSFNIHVAEPNYGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKTRLNQSN 768
Query: 779 ----------KPEK--------------------PELVVDDET-------------KMAQ 795
P K P D + +MA+
Sbjct: 769 RINNSDTVNGSPSKMNGATSTPSKMNGTATSSASPVKASSDNSQQQLNGSHAERNRRMAE 828
Query: 796 VVCSLTNREECMACGS 811
+VCSL N+E+CM CGS
Sbjct: 829 MVCSLENKEDCMMCGS 844
>gi|406025256|ref|YP_006705557.1| ribonucleoside-diphosphate reductase large subunit [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
gi|404432855|emb|CCM10137.1| Ribonucleoside-diphosphate reductase large subunit [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
Length = 778
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/772 (63%), Positives = 616/772 (79%), Gaps = 20/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKRDGR E++ FDKIT R++KL YGL+ ++ D + + +K+ G++ V TS +D LA
Sbjct: 1 MLVVKRDGRLESIKFDKITLRIEKLCYGLNRDYIDIIAIVKKIIEGIHDRVATSAIDSLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET AAM HPDY LAARIA+SNLHK T KSFS TIK +Y + N +G A LI I
Sbjct: 61 AETVAAMAVYHPDYTILAARIAISNLHKATSKSFSSTIKRLYTYVNPATGTNASLIDKAI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+ ++AA LD I+++RDF YD+FGFKTLERSYLLK+ GK+VERPQ+MLMRV++GIH
Sbjct: 121 YKIVSEHAATLDDAIVHERDFSYDFFGFKTLERSYLLKINGKIVERPQYMLMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++++ + TY +MS++WFTHA+PTLFNAGTPRPQLSSCFL+ ++DSIEGIY TL +CA
Sbjct: 181 DNLNAVLDTYQLMSEKWFTHATPTLFNAGTPRPQLSSCFLLTTQNDSIEGIYNTLTQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+ AGGIG+S+HNIRATGSYIRGTNG SNGIVPMLR F+ TARYVDQGGG+RKG+F++Y
Sbjct: 241 ISQFAGGIGLSIHNIRATGSYIRGTNGMSNGIVPMLRNFDMTARYVDQGGGRRKGSFSIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL LKKNHGKEE RARDLFY LW+PDLFMERV+ + WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFDFLELKKNHGKEERRARDLFYGLWIPDLFMERVEADEMWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+GA FE+ Y YE+EG+A+ ++AQ LWF IL +QIETGTPYML+KD N KSNQ+NL
Sbjct: 361 DCYGAAFEQKYKQYEKEGRARTSIKAQTLWFAILEAQIETGTPYMLYKDAANEKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT+P E AVCNLASIALP FV + NR F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEIAVCNLASIALPMFVDD-------------------NRSF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D KL EVT +VT+NLNK+ID NYYP+ AR SNL+HRP+G+GVQGLAD F+ + + F+S
Sbjct: 462 DHTKLYEVTYLVTKNLNKVIDRNYYPLPEARYSNLKHRPMGLGVQGLADAFLKMRLVFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD-RWD 599
PEA+ LN++IFETIY+ AL S ++A KEG YE+Y SP+S+GILQ DMW V PS RW+
Sbjct: 522 PEARLLNQEIFETIYFAALTASKDLAQKEGVYESYPGSPMSEGILQFDMWGVTPSSGRWN 581
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I+++G+RN+LLVAPMPTASTSQILGNNECFEPYT+NIY+RRVLSGEF+VVNK+
Sbjct: 582 WDHLRKEIAQHGIRNALLVAPMPTASTSQILGNNECFEPYTANIYTRRVLSGEFIVVNKY 641
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL ++G+W+ +K +I +GS+Q+I IPE +K +Y+TVWEI Q +++DMA DR
Sbjct: 642 LLADLIQLGLWNEEVKEALIIGNGSIQQIACIPEYIKKMYRTVWEIPQKSIIDMAADRAP 701
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
YI QSQSLN+++ K+TS+HF W +GLKTGMYYLR++AAADAIKFT+
Sbjct: 702 YICQSQSLNLYVKDATMAKLTSMHFYAWKKGLKTGMYYLRTKAAADAIKFTI 753
>gi|401882642|gb|EJT46892.1| ribonucleoside-diphosphate reductase large chain [Trichosporon
asahii var. asahii CBS 2479]
gi|406700693|gb|EKD03858.1| ribonucleoside-diphosphate reductase large chain [Trichosporon
asahii var. asahii CBS 8904]
Length = 863
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/778 (63%), Positives = 612/778 (78%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M++ KRDGR+E V FDK+TAR+ KLSYGL T +P +++QKV G++ +TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDTNFVEPAIITQKVVQGIHPYITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA++ HPD+A LAARIA+SNLHK TKK FS+ I+D+Y +N ++G AP++++++
Sbjct: 63 AETAAALSPMHPDWAILAARIAISNLHKETKKQFSQVIEDLYQWHNPKTGKHAPMVSEEV 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+ KN LD+ IIYDRDF Y+YFGFKTLERSYLL++ GK+ ERPQHMLMRVS+GIH
Sbjct: 123 YNIVSKNKEALDAAIIYDRDFAYNYFGFKTLERSYLLRIDGKIAERPQHMLMRVSVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ I+TY++MS+R+FTHASPTLFN+GTP Q+SSCFLV MK+DSI+GIY+TLK CA
Sbjct: 183 DDIEKVIETYNLMSERYFTHASPTLFNSGTPHAQMSSCFLVAMKEDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL+L+KNHGKEE RARDLFYALW+ DLFM+RV+++G W+L CP E GLA
Sbjct: 303 LEPWHADIFDFLDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D EFEKLY YER GK +K ++AQ LWF IL +Q ETG P+ML+KD NRKSNQQ+L
Sbjct: 363 DVHSEEFEKLYESYERAGKGRKTIKAQKLWFAILEAQTETGGPFMLYKDAANRKSNQQHL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEY+SP E AVCNLASIALP FV + + +
Sbjct: 423 GTIKSSNLCTEIIEYSSPDEVAVCNLASIALPAFV------------------NFETKTY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+T +VT NL+++I NYYPV AR SN+RHRP+G+GVQGLADTF+ L M F+S
Sbjct: 465 DFKKLHEITKVVTRNLDQVITRNYYPVPEARNSNMRHRPVGLGVQGLADTFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+QLN IFETIY+ AL+ S E+A K G Y +Y SP+S+G +QPD+W V P+D WDW
Sbjct: 525 REARQLNLQIFETIYHAALEASCEMAQKLGKYPSYEGSPMSQGKIQPDLWGVEPTDLWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+++GVRNSLLVAPMPTASTSQILG NECFEPYTS +YSRRVLSG+F VV L
Sbjct: 585 TELRANIAQHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYSRRVLSGDFAVVCPWL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +GIW +KN II GS+Q IP IP+++K IYKTVWEI Q ++D+A DRG +
Sbjct: 645 LRDLINLGIWDEEMKNLIIASGGSIQHIPNIPDDIKAIYKTVWEISQKAVIDLAADRGAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
IDQSQSLNIH+ P+F ++TS+HF W RGLKTG YYLR+R AA+AI+FT+D K+
Sbjct: 705 IDQSQSLNIHLANPSFSQLTSMHFYGWKRGLKTGAYYLRTRPAANAIQFTIDAKTLKQ 762
>gi|298711866|emb|CBJ32887.1| ribonucleotide reductase large chain subunit [Ectocarpus
siliculosus]
Length = 797
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/772 (64%), Positives = 628/772 (81%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E V FDKITAR+ L YGL ++ +P L++QKV +GVY GVTTS+LDELA
Sbjct: 1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+TAA T HPD + LAARI+VSNLHK T K+FS+TI+ ++ + ++G ++ LI+D++
Sbjct: 61 AQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ I+M+N LDS I +RDF+YDYFGFKTLE+SYLL+ G VVER QHMLMRV+IGIH+
Sbjct: 121 FRIVMENKEVLDSAIQDERDFEYDYFGFKTLEKSYLLRANGFVVERIQHMLMRVAIGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI++Y +MSQR FTHASPTLFNAGTPRPQLSSCFL+ +K+DSIEGIY+TLK+CA
Sbjct: 181 TDIDSAIESYDLMSQRLFTHASPTLFNAGTPRPQLSSCFLLNVKEDSIEGIYDTLKQCAC 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIGVS+H+IRAT SY+ G+NG+SNG+VPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKFAGGIGVSIHSIRATDSYVAGSNGSSNGLVPMLRVFNDTARYVDQGGGKRKGSFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
EPWHADIF FL+L+KNHG E RARDLFYALW+PDLFM+RV+ +G WSLFCPNEA GL
Sbjct: 301 REPWHADIFAFLDLRKNHGNELERARDLFYALWIPDLFMKRVEADGDWSLFCPNEAPGLP 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE +G A++ ++A+ LW I+ +Q+ETGTPYMLFKD CN KSNQ+NL
Sbjct: 361 DVFGDEFEALYKSYEAKGLARRSIKARQLWVAIMDAQVETGTPYMLFKDACNSKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT P E AVCNLASI+LP FV + + P+ F
Sbjct: 421 GTIKSSNLCTEIIEYTDPDEVAVCNLASISLPAFVSAGE---DGQPA------------F 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF +L EVT +VT NLN++IDVN+YPVE A+RSN RHRP+G+GVQGLAD FI++ FES
Sbjct: 466 DFHRLYEVTKVVTRNLNRVIDVNFYPVEEAKRSNFRHRPVGLGVQGLADAFIMMRFPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A +LN+DIFETIY+ A++ S E+A K+G YETY SP S+G+LQ DMW V PSDRWDW
Sbjct: 526 EKAAKLNRDIFETIYFGAVEASVELAEKQGTYETYEGSPASQGLLQYDMWGVTPSDRWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++++G+RNSLL+APMPTAST+QILGNNE EP+TSN+Y+RRVL+GEF VVNKHL
Sbjct: 586 AGLKAKMAQHGLRNSLLLAPMPTASTAQILGNNESVEPFTSNMYNRRVLAGEFAVVNKHL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT G+W+P+++N+II D GSVQ++ +IP++LK +YKTVWEIKQ ++DM+ DRG +
Sbjct: 646 LRDLTTRGLWTPSVRNQIIADQGSVQRV-DIPQDLKDLYKTVWEIKQKVVIDMSADRGAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
I QSQS+N+HM P K+TS+HF +W +GLKTGMYYLR++ A AI+FTVD
Sbjct: 705 ICQSQSMNVHMADPTQGKLTSMHFYSWKKGLKTGMYYLRTKPKAHAIQFTVD 756
>gi|366989059|ref|XP_003674297.1| hypothetical protein NCAS_0A13590 [Naumovozyma castellii CBS 4309]
gi|342300160|emb|CCC67917.1| hypothetical protein NCAS_0A13590 [Naumovozyma castellii CBS 4309]
Length = 860
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/775 (63%), Positives = 614/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ +L YGL D V V+Q++ GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITARISRLCYGLDPARIDAVKVTQRIINGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAAR+A+SNLHK T K FS+ I D++++ N +G+ +P+I+ +
Sbjct: 61 AETCAYMTTVHPDYATLAARLAISNLHKQTTKQFSQVIYDLHHYVNPANGIHSPMISKKV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+MKN L+S I+YDRDF ++YFGFKTLERSYLLK+ GKV ERPQH++MRV++GIH
Sbjct: 121 YDIVMKNKDLLNSTIVYDRDFSFNYFGFKTLERSYLLKLDGKVAERPQHLIMRVALGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+DS I+TY++MS R+F HASPTLFNAGTP+PQ+SSCFL+ MKDDSI+GI+ETLKECA+
Sbjct: 181 EDLDSVIETYNLMSLRYFIHASPTLFNAGTPKPQMSSCFLIAMKDDSIDGIFETLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F+ ++KNHGKEE RARDLF ALWVPDLFM+RV+ NGQW+LF P+ A GL
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWVPDLFMKRVEENGQWTLFSPSIAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRK+NQ NL
Sbjct: 361 DVYGDEFEELYTRYEKEGRG-KTIKAQKLWYAILEAQTETGTPFVIYKDACNRKTNQSNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSSPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL E+T +VT NLN++ID NYYPV A RSN+RHRPI +GVQGLADT+++L + FES
Sbjct: 466 NFEKLHEITKVVTRNLNRVIDNNYYPVPEAERSNVRHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LNK IFET+Y+ +L++S E+A KEGPYET+ P SKGILQ DMWN P WDW
Sbjct: 526 EEATILNKQIFETMYHASLESSCELAQKEGPYETWEGCPASKGILQMDMWNAEPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDVVKYGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K II +GS+Q +P +P+ELK +YKT+WEI Q ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQHIITQNGSIQNLPNVPDELKSLYKTIWEISQKKIIDMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKV 760
>gi|350414638|ref|XP_003490375.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Bombus impatiens]
Length = 805
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/817 (63%), Positives = 632/817 (77%), Gaps = 24/817 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E VHFDKIT+R++KL Y L ++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRIQKLCYNLDMDYVDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIA+SNLHK TKKSFSE I ++YN + P+I++
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETKKSFSEVIHNLYNVKEHYTNEVRPVISEKY 126
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y II NA L+S IIYDRDF Y+YFGFKTLERSYLLK+QGKVVERPQHMLMRV++ IH
Sbjct: 127 YNIIQNNANKLNSAIIYDRDFSYNYFGFKTLERSYLLKIQGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID AI+TY+ +S+R+FTHASP+LF A T + Q+SSCFL+ M DDSI+GIY+TLK CA+
Sbjct: 187 EDIDKAIETYNFLSERYFTHASPSLFFACTRQQQMSSCFLLTMSDDSIDGIYDTLKRCAL 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GT G SNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 306
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LKKN GKEE+RAR+LFYALW+PDLFM+RV NG WSL CP+E+ GL
Sbjct: 307 LEPWHADIFEFLDLKKNIGKEENRARELFYALWIPDLFMKRVFDNGVWSLMCPHESPGLP 366
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LYT YE E + K+ +QA++LW IL SQ+ETGTPYML+KD CNRKSN QNL
Sbjct: 367 DVWGDEFEALYTRYENEKRYKRQIQARDLWTAILVSQVETGTPYMLYKDHCNRKSNHQNL 426
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI++Y+SP E AVCNLASIA+ FV S N+ F
Sbjct: 427 GTIKSSNLCTEIVQYSSPDEIAVCNLASIAVNMFV------------------NSSNQTF 468
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL +VT IVT NL+KIIDVNYYPV A+ SN +HRPIGIG+QGLAD F+L+ FES
Sbjct: 469 DFEKLRKVTKIVTCNLDKIIDVNYYPVHEAKTSNFKHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN IFET+YY AL+ S E+AA++G YETY SPVSKGILQ DMWNV P++ W+W
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAAEKGTYETYEGSPVSKGILQYDMWNVTPTNLWNW 588
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 589 TILKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYARRVLSGEFQVVNPHL 648
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE +W +KN+II ++GSVQ I IP +LKM+YKTVWEI Q ++ MA DRG +
Sbjct: 649 LRDLTERDLWDEDMKNEIIANNGSVQNIERIPNDLKMLYKTVWEIPQKVILKMAADRGAF 708
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+N+HM +P +K+TS+HF W GLKTGMYYLR++ A +A++FTVD S +
Sbjct: 709 IDQSQSMNVHMAKPTTEKLTSMHFYGWKMGLKTGMYYLRTKPAVNALQFTVDKSKLRNTV 768
Query: 781 EKP------ELVVDDETKMAQVVCSLTNREECMACGS 811
+DE + CS N + CMACGS
Sbjct: 769 STTSNQSVNSESSNDEKLIEVFACSRENGDACMACGS 805
>gi|383853838|ref|XP_003702429.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Megachile rotundata]
Length = 821
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/833 (62%), Positives = 636/833 (76%), Gaps = 40/833 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR+E VHFDKIT+R++KL Y L ++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MFVVKRDGRKEDVHFDKITSRIQKLCYNLDMDYVDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKKSFSE I D+Y+ + P+I++
Sbjct: 67 AETAATMTTKHPDYAVLAARIAVSNLHKETKKSFSEVIHDLYHVQEQYLNKPRPVISEKY 126
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y II NA+ L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKVVERPQHMLMRV++ IH
Sbjct: 127 YNIIQNNASKLNSAIIYDRDFSYNYFGFKTLERSYLLKIHGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI+ AI+TY+ +S+R+FTHASPTLF+A T Q+SSCFL+ M +DSIEGIY+TLK CA+
Sbjct: 187 EDIEKAIETYNFLSERYFTHASPTLFSACTVTQQMSSCFLLSMTEDSIEGIYDTLKRCAL 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GT G SNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 306
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LKKN GKEE+RAR+LFYALW+PDLFM+RV NG W+L CP+E+ GLA
Sbjct: 307 LEPWHADIFEFLDLKKNTGKEENRARELFYALWIPDLFMKRVLENGVWTLMCPHESPGLA 366
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LYT YE E + K+ +QA++LW IL +Q+ETGTPYML+KD CNRKSNQQN+
Sbjct: 367 DVWGDEFETLYTRYENEKRFKRQIQARDLWTAILIAQVETGTPYMLYKDHCNRKSNQQNI 426
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTE+++Y+S E AVCNLASIA+ FV S N+ F
Sbjct: 427 GTIKSSNLCTEVVQYSSADEVAVCNLASIAVNMFV------------------NSSNKTF 468
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT IVT NL+K+IDVNYYP+ A++SN RHRPIGIG+QGLAD F+L+ FES
Sbjct: 469 DFQKLKKVTKIVTCNLDKVIDVNYYPIPEAKKSNFRHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN IFET+YY AL+ S E+A ++G YETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAEEKGTYETYEGSPVSKGILQYDMWNVTPTDLWDW 588
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 589 AALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 648
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE +W +KN+II ++GS+Q I IP +LKM+YKTVWEI Q ++ MA DRG +
Sbjct: 649 LRDLTERDLWDENMKNEIIANNGSIQDIERIPSDLKMLYKTVWEISQKVVLKMAADRGAF 708
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLN+HM +P +K+TS+HF W GLKTGMYYLR++ AA+A++FTVD S +
Sbjct: 709 IDQSQSLNVHMAKPTTEKLTSMHFYGWQMGLKTGMYYLRTKPAANALQFTVDKSKLRSAT 768
Query: 781 EKP------------ELVVDDETKMAQ----------VVCSLTNREECMACGS 811
P E ++ K Q + CS N + CMACGS
Sbjct: 769 STPANQSLNLESGNDEGYMNSSKKWLQDRSSEDIEAVLACSRENGDACMACGS 821
>gi|401625263|gb|EJS43279.1| rnr3p [Saccharomyces arboricola H-6]
Length = 869
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/775 (62%), Positives = 613/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MFVIKRDGRQEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFKYTYFGFKTLERSYLLRLDGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++ +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 181 SDLEAVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGAWTLFSPSAAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LYT YE EG+ K ++AQ LW+ IL +Q ETGTP+M++KD CNRK+NQQNL
Sbjct: 361 DVWGDEFEALYTRYETEGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEL--------------SEDGKTATY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FE L E+ ++T NLN++ID NYYPV AR SN+RHRPI +GVQGLADT+++L + FES
Sbjct: 466 NFESLHEIAKVITHNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 526 DEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I ++G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVEHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I ++GS+Q +P +P+ LK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITENGSIQGLPNVPQVLKELYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|389739083|gb|EIM80277.1| hypothetical protein STEHIDRAFT_105343 [Stereum hirsutum FP-91666
SS1]
Length = 917
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/777 (63%), Positives = 617/777 (79%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KR R+E++ DK+TAR+KKLSYGL H D V+QKV GVY G+TTS+LD LAA
Sbjct: 15 YVFKRGKRKESIQADKLTARVKKLSYGLDDMHLDANEVTQKVIQGVYPGITTSELDNLAA 74
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA +TT HPDYA LAARIAVSNLHK TK+SFS+TI D+Y++ N ++G A +I+D+ Y
Sbjct: 75 ETAAYLTTKHPDYAILAARIAVSNLHKTTKESFSQTISDLYHYVNPKTGRAAGMISDETY 134
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+ + ++A LDS I++ RDF+Y++FG+KTLERSYLLK+ G+ ERPQH+LMRV+ GIH +
Sbjct: 135 KFVNEHAERLDSAIVWSRDFEYNFFGYKTLERSYLLKINGRTAERPQHLLMRVACGIHPN 194
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID A+++Y +MSQR+FTH SPTLFNAGTP PQL+SCFLVCMKDDSIEGIY+TLK CA+I
Sbjct: 195 DIDRALESYTLMSQRYFTHGSPTLFNAGTPNPQLASCFLVCMKDDSIEGIYDTLKSCAMI 254
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG+++HNIRATGSYI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+YL
Sbjct: 255 SKSAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIYL 314
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+R+ NG WSLF P+EA GL +
Sbjct: 315 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRIGENGNWSLFSPDEAPGLHE 374
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G EFE LY YEREGKA K + AQ LW+ I+ +QIETG P+M +KD NRK+NQ+NLG
Sbjct: 375 VYGDEFEALYEKYEREGKAMKTIPAQKLWYAIMDAQIETGGPFMCYKDAANRKTNQKNLG 434
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
IKSSNLCTEI+EY++P ETAVCNLAS+ALP F+ +N ++
Sbjct: 435 VIKSSNLCTEIMEYSAPDETAVCNLASLALPSFI--------------------ENGVYN 474
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL +VT +VT NLN++ID+N+YP+ AR SN+RHRPIG+GVQGLAD F++L M F+S
Sbjct: 475 FQKLHDVTKVVTYNLNRVIDLNFYPIPEARNSNMRHRPIGLGVQGLADAFMILRMPFDSD 534
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA++LN IFETIY+ A++ S +IA EG Y +Y SP SKG LQ D+W V PS+ WDW
Sbjct: 535 EARKLNLQIFETIYHAAVEASCDIAKVEGAYASYEGSPASKGELQFDLWGVKPSELWDWA 594
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ ++++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 595 ELKAKVAQHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 654
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L + +W +KN+II +GSVQ IPEIP+++K IYKTVWEI Q ++D+A DRG +I
Sbjct: 655 RELIRLDLWDDNMKNRIIAHNGSVQYIPEIPDDVKAIYKTVWEISQKKVLDLAADRGAFI 714
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLNIH+ P ++TS+HF W RGLKTGMYYLR++ A+ AI+FT+D ++ KE
Sbjct: 715 CQSQSLNIHLQAPTVGQLTSMHFYGWKRGLKTGMYYLRTKPASQAIQFTLDHNLVKE 771
>gi|58267480|ref|XP_570896.1| ribonucleoside-diphosphate reductase large chain [Cryptococcus
neoformans var. neoformans JEC21]
gi|134112167|ref|XP_775272.1| hypothetical protein CNBE3330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257927|gb|EAL20625.1| hypothetical protein CNBE3330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227130|gb|AAW43589.1| ribonucleoside-diphosphate reductase large chain, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 863
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/777 (63%), Positives = 610/777 (78%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M++ KRDGR+E V FDK+TAR+ KLSYGL +P ++QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDPNFVEPAEITQKVVQGIHAGITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIA+SNLHK TKK FS + D++ N ++G +P+I DD+
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKVFSAVVHDLHAWVNPKTGKHSPMIDDDV 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M N LDS IIYDRDF Y+YFGFKTLERSYLL++ GK+VERPQHM+MRV++GIH
Sbjct: 123 YKIVMDNKDILDSAIIYDRDFAYNYFGFKTLERSYLLRINGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+ID I+TY++MS+R+FTHASPTLFNAGTPRPQ+SSCFLV MKDDSI+GIY+TLK CA
Sbjct: 183 SNIDKVIETYNLMSERYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGI+PMLR ++ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIIPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+F++L+KNHGKEE RARDLFYALW+PDLFM+RV+++G W+L CP E GLA
Sbjct: 303 LEPWHADVFDFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEKLY YER+GK +K ++AQ LWF IL +Q ETG PY+ +KD N KSNQ+ L
Sbjct: 363 DVYGEEFEKLYESYERKGKGRKTIKAQKLWFAILEAQTETGVPYICYKDAANSKSNQKQL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EY+SP E AVCNLAS+ALP FV + R +
Sbjct: 423 GTIKSSNLCTEIMEYSSPDEVAVCNLASLALPAFV------------------DLERRVY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+T +VT+NL+ +I NYYPV AR SN+RHRP+G+GVQGLAD F+ L M F+S
Sbjct: 465 DFKKLHEITKVVTKNLDTVITRNYYPVPEARNSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA++LN IFETIY+ AL+ S E+A + G YE+Y SP+SKGILQ DMW +P+D WDW
Sbjct: 525 PEARELNIQIFETIYHAALEASCELAEEFGTYESYEGSPISKGILQYDMWGRVPTDLWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y+RRVLSG+F VV L
Sbjct: 585 TELKAKIAQHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + +W +K II GS+Q IP IP++LK IY+TVWEI Q ++D+A DRG +
Sbjct: 645 LRDLINLDLWDDNMKQLIIAAGGSIQSIPNIPDDLKKIYRTVWEISQKAVIDLAADRGAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ P+F ++TS+HF W RGLKTG YYLR+R +A+AI+FTVD S K
Sbjct: 705 IDQSQSLNIHLSNPSFPQLTSMHFYGWKRGLKTGCYYLRTRPSANAIQFTVDASTLK 761
>gi|156101822|ref|XP_001616604.1| ribonucleoside-diphosphate reductase large chain [Plasmodium vivax
Sal-1]
gi|148805478|gb|EDL46877.1| ribonucleoside-diphosphate reductase large chain, putative
[Plasmodium vivax]
Length = 848
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/825 (62%), Positives = 626/825 (75%), Gaps = 36/825 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI NLHKNT E + +Y Y + G A LI+ ++
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIGEVAEALYK-YTDVRGRPASLISKEV 159
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE ++++ L+ EI Y RDF+YDYFGFKTLERSYLL++ GK++ERPQH+LMRVSIGIH
Sbjct: 160 YEFMIEHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINGKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ A++TYH+MSQ++FTHA+PTLFN+GTPRPQ+SSCFL+CMK DSIEGI+ETLK+CA+
Sbjct: 220 GDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLCMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+L+KNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 399
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLYT YE E KK V AQ+LWF IL SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 400 ESWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 459
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC EIIEYTSP E AVCNLASIAL +FV DV + R F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV---DV---------------EKREF 501
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+T I+T NL++II+ NYYPVE A+RSN RHRPIGIGVQGLADTF+LL +ES
Sbjct: 502 NFKKLYEITKIITRNLDQIIERNYYPVEEAKRSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
A++LNK IFET+YY AL+ S E+A GPYETY SP S+GILQ DMWNV + WD
Sbjct: 562 DSAKELNKRIFETMYYGALEMSMELAQLYGPYETYQGSPASQGILQFDMWNVKVDKKYWD 621
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDELKAKIKKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL + G+W +K ++I +GSVQ I EIP +LK +YKTVWEIKQ ++DMA DRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPADLKELYKTVWEIKQKNIIDMAADRGA 741
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE- 778
+IDQSQSLNI++ +P F K++S+HF W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 779 ---KPEKP---------ELVVDDETKMAQVVCSL--TNREECMAC 809
K +P E + D T VVC L N ++C+ C
Sbjct: 802 AKMKNAEPVAITREVSRETISTDSTVTQNVVCPLRRNNDDQCLMC 846
>gi|323449664|gb|EGB05550.1| hypothetical protein AURANDRAFT_30730 [Aureococcus anophagefferens]
Length = 787
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/811 (60%), Positives = 624/811 (76%), Gaps = 24/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR+G++E V +DKIT+R+KKL YGL ++ P ++QKV GVY GVTT +LDELA
Sbjct: 1 MQVVKRNGKKETVRYDKITSRIKKLCYGLDAKYIKPNQITQKVIQGVYDGVTTHELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI+VSNLHK+T K+FS+ ++ ++ H + ++ A LI+D+
Sbjct: 61 AQTTAYMATQHPDFSVLAARISVSNLHKSTDKTFSDVVEKLHKHVHPKTKKPAALISDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y + K+ +++ I+YDRDF+YDYFGFKTLERSYL+++ G + ERPQHM+MRV++GIH
Sbjct: 121 YATVQKHKDAINAAIVYDRDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+ A++TY MMSQ+ FTHA+PTLFNAGTPRPQLSSCFL+ MK+DSIEGIY+TLK CA
Sbjct: 181 DDLAGALETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHNIRAT SYIRG+NGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKYAGGIGLSVHNIRATDSYIRGSNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +L+LKKNHG E RARDLFY LW+PDLFM+RV+ NG WSL CPNE GLA
Sbjct: 301 LEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGSWSLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC GAEFE LY YE EG+A+K + AQ LWF IL SQ+ETGTPYML+KD CN KSNQ++L
Sbjct: 361 DCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQVETGTPYMLYKDACNGKSNQKHL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYT+P E AVCNLASI L V GS + F
Sbjct: 421 GTIKSSNLCTEIVEYTAPDEIAVCNLASINLTAHVE--------------GSGDAAT--F 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +VT+NLNK+IDVNYYPVE A+ SNL+HRPIGIGVQG+AD + L +ES
Sbjct: 465 DFAKLKRTAYVVTKNLNKVIDVNYYPVEEAKSSNLKHRPIGIGVQGMADALVKLRYPYES 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A+++NKD+FETIY+ A++ S ++A + GPY++Y SP S+G+ Q D+WNV PSDRWDW
Sbjct: 525 DDAKRINKDVFETIYFGAMEASIDLARELGPYDSYEGSPTSQGLFQFDLWNVKPSDRWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + ++G RNSLL+APMPTAST+QILGNNE FEP+TSN+Y+RRVL+GEF VVNK+L
Sbjct: 585 EGLRARLGEHGCRNSLLLAPMPTASTAQILGNNESFEPFTSNMYTRRVLAGEFAVVNKYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL G+W+ I+N+II D GSVQ + IP++LK +YKT WEIKQ ++DM+ DRG +
Sbjct: 645 LQDLIARGLWTSEIRNQIIADKGSVQGVAAIPDDLKALYKTTWEIKQKCVLDMSADRGAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLN+H+ PN K+TS+HF W +GLKTGMYYLR+R ADAI FTVD ++ +
Sbjct: 705 ICQSQSLNLHIADPNPGKLTSMHFYAWKKGLKTGMYYLRTRPKADAIAFTVDQAMAAKSR 764
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
L + + + EC++CG+
Sbjct: 765 GGAALKPANGQQEEE--------HECLSCGA 787
>gi|281204858|gb|EFA79053.1| ribonucleotide reductase large subunit [Polysphondylium pallidum
PN500]
Length = 868
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/786 (64%), Positives = 617/786 (78%), Gaps = 18/786 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKL---SYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLD 57
MYV+KRDG + +V +DKIT RL+ L L+ E DP V+QKV +GV+ GV T++LD
Sbjct: 21 MYVIKRDGTKASVQYDKITQRLQSLCDLEPKLNGEVIDPSEVTQKVASGVFPGVKTTELD 80
Query: 58 ELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIA 117
LAAETAA M+T HPDY LAARI+VSNLHK T SF ET++ ++ N ++G APL++
Sbjct: 81 NLAAETAAYMSTKHPDYGVLAARISVSNLHKQTSSSFLETVEKQHSFTNPKTGQPAPLVS 140
Query: 118 DDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIG 177
D++Y ++ + L+ I Y RDF+YD+FGFKTLERSYL ++ ++ERPQ MLMRVSIG
Sbjct: 141 DELYNLVKIHHKRLEEAIDYRRDFEYDFFGFKTLERSYLHRINDIIIERPQQMLMRVSIG 200
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH DDIDSAI+TY+++SQR FTHA+PTLFN+GTP PQ+SSCFLV MK+DSI+GIY+TLK+
Sbjct: 201 IHGDDIDSAIETYNLLSQRLFTHATPTLFNSGTPSPQMSSCFLVQMKEDSIDGIYDTLKQ 260
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG++VH IRA SYIRGTNGTSNG+VPMLRVFNDTARYVDQGGGKRKGAF
Sbjct: 261 CALISKSAGGIGIAVHKIRAARSYIRGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGAF 320
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWHADI EFL+L+KNHGKEE RARDLFYALWV DLFMERV+ + W+LFCPNEA
Sbjct: 321 AVYLEPWHADIVEFLDLRKNHGKEEMRARDLFYALWVSDLFMERVENDDVWNLFCPNEAP 380
Query: 358 GLADCWGAEFEKLYTHYER-EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSN 416
GLADCWG EF LY YE G +++ ++AQ+LWF I+ SQIETGTPY L+KD CN KSN
Sbjct: 381 GLADCWGDEFRALYEKYENTPGLSRRTIKAQDLWFTIIESQIETGTPYFLYKDACNSKSN 440
Query: 417 QQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSK 476
QQNLGTI+ SNLCTEII+YTS E AVCNLASIALP++VRE ++ +
Sbjct: 441 QQNLGTIQCSNLCTEIIQYTSADEVAVCNLASIALPKYVRE--------------NKETG 486
Query: 477 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
FD + L EVT +T NLNKIID NYYPV AR SN RHRPIGIG+QGLAD FI L +
Sbjct: 487 KPEFDHQYLFEVTKTITRNLNKIIDRNYYPVLEARNSNFRHRPIGIGIQGLADVFIRLRL 546
Query: 537 AFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD 596
FES A LNK+I ETIY+ AL S+E+A ++GPYE++ SP SKG LQ D WNV PS
Sbjct: 547 PFESNGAAILNKEIAETIYFAALTASAELAERDGPYESFKGSPASKGTLQQDFWNVTPSP 606
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
RWDW L+ I G+RNSLL+APMPTASTSQILGNNE FEPYTSNIYSRRVL+GEF VV
Sbjct: 607 RWDWTSLKQKIISTGLRNSLLIAPMPTASTSQILGNNEAFEPYTSNIYSRRVLAGEFTVV 666
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
NK LL DL ++ +W+P +KN+II GS+Q I +IP++LK +YKTVWEI+Q TL+DMA D
Sbjct: 667 NKQLLQDLMDLDLWTPEMKNQIIAHRGSIQNIEDIPDDLKELYKTVWEIRQRTLIDMAAD 726
Query: 717 RGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
RG +IDQSQS N+ + +P F+K+TS+HF W +GLKTGMYYLR+RAAADAI+FTVD ++
Sbjct: 727 RGAFIDQSQSFNVFIAEPTFQKLTSMHFYAWKKGLKTGMYYLRTRAAADAIQFTVDQTML 786
Query: 777 KEKPEK 782
K +K
Sbjct: 787 ANKEQK 792
>gi|405120842|gb|AFR95612.1| ribonucleoside-diphosphate reductase large chain [Cryptococcus
neoformans var. grubii H99]
Length = 863
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/777 (62%), Positives = 609/777 (78%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M++ KRDGR+E V FDK+TAR+ KLSYGL +P ++QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDPNFVEPAEITQKVVQGIHAGITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIA+SNLHK TKK FS + D++ N ++G +P+I DD+
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKVFSAVVHDLHAWVNPKTGKHSPMIDDDV 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M N LDS IIYDRDF Y+YFGFKTLERSYLL++ GK+VERPQHM+MRV++GIH
Sbjct: 123 YKVVMDNKDILDSAIIYDRDFAYNYFGFKTLERSYLLRINGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+ID I+TY++MS+R+FTHASPTLFNAGTPRPQ+SSCFLV MKDDSI+GIY+TLK CA
Sbjct: 183 SNIDKVIETYNLMSERYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGI+PMLR ++ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIIPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+F++L+KNHGKEE RARDLFYALW+ DLFM+RV+++G W+L CP E GLA
Sbjct: 303 LEPWHADVFDFIDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEKLY YER+GK +K ++AQ LWF IL +Q ETG PY+ +KD N KSNQ++L
Sbjct: 363 DVYGEEFEKLYESYERQGKGRKTIKAQKLWFAILEAQTETGVPYICYKDAANSKSNQKHL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EY+SP E AVCNLAS+ALP FV + R +
Sbjct: 423 GTIKSSNLCTEIMEYSSPDEVAVCNLASLALPAFV------------------DLERRVY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+T +VT+NL+ +I NYYPV AR SN+RHRP+G+GVQGLAD F+ L M F+S
Sbjct: 465 DFKKLHEITKVVTKNLDTVITRNYYPVPEARNSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ AL+ S E+A + G YE+Y SP+SKGILQ DMW +P+D WDW
Sbjct: 525 AEARELNIQIFETIYHAALEASCELAEEFGTYESYEGSPISKGILQYDMWGRVPTDLWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++NGVRNSLLVAPMPTASTSQILG NECFEPYTS +Y+RRVLSG+F VV L
Sbjct: 585 TELKAKIAQNGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + +W +K II GS+Q IP IP++LK IY+TVWEI Q ++D+A DRG +
Sbjct: 645 LRDLINLDLWDDNMKQLIIAAGGSIQSIPNIPDDLKKIYRTVWEISQKAVIDLAADRGAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ P+F ++TS+HF W RGLKTG YYLR+R +A+AI+FTVD S K
Sbjct: 705 IDQSQSLNIHLSNPSFPQLTSMHFYGWKRGLKTGCYYLRTRPSANAIQFTVDASTLK 761
>gi|403418237|emb|CCM04937.1| predicted protein [Fibroporia radiculosa]
Length = 958
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/740 (66%), Positives = 596/740 (80%), Gaps = 20/740 (2%)
Query: 39 VSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI 98
++QKV AGVY+GVTT +LD LAAETAA +TT HPDYA LAARIAVSNLHK TKK+FS I
Sbjct: 117 ITQKVIAGVYQGVTTVELDNLAAETAAYLTTKHPDYAILAARIAVSNLHKETKKNFSAVI 176
Query: 99 KDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
D+YN+ N ++G A +I+ Y+++M NA LDS IIYDRDF+Y++FGFKTLERSYLLK
Sbjct: 177 SDLYNYVNPKNGRPAGMISKQTYDVVMANAETLDSAIIYDRDFNYNFFGFKTLERSYLLK 236
Query: 159 VQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSC 218
+ G+ ERPQH+LMRV++GIH DI ++TYH+MS+R+FTHASPTLFNAGTP QLSSC
Sbjct: 237 LNGRTAERPQHLLMRVAVGIHGSDITRVLETYHLMSERFFTHASPTLFNAGTPNAQLSSC 296
Query: 219 FLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FLVCMKDDSIEGIY+TLK CA+ISK+AGGIG+S+HNIRATGSYI GTNG SNGIVPMLR
Sbjct: 297 FLVCMKDDSIEGIYDTLKNCAMISKTAGGIGLSIHNIRATGSYIAGTNGYSNGIVPMLRA 356
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLF 338
++ TARYVDQGG KR GAFA+YLEPWH DIFEFL+L+KNHGKEE RARDLFYALW+PDLF
Sbjct: 357 YDATARYVDQGGNKRPGAFAIYLEPWHDDIFEFLDLRKNHGKEEVRARDLFYALWIPDLF 416
Query: 339 MERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQI 398
M+RV+ NG+WSLFCPNEA GL + WGAEFE LY YE EG+A++ + AQ LW+ IL +QI
Sbjct: 417 MKRVEANGKWSLFCPNEAPGLHEVWGAEFETLYERYESEGRARRTIDAQKLWYAILDAQI 476
Query: 399 ETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK 458
ETG P+ML+KD CN KSNQ++LGTIKSSNLCTEI+EY+SP ETAVCNLAS+AL
Sbjct: 477 ETGNPFMLYKDACNAKSNQRHLGTIKSSNLCTEIVEYSSPDETAVCNLASVAL------- 529
Query: 459 DVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHR 518
PS I G R ++F++L +V +VT NLN+II+VNYYPV ARRSN+RHR
Sbjct: 530 -------PSCIEGGR------YNFQRLHDVAKVVTFNLNRIIEVNYYPVPEARRSNMRHR 576
Query: 519 PIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNS 578
PIG+GV GLAD F+ L M F+SPEA++LNK IFETIY+ AL+ S EIAA +GPYETY S
Sbjct: 577 PIGVGVNGLADAFMALRMPFDSPEARELNKQIFETIYHAALEASCEIAAVDGPYETYEGS 636
Query: 579 PVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P S+G LQ DMW V PSD WDW L+D I+K+G+RNSLLVAPMPTASTSQILG NECFEP
Sbjct: 637 PASRGELQYDMWGVTPSDLWDWASLKDKIAKHGLRNSLLVAPMPTASTSQILGYNECFEP 696
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
YTSNIY+RRVL+GEF +V LL +L + +W +KN+II ++GSVQ I IP+++K I
Sbjct: 697 YTSNIYTRRVLAGEFQIVCPWLLRELVDRKLWDDEMKNQIIANNGSVQNISGIPDDIKAI 756
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
YKTVWEI Q ++DMA DRG +I QSQSLN+H+ P ++TS+HF W +GLKTGMYYL
Sbjct: 757 YKTVWEISQKKVLDMAADRGAFICQSQSLNVHLQSPTTPQLTSMHFYGWKKGLKTGMYYL 816
Query: 759 RSRAAADAIKFTVDTSVFKE 778
R+R AA AI+FTVD + K+
Sbjct: 817 RTRPAAQAIQFTVDQGMLKK 836
>gi|401839256|gb|EJT42552.1| RNR3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 866
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/775 (62%), Positives = 614/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAAR+A+SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARVAISNLHKQTTKQFSKVIEDLHDWVNPATGKLAPMISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFKYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSSAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YEREG+ K + AQ LW+ IL SQ ETGTP+M++KD CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRGKTIT-AQKLWYAILQSQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV V G K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFVE-------------VAEDG-KTATY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+ L ++ ++T NLN++ID NYYPV AR SN+RHRPI +GVQGLADT+++L + FE
Sbjct: 466 NFQSLHDIAKVITHNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMMLRLPFEC 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 526 DEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPSSKGILQFDMWNAKPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLKKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS++ +P +P++LK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIKDLPNVPQDLKELYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQSPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQDV 760
>gi|365760174|gb|EHN01914.1| Rnr3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 870
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/775 (62%), Positives = 614/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAAR+A+SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARVAISNLHKQTTKQFSKVIEDLHDWVNPATGKLAPMISDEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFKYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSSAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YEREG+ K + AQ LW+ IL SQ ETGTP+M++KD CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRGKTIT-AQKLWYAILQSQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+SP ETAVCNLASIALP FV V G K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFVE-------------VAEDG-KTATY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+ L ++ ++T NLN++ID NYYPV AR SN+RHRPI +GVQGLADT+++L + FE
Sbjct: 466 NFQSLHDIAKVITHNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMMLRLPFEC 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P WDW
Sbjct: 526 DEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPSSKGILQFDMWNAKPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLKKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS++ +P +P++LK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIKDLPNVPQDLKELYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQSPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQDV 760
>gi|442750421|gb|JAA67370.1| Putative ribonucleotide reductase alpha subunit [Ixodes ricinus]
Length = 762
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/772 (65%), Positives = 623/772 (80%), Gaps = 21/772 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR++ V+FDKITAR++KL YGL+ + D +++KV G+Y+GVTT +LD LA
Sbjct: 1 MFVVKRDGRRQTVYFDKITARIQKLCYGLNQDFVDSCSIAKKVINGLYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK TKKSFSE I ++Y+ NE + L P+I ++I
Sbjct: 61 AETAATMTTKHPDYALLAARIAVSNLHKETKKSFSEVISNLYHMINESNNLHTPMIDEEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M+NA +S I+YDRDF+Y+YFGFKTLER+YLL++ GKVVERPQHMLMRVSIGIH
Sbjct: 121 YKIVMENADTFNSAIVYDRDFNYNYFGFKTLERAYLLRINGKVVERPQHMLMRVSIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+ + ++TY++MS++WFTHASPTLFN+GTPRPQLSSCFL+ MK DSIEGIY+TLK+CA+
Sbjct: 181 NDLKNVLETYNLMSEKWFTHASPTLFNSGTPRPQLSSCFLLQMKSDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VHNIRA GSYI G+NG S+GIVPMLRV+N+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKSAGGIGLNVHNIRAAGSYIAGSNGKSSGIVPMLRVYNNTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+FL+LKKN GKEE+RARDLFYALW+PDLFMERV+ N WSL CPN+ GL
Sbjct: 301 LEPWHADVFDFLDLKKNTGKEENRARDLFYALWIPDLFMERVEKNETWSLMCPNDCPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +FE+LYT YE E + + V AQ LW+ I+ SQ ETGTPYML+KD CN KSNQ+N+
Sbjct: 361 DVYGKKFEQLYTKYESEKRYIRQVPAQKLWYAIVESQTETGTPYMLYKDACNEKSNQKNI 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL RFVR N F
Sbjct: 421 GTIKCSNLCTEIVEYTSDKEVAVCNLASIALNRFVR--------------------NGHF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFE+L V+ I+T NLN+II+ N+YP+ A+ SN+RHRPIGIGVQGLADTFILL + F+S
Sbjct: 461 DFEQLRRVSRIITVNLNRIIERNFYPIPEAKLSNMRHRPIGIGVQGLADTFILLRLPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN+ IFETIYY AL+ S E+A GPYETY SPVSKG+LQ DMW V P++ WDW
Sbjct: 521 EEARLLNRQIFETIYYGALEQSCELAKNLGPYETYPGSPVSKGLLQYDMWGVKPTEMWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLLVAPMPTAST+QILGNNE EPYT+N+Y+RRVLSGEF VVN HL
Sbjct: 581 TSLKKQIVKYGVRNSLLVAPMPTASTAQILGNNESIEPYTTNVYTRRVLSGEFQVVNYHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT+ G+W+ +KN +I + GSVQK+ IP++LK +Y+TVWEI Q +++MA DRG +
Sbjct: 641 LKDLTDRGLWNDELKNALIANHGSVQKL-NIPDDLKHLYRTVWEIPQKHILEMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQSLNIH+ QP + K+TS+HF W GLKTGMYYLR++ AA+AI+FTVD
Sbjct: 700 IDQSQSLNIHIAQPTYSKITSMHFFGWKLGLKTGMYYLRTKPAANAIQFTVD 751
>gi|444324020|ref|XP_004182650.1| hypothetical protein TBLA_0J01350 [Tetrapisispora blattae CBS 6284]
gi|387515698|emb|CCH63131.1| hypothetical protein TBLA_0J01350 [Tetrapisispora blattae CBS 6284]
Length = 886
Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/775 (62%), Positives = 617/775 (79%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL + H DPV V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVCKRDGRKEPVRFDKITARVSRLCYGLDSNHIDPVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAAR+A+SNLHK T K FS I+ +YN+ N + APLIA D+
Sbjct: 61 AETAAYMTTVHPDYAILAARLAISNLHKQTTKVFSNLIEQLYNYVNPSNNQPAPLIAKDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M N ++S I+YDRDF ++YFG+KTLERSYLL++ G+V ERPQH++MRV +GIH
Sbjct: 121 YETVMANRDEINSAIVYDRDFQFNYFGYKTLERSYLLRMNGQVAERPQHLIMRVCLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI +A+++Y++MS R+FTHA+PTLFN+GTPRPQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 SDIKAALESYNLMSHRYFTHATPTLFNSGTPRPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RV+N+TARYVDQGG KR GA A++
Sbjct: 241 ISKSAGGIGIHMHNIRSTGSYIAGTNGTSNGLIPMIRVYNNTARYVDQGGNKRPGAIAIF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+EA GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVKENGDWTLFSPSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY Y EGK +K ++AQ LW+ IL +Q ETGTP++ +KD N+KSNQ+NL
Sbjct: 361 DVYGDEFEALYNRYVEEGKGRKTIKAQKLWYSILEAQTETGTPFICYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EIIEY++P ETAVCNLAS+ALP F+ + G+ + +
Sbjct: 421 GTIKSSNLCCEIIEYSAPDETAVCNLASVALPAFIE-------------TAADGT-TQTY 466
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL +V ++T NLNK+ID +YYPV AR SN+RHRPI +G+QGLADT+ LL + FES
Sbjct: 467 NFQKLHDVCKVITRNLNKVIDRSYYPVPEARNSNMRHRPIALGIQGLADTYQLLRIPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A++LN IFET+Y+ +L+ S E+A +GPY +Y SPVS+GILQ DMWNV P+D WDW
Sbjct: 527 DRAKELNIHIFETLYHASLEASCELAEVDGPYSSYEGSPVSQGILQYDMWNVKPTDLWDW 586
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+GVRNSL++APMPTASTSQILG NECFEP+TSN+YSRR LSGEF VVN +L
Sbjct: 587 DSLKAKIKKHGVRNSLVLAPMPTASTSQILGYNECFEPFTSNMYSRRTLSGEFQVVNPYL 646
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++G+W +K +I D+GS+Q +P IP+ELK +YKTVWEI Q ++D+A DR +
Sbjct: 647 LRDLVDLGVWDDAMKQHLITDNGSIQNLPNIPQELKELYKTVWEISQKKIIDLAADRSAF 706
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 707 IDQSHSLNIHIQAPTMGKLTSMHFYGWQKGLKTGMYYLRTQAASAAIQFTIDKKV 761
>gi|340715220|ref|XP_003396116.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Bombus terrestris]
Length = 821
Score = 1059 bits (2739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/833 (62%), Positives = 632/833 (75%), Gaps = 40/833 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E VHFDKIT+R++KL Y L ++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRIQKLCYNLDMDYVDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIA+SNLHK TKKSFSE I +YN + P+I +
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETKKSFSEVIHSLYNVKEHYTNEVRPVINEKY 126
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y II NA L+S IIYDRDF Y+YFGFKTLERSYLLK+QGKVVERPQHMLMRV++ IH
Sbjct: 127 YNIIQNNANKLNSAIIYDRDFSYNYFGFKTLERSYLLKIQGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID AI+TY+ +S+R+FTHASP+LF A T + Q+SSCFL+ M DDSI+GIY+TLK CA+
Sbjct: 187 EDIDKAIETYNFLSERYFTHASPSLFFACTRQQQMSSCFLLTMSDDSIDGIYDTLKRCAL 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GT G SNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 306
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LKKN GKEE+RAR+LFYALW+PDLFM+RV NG WSL CP+E+ GL
Sbjct: 307 LEPWHADIFEFLDLKKNIGKEENRARELFYALWIPDLFMKRVLDNGVWSLMCPHESPGLP 366
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LYT YE E + K+ +QA++LW IL SQ+ETGTPYML+KD CNRKSN QNL
Sbjct: 367 DVWGDEFEALYTRYETEKRYKRQIQARDLWTAILISQVETGTPYMLYKDHCNRKSNHQNL 426
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI++Y+SP E AVCNLASIA+ FV S N+ F
Sbjct: 427 GTIKSSNLCTEIVQYSSPDEIAVCNLASIAVNMFV------------------NSSNQTF 468
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL +VT IVT NL+KIIDVNYYPV A+ SN +HRPIGIG+QGLAD F+L+ FES
Sbjct: 469 DFEKLRKVTKIVTCNLDKIIDVNYYPVPEAKTSNFKHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN IFET+YY AL+ S E+AA++G YETY SPVSKGILQ DMWNV P+D W+W
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAAEKGTYETYEGSPVSKGILQYDMWNVTPTDLWNW 588
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 589 TILKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYARRVLSGEFQVVNPHL 648
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE +W +KN+II ++GSVQ I IP +LKM+YKTVWEI Q ++ MA DRG +
Sbjct: 649 LRDLTERDLWDENMKNEIIANNGSVQNIERIPNDLKMLYKTVWEIPQKIILKMAADRGAF 708
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQS+N+HM +P +K+TS+HF W GLKTGMYYLR++ A +A++FTVD S +
Sbjct: 709 IDQSQSMNVHMAKPTAEKLTSMHFYGWKMGLKTGMYYLRTKPAVNALQFTVDKSKLQNTI 768
Query: 779 ----------KPEKPELVVDDETKMAQ----------VVCSLTNREECMACGS 811
+ E + E K Q CS N + CMACGS
Sbjct: 769 STTSNQSVNSECNNDEELNSTENKWLQNQSSENIEAVFACSRENGDACMACGS 821
>gi|221059988|ref|XP_002260639.1| ribonucleoside-diphosphate reductase, large subunit [Plasmodium
knowlesi strain H]
gi|193810713|emb|CAQ42611.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Plasmodium knowlesi strain H]
Length = 848
Score = 1059 bits (2739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/825 (61%), Positives = 625/825 (75%), Gaps = 36/825 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI NLHKNT +E + +Y Y + G A LI+ ++
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIAEVAEALY-MYKDVRGRPASLISKEV 159
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ ++++ L+ EI Y RDF+YDYFGFKTLERSYLL++ GK++ERPQH+LMRVSIGIH
Sbjct: 160 YDFMIQHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINGKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ A++TYH+MSQ++FTHA+PTLFN+GTPRPQ+SSCFL+CMK DSIEGI+ETLK+CA+
Sbjct: 220 GDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLCMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+L+KNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENQNWTLMCPNECPGLS 399
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WGAEFEKLY YE EG KK V AQ+LWF IL SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 400 ESWGAEFEKLYLKYEEEGMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 459
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC EIIEYTSP E AVCNLASIAL +FV DV R F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV---DV---------------DKREF 501
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+T I+T NL++II+ NYYPV+ A RSN RHRPIGIGVQGLADTF+LL +ES
Sbjct: 502 NFKKLYEITKIITRNLDQIIERNYYPVQEAERSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
A++LNK IFET+YY AL+ S E+A GPYETY SP S+GILQ DMWNV + + WD
Sbjct: 562 DSAKELNKRIFETMYYAALEMSMELAQIYGPYETYQGSPASQGILQFDMWNVKVDNKYWD 621
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDKLKEKIKKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL + G+W +K ++I +GSVQ I EIP +LK +YKTVWEIKQ ++DMA DRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPNDLKELYKTVWEIKQKNIIDMAADRGA 741
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+IDQSQSLNI++ +P F K++S+HF W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 780 PEKP-------------ELVVDDETKMAQVVCSL--TNREECMAC 809
+ E + + T VVC L ++C+ C
Sbjct: 802 AKMKNEEGVAITREVSRETISTESTVTQNVVCPLRRNKDDQCLMC 846
>gi|47225021|emb|CAF97436.1| unnamed protein product [Tetraodon nigroviridis]
Length = 846
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/749 (66%), Positives = 601/749 (80%), Gaps = 19/749 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNADFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A +TT HPDYA LAARIAVSNLHK TKK FSE ++D+YN+ N + +P+++ +
Sbjct: 61 AEISATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNRCHSPMVSKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+++N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH+
Sbjct: 121 LDIVLQNRDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 NDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGHSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL LKKN GKEE RARDLFYALW+PDLFM+RV++N WSL CP+E GL
Sbjct: 301 LEPWHFDVFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVESNQDWSLMCPDECPGLN 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFEKLYT YE+EG+ K+VV+AQ +W I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYTSYEKEGRVKRVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLASIAL +V + F
Sbjct: 421 GTIKSSNLCTEIVEYTSSDEVAVCNLASIALNMYVTPECT-------------------F 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KLA VT +V NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFHKLAAVTKVVVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LN IFETIYY AL+ S ++AA+ GPYE+Y SPVSKG+LQ DMW P++ WDW
Sbjct: 522 PEAQLLNTQIFETIYYAALEASCQLAAELGPYESYEGSPVSKGVLQYDMWGKTPTELWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+++GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 QQLKERIARHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN++I +GSVQ I IP ++K +YKTVWEI Q T++ MA DRG +
Sbjct: 642 LKDLTERGLWNEDMKNQLIAHNGSVQNIDGIPNDVKQLYKTVWEISQKTVIKMAADRGAF 701
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSR 749
IDQSQS+NIH+ +PN+ K+TS+HF W +
Sbjct: 702 IDQSQSMNIHIAEPNYGKLTSMHFYGWKQ 730
>gi|321259241|ref|XP_003194341.1| ribonucleoside-diphosphate reductase large chain [Cryptococcus
gattii WM276]
gi|317460812|gb|ADV22554.1| ribonucleoside-diphosphate reductase large chain, putative
[Cryptococcus gattii WM276]
Length = 863
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/777 (62%), Positives = 611/777 (78%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M++ KRDGR+E V FDK+TAR+ KLSYGL +P ++QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDPNFVEPAEITQKVVQGIHAGITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIA+SNLHK TKK FS + D++ N ++G +P+I D++
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKVFSAVVHDLHAWVNPKTGKHSPMIDDEV 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++M N LDS IIYDRDF Y+YFGFKTLERSYLL++ GK+VERPQHM+MRV++GIH
Sbjct: 123 YKVVMDNKDILDSAIIYDRDFAYNYFGFKTLERSYLLRINGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+ID I+TY++MS+R+FTHASPTLFNAGTPRPQ+SSCFLV MKDDSI+GIY+TLK CA
Sbjct: 183 ANIDKVIETYNLMSERYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGI+PMLR ++ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIIPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+F+F++L+KNHGKEE RARDLFYALW+PDLFM+RV+++G W+L CP E GLA
Sbjct: 303 LEPWHADVFDFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEKLY YER+GK +K ++AQ LWF IL +Q ETG PY+ +KD N KSNQ++L
Sbjct: 363 DVYGEEFEKLYESYERQGKGRKTIKAQKLWFAILEAQTETGVPYICYKDAANSKSNQKHL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EY+SP E AVCNLAS+ALP FV + R +
Sbjct: 423 GTIKSSNLCTEIMEYSSPDEVAVCNLASLALPAFV------------------DLERRVY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+T +VT+NL+ +I NYYPV AR SN+RHRP+G+GVQGLAD F+ L M F+S
Sbjct: 465 DFKKLHEITKVVTKNLDTVITRNYYPVPEARNSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ AL+ S E+A ++G YE+Y SP+SKGILQ DMW +P+D WDW
Sbjct: 525 LEARELNIQIFETIYHAALEASCELAEEQGTYESYEGSPLSKGILQYDMWGRVPTDLWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y+RRVLSG+F VV L
Sbjct: 585 TELKAKIAQHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL + +W +K II GS+Q IP IP++LK IY+TVWEI Q ++D+A DRG +
Sbjct: 645 LRDLINLDLWDDNMKQLIIAAGGSIQSIPNIPDDLKKIYRTVWEISQKAVIDLAADRGAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNIH+ P+F ++TS+HF W RGLKTG YYLR+R +A+AI+FT+D S K
Sbjct: 705 IDQSQSLNIHLSNPSFPQLTSMHFYGWKRGLKTGCYYLRTRPSANAIQFTIDASTLK 761
>gi|291244082|ref|XP_002741928.1| PREDICTED: ribonucleoside-diphosphate reductase M1 chain-like,
partial [Saccoglossus kowalevskii]
Length = 759
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/776 (64%), Positives = 611/776 (78%), Gaps = 22/776 (2%)
Query: 39 VSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI 98
++ +V GVY GVTT +LD LAAETAA+MTT HPDYA LAARIAVSNLHK TKK+FS +
Sbjct: 3 ITMRVITGVYPGVTTVELDTLAAETAASMTTKHPDYAVLAARIAVSNLHKETKKTFSAVM 62
Query: 99 KDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
D++N+ N R+ +P+I+ I++II NA L+S IIYDRDF+Y++FGFKTLERSYLLK
Sbjct: 63 DDLFNYVNPRNNKPSPMISTKIHDIITNNAERLNSAIIYDRDFNYNFFGFKTLERSYLLK 122
Query: 159 VQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSC 218
+ GKV ERPQHMLMRVS+GIH +DI+ AI+TY+++S++WFTHASPTLFNAGT RPQLSSC
Sbjct: 123 INGKVAERPQHMLMRVSVGIHHNDIEGAIETYNLLSEKWFTHASPTLFNAGTCRPQLSSC 182
Query: 219 FLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+VH IRA+GSYI GTNG+SNG++PMLRV
Sbjct: 183 FLLTMKDDSIEGIYDTLKQCALISKSAGGIGVNVHCIRASGSYIAGTNGSSNGLLPMLRV 242
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLF 338
+N+TARYVDQGG KR GAFA+YLEPWHADIF+FL+ KKN GKEE RARDLFYALW+PDLF
Sbjct: 243 YNNTARYVDQGGNKRPGAFAIYLEPWHADIFDFLDAKKNTGKEEQRARDLFYALWIPDLF 302
Query: 339 MERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQI 398
M+RV+TN W+L CPNE GL D WG EFE LY YERE K K ++AQ LW+ I+ +Q
Sbjct: 303 MKRVETNQDWTLMCPNECPGLHDVWGKEFEDLYEKYERENKGTKTIKAQLLWYAIIEAQT 362
Query: 399 ETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK 458
ETGTPYML+KD CNRKSN QNLGTIK SNLCTEI+E++SP E AVCNLASIA+ FV+
Sbjct: 363 ETGTPYMLYKDACNRKSNHQNLGTIKCSNLCTEIVEFSSPDEVAVCNLASIAVNMFVK-- 420
Query: 459 DVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHR 518
++ +DF+KL +VT ++ NLNKIIDVN+YPVE AR SN+RHR
Sbjct: 421 -----------------PDKTYDFKKLEQVTGVIVRNLNKIIDVNFYPVEEARNSNMRHR 463
Query: 519 PIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYH-- 576
PIGIGVQGLAD FIL+ F+S EA LNK IFETIYY ALK S E+A ++G YE+Y
Sbjct: 464 PIGIGVQGLADAFILMRFPFDSDEAMLLNKQIFETIYYGALKASCELAERDGAYESYKFG 523
Query: 577 -NSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
PVSKGILQ DMW+V P+D DW L+ I+ +G+RNSLL+APMPTAST+QILGNNE
Sbjct: 524 DGCPVSKGILQYDMWDVTPTDLHDWDALKKDIATHGLRNSLLLAPMPTASTAQILGNNES 583
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EPYT+NIYSRRVLSGEF VVN HLL DLTEMG+W+ +KN +I ++GS+Q I IP+ +
Sbjct: 584 VEPYTTNIYSRRVLSGEFQVVNHHLLKDLTEMGLWNDDMKNLLIANNGSIQSIDGIPDHI 643
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
K +Y+TVWEI Q ++ MA DRG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGM
Sbjct: 644 KKLYRTVWEISQKNILIMAADRGAFIDQSQSLNIHIAEPNYGKLTSMHFFAWKQGLKTGM 703
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
YYLR+R AAD IKFTV+ + K +E A +VCSL N+++C+ CGS
Sbjct: 704 YYLRTRPAADPIKFTVNKTSLKPTTNVEAAAEKEEENQAAMVCSLQNKDDCLMCGS 759
>gi|149248790|ref|XP_001528782.1| ribonucleoside-diphosphate reductase large chain 1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448736|gb|EDK43124.1| ribonucleoside-diphosphate reductase large chain 1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 881
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/778 (63%), Positives = 624/778 (80%), Gaps = 16/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+++L YGL H +PV ++QKV AGVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDPTHVEPVAITQKVIAGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIAVSNLHK T K +S K +Y + N + L +P+I+ +
Sbjct: 61 AETAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSAVSKILYEYINPETKLHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II ++ L+S I+YDRDF+Y+YFGFKTLERSYLL+V GKV ERPQH++MRV+IGIH
Sbjct: 121 YDIIQEHEDELNSAIVYDRDFNYNYFGFKTLERSYLLRVNGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI I+TY++MSQR+FTH SP LFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLK CA+
Sbjct: 181 RDIPRVIETYNLMSQRYFTHGSPCLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIFEF+ ++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GLA
Sbjct: 301 LEPWHSDIFEFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY Y EG+ ++ ++AQ LW+ IL Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DCYGEEFEELYNKYVAEGRGRQTIKAQKLWYSILECQTETGTPFMLYKDACNAKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP E AVCNLASIALP F+ + + + ++
Sbjct: 421 GMIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFIEQDENKI----------------WY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL +VT +VT NLN++ID NYYPV A +SN+RHRPI +GVQGLAD F++L +AF+S
Sbjct: 465 NFEKLHDVTKVVTRNLNRVIDRNYYPVPEAEKSNMRHRPIALGVQGLADAFMVLRIAFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFETIY+ A++ S E+A +EG YETY SP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAQEEGAYETYQGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DELKAKLAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW+ +K+ II ++GS+Q +P IP+E+K +YKTVWEI Q ++DMA DR +
Sbjct: 645 LRDLVDLGIWNDAMKSSIISNNGSIQALPNIPDEIKALYKTVWEISQKHIIDMASDRAAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
IDQSQSLNIH+ P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D + ++
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKIAEQ 762
>gi|389585613|dbj|GAB68343.1| ribonucleoside-diphosphate reductase large chain [Plasmodium
cynomolgi strain B]
Length = 837
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/825 (61%), Positives = 624/825 (75%), Gaps = 36/825 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 31 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 89
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI NLHKNT E + +Y Y + G A LI+ ++
Sbjct: 90 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIGEVAEALY-MYKDVRGRPASLISKEV 148
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE ++++ L+ EI Y RDF+YDYFGFKTLERSYLL++ GK++ERPQH+LMRVSIGIH
Sbjct: 149 YEFMIQHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINGKIIERPQHLLMRVSIGIHI 208
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ A++TYH+MSQ++FTHA+PTLFN+GTPRPQ+SSCFL+CMK DSIEGI+ETLK+CA+
Sbjct: 209 GDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLCMKSDSIEGIFETLKQCAL 268
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 269 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 328
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+L+KNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE GL+
Sbjct: 329 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 388
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLYT YE E KK V AQ+LWF IL SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 389 ESWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 448
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC EIIEYTSP E AVCNLASIAL +FV DV + R F
Sbjct: 449 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV---DV---------------EKREF 490
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+T I+T NL++II+ NYYPV+ A RSN RHRPIGIGVQGLADTF+LL +ES
Sbjct: 491 NFKKLYEITKIITRNLDQIIERNYYPVQEAERSNKRHRPIGIGVQGLADTFMLLRYPYES 550
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
A++LNK IFET+YY AL+ S E+A GPYETY SP S+GILQ DMWNV + + W+
Sbjct: 551 DSAKELNKRIFETMYYAALEMSMELAQIYGPYETYQGSPASQGILQFDMWNVKVDNKYWN 610
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 611 WDELKAKIKKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 670
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL + G+W +K ++I +GSVQ I EIP +LK +YKTVWEIKQ ++DMA DRG
Sbjct: 671 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPSDLKELYKTVWEIKQKNIIDMAADRGA 730
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+IDQSQSLNI++ +P F K++S+HF W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 731 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 790
Query: 780 PEKP-------------ELVVDDETKMAQVVCSL--TNREECMAC 809
+ E + + T VVC L N ++C+ C
Sbjct: 791 AKMKNAEGVAITREVSRETISTESTVTQNVVCPLRRNNDDQCLMC 835
>gi|365981623|ref|XP_003667645.1| hypothetical protein NDAI_0A02440 [Naumovozyma dairenensis CBS 421]
gi|343766411|emb|CCD22402.1| hypothetical protein NDAI_0A02440 [Naumovozyma dairenensis CBS 421]
Length = 852
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/775 (62%), Positives = 612/775 (78%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E V FDKITAR+ +L YGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MFVIKRDGRKEPVQFDKITARISRLCYGLDPNRVDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAAR+A+SNLHK T K FS+ I D++++ N +G+ +P+I+ +
Sbjct: 61 AETCAYMTTVHPDYATLAARLAISNLHKQTTKRFSQVIYDLHHYVNPLNGIPSPMISKKV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M N LDS I+YDRDF ++YFGFKTLERSYLLK+ GKV ERPQH++MRV++GIH
Sbjct: 121 YDIVMANKDLLDSSIVYDRDFSFNYFGFKTLERSYLLKLDGKVAERPQHLIMRVALGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++S +KTY++MS R+F HASPTLFNAGTPRPQ+SSCFL+ MK+DSI+GI+ETLKECA+
Sbjct: 181 DDMESVLKTYNLMSMRYFIHASPTLFNAGTPRPQMSSCFLLAMKEDSIDGIFETLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HN+RATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNVRATGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F+ ++KNHGKEE RARDLF ALW+PDLFM+RV+ NGQW+LF P++A GL
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGQWTLFSPSDAPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF +LY YEREG K ++AQ LW+ IL +Q ETGTP++++KD CN K+NQ+NL
Sbjct: 361 DVYGNEFVELYERYEREGLG-KTIKAQKLWYAILEAQTETGTPFIIYKDACNEKTNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+E++SP ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEWSSPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL E++ +VT NLN++ID NYYPV A RSN+RHRPI +GVQGLADT++LL + FES
Sbjct: 466 NFEKLHEISKVVTYNLNRVIDNNYYPVPEAERSNVRHRPIALGVQGLADTYMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A LNK IFET+Y+ +L+ S E+A K+GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EGASLLNKQIFETMYHASLEASCELAQKDGPYETFQGSPASEGILQMDMWDQEPLGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKYGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K II ++GS+Q +P +P ELK +YKTVWEI Q ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQHIITENGSIQNLPNVPAELKALYKTVWEISQKKIIDMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D +V
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQAV 760
>gi|422294256|gb|EKU21556.1| ribonucleoside-diphosphate reductase subunit M1 [Nannochloropsis
gaditana CCMP526]
Length = 974
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/793 (61%), Positives = 622/793 (78%), Gaps = 11/793 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR+E V FDKIT RL+ L GL+T++ DP V+QKV G+Y GV+T++LD LA
Sbjct: 130 MHVVKRDGRREPVAFDKITKRLRSLCKGLNTDYVDPGRVAQKVVQGMYNGVSTAELDNLA 189
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA + +HPDYA LAAR++VSNLHK T SFS+T++ +Y+H + +G A I++++
Sbjct: 190 AETAAYLNIDHPDYARLAARVSVSNLHKETNPSFSQTMRQLYDHVDPATGHAAGFISEEV 249
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++ + LD+ + ++RD+ +DYFGFKT+ER+YLLK+ KVVERPQ+ML+RV++GIH
Sbjct: 250 MALVAAHGPTLDAAVRHERDYFFDYFGFKTMERAYLLKIGRKVVERPQYMLLRVALGIHG 309
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+ +A++TY +MS +WF HASPTLF+AGT PQ+SSCFL+ M+ DSI GIY+TLK+CAV
Sbjct: 310 EDLPAALETYELMSNKWFIHASPTLFHAGTRFPQMSSCFLLAMQADSIVGIYDTLKQCAV 369
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+SVHNIRA G+YI+GT GTSNG+VPMLRVF+ TARYVDQGGGKR GAFA+Y
Sbjct: 370 ISKAAGGIGLSVHNIRAHGAYIKGTKGTSNGLVPMLRVFDVTARYVDQGGGKRPGAFAIY 429
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFE L+L+KNHGKEE RARDLFY LW+PDLFMERV+ + WSL CP++ GLA
Sbjct: 430 LEPWHADIFEVLDLRKNHGKEEARARDLFYGLWIPDLFMERVEEDRTWSLMCPDQCPGLA 489
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC G F LY YEREG+ KK V+AQ+LWF IL SQIETGTPYML+KD CN KSNQQNL
Sbjct: 490 DCHGQAFRDLYLKYEREGRVKKTVRAQDLWFAILDSQIETGTPYMLYKDACNLKSNQQNL 549
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK----------DVPVESHPSRIV 470
GTIKSSNLCTEI++YTS E AVCNLAS+ LP+FV +K + + +
Sbjct: 550 GTIKSSNLCTEIVQYTSAEEVAVCNLASVVLPKFVVQKAGTGGKDDGQAADLTAQRGKRP 609
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
GS+ + FD + L VT +V NLNK+ID N YPV A RSN RHRPIG+GVQGLADT
Sbjct: 610 GSKSRQELTFDHQALYNVTKVVVRNLNKVIDRNLYPVPEAERSNRRHRPIGLGVQGLADT 669
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW 590
FI L + F+SPEA+Q N++IFET+Y+ A + S E+A KEGPYE+Y SP S+G LQ D+W
Sbjct: 670 FIKLRLPFDSPEARQTNQEIFETMYFAASEASMELAKKEGPYESYPGSPASQGKLQFDLW 729
Query: 591 NVIP-SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
V P S RWDW L+ I+++G+RNSLL+APMPTAST+QILG NEC EPYTSN+Y+RRV
Sbjct: 730 GVTPQSGRWDWAGLKKEIAQHGLRNSLLLAPMPTASTAQILGYNECIEPYTSNLYARRVK 789
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF+VVN HLL DLT G+W+P ++N ++ + GSVQ IP +P+E+K IY+TVWEIKQ +
Sbjct: 790 AGEFIVVNPHLLEDLTAQGLWTPAVRNALVAEGGSVQNIPGLPQEMKEIYRTVWEIKQKS 849
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
L+DMA DRG YIDQSQSLN M +P++ ++TS+HF W RGLKTGMYYLR++ AA+AI+F
Sbjct: 850 LIDMAADRGAYIDQSQSLNAFMAEPDYSRLTSMHFYGWKRGLKTGMYYLRTKPAANAIQF 909
Query: 770 TVDTSVFKEKPEK 782
TVD+ +K K
Sbjct: 910 TVDSQPVLKKRRK 922
>gi|89890042|ref|ZP_01201553.1| ribonucleoside-diphosphate reductase large chain [Flavobacteria
bacterium BBFL7]
gi|89518315|gb|EAS20971.1| ribonucleoside-diphosphate reductase large chain [Flavobacteria
bacterium BBFL7]
Length = 828
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/786 (63%), Positives = 625/786 (79%), Gaps = 24/786 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDG +E V FDKITAR++KL YGLS H DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGHKEPVMFDKITARVRKLCYGLSN-HVDPVKVAMRVIDGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARI+VSNLHKNTKK+F++ + D+Y + N R+ KAP+I+D++
Sbjct: 60 AETAATMTTAHPDYARLAARISVSNLHKNTKKTFTDVVTDLYEYVNPRTEKKAPMISDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I NA L+S IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVS+GIH
Sbjct: 120 YQVIQDNADRLNSAIIYNRDFGYDYFGFKTLERSYLLKINGKIAERPQHMLMRVSVGIHM 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+D+AI+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ M+DDSIEGIY+TLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYI GTNGTSNGIVPML+V+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRARGSYIGGTNGTSNGIVPMLKVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+ DLFM+RV+ N W+L CP+E L
Sbjct: 300 MEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMSDLFMKRVEANDTWTLMCPHECPDLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFE LYT YE+EGK +K +QA+ LW +IL SQIETGTPYML+KD N KSNQ+NL
Sbjct: 360 NVYGDEFEALYTKYEQEGKGRKTIQARELWDKILESQIETGTPYMLYKDAANNKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP F+ K+ F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KDGAF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L +VT VT NLNK+ID NYYPV AR SN+RHRP+G+G+QGLAD FI+L + F S
Sbjct: 460 DHKALYKVTKRVTRNLNKVIDRNYYPVIEARNSNMRHRPVGLGIQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
EA++LN +IFET+Y+ A + S E+A +EG Y T+ SP+S+G Q +MWN+ SD R
Sbjct: 520 DEAKKLNSEIFETLYFAACEASMEMAQEEGAYSTFEGSPMSQGEFQFNMWNINDSDLSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RR LSGEF+VVN
Sbjct: 580 WNWSDLRTKVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRTLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL ++G+W ++KN I+ ++GS+Q I IPE++K +YKTVWE+K ++DM+ R
Sbjct: 640 KHLLKDLVDLGLWDDSLKNAIMRNNGSIQAIEGIPEDIKELYKTVWELKMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ K+TS+HF W GLKTGMYYLR++AA DAIKFTV K
Sbjct: 700 GYFIDQSQSLNLFMENVTTSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTVTKEAKK 759
Query: 778 EKPEKP 783
+P
Sbjct: 760 APVAQP 765
>gi|47222551|emb|CAG02916.1| unnamed protein product [Tetraodon nigroviridis]
Length = 898
Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/917 (57%), Positives = 646/917 (70%), Gaps = 131/917 (14%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPV----------------------------- 37
DGRQEAV FDKIT+R++KL YGL++E DPV
Sbjct: 1 DGRQEAVSFDKITSRVQKLCYGLNSEFVDPVSTNRQCGPVGQTGPLCVLVPVTRLLWLCQ 60
Query: 38 -LVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSE 96
++ KV G+Y GVTT++LD LAAETAA +TT HPDYA LAARIAVSNLHK TKK FS+
Sbjct: 61 AQITLKVIQGLYSGVTTAELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVFSD 120
Query: 97 TIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYL 156
++D+YN+ N + L +P+I+ + II +N A L+S IIYDRDF Y++FGFKTLERSYL
Sbjct: 121 VMEDLYNYVNPLNKLHSPMISKETLHIIRENKARLNSAIIYDRDFSYNFFGFKTLERSYL 180
Query: 157 LKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
LK+ GKV ERPQHMLMRV++GIH+ D+++AI+TY+++S+RWFTHASPTLFNAGT R QLS
Sbjct: 181 LKINGKVAERPQHMLMRVAVGIHQADMEAAIETYNLLSERWFTHASPTLFNAGTNRSQLS 240
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SCFL+ MKDDSIEGIY+TLK+CA++SKSAGGIG++V IRATGSYI GTNG SNG+VPML
Sbjct: 241 SCFLLTMKDDSIEGIYDTLKQCALVSKSAGGIGLAVSCIRATGSYIAGTNGKSNGLVPML 300
Query: 277 RVFNDTARYVDQGG----------------------------GKRKGAFAVYLEPWHADI 308
RV+N+TARYVDQGG G+R GAFAVYLEPWH+D+
Sbjct: 301 RVYNNTARYVDQGGNKVRMKVGEQTASRLRNIRDVIQVWLFLGQRPGAFAVYLEPWHSDV 360
Query: 309 FEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFE 368
F+FL LKKN GKEE RARDLF+ALW+PDLFM+RV++N WSL CP+E GL DCWG EFE
Sbjct: 361 FDFLELKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPSECPGLTDCWGEEFE 420
Query: 369 KLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNL 428
+LYT YE+EG+AK+VV+AQ LW+ I+ SQ ETGTPYML+KD CNRKSNQQNLGTI+ SNL
Sbjct: 421 ELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNLGTIRCSNL 480
Query: 429 CTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEV 488
CTEI+EYTS E AVCNLASIAL +V + R +DF KLA V
Sbjct: 481 CTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPQRTYDFHKLASV 521
Query: 489 TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNK 548
T + +NLNKIID+NYYPV A+RSNLRHRPIGIGVQGLAD FIL+ +ESPEAQ LN
Sbjct: 522 TKTIVKNLNKIIDINYYPVPEAKRSNLRHRPIGIGVQGLADAFILMRHPYESPEAQLLNT 581
Query: 549 DIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMIS 608
IFETIY+ AL+ S E+AA+ GPY+TY SPVS+G+LQ DMW P+D WDW L++ I+
Sbjct: 582 QIFETIYHAALEASCELAAEFGPYQTYAGSPVSRGVLQYDMWGKTPTDLWDWTALKEKIA 641
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV------------- 655
K+GVRNSLL+APMPTAST+QILGNNE FE YTSNIY+RRVLSGEF V
Sbjct: 642 KHGVRNSLLLAPMPTASTAQILGNNESFEAYTSNIYTRRVLSGEFQVCTRAFRPSLTAAG 701
Query: 656 ------------VNKHLLHDLTEMGIWSPTIKNKIIYDDGSV------------------ 685
VN HLL DLTE G+WS +KN++I +GS+
Sbjct: 702 KAERKIWPRLQIVNPHLLKDLTERGLWSDGMKNQLIAHNGSIQVERRICCISSTISLWQK 761
Query: 686 -----------QKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQP 734
Q IPEIP++LK +YKTVWEI Q T++ MA DRG +IDQSQSLNIH+ +P
Sbjct: 762 PIFYKYFFNGQQNIPEIPDDLKQLYKTVWEISQKTVLKMAADRGAFIDQSQSLNIHIAEP 821
Query: 735 NFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMA 794
N+ K+TS+HF W GLKTGMYYLR++ AA+ I+FT++ KE E A
Sbjct: 822 NYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNKETLKEAQAARSEEESKERNAA 881
Query: 795 QVVCSLTNREECMACGS 811
VVCSL N++ECM CGS
Sbjct: 882 AVVCSLANKDECMMCGS 898
>gi|68525530|ref|XP_723625.1| ribonucleoside-diphosphate reductase large chain [Plasmodium yoelii
yoelii 17XNL]
gi|23477980|gb|EAA15190.1| ribonucleoside-diphosphate reductase large chain [Plasmodium yoelii
yoelii]
Length = 847
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/825 (61%), Positives = 628/825 (76%), Gaps = 37/825 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI NLHKNT ++ + +Y+ Y + G A LI+ ++
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIAKVAEALYS-YKDIRGRSASLISKEV 159
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ IM++ L+ EI Y RDF+YDYFGFKTLERSYLL++ K++ERPQH+LMRVSIGIH
Sbjct: 160 YDFIMEHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ A++TYH+MSQ++FTHA+PTLFN+GTPRPQ+SSCFL+ MK DSIEGI+ETLK+CA+
Sbjct: 220 DDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+L+KNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAIWVPDLFMKRVKENRNWTLMCPNECPGLS 399
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLYT YE E KK V AQ+LWF IL SQIETG PYML+KD CN KSNQ+NL
Sbjct: 400 ESWGEEFEKLYTKYEEENLGKKTVLAQDLWFAILQSQIETGVPYMLYKDACNSKSNQKNL 459
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV-REKDVPVESHPSRIVGSRGSKNRF 479
GTIK SNLC EIIEYTSP E AVCNLASIAL +FV REK +
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFVDREK-------------------KE 500
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
FDF+KL ++T I+T NL+KII+ NYYP++ A +SN RHRPIGIGVQGLADTF+LL +E
Sbjct: 501 FDFKKLYDITKIITRNLDKIIERNYYPIKEAEKSNKRHRPIGIGVQGLADTFMLLRYPYE 560
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRW 598
S EA++LNK IFET+YY AL+ S E+A GPYE+Y SP S+GILQ DMWNV + + W
Sbjct: 561 SDEAKELNKRIFETMYYAALEMSVELAQIHGPYESYKGSPASQGILQFDMWNVKVDNKYW 620
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +L+ IS +G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN
Sbjct: 621 DWDLLKKKISMHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNP 680
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
HLL DL + G+W +K ++I +GSVQ I EIP +LK +YKTVWEIKQ ++DMA DRG
Sbjct: 681 HLLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPADLKELYKTVWEIKQKNIIDMAADRG 740
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK- 777
+IDQSQSLNI++ +P F K++S+HF W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 741 VFIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKN 800
Query: 778 -EKPEKPELV----------VDDETKMAQVVCSL--TNREECMAC 809
EK + + V + E+ + Q C L N E C+ C
Sbjct: 801 AEKLKNADGVAITREVSRETISTESTVTQNACPLRRNNDEPCLMC 845
>gi|443242948|ref|YP_007376173.1| ribonucleoside-diphosphate reductase [Nonlabens dokdonensis DSW-6]
gi|442800347|gb|AGC76152.1| ribonucleoside-diphosphate reductase [Nonlabens dokdonensis DSW-6]
Length = 868
Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/786 (64%), Positives = 624/786 (79%), Gaps = 28/786 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDG +E V FDKITAR++KL YGLS H DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGHKEPVMFDKITARVRKLCYGLSN-HVDPVKVAMRVIDGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARI+VSNLHKNTKK+FS+ + D+Y + N R+ KAP+I+D++
Sbjct: 60 AETAATMTTAHPDYARLAARISVSNLHKNTKKTFSDVVTDLYEYVNPRTSKKAPMISDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I NA L+S IIY+RDF YDYFGFKTLERSYLLK+ G++ ERPQHMLMRVS+GIH
Sbjct: 120 YKVIQDNADRLNSAIIYNRDFGYDYFGFKTLERSYLLKINGQIAERPQHMLMRVSVGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+D+AI+TY +MS+++FTHA+PTLFNAGTP+PQ+SSCFL+ M+DDSIEGIY+TLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYI GTNGTSNGIVPML+V+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRARGSYIGGTNGTSNGIVPMLKVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+LKKNHGKEE RARDLFYA+W+ DLFM+RV+TN W+L CP+E L
Sbjct: 300 MEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVETNDTWTLMCPHECPDLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ G EFE LYT YE+EGK +K + A+ LW +IL SQIETGTPYML+KD N KSNQ+NL
Sbjct: 360 NVHGDEFEALYTKYEQEGKGRKTIPARELWDKILESQIETGTPYMLYKDAANNKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEIIEYT+P E AVCNLASIALP FV K+ F
Sbjct: 420 GTIRSSNLCTEIIEYTAPDEVAVCNLASIALPMFV--------------------KDGAF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L +VT VT NLNK+ID NYYPV+ A SN+RHRP+G+G+QGLAD FI+L + F
Sbjct: 460 DHKALYKVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGIQGLADAFIMLRLPFTC 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDR 597
EA+QLN DIFET+Y+ A + S E+A +EG Y T+ SP+S+G Q +MWN+ S R
Sbjct: 520 DEAKQLNSDIFETLYFAACEASMEMAQEEGAYSTFAGSPMSQGQFQYNMWNINDDQLSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RR LSGEF+VVN
Sbjct: 580 WNWADLRTKVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRTLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL ++G+W ++KN I+ ++GS+Q I IPE++K +YKTVWE+K ++DM+ +R
Sbjct: 640 KHLLKDLVDLGLWDDSLKNAIMRNNGSIQAIEGIPEDIKELYKTVWELKMKDIIDMSRER 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ K+TS+HF W GLKTGMYYLR++AA DAIKFTV K
Sbjct: 700 GYFIDQSQSLNLFMENVTTSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTVT----K 755
Query: 778 EKPEKP 783
EK P
Sbjct: 756 EKKAVP 761
>gi|380020101|ref|XP_003693934.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase large subunit-like [Apis florea]
Length = 822
Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/834 (61%), Positives = 636/834 (76%), Gaps = 41/834 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E VHFDKIT+R+ KL Y L ++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRISKLCYNLDMDYIDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA LAARIA+SNLHK T KSFSE + ++Y+ + + + P+I++
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETTKSFSEVMYNLYHVKEQYTNNQKPVISEKY 126
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y II KNA L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKVVERPQHMLMRV++ IH
Sbjct: 127 YNIIQKNANKLNSAIIYDRDFSYNYFGFKTLERSYLLKIHGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID AI+TY+ +S+R+FTHASPTLF+A T + Q+SSCFL+ M +DSIEGIY+TLK CA+
Sbjct: 187 EDIDKAIETYNFLSERYFTHASPTLFSACTRQQQMSSCFLLTMSEDSIEGIYDTLKRCAL 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GT G SNG++PM+RV+N+TARYVDQGG KR GAFA+Y
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLIPMIRVYNNTARYVDQGGNKRPGAFAIY 306
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LKKN GKEE+RAR+LFYALW+PDLFM+RV NG W+L CP+E+ GLA
Sbjct: 307 LEPWHADIFEFLDLKKNTGKEENRARELFYALWIPDLFMKRVLDNGIWTLMCPHESPGLA 366
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LYT YE E + K+ +QA++LW IL SQ+ETGTPYML+KD CNRKSN QN+
Sbjct: 367 DVWGNEFEILYTRYENEKRYKRQIQARDLWTAILISQVETGTPYMLYKDHCNRKSNHQNI 426
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTE+++Y+SP E AVCNLASIA+ FV N+ F
Sbjct: 427 GTIKSSNLCTEVVQYSSPDEVAVCNLASIAVNMFV------------------NPNNQTF 468
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT IVT NL+KIIDVNYYP+ AR+SN RHRPIGIG+QGLAD F+L+ FES
Sbjct: 469 DFQKLLKVTKIVTCNLDKIIDVNYYPIPEARKSNFRHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ+LN IFET+YY AL+ S E+A ++G YETY SPVSKGILQ DMWNVIP++ WDW
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAEEKGTYETYEGSPVSKGILQYDMWNVIPTNLWDW 588
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L+ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 589 TILKXKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHL 648
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE +W +KN+II ++GS+Q I IP++LKM+YKTVWEI Q ++ MA DRG +
Sbjct: 649 LRDLTERDLWDEDMKNEIIANNGSIQDIERIPDDLKMLYKTVWEIPQKIILKMAADRGAF 708
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-- 778
IDQSQSLN+HM +P +K+TS+HF W GLKTGMYYLR++ AA+A++FTVD S +
Sbjct: 709 IDQSQSLNVHMAKPTTEKLTSMHFYGWKMGLKTGMYYLRTKPAANALQFTVDKSKLRNIT 768
Query: 779 -------------------KPEKPELVVDDETKMAQVV--CSLTNREECMACGS 811
+ + D + +V CS N + CMACGS
Sbjct: 769 NITSNQSINSENDNNEELNNSSQNGWLQDQNKEDVDIVLACSRENGDACMACGS 822
>gi|408491218|ref|YP_006867587.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Psychroflexus torquis ATCC 700755]
gi|408468493|gb|AFU68837.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Psychroflexus torquis ATCC 700755]
Length = 815
Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/795 (61%), Positives = 627/795 (78%), Gaps = 26/795 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G++E V FDKITAR++KL YGL+ +P V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MHVIKRNGQKEPVMFDKITARIRKLCYGLNP-LVEPAKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE +A MT +HPDYA LAARI+VSNLHKNTKKSFSE + D+Y + N R+ K+PLIADD+
Sbjct: 60 AEISATMTVSHPDYAQLAARISVSNLHKNTKKSFSEVMADLYEYVNPRNNKKSPLIADDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++I ++ LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVS+GIH
Sbjct: 120 YKVIEEHKDELDSRIIYSRDFNYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSLGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D++S ++TY +MS+++FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSI+GIY+TLK+ A
Sbjct: 180 EDLESVLETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAR 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF FL+LKKNHG EE RARDLFYA+W+PDLFM+RV+ N W+L CPNE L
Sbjct: 300 VEPWHADIFSFLDLKKNHGAEEMRARDLFYAMWIPDLFMKRVEENSTWTLMCPNECPNLY 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ EF++LY YE+E K +K ++A+ LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 360 NVHSEEFDELYLKYEQENKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYTSP E AVCNLASIALP FV KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KNGEF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
++L ++T + +NLNK+ID NYYPV+ A SN RHRP+G+G+QGLAD FI+L M F S
Sbjct: 460 QHKELYKITKQIIKNLNKVIDRNYYPVKEAENSNFRHRPVGLGIQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
EA++LN++IFET+Y+ A+++S E+A EGPY ++ SP+SKG Q ++W + +D R
Sbjct: 520 DEAKKLNQEIFETLYFAAVESSMELAKIEGPYSSFEGSPISKGEFQFNLWGLTDNDTSGR 579
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W LR+ + K+GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WNWSKLREKVMKHGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KHLL DL +G+W +K+ I+ +GSVQ I IP+++K +YKTVWE+ ++DM+ R
Sbjct: 640 KHLLKDLVSLGLWDDDLKDAIMRANGSVQGIDIIPDDIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLN+ M+ F K+TS+HF W GLKTGMYYLR+++A DAIKFT+ + K
Sbjct: 700 GYFIDQSQSLNLFMEGATFAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKSE--K 757
Query: 778 EKPEKPELVVDDETK 792
++ E P VV + K
Sbjct: 758 KEKEAPSQVVQNAAK 772
>gi|124809244|ref|XP_001348526.1| ribonucleoside-diphosphate reductase, large subunit [Plasmodium
falciparum 3D7]
gi|23497421|gb|AAN36965.1|AE014821_52 ribonucleoside-diphosphate reductase, large subunit [Plasmodium
falciparum 3D7]
Length = 847
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/824 (61%), Positives = 622/824 (75%), Gaps = 35/824 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI NLHKNT +E + +Y Y + G A LI+ ++
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYT-YKDVRGRPASLISKEV 159
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ I+ + L+ EI Y RDF+YDYFGFKTLERSYLL++ K++ERPQH+LMRVSIGIH
Sbjct: 160 YDFILLHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDID A++TYH+MSQ++FTHA+PTLFN+GTPRPQ+SSCFL+ MK DSIEGI+ETLK+CA+
Sbjct: 220 DDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+L+KNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 399
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLYT YE E KK V AQ+LWF IL SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 400 ETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 459
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC EIIEYTSP E AVCNLASIAL +FV + + F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DLEKKEF 501
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+T I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL +ES
Sbjct: 502 NFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
A++LNK IFET+YY AL+ S E+A+ GPYE+Y SP S+GILQ DMWN + + WD
Sbjct: 562 DAAKELNKRIFETMYYAALEMSVELASIHGPYESYQGSPASQGILQFDMWNAKVDNKYWD 621
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDELKAKIRKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL + G+W +K ++I +GS+Q I EIP++LK +YKTVWEIKQ ++DMA DRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGI 741
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+IDQSQSLNI++ +P F K++S+HF W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNA 801
Query: 780 ------------PEKPELVVDDETKMAQVVCSL--TNREECMAC 809
E + E+ + Q VC L N E+C+ C
Sbjct: 802 VKLKNADGVQITREVSRETISTESTVTQNVCPLRRNNDEQCLMC 845
>gi|1710391|sp|P50648.1|RIR1_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|497904|gb|AAA50171.1| ribonucleotide reductase large subunit [Plasmodium falciparum]
Length = 806
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/824 (61%), Positives = 622/824 (75%), Gaps = 35/824 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI NLHKNT +E + +Y Y + G A LI+ ++
Sbjct: 60 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYT-YKDVRGRPASLISKEV 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ I+ + L+ EI Y RDF+YDYFGFKTLERSYLL++ K++ERPQH+LMRVSIGIH
Sbjct: 119 YDFILLHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDID A++TYH+MSQ++FTHA+PTLFN+GTPRPQ+SSCFL+ MK DSIEGI+ETLK+CA+
Sbjct: 179 DDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFETLKQCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 239 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+L+KNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE GL+
Sbjct: 299 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLYT YE E KK V AQ+LWF IL SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 359 ETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC EIIEYTSP E AVCNLASIAL +FV + + F
Sbjct: 419 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DLEKKEF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+T I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL +ES
Sbjct: 461 NFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYPYES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
A++LNK IFET+YY AL+ S E+A+ GPYE+Y SP S+GILQ DMWN + + WD
Sbjct: 521 DAAKELNKRIFETMYYAALEMSVELASIHGPYESYQGSPASQGILQFDMWNAKVDNKYWD 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 581 WDELKAKIRKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL + G+W +K ++I +GS+Q I EIP++LK +YKTVWEIKQ ++DMA DRG
Sbjct: 641 LLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGI 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+IDQSQSLNI++ +P F K++S+HF W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 701 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNA 760
Query: 780 ------------PEKPELVVDDETKMAQVVCSL--TNREECMAC 809
E + E+ + Q VC L N E+C+ C
Sbjct: 761 VKLKNADGVQITREVSRETISTESTVTQNVCPLRRNNDEQCLMC 804
>gi|392575022|gb|EIW68156.1| hypothetical protein TREMEDRAFT_39705 [Tremella mesenterica DSM
1558]
Length = 856
Score = 1051 bits (2718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/778 (63%), Positives = 611/778 (78%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M++ KRDGR+E V FDK+TAR+ KLSYGL +P ++QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEHVAFDKVTARINKLSYGLDPNFIEPAEITQKVIQGIHTGITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIA+SNLHK TKKSFS + D+Y+ N ++G AP+IAD++
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKSFSAVVHDLYSWVNPKTGKHAPMIADEV 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y++IM N LD+ IIYDRDF Y+YFGFKTLERSYLL+V GK+VERPQHM+MRV++GIH
Sbjct: 123 YKVIMDNKDTLDAAIIYDRDFAYNYFGFKTLERSYLLRVNGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+ID ++TY++MS+R+FTHASPTLFNAGTP Q+SSCFLV M+DDSIEGIY+TLK CA
Sbjct: 183 DNIDKVLETYNLMSERYFTHASPTLFNAGTPHAQMSSCFLVAMRDDSIEGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL+L+KNHGKEE RARDLFYALW+ DLFM+RV+++G W+L CP E GLA
Sbjct: 303 LEPWHADIFDFLDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D FE+LY YEREGK +K ++AQ LWF IL +Q ETG P+ML+KD N KSNQQ+L
Sbjct: 363 DVHSEAFEELYERYEREGKGRKTIKAQKLWFAILEAQTETGGPFMLYKDAANAKSNQQHL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEY++P E AVCNLAS+ALP FV + R +
Sbjct: 423 GTIKSSNLCTEIIEYSAPDEVAVCNLASLALPAFV------------------DMERRVY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+T +VT+NL+ +I NYYPV A RSN+RHRP+G+GVQGLAD F+ L M F+S
Sbjct: 465 DFKKLHEITKVVTKNLDTVISRNYYPVPEAHRSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
P A++LN IFETIY+ AL++S E+A + G YETY SP+S+G LQ D+W +P+D WDW
Sbjct: 525 PAARELNIQIFETIYHAALESSCEMAQERGKYETYEGSPISQGKLQFDLWGRVPTDLWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y+RRVLSG+F VV L
Sbjct: 585 TELRANIAKHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +G+W +KN II GS+Q IP IP ELK IYKTVWEI Q ++D+A DRG Y
Sbjct: 645 LRDLINLGLWDDHMKNLIIAAGGSIQNIPSIPAELKAIYKTVWEISQKAVIDLAADRGAY 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
IDQSQSLNIH+ P+F ++TS+HF W RGLKTG+YYLR++ +A AI+FT+D S K+
Sbjct: 705 IDQSQSLNIHLANPSFSQLTSMHFYGWKRGLKTGLYYLRTKPSAQAIQFTIDASTLKQ 762
>gi|68070011|ref|XP_676917.1| ribonucleoside-diphosphate reductase, large subunit, [Plasmodium
berghei strain ANKA]
gi|56496825|emb|CAH95342.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Plasmodium berghei]
Length = 847
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/825 (61%), Positives = 624/825 (75%), Gaps = 37/825 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E V FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDVSFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI NLHK+T + + +Y Y + G A LI+ ++
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKSTNDDIGKVAEALYT-YKDIRGRSASLISKEV 159
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ IM++ L+ EI Y RDF+YDYFGFKTLERSYLL++ K++ERPQH+LMRVSIGIH
Sbjct: 160 YDFIMEHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ A++TYH+MSQ++FTHA+PTLFN+GTPRPQ+SSCFL+ MK DSIEGI+ETLK+CA+
Sbjct: 220 DDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+L+KNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAIWVPDLFMKRVKENKNWTLMCPNECPGLS 399
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLYT YE E KK V AQ+LWF IL SQIETG PYML+KD CN KSNQ+NL
Sbjct: 400 ESWGDEFEKLYTKYEEENLGKKTVLAQDLWFAILQSQIETGVPYMLYKDACNSKSNQKNL 459
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV-REKDVPVESHPSRIVGSRGSKNRF 479
GTIK SNLC EIIEYTSP E AVCNLASIAL +FV REK +
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFVDREK-------------------KE 500
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
F+F+KL ++T I+T NL+KII+ NYYP++ A +SN RHRPIGIGVQGLADTF+LL +E
Sbjct: 501 FNFKKLYDITKIITRNLDKIIERNYYPIKEAEKSNKRHRPIGIGVQGLADTFMLLRYPYE 560
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRW 598
S EA++LNK IFET+YY AL+ S E+A GPYE+Y SP S+GILQ DMWN + + W
Sbjct: 561 SDEAKELNKRIFETMYYAALEMSVELAQVHGPYESYKGSPASQGILQFDMWNAKVDNKYW 620
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +L+ IS +G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN
Sbjct: 621 DWDLLKKKISIHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNP 680
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
HLL DL + G+W +K ++I +GSVQ I EIP +LK +YKTVWEIKQ ++DMA DRG
Sbjct: 681 HLLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPNDLKELYKTVWEIKQKNIIDMAADRG 740
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK- 777
+IDQSQSLNI++ +P F K++S+HF W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 741 VFIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKN 800
Query: 778 -EKPEKPE----------LVVDDETKMAQVVCSL--TNREECMAC 809
EK + E + E+ + Q C L N E C+ C
Sbjct: 801 AEKLKNAEGATITREVSRETISTESTVTQNACPLRRNNDEPCLMC 845
>gi|50290817|ref|XP_447841.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527152|emb|CAG60790.1| unnamed protein product [Candida glabrata]
Length = 894
Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/778 (62%), Positives = 618/778 (79%), Gaps = 16/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KR GR+E V FDKITAR+ +L YGL D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRSGRKEPVKFDKITARISRLCYGLDP-RIDAVKVTQRIISGVYEGVTTVELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAAR+A+SNLHK T K FS+ + ++Y++ N +G AP+I+D++
Sbjct: 60 AETCAYMTTIHPDYATLAARVAISNLHKQTTKQFSQVVSNLYHYINPATGKHAPMISDEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+M N LDS I+YDRDF ++YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 120 YQIVMDNKDELDSAIVYDRDFQFNYFGFKTLERSYLLRINGEVAERPQHLIMRVALGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+++A++TY++MS R+FTHASPTLFNAGTP PQ+SSCFLV MKDDSIEGIY+TLKECA+
Sbjct: 180 RDLEAALETYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAL 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 240 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALWVPDLFM+RV+ NG W+LF P+ A GL+
Sbjct: 300 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWVPDLFMKRVEQNGNWTLFSPSSAPGLS 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CN KSNQ+NL
Sbjct: 360 DCYGKEFEELYERYEREGRG-KTIKAQKLWYSILEAQTETGTPFMIYKDACNEKSNQRNL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY+SP ETAVCNLASIALP F+ S K +
Sbjct: 419 GVIKSSNLCCEIVEYSSPDETAVCNLASIALPAFIET--------------SEDGKTSTY 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL ++ ++T NLNK+ID NYYPV A+ SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 465 NFQKLHDIAKVITRNLNKVIDRNYYPVPEAKNSNMRHRPIALGVQGLADTFMLLRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A +LN IFETIY+ +L+ S E+A K+GPY++Y SP+SKG+ Q DMWN P WDW
Sbjct: 525 EGAAKLNIQIFETIYHASLEASCELAQKDGPYQSYQGSPISKGVFQFDMWNAKPFGMWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+GVRNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 585 DALRKDILKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K II +GS+Q +P IP+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 645 LRDLVDLGIWDEGMKQHIITQNGSIQNLPNIPQELKDLYKTVWEISQKTIINMAADRSVY 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D SV ++
Sbjct: 705 IDQSHSLNLFLQAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQSVAQQ 762
>gi|294941788|ref|XP_002783240.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239895655|gb|EER15036.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 792
Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/820 (62%), Positives = 633/820 (77%), Gaps = 43/820 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KR+G++ V FDKIT R++ L+ GL+ ++ D ++QKV G+Y GVTT++LD LA
Sbjct: 3 MYVIKRNGQKADVQFDKITKRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A M+ HPD+++LAARIAVSNLHKNT +SFSET+ ++YN + R G +PL+++++
Sbjct: 63 AETCAYMSQVHPDFSTLAARIAVSNLHKNTHESFSETVTELYNITDSR-GRSSPLVSEEV 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGI 178
Y +++ NA LD I YDRDFDYDYFGFKTLERSYLLK +ERPQHM+MRV++GI
Sbjct: 122 YNLVLMNADKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDKTCIERPQHMIMRVAVGI 181
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
H DD+D+AI+TY +MS R FTHA+PTLFN+GTP PQ+SSCFL+ +K+DSIEGIY+TLK+C
Sbjct: 182 HGDDVDAAIETYALMSTRVFTHATPTLFNSGTPHPQMSSCFLLSIKEDSIEGIYDTLKQC 241
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGV++ IRAT SYIRGTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+FA
Sbjct: 242 AMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKRKGSFA 301
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
VYLEPWHAD+FEFL+LKKNHGKEEHRARDLFYALW+PDLFM+RV NG W+LFCPNEA G
Sbjct: 302 VYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMANGDWTLFCPNEAPG 361
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L D +G EFE LY YE++G +K V+AQ+LWF+IL SQ ETG PYML+KD+ NRKSNQ+
Sbjct: 362 LQDTYGDEFEALYEKYEKDGIGRKTVKAQSLWFKILESQQETGIPYMLYKDSANRKSNQK 421
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
NLGTI+ SNLC EIIEYTSP E AVCNLASIAL FV + K R
Sbjct: 422 NLGTIRCSNLCCEIIEYTSPDEVAVCNLASIALNMFVDK------------------KTR 463
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
+DF +L V +VT+NLNK+ID NYYPV AR+SN+RHRPIGIGVQGLAD F+L+ +
Sbjct: 464 TYDFGRLHRVAKVVTKNLNKVIDRNYYPVPEARKSNMRHRPIGIGVQGLADAFLLMRFPY 523
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDR 597
ESPEA +LN DIFETIY+ A + S E+A ++GPYET+ SP S+GILQ DMW+V P S R
Sbjct: 524 ESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPASEGILQFDMWDVTPDSGR 583
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ + KNG+RNSLL+APMPTAST+QILGNNE FEPYT NIY RRVL+GEFV VN
Sbjct: 584 WDWASLKEEVKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVN 643
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HL+ DL E+G+W+ IK+KII GSVQ + EIP E++ +Y+TVWEIKQ ++DMA R
Sbjct: 644 RHLVDDLMELGLWNDEIKDKIIRKKGSVQGVEEIPMEIQALYRTVWEIKQKKILDMAAGR 703
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF- 776
G YIDQSQSLNIHM K++S+HF W GLKTG YYLR++AAADAI+FT+D
Sbjct: 704 GPYIDQSQSLNIHMTNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAADAIQFTLDAKKVT 763
Query: 777 -------KEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P KP+ V +DE E C+AC
Sbjct: 764 VESPLKPRSSPLKPQYVQEDE-------------ETCIAC 790
>gi|22164662|ref|NP_671575.1| EVM057 [Ectromelia virus]
gi|22123803|gb|AAM92361.1|AF523264_57 EVM057 [Ectromelia virus]
gi|383866777|gb|AFH54620.1| ribonucleotide reductase large subunit [Ectromelia virus]
Length = 771
Score = 1047 bits (2708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/790 (63%), Positives = 614/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVVKRNGCRENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV +G+WSL CPNE GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVNDDGEWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NAWGDEFERLYTQYEREKRYKNIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNVFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYAGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I +G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSHGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+II D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIIADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++AA+ I+FT+D KEK
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKAASSPIQFTLD----KEKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPSMVCDSE 764
>gi|294871762|ref|XP_002766029.1| ribonucleoside-diphosphate reductase large chain, putative
[Perkinsus marinus ATCC 50983]
gi|239866594|gb|EEQ98746.1| ribonucleoside-diphosphate reductase large chain, putative
[Perkinsus marinus ATCC 50983]
Length = 1504
Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/787 (64%), Positives = 624/787 (79%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KR+G++ V FDKIT R++ L+ GL+ ++ D ++QKV G+Y GVTT++LD LA
Sbjct: 3 MYVIKRNGQKADVQFDKITKRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A M+ HPD+++LAARIAVSNLHKNT +SFSETI ++YN + R G +PL+++++
Sbjct: 63 AETCAYMSQVHPDFSTLAARIAVSNLHKNTHESFSETITELYNITDSR-GRSSPLVSEEV 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGI 178
Y I+ NA LD I YDRDFDYDYFGFKTLERSYLLK +ERPQHM+MRV++GI
Sbjct: 122 YNIVKMNADKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDKTCIERPQHMIMRVAVGI 181
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
H DD+D+AI+TY +MS R FTHA+PTLFN+GTP PQ+SSCFL+ +K+DSIEGIY+TLK+C
Sbjct: 182 HGDDVDAAIETYALMSTRVFTHATPTLFNSGTPHPQMSSCFLLSIKEDSIEGIYDTLKQC 241
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGV++ IRAT SYIRGTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+FA
Sbjct: 242 AMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKRKGSFA 301
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
VYLEPWHAD+FEFL+LKKNHGKEEHRARDLFYALW+PDLFM+RV NG W+LFCPNEA G
Sbjct: 302 VYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMANGDWTLFCPNEAPG 361
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L D +G EFE LY YE++G +K V+AQ+LWF+IL SQ ETG PYML+KD+ NRKSNQ+
Sbjct: 362 LQDTYGEEFEALYEKYEKDGIGRKTVKAQSLWFKILESQQETGIPYMLYKDSANRKSNQK 421
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
NLGTI+ SNLC EIIEYTS E AVCNLASIAL FV + K R
Sbjct: 422 NLGTIRCSNLCCEIIEYTSSDEVAVCNLASIALNMFVDK------------------KTR 463
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
+DF++L V +VT+NLNK+ID NYYPV AR+SN+RHRPIGIGVQGLAD F+L+ +
Sbjct: 464 TYDFDRLHRVAKVVTKNLNKVIDRNYYPVPEARKSNMRHRPIGIGVQGLADAFLLMRYPY 523
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDR 597
ESPEA +LN DIFETIY+ A + S E+A ++GPYET+ SP S+GILQ DMW+VIP S R
Sbjct: 524 ESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPASEGILQFDMWDVIPDSGR 583
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ I KNG+RNSLL+APMPTAST+QILGNNE FEPYT NIY RRVL+GEFV VN
Sbjct: 584 WDWASLKEEIKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVN 643
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HL+ DL E+G+W+ IK+KII GSVQ + EIP E++ +YKTVWEIKQ ++DMA R
Sbjct: 644 RHLVDDLMELGLWNDEIKDKIIRKKGSVQGVEEIPSEIQDLYKTVWEIKQKKILDMAAGR 703
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT-SVF 776
G YIDQSQSLNIHM K++S+HF W GLKTG YYLR++AAADAI+FT+D V
Sbjct: 704 GPYIDQSQSLNIHMTNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAADAIQFTLDAKKVT 763
Query: 777 KEKPEKP 783
E P KP
Sbjct: 764 VESPLKP 770
>gi|323308679|gb|EGA61920.1| Rnr3p [Saccharomyces cerevisiae FostersO]
Length = 887
Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/777 (62%), Positives = 608/777 (78%), Gaps = 17/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDG +E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGXKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSXAPGLD 376
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF-KDTCNRKS-NQQ 418
D WG EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETG + F KD C ++ NQQ
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGNTFPWFYKDACKQEGQNQQ 435
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
NLGTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S K
Sbjct: 436 NLGTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTA 481
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
++FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT ++L + F
Sbjct: 482 SYNFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTXMMLRLPF 541
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW 598
ES EAQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P W
Sbjct: 542 ESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMW 601
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN
Sbjct: 602 DWETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNP 661
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
+LL DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR
Sbjct: 662 YLLRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRA 721
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
YIDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IYIDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 778
>gi|358338264|dbj|GAA30040.2| ribonucleoside-diphosphate reductase subunit M1 [Clonorchis sinensis]
Length = 1065
Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/841 (58%), Positives = 624/841 (74%), Gaps = 50/841 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGR E VH +KI+ R++ L YGL D ++++V G+Y GVTTS+LD LA
Sbjct: 241 IYVLKRDGRTEGVHCEKISKRIRALCYGLDESCIDIPAITRRVVTGLYPGVTTSELDNLA 300
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE A MTT H Y +LAAR+AVSNLHKNTK SFSE ++D+Y + NER+ L +P++++++
Sbjct: 301 AEVCACMTTRHHAYGTLAARLAVSNLHKNTKASFSEAMEDLYGYVNERTKLHSPILSEEV 360
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+II +NA L+S I Y RDF+Y+YFGFKTLERSYL K+ GKV ERPQHMLMR S+GIHK
Sbjct: 361 IKIIRENADRLNSAIDYQRDFNYNYFGFKTLERSYLFKLHGKVHERPQHMLMRASVGIHK 420
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY++MS++WFTHASPTLFN+GT RPQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 421 RDIDAAIETYNLMSEKWFTHASPTLFNSGTTRPQMSSCFLITMKDDSIEGIYDTLKECAI 480
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV++HNIR+ G+YI GTNG SNGIVPMLRVFN+TARY+DQGG KR GAFAVY
Sbjct: 481 ISKNAGGIGVNIHNIRSAGTYIAGTNGDSNGIVPMLRVFNNTARYIDQGGNKRPGAFAVY 540
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+ +F+ ++KN G EE R RDLFYALW+PD+FM RV+ N W+L P+E GL
Sbjct: 541 LEPWHPDVLQFIEMRKNTGAEEIRGRDLFYALWIPDIFMRRVEANEDWTLMDPHECPGLP 600
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LY YE EG+ ++ + AQ +W I+ +QIETGTP+ML+KD CNRKSN Q+L
Sbjct: 601 DKWGEEFEALYLKYEAEGRGRRTLPAQEVWHSIIEAQIETGTPFMLYKDACNRKSNHQHL 660
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEIIEY+SP ETAVCNLASI+L FV +K F
Sbjct: 661 GTIRCSNLCTEIIEYSSPDETAVCNLASISLGHFV------------------DAKEHTF 702
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL VT ++T NLN++ID ++YPVE ARRSN+RHRPIGIGVQGLAD F+LL F+S
Sbjct: 703 DFDKLQYVTRVITRNLNRVIDNSFYPVEEARRSNMRHRPIGIGVQGLADAFLLLRYPFDS 762
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR--- 597
PEA LNK IFETIY+ AL S ++A +EGP+ETY PVSKGILQPDMW V +
Sbjct: 763 PEAAALNKRIFETIYFAALDASCDLAKEEGPFETYEGCPVSKGILQPDMWGVDTEELSKI 822
Query: 598 --WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
DW LR I K GVRNSLL+APMPTAST+QILGNNE EP+TSN+YSRRVLSGEF +
Sbjct: 823 SGLDWAGLRQRIKKYGVRNSLLLAPMPTASTAQILGNNESIEPFTSNVYSRRVLSGEFQI 882
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VN +L+ DL ++G+WS +K+ I+ + GSVQ I IP+E+K +YKT+WE+ Q ++DMA
Sbjct: 883 VNPYLMDDLNKLGLWSEELKSAIVANQGSVQDIQGIPDEIKALYKTIWELSQRKIIDMAA 942
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG +IDQSQSLN+H+ QPN+ K+TS+HF W +GLKTGMYYLR+R AAD IKFT+D +
Sbjct: 943 DRGPFIDQSQSLNLHVAQPNYGKITSMHFYAWKKGLKTGMYYLRTRPAADPIKFTIDKTR 1002
Query: 776 FKEKPEKPEL--VVDDET-------------------------KMAQVVCSLTNREECMA 808
+ E+ VV+ T M + CSL N E C++
Sbjct: 1003 VRALMERGVTVNVVNGTTGKGDAIDEQQEAEEEERIMKEIQRRNMEAITCSLKNPEGCLS 1062
Query: 809 C 809
C
Sbjct: 1063 C 1063
>gi|195119233|ref|XP_002004136.1| GI18284 [Drosophila mojavensis]
gi|193914711|gb|EDW13578.1| GI18284 [Drosophila mojavensis]
Length = 771
Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/792 (61%), Positives = 621/792 (78%), Gaps = 38/792 (4%)
Query: 37 VLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSE 96
V ++ KV G+Y GV+T +LD LAAE AA++TT H DYA LAARIAVSNLHK TKK FS+
Sbjct: 1 VSITLKVINGLYCGVSTQELDNLAAEIAASLTTLHADYALLAARIAVSNLHKETKKVFSD 60
Query: 97 TIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYL 156
+D++ H N+ + L +PL+++ Y I+ N+ L+S IIYDRDF Y+YFGFKTLERSYL
Sbjct: 61 VFEDLFKHVNKETNLPSPLVSEYHYNIVKNNSDRLNSAIIYDRDFGYNYFGFKTLERSYL 120
Query: 157 LKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
LK+ GK+ ERPQH+LMRV+IGIH +DIDSA++TY+++S+R+FTHASPTLF A T RPQLS
Sbjct: 121 LKINGKIAERPQHLLMRVAIGIHGEDIDSAVETYNLLSERFFTHASPTLFAAATNRPQLS 180
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SCFL+ + DSIEGI++++++CA+ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPML
Sbjct: 181 SCFLLTIVSDSIEGIFKSVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPML 240
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
RVFN+ ARYVDQGGGKR GAFA+YLEPWH+D+FEFL+LKKN GKEEHRARDLF+ALW+PD
Sbjct: 241 RVFNNVARYVDQGGGKRPGAFAIYLEPWHSDVFEFLDLKKNTGKEEHRARDLFFALWIPD 300
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTS 396
LFM+RV+ N WSL CP++ GL D WG +FE LY YEREG+A +V++AQ+LWF I+ S
Sbjct: 301 LFMKRVEANEDWSLMCPHKCPGLPDVWGEDFENLYIKYEREGRANRVIKAQSLWFAIIES 360
Query: 397 QIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVR 456
Q+ETGTPYMLFKD+CNRKSNQQN+GTIK SNLCTEI+EY++P E AVCNLASIAL FV
Sbjct: 361 QVETGTPYMLFKDSCNRKSNQQNVGTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV- 419
Query: 457 EKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLR 516
++ + +DF+KL +VT IVT+NLNKIID+NYYP+ A++SNLR
Sbjct: 420 ------------------TQEKSYDFKKLKDVTKIVTKNLNKIIDINYYPLPEAKKSNLR 461
Query: 517 HRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYH 576
HRPIGIGVQG AD IL+ ++ES EA LN+ IFETIYY AL+ S E+A ++GPYETY
Sbjct: 462 HRPIGIGVQGFADALILMRYSYESREAFLLNQQIFETIYYGALEASCELAQRDGPYETYV 521
Query: 577 NSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
SPVSKGILQ DMWN P+D WDW L+ I+++GVRNSLL+APMPTAST+QILGNNE F
Sbjct: 522 GSPVSKGILQYDMWNKSPTDLWDWNALKKSIAQHGVRNSLLIAPMPTASTAQILGNNESF 581
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EPYTSNIY+RRVLSGEF VVN HLL DLTE+ +W +KN+II GS+Q I IP+E++
Sbjct: 582 EPYTSNIYTRRVLSGEFQVVNHHLLRDLTELDLWDDEMKNQIISSRGSIQNIESIPKEIR 641
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
+YKTVWEI + + MA DRG +IDQSQS NIH+ +PN+ K+TS+HF +W GLKTGMY
Sbjct: 642 DLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMY 701
Query: 757 YLRSRAAADAIKFTV-----------------DTSVFKEKPEKPELVVDDETKMAQVVCS 799
YLR++ AA+AI+FTV +TS+ + P + + ++ E +MA ++CS
Sbjct: 702 YLRTKPAANAIQFTVNKNISVLESNGHSSFEKNTSLEVDNPSESD--IERERRMADMICS 759
Query: 800 LTNREECMACGS 811
L N++ C++CGS
Sbjct: 760 LENKDACLSCGS 771
>gi|256072094|ref|XP_002572372.1| ribonucleoside-diphosphate reductase alpha subunit [Schistosoma
mansoni]
gi|353231859|emb|CCD79214.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Schistosoma mansoni]
Length = 837
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/839 (58%), Positives = 626/839 (74%), Gaps = 50/839 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YVVKRDGR EA+H +KIT R++ + YGL+ + D V+++V +G+Y GVTT +LD LA
Sbjct: 17 IYVVKRDGRNEAIHCEKITKRIRAMCYGLNESYIDVEAVTKRVVSGLYPGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A+M T H +YA LAAR+AVSNLHK TK FS+ ++D+Y + N R+ +PL++ +
Sbjct: 77 AETCASMITKHHEYAILAARLAVSNLHKETKSRFSDVVEDLYCYINPRTKKHSPLVSKSL 136
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ + +NA L+ I Y RD+ Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVSIGIH
Sbjct: 137 RDFVRENAGRLNDAIDYQRDYTYNYFGFKTLERSYLLKINGKVHERPQHMLMRVSIGIHT 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY++MS++WFTHASPTLFNAGTP+PQLSSCFL+ MKDDSIEGIY+TLKECAV
Sbjct: 197 SDIDSAIETYNLMSEKWFTHASPTLFNAGTPKPQLSSCFLITMKDDSIEGIYDTLKECAV 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VHNIR+ G+YI GTNG SNGIVPMLRVFN TARYVDQGG KR GAFA+Y
Sbjct: 257 ISKNAGGIGLNVHNIRSLGTYIAGTNGESNGIVPMLRVFNSTARYVDQGGNKRPGAFAMY 316
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+F+ ++KN G EE RARDLF+ALW+PDLFM RV++N +W+L P+E GL
Sbjct: 317 LEPWHPDVFQFIEMRKNTGAEEIRARDLFFALWIPDLFMRRVESNDKWTLMDPHECPGLP 376
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG +F+ LY YEREG+ ++ V+AQ LW+ I+ QIETG P+ML+KD+CNRKSN Q+L
Sbjct: 377 EVWGEDFDTLYEKYEREGRGRQTVKAQELWYAIIECQIETGNPFMLYKDSCNRKSNHQHL 436
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEI+EY+SP ETAVCNLASI+L +FV N F
Sbjct: 437 GTIRCSNLCTEIVEYSSPDETAVCNLASISLGKFVNR------------------DNLTF 478
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT +VT NLNK+IDV +YPVE ARRSN+RHRPIGIGVQGLAD F LL F+S
Sbjct: 479 DFAKLQEVTKVVTRNLNKVIDVTFYPVEEARRSNMRHRPIGIGVQGLADAFCLLRYPFDS 538
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR--- 597
PEA LNK IFET+Y+ +L S ++A +G YE+Y SPVSKGILQPDMW V +
Sbjct: 539 PEAADLNKRIFETMYFASLDASCQLAVDQGTYESYQGSPVSKGILQPDMWGVDTEELSKV 598
Query: 598 --WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
DW LR I+K G+RNSLL+APMPTASTSQILGNNE EP+TSN++SRRVLSGEF +
Sbjct: 599 SGLDWSGLRARINKYGLRNSLLLAPMPTASTSQILGNNESTEPFTSNVFSRRVLSGEFQI 658
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VN +LL DLT++ +WS +K I+ + GS+Q I IP+ELK +YKTVWEI Q ++DMA
Sbjct: 659 VNPYLLDDLTKLELWSEELKTAIVLNQGSIQHIDGIPKELKPLYKTVWEISQKKIIDMAA 718
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
R +IDQSQSLN+H+ QPN+ K+TS+HF W +GLKTGMYYLR+R AAD IKF+VD ++
Sbjct: 719 GRAPFIDQSQSLNLHLAQPNYGKITSMHFYAWRKGLKTGMYYLRTRPAADPIKFSVDKTI 778
Query: 776 FK---------EKPEKPELVVDDET----------------KMAQVVCSLTNREECMAC 809
+ +P+ + + D+T + + CSL N E C++C
Sbjct: 779 LRVLTDSTTKTNEPQNNDSI--DQTVEAIEELRIIEEIQKRNLDSIACSLNNPEGCLSC 835
>gi|323452424|gb|EGB08298.1| hypothetical protein AURANDRAFT_37557 [Aureococcus anophagefferens]
Length = 793
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/811 (59%), Positives = 619/811 (76%), Gaps = 24/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR+G++E V +DKIT+R++KL YGL ++ P ++QKV GVY GVTT +LDELA
Sbjct: 7 MQVVKRNGKKETVRYDKITSRIQKLCYGLDAKYIKPNQITQKVIQGVYDGVTTHELDELA 66
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI+VSNLHK+T +FS+ ++ ++ H + ++ A LI+D+
Sbjct: 67 AQTTAYMATQHPDFSVLAARISVSNLHKSTDNTFSDVVEKLHKHMHPKTKKPAALISDET 126
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y + K+ +++ I+Y+RDF+YDYFGFKTLERSYL+++ G + ERPQHM+MRV++GIH
Sbjct: 127 YATVQKHKDAINAAIVYERDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+ +A++TY MMSQ+ FTHA+PTLFNAGTPRPQLSSCFL+ MK+DSIEGIY+TLK CA
Sbjct: 187 DDLAAALETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHNIRAT SYI G+NGTSNGIVPMLRV+NDTARYVDQGGG+RKG+FA+Y
Sbjct: 247 ISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRVYNDTARYVDQGGGRRKGSFAIY 306
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +L+LKKNHG E RARDLFY LW+PDLFM+RV+ NG WSL CPNE GLA
Sbjct: 307 LEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGFWSLMCPNECPGLA 366
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC GAEFE LY YE EG+A+K + AQ LWF IL SQ+ETGTPYML+KD CN KSNQ++L
Sbjct: 367 DCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQVETGTPYMLYKDACNDKSNQKHL 426
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYT+ E AVC LASI L V F
Sbjct: 427 GTIKSSNLCTEIVEYTASDEIAVCTLASINLTVHV----------------DGAGDAATF 470
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +VT+NLNK++DVNYYPVE A+ SNL+HRP+GIGVQG+AD L +ES
Sbjct: 471 DFAKLKRTAYVVTKNLNKVVDVNYYPVEEAKSSNLKHRPVGIGVQGMADALAKLRHPYES 530
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A+++N+D+FETIY+ A++ S ++A + GPY++Y SP S+G+ Q D+WNV PSDRWDW
Sbjct: 531 DDAKRINRDVFETIYFGAMEASIDLAQELGPYDSYAGSPTSQGLFQFDLWNVKPSDRWDW 590
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + ++G RNSLL+APMPTAST+QILGNNE FEP+TSN+Y+RRVL+GEF VVNK+L
Sbjct: 591 EGLRARLGEHGCRNSLLLAPMPTASTAQILGNNESFEPFTSNMYTRRVLAGEFAVVNKYL 650
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +G+W+ I+N+II D GSVQ + IP++LK +YKT WEIKQ ++DM+ DRG +
Sbjct: 651 LRDLIALGLWTSEIRNQIIADKGSVQGVLAIPDDLKALYKTTWEIKQKCVLDMSADRGAF 710
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLN+H+ PN K+TS+HF W +GLKTGMYYLR+R ADAI FTVD ++ +
Sbjct: 711 ICQSQSLNLHVADPNPGKLTSMHFYAWKKGLKTGMYYLRTRPKADAIAFTVDQAMAAKSR 770
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
L + + + + EC++CG+
Sbjct: 771 GGAALELANGQEAEE--------HECLSCGA 793
>gi|357612500|gb|EHJ68034.1| hypothetical protein KGM_04264 [Danaus plexippus]
Length = 780
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/811 (61%), Positives = 621/811 (76%), Gaps = 38/811 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDGR E VH DKIT+R+KKL YGL+ + DPV ++ KV +G+Y GVTT +LD LA
Sbjct: 8 LYVLKRDGRMEEVHIDKITSRIKKLCYGLNMDFVDPVSITLKVISGIYSGVTTVELDNLA 67
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT+HPDYA LAAR+A+SNLHK TKK FS+ + D+YN N + ++P+I+D
Sbjct: 68 AETAATMTTDHPDYAILAARLAISNLHKETKKHFSDVMTDLYNIINPYTKKRSPMISDFH 127
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIM N LDS I+YDRDF Y+YFGFKTLERSYLL++ KV ERPQHMLMRV+IGIH
Sbjct: 128 YEIIMNNKDRLDSAIVYDRDFKYNYFGFKTLERSYLLRINNKVAERPQHMLMRVAIGIHD 187
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI TY+++S+++FTHASPTLF+A TPRPQLSSCFL+ MKDDSIEGIY
Sbjct: 188 KDIDAAINTYNLLSEKYFTHASPTLFSAATPRPQLSSCFLIGMKDDSIEGIY-------- 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IG+ +H IRA G+YI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 240 -------IGLHIHCIRAKGTYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 292
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+LKKN GKEE RAR+LFYALW+PDLFM+RV+ N WSL CP+ GL
Sbjct: 293 VEPWHSDIFEFLDLKKNTGKEEVRARELFYALWIPDLFMKRVERNENWSLMCPHNCPGLY 352
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LY YE+E + + V+AQ LW I+ +Q+ETGTPYML+KD CNRKSNQ+NL
Sbjct: 353 DCYGEEFEALYEKYEQENRFVRQVRAQILWKAIIEAQVETGTPYMLYKDACNRKSNQKNL 412
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL FV +N+ F
Sbjct: 413 GTIKCSNLCTEIVEYTSEDEVAVCNLASIALNMFV--------------------ENKKF 452
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT VT+NLNKIIDVN+YPV A+ SN++HRPIGIGVQGLAD F+L+ + +ES
Sbjct: 453 DFKKLKEVTKTVTQNLNKIIDVNFYPVPEAKNSNMKHRPIGIGVQGLADAFVLMRLPYES 512
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A LN+ IFETIYY AL+ S E+A ++G Y TY SP S+GILQ DMWN P+D WDW
Sbjct: 513 EKAILLNQQIFETIYYGALEASCELAERDGVYSTYEGSPASQGILQYDMWNKTPTDLWDW 572
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN HL
Sbjct: 573 AALKEKIAKHGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNHHL 632
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT+ +W +KN II+++GS+Q I IP++++ +YKTVWEI T + MA DRG +
Sbjct: 633 LTDLTQADLWDEEMKNLIIHNNGSIQNIEAIPKDIRDLYKTVWEISVKTTIQMAADRGAF 692
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS NIH+ +PN+ K+TS+HF W GLKTGMYYLR++ AA+AI+FTVD S K
Sbjct: 693 IDQSQSFNIHVAEPNYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKSKVKITN 752
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ DE M+ + CSL N++EC++CGS
Sbjct: 753 GNAQ---KDEASMSMIACSLANKDECLSCGS 780
>gi|20178449|ref|NP_619870.1| CPXV083 protein [Cowpox virus]
gi|20153067|gb|AAM13528.1|AF482758_79 CPXV083 protein [Cowpox virus]
Length = 771
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/790 (62%), Positives = 613/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPYETY S S GILQ D+WNV+PSD WDW
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPPVVCDSE 764
>gi|323454028|gb|EGB09899.1| hypothetical protein AURANDRAFT_24558 [Aureococcus anophagefferens]
Length = 787
Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/811 (59%), Positives = 617/811 (76%), Gaps = 24/811 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR+G++E V +DKIT+R++KL YGL ++ P ++QKV GVY GVTT +LDELA
Sbjct: 1 MQVVKRNGKKETVRYDKITSRIQKLCYGLDAKYIKPNQITQKVIQGVYDGVTTHELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI+VSNLHK+T +FS+ ++ ++ H + ++ A LI+D+
Sbjct: 61 AQTTAYMATQHPDFSVLAARISVSNLHKSTDNTFSDVVEKLHKHMHPKTKKPAALISDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y + K+ +++ I+YDRDF+YDYFGFKTLERSYL+++ G + ERPQHM+MRV++GIH
Sbjct: 121 YATVQKHKDAINAAIVYDRDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+ A +TY MMSQ+ FTHA+PTLFNAGTPRPQLSSCFL+ MK+DSIEGIY+TLK CA
Sbjct: 181 DDLAGAFETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHNIRAT SYI G+NGTSNGIVPMLRV+NDTARYVDQGGG+RKG+FA+Y
Sbjct: 241 ISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRVYNDTARYVDQGGGRRKGSFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +L+LKKNHG E RARDLFY LW+PDLFM+RV+ NG WSL CPNE GLA
Sbjct: 301 LEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGFWSLMCPNECPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC GAEFE LY YE EG+A+K + AQ LWF IL SQ+ETGTPYML+KD CN KSNQ++L
Sbjct: 361 DCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQVETGTPYMLYKDACNDKSNQKHL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYT+ E AVC LASI L V F
Sbjct: 421 GTIKSSNLCTEIVEYTASDEIAVCTLASINLTVHV----------------DGAGDAATF 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +VT+NLNK++DVNYYPVE A+ SNL+HRP+GIGVQG+AD L +ES
Sbjct: 465 DFAKLRRTAYVVTKNLNKVVDVNYYPVEEAKSSNLKHRPVGIGVQGMADALAKLRHPYES 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A+++N+D+FETIY+ A++ S ++A + GPY++Y SP S+G+ Q D+WNV PSDRWDW
Sbjct: 525 DDAKRINRDVFETIYFGAMEASIDLAQELGPYDSYAGSPTSQGLFQFDLWNVKPSDRWDW 584
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + ++G RNSLL+APMPTAST+QILGNNE FEP+TSN+++RRVL+GEF VVNK+L
Sbjct: 585 EGLRARLGEHGCRNSLLLAPMPTASTAQILGNNESFEPFTSNMFTRRVLAGEFAVVNKYL 644
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL +G+W+ I+N+II D GSVQ + IP++LK +YKT WEIKQ ++DM+ DRG +
Sbjct: 645 LRDLIALGLWTSEIRNQIIADKGSVQGVLAIPDDLKALYKTTWEIKQKCVLDMSADRGAF 704
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I QSQSLN+H+ PN K+TS+HF W +GLKTGMYYLR+R ADAI FTVD ++ +
Sbjct: 705 ICQSQSLNLHVADPNPGKLTSMHFYAWKKGLKTGMYYLRTRPKADAIAFTVDQAMAAKSR 764
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
L + ++ + EC++CG+
Sbjct: 765 GGAALEPANGQELEE--------HECLSCGA 787
>gi|325559314|gb|ADZ30689.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/790 (62%), Positives = 613/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPYETY S S GILQ D+WNV+PSD WDW
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPPVVCDSE 764
>gi|90660311|gb|ABD97425.1| ribonucleotide reductase large subunit [Cowpox virus]
Length = 771
Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/790 (62%), Positives = 613/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIIAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|325558889|gb|ADZ30266.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1036 bits (2680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S E+A KEGPYETY S S GILQ D+WNV+PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQIVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|68448942|gb|AAY97064.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|68449144|gb|AAY97265.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|300872688|gb|ADK39090.1| ribonucleotide reductase protein large subunit [Monkeypox virus]
gi|451327749|gb|AGF36621.1| ribonucleotide reductase large subunit [Monkeypox virus]
gi|451327957|gb|AGF36828.1| ribonucleotide reductase large subunit [Monkeypox virus]
gi|451328099|gb|AGF36969.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1036 bits (2680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/790 (62%), Positives = 614/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIA+SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP++V D E
Sbjct: 756 -KPQVVCDSE 764
>gi|325557813|gb|ADZ29195.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1036 bits (2679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPPVVCDSE 764
>gi|325558457|gb|ADZ29836.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 611/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD WDW
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPPVVCDSE 764
>gi|325559101|gb|ADZ30477.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 611/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K ++ A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIINARVIWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFFKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPYETY S S GILQ D+WN++PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNIVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP ++ D E
Sbjct: 756 -KPSMLCDSE 764
>gi|19718013|gb|AAG37538.1| CMP70L [Camelpox virus CMS]
Length = 771
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/790 (62%), Positives = 613/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA +AARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAIIAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHYDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLADTFILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADTFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|15617495|ref|NP_258291.1| RR1 [Spodoptera litura NPV]
gi|15553231|gb|AAL01709.1|AF325155_21 ribonucleotide reductase [Spodoptera litura NPV]
Length = 770
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/777 (62%), Positives = 608/777 (78%), Gaps = 21/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V+KRDGR+EAV KI R++KL YGL +P V+ +V G+Y GVTT++LD L A
Sbjct: 5 HVIKRDGRKEAVFMYKIKCRIEKLCYGLDMNFVNPTSVAVRVDQGIYSGVTTAELDNLIA 64
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAAAMT +H DY+ LAAR+AVSNLHK TK SF + I DMY + ++G+K P+I++ Y
Sbjct: 65 ETAAAMTIDHSDYSLLAARLAVSNLHKETKDSFFDVIIDMYEAIDPKTGVKTPMISNFHY 124
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
II NA L+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRV+IGIH +
Sbjct: 125 NIIAANAYRLNSAIVHDRDFNYDYFGFKTMQRSYLFKINGVTVERPQYMMMRVAIGIHGE 184
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID+AI TY++MS +FTHASPTLF+A TP+ Q+SSCFLV K+DSIEGIY+TLK+CA+I
Sbjct: 185 DIDAAIDTYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVATKEDSIEGIYDTLKQCAMI 244
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKS GGIG VHN+RA GS + G G SNG+VPMLRV+N+TARYVDQGG KR GAFAVYL
Sbjct: 245 SKSGGGIGFHVHNVRAKGSSVAGVGGASNGLVPMLRVYNNTARYVDQGGNKRPGAFAVYL 304
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+ +FL+LKKN GKEE RAR+LFYALW+PDLFM RV+ + WSL CP ++ GLAD
Sbjct: 305 EPWHADVLDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVENDSMWSLMCPMQSPGLAD 364
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
C+GAEF+ LY YE EG+ + V AQ +W I+ SQ+ETGTPYML+KD+CNRKSNQ NLG
Sbjct: 365 CYGAEFDALYQKYEEEGRYVRRVHAQTMWRAIIESQVETGTPYMLYKDSCNRKSNQSNLG 424
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEI+EYTS E AVCNLASIA+ +FV + V +D
Sbjct: 425 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVVQSGV-------------------YD 465
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
FEKL ++T IVT NLN+ ID N+YP+ A+ SNL++RPIGIGVQG+AD F+++ M +ES
Sbjct: 466 FEKLKKITKIVTRNLNRTIDSNWYPLPEAKVSNLKNRPIGIGVQGMADAFVMMRMPYESV 525
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIPSDRWDW 600
A +LNK IFETIYY AL+ S E+AA GPYETY SP S+G+LQ DMW NV PSD WDW
Sbjct: 526 AAAELNKKIFETIYYGALEASCELAAIYGPYETYEGSPASRGVLQYDMWDNVTPSDLWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L+ ISK+G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL
Sbjct: 586 SMLKSKISKHGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DLT +G+W+ TIKN II+++GSVQ+I IP E++ +YKTVWE+ TL++MA DRG +
Sbjct: 646 VKDLTAIGLWNDTIKNLIIHNNGSVQRIESIPLEIRQLYKTVWEMSMRTLINMAADRGAF 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-TSVF 776
IDQSQS N++MD P++ K+TS+HF W GLKTGMYYLR++ AA+AI+FTVD T+ F
Sbjct: 706 IDQSQSFNVYMDLPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKTAAF 762
>gi|294471329|gb|ADE80913.1| RR1 [Spodoptera litura NPV]
Length = 770
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/777 (62%), Positives = 608/777 (78%), Gaps = 21/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
+V+KRDGR+EAV KI R++KL YGL +P V+ +V G+Y GVTT++LD L A
Sbjct: 5 HVIKRDGRKEAVFMYKIKCRIEKLCYGLDMNFVNPTSVAVRVDQGIYSGVTTAELDNLIA 64
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAAAMT +H DY+ LAAR+AVSNLHK TK SF + I DMY + ++G+K P+I++ Y
Sbjct: 65 ETAAAMTIDHSDYSLLAARLAVSNLHKETKDSFFDVIIDMYEAIDPKTGVKTPMISNFHY 124
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
II NA L+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRV+IGIH +
Sbjct: 125 NIIAANAYRLNSAIVHDRDFNYDYFGFKTMQRSYLFKINGVTVERPQYMMMRVAIGIHGE 184
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID+AI TY++MS +FTHASPTLF+A TP+ Q+SSCFLV K+DSIEGIY+TLK+CA+I
Sbjct: 185 DIDAAIDTYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVATKEDSIEGIYDTLKQCAMI 244
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKS GGIG VHN+RA GS + G G SNG+VPMLRV+N+TARYVDQGG KR GAFAVYL
Sbjct: 245 SKSGGGIGFHVHNVRAKGSSVAGVGGASNGLVPMLRVYNNTARYVDQGGNKRPGAFAVYL 304
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+ +FL+LKKN GKEE RAR+LFYALW+PDLFM RV+ + WSL CP ++ GLAD
Sbjct: 305 EPWHADVLDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVENDSMWSLMCPMQSPGLAD 364
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
C+GAEF+ LY YE EG+ + V AQ +W I+ SQ+ETGTPYML+KD+CNRKSNQ NLG
Sbjct: 365 CYGAEFDALYQKYEEEGRYVRRVHAQTMWRAIIESQVETGTPYMLYKDSCNRKSNQSNLG 424
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEI+EYTS E AVCNLASIA+ +FV + V +D
Sbjct: 425 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVLQSGV-------------------YD 465
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
FEKL ++T IVT NLN+ ID N+YP+ A+ SNL++RPIGIGVQG+AD F+++ M +ES
Sbjct: 466 FEKLKKITKIVTRNLNRTIDSNWYPLPEAKVSNLKNRPIGIGVQGMADAFVMMRMPYESV 525
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIPSDRWDW 600
A +LNK IFETIYY AL+ S E+AA GPYETY SP S+G+LQ DMW NV PSD WDW
Sbjct: 526 AAAELNKKIFETIYYGALEASCELAAIYGPYETYEGSPASRGVLQYDMWDNVTPSDLWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L+ ISK+G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL
Sbjct: 586 SMLKSKISKHGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DLT +G+W+ TIKN II+++GSVQ+I IP E++ +YKTVWE+ TL++MA DRG +
Sbjct: 646 VKDLTAIGLWNDTIKNLIIHNNGSVQRIESIPLEIRQLYKTVWEMSMRTLINMAADRGAF 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-TSVF 776
IDQSQS N++MD P++ K+TS+HF W GLKTGMYYLR++ AA+AI+FTVD T+ F
Sbjct: 706 IDQSQSFNVYMDLPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKTAAF 762
>gi|30519447|emb|CAD90622.1| L4L protein [Cowpox virus]
Length = 771
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|207345939|gb|EDZ72594.1| YER070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 732
Score = 1035 bits (2675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/747 (63%), Positives = 597/747 (79%), Gaps = 15/747 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRDGR+E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G AP+I+DD+
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY++MS ++FTHASPTLFNAGTP+PQ+SSCFLV MK+DSIEGIY+TLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE LYT YE+EG+ K ++AQ LW+ IL +Q ETGTP++++KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLC EI+EY++P ETAVCNLAS+ALP F+ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL + F+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIY+ +++ S E+A K+GPYET+ SP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTW 747
IDQS SLN+ + P K+TS+HF W
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGW 732
>gi|373448219|gb|AEY73601.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRRQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|94485925|gb|ABF25031.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 609/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARAVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLASIAL FV + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNNEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|393909613|gb|EFO27839.2| ribonucleoside-diphosphate reductase large subunit [Loa loa]
Length = 1048
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/777 (62%), Positives = 598/777 (76%), Gaps = 19/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKRDGR EAV FDKI R+ KL YGLS + D + +SQKV AG+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
E AA M T HPDYA+LA+RIAVSNLHK T+K FS+ K +YN + +SG PLI+ +I+
Sbjct: 72 EIAADMITKHPDYATLASRIAVSNLHKKTEKLFSKVSKRLYNATHPKSGRHMPLISKNIF 131
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+II NA LDS II++RDF Y YFG KTLERSYLL++ G++ ERPQHMLMRV++GIH D
Sbjct: 132 DIIQNNADILDSAIIHERDFCYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGD 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
+I++A++TY++MS+RWFTHA+PTLFN+GT PQ+SSCFL+ M DDSIEGI+ETLK+CA+I
Sbjct: 192 NIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFDDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNG SNG+VPMLRVFN+ ARYVDQGG KR GAFAVYL
Sbjct: 252 SKSAGGIGLNVHCIRATGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAVYL 311
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADIF+FL L+KN G E R RDLF+ LWVPDLFMERV+ + WSL CP E GL D
Sbjct: 312 EPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKVWSLMCPAECPGLED 371
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG FEKLY YE EG+ +K V A+ LW I+++QIETG PYM++KDTCNRK+NQQNLG
Sbjct: 372 SWGEAFEKLYMQYEEEGRYRKQVPARKLWETIVSTQIETGMPYMVYKDTCNRKTNQQNLG 431
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTE++ Y+S E AVCNLASIAL RFV S FD
Sbjct: 432 TIKCSNLCTEVVLYSSREEIAVCNLASIALSRFV-------------------SSEMTFD 472
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+ L E+T +V NLNK+ID NYYPV A RSN RHRPIGIGVQGLAD FIL+ F S
Sbjct: 473 FKMLREITKVVVRNLNKVIDRNYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 532
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
+A+ LNK IFET+YY AL+ S E+A ++GPYE+Y SPVS+GILQ DMW V P+++WDW
Sbjct: 533 KARDLNKRIFETMYYAALEASCELAMEQGPYESYERSPVSRGILQFDMWGVTPTNQWDWE 592
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+ G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y+R VLSG F V N HL+
Sbjct: 593 TLRKKIAMYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQVFNMHLM 652
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+DL + +W +K +II + GS++ I IP+E++ +YKTVWE+ Q ++DMAVDRG +I
Sbjct: 653 NDLMRLDLWDDDMKLEIIKNKGSIRNIERIPQEIRDLYKTVWEMSQRDIIDMAVDRGAFI 712
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
D SQSLNI + +PN+ +TS+HF W +GLKTGMYYLR+R A DA++FTVD + K+
Sbjct: 713 DHSQSLNIFIARPNYGNITSMHFYGWQKGLKTGMYYLRTRPAVDAVQFTVDKTRLKD 769
>gi|325558674|gb|ADZ30052.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIIAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D G EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 DVCGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WN++PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNIVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQIVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPPVVCDSE 764
>gi|94483909|gb|ABF23025.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484112|gb|ABF23227.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485317|gb|ABF24426.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485520|gb|ABF24628.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487747|gb|ABF26844.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488154|gb|ABF27249.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488354|gb|ABF27448.1| ribonucleotide reductase large subunit [Variola virus]
gi|109726138|gb|ABG45254.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 609/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLASIAL FV + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKQVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|397567645|gb|EJK45703.1| hypothetical protein THAOC_35666, partial [Thalassiosira oceanica]
Length = 872
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/797 (60%), Positives = 609/797 (76%), Gaps = 35/797 (4%)
Query: 37 VLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFS- 95
++SQKV GVY GVTT +LDELAA+TAA+ T HPDYA LAARI VSNLHK T+K FS
Sbjct: 89 AVISQKVIQGVYPGVTTVELDELAAQTAASFATQHPDYAVLAARIEVSNLHKETEKQFSK 148
Query: 96 ----ETIKDMYNHYNE-RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
E D + +Y ++G APL++++++ ++M N LD I++DRDF++DYFGFKT
Sbjct: 149 VRPTEICGDCFRNYTHPKTGEPAPLVSEEVHSVVMANRDVLDGAILHDRDFEFDYFGFKT 208
Query: 151 LERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGT 210
LE+SYLLK+ G++ ERPQH+LMRV++GIH DI+ ++TY+++SQR+FTHA+PTLFNAGT
Sbjct: 209 LEKSYLLKMHGQIAERPQHLLMRVAVGIHMGDIERVLETYNLLSQRFFTHATPTLFNAGT 268
Query: 211 PRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSN 270
P PQ+SSCFL C+++DSI+GIY+TLK CAVISK AGGIG+S+ N+RA+ SYIRGTNGTSN
Sbjct: 269 PNPQMSSCFLTCVREDSIDGIYDTLKNCAVISKYAGGIGLSISNVRASASYIRGTNGTSN 328
Query: 271 GIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFY 330
GIVPMLRVFN+TARYVDQGGGKRKG+ A Y+EPWHADIF FL+L+KNHG E RARDLFY
Sbjct: 329 GIVPMLRVFNNTARYVDQGGGKRKGSIAAYIEPWHADIFAFLDLRKNHGNEMERARDLFY 388
Query: 331 ALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLW 390
ALW+PDLFMERVQTNG W+L CPNE GL CWGAEF+ LY YE EGK +K ++AQ LW
Sbjct: 389 ALWIPDLFMERVQTNGDWTLMCPNECKGLDTCWGAEFKALYEKYEAEGKGRKTIKAQQLW 448
Query: 391 FEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIA 450
F IL SQ+ETGTPYML+KD CN KSNQQNLGTIK SNLCTEI+EYT P E AVCNLASI+
Sbjct: 449 FAILDSQVETGTPYMLYKDHCNGKSNQQNLGTIKCSNLCTEIVEYTCPDEIAVCNLASIS 508
Query: 451 LPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETA 510
L +FV P+ G S FD ++L ++ +VT+NLN++ID N+YPVE A
Sbjct: 509 LSKFVT---------PADGFGGDAS----FDLDQLMYISKVVTKNLNRVIDNNFYPVEEA 555
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG 570
RRSN RHRPIGIGVQGLAD F ++ + FES +A++LNKDIFETIY+ A + S E+A EG
Sbjct: 556 RRSNTRHRPIGIGVQGLADAFQMMKLPFESEQARKLNKDIFETIYFGACEASMELAEAEG 615
Query: 571 PYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQIL 630
YET+ SP S+G LQ DMW V PSDRWDW L++ I+++G+RNSLL+APMPTAST+QIL
Sbjct: 616 HYETFPGSPASEGRLQFDMWGVTPSDRWDWAGLKEKIARHGMRNSLLMAPMPTASTAQIL 675
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPE 690
GNNE EP+TSN+Y+RRVL+GEF VVNKHLL DLT G W+ ++NKII D GS+Q + E
Sbjct: 676 GNNESTEPFTSNMYNRRVLAGEFTVVNKHLLRDLTANGYWTERVRNKIIADGGSIQNVQE 735
Query: 691 IPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRG 750
+P+E++ IYKTVWEI Q ++DMA DRG +I QSQS+N+H+ +PN K+TS+HF W +G
Sbjct: 736 LPKEIRDIYKTVWEIPQRAILDMAADRGAFICQSQSMNVHIGEPNTSKLTSMHFYAWKKG 795
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVFKE-----------KPEKPELVVD--DETKMAQVV 797
LKTGMYYLR+R ADAI+FTV+ + E K E P D+ +A
Sbjct: 796 LKTGMYYLRTRPKADAIQFTVNQEMLAETNNAAEKGKMKKAESPTSASANLDKPTVASKF 855
Query: 798 CSLT---NREECMACGS 811
L + EEC+ CG+
Sbjct: 856 AGLQMKDDEEECLNCGA 872
>gi|113195253|ref|YP_717383.1| ribonucleotide reductase large subunit [Taterapox virus]
gi|90660529|gb|ABD97642.1| ribonucleotide reductase large subunit [Taterapox virus]
Length = 771
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHFPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|373447735|gb|AEY73119.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373449644|gb|AEY75020.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|18640305|ref|NP_570461.1| CMLV071 [Camelpox virus]
gi|18482981|gb|AAL73778.1|AF438165_68 ribonucleotide reductase large subunit [Camelpox virus M-96]
Length = 771
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA +AARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAIIAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHYDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|71027825|ref|XP_763556.1| ribonucleotide-diphosphate reductase large subunit [Theileria parva
strain Muguga]
gi|68350509|gb|EAN31273.1| ribonucleotide-diphosphate reductase large subunit, putative
[Theileria parva]
Length = 898
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/792 (61%), Positives = 605/792 (76%), Gaps = 23/792 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E V FDKI R++KLS GL + D V+Q V G+Y G+ TS+LDELA
Sbjct: 60 MYVINRHGEKEDVSFDKILNRIRKLSLGLHSL-VDAPRVTQSVINGMYTGIRTSELDELA 118
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M HPDY+ LAA I + NLHKNT FSE I+ +++ Y A LI+DD+
Sbjct: 119 AQTCAYMAVTHPDYSRLAANITIDNLHKNTLNDFSEVIRTLHS-YKHVFNTNASLISDDV 177
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+E +M N L++EI Y RDF YDYFGFKTLERSYLLK GK+VERPQHM+MRVS GIH
Sbjct: 178 FEFVMANKDRLNAEIDYSRDFQYDYFGFKTLERSYLLKTNGKIVERPQHMIMRVSAGIHC 237
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ I+TYH+MSQR+FTHA+PTLFNAGT PQ+SSCFL+ M+DDS+ GI+ TL +CA
Sbjct: 238 GDLERTIQTYHLMSQRYFTHATPTLFNAGTRHPQMSSCFLLDMQDDSLAGIFNTLSQCAF 297
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+++H IRA+GSYIRGTNG SNGIVPML++FN TA+YVDQGGGKRKG+FA+Y
Sbjct: 298 ISKSAGGIGLAIHKIRASGSYIRGTNGISNGIVPMLKIFNATAKYVDQGGGKRKGSFAIY 357
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+ L+L+KNHG E+ RARDLFYALW+PDLFM+RV+ N W+L CP+E GL
Sbjct: 358 LEPWHADIFKLLDLRKNHGAEDQRARDLFYALWIPDLFMKRVEANKNWTLMCPDECRGLH 417
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YE++G +K + AQ LWF IL SQIETGTPYML+KD CN KSNQQNL
Sbjct: 418 EVWGDEFERLYTQYEQQGLGRKTIPAQKLWFAILQSQIETGTPYMLYKDACNAKSNQQNL 477
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+++T+ E AVCNLAS+ALP+FV ++ R F
Sbjct: 478 GTIKSSNLCCEIVQFTNKDEVAVCNLASVALPKFV------------------NTQTRTF 519
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+ ++T NLNK+ID NYYPV+ AR SN RHRP+G+GVQGLADTF+L+ FES
Sbjct: 520 DFKKLYEICRVITYNLNKVIDRNYYPVKQARVSNFRHRPMGVGVQGLADTFMLMRYPFES 579
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
EA++LNK IFET+YY L S ++A + G YETY SP SKG+LQ D+W + + WD
Sbjct: 580 DEARELNKRIFETMYYACLSESIDLARQLGTYETYEGSPASKGLLQFDLWGAKVDNSLWD 639
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + ++G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 640 WDKLKADLREHGLRNSLFIAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 699
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL E+G+W+ T+K K+I +GS++ I EIP+ +K +YKTVWEIKQ ++DMA DRG
Sbjct: 700 LLNDLIELGLWNETMKQKLIAYNGSLKHIDEIPQHIKDLYKTVWEIKQKHIIDMAADRGI 759
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV--FK 777
+IDQSQSLNIHM+QP F K+TS+HF W +GLKTG+YYLR++ A DAIKFTVD S+
Sbjct: 760 FIDQSQSLNIHMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTVDASISQLA 819
Query: 778 EKPEKPELVVDD 789
+ KP ++ D
Sbjct: 820 KNRAKPNSIMSD 831
>gi|373447260|gb|AEY72646.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/800 (61%), Positives = 616/800 (77%), Gaps = 32/800 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDETKMAQVVCSL 800
KP +V D E +C+L
Sbjct: 756 -KPLVVCDSE------ICTL 768
>gi|325558243|gb|ADZ29623.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 611/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPYETY S S GILQ D+WN++PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNIVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQIVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPPVVCDSE 764
>gi|62288418|gb|AAX78464.1| unknown [synthetic construct]
Length = 797
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 27 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 86
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 87 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 146
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 147 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 206
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 207 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 266
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 267 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 326
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 327 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 386
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 387 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 446
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 447 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 486
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 487 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 546
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 547 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 606
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 607 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 666
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 667 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 725
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 726 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 781
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 782 -KPPVVCDSE 790
>gi|325558027|gb|ADZ29408.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EE+R RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEYRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPYETY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPPVVCDSE 764
>gi|66275870|ref|YP_232955.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|132611|sp|P12848.1|RIR1_VACCW RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|335666|gb|AAB59806.1| ribonucleotide reductase [Vaccinia virus]
gi|29692179|gb|AAO89352.1| ribonucleotide reductase large subunit [Vaccinia virus WR]
gi|325514088|gb|ADZ24082.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPPVVCDSE 764
>gi|37551518|gb|AAQ93170.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIKTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|9627579|ref|NP_042102.1| hypothetical protein VARVgp058 [Variola virus]
gi|417658|sp|P32984.1|RIR1_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|62335|emb|CAA47558.1| ribonucleotide reductase (large subunit) [Variola virus]
gi|297239|emb|CAA48999.1| K4L [Variola virus]
gi|438976|gb|AAA60806.1| homolog of vaccinia virus CDS I4L (ribonucleotide reductase, large
subunit); putative [Variola major virus]
gi|544814|gb|AAB29605.1| K4L product [variola virus VAR, India-1967, Peptide, 771 aa]
gi|94483704|gb|ABF22821.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484521|gb|ABF23634.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484719|gb|ABF23831.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484917|gb|ABF24028.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485115|gb|ABF24225.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485722|gb|ABF24829.1| ribonucleotide reductase large subunit [Variola virus]
gi|94486126|gb|ABF25231.1| ribonucleotide reductase large subunit [Variola virus]
gi|94486329|gb|ABF25433.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487140|gb|ABF26240.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487342|gb|ABF26441.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487546|gb|ABF26644.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487951|gb|ABF27047.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488554|gb|ABF27647.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488755|gb|ABF27847.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488956|gb|ABF28047.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489155|gb|ABF28245.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489355|gb|ABF28444.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489557|gb|ABF28645.1| ribonucleotide reductase large subunit [Variola virus]
gi|94490166|gb|ABF29251.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724101|gb|ABG43227.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724305|gb|ABG43430.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724712|gb|ABG43835.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724915|gb|ABG44037.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725119|gb|ABG44240.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725324|gb|ABG44444.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725527|gb|ABG44646.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725731|gb|ABG44849.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725934|gb|ABG45051.1| ribonucleotide reductase large subunit [Variola virus]
gi|109726341|gb|ABG45456.1| ribonucleotide reductase large subunit [Variola virus]
gi|109726544|gb|ABG45658.1| ribonucleotide reductase large subunit [Variola virus]
gi|745175|prf||2015436BP K4L gene
Length = 771
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 609/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLASIAL FV + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|94486937|gb|ABF26038.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 609/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLASIAL FV + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASTPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|94486532|gb|ABF25635.1| ribonucleotide reductase large subunit [Variola virus]
gi|94486734|gb|ABF25836.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 609/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMTFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLASIAL FV + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|85001013|ref|XP_955225.1| ribonucleoside-diphosphate reductase large chain [Theileria
annulata strain Ankara]
gi|65303371|emb|CAI75749.1| ribonucleoside-diphosphate reductase large chain, putative
[Theileria annulata]
Length = 891
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/776 (61%), Positives = 599/776 (77%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E V FDKI R++KLS GL + D V+Q V G+Y G+ TS+LDELA
Sbjct: 60 MYVINRHGEKEDVSFDKILNRIRKLSLGLHSL-VDAPRVTQSVINGMYTGIRTSELDELA 118
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M HPDY+ LAA I + NLHKNT FSE I+ +++ Y A LI+DD+
Sbjct: 119 AQTCAYMAVTHPDYSRLAANITIDNLHKNTLNDFSEVIRVLHS-YKHVYNTNASLISDDV 177
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+E +M+N L++EI Y RDF YDYFGFKTLERSYLLK GK+VERPQHM+MRVS GIH
Sbjct: 178 FEFVMENKDRLNAEIDYSRDFQYDYFGFKTLERSYLLKTNGKIVERPQHMIMRVSAGIHC 237
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ I+TYH+MSQR+FTHA+PTLFNAGT PQ+SSCFL+ M+DDS+ GI+ TL +CA
Sbjct: 238 GDLERTIQTYHLMSQRYFTHATPTLFNAGTKHPQMSSCFLLDMQDDSLAGIFNTLSQCAF 297
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+++H IRA+GSYIRGTNG SNGIVPML++FN TA+YVDQGGGKRKG+FA+Y
Sbjct: 298 ISKSAGGIGLAIHKIRASGSYIRGTNGISNGIVPMLKIFNSTAKYVDQGGGKRKGSFAIY 357
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+ L+L+KNHG E+ RARDLFYALW+PDLFM+RV+ N W+L CP+E GL
Sbjct: 358 LEPWHADIFKLLDLRKNHGSEDQRARDLFYALWIPDLFMKRVEANKNWTLMCPDECRGLY 417
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YE++G +K + AQ LWF IL SQIETGTPYML+KD CN KSNQQNL
Sbjct: 418 EVWGDEFERLYTQYEQQGMGRKTIPAQKLWFAILQSQIETGTPYMLYKDACNSKSNQQNL 477
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+++TS E AVCNLAS+ALP+FV ++ R F
Sbjct: 478 GTIKSSNLCCEIVQFTSKDEVAVCNLASVALPKFV------------------NTQTRTF 519
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+ ++T NLNK+ID NYYPV+ AR SN RHRP+G+GVQGLADTF+L+ FES
Sbjct: 520 DFKKLYEICRVITYNLNKVIDRNYYPVKQARASNFRHRPMGVGVQGLADTFMLMRYPFES 579
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
EA++LNK IFET+YY L S ++A + G YE+Y SP SKG+LQ D+W + + WD
Sbjct: 580 DEARELNKRIFETMYYACLSESIDLARQYGTYESYEGSPASKGLLQFDLWGAKVDNSLWD 639
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + ++G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 640 WDKLKADLREHGLRNSLFIAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 699
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL ++G+W+ T+K K+I +GS++ I EIP +K +YKTVWEIKQ ++DMA DRG
Sbjct: 700 LLNDLIDLGLWNETMKQKLIAYNGSLKHIDEIPSHIKELYKTVWEIKQKHIIDMAADRGI 759
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+IDQSQSLNIHM+QP F K+TS+HF W +GLKTG+YYLR++ A DAIKFTVD S+
Sbjct: 760 FIDQSQSLNIHMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTVDASI 815
>gi|132610|sp|P20503.1|RIR1_VACCC RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|56404829|sp|Q76RD8.1|RIR1_VACCA RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|335407|gb|AAA48059.1| putative I4L [Vaccinia virus Copenhagen]
gi|2772697|gb|AAB96436.1| ribonucleotide reductase, large subunit [Vaccinia virus]
gi|38348940|gb|AAR17916.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|44971425|gb|AAS49775.1| RPXV062 [Rabbitpox virus]
gi|47088393|gb|AAT10463.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|56713441|gb|AAW23481.1| ribonucleoside-diphosphate reductase large subunit [Vaccinia virus]
gi|56713725|gb|AAW23763.1| ribonucleoside-diphosphate reductase large subunit [Vaccinia virus]
gi|88900691|gb|ABD57603.1| VACV069 [Vaccinia virus]
gi|90819733|gb|ABD98543.1| VACV-DUKE-081 [Vaccinia virus]
gi|160857955|emb|CAM58243.1| ribonucleotide reductase large subunit [Vaccinia virus Ankara]
gi|167412562|gb|ABZ79996.1| ribonucleotide reductase large subunit [Vaccinia virus GLV-1h68]
gi|373448450|gb|AEY73831.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373448691|gb|AEY74071.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373449403|gb|AEY74780.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|439965920|gb|AGB75794.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|6969720|gb|AAF33932.1| TI4L [Vaccinia virus Tian Tan]
Length = 771
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/790 (62%), Positives = 611/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGFRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|94489757|gb|ABF28844.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/790 (62%), Positives = 609/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLASIAL FV + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A K+GPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKKGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|94484317|gb|ABF23431.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489961|gb|ABF29047.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/790 (62%), Positives = 609/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLASIAL FV + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D +
Sbjct: 756 -KPLVVCDSK 764
>gi|17974978|ref|NP_536492.1| I4L [Monkeypox virus Zaire-96-I-16]
gi|17529845|gb|AAL40523.1|AF380138_65 I4L [Monkeypox virus Zaire-96-I-16]
Length = 771
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIA+SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+G YI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGGYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E L
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPRLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIAQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP++V D E
Sbjct: 756 -KPQVVCDSE 764
>gi|88854118|gb|ABD52536.1| ribonucleotide reductase large subunit M1 [Vaccinia virus]
Length = 771
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/790 (62%), Positives = 612/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PS+ W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSNLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|51342225|gb|AAU01269.1| MPXV-WRAIR059 [Monkeypox virus]
gi|58220529|gb|AAW67817.1| MPXV-SL-059 [Monkeypox virus]
gi|59858865|gb|AAX09160.1| MPXV-COP-059 [Monkeypox virus]
gi|68448741|gb|AAY96864.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|68449343|gb|AAY97463.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|68449543|gb|AAY97662.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/790 (62%), Positives = 613/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIA+SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G +EHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNDEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKCIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP++V D E
Sbjct: 756 -KPQVVCDSE 764
>gi|323098474|gb|ADX22712.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1029 bits (2660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/790 (62%), Positives = 611/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIA+SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YF FKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFXFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG R G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGXXRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR+ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTXPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP++V D E
Sbjct: 756 -KPQVVCDSE 764
>gi|334327874|ref|XP_001363871.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Monodelphis domestica]
Length = 755
Score = 1028 bits (2658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/814 (62%), Positives = 612/814 (75%), Gaps = 62/814 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N + +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPYNSKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDVVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 DDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+FEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+ N WSL CPNE GL
Sbjct: 301 LEPWHLDVFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVENNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL FV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TLEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S E+A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GVLRDMISK---NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
VL++ I+K G+RN +VN
Sbjct: 582 KVLKEKIAKYLDGGIRNE---------------------------------------IVN 602
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
HLL DLTE G+W+ +KN+II +GS+Q IPEIPE+LK +YKTVWEI Q T++ MA DR
Sbjct: 603 PHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAADR 662
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K
Sbjct: 663 GAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLK 722
Query: 778 EKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
EK EK + E A +VCSL NR+EC+ CGS
Sbjct: 723 EK-EKVLKDEEKERNTAAMVCSLENRDECLMCGS 755
>gi|410075974|ref|XP_003955569.1| hypothetical protein KAFR_0B01350 [Kazachstania africana CBS 2517]
gi|372462152|emb|CCF56434.1| hypothetical protein KAFR_0B01350 [Kazachstania africana CBS 2517]
Length = 847
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/775 (59%), Positives = 609/775 (78%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+++LSYGL + D ++Q++ +G+Y+GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARVERLSYGLDPKQVDAARITQRIISGIYEGVTTQELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDY +LAAR+A+SNLHK TKK FS+ + D+YN+ N +G AP+I+ +
Sbjct: 61 AETCAYMTTIHPDYGTLAARLAISNLHKQTKKQFSQVMDDLYNYVNPTTGKHAPVISQRV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+EIIMKN +DS I+YDRD+ ++YFG+KTLERSYLLK+ G+V ERPQH+LMRV+IGIH
Sbjct: 121 HEIIMKNKDVIDSTIVYDRDYKFNYFGYKTLERSYLLKINGQVAERPQHLLMRVAIGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+++A +TY++MS+++F HA+PTLFNAGTPRPQ+SSCFLV MKDDSI+GI+ETLKECA+
Sbjct: 181 DDLEAAFETYNLMSEKYFIHATPTLFNAGTPRPQMSSCFLVSMKDDSIDGIFETLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV VH+IR TGSYI+GTNGTS G++P++ V+N TARYVDQGG +R GA A +
Sbjct: 241 ISKSAGGIGVHVHDIRGTGSYIQGTNGTSKGLMPVVGVYNTTARYVDQGGNRRPGAIAFF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+F+ ++KNHG E++RARDLF ALW+PDLFM+RV+ + +W+LF +EA GL+
Sbjct: 301 LEPWHPDVFDFIEMRKNHGDEKYRARDLFPALWIPDLFMKRVEADTKWTLFSSSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE L+ YEREG+ K ++A+ LW IL +Q ETGTP+M +KD N+KSNQ+NL
Sbjct: 361 DVYGDEFEALFERYEREGRG-KTIKARKLWQAILDAQTETGTPFMCYKDAANQKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EIIEY++P ETAVCNLAS+ LP F+ S +K +
Sbjct: 420 GTIKSSNLCCEIIEYSNPEETAVCNLASVCLPTFIEY--------------SEDNKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+FEKL +++ ++T NLN++ID NYYPV AR+SN++HRPI +GVQGLADTF+LL + FES
Sbjct: 466 NFEKLHKISKVITRNLNRVIDNNYYPVPEARKSNMKHRPIALGVQGLADTFMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA +LNK IFET+Y+ +L+ S E+A +EG YET+ SP S+GILQ D+WN P WDW
Sbjct: 526 DEATKLNKQIFETMYHASLEASCELAQEEGAYETFQGSPASQGILQMDLWNSKPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K G+RNSL +APMPTASTSQI+G NECFEP TSN+Y RR +SGEF +VN +L
Sbjct: 586 ETLRKDIVKYGIRNSLTMAPMPTASTSQIMGFNECFEPVTSNMYQRRTISGEFQIVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW +K +I +GS+Q +P +P+E+K +YKTVWEI Q ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQYLITQNGSIQDLPNVPDEIKELYKTVWEISQKKILDMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D SV
Sbjct: 706 IDQSHSLNLFIRAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQSV 760
>gi|1143665|emb|CAA53832.1| unnamed protein product [Variola virus]
gi|5830619|emb|CAB54658.1| L4L protein [Variola minor virus]
Length = 771
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/790 (61%), Positives = 608/790 (76%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLASIAL FV + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLA FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLAYAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D +
Sbjct: 756 -KPLVVCDSK 764
>gi|109724507|gb|ABG43631.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1027 bits (2656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/790 (62%), Positives = 607/790 (76%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ + +WSL CP+E GL
Sbjct: 301 LEPWHFDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDEEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLASIAL FV + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPLVVCDSE 764
>gi|402591720|gb|EJW85649.1| ribonucleoside-diphosphate reductase [Wuchereria bancrofti]
Length = 813
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/821 (59%), Positives = 614/821 (74%), Gaps = 30/821 (3%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKRDGR EAV FDKI R+ KL YGLS + D + +SQKV AG+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
E AA M T HPDYA+LA+RI VSNLHK T+KSFS+ +YN + +SG PLI+ +++
Sbjct: 72 EIAADMITKHPDYATLASRITVSNLHKKTEKSFSKLSGRLYNATHPKSGRHMPLISKELF 131
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+II NA LDS I+++RD+ Y YFG KTLERSYLL++ G++ ERPQHMLMRV++GIH +
Sbjct: 132 DIIQNNANFLDSAIVHERDYLYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGE 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
+I++A++TY++MS+RWFTHA+PTLFN+GT PQ+SSCFL+ M +DSIEGI+ETLK+CA+I
Sbjct: 192 NIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFEDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRA GS I GTNG SNG+VPMLRVFN+ ARYVDQGG KR GAFA+YL
Sbjct: 252 SKSAGGIGLNVHCIRAAGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAIYL 311
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADIF+FL L+KN G E R RDLF+ LWVPDLFMERV+ + WSL CP E GL D
Sbjct: 312 EPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKIWSLMCPAECPGLED 371
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG FEKLYT YE EG+ +K V A+ LW I+ +QIETG PYM++KDTCNRK+NQQNLG
Sbjct: 372 SWGEAFEKLYTQYEEEGRYRKQVPARKLWETIVFTQIETGVPYMVYKDTCNRKTNQQNLG 431
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTE++ Y+S E AVCNLASIAL RFV + +D
Sbjct: 432 TIKCSNLCTEVVLYSSREEIAVCNLASIALSRFV-------------------TSEMTYD 472
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F L EVT +V +NLNK+ID NYYPV A RSN RHRPIGIGVQGLAD FIL+ F S
Sbjct: 473 FNMLHEVTKVVVKNLNKVIDRNYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 532
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
+A+ LNK IFET+YY AL+ S ++A ++GPYE+Y SP+SKGILQ DMW V P+D+WDW
Sbjct: 533 KARDLNKRIFETMYYAALEASCDLAKEQGPYESYEGSPISKGILQFDMWGVTPTDQWDWE 592
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
+LR+ I+K G+RNS+L+APMPTAST+QILGNNE EPYTSN+Y+R VLSG F + N HL+
Sbjct: 593 ILREKIAKYGIRNSVLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQIFNMHLM 652
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+DL + +W +K +II + GS+Q I IP+E++ +YKTVWE+ Q ++DMA DRG +I
Sbjct: 653 NDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYKTVWEMSQRDIIDMAADRGAFI 712
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE--- 778
DQSQSLNI + +PN+ +TS+HF W +GLKTGMYYLR+R A DA++FTVD + KE
Sbjct: 713 DQSQSLNIFIARPNYGNITSMHFYGWQKGLKTGMYYLRTRPAVDAVQFTVDKTRLKEYDN 772
Query: 779 ------KPEKPELVVDDETKMAQVV--CSLTNREECMACGS 811
+K+A V C+L+ +EC+ C S
Sbjct: 773 INADKNSKSSSSSTPATTSKLATKVMECTLSTGDECLMCSS 813
>gi|443922933|gb|ELU42275.1| ribonucleoside-diphosphate reductase large chain [Rhizoctonia
solani AG-1 IA]
Length = 987
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/787 (62%), Positives = 601/787 (76%), Gaps = 39/787 (4%)
Query: 9 RQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMT 68
R+E V FDKITAR+ KL YGL H DP+ V++KV AGVY GVTT +LD LA+ETAA +T
Sbjct: 74 RKERVAFDKITARITKLCYGLDRNHVDPIEVTKKVIAGVYAGVTTVELDNLASETAAYLT 133
Query: 69 TNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNA 128
T HPDYA LAARIA+SNLHK T+K+FS I D+YN+ N ++G A +I+ + YEI+ +NA
Sbjct: 134 TKHPDYAILAARIAISNLHKETRKNFSAVIADLYNYVNPKNGRPAGMISKETYEIVQENA 193
Query: 129 ACLDSEIIYDRDFDYDY-----------------FGFKTLERSYLLKVQGKVVERPQHML 171
A LDS +IY+RDF Y+ FGFKTLERSYLL++ G+V ERPQHML
Sbjct: 194 AALDSAMIYERDFHYNLWGNFNLLIWYFTKTLISFGFKTLERSYLLRINGRVAERPQHML 253
Query: 172 MRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGI 231
MRV++GIH +ID AI+TY++MS+R+FTHASPTLFNAGTP PQLSSCFLV MKDDSI+GI
Sbjct: 254 MRVAVGIHGRNIDRAIETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVAMKDDSIDGI 313
Query: 232 YETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGG 291
Y+TLK CA+ISK+AGGIG+ +HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG
Sbjct: 314 YDTLKTCAMISKTAGGIGLHIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGN 373
Query: 292 KRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLF 351
KR GAFA+YLEPWHAD+FEFL+L+KNHGKEE RARDLFYALW+PDLFM+R++ +G W+LF
Sbjct: 374 KRPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMQRIEEDGDWTLF 433
Query: 352 CPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTC 411
CPNEA GLAD GA F +LYT YE+EG+ +K ++AQ LW+ IL +QIETG P+ML+KD
Sbjct: 434 CPNEAPGLADVHGAAFVELYTKYEKEGRGRKTIKAQKLWYAILDAQIETGGPFMLYKDAA 493
Query: 412 NRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVG 471
N KSNQQNLGTIKSSNLCTEIIEY++P E AVCNLASIALP F+ P H R
Sbjct: 494 NAKSNQQNLGTIKSSNLCTEIIEYSAPDEVAVCNLASIALPTFIVND--PAAPHGKR--- 548
Query: 472 SRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
+DF+KL EVT +V NLN IIDVNYYPV AR SN+RHRPIGIGVQGLAD F
Sbjct: 549 --------YDFKKLHEVTKVVANNLNTIIDVNYYPVPEARNSNMRHRPIGIGVQGLADAF 600
Query: 532 ILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN 591
+ L M FESPEA++LN IFETIY+ A++ S E+A +GPY T+ SP S+G LQ D+W
Sbjct: 601 MCLKMPFESPEARELNLLIFETIYHAAVEASVEMAEAQGPYSTFQGSPASQGKLQFDLWG 660
Query: 592 VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
V PS W+W L+ + + G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+G
Sbjct: 661 VTPSGLWEWEDLKAKVVRTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAG 720
Query: 652 EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLV 711
EF VV LL DL +G+W +KN II GS+Q I IP+++K IYKTVWEI Q T++
Sbjct: 721 EFQVVCPWLLRDLVSLGLWDDDMKNMII-ASGSIQNINGIPDDIKAIYKTVWEISQKTVL 779
Query: 712 DMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++A DRG +I QSQSLN+H+ PN +++ R +S YLR+R AA AI+FTV
Sbjct: 780 NLAADRGAFICQSQSLNVHLQSPNARQLLPNLTRQFS--------YLRTRPAAQAIQFTV 831
Query: 772 DTSVFKE 778
D SV K+
Sbjct: 832 DQSVIKQ 838
>gi|323098671|gb|ADX22908.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/790 (61%), Positives = 609/790 (77%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIA+SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YF FKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFXFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG R G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGXXRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD F LL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFXLLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR+ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTXPASAPIQFTLD----KDK- 754
Query: 781 EKPELVVDDE 790
P++V D E
Sbjct: 755 XXPQVVCDSE 764
>gi|373447978|gb|AEY73361.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 769
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/790 (62%), Positives = 610/790 (77%), Gaps = 28/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFET Y AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDLNKKIFET--YGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 578
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 579 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 638
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 639 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 697
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 698 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 753
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 754 -KPLVVCDSE 762
>gi|426367047|ref|XP_004050549.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Gorilla gorilla gorilla]
Length = 757
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/811 (62%), Positives = 614/811 (75%), Gaps = 54/811 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+KN G + F + +VN HL
Sbjct: 582 KLLKEKIAKNN-------------------GFWKSF----------------WRIVNPHL 606
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 607 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 666
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 667 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 726
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 727 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 757
>gi|428671726|gb|EKX72641.1| ribonucleoside-diphosphate reductase large chain, putative [Babesia
equi]
Length = 857
Score = 1021 bits (2641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/794 (60%), Positives = 602/794 (75%), Gaps = 21/794 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E V FD+I R++KLS GL + D V+Q V G+Y G+ TSQLDELA
Sbjct: 47 MYVINRRGEKEDVSFDRILNRIRKLSAGLHS-LVDAPRVTQSVINGMYTGIHTSQLDELA 105
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M HPDY+ LAA I V NLHKNT FSE ++ +Y Y A +I+ D+
Sbjct: 106 AQTCAYMAVTHPDYSRLAANITVDNLHKNTSDDFSEVVRTLY-EYKHVYNTNASMISYDV 164
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y IM+N L++EI Y RDF YDYFGFKTLERSYLL+ K+VERPQHMLMRVS GIH
Sbjct: 165 YNFIMENKDRLNAEIDYSRDFQYDYFGFKTLERSYLLRANNKIVERPQHMLMRVSAGIHC 224
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ ++TYH+MSQ++FTHA+PTLFN+GT RPQ+SSCFL+ M+DDS+ GI+ TL +CA
Sbjct: 225 GDVERTVETYHLMSQKFFTHATPTLFNSGTNRPQMSSCFLLDMQDDSLAGIFNTLTQCAF 284
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+++H IRA+GSYIRGTNG SNGIVPMLR+FN TA+YVDQGGGKR+G+FA+Y
Sbjct: 285 ISKSAGGIGLAIHKIRASGSYIRGTNGQSNGIVPMLRIFNTTAKYVDQGGGKRRGSFAIY 344
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+ L+L+KNHG E+ RARDLFYALW+PDLFM+RV+ N W+L CP+E GL
Sbjct: 345 LEPWHADIFKMLDLRKNHGSEDLRARDLFYALWIPDLFMKRVEANENWTLMCPDECRGLY 404
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE LYT YE+ G +K + AQ LWF IL SQIETGTPYML+KD CN KSNQ+NL
Sbjct: 405 EVWGDEFEALYTKYEQAGMGRKTIPAQKLWFAILQSQIETGTPYMLYKDACNAKSNQKNL 464
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI++YT E AVCNLASIALP FV +++ + F
Sbjct: 465 GTIKSSNLCCEIVQYTDSKEVAVCNLASIALPMFVNKEE------------------KTF 506
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL ++ ++T NLN+IID NYYPV+ AR SN RHRPIG+GVQGLADTF+LL FES
Sbjct: 507 DFKKLYKIARVITYNLNQIIDRNYYPVKEARYSNFRHRPIGVGVQGLADTFMLLRYPFES 566
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
EA++LNK IFETIYY L S +A K G YE+Y SP S+G+LQ D+W + + WD
Sbjct: 567 DEARELNKRIFETIYYACLDESISLAEKHGHYESYPGSPASQGLLQFDLWGAKVDNKLWD 626
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + K+G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 627 WDDLKARMKKHGLRNSLFLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 686
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL ++G+W+ T+K K+I +GS++ I EIP+ +K +YKTVWEIKQ T++DMA DRG
Sbjct: 687 LLNDLVDLGLWNETMKQKLIAYNGSLRHIEEIPQHIKELYKTVWEIKQKTIIDMAADRGI 746
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+IDQSQSLNI+M+QP F K+TS+HF W +GLKTG+YYLR++ A DAIKFT+D+++ +
Sbjct: 747 FIDQSQSLNIYMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTIDSNIAQAA 806
Query: 780 PEKPELVVDDETKM 793
K +L D + M
Sbjct: 807 KAKNKLSTDMQPSM 820
>gi|403222932|dbj|BAM41063.1| ribonucleoside-diphosphate reductase large chain [Theileria
orientalis strain Shintoku]
Length = 877
Score = 1021 bits (2641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/776 (61%), Positives = 595/776 (76%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E V FDKI R++KLS GL D V+Q V G+Y G+ TS+LDELA
Sbjct: 50 MYVINRHGEKEDVSFDKILNRIRKLSLGLHA-LVDAPRVTQSVINGMYTGIRTSELDELA 108
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M HPDY+ LAA I + NLHKNT F+E ++ ++ Y A LI++D+
Sbjct: 109 AQTCAYMAVTHPDYSRLAANITIDNLHKNTSSDFAEVVRTLF-EYKHVYDSNASLISEDV 167
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y +M + ++EI Y RDF YDYFGFKTLERSYLLK GK+VERPQHMLMRVS GIH
Sbjct: 168 YNFVMMHKDRFNAEIDYSRDFQYDYFGFKTLERSYLLKANGKIVERPQHMLMRVSAGIHC 227
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+ ++TYH+MSQR+FTHA+PTLFN+GT PQ+SSCFL+ M+DDS+ GI+ TL +CA
Sbjct: 228 GDIERTLQTYHLMSQRYFTHATPTLFNSGTRHPQMSSCFLLDMQDDSLAGIFNTLSQCAF 287
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H IRA+GSYIRGTNG SNGIVPML++FN TA+YVDQGGGKRKG+FA+Y
Sbjct: 288 ISKSAGGIGLSIHKIRASGSYIRGTNGISNGIVPMLKIFNATAKYVDQGGGKRKGSFAIY 347
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+ L+L+KNHG E+ RARDLFYALW+PDLFM+RV+ N W+L CP+E GL
Sbjct: 348 LEPWHADIFKLLDLRKNHGSEDLRARDLFYALWIPDLFMKRVEENKNWTLMCPDECRGLY 407
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLYTHYE++G KK V AQ LWF IL SQIETGTPYML+KD CN KSNQQNL
Sbjct: 408 EVWGEEFEKLYTHYEQQGMGKKTVPAQKLWFAILQSQIETGTPYMLYKDACNAKSNQQNL 467
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI++YTS E AVCNLAS+ALP+FV + + + F
Sbjct: 468 GTIKSSNLCCEIVQYTSKDEVAVCNLASVALPKFVDK------------------EKKTF 509
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL ++ ++T NLN++ID NYYPV AR SN +HRP+G+GVQGLADTF+L+ FES
Sbjct: 510 DFKKLYDICRVITYNLNQVIDRNYYPVREARVSNFKHRPMGVGVQGLADTFMLMRYPFES 569
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
EA++LN+ IFET+YY L S ++A + G YE+Y SP SKG+LQ D+W + + WD
Sbjct: 570 EEARELNRRIFETMYYACLSESIDLARQYGTYESYPGSPASKGLLQFDLWGAKVDNKYWD 629
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W +L+ ++K G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVL GEF VVN H
Sbjct: 630 WDLLKQNLAKYGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLCGEFFVVNPH 689
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL E+G+W+ +K K+I +GS++ I E+P+ +K +YKTVWEIKQ ++DMA DRG
Sbjct: 690 LLNDLIELGLWNENMKQKLIAYNGSLKYIDEVPQHIKDLYKTVWEIKQKHIIDMAADRGV 749
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+IDQSQSLNIHM+QP F K+TS+HF W +GLKTG+YYLR++ A DAIKFTVD SV
Sbjct: 750 FIDQSQSLNIHMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTVDASV 805
>gi|164659252|ref|XP_001730750.1| hypothetical protein MGL_1749 [Malassezia globosa CBS 7966]
gi|159104648|gb|EDP43536.1| hypothetical protein MGL_1749 [Malassezia globosa CBS 7966]
Length = 850
Score = 1021 bits (2641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/744 (64%), Positives = 601/744 (80%), Gaps = 16/744 (2%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP+ +++KV G+Y+GVTT +LD LAAETAA TT HPDYA LAARIA+SNLHK TKKSF
Sbjct: 5 DPIEITRKVIDGIYEGVTTVELDNLAAETAAYKTTTHPDYAVLAARIAISNLHKETKKSF 64
Query: 95 SETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERS 154
S+ I+D++++ N ++G + +I+++ + +MK+ LDS IIY+RDF Y++FGFKTLERS
Sbjct: 65 SQVIQDLHDYVNPKTGRPSSMISEETFNTVMKHRELLDSAIIYERDFHYNFFGFKTLERS 124
Query: 155 YLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQ 214
YLL++ GKV ERPQHMLMRV++GIH +DI+SAI+TY+ MS++ FTHASPTLFNAGTP PQ
Sbjct: 125 YLLRINGKVAERPQHMLMRVAVGIHGEDIESAIETYNYMSEKAFTHASPTLFNAGTPNPQ 184
Query: 215 LSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVP 274
+SSCFLV MK+DSIEGIY+TLK CA+ISK+AGGIG+++HNIR TGSYI GTNG SNGIVP
Sbjct: 185 MSSCFLVSMKEDSIEGIYDTLKTCAMISKTAGGIGLNIHNIRGTGSYIAGTNGVSNGIVP 244
Query: 275 MLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWV 334
MLRVFN+TARYVDQGG KR GAFA+YLEPWH D+FEF++L+KNHGK+E RARDLF A+WV
Sbjct: 245 MLRVFNNTARYVDQGGNKRPGAFAIYLEPWHPDVFEFVDLRKNHGKDEVRARDLFLAMWV 304
Query: 335 PDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEIL 394
PDLFM+RV+ N WSL CP EA GLADC+G EFE+LY YEREG+AK+ V+AQ LW+ IL
Sbjct: 305 PDLFMKRVEKNEDWSLMCPAEAPGLADCYGEEFEELYERYEREGRAKRSVKAQKLWYAIL 364
Query: 395 TSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRF 454
+QIETG P+ML+KD NRKSNQ+NLGTIKSSNLCTEI+EY+SP ETAVCNLASIALP F
Sbjct: 365 EAQIETGNPFMLYKDAANRKSNQKNLGTIKSSNLCTEIMEYSSPEETAVCNLASIALPTF 424
Query: 455 VREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSN 514
+ G+ SK ++F++L +V +V +NLN+IID+NYYPV +ARRSN
Sbjct: 425 IE--------------GTGASK--IYNFQRLHDVAKVVCKNLNRIIDINYYPVPSARRSN 468
Query: 515 LRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYET 574
+RHRPIGIGVQGLAD F+++G F+S EA++LN IFETIY+ AL+ S E+A + G YET
Sbjct: 469 MRHRPIGIGVQGLADAFMIMGYPFDSQEARRLNLQIFETIYHAALERSCELAEQYGTYET 528
Query: 575 YHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
Y SP S+GILQ DMWN P+D WDW L+ I+++G+RNSLL+APMPTASTSQILG NE
Sbjct: 529 YQGSPASQGILQYDMWNRTPTDLWDWASLKAKIAQHGLRNSLLLAPMPTASTSQILGFNE 588
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
CFEPYT+NIY RRVL+GEF VVN LL +L E+G+W+ ++K KII GS+Q IP IP+
Sbjct: 589 CFEPYTNNIYMRRVLAGEFQVVNPWLLRELVELGLWNDSMKQKIIAHGGSIQNIPGIPDH 648
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
+K +YKTVWEI Q ++DMA DRG ++ QSQSLNIH+ P+F ++TS+HF W +GLKTG
Sbjct: 649 IKALYKTVWEISQKVIIDMAADRGAFVCQSQSLNIHLSAPSFGQLTSMHFYGWKKGLKTG 708
Query: 755 MYYLRSRAAADAIKFTVDTSVFKE 778
YYLR+R AA AI+FTV E
Sbjct: 709 SYYLRTRPAASAIQFTVSNEEIAE 732
>gi|156083304|ref|XP_001609136.1| ribonucleoside-diphosphate reductase large chain [Babesia bovis
T2Bo]
gi|154796386|gb|EDO05568.1| ribonucleoside-diphosphate reductase large chain [Babesia bovis]
Length = 838
Score = 1021 bits (2641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/776 (61%), Positives = 595/776 (76%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+ R G E VHFD+I R++KLS+GL + D V+Q V G+Y G+ TSQLDELA
Sbjct: 28 MFVINRKGESEEVHFDRILERIRKLSFGLHS-LVDAPRVTQSVINGMYSGIRTSQLDELA 86
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M HPDY+ LAARI V NLHKNT ++++ I ++ Y A LI++++
Sbjct: 87 AQTCAYMAATHPDYSKLAARIVVDNLHKNTLDNYADVITALFK-YKYIYDSNASLISEEV 145
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ IM N +++EI Y RDF YDYFG KTLERSYLL++ K+VERPQHMLMRVS GIH
Sbjct: 146 YDFIMANIDRINAEIDYSRDFQYDYFGLKTLERSYLLRINDKIVERPQHMLMRVSAGIHT 205
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+ I+TYH+MSQ++FTHA+PTLF +GTPRPQ+SSCFL+ MKDDS+ GI+ETL +CA
Sbjct: 206 GDIERTIQTYHLMSQKYFTHATPTLFFSGTPRPQMSSCFLLDMKDDSLAGIFETLTQCAF 265
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++ H IRA+G+YIRGTNG SNG+VPMLR+FN TARYVDQGGGKRKG+FA+Y
Sbjct: 266 ISKCAGGIGLACHKIRASGAYIRGTNGKSNGLVPMLRIFNSTARYVDQGGGKRKGSFAIY 325
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL+L+KNHG EE RARDLFYALW+PDLFM+RV++NG W+L CP+E GL
Sbjct: 326 LEPWHADIMDFLDLRKNHGAEEARARDLFYALWIPDLFMKRVESNGDWTLMCPDECRGLY 385
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EFE LYT YE EG +K + AQ LWF IL SQIETG P+ML+KD CN KSNQQNL
Sbjct: 386 DVWGDEFEALYTKYEMEGLGRKTIPAQTLWFAILQSQIETGNPFMLYKDACNAKSNQQNL 445
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI++YTSP E AVCNLASIALP +V + +N+ +
Sbjct: 446 GTIKSSNLCCEIVQYTSPEEVAVCNLASIALPMYVDK------------------ENKTY 487
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +V ++T NLNK+ID NYYPV A+ SN RHRPIG+GVQGLADTF+L+ FES
Sbjct: 488 DFKKLYDVARVITYNLNKVIDRNYYPVPEAKVSNHRHRPIGVGVQGLADTFMLMRYPFES 547
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-WD 599
EA++LN+ IFETIYY L S +A K G YE+Y SP S+G LQ D+W ++ WD
Sbjct: 548 EEAKELNRRIFETIYYGCLDESISLAEKYGTYESYPGSPASQGKLQFDLWGATVDNKLWD 607
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ ++K+G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 608 WDGLKQRMAKHGLRNSLFLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 667
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL ++G+W +K K+I +GS++ I IP+ +K +YKTVWEIKQ +++DMA DRG
Sbjct: 668 LLRDLVDLGLWDDAMKEKLIAYNGSLRHIEGIPQHIKDLYKTVWEIKQKSIIDMAADRGI 727
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+IDQSQSLNI++DQP F K+TS+HF W +GLKTG YYLR++AA DAIKFTVDTSV
Sbjct: 728 FIDQSQSLNIYLDQPTFGKLTSMHFYGWKKGLKTGTYYLRTQAATDAIKFTVDTSV 783
>gi|340504856|gb|EGR31263.1| ribonucleoside-diphosphate large, putative [Ichthyophthirius
multifiliis]
Length = 804
Score = 1019 bits (2635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/819 (60%), Positives = 613/819 (74%), Gaps = 62/819 (7%)
Query: 38 LVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSET 97
L+ QKV G+Y+GV T+ LDEL+AET A M HP Y+ LAARIAVSNLHK TK++F ET
Sbjct: 3 LIIQKVVKGMYQGVHTTTLDELSAETCAYMNIIHPHYSLLAARIAVSNLHKETKETFVET 62
Query: 98 IKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLL 157
I+D+YN Y + KA LIADD+Y+I+++NA + +I Y+RD+ YD+FGFKTLERSYLL
Sbjct: 63 IQDLYN-YKDNQNRKASLIADDVYQIVIENADLIQQQINYERDYTYDFFGFKTLERSYLL 121
Query: 158 KVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSS 217
K+ GK+VERPQ MLMRVSIGIHK D+ SA +TY++MS++WFTHA+PTLFNAG+P PQ+SS
Sbjct: 122 KIHGKIVERPQTMLMRVSIGIHKRDLQSAFRTYNLMSEKWFTHATPTLFNAGSPNPQMSS 181
Query: 218 CFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ M+ DSIEGIY+TLK+CA+ISKSAGGIGVSVHNIR+ SYIRGTNG SNGI+PML+
Sbjct: 182 CFLLTMQSDSIEGIYDTLKQCALISKSAGGIGVSVHNIRSQDSYIRGTNGHSNGIIPMLK 241
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDL 337
VFNDTARYVDQGGGKRKG+FA+YLEPWHAD+F+FL LKKNHGKEE RARDLFYALW+PD+
Sbjct: 242 VFNDTARYVDQGGGKRKGSFAIYLEPWHADVFDFLQLKKNHGKEEQRARDLFYALWIPDI 301
Query: 338 FMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQ 397
FM RV + W+L CPNE GL D WG EFEKLY YEREGK +K ++A+ LW +I+ SQ
Sbjct: 302 FMRRVIADEHWTLMCPNECLGLPDVWGEEFEKLYEKYEREGKGRKRIKARELWQDIIDSQ 361
Query: 398 IETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVRE 457
IETGTPYML+KD CNRKSNQQNLGTI+SSNLCTEIIEYTSP E AVCNLASI+L +FV E
Sbjct: 362 IETGTPYMLYKDACNRKSNQQNLGTIRSSNLCTEIIEYTSPDEIAVCNLASISLQKFVVE 421
Query: 458 KDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
+ +N +F++ KL E++ IVT NLN++ID NYYPV AR SN++H
Sbjct: 422 DN----------------ENSYFEYNKLYEISKIVTFNLNRVIDENYYPVPQARLSNMKH 465
Query: 518 RPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHN 577
RPIGIGVQGLAD F+ L ++FES +A ++N+ IFETIYY A + S E+A K+G Y ++
Sbjct: 466 RPIGIGVQGLADAFMKLKVSFESEKALEINEKIFETIYYGACEASMELAIKDGCYASFVG 525
Query: 578 SPVSKGILQPDMWNVIPSD-RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
SP S+G LQ D+WN P +DW L+ I K G+RNSLL+APMPTASTSQILGN E F
Sbjct: 526 SPASQGKLQFDLWNYKPHKCGYDWDSLKSKIQKYGMRNSLLIAPMPTASTSQILGNCESF 585
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EPYTSN+Y+RRVL+GEFV VN HL+ DL ++ W+P++KN+++ +GSVQ+I EIPE LK
Sbjct: 586 EPYTSNLYTRRVLAGEFVCVNPHLVQDLIKINQWTPSVKNQLLAYNGSVQQIQEIPESLK 645
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
IYKTVWE+ Q ++++A+ R +IDQSQSLNIH+ +P++ K+TS+HF W +GLKTGMY
Sbjct: 646 DIYKTVWEVSQKAIINLALSRSPFIDQSQSLNIHISEPSYSKMTSMHFYAWEKGLKTGMY 705
Query: 757 YLRSRAAADAIKFTVDT----------SVFKEKPEK------PELVVDDETKMAQV---- 796
YLRSR AAD IKFT+D V K +K PE +D K ++
Sbjct: 706 YLRSRPAADPIKFTLDVESLLKNAGDIQVQKNNKQKELDENNPEKFSEDPIKKLKIDEKE 765
Query: 797 ------------VCSLT------------NREECMACGS 811
VC L + EEC ACGS
Sbjct: 766 NIQLNTQQPEDQVCPLRKKKKNSKGKWEYDDEECFACGS 804
>gi|170579939|ref|XP_001895047.1| ribonucleoside-diphosphate reductase large chain [Brugia malayi]
gi|158598142|gb|EDP36102.1| ribonucleoside-diphosphate reductase large chain, putative [Brugia
malayi]
Length = 1061
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/786 (60%), Positives = 601/786 (76%), Gaps = 28/786 (3%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKRDGR EAV FDKI R+ KL YGLS + D + +SQKV AG+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
E AA M T HPDYA+LA+RI VSNLHK T+KSFS+ + +YN + +SG PLI+ +++
Sbjct: 72 EIAADMITKHPDYATLASRITVSNLHKKTEKSFSKLSRRLYNATHPKSGRHMPLISKELF 131
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+II NA LDS I+++RD+ Y YFG KTLERSYLL++ G++ ERPQHMLMRV++GIH +
Sbjct: 132 DIIQNNANLLDSAIVHERDYLYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGE 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI++A++TY++MS+RWFTHA+PTLFN+GT PQ+SSCFL+ M +DSIEGI+ETLK+CA+I
Sbjct: 192 DIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFEDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRA+GS I GTNG SNG+VPMLRVFN+ ARYVDQGG KR GAFAVYL
Sbjct: 252 SKSAGGIGLNVHCIRASGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAVYL 311
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADIF+FL L+KN G E R RDLF+ LWVPDLFMERV+ + WSL CP E GL D
Sbjct: 312 EPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKIWSLMCPAECPGLED 371
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG FEKLYT YE EG+ +K V A+ LW I+ +QIETG PYM++KDTCNRK+NQQNLG
Sbjct: 372 SWGEAFEKLYTQYEEEGRYRKQVPARKLWETIVFTQIETGMPYMVYKDTCNRKTNQQNLG 431
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTE++ Y+S E AVCNLASIAL RFV + +D
Sbjct: 432 TIKCSNLCTEVVLYSSREEIAVCNLASIALGRFV-------------------TSEMKYD 472
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+ L EVT +V +NLNK+ID NYYP+ A RSN RHRPIGIGVQGLAD FIL+ F S
Sbjct: 473 FKMLHEVTKVVVKNLNKVIDRNYYPIPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 532
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
+A+ LNK IFETIYY AL+ S ++A ++GPYE+Y SP+SKGILQ DMW V P+D+ DWG
Sbjct: 533 KARDLNKRIFETIYYAALEASCDLAKEQGPYESYEGSPISKGILQFDMWGVTPTDQCDWG 592
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR+ I+K G+RNS+L++PMPTAST+QILGNNE EPYTSN+Y+R VLSG F + N HL+
Sbjct: 593 TLREKIAKFGIRNSVLLSPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQIFNMHLM 652
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+DL + +W +K +II + GS+Q I IP+E++ +Y+TVWE+ Q ++DMA DRG +I
Sbjct: 653 NDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYRTVWEMSQRDIIDMAADRGAFI 712
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWS---------RGLKTGMYYLRSRAAADAIKFTVD 772
DQSQSLNI + +PN+ +TS+HF W +GLKTGMYYLR+R A DA++FTVD
Sbjct: 713 DQSQSLNIFIARPNYGNITSMHFYGWQKVCTAFLMYKGLKTGMYYLRTRPAVDAVQFTVD 772
Query: 773 TSVFKE 778
+ KE
Sbjct: 773 KTRLKE 778
>gi|237841871|ref|XP_002370233.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii ME49]
gi|211967897|gb|EEB03093.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii ME49]
gi|221482702|gb|EEE21040.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii GT1]
gi|221503104|gb|EEE28810.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii VEG]
Length = 877
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/776 (61%), Positives = 606/776 (78%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVV R G +E V FD+I R++KLS+GL DP V+Q V G+Y G+ TS+LD+LA
Sbjct: 60 MYVVNRRGEEEPVSFDQILKRIEKLSFGLHP-LVDPARVAQAVINGMYAGIRTSELDDLA 118
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T+A M +HPD++ LAARIA+ NLHKNT +F T+ D + Y ++ G +A L++ ++
Sbjct: 119 AQTSAYMAASHPDFSRLAARIAIDNLHKNTTDNFL-TVIDQLHGYVDKLGREAKLVSTEV 177
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE + +N L+ + Y RDFDYDYFGFKTLERSYLLK+ ++VERPQHMLMRV+ GIH
Sbjct: 178 YEFVRENEQALNEALNYSRDFDYDYFGFKTLERSYLLKIHDRIVERPQHMLMRVACGIHC 237
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ AI+TY +MSQ++FTHA+PTLFNAGTPRPQ+SSCFL+ M++DSI+GI+ TLK+CA+
Sbjct: 238 GDVEKAIETYELMSQKFFTHATPTLFNAGTPRPQMSSCFLLTMQEDSIDGIFSTLKQCAL 297
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++V +IRAT SYIRGTNG SNG++PMLRVFND ARYVDQGGGKRKG+ A+Y
Sbjct: 298 ISKTAGGLGLAVTDIRATNSYIRGTNGYSNGLLPMLRVFNDAARYVDQGGGKRKGSLAIY 357
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL++KKNHGKEE RARDLF ALW+PDLFMERV N W+L CPNE GL
Sbjct: 358 LEPWHFDVFDFLDIKKNHGKEERRARDLFCALWIPDLFMERVNDNAGWTLMCPNECPGLT 417
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EF++LY YEREG+ +K + AQ+LWF IL +QIETGTPYML+KD CNRKSNQ+NL
Sbjct: 418 EVWGDEFKELYERYEREGRGRKTIPAQHLWFAILQAQIETGTPYMLYKDACNRKSNQKNL 477
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTE++EYTS E AVCNLAS++LP+FV ++R F
Sbjct: 478 GTIKCSNLCTEVVEYTSKDEVAVCNLASVSLPKFVDR------------------ESRTF 519
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+E L + ++T NLN++ID NYYPV A++SNLRHRP+G+GVQGLAD F+LL F+S
Sbjct: 520 DYEHLKRIVKVMTRNLNRVIDRNYYPVPEAKKSNLRHRPVGLGVQGLADAFMLLRYPFDS 579
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW-D 599
PEA+ LN++IFE IY+ AL+ S E+AA+EGPY TY SPVS+GILQ DMW V PS D
Sbjct: 580 PEARVLNRNIFECIYFAALEASCELAAEEGPYATYEGSPVSQGILQFDMWGVTPSSGLCD 639
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ I +GVRNSLLV+PMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 640 WDGLREKIKAHGVRNSLLVSPMPTASTSQILGNNEAFEPYTSNIYYRRVLSGEFFVVNPH 699
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL E +WS +K ++I +GSVQ + IP++LK +YKTVWEIKQ ++D+A+DR
Sbjct: 700 LLRDLLERDLWSEDVKQQLIAHNGSVQNMDVIPDDLKALYKTVWEIKQRVVLDLAIDRAP 759
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+IDQS SLNIHM P + K++++HF W GLKTG+YYLR++AAADAIKFTVD+ +
Sbjct: 760 FIDQSHSLNIHMVNPTYAKLSTMHFYGWRGGLKTGLYYLRTQAAADAIKFTVDSQL 815
>gi|290984045|ref|XP_002674738.1| ribonucleotide reductase [Naegleria gruberi]
gi|284088330|gb|EFC41994.1| ribonucleotide reductase [Naegleria gruberi]
Length = 812
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/829 (58%), Positives = 621/829 (74%), Gaps = 40/829 (4%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
+VK+ G +E +KI RL+ + L + D ++ +K+ ++ +TT +LD L AE
Sbjct: 4 IVKKSGEKELFSSEKIRIRLQDHTKDLYHINIDSII--EKLQLEIHNDITTEKLDNLIAE 61
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
A M +HPDY LA R+ VS LHK+TK FSE + D+ N + R+ L +PLI+++++
Sbjct: 62 CIAYMAYSHPDYLKLAGRVKVSTLHKHTKSKFSEVVHDLRNFIHPRTNLPSPLISEEVFN 121
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV-QGKVVERPQHMLMRVSIGIHKD 181
++ N LD I +RDF +DYFG+KTLERSYLLK+ ++ ERPQHM MRVS+GIH
Sbjct: 122 VVAANVDVLDQAIKSERDFQFDYFGYKTLERSYLLKLADSRIAERPQHMFMRVSLGIHGG 181
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DI+ AI+TY ++S F HASPTLFNAGTP PQ+SSCFLV MKDDSI GIY+TLK CA+I
Sbjct: 182 DIERAIQTYDLLSSGMFIHASPTLFNAGTPIPQMSSCFLVSMKDDSIHGIYDTLKTCALI 241
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG+SVHNIRA+GSYIRGTNGTSNG++PMLRVFNDTARYVDQGGGKRKGAFA+YL
Sbjct: 242 SKSAGGIGLSVHNIRASGSYIRGTNGTSNGLIPMLRVFNDTARYVDQGGGKRKGAFAIYL 301
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWH+DIF+FL+L+KNHGKEE RARDLF LWV DLFM+RV+ + +WSLFCPNEA GLAD
Sbjct: 302 EPWHSDIFDFLDLRKNHGKEEIRARDLFLGLWVNDLFMQRVKDDAEWSLFCPNEAQGLAD 361
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG EF +LYT YEREGKAK+ ++AQ LWF I+ +QIETG PYML+KD+CNRKSNQQNLG
Sbjct: 362 VWGEEFNQLYTKYEREGKAKRTIKAQELWFAIIEAQIETGVPYMLYKDSCNRKSNQQNLG 421
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEIIE+T+P E AVCNLASIALP++V E + + +D
Sbjct: 422 TIKSSNLCTEIIEFTAPDEVAVCNLASIALPKYVNE------------------ETQTYD 463
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
+KL EV I T NLNKIID NYYPVE A++SN RHRPIG+GVQGLAD FI + + FES
Sbjct: 464 HQKLYEVVKIATYNLNKIIDKNYYPVEEAKKSNFRHRPIGLGVQGLADAFIKMRLPFESE 523
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN---------V 592
EA+ LN++IFETIY+ A+ S E+A EG YETY SP+SKGI Q + W
Sbjct: 524 EAKNLNREIFETIYFAAMTCSMELAKVEGTYETYEGSPISKGIFQHEFWTREGEPFEGKT 583
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
I S RWDW LR + ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSN+Y+RRVLSGE
Sbjct: 584 ITSGRWDWEGLRQQVLQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNVYTRRVLSGE 643
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
+ V+N+HL+ DL ++ +W+PTI N+II + GS+Q I IP+++K +YKTVWEIKQ +L+D
Sbjct: 644 YPVINRHLVADLIKIDMWNPTIVNQIIGNRGSIQNIQGIPDDIKELYKTVWEIKQRSLLD 703
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+A++R +IDQSQSLN+ + P+ K++S+HF WS+GLKTGMYYLR++ AADAI+FTVD
Sbjct: 704 LAIERSPFIDQSQSLNVFISIPSVSKMSSMHFYAWSKGLKTGMYYLRTQPAADAIQFTVD 763
Query: 773 TSVFKE-----KPEKP----ELVVDDETKMAQV-VCSLTNREECMACGS 811
++ K+ + E+P E++V K Q + EEC+ CG+
Sbjct: 764 PNMMKQSVSTSQAEEPKQEEEVIVCKRKKRGQAPPEGEEDEEECLVCGA 812
>gi|95007128|emb|CAJ20349.1| ribonucleoside-diphosphate reductase, large chain [Toxoplasma
gondii RH]
Length = 855
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/776 (61%), Positives = 606/776 (78%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVV R G +E V FD+I R++KLS+GL DP V+Q V G+Y G+ TS+LD+LA
Sbjct: 38 MYVVNRRGEEEPVSFDQILKRIEKLSFGLHP-LVDPARVAQAVINGMYAGIRTSELDDLA 96
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T+A M +HPD++ LAARIA+ NLHKNT +F T+ D + Y ++ G +A L++ ++
Sbjct: 97 AQTSAYMAASHPDFSRLAARIAIDNLHKNTTDNFL-TVIDQLHGYVDKLGREAKLVSTEV 155
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE + +N L+ + Y RDFDYDYFGFKTLERSYLLK+ ++VERPQHMLMRV+ GIH
Sbjct: 156 YEFVRENEQALNEALNYSRDFDYDYFGFKTLERSYLLKIHDRIVERPQHMLMRVACGIHC 215
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D++ AI+TY +MSQ++FTHA+PTLFNAGTPRPQ+SSCFL+ M++DSI+GI+ TLK+CA+
Sbjct: 216 GDVEKAIETYELMSQKFFTHATPTLFNAGTPRPQMSSCFLLTMQEDSIDGIFSTLKQCAL 275
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++V +IRAT SYIRGTNG SNG++PMLRVFND ARYVDQGGGKRKG+ A+Y
Sbjct: 276 ISKTAGGLGLAVTDIRATNSYIRGTNGYSNGLLPMLRVFNDAARYVDQGGGKRKGSLAIY 335
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL++KKNHGKEE RARDLF ALW+PDLFMERV N W+L CPNE GL
Sbjct: 336 LEPWHFDVFDFLDIKKNHGKEERRARDLFCALWIPDLFMERVNDNAGWTLMCPNECPGLT 395
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EF++LY YEREG+ +K + AQ+LWF IL +QIETGTPYML+KD CNRKSNQ+NL
Sbjct: 396 EVWGDEFKELYERYEREGRGRKTIPAQHLWFAILQAQIETGTPYMLYKDACNRKSNQKNL 455
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTE++EYTS E AVCNLAS++LP+FV ++R F
Sbjct: 456 GTIKCSNLCTEVVEYTSKDEVAVCNLASVSLPKFVDR------------------ESRTF 497
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+E L + ++T NLN++ID NYYPV A++SNLRHRP+G+GVQGLAD F+LL F+S
Sbjct: 498 DYEHLKRIVKVMTRNLNRVIDRNYYPVPEAKKSNLRHRPVGLGVQGLADAFMLLRYPFDS 557
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW-D 599
PEA+ LN++IFE IY+ AL+ S E+AA+EGPY TY SPVS+GILQ DMW V PS D
Sbjct: 558 PEARVLNRNIFECIYFAALEASCELAAEEGPYATYEGSPVSQGILQFDMWGVTPSSGLCD 617
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ I +GVRNSLLV+PMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 618 WDGLREKIKAHGVRNSLLVSPMPTASTSQILGNNEAFEPYTSNIYYRRVLSGEFFVVNPH 677
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL E +WS +K ++I +GSVQ + IP++LK +YKTVWEIKQ ++D+A+DR
Sbjct: 678 LLRDLLERDLWSEDVKQQLIAHNGSVQNMDVIPDDLKALYKTVWEIKQRVVLDLAIDRAP 737
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+IDQS SLNIHM P + K++++HF W GLKTG+YYLR++AAADAIKFTVD+ +
Sbjct: 738 FIDQSHSLNIHMVNPTYAKLSTMHFYGWRGGLKTGLYYLRTQAAADAIKFTVDSQL 793
>gi|312385901|gb|EFR30291.1| hypothetical protein AND_00204 [Anopheles darlingi]
Length = 775
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/771 (63%), Positives = 600/771 (77%), Gaps = 34/771 (4%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK 91
+ DPV ++ KV G+Y GVTT +LD LAAETAA MTT+H DYA LAAR+AVSNLHK TK
Sbjct: 2 DFVDPVAITLKVINGLYSGVTTQELDNLAAETAATMTTDHADYAILAARLAVSNLHKETK 61
Query: 92 KSFS---------------ETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEII 136
K FS + + D+Y NE K+P+I++ Y++IM+NA L+S II
Sbjct: 62 KQFSGKRMTPLVIRQESLEKVMHDLYMMENEFLKTKSPMISNTHYKLIMENADRLNSAII 121
Query: 137 YDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQR 196
YDRDF Y+YFGFKTLERSYLLK++GK+VERPQHMLMRV+IGIH +DIDSAI+TY+++S+R
Sbjct: 122 YDRDFGYNYFGFKTLERSYLLKIKGKIVERPQHMLMRVAIGIHGEDIDSAIETYNLLSER 181
Query: 197 WFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIR 256
+FTHASPT+F A T RPQLSSCFL+ M DDSIEGIY+TLK+CA+ISKSAGGIG++VH IR
Sbjct: 182 YFTHASPTMFAAATQRPQLSSCFLLTMSDDSIEGIYDTLKQCALISKSAGGIGLNVHCIR 241
Query: 257 ATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKK 316
A G+YI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH D+FEFL+LKK
Sbjct: 242 AKGTYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHGDVFEFLDLKK 301
Query: 317 NHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER 376
N GKEE RARD+FYALW+PDLFM+RV+ N WSL CP++ GL++ WG EFEKLYT YER
Sbjct: 302 NTGKEEVRARDMFYALWIPDLFMQRVEANEMWSLMCPHDCPGLSETWGEEFEKLYTGYER 361
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
EG+ + V+AQ+LWF I+ SQ+ETG PYML+KD CNRKSNQQN+GTIK SNLCTEI+EY+
Sbjct: 362 EGRFTRQVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNIGTIKCSNLCTEIVEYS 421
Query: 437 SPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENL 496
S E AVCNLASIAL FV+ +R +DF KL EV VT+NL
Sbjct: 422 SKDEIAVCNLASIALNMFVK-------------------PDRTYDFAKLKEVAKTVTKNL 462
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYY 556
NKIID+NYYPV A+RSN+RHRPIGIGVQG+AD FIL+ +ES EAQ LN+ +FETIY+
Sbjct: 463 NKIIDINYYPVPEAKRSNMRHRPIGIGVQGMADAFILMRHPYESEEAQLLNQQMFETIYF 522
Query: 557 HALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSL 616
AL+ S E+AA++GPYE+Y SPVSKGILQ DMW P++ WDW L+ I +GVRNSL
Sbjct: 523 GALEASCELAAQDGPYESYDGSPVSKGILQYDMWEKKPTELWDWAELKRNIVTHGVRNSL 582
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKN 676
L+APMPTAST+QILGNNE FEPYTSN+Y+RRVLSGEF VVN HLL DLTE+ +W +KN
Sbjct: 583 LLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQVVNHHLLKDLTELELWDDEMKN 642
Query: 677 KIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNF 736
KI+ +GS+QKI EIP+ ++ +YKTVWEI T + MA DRG +IDQSQS NIH+ +PN+
Sbjct: 643 KILAQNGSIQKIEEIPQHIRNLYKTVWEISVKTCIKMAADRGAFIDQSQSFNIHVAEPNY 702
Query: 737 KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVV 787
K+TS+HF W GLKTGMYYLR++ A +AI+FTVD S + + L V
Sbjct: 703 GKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKSKLQNGATESNLAV 753
>gi|345107240|ref|YP_004821405.1| ribonucleotide reductase large subunit [Yoka poxvirus]
gi|344267314|gb|AEN03641.1| ribonucleotide reductase large subunit [Yoka poxvirus]
Length = 761
Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/779 (61%), Positives = 591/779 (75%), Gaps = 30/779 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E + FDKIT+R+KKL YGL +H DPV ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRDGRKENIMFDKITSRIKKLCYGLDMDHIDPVNIAMKVIQGIYTGVTTKELDILA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE ++ TT HPDYA LAARI++SNLHK TKK FS+ ++D+Y K +I+ ++
Sbjct: 61 AEISSTCTTIHPDYAILAARISISNLHKETKKIFSDVVEDLY---------KESIISKNV 111
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ K+ ++S II D DF Y+YFGFKTLE+SYLLK+ K+VERPQ+MLMRVSIGIH+
Sbjct: 112 MDVVYKHKERINSSIINDNDFSYNYFGFKTLEKSYLLKINNKIVERPQYMLMRVSIGIHQ 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDS I+TY ++S++WF HASPTLFN+GT PQ+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 172 WDIDSVIETYKLLSEKWFIHASPTLFNSGTCHPQMSSCFLLNMIDDSIEGIYDTLKRCAL 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGIVPMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 232 ISKMAGGIGISISNIRASGSYISGTNGISNGIVPMLRVYNNTARYIDQGGNKRPGVMAIY 291
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL LK+N G EE R RDLF ALW+PD+FM RV+ + WSL CPNE GL
Sbjct: 292 LEPWHADIMDFLELKRNSGNEELRTRDLFIALWIPDIFMTRVKNDEDWSLMCPNECPGLD 351
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFEKLYT YE + KA+ V++A+ +W I+ SQIETGTP+ML+KD CN+K+N QNL
Sbjct: 352 NVYGDEFEKLYTKYEHDNKARAVIKARTVWKSIIESQIETGTPFMLYKDACNKKNNHQNL 411
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK NLC EII+YT+P E AVCNLASIAL RFV N F
Sbjct: 412 GTIKCGNLCAEIIQYTNPNEVAVCNLASIALNRFV--------------------INNKF 451
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL E+ I+ NLNKIID+N YP+ A SN HRPIGIGVQGLADTFILL FES
Sbjct: 452 DFNKLREIVKIIVRNLNKIIDINKYPLPEAEFSNKTHRPIGIGVQGLADTFILLNYPFES 511
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIYY AL+ S E+A GPY+TY+ SP+SKGILQ D WNV+PSD WDW
Sbjct: 512 SEARNLNIKIFETIYYSALEASCELAKLYGPYKTYNGSPISKGILQYDFWNVVPSDLWDW 571
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L+ I K GVRNSLLVA MPTAST+QI GNNE EPYTSNIYSRRVLSGEF +VN HL
Sbjct: 572 KLLKKKIQKYGVRNSLLVASMPTASTAQIFGNNESIEPYTSNIYSRRVLSGEFQIVNPHL 631
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +WS +KNKII + GS+Q +PE++K IYKTVWEI Q ++DMA DRG +
Sbjct: 632 LKTLTERKLWSNELKNKIIENGGSIQN-TNLPEDIKQIYKTVWEIPQRVILDMAADRGAF 690
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
IDQSQSLNIH+ +P++ K+TS+HF WS GLKTGMYYLR+++A++ IKFTV+ K
Sbjct: 691 IDQSQSLNIHISEPSYSKLTSMHFYGWSLGLKTGMYYLRTKSASNPIKFTVEKDKLSNK 749
>gi|229597646|pdb|2WGH|A Chain A, Human Ribonucleotide Reductase R1 Subunit (Rrm1) In
Complex With Datp And Mg.
gi|229597647|pdb|2WGH|B Chain B, Human Ribonucleotide Reductase R1 Subunit (Rrm1) In
Complex With Datp And Mg
Length = 676
Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/688 (68%), Positives = 562/688 (81%), Gaps = 19/688 (2%)
Query: 75 ASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSE 134
A LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A +I++ N L+S
Sbjct: 2 AILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSA 61
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMS 194
IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK+DID+AI+TY+++S
Sbjct: 62 IIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLS 121
Query: 195 QRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHN 254
+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V
Sbjct: 122 ERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSC 181
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNL 314
IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+L
Sbjct: 182 IRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDL 241
Query: 315 KKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHY 374
KKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL + WG EFEKLY Y
Sbjct: 242 KKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASY 301
Query: 375 EREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIE 434
E++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+E
Sbjct: 302 EKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVE 361
Query: 435 YTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTE 494
YTS E AVCNLAS+AL +V + +DF+KLAEVT +V
Sbjct: 362 YTSKDEVAVCNLASLALNMYV-------------------TSEHTYDFKKLAEVTKVVVR 402
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETI 554
NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FES EAQ LNK IFETI
Sbjct: 403 NLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETI 462
Query: 555 YYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRN 614
YY AL+ S ++A ++GPYETY SPVSKGILQ DMWNV P+D WDW VL++ I+K G+RN
Sbjct: 463 YYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRN 522
Query: 615 SLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTI 674
SLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE G+W +
Sbjct: 523 SLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEM 582
Query: 675 KNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQP 734
KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +P
Sbjct: 583 KNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEP 642
Query: 735 NFKKVTSLHFRTWSRGLKTGMYYLRSRA 762
N+ K+TS+HF W +GLKTGMYYLR+RA
Sbjct: 643 NYGKLTSMHFYGWKQGLKTGMYYLRTRA 670
>gi|401395878|ref|XP_003879702.1| putative ribonucleoside-diphosphate reductase, large subunit
[Neospora caninum Liverpool]
gi|325114109|emb|CBZ49667.1| putative ribonucleoside-diphosphate reductase, large subunit
[Neospora caninum Liverpool]
Length = 886
Score = 1013 bits (2619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/776 (61%), Positives = 603/776 (77%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVV R G +E V FD+I R++KLS+GL DP V+Q V G+Y G+ TS+LD+LA
Sbjct: 61 MYVVNRRGEEEPVSFDQILKRIEKLSFGLHP-LVDPARVAQAVINGMYAGIRTSELDDLA 119
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T+A M +HPD++ LAARIA+ NLHKNT +F I+ ++ Y ++ G +A L++ ++
Sbjct: 120 AQTSAYMAASHPDFSKLAARIAIDNLHKNTTDNFLTVIEQLHG-YVDKLGREAKLVSTEV 178
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE + N L+ + Y RDF+YDYFGFKTLERSYLLK+ ++VERPQHMLMRV+ GIH
Sbjct: 179 YEFVKANEKALNEALNYSRDFEYDYFGFKTLERSYLLKIHDRIVERPQHMLMRVACGIHC 238
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+++ A++TY +MSQ++FTHA+PTLFNAGTPRPQ+SSCFL+ M++DSI+GI+ TLK+CA+
Sbjct: 239 GNVERAVETYELMSQKFFTHATPTLFNAGTPRPQMSSCFLLTMQEDSIDGIFSTLKQCAL 298
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++V +IRAT SYIRGTNG SNG++PMLRVFND ARYVDQGGGKRKG+ A+Y
Sbjct: 299 ISKTAGGLGLAVTDIRATNSYIRGTNGYSNGLLPMLRVFNDAARYVDQGGGKRKGSLAIY 358
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+FL++KKNHGKEE RARDLF ALW+PDLFMERV N W+L CPNE GL
Sbjct: 359 LEPWHFDVFDFLDIKKNHGKEERRARDLFCALWIPDLFMERVNDNAGWTLMCPNECPGLT 418
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EF++LY YEREG+ +K + AQ+LWF IL +QIETGTPYML+KD CNRKSNQ+NL
Sbjct: 419 EVWGEEFKELYERYEREGRGRKTIPAQHLWFAILQAQIETGTPYMLYKDACNRKSNQKNL 478
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTE++EYTS E AVCNLAS++LP+FV + R F
Sbjct: 479 GTIKCSNLCTEVVEYTSKDEVAVCNLASVSLPKFVDR------------------ETRTF 520
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+E L ++ ++T NLN++ID NYYPV A+ SNLRHRP+G+GVQGLAD F+LL F+S
Sbjct: 521 DYEHLKKIVKVMTRNLNRVIDRNYYPVPEAKNSNLRHRPVGLGVQGLADAFMLLRYPFDS 580
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW-D 599
PEA+ LN++IFE IYY AL+ S E+AA+EGPY TY SP+S+GILQ DMW V PS D
Sbjct: 581 PEARLLNRNIFECIYYAALEASCELAAEEGPYATYEGSPMSQGILQFDMWGVTPSSGLCD 640
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ I K+GVRNSLLV+PMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 641 WSALREKIKKHGVRNSLLVSPMPTASTSQILGNNEAFEPYTSNIYYRRVLSGEFFVVNPH 700
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL E +WS +K ++I +G V + IP++LK +YKTVWEIKQ ++D+A+DR
Sbjct: 701 LLRDLLERDLWSEDVKQQLIAHNGCVLNMDVIPDDLKALYKTVWEIKQRVVLDLAIDRSP 760
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
YIDQS SLNIHM P + K++++HF W GLKTG+YYLR++AAADAIKFTVD+ +
Sbjct: 761 YIDQSHSLNIHMVNPTYAKLSTMHFYGWRGGLKTGLYYLRTQAAADAIKFTVDSQL 816
>gi|373447499|gb|AEY72884.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373449162|gb|AEY74540.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 763
Score = 1012 bits (2617), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/790 (61%), Positives = 605/790 (76%), Gaps = 34/790 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNLAS+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LNK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WN W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWN--------W 572
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 573 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 632
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 633 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 691
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 692 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 747
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 748 -KPLVVCDSE 756
>gi|374724342|gb|EHR76422.1| ribonucleoside-diphosphate reductase alpha chain [uncultured marine
group II euryarchaeote]
Length = 797
Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/817 (58%), Positives = 618/817 (75%), Gaps = 28/817 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VV R G +E V FD I +L+ L++GL DP V++ G+Y GVTT +LD+LA
Sbjct: 3 MQVVNRKGEREDVRFDAIHEKLRSLTHGLDPVWVDPGHVTKLTIEGLYDGVTTRELDQLA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++ + HPDY+ LAARI V +LH++TK++F++ I D+ + + S APLI++++
Sbjct: 63 AETAASLASQHPDYSRLAARICVDDLHRSTKETFTDVITDLREYIDPESKKHAPLISEEV 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y IIM+NA L++ + Y RD +YDYFGFKTLERSYLL++ G++ ERPQHMLMRV++GIH
Sbjct: 123 YSIIMENAEVLNNHVNYSRDHNYDYFGFKTLERSYLLRLNGEIAERPQHMLMRVAVGIHH 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+I A++TY +MSQ +FTHA+PTLFN+GTP PQ+SSCFL+ M+DDS++GIY+TLK+CA+
Sbjct: 183 GNITKALETYDLMSQGYFTHATPTLFNSGTPTPQMSSCFLLTMQDDSLDGIYDTLKQCAL 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H+IR+ GSYI+GTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+ A+Y
Sbjct: 243 ISKSAGGIGLSIHHIRSKGSYIKGTNGESNGIVPMLRVFNDTARYVDQGGGKRKGSIAIY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DI FL+LKKNHGKEE RARDLFYALW PDLFMERV+ N WS FCPNE GL
Sbjct: 303 LEPWHPDILAFLDLKKNHGKEELRARDLFYALWTPDLFMERVEQNADWSFFCPNECPGLQ 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +GA+F+ LY YE EG A++ + A+ +W +++ SQIETGTPYML+KD N KSNQ+NL
Sbjct: 363 DAYGADFKALYEKYESEGLARETLPARTVWDKVVESQIETGTPYMLYKDAANEKSNQKNL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEI+EYT+ E AVCNLASIAL ++V D+ +N F
Sbjct: 423 GTIRSSNLCTEIMEYTAKDEVAVCNLASIALNKYV---DL---------------ENSTF 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ + L +VT T NLN++IDVNYYPVE AR SN+RHRPIG+GVQGLADTF LL + FES
Sbjct: 465 NHQLLYDVTYHATGNLNRVIDVNYYPVEEARNSNMRHRPIGLGVQGLADTFALLQLPFES 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
P+A+ LNK+IFETIY+ A S + A EG Y T+ SP SKG LQ D+W + S RWD
Sbjct: 525 PQARALNKEIFETIYFAACTASKDAAIAEGAYSTFQGSPASKGELQFDLWGMNDHSGRWD 584
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I ++G+RNSLL+APMPTASTSQILGNNECFE +TSN+Y RR LSGEF+V+NKH
Sbjct: 585 WTTLKGEIIEHGMRNSLLLAPMPTASTSQILGNNECFEAFTSNLYVRRTLSGEFIVLNKH 644
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL + +WS +K++I+ GS+Q I IPE +K +YKT WEIKQ ++DMA DRG
Sbjct: 645 LVRDLIALDLWSLNMKDEILRHKGSIQAIEGIPEHIKALYKTTWEIKQRHVLDMAADRGA 704
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
Y+DQSQS+NIHM N KVTS+HF W +GLKTGMYYLR++AAADAI+FTV+ +++
Sbjct: 705 YVDQSQSMNIHMVDANPAKVTSMHFYGWKQGLKTGMYYLRTKAAADAIQFTVEAKKGEDQ 764
Query: 780 -----PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
++ E + + + + CSL ++C++CGS
Sbjct: 765 TVGGLADRAEEI----SSLEAIACSLDTPDDCLSCGS 797
>gi|195456500|ref|XP_002075166.1| GK23355 [Drosophila willistoni]
gi|194171251|gb|EDW86152.1| GK23355 [Drosophila willistoni]
Length = 768
Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/740 (63%), Positives = 587/740 (79%), Gaps = 22/740 (2%)
Query: 36 PVL---VSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK 92
PVL ++ +V G+Y GVTT +LD LAAE AA +T NH DYA LAARIAVSNLHK TKK
Sbjct: 27 PVLEVSITLQVINGLYCGVTTQELDNLAAEIAAGLTCNHADYAILAARIAVSNLHKETKK 86
Query: 93 SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLE 152
FSE +++Y+H N+ + +P+++ Y I+ NA L+S +IYDRDF Y+YFGFKTLE
Sbjct: 87 VFSEVFEELYHHVNKETNNPSPMVSSYHYNIVKNNADRLNSAMIYDRDFGYNYFGFKTLE 146
Query: 153 RSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR 212
RSYLLK+ GKV ERPQHMLMRV+IGIH +DID+A++TY+++S+R+FTHASPTLF A T R
Sbjct: 147 RSYLLKINGKVAERPQHMLMRVAIGIHGEDIDAAVETYNLLSERYFTHASPTLFAAATNR 206
Query: 213 PQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGI 272
PQLSSCFL+ M DSIEGI++T+++CA+ISKSAGGIG++VH IRA G+ I GTNGTSNG+
Sbjct: 207 PQLSSCFLLTMTSDSIEGIFKTVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGL 266
Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYAL 332
VPMLRVFN+ ARYVDQGGGKR GAFA+YLEPWH+DIFEFL+LK+N GKEEHRARDLFYAL
Sbjct: 267 VPMLRVFNNVARYVDQGGGKRPGAFAIYLEPWHSDIFEFLDLKRNTGKEEHRARDLFYAL 326
Query: 333 WVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFE 392
W+PDLFM+RV+ N WSL CP++ GL D WG +FE+LY YE+EG A ++V+AQ+LWF
Sbjct: 327 WIPDLFMKRVEANEDWSLMCPHKCPGLEDVWGDKFEELYVKYEKEGLANRIVKAQSLWFA 386
Query: 393 ILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 452
I+ SQ+ETG PYMLFKD+CN+KSNQQN+GTIK SNLCTE++EY++P E AVCNLASIAL
Sbjct: 387 IIESQVETGNPYMLFKDSCNKKSNQQNVGTIKCSNLCTEVVEYSAPDEIAVCNLASIALN 446
Query: 453 RFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARR 512
FV + ++ +DF+KL EVT IV +NLNKIIDVNYYP+ A++
Sbjct: 447 MFV-------------------TTDKTYDFKKLKEVTKIVAKNLNKIIDVNYYPLPEAKK 487
Query: 513 SNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPY 572
SNL+HRPIGIGVQGLAD IL+ + +ES +A LN+ IFETIY+ AL+ S E+A GPY
Sbjct: 488 SNLKHRPIGIGVQGLADALILMRLPYESKQACLLNQQIFETIYFGALEASCELAQMYGPY 547
Query: 573 ETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
ET+ SP S+GILQ DMWN PSD WDW L+ I ++G+RNSLLVAPMPTAST+QI+GN
Sbjct: 548 ETFKGSPASRGILQYDMWNKKPSDLWDWNKLKAAIKEHGIRNSLLVAPMPTASTAQIMGN 607
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIP 692
NE FEPYT+NIY+RRVLSGEF VVN HLL DLTE+ +W +KNKI+ GS+Q I IP
Sbjct: 608 NESFEPYTTNIYTRRVLSGEFQVVNHHLLRDLTELDLWDDDMKNKIVSSRGSIQNIEVIP 667
Query: 693 EELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLK 752
+ ++ +YKTVWEI + + MA DRG +IDQSQS NIH+ +PN+ K+TS+HF +W GLK
Sbjct: 668 QNVRDLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKSGLK 727
Query: 753 TGMYYLRSRAAADAIKFTVD 772
TGMYYLR++ AA AI+FTVD
Sbjct: 728 TGMYYLRTKPAAHAIQFTVD 747
>gi|294471317|gb|ADE80903.1| RR1 [Spodoptera litura NPV]
Length = 772
Score = 1010 bits (2611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/777 (61%), Positives = 597/777 (76%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KRDGR+E V KI R++K YGL +P ++++V G+Y GVTT +LD L A
Sbjct: 6 YVTKRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIA 65
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA+MT +H DY+ LAAR+AVSNLHK TK F I DMY ++++G P+I+D Y
Sbjct: 66 ETAASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMISDFHY 125
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
II NA L+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRV+IGIH
Sbjct: 126 GIIAANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGR 185
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID+AI+TY++MS +FTHASPTLF+A TP+ Q+SSCFLV +K+DSIEGIY+TLK+CA+I
Sbjct: 186 DIDAAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMI 245
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKS GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+
Sbjct: 246 SKSGGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYV 305
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+F+FL+LKKN GKEE RAR+LFYALW+PDLFM RV+T+ WSL CP ++ GLAD
Sbjct: 306 EPWHADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLAD 365
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
C G EFE LY YE++G+ K V AQ LW I+ +Q+ETGTPYML+KD+CNRKSNQ NLG
Sbjct: 366 CHGVEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLG 425
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEI+EYTS E AVCNLASIA+ +FV + +D
Sbjct: 426 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFV------------------APQPGVYD 467
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
FE+L E+T IVT NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + M +ES
Sbjct: 468 FERLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYESD 527
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN-VIPSDRWDW 600
A +LNK IFETIYY AL+ S E+AAK+GPYETY SP S+G LQ DMWN PS+ WDW
Sbjct: 528 AAAELNKKIFETIYYGALEASCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWDW 587
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL
Sbjct: 588 SLLKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHL 647
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL +G+W+ T+KN I+Y++GSVQ I IP E++ +YKTVWE+ T++ MA DRG +
Sbjct: 648 VKDLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAF 707
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD-TSVF 776
IDQSQS N++M +P++ K+TS+HF W GLKTGMYYLR++ AA+AI+FTVD T+ F
Sbjct: 708 IDQSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKTAAF 764
>gi|335682|gb|AAA48274.1| Vaccinia virus matrix 1 protein [Vaccinia virus]
Length = 771
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/790 (61%), Positives = 606/790 (76%), Gaps = 26/790 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL CP+E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE+LYT YERE + K +++A+ +W I+ SQIETGTP++L+KD CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+Y E AVCNL S+AL FV + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLGSVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL F+S
Sbjct: 461 DFLKLKVVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ +NK IFETIYY AL+ S E+A KEGPY+TY S S GILQ D+WNV+PSD W+W
Sbjct: 521 LEAQDINKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAP+P +QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPLPLHQHAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L LTE +W+ IKN+I+ D GS+Q +PE++K +YKT+WEI Q T++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQS+NIH+ P++ K+TS+HF WS GLKTGMYYLR++ A+ I+FT+D K+K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD----KDKI 755
Query: 781 EKPELVVDDE 790
KP +V D E
Sbjct: 756 -KPPVVCDSE 764
>gi|409042060|gb|EKM51544.1| hypothetical protein PHACADRAFT_261748 [Phanerochaete carnosa
HHB-10118-sp]
Length = 810
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/719 (65%), Positives = 579/719 (80%), Gaps = 20/719 (2%)
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
MTT HPDYA LAARIAVSNLHK TKKSFS IKD+Y + N ++G A +IA D+YEI+
Sbjct: 1 MTTKHPDYAILAARIAVSNLHKETKKSFSAVIKDLYEYVNPKNGRPASMIAKDVYEIVTA 60
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSA 186
NA LDS +IY RDF Y++FGFKTLERSYLLK+ G+ ERPQH+LMRV++GIH DID A
Sbjct: 61 NAERLDSAVIYSRDFSYNFFGFKTLERSYLLKINGRPAERPQHLLMRVAVGIHGADIDRA 120
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+TY++MS+R+FTHASPTLFNAGTP PQLSSCFLVCMKDDSIEGIY+TLK CA+ISK+AG
Sbjct: 121 IETYNLMSERFFTHASPTLFNAGTPNPQLSSCFLVCMKDDSIEGIYDTLKSCAMISKTAG 180
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG+++HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 181 GIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYLEPWHA 240
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DIFEF++L+KNHGKEE RARDLFYALW+PDLFM+RV+ NG+W+LFCPNEA GL + WGAE
Sbjct: 241 DIFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGKWTLFCPNEAPGLHEVWGAE 300
Query: 367 FEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSS 426
FE+LY YEREG+ +K ++AQ LW+ +L +QIETG P+ML+KD+ N KSNQQNLGTIKSS
Sbjct: 301 FEELYERYEREGRGRKTIEAQKLWYAVLEAQIETGGPFMLYKDSANAKSNQQNLGTIKSS 360
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEIIEY++P ETAVCNLASIALP ++ +N ++F+KL
Sbjct: 361 NLCTEIIEYSAPDETAVCNLASIALPSYI--------------------ENGQYNFQKLH 400
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
++T +V NLN+IIDVNYYP ARRSN+RHRPIG+GV GLAD F+ L M F+SPEA+QL
Sbjct: 401 DITKVVVYNLNRIIDVNYYPTPEARRSNMRHRPIGVGVNGLADAFMALRMPFDSPEARQL 460
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDM 606
NK IFETIY+ A++ SS+IA ++GPYETY SP S G LQ D+W V PSD WDW ++
Sbjct: 461 NKQIFETIYHAAVEASSDIAERDGPYETYEGSPASMGQLQYDLWGVTPSDLWDWASVKVK 520
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
+++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +V LL +L +
Sbjct: 521 VARTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVCPWLLRELVD 580
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
+ +W T+KN II ++GS+Q I IP+++K IYKTVWEI Q ++D+A DRG +I QSQS
Sbjct: 581 LKLWDDTMKNMIIANNGSIQSIIGIPDDIKAIYKTVWEISQKKVLDLAADRGAFICQSQS 640
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPEL 785
LN+H+ P ++TS+HF W +GLKTGMYYLR+R AA AI+FTVD S+ KE + EL
Sbjct: 641 LNVHLQSPTVGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSILKEAQQLREL 699
>gi|410075976|ref|XP_003955570.1| hypothetical protein KAFR_0B01360 [Kazachstania africana CBS 2517]
gi|372462153|emb|CCF56435.1| hypothetical protein KAFR_0B01360 [Kazachstania africana CBS 2517]
Length = 845
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/775 (60%), Positives = 606/775 (78%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ +LSYGL E D V+Q++ AG+Y+GV+T +LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARITRLSYGLDPERIDAAKVTQRIIAGIYEGVSTQELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDY++LAAR+A+SNLHK T K FS+ + +++++ N +G APL++ +
Sbjct: 61 AETCAYMTTIHPDYSTLAARLAISNLHKQTTKQFSQVVSNLHHYINPATGKHAPLVSKRV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+MKN L+S I+YDRD++++YFGFKTLERSYLL+++ KVVERPQH+LMRV++GIH
Sbjct: 121 YDIVMKNKDVLNSAIVYDRDYNFNYFGFKTLERSYLLRIEDKVVERPQHLLMRVALGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAI++Y++MS ++F HA+PTLFNAGTP PQ+SSCFLV MKDDSI+GI+ETLKECA+
Sbjct: 181 DDIESAIESYNLMSLKYFIHATPTLFNAGTPHPQMSSCFLVSMKDDSIDGIFETLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV VH+IR + SYI GTNG + G++P++ +FN TAR+V QGG KR GA A +
Sbjct: 241 ISKSAGGIGVHVHDIRGSDSYIAGTNGKAKGMMPVVSIFNTTARFVTQGGNKRPGAIAFF 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+F+F+ ++KNHG EE+RARDLF ALW+PDLFM+RV NGQW+ F +EA GL+
Sbjct: 301 LEPWHPDVFKFIEMRKNHGDEEYRARDLFPALWIPDLFMKRVADNGQWTFFSSSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YEREG+ K ++AQ LW+ IL +Q ETGTP+M +KD N+KSNQ+NL
Sbjct: 361 DVYGDEFEELYERYEREGRG-KTIKAQKLWYAILEAQTETGTPFMCYKDAANQKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY++P ETAVCNLASI LP F+ S +K +
Sbjct: 420 GTIKSSNLCCEILEYSNPEETAVCNLASICLPTFIEY--------------SEDNKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL V ++T NLN++ID NYYPV A+RSN+RHRPI +GVQGLADTF++L + FES
Sbjct: 466 NFDKLHSVAKVITRNLNRVIDNNYYPVPEAKRSNMRHRPIALGVQGLADTFMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA +LNK IFETIY+ +L+ S E+A KEG YET+ SP S+GILQ DMWN P WDW
Sbjct: 526 DEATKLNKQIFETIYHASLEASCELAQKEGHYETFPGSPASQGILQMDMWNAEPFGMWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K G+RNSL +APMPTASTSQI+G NECFEP TSN+Y RRVLSGEF +VN +L
Sbjct: 586 ETLRKDIVKYGIRNSLTMAPMPTASTSQIMGFNECFEPITSNMYQRRVLSGEFQIVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQNLPNVPDELKELYKTVWEISQKKILDMAADRSIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
IDQS SLN+ + P K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D SV
Sbjct: 706 IDQSHSLNLFIRAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQSV 760
>gi|114635721|ref|XP_001159888.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Pan troglodytes]
gi|397465792|ref|XP_003804665.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Pan paniscus]
Length = 695
Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/714 (66%), Positives = 573/714 (80%), Gaps = 19/714 (2%)
Query: 98 IKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLL 157
++D+YN+ N +G +P++A +I++ N L+S IIYDRDF Y+YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSS 217
K+ GKV ERPQHMLMRVS+GIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLR
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQ 397
FM+RV+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVRE 457
ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +V
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVTS 360
Query: 458 KDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RH
Sbjct: 361 EHT-------------------YDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHN 577
RPIGIGVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A ++GPYETY
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEG 461
Query: 578 SPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SPVSKGILQ DMWNV P+D WDW +L++ I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
PYTSNIY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q IPEIP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
+YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYY
Sbjct: 582 LYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
LR+R AA+ I+FT++ K+K + + + E A +VCSL NR+EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|332211481|ref|XP_003254847.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 3 [Nomascus leucogenys]
Length = 695
Score = 1008 bits (2606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/714 (66%), Positives = 573/714 (80%), Gaps = 19/714 (2%)
Query: 98 IKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLL 157
++D+YN+ N +G +P++A +I++ N L+S IIYDRDF Y+YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSS 217
K+ GKV ERPQHMLMRVS+GIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLR
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQ 397
FM+RV+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVRE 457
ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +V
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVTS 360
Query: 458 KDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RH
Sbjct: 361 EHT-------------------YDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHN 577
RPIGIGVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A ++GPYETY
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEG 461
Query: 578 SPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SPVSKGILQ DMWNV P+D WDW +L++ I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
PYTSNIY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q IPEIP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
+YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYY
Sbjct: 582 LYKTVWEISQKTVLRMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
LR+R AA+ I+FT++ K+K + + + E A +VCSL NR+EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|449139070|gb|AGE89875.1| RR1 [Spodoptera littoralis NPV]
Length = 828
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/772 (61%), Positives = 593/772 (76%), Gaps = 19/772 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV KRDGR+E V KI R++K YGL +P ++++V G+Y GVTT +LD L A
Sbjct: 48 YVTKRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIA 107
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETAA+MT +H DY+ LAAR+AVSNLHK TK F I DMY ++++G P+I+D Y
Sbjct: 108 ETAASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMISDFHY 167
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
II NA L+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRV+IGIH
Sbjct: 168 GIIAANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGR 227
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DID+AI+TY++MS +FTHASPTLF+A TP+ Q+SSCFLV +K+DSIEGIY+TLK+CA+I
Sbjct: 228 DIDAAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMI 287
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKS GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+
Sbjct: 288 SKSGGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYV 347
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHAD+F+FL+LKKN GKEE RAR+LFYALW+PDLFM RV+T+ WSL CP ++ GLAD
Sbjct: 348 EPWHADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLAD 407
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
C G EFE LY YE++G+ K V AQ LW I+ +Q+ETGTPYML+KD+CNRKSNQ NLG
Sbjct: 408 CHGVEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLG 467
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTEI+EYTS E AVCNLASIA+ +FV + +D
Sbjct: 468 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFV------------------APQPGVYD 509
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
FE+L E+T IVT NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + M +ES
Sbjct: 510 FERLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYESD 569
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN-VIPSDRWDW 600
A +LNK IFETIYY AL+ S E+AAK+GPYETY SP S+G LQ DMWN PS+ WDW
Sbjct: 570 AAAELNKKIFETIYYGALEASCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWDW 629
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL
Sbjct: 630 SLLKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHL 689
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL +G+W+ T+KN I+Y++GSVQ I IP E++ +YKTVWE+ T++ MA DRG +
Sbjct: 690 VKDLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAF 749
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS N++M +P++ K+TS+HF W GLKTGMYYLR++ A +AI+FTVD
Sbjct: 750 IDQSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAVNAIQFTVD 801
>gi|194382560|dbj|BAG64450.1| unnamed protein product [Homo sapiens]
Length = 695
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/714 (66%), Positives = 572/714 (80%), Gaps = 19/714 (2%)
Query: 98 IKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLL 157
++D+YN+ N +G +P++A +I++ N L+S IIYDRDF Y+YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSS 217
K+ GKV ERPQHMLMRVS+GIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG NG+VPMLR
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNPNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQ 397
FM+RV+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVRE 457
ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +V
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVTS 360
Query: 458 KDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RH
Sbjct: 361 EHT-------------------YDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHN 577
RPIGIGVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A ++GPYETY
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEG 461
Query: 578 SPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SPVSKGILQ DMWNV P+D WDW VL++ I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
PYTSNIY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q IPEIP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
+YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYY
Sbjct: 582 LYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
LR+R AA+ I+FT++ K+K + + + E A +VCSL NR+EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|442761207|gb|JAA72762.1| Putative ribonucleotide reductase alpha subunit, partial [Ixodes
ricinus]
Length = 740
Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/734 (65%), Positives = 591/734 (80%), Gaps = 21/734 (2%)
Query: 39 VSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI 98
+++KV G+Y+GVTT +LD LAAETAA MTT HPDYA LAARIAVSNLHK TKKSFSE I
Sbjct: 17 IAKKVINGLYEGVTTVELDNLAAETAATMTTKHPDYALLAARIAVSNLHKETKKSFSEVI 76
Query: 99 KDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
++Y+ NE + L P+I ++IY+I+M+NA +S I+YDRDF+Y+YFGFKTLER+YLL+
Sbjct: 77 SNLYHMINESNNLHTPMIDEEIYKIVMENADTFNSAIVYDRDFNYNYFGFKTLERAYLLR 136
Query: 159 VQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSC 218
+ GKVVERPQHMLMRVSIGIH +D+ + ++TY++MS++WFTHASPTLFN+GTPRPQLSSC
Sbjct: 137 INGKVVERPQHMLMRVSIGIHGNDLKNVLETYNLMSEKWFTHASPTLFNSGTPRPQLSSC 196
Query: 219 FLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FL+ MK DSIEGIY+TLK+CA+ISKSAGGIG++VHNIRA GSYI G+NG S+GIVPMLRV
Sbjct: 197 FLLQMKSDSIEGIYDTLKQCALISKSAGGIGLNVHNIRAAGSYIAGSNGKSSGIVPMLRV 256
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLF 338
+N+TARYVDQGG KR GA A+YLEPWHAD+F+FL+LKKN GKEE+RARDLFYALW+PDLF
Sbjct: 257 YNNTARYVDQGGNKRPGAIAIYLEPWHADVFDFLDLKKNTGKEENRARDLFYALWIPDLF 316
Query: 339 MERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQI 398
MERV+ N WSL CPN+ GL D +G +FE+LYT YE E + + V AQ LW+ I+ SQ
Sbjct: 317 MERVEKNETWSLMCPNDCPGLDDVYGKKFEQLYTKYESEKRYIRQVPAQKLWYAIVESQT 376
Query: 399 ETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK 458
ETGTPYML+KD CN KSNQ+N+GTIK SNLCTEI+EYTS E AVCNLASIAL RFVR
Sbjct: 377 ETGTPYMLYKDACNEKSNQKNIGTIKCSNLCTEIVEYTSDKEVAVCNLASIALNRFVR-- 434
Query: 459 DVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHR 518
N FDFE+L V+ I+T NLN+II+ N+YP+ A+ SN+RHR
Sbjct: 435 ------------------NGHFDFEQLRRVSRIITVNLNRIIERNFYPIPEAKLSNMRHR 476
Query: 519 PIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNS 578
PIGIGVQGLADTFILL + F+S EA+ LN+ IFETIYY AL+ S E+A GPYETY S
Sbjct: 477 PIGIGVQGLADTFILLRLPFDSEEARLLNRQIFETIYYGALEQSCELAKNLGPYETYPGS 536
Query: 579 PVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
PVSKG+LQ DM P++ WDW L+ I K GVRNSLLVAPMPTAST+QILGNNE EP
Sbjct: 537 PVSKGLLQYDMXXXKPTEMWDWTSLKKQIVKYGVRNSLLVAPMPTASTAQILGNNESIEP 596
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
YT+N+Y+RRVLSGEF VVN HLL DLT+ G+W+ +KN +I + GSVQK+ IP++LK +
Sbjct: 597 YTTNVYTRRVLSGEFQVVNYHLLKDLTDRGLWNDELKNALIANHGSVQKL-NIPDDLKHL 655
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
Y+TVWEI Q +++MA DRG +IDQSQSLNIH+ QP + K+TS+HF W GLKTGMYYL
Sbjct: 656 YRTVWEIPQKHILEMAADRGAFIDQSQSLNIHIAQPTYSKITSMHFFGWKLGLKTGMYYL 715
Query: 759 RSRAAADAIKFTVD 772
R++ AA+AI+FTVD
Sbjct: 716 RTKPAANAIQFTVD 729
>gi|347600629|gb|AEP15116.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 88]
Length = 746
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/754 (63%), Positives = 581/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
ETA +T HPDY+ LAARIAVS+LHK T FS ++ +YN+ N ++G +PLIADDI
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E I NA LD I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRV+IGIH
Sbjct: 119 IECIRSNAVVLDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+D+AI+TY ++S R FTHA+PT++NAGT PQ+SSCFL+ MKDDSIEGI++TLK CA+
Sbjct: 179 PDVDAAIETYKLLSARVFTHATPTMYNAGTRNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYIRGT G SNG+VPMLRVF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEP HADIFEFL L+KN GKEE RARDLFYALWV D FM+RV+ WSLFCP+E GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG ++ LY YE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEIIEYT+P ETAVCNLASIALP FV++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPSFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L MAF+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ S ++A +G Y TY SP+SKG Q DMWNV PS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSKGKFQFDMWNVTPSVRWNW 578
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL++ G+W ++KN II +GSVQ IP PE+LK IYKTVWEI TL+DMA DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
I QSQS N+ M QP K+TS+HF W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|347481982|gb|AEO97968.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 84]
Length = 746
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/754 (63%), Positives = 582/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
ETA +T HPDY+ LAARIAVS+LHK T FS ++ +YN+ N ++G +PLIADDI
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E I NA LD I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRV+IGIH
Sbjct: 119 IECIRSNAVVLDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+D+AI+TY ++S R FTHA+PT++NAGT PQ+SSCFL+ MKDDSIEGI++TLK CA+
Sbjct: 179 PDVDAAIETYKLLSARVFTHATPTMYNAGTRNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYIRGT G SNG+VPMLRVF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEP HADIFEFL L+KN GKEE RARDLFYALWV D FM+RV+ WSLFCP+E GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG ++ LY YE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEIIEYT+P ETAVCNLASIALP FV++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D ++L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L MAF+S
Sbjct: 459 DHQQLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ S ++A +G Y TY SP+SKG Q D+WNV PS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSKGKFQFDLWNVTPSVRWNW 578
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL++ G+W ++KN II +GSVQ IP PE+LK IYKTVWEI TL+DMA DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
I QSQS N+ M QP K+TS+HF W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|353243108|emb|CCA74687.1| probable RNR1-ribonucleoside-diphosphate reductase large subunit
[Piriformospora indica DSM 11827]
Length = 916
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/803 (59%), Positives = 601/803 (74%), Gaps = 63/803 (7%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPV-----------------------L 38
YV KR R+E V FDKITAR+ KL YGL +H DP+
Sbjct: 3 YVFKRGQRKERVQFDKITARINKLCYGLDPDHVDPIECVFRLLSSIGNRQTALTLSSLLR 62
Query: 39 VSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI 98
+++KV AGVY GVTT +LD LA+ETAA +TT HPDYA LAARIA+SNLHK TKK+FS I
Sbjct: 63 ITKKVIAGVYNGVTTVELDNLASETAAYLTTKHPDYAILAARIAISNLHKETKKNFSAVI 122
Query: 99 KDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
+D+Y H +G A +I+ ++YEI+M NA DS IIYDRDF Y+YFGFKTLERSYLL+
Sbjct: 123 EDLYKH----NGKPAGMISKEVYEIVMANAELFDSTIIYDRDFHYNYFGFKTLERSYLLR 178
Query: 159 VQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSC 218
+ G+V ERPQHMLMRV++GIH D+D ++TY++MS+R+FTHASPTLFNAGTP PQLSSC
Sbjct: 179 INGRVAERPQHMLMRVAVGIHGRDVDRVVETYNLMSERYFTHASPTLFNAGTPHPQLSSC 238
Query: 219 FLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FLV MKDDSIEGIY+TLK CA+ISK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR
Sbjct: 239 FLVTMKDDSIEGIYDTLKTCAMISKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRA 298
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLF 338
++ TARYVDQGG KR GAFA+Y+EPWHADIFEFL+L+KNHGKEE RARDLFYALW+PDLF
Sbjct: 299 YDATARYVDQGGNKRPGAFAIYIEPWHADIFEFLDLRKNHGKEEVRARDLFYALWIPDLF 358
Query: 339 MERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQI 398
M+R +++G WSLFCPNEA GL + +G EFE+LYT YEREG+A+K ++AQ L+F ++ +QI
Sbjct: 359 MKRAESDGDWSLFCPNEAPGLHEVYGDEFEELYTRYEREGRARKTIKAQKLFFAVMEAQI 418
Query: 399 ETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK 458
ETG P+ML+KD NRKSNQQNLGTIKSSNLCTEIIEY+SP E AVCNLAS+ALP FV
Sbjct: 419 ETGGPFMLYKDAANRKSNQQNLGTIKSSNLCTEIIEYSSPDEVAVCNLASLALPTFV--- 475
Query: 459 DVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHR 518
K+ +DF+KL +VT +V NLN+IIDVNYYPV AR+SN+RHR
Sbjct: 476 -----------------KDGAYDFQKLHDVTKVVAFNLNRIIDVNYYPVPEARKSNMRHR 518
Query: 519 PIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNS 578
PIGIGVQGLADTF+ L M F+S +A++LN IFETIY+ A + S+E+A GPYET+ S
Sbjct: 519 PIGIGVQGLADTFMALRMPFDSVQAKELNIQIFETIYHAACEASAEMAEMMGPYETFEGS 578
Query: 579 PVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P S+G LQ D+W V P+ WDW L++ I+ +G+RNSLL+APMPTA+TS ++ ++
Sbjct: 579 PASEGKLQYDLWGVQPTGLWDWDSLKEKIAAHGMRNSLLLAPMPTATTSTLVEFSQ---- 634
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
G +V LL +L ++ +W+ +KN II GS+QKIP IP+++K I
Sbjct: 635 ------------GSSRLVCPWLLRELVDLKLWNDEMKNMIIAHGGSIQKIPGIPDDVKAI 682
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
YKTVWEI Q ++D+A DRG +I QSQSLN+H+ P+ ++TS+HF W +GLKTGMYYL
Sbjct: 683 YKTVWEISQKKVIDLAADRGAFICQSQSLNVHLQNPSVGQLTSMHFYGWKKGLKTGMYYL 742
Query: 759 RSRAAADAIKFTVDTSVFKEKPE 781
R+R AA AI+FTVD S+ + E
Sbjct: 743 RTRPAAQAIQFTVDQSILNKAKE 765
>gi|347482412|gb|AEO98353.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 203]
Length = 746
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/754 (62%), Positives = 581/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
ETA +T HPDY+ LAARIAVS+LHK T FS ++ +YN+ N ++G +PLIADDI
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E I NA D I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRV+IGIH
Sbjct: 119 IECIRSNAEVFDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+D+AI+TY ++SQ+ FTHA+PT++NAGT PQ+SSCFL+ MKDDSIEGI++TLK CA+
Sbjct: 179 PDVDAAIETYKLLSQKKFTHATPTMYNAGTKNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYIRGT G SNG+VPMLRVF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEP HADIF+FL L+KN GKEE RARDLFYALWV D FM+RV+ WSLFCP+E GL+
Sbjct: 299 LEPHHADIFDFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG ++ LY YE +GKA+K + AQ LWF I+ SQIETGTPYML+KD+CNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESDGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEIIEYT+P ETAVCNLASIALP FV++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L MAF+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A+ LNK+IFET+Y+ A+ S ++A +G Y TY SP+SKG Q DMWNV PSDRW+W
Sbjct: 519 HDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSKGKFQFDMWNVTPSDRWNW 578
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSLL+APMPTAST+QILGNNECFEPYTSN+YSRRVLSGEF VVN HL
Sbjct: 579 DTLRSNVKKHGARNSLLLAPMPTASTAQILGNNECFEPYTSNLYSRRVLSGEFPVVNTHL 638
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL++ G+W ++KN II +GSVQ IP PE+LK IYKTVWEI TL+DM+ DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMSADRGAF 698
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
I QSQS N+ M QP K+TS+HF W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|294471323|gb|ADE80908.1| RR1 [Spodoptera litura NPV]
Length = 778
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/769 (60%), Positives = 591/769 (76%), Gaps = 19/769 (2%)
Query: 5 KRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETA 64
KRDGR+E V KI R++K YGL +P ++++V G+Y GVTT +LD L AETA
Sbjct: 4 KRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIAETA 63
Query: 65 AAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEII 124
A+MT +H DY+ LAAR+AVSNLHK TK F I DMY ++++G P+I D Y II
Sbjct: 64 ASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMIPDFHYGII 123
Query: 125 MKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDID 184
NA L+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRV+IGIH DID
Sbjct: 124 AANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGRDID 183
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKS 244
+AI+TY++MS +FTHASPTLF+A TP+ Q+SSCFLV +K+DSIEGIY+TLK+CA+ISKS
Sbjct: 184 AAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMISKS 243
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+EPW
Sbjct: 244 GGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYVEPW 303
Query: 305 HADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWG 364
HAD+F+FL+LKKN GKEE RAR+LFYALW+PDLFM RV+T+ WSL CP ++ GLADC G
Sbjct: 304 HADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLADCHG 363
Query: 365 AEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIK 424
EFE LY YE++G+ K V AQ LW I+ +Q+ETGTPYML+KD+CNRKSNQ NLGTIK
Sbjct: 364 VEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLGTIK 423
Query: 425 SSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEK 484
SNLCTEI+EYTS E AVCNLASIA+ +FV + +DFE+
Sbjct: 424 CSNLCTEIVEYTSKDEVAVCNLASIAVNKFV------------------APQPGVYDFER 465
Query: 485 LAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQ 544
L E+T IVT NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + M +ES A
Sbjct: 466 LKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYESDAAA 525
Query: 545 QLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN-VIPSDRWDWGVL 603
+LNK IFETIYY AL+ S E+AAK+GPYETY SP S+G LQ DMWN PS+ WDW +L
Sbjct: 526 ELNKKIFETIYYGALEASCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWDWSLL 585
Query: 604 RDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHD 663
+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL+ D
Sbjct: 586 KSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHLVKD 645
Query: 664 LTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQ 723
L +G+W+ T+KN I+Y++GSVQ I IP E++ +YKTVWE+ T++ MA DRG +IDQ
Sbjct: 646 LAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAFIDQ 705
Query: 724 SQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
SQS N++M +P++ K+TS+HF W+ GLKTGMYYLR++ A +AI+FTVD
Sbjct: 706 SQSFNVYMAEPSYGKLTSIHFYAWNMGLKTGMYYLRTKPAVNAIQFTVD 754
>gi|403262128|ref|XP_003923447.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Saimiri boliviensis boliviensis]
Length = 695
Score = 1002 bits (2591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/714 (65%), Positives = 571/714 (79%), Gaps = 19/714 (2%)
Query: 98 IKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLL 157
++D+YN+ N +G +P++A +I++ N L+S IIYDRDF Y+YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSS 217
K+ GKV ERPQHMLMRVS+GIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLR
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQ 397
FM+RV+TN WSL CPNE GL + WG EFEKLY YE++ + +KVV+AQ LW+ I+ SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQRRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVRE 457
ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +V
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVTS 360
Query: 458 KDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
+ +DF+KLAEVT ++ NLNKIID+NYYPV A SN RH
Sbjct: 361 EHT-------------------YDFQKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHN 577
RPIGIGVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A + GPYETY
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEG 461
Query: 578 SPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SPVSKGILQ DMWNV P+D WDW +L++ I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
PYTSNIY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q IPEIP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
+YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYY
Sbjct: 582 LYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
LR+R AA+ I+FT++ K+K + + + E A +VCSL NR+EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKIKDKEKISKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|343173119|gb|AEL99262.1| ribonucleoside-diphosphate reductase subunit M1, partial [Silene
latifolia]
Length = 542
Score = 1002 bits (2590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/542 (85%), Positives = 502/542 (92%)
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
KECAVISKSAGGIGVSVHNIRATGSYIRGTNG SNGI PMLRVFNDTARYVDQGGGKRKG
Sbjct: 1 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGLSNGITPMLRVFNDTARYVDQGGGKRKG 60
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
AFAVYLEPWHADIF+FL+L+KNHGKEE RARDLFYALWVPDLFMERVQT+GQWSLFCPNE
Sbjct: 61 AFAVYLEPWHADIFDFLDLRKNHGKEEQRARDLFYALWVPDLFMERVQTDGQWSLFCPNE 120
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
A GLADCWG EFE LYT YER GKAKKVVQAQ+LWFEIL +Q+ETGTPYMLFKD+CNRKS
Sbjct: 121 APGLADCWGKEFETLYTKYERLGKAKKVVQAQSLWFEILKAQMETGTPYMLFKDSCNRKS 180
Query: 416 NQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGS 475
NQQNLGTIKSSNLCTEII+YTSPTETAVCNLASIALPR+V+EK VP ES +++ GS S
Sbjct: 181 NQQNLGTIKSSNLCTEIIQYTSPTETAVCNLASIALPRYVKEKGVPSESQNTKLAGSLDS 240
Query: 476 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
NR+FDF+KLAEV +VT NLNKIIDVN+YPVETARRSN+RHRPIGIG+QGLADTFILLG
Sbjct: 241 GNRYFDFDKLAEVVEVVTTNLNKIIDVNFYPVETARRSNMRHRPIGIGIQGLADTFILLG 300
Query: 536 MAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS 595
M F+SPEAQQLNKDIFETIYYHALKTS ++AAKEGPYETY SPVSKGILQPDMW V PS
Sbjct: 301 MPFDSPEAQQLNKDIFETIYYHALKTSCKLAAKEGPYETYEGSPVSKGILQPDMWGVTPS 360
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
DRWDWG LR MI++ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV
Sbjct: 361 DRWDWGALRGMIAEKGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 420
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VNKHLLHDLTEMG+WSPT+KN+IIY+DGSVQKI EIP LK IYKTVWEIKQ TLVDMAV
Sbjct: 421 VNKHLLHDLTEMGLWSPTLKNQIIYEDGSVQKIIEIPAHLKAIYKTVWEIKQKTLVDMAV 480
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRGC+IDQSQSLNIHMDQ N K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT++
Sbjct: 481 DRGCFIDQSQSLNIHMDQANTGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTL 540
Query: 776 FK 777
K
Sbjct: 541 LK 542
>gi|1710392|sp|P50647.1|RIR1_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|349792|gb|AAA29755.1| ribonucleotide reductase large subunit [Plasmodium falciparum]
Length = 804
Score = 1002 bits (2590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/778 (61%), Positives = 594/778 (76%), Gaps = 22/778 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL P V+Q V G+Y + T +LDELA
Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGLHKLGEYPACVTQGVINGMYSSIKTCELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI NLHKNT +E + +Y Y + G A LI+ ++
Sbjct: 61 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYT-YKDGRGRPASLISKEV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ I+ + L+ EI Y F+YDYFGFKTLERSYLL++ K++ERPQH+LMRVSIGIH
Sbjct: 120 YDFILLHKVRLNKEIDYTTHFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDID A++TYH+MSQ++FTHA+PTLFN+GTPRPQ+SSCFL+ MK DSIEGI+ETLK+CA+
Sbjct: 180 DDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFETLKQCAL 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG++AVY
Sbjct: 240 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSYAVY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+L+KNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE GL+
Sbjct: 300 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLYT YE E KK V AQ+LWF IL SQIETG P L+KD+CN K +NL
Sbjct: 360 ETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPIYLYKDSCNAKP-IKNL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC EIIEYTSP E AVCNLASIAL +FV + + F
Sbjct: 419 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DLEKKEF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL E+T I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL +ES
Sbjct: 461 NFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYLYES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV-IPSDRWD 599
A++LNK I+ET+YY AL+ S + + GPYE+Y SP S+GILQ DMWN + + WD
Sbjct: 521 DAAKELNKRIYETMYYAALEMSVD-WLQSGPYESYQGSPGSQGILQFDMWNAKVDNKYWD 579
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I+K G+RN LL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 580 WDELKLKIAKTGLRNLLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 639
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DL + G+W +K ++I +GS+Q I EIP++LK +YKTVWEIKQ ++DMA DRG
Sbjct: 640 LLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGY 699
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
+IDQSQSLNI++ +P F K++S+HF W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 700 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAK 757
>gi|347600972|gb|AEP15458.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 207]
gi|347601397|gb|AEP15882.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 208]
gi|357972865|gb|AET98138.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 201]
Length = 746
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/754 (62%), Positives = 577/754 (76%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
ETA +T HPDY+ LAARIAVS+LHK T FS ++ +YN+ N ++G +PLIADDI
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E I NA LD I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRV+IGIH
Sbjct: 119 IECIRSNAVVLDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+D+AI+TY ++SQ+ FTHA+PT++NAGT PQ+SSCFL+ MKDDSIEGI++T+K CA+
Sbjct: 179 PDVDAAIETYKLLSQKKFTHATPTMYNAGTKNPQMSSCFLLKMKDDSIEGIFDTIKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYI GT G SNG+VPMLRVF+ TARYVDQGGG+RKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYISGTGGYSNGLVPMLRVFDSTARYVDQGGGRRKGAFAMY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEP HADIFEFL L+KN GKEE RARDLFYALWV D FM+RV+ WSLFCP+E GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG ++ LY YE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEIIEYT+P ETAVCNLASIALP FV++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L MAF+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ S +IA +G Y TY SP+S G Q DMWNV PSDRWDW
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDIAKTKGRYSTYEGSPLSNGKFQFDMWNVTPSDRWDW 578
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K G RNSLL APMPTAST+QILG NECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 NTLRSNVKKYGARNSLLTAPMPTASTAQILGFNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL++ G+W +KN II +GSVQ IP PE+LK IYKTVWEI TL+DM+ DRG +
Sbjct: 639 VKDLSDRGLWGDNMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMSADRGAF 698
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
I QSQS N+ M QP K+TS+HF W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|403339052|gb|EJY68774.1| Ribonucleoside-diphosphate reductase [Oxytricha trifallax]
Length = 857
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/773 (61%), Positives = 596/773 (77%), Gaps = 20/773 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDG ++ + DKI R++ YGL+ + + +V KV +G++ GVTT++LD L
Sbjct: 20 IYVIKRDGTKQEIDQDKIRRRMECHMYGLNEKFINKEVVVNKVFSGIFSGVTTAELDNLT 79
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A M HPDY+ LAARIA+SNLHK T F + + N + ++ G A L+A+D+
Sbjct: 80 AETCAYMNMVHPDYSKLAARIAISNLHKKTSSQFIDVASKLRN-FKDKIGRDAALLAEDV 138
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++I+KN + S I+YDRD++YDYFGF+TLER+YLLK +++ERPQHMLMRVSIGIHK
Sbjct: 139 FDVIVKNQDLIQSRIVYDRDYNYDYFGFRTLERAYLLKDGNQILERPQHMLMRVSIGIHK 198
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D++SA +TY +MSQ WFTHA+PTLFN+GTP+PQ+SSCFL+ +K+DSI+GI+ETLK+ A+
Sbjct: 199 EDLESAFETYDLMSQLWFTHATPTLFNSGTPKPQMSSCFLLTVKEDSIDGIFETLKQIAI 258
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVSV ++RA SYIRGTNG SNG++PML+VFNDTARYVDQGGGKRKGAFAVY
Sbjct: 259 ISKAAGGIGVSVSDVRAADSYIRGTNGYSNGLIPMLKVFNDTARYVDQGGGKRKGAFAVY 318
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADI++FL L+KNHGKEE+RARDLFYALW PDLFM RV+ N W+L CPNE GL
Sbjct: 319 VEPWHADIYDFLQLRKNHGKEENRARDLFYALWTPDLFMRRVEANEDWTLMCPNECPGLT 378
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
WG EFEKLY YE G+ +K V+A+ LW +I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 379 TTWGEEFEKLYIEYETTGRGRKTVKARWLWGQIIESQNETGTPYMLYKDACNRKSNQQNL 438
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+E+TSP E AVCNLASIAL RFV + + + +
Sbjct: 439 GTIKSSNLCTEIVEFTSPDEVAVCNLASIALNRFVLK------------------ETQEY 480
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+EKL VT +T+NLNKIID NYYPV AR SNLRHRPIGIGVQG AD +L + FE
Sbjct: 481 DYEKLHYVTKRITKNLNKIIDNNYYPVPEARNSNLRHRPIGIGVQGFADALQMLKIPFED 540
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
+A +LN+ IFETIY+ A++ S E A EGPYET+ SP+SKG+ Q D+WN P SDR+D
Sbjct: 541 QKALRLNELIFETIYHAAMEASMEQAKVEGPYETFPGSPLSKGLFQFDLWNKKPCSDRYD 600
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + + G RNSLL+APMPTASTSQILGNNE FEPYTSN+Y+RRVL+GEFV VN H
Sbjct: 601 WEQLRKDVIQYGARNSLLLAPMPTASTSQILGNNETFEPYTSNVYTRRVLAGEFVCVNPH 660
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL + ++S IKN ++ +GS+QKI IP+ +K +YKTVWEI Q L+D+A+ RG
Sbjct: 661 LVQDLIDNDLFSSDIKNSLLGLNGSIQKIKSIPQNIKDLYKTVWEIPQKVLLDLAIGRGP 720
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
YI QSQS NI+M +PNF K+TS+HF W GLKTG YYLRS+ + DAIKFTVD
Sbjct: 721 YICQSQSTNIYMGEPNFAKMTSMHFYGWKNGLKTGQYYLRSKPSRDAIKFTVD 773
>gi|18266787|sp|O61065.2|RIR1_CRYPV RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|8365757|gb|AAC12280.2| ribonucleotide reductase R1 subunit [Cryptosporidium parvum]
gi|32398776|emb|CAD98486.1| ribonucleoside-diphosphate reductase large chain [Cryptosporidium
parvum]
Length = 803
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/821 (58%), Positives = 614/821 (74%), Gaps = 32/821 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVV R G +E V FD+I +R+ KLSYGL DP V+Q V G+Y G+ TS+LDELA
Sbjct: 1 MYVVNRKGEEEPVSFDQILSRITKLSYGLHP-LVDPARVTQAVINGLYSGIKTSELDELA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
++T A M H D++ LAARI+ SNLHKNT + +YN + + G APLI+ +
Sbjct: 60 SQTCAYMAATHNDFSKLAARISTSNLHKNTSSDIGDVASQLYN-FKDNQGCPAPLISKPV 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ IM+N ++S+I + +DF+YDYF FKTLERSYLLK+ KVVERPQH+LMRVS GIH
Sbjct: 119 YDFIMENRERINSKIDFSKDFEYDYFAFKTLERSYLLKIDNKVVERPQHLLMRVSCGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY ++SQ++FTHA+PTLFN+GTPRPQ+SSCFL+ + +DSI GI++TL +CA
Sbjct: 179 GDIEAALETYELLSQKYFTHATPTLFNSGTPRPQMSSCFLLRIPEDSINGIFDTLTKCAN 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+GV+V NIR TGSYIRGTNG SNG++PMLRV+NDTARY+DQGGGKRKGA A+Y
Sbjct: 239 ISKTAGGLGVAVSNIRGTGSYIRGTNGRSNGLIPMLRVYNDTARYIDQGGGKRKGAIAIY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+ EF+ ++KNHGKEE R RDLF ALWVPDLFMERV+ + W+L CP+E GL
Sbjct: 299 LEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTLMCPDECRGLQ 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG +F+KLY YE++G+ +K ++AQ LWF IL +QIETGTP++ +KD N KSNQ+NL
Sbjct: 359 DVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDAANSKSNQKNL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI SSNLCTEIIEYTS E AVCNLASI LP+FV + N+ F
Sbjct: 419 GTIVSSNLCTEIIEYTSTDEVAVCNLASIGLPKFVDK------------------NNKTF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT ++T NLNK+IDV YY ++ ++SNLRHRP+GIG+QGLAD F++L M +ES
Sbjct: 461 DFDKLKEVTKVITRNLNKLIDVGYYSLKECKKSNLRHRPLGIGIQGLADCFMMLRMPYES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
A++LNK IFE IYY AL S E+A K GPYETY SP SKGILQ DMW V P S D
Sbjct: 521 EGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMWGVTPDSGLCD 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W +L+D ISK+G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVLSGEF VVN H
Sbjct: 581 WDLLKDRISKHGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVLSGEFFVVNPH 640
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL E+G+W +K II ++GS+Q I IPE+++ +YKTVWEIKQ T++DMA DRG
Sbjct: 641 LLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKTVIDMAADRGP 700
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK-E 778
Y+ QSQSLNIHM+ NF K++S+HF W +GLKTG+YYLR+++A I+FTVD + K E
Sbjct: 701 YVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQFTVDQQLLKSE 760
Query: 779 KPEKPELVVDDETKM---AQ--VVCSL-----TNREECMAC 809
EK L + + AQ + C L + EECM C
Sbjct: 761 TKEKDSLETNKRQALEPEAQKLIACPLRPTNMKDDEECMMC 801
>gi|343173121|gb|AEL99263.1| ribonucleoside-diphosphate reductase subunit M1, partial [Silene
latifolia]
Length = 542
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/542 (85%), Positives = 501/542 (92%)
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
KECAVISKSAGGIGVSVHNIRATGSYIRGTNG SNGI PMLRVFNDTARYVDQGGGKRKG
Sbjct: 1 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGLSNGITPMLRVFNDTARYVDQGGGKRKG 60
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
AFAVYLEPWHADIF+FL+L+KNHGKEE RARDLFYALWVPDLFMERVQT+GQWSLFCPNE
Sbjct: 61 AFAVYLEPWHADIFDFLDLRKNHGKEEQRARDLFYALWVPDLFMERVQTDGQWSLFCPNE 120
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
A GLADCWG EFE LYT YER GKAKKVVQAQ+LWFEIL +Q+ETGTPYMLFKD+CNRKS
Sbjct: 121 APGLADCWGKEFETLYTKYERLGKAKKVVQAQSLWFEILKAQMETGTPYMLFKDSCNRKS 180
Query: 416 NQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGS 475
NQQNLGTIKSSNLCTEII+YTSPTETAVCNLASIALPR+V+EK VP ES +++ GS S
Sbjct: 181 NQQNLGTIKSSNLCTEIIQYTSPTETAVCNLASIALPRYVKEKGVPSESQNTKLAGSLDS 240
Query: 476 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
NR+FDF+KLAEV +VT NLNKIIDVN+YPVETARRSN+RHRPIGIG+QGLADTFILLG
Sbjct: 241 GNRYFDFDKLAEVVEVVTTNLNKIIDVNFYPVETARRSNMRHRPIGIGIQGLADTFILLG 300
Query: 536 MAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS 595
M F+SPEAQQLNKDIFETIYYHALKTS ++AAKEGPYETY SPVSKGILQPDMW V S
Sbjct: 301 MPFDSPEAQQLNKDIFETIYYHALKTSCKLAAKEGPYETYEGSPVSKGILQPDMWGVTLS 360
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
DRWDWG LR MI++ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV
Sbjct: 361 DRWDWGALRGMIAEKGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 420
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VNKHLLHDLTEMG+WSPT+KN+IIY++GSVQKI EIP LK IYKTVWEIKQ TLVDMAV
Sbjct: 421 VNKHLLHDLTEMGLWSPTLKNQIIYENGSVQKIIEIPAHLKAIYKTVWEIKQKTLVDMAV 480
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRGC+IDQSQSLNIHMDQ N K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDTS+
Sbjct: 481 DRGCFIDQSQSLNIHMDQANTGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTSL 540
Query: 776 FK 777
K
Sbjct: 541 LK 542
>gi|73852902|ref|YP_294186.1| putative ribonucleoside-diphosphate reductase protein [Emiliania
huxleyi virus 86]
gi|72415618|emb|CAI65855.1| putative ribonucleoside-diphosphate reductase protein [Emiliania
huxleyi virus 86]
Length = 746
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/754 (62%), Positives = 577/754 (76%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
ETA +T HPDY+ LAARIAVS+LHK T FS + +YN+ N ++G +PLIADDI
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMDSLYNYVNTKTGKWSPLIADDI 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E I NA D I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRV+IGIH
Sbjct: 119 IECIRSNAEVFDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+D+AI+TY ++S R FTHA+PT++NAGT PQ+SSCFL+ MKDDSIEGI++TLK CA+
Sbjct: 179 PDVDAAIETYKLLSARVFTHATPTMYNAGTRNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYIRGT G SNG+VPMLRVF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEP HADIFEFL L+KN GKEE RARDLFYALWV D FM+RV+ WSLFCP+E GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG ++ LY YE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEIIEYT+P ETAVCNLASIALP FV K+ F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFV--------------------KDGTF 458
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L MAF+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ S ++A +G Y TY SP+S+G Q D+WNV PS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSQGKFQFDLWNVTPSVRWNW 578
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL++ G+W ++KN II +GSVQ IP PE+LK IYKTVWEI TL+DMA DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
I QSQS N+ M QP K+TS+HF W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|66475480|ref|XP_627556.1| ribonucleotide-diphosphate reductase large chain; RIR1; c-terminal
PFL-like glycyl radical enzymes-like fold
[Cryptosporidium parvum Iowa II]
gi|46229284|gb|EAK90133.1| ribonucleotide-diphosphate reductase large chain; RIR1; c-terminal
PFL-like glycyl radical enzymes-like fold
[Cryptosporidium parvum Iowa II]
Length = 804
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/821 (58%), Positives = 614/821 (74%), Gaps = 32/821 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVV R G +E V FD+I +R+ KLSYGL DP V+Q V G+Y G+ TS+LDELA
Sbjct: 2 MYVVNRKGEEEPVSFDQILSRITKLSYGLHP-LVDPARVTQAVINGLYSGIKTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
++T A M H D++ LAARI+ SNLHKNT + +YN + + G APLI+ +
Sbjct: 61 SQTCAYMAATHNDFSKLAARISTSNLHKNTSSDIGDVASQLYN-FKDNQGCPAPLISKPV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ IM+N ++S+I + +DF+YDYF FKTLERSYLLK+ KVVERPQH+LMRVS GIH
Sbjct: 120 YDFIMENRERINSKIDFSKDFEYDYFAFKTLERSYLLKIDNKVVERPQHLLMRVSCGIHC 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A++TY ++SQ++FTHA+PTLFN+GTPRPQ+SSCFL+ + +DSI GI++TL +CA
Sbjct: 180 GDIEAALETYELLSQKYFTHATPTLFNSGTPRPQMSSCFLLRIPEDSINGIFDTLTKCAN 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+GV+V NIR TGSYIRGTNG SNG++PMLRV+NDTARY+DQGGGKRKGA A+Y
Sbjct: 240 ISKTAGGLGVAVSNIRGTGSYIRGTNGRSNGLIPMLRVYNDTARYIDQGGGKRKGAIAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+ EF+ ++KNHGKEE R RDLF ALWVPDLFMERV+ + W+L CP+E GL
Sbjct: 300 LEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTLMCPDECRGLQ 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG +F+KLY YE++G+ +K ++AQ LWF IL +QIETGTP++ +KD N KSNQ+NL
Sbjct: 360 DVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDAANSKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI SSNLCTEIIEYTS E AVCNLASI LP+FV + N+ F
Sbjct: 420 GTIVSSNLCTEIIEYTSTDEVAVCNLASIGLPKFVDK------------------NNKTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EVT ++T NLNK+IDV YY ++ ++SNLRHRP+GIG+QGLAD F++L M +ES
Sbjct: 462 DFDKLKEVTKVITRNLNKLIDVGYYSLKECKKSNLRHRPLGIGIQGLADCFMMLRMPYES 521
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
A++LNK IFE IYY AL S E+A K GPYETY SP SKGILQ DMW V P S D
Sbjct: 522 EGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMWGVTPDSGLCD 581
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W +L+D ISK+G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVLSGEF VVN H
Sbjct: 582 WDLLKDRISKHGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVLSGEFFVVNPH 641
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL E+G+W +K II ++GS+Q I IPE+++ +YKTVWEIKQ T++DMA DRG
Sbjct: 642 LLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKTVIDMAADRGP 701
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK-E 778
Y+ QSQSLNIHM+ NF K++S+HF W +GLKTG+YYLR+++A I+FTVD + K E
Sbjct: 702 YVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQFTVDQQLLKSE 761
Query: 779 KPEKPELVVDDETKM---AQ--VVCSL-----TNREECMAC 809
EK L + + AQ + C L + EECM C
Sbjct: 762 TKEKDSLETNKRQALEPEAQKLIACPLRPTNMKDDEECMMC 802
>gi|294471336|gb|ADE80919.1| RR1 [Spodoptera litura NPV]
Length = 778
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/769 (60%), Positives = 588/769 (76%), Gaps = 19/769 (2%)
Query: 5 KRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETA 64
KRDGR+E V KI R++K YGL +P ++++V G+Y GVTT +LD L AETA
Sbjct: 4 KRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIAETA 63
Query: 65 AAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEII 124
A+MT +H DY+ LAAR+AVSNLH TK F I DMY ++++G P+I+D Y II
Sbjct: 64 ASMTIDHSDYSLLAARLAVSNLHNETKDLFFNVIVDMYEAIDQKTGAATPMISDFHYGII 123
Query: 125 MKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDID 184
NA L+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRV+IGIH DID
Sbjct: 124 AANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGRDID 183
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKS 244
+AI+TY++MS +FTHASPTLF+A TP+ Q+SSCFLV +K+DSIEGIY+TLK+CA+ISKS
Sbjct: 184 AAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMISKS 243
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+EPW
Sbjct: 244 GGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYVEPW 303
Query: 305 HADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWG 364
HAD+ +FL+LKKN GKEE RAR+LFYALW+PDLFM RV+T+ WSL CP ++ GLADC G
Sbjct: 304 HADVSDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLADCHG 363
Query: 365 AEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIK 424
EFE LY YE++G+ K V AQ LW I+ +Q+ETGTPYML+KD+CNRKSNQ NLGTIK
Sbjct: 364 VEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLGTIK 423
Query: 425 SSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEK 484
SNLCTEI+EYTS E AVCNLASIA+ +FV + +DFE+
Sbjct: 424 CSNLCTEIVEYTSKDEVAVCNLASIAVNKFV------------------APQPGVYDFER 465
Query: 485 LAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQ 544
L E+T IVT NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + M +ES A
Sbjct: 466 LKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYESDAAA 525
Query: 545 QLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN-VIPSDRWDWGVL 603
+LNK IFETIYY AL+ S E+AAK+GPYETY S S+G LQ DMWN PS+ WDW +L
Sbjct: 526 ELNKKIFETIYYGALEASCELAAKDGPYETYKGSRASRGELQYDMWNGATPSNLWDWSLL 585
Query: 604 RDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHD 663
+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL+ D
Sbjct: 586 KSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHLVKD 645
Query: 664 LTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQ 723
L +G+W+ T+KN I+Y++GSVQ I IP E++ +YKTVWE+ T++ MA DRG +IDQ
Sbjct: 646 LAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAFIDQ 705
Query: 724 SQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
SQS N++M +P++ K+TS+HF W GLKTGMYYLR++ A +AI+FTVD
Sbjct: 706 SQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAVNAIQFTVD 754
>gi|428169292|gb|EKX38227.1| hypothetical protein GUITHDRAFT_158515 [Guillardia theta CCMP2712]
Length = 831
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/776 (59%), Positives = 600/776 (77%), Gaps = 20/776 (2%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
+ KRDG+++ + K+ AR+ +L GL+ + D + KV AG +G+ + ++DELAAE
Sbjct: 2 ITKRDGKKQPLKRFKLHARIARLVDGLNADFVDIDQIVDKVVAGTCQGIKSQEIDELAAE 61
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA + T+HPDY+ LAARI+VS LHK T+++FS+ IK +YNH + +SG K P IA D+YE
Sbjct: 62 TAAYLATDHPDYSQLAARISVSALHKVTQQTFSQKIKALYNHVHSKSGAKGPKIASDVYE 121
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
I+++NA LD+ I Y RDF +DYFG+KTLERSYLL+++G VVERPQ M MRVS+GIHK D
Sbjct: 122 IVIENAETLDAAIDYSRDFTFDYFGYKTLERSYLLRIEGHVVERPQDMFMRVSVGIHKQD 181
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
ID+AI+TY++MS ++FTHA+PTLFNAGTPR QLSSCFL+ +KDDSIEGIYET+ +CA IS
Sbjct: 182 IDAAIQTYNLMSLKFFTHATPTLFNAGTPRNQLSSCFLLQLKDDSIEGIYETVGKCATIS 241
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
AGGIG+SVHN+RA GSY+ ++G +NG++PML+VFN TAR QG GKR GAFAVYLE
Sbjct: 242 AQAGGIGISVHNVRARGSYVENSSGIANGLIPMLKVFNSTARLCSQGAGKRPGAFAVYLE 301
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWHA+IFEFL LKKN G E+ RARDLFYALW+PDLFM+R + +G WSLFCP EA GL +
Sbjct: 302 PWHAEIFEFLELKKNFGSEDLRARDLFYALWMPDLFMKRCEADGAWSLFCPVEAPGLCET 361
Query: 363 WGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGT 422
+G +FE+LY YEREG+A+K ++A+ LWF IL +Q+E G PY+L+KD N KSNQ+NLG
Sbjct: 362 YGEKFEELYERYEREGRARKTIKARELWFAILEAQVENGIPYLLYKDAANEKSNQKNLGI 421
Query: 423 IKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDF 482
IK SNLCTEI+EYTS E AVCNLASI LPRFV E FD
Sbjct: 422 IKCSNLCTEIMEYTSKDEVAVCNLASICLPRFVVEGQ--------------------FDH 461
Query: 483 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPE 542
+ L EVT ++T NLNKIID+N YPV+ A+ SN RHRPIGIGVQGLAD F+LL + FES E
Sbjct: 462 KLLFEVTIVITRNLNKIIDINLYPVKEAQTSNFRHRPIGIGVQGLADVFLLLRLPFESEE 521
Query: 543 AQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGV 602
A+QLN+DIFETIY+ A+ S+++A G Y ++ SP S G+LQ D+W PS RWDW
Sbjct: 522 ARQLNRDIFETIYFAAMTASNQLAKDHGAYSSFRGSPASMGLLQFDLWGAEPSPRWDWTS 581
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L++ I ++G+RNSL VAPMPTAST+QI+GNNECFEPYTSNIY+RRV++G+F+V+N HLL
Sbjct: 582 LKESIKEHGLRNSLTVAPMPTASTAQIMGNNECFEPYTSNIYNRRVMAGDFLVLNPHLLK 641
Query: 663 DLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYID 722
DL +G+WS +K++I+ DGS+Q I EIP++++ +YKT WEIKQ L+DMA DRG +ID
Sbjct: 642 DLIALGLWSQKMKHRIMAYDGSIQDILEIPKDIRELYKTAWEIKQRCLIDMAADRGAFID 701
Query: 723 QSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
QSQSLN+ ++ P+ K+TS+HF W +GLKTG+YYLR+RAAADAIKFT+D S E
Sbjct: 702 QSQSLNLFLEAPDTAKLTSMHFYAWRKGLKTGVYYLRTRAAADAIKFTLDHSTVVE 757
>gi|209878422|ref|XP_002140652.1| ribonucleoside-diphosphate reductase, large subunit
[Cryptosporidium muris RN66]
gi|209556258|gb|EEA06303.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Cryptosporidium muris RN66]
Length = 809
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/810 (58%), Positives = 612/810 (75%), Gaps = 23/810 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+ R G++E V FD+I +R+ KLSYGL DP V+Q V G+Y G+ TS+LDELA
Sbjct: 5 MYVINRRGKEEPVSFDQILSRISKLSYGLHP-LVDPARVAQAVINGMYSGIKTSELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
++T A M +HPD++ LAARI++SNLHKNT E + + + + G APL++ +
Sbjct: 64 SQTCAYMAASHPDFSKLAARISISNLHKNTHSDIFEVANQLIS-FKDVHGNPAPLLSQTV 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE I++N L+S I + RDF+YDYF FKTLERSYLL+V K+VERPQH+LMRVS GIH
Sbjct: 123 YEFIIENKDRLNSVIDFSRDFEYDYFAFKTLERSYLLRVDDKIVERPQHLLMRVSCGIHY 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+ID+AI+TY ++SQ++FTHA+PTLFNAGT RPQ+SSCF++ M DDSI+GI++TLK+CA
Sbjct: 183 GNIDAAIETYELLSQKYFTHATPTLFNAGTLRPQMSSCFILKMSDDSIDGIFDTLKKCAN 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+GV++ NIRA GSYIRGTNG SNG++PMLRV+NDTARYVDQGGGKRKGA AVY
Sbjct: 243 ISKTAGGLGVAISNIRAAGSYIRGTNGRSNGLIPMLRVYNDTARYVDQGGGKRKGALAVY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI EF+ ++KNHGKEE R RD+F ALW+PDLFMERV+ + W+L CP+E G+
Sbjct: 303 LEPWHADILEFIEIRKNHGKEEMRCRDIFPALWIPDLFMERVEKDANWTLMCPDECPGMQ 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG +F++LY HYE+EG+ +K ++AQ+LWF +L SQIETGTP++ +KD NRKSNQQNL
Sbjct: 363 DVWGDQFKELYEHYEKEGRGRKTIKAQSLWFALLQSQIETGTPFICYKDAANRKSNQQNL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYTS E AVCNLASI LPRFV +N+ F
Sbjct: 423 GTIKSSNLCTEIMEYTSSDEVAVCNLASIGLPRFVDR------------------ENKKF 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL EV + NLNK+ID YYP+ RRSNLRHRP+G+GVQGLAD F++L +ES
Sbjct: 465 DFKKLYEVVKVAIRNLNKVIDRGYYPIPECRRSNLRHRPLGLGVQGLADCFMILRYPYES 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD-RWD 599
+A++LN +IFETIYY AL S E+A K GPYET+ SP S+G+LQ D+WNV PS W+
Sbjct: 525 KDARKLNIEIFETIYYAALDASCELAEKYGPYETFQGSPASRGLLQFDLWNVQPSSGLWN 584
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W +L++ I+K G+RNSLLVAPMPTASTSQ+LGNNE FEP+TSNIY RRVLSGEF VVN H
Sbjct: 585 WDLLKEKIAKYGLRNSLLVAPMPTASTSQLLGNNESFEPFTSNIYHRRVLSGEFFVVNPH 644
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL E+G+W +K II ++GSVQ I IP +++ +YKTVWEI+Q ++DMA DRG
Sbjct: 645 LLNDLLELGLWDERLKQNIIANNGSVQNIESIPRDIRDLYKTVWEIRQKAVIDMAADRGP 704
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQSLNI++ N+ K++S+HF W +GLKTG YYLR+++AA+ I+FT+D + K
Sbjct: 705 YICQSQSLNIYIANANYAKLSSMHFYGWKKGLKTGSYYLRTQSAANPIQFTIDQQLLKST 764
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMAC 809
+K + D + A S + MAC
Sbjct: 765 ADKNK--EQDAKRPALQNSSQGDGRSVMAC 792
>gi|283481642|emb|CAZ69758.1| putative ribonucleoside-diphosphate reductase protein [Emiliania
huxleyi virus 99B1]
Length = 746
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/754 (62%), Positives = 577/754 (76%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
ETA +T HPDY+ LAARIAVS+LHK T FS + +YN+ N ++G +PLIADDI
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMDSLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E I NA D I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRV+IGIH
Sbjct: 119 IECIRSNADVFDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+D+AI+TY ++SQ+ FTHA+PT++NAGT PQ+SSCFL+ MKDDSIEGI++T+K CA+
Sbjct: 179 PDVDAAIETYKLLSQKKFTHATPTMYNAGTKNPQMSSCFLLKMKDDSIEGIFDTIKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYI GT G SNG+VPMLRVF+ TARYVDQGGG+RKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYISGTGGYSNGLVPMLRVFDSTARYVDQGGGRRKGAFAMY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEP HADIFEFL L+KN GKEE RARDLFYALWV D FM+RV+ WSLFCP+E GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG ++ LY YE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEIIEYT+P ETAVCNLASIALP FV++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPSFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L ++F+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKISFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ S ++A +G Y TY SP+S G Q DMWNV PS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSNGKFQFDMWNVTPSVRWNW 578
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL++ G+W ++KN II +GSVQ IP PE+LK IYKTVWEI TL+DMA DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
I QSQS N+ M QP K+TS+HF W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|399218487|emb|CCF75374.1| unnamed protein product [Babesia microti strain RI]
Length = 813
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/785 (60%), Positives = 595/785 (75%), Gaps = 30/785 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VV R G E V FD+I R++KL YGL DP V++ V G+Y G+ TSQLDELA
Sbjct: 1 MFVVNRKGEDEPVSFDQILHRIQKLCYGLHP-IVDPPRVTKNVINGMYSGIPTSQLDELA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M NHPD++ LAARI + NLHKNT + E++ ++ ++ + +G +PL+ D +
Sbjct: 60 AQTCAYMAANHPDFSKLAARIIIDNLHKNTFDNI-ESVANLLYNFKDSNGNHSPLLNDKV 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ I+++ ++ EI YD DF YDYFGFKTLERSYLL+V GK+ ERPQH+L+RV+ GIH
Sbjct: 119 YKFIIQHKDRINKEIDYDMDFQYDYFGFKTLERSYLLRVNGKIAERPQHLLVRVACGIHS 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID A++TY+ MS++ F HA+PTLFN+GT PQ+SSCFL+ +KDDSI GI++TL +CA+
Sbjct: 179 NDIDRAMETYNYMSKKLFIHATPTLFNSGTKFPQMSSCFLLDIKDDSISGIFDTLTQCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRA+ SYIRGTNG SNGI+PMLR+FNDTARYVDQGGGKRKG+FA+Y
Sbjct: 239 ISKTAGGIGLAIHKIRASSSYIRGTNGHSNGIIPMLRIFNDTARYVDQGGGKRKGSFAIY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHG EE RARDLFYALW+PDLFM+RV+ N W+L CP+E GL
Sbjct: 299 LEPWHADIFEFLDLRKNHGSEESRARDLFYALWIPDLFMKRVEANENWTLMCPDECRGLD 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
WG EFEKLYT YE +G +K V AQ LWF IL SQIETGTPYML+KD CN KSNQ+N+
Sbjct: 359 QVWGEEFEKLYTSYESKGMGRKTVPAQTLWFAILQSQIETGTPYMLYKDACNYKSNQKNI 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI++YTSP E AVCNLAS+ALP++V K + F
Sbjct: 419 GTIKSSNLCCEIVQYTSPNEVAVCNLASLALPKYVNTKTLE------------------F 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+ L I+T NLN+IID NYYPV A SN RHRPIG+GVQGLADTF+L+ FES
Sbjct: 461 DFKLLHSACKILTFNLNRIIDENYYPVPEAEYSNKRHRPIGVGVQGLADTFMLMRYPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-WD 599
EA++LN IFETIY+ L+ S E+A K GPYET+ SP S+G+LQ D+WN D ++
Sbjct: 521 QEARELNVRIFETIYHGCLEESVELAKKYGPYETFEGSPASQGLLQFDLWNRKVDDNFYN 580
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQIL---------GNNECFEPYTSNIYSRRVLS 650
W ++ I K G+RNSLLVAPMPTASTSQIL GN+E FEPYT NIY RRVLS
Sbjct: 581 WTEMKKDIMKYGLRNSLLVAPMPTASTSQILVLTYYPNYIGNSESFEPYTCNIYYRRVLS 640
Query: 651 GEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTL 710
GEF VVN HLL+DL ++ +W+ +K K+I +GS+Q I EIP+ELK +YKTVWEIKQ +
Sbjct: 641 GEFFVVNPHLLNDLVQLDLWNDQMKQKLIAYNGSLQNIDEIPQELKNLYKTVWEIKQKAI 700
Query: 711 VDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFT 770
+DMA DRG +IDQSQSLNI+M+QP + K++S+HF W +GLKTG+YYLR++ AADAIKFT
Sbjct: 701 IDMAADRGAFIDQSQSLNIYMEQPTYAKLSSMHFYGWKKGLKTGVYYLRTQPAADAIKFT 760
Query: 771 VDTSV 775
VD +
Sbjct: 761 VDNQI 765
>gi|307196361|gb|EFN77956.1| Ribonucleoside-diphosphate reductase large subunit [Harpegnathos
saltator]
Length = 849
Score = 991 bits (2563), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/836 (58%), Positives = 611/836 (73%), Gaps = 43/836 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+GR+E VHFDKIT+R+ K Y L+ + DP V+ +V G+Y GVTT +LD LA
Sbjct: 32 MHVIKRNGRKEDVHFDKITSRIAKQCYSLNMNYVDPSAVAIQVIRGLYSGVTTVELDNLA 91
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA M T HPDYA LAARI VSNLHK TKKSFSE + D++ + + P+I++
Sbjct: 92 AETAATMATQHPDYAILAARIDVSNLHKETKKSFSEVMHDLHYARDPITNEPNPVISEHY 151
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y II +NA LDS IIYDRDF+Y+Y GFKTLERSYLLK+ GK+VERPQHMLMRV++GIH+
Sbjct: 152 YNIIKRNAERLDSAIIYDRDFNYNYMGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHE 211
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ I+TY +S+R+FTHASPTLFNA T Q+SSCFL+ + DDSI+GIY TLK+CA+
Sbjct: 212 DDINKVIETYDYLSERYFTHASPTLFNACTKNQQMSSCFLLTLNDDSIKGIYGTLKKCAL 271
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRA + +NG++ +L+++ND A YVDQGG KR GAFAVY
Sbjct: 272 ISKYAGGIGINVHCIRAKDTDDTYDTDATNGLISVLKLYNDIAIYVDQGGNKRPGAFAVY 331
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL LK+N G RARDLFYALWVPDLFMERV + WSL CP E+ GLA
Sbjct: 332 LEPWHADIFDFLELKRNIGDGNLRARDLFYALWVPDLFMERVFDDEVWSLMCPYESPGLA 391
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EF +LYT YE+EG+ K+ VQA+++W IL SQ+ETGTPYML+KD CNRKSN Q+L
Sbjct: 392 DVWGDEFNELYTRYEKEGRYKRQVQARDVWVTILRSQVETGTPYMLYKDHCNRKSNHQHL 451
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EY+SP E AVCNLASIAL FV + + F
Sbjct: 452 GTIKCSNLCTEIVEYSSPEEVAVCNLASIALNMFV------------------NTNKKTF 493
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL V IVT NL+K+IDVN+YP+ +RSN RHRPIGIGVQGLAD F+L+ FES
Sbjct: 494 DFDKLKTVVKIVTRNLDKVIDVNFYPIPETKRSNRRHRPIGIGVQGLADAFLLMRYPFES 553
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFET+YY AL+ S E+AA++G YETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 554 KEAKELNIKIFETLYYGALEASCELAAEKGTYETYEGSPVSKGILQYDMWNVKPTDLWDW 613
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY RRVLSGEFV++N HL
Sbjct: 614 DELKTKIAKHGVRNSLLIAPMPTASTAQILGNNESIEAYTSNIYVRRVLSGEFVIINPHL 673
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT G+W ++N+I+ + GSVQ I IP++LK +YKTVWEI Q +++MA DRG +
Sbjct: 674 LRDLTVRGLWGKDMQNEILANFGSVQNIERIPDDLKELYKTVWEISQKVILEMAADRGAF 733
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK--- 777
IDQSQSLNIH+ P+ +K+TS+HF W GLKTGMYYLR++ AA+ I+FTVD S +
Sbjct: 734 IDQSQSLNIHIADPSTEKLTSMHFFGWRSGLKTGMYYLRTKPAANPIQFTVDKSKLQSRD 793
Query: 778 --------------------EKPEKPELVVDDETK--MAQVVCSLTNREECMACGS 811
+ EK L+ K A + C+ N++ CMAC S
Sbjct: 794 SLSSSTSDISSPIKSPDKDADNSEKRNLINQQANKNLEAMLACARENKDACMACSS 849
>gi|171399|gb|AAA34569.1| ribonucleotide reductase DNA damage-inducible regulatory subunit,
partial [Saccharomyces cerevisiae]
Length = 756
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/777 (60%), Positives = 593/777 (76%), Gaps = 27/777 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDYA+LAARIA+SNLHK T K FS+ I+D+++ N +G AP+I+D+I
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+M+ L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRV++GIH
Sbjct: 121 YNIVME-TRYLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI+S +KTY++MS R+FTHASPTLFNAGTP PQ+SSCFL+ MKDDSIEGIY+TLKECA+
Sbjct: 180 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPLPQMSSCFLIAMKDDSIEGIYDTLKECAM 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AG + ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYV R +
Sbjct: 240 ISKTAGVLS-HINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYV-----TRVVTRDLV 293
Query: 301 LEP--WHADI---FEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
L P W + +++K HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+
Sbjct: 294 LSPFSWSHGMQISSTKFDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSA 353
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
A GL D WG EFE+LYT YEREG+ K ++AQ LW+ IL +Q ETGTP+M++KD CNRK+
Sbjct: 354 APGLDDVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKT 412
Query: 416 NQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGS 475
NQQNLGTIKSSNLC EI+EY+SP ETAVCNLASIALP FV S
Sbjct: 413 NQQNLGTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDG 458
Query: 476 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
K ++FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L
Sbjct: 459 KTASYNFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLR 518
Query: 536 MAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS 595
+ FES EAQ LNK IFETIY+ L+ S E+A KEG Y T+ SP SKGILQ DMWN P
Sbjct: 519 LPFESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPF 578
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
WDW LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF V
Sbjct: 579 GMWDWETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQV 638
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VN +LL DL ++GIW ++K +I +GS+Q +P +P+ELK +YKTVWEI Q T+++MA
Sbjct: 639 VNPYLLRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAA 698
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
DR YIDQS SLN+ + P+ K+TS+HF W +GLKTGMYYLR++AA+ AI+FT+D
Sbjct: 699 DRAIYIDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTID 755
>gi|187903102|ref|YP_001883393.1| ribonucleoside diphosphate reductase large subunit, rr1 [Musca
domestica salivary gland hypertrophy virus]
gi|187384751|gb|ACD03524.1| ribonucleoside diphosphate reductase large subunit, rr1 [Musca
domestica salivary gland hypertrophy virus]
Length = 785
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/774 (59%), Positives = 598/774 (77%), Gaps = 25/774 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V KR G + + FDKI R++ L Y L+ ++ P + KV AG+Y GVTT++LD LA
Sbjct: 8 LFVTKRGGFVQDIVFDKIRKRIESLCYNLNADYVHPSTIVVKVVAGLYPGVTTAELDTLA 67
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA+M T HPDY LAARIA+SN+HK T SF+ T+K++Y A LI+
Sbjct: 68 AETAASMMTLHPDYGVLAARIAISNMHKQTDDSFARTMKELY---------AAGLISMFH 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+++ ++ LD I++ DF+Y YFG KTLERSYL+ ++ ++VERPQ++LMR ++GIH
Sbjct: 119 YDVVCRHGRTLDEAIVHANDFNYSYFGIKTLERSYLMHIKDRLVERPQYLLMRCALGIHG 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
++ID+ I+TY+ MS+ +FTHA+PTLF+A TP+PQLSSC+L+ +K DSI+GI+ T+ +CA
Sbjct: 179 ENIDAVIETYNYMSRHYFTHATPTLFSAATPKPQLSSCYLLTIKGDSIDGIFRTVADCAA 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH+IRA GS I GTNG SNG+VPMLRVFN+ ARYVDQGGGKR G+FA+Y
Sbjct: 239 ISKTAGGIGLNVHDIRARGSPIDGTNGKSNGLVPMLRVFNNVARYVDQGGGKRMGSFAIY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHG EE RARDLFYALW+PDLFM RV+ +G WSL CP++ L+
Sbjct: 299 LEPWHADIFEFLDLRKNHGIEEQRARDLFYALWIPDLFMRRVEQDGDWSLMCPHKCPCLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG FE LY HYER+G+A + V+A+ LW I+ SQ+ETGTPYM++KD CNRKSNQQNL
Sbjct: 359 EVWGESFEHLYEHYERKGRAVRTVKARALWHAIIESQVETGTPYMMYKDACNRKSNQQNL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLCTEI+EYT+P E AVCNLAS+ALP+FV V P R + F
Sbjct: 419 GTIRCSNLCTEIVEYTAPDEIAVCNLASLALPKFV------VSGTPDR--------PKHF 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFE+L + +VT NLN+IID+NYYPV ARRSNLRHRPIGIGVQGLADTF+L+GM +ES
Sbjct: 465 DFEQLRRIVHVVTRNLNRIIDINYYPVPEARRSNLRHRPIGIGVQGLADTFVLMGMPYES 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR--W 598
EA++LN+ IFETIY+ AL+TS ++A +EG Y+++ SP S G LQ DMW V D+ W
Sbjct: 525 DEARELNRRIFETIYFAALETSCQLAKEEGVYDSFLGSPASIGTLQQDMWPVDVDDKPMW 584
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
+W LR I NG+RNSLLVAPMPTAST+QILGN E FEP TSNIY RRVLSGEF V+N+
Sbjct: 585 NWDELRHNIEMNGLRNSLLVAPMPTASTAQILGNTESFEPITSNIYVRRVLSGEFQVINR 644
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
HL+ L ++G+WS +++N+II GSVQ I EIP E++ +YKTVWEI ++DMA DRG
Sbjct: 645 HLVQHLIDLGLWSESMRNRIIARRGSVQDIEEIPIEVRRLYKTVWEISGRRIIDMAADRG 704
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
YIDQSQSLN+H+ +PN+ K++S+HF W GLKTGMYYLR++AAA+AI+FTVD
Sbjct: 705 RYIDQSQSLNMHVAEPNYAKLSSMHFYAWRAGLKTGMYYLRTKAAANAIQFTVD 758
>gi|403366375|gb|EJY82990.1| Ribonucleoside-diphosphate reductase [Oxytricha trifallax]
Length = 864
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/771 (60%), Positives = 592/771 (76%), Gaps = 22/771 (2%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V KR+G EA+ KI ARL+KL L+ ++ + ++ KV + G+ T+ LD L +E
Sbjct: 23 VTKRNGTMEAMQVGKIRARLEKLLENLAYKYINLDIIITKVVSYAQNGIKTTDLDNLLSE 82
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
T A + HPDY LA+R+AV+ LHK T + F E I +YN Y E + A LIA+D+Y+
Sbjct: 83 TTAYLNILHPDYGKLASRVAVTKLHKETSEDFFEVISTLYN-YTEYARGDAALIAEDVYK 141
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
++ +N L + + Y RD+DYDYFGFKTLERSYLLKV K+VERPQHMLMRVS+GIHK D
Sbjct: 142 VVEENKEKLQAALNYKRDWDYDYFGFKTLERSYLLKVNSKIVERPQHMLMRVSVGIHKKD 201
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
IDSAI+TY++MS RWFTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI GIY+TLK A+IS
Sbjct: 202 IDSAIETYNLMSDRWFTHATPTLFNAGTPKPQMSSCFLLMMKDDSINGIYDTLKNIALIS 261
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
KSAGG+G++VHNIRATGSYI+GTNG SNG+VPMLRVFN+TARYVDQGGGKRKG+FA+YLE
Sbjct: 262 KSAGGVGLAVHNIRATGSYIKGTNGHSNGLVPMLRVFNETARYVDQGGGKRKGSFAIYLE 321
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWHAD+F+FL L+KNHGKEE RARDLF+ALW+PDLFM+RVQ +G W+LFCPNEA GL +
Sbjct: 322 PWHADVFDFLQLRKNHGKEEQRARDLFFALWIPDLFMKRVQADGDWTLFCPNEAKGLFEV 381
Query: 363 WGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGT 422
G EFE LYT YE++G +K ++AQ LW I+ SQIETGTPYML+KD N KSNQ+NLGT
Sbjct: 382 HGQEFEALYTKYEQQGIGRKTMKAQKLWEAIIESQIETGTPYMLYKDHANSKSNQKNLGT 441
Query: 423 IKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDF 482
IKSSNLC EIIEYTSP E AVCNLASI+LPR+V K+ FD+
Sbjct: 442 IKSSNLCCEIIEYTSPDEVAVCNLASISLPRYV--------------------KDGVFDY 481
Query: 483 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPE 542
EKL +VT +T NLN+IID N+YP + A+ SN+RHRPIGIG+QGLAD +LL + FE
Sbjct: 482 EKLHKVTYQITINLNRIIDGNFYPCDEAKNSNMRHRPIGIGIQGLADALMLLKIPFEDER 541
Query: 543 AQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN-VIPSDRWDWG 601
A Q N++IFETIY+ ++++S ++A EG Y+++ SP+S+GI Q DMWN +PS+R++W
Sbjct: 542 AYQFNQEIFETIYHASMQSSVDLAKVEGHYQSFPGSPLSQGIFQYDMWNEKLPSNRYNWE 601
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR+ + K G RNSLLVAPMPTASTSQILGNNE FEPYT+NIY+RRVL+GEFV VN HL+
Sbjct: 602 TLREEVKKFGARNSLLVAPMPTASTSQILGNNESFEPYTTNIYTRRVLAGEFVCVNPHLV 661
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL + +W+ ++N+++ +GS+Q I IP+++K +YKT+WEI Q L+++A R +I
Sbjct: 662 RDLISLDLWTQEVRNQLVGHNGSIQSISGIPDDIKKLYKTIWEIPQKQLINLARARAPFI 721
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
QSQSLNI+M + + K++S HF W GLKTG YYLR+R A DAIKFT+D
Sbjct: 722 CQSQSLNIYMGEATYTKLSSAHFYAWQLGLKTGQYYLRTRPARDAIKFTLD 772
>gi|332023837|gb|EGI64061.1| Ribonucleoside-diphosphate reductase large subunit [Acromyrmex
echinatior]
Length = 854
Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/849 (57%), Positives = 611/849 (71%), Gaps = 64/849 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+GR+E VHFDKIT+R+ K Y L + DP V+ +V G+Y GVTT LD LA
Sbjct: 32 MHVIKRNGRKEDVHFDKITSRIVKQCYNLDMNYVDPSAVAIQVIRGLYSGVTTVVLDNLA 91
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMY-------NHYNERSGLKA 113
AETAA M T HPDYA LAARI VSNLHK TKKSFSE + D++ NHYN
Sbjct: 92 AETAATMATKHPDYAILAARIDVSNLHKETKKSFSEVMHDLHYAKNPVTNHYN------- 144
Query: 114 PLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMR 173
P+I+ Y II NA LDS IIYDRDF+Y+Y GFKTLERSYLLK+ GK+VERPQHMLMR
Sbjct: 145 PIISKHYYNIIKNNAEKLDSAIIYDRDFNYNYIGFKTLERSYLLKINGKIVERPQHMLMR 204
Query: 174 VSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
V++GIH+++ID I+TY+ +S+R+FTHASPTLFNA T Q+SSCFL+ ++DDSI+ I+
Sbjct: 205 VAVGIHENNIDKVIETYNYLSERYFTHASPTLFNACTNNQQMSSCFLLTLEDDSIKSIFG 264
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
TLK CA+ISK AGGIG++VH IRA T T NG++ +L+++ND A YVDQGG KR
Sbjct: 265 TLKNCALISKYAGGIGLNVHCIRAKNVEDTSTKRT-NGLISILKLYNDMAIYVDQGGNKR 323
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
GAFA+YLEPWHADIF+FL LK+N G RARDLFY LW+PDLFMERV + WSL CP
Sbjct: 324 PGAFAIYLEPWHADIFDFLELKRNIGDGNMRARDLFYGLWIPDLFMERVYNDEMWSLMCP 383
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNR 413
+E+ GL+D WG EF++LYT YE+EG+ KK V+A+++W IL SQ+ETGTPYML+KD CNR
Sbjct: 384 HESPGLSDVWGDEFKELYTRYEKEGRYKKQVEARSVWLAILRSQVETGTPYMLYKDHCNR 443
Query: 414 KSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSR 473
KSN Q++GT+K SNLCTEIIEY+ P E AVCNLASIA+ FV
Sbjct: 444 KSNHQHIGTVKCSNLCTEIIEYSGPGEVAVCNLASIAVNMFV------------------ 485
Query: 474 GSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
+ FDF+KL V IVT NL+K+IDVN+YP+E R SN RHRPIGIG+QGLAD F+L
Sbjct: 486 NIDTKIFDFDKLKTVAKIVTRNLDKVIDVNFYPIEETRTSNHRHRPIGIGIQGLADAFLL 545
Query: 534 LGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVI 593
+ FES EA++LN IFET+YY AL+ S E+AA++G YETY SPVSKGILQ DMWNV
Sbjct: 546 MRYPFESKEAKELNIKIFETLYYGALEASCELAAEKGTYETYQGSPVSKGILQYDMWNVK 605
Query: 594 PSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEF 653
P++ WDW L+ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF
Sbjct: 606 PTNLWDWDELKAKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYVRRVLSGEF 665
Query: 654 VVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDM 713
++VN HLL DLT G+W +KN+I+ + GSVQ I IP++LK +YKTVWEI Q +++M
Sbjct: 666 IIVNPHLLRDLTSRGLWDEDMKNEILANFGSVQNIERIPDDLKELYKTVWEIPQKVILEM 725
Query: 714 AVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD- 772
A DRG ++DQSQSLN+H+ P +K+TS+HF W GLKTGMYYLR++ AA+ I+FTVD
Sbjct: 726 AADRGAFVDQSQSLNVHIGDPTTEKLTSMHFFGWKSGLKTGMYYLRTKPAANPIQFTVDK 785
Query: 773 ----------------TSVFKEKP-EKPELVVDDETKM-------------AQVVCSLTN 802
TSV P + P DD+ + A + CS N
Sbjct: 786 SKLQNRDSVSNVSDASTSVVNSTPIQSPNQDSDDDAEKRKQLSTQARKNLDAMLACSRKN 845
Query: 803 REECMACGS 811
+E+CMAC S
Sbjct: 846 KEDCMACSS 854
>gi|145497945|ref|XP_001434961.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402089|emb|CAK67564.1| unnamed protein product [Paramecium tetraurelia]
Length = 840
Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/814 (58%), Positives = 601/814 (73%), Gaps = 41/814 (5%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV+KRDG ++ + KI RL+ L+ L +H + L+ KV G+Y+G+TT QLD LAA
Sbjct: 23 YVLKRDGGKQNIDIQKIAERLQNLASNL--QHININLIMWKVIQGMYEGITTVQLDNLAA 80
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ET A M HP Y+ LAARIAV+NLHK T +SFSE +++ + ++ G APLIADD+Y
Sbjct: 81 ETCAYMNLVHPQYSLLAARIAVNNLHKETSESFSEVATKLHS-FTDKYGRPAPLIADDVY 139
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+IIM+N + +EI YDRD+ YD+FGFKTLERSYLLK K +ERPQ +LMRVSIGIHK+
Sbjct: 140 KIIMENKDIIQNEINYDRDYQYDFFGFKTLERSYLLKEGKKPIERPQQLLMRVSIGIHKE 199
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
D+ SA +TYH+MSQ++FTHA+PTLFN+GTP PQ+SSCFL+ M DDSIEGIYETLK CA+I
Sbjct: 200 DLQSAFQTYHLMSQKYFTHATPTLFNSGTPYPQMSSCFLLDMVDDSIEGIYETLKRCALI 259
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG+S IR+ SYIRGTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+YL
Sbjct: 260 SKSAGGIGLSASKIRSQDSYIRGTNGISNGLVPMLKVFNDTARYVDQGGGKRKGSFAIYL 319
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWH+DI FL L+KNHG EE RARDLF LW+PDLFM+RV+ + W+L CPNE GL D
Sbjct: 320 EPWHSDIISFLQLRKNHGIEEQRARDLFLGLWIPDLFMQRVKDDSDWTLMCPNECPGLQD 379
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
C+G EF KLYT YE + + ++A+ LW EI+ +QI TG PYML+KD CN KSNQ+NLG
Sbjct: 380 CYGQEFNKLYTDYESKNMGRVTMKARQLWQEIIDAQISTGLPYMLYKDACNSKSNQKNLG 439
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLCTEII+YTSP E AVCNLASI L + ++E ++ FD
Sbjct: 440 TIKSSNLCTEIIQYTSPDEIAVCNLASINLQKLIKE-------------------DKTFD 480
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+KL E+T I+T NLN +ID+N+YPV+ A SN R+RPIGIGVQG AD + + F+S
Sbjct: 481 FDKLLEITKIITINLNIVIDLNFYPVKQAEYSNKRNRPIGIGVQGFADALQRMKIPFDSE 540
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
+A +LN IFETIYY A +TS E+A K GPYET+ SP S+GILQ DMW V P +DW
Sbjct: 541 DALELNAKIFETIYYGACQTSLELAQKLGPYETFTGSPASQGILQFDMWGVSPK-LYDWN 599
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+K+G+RNSLL+APMPTASTSQIL NNE FEPYT+NIY+RRVL+GEFV +N HL+
Sbjct: 600 TLKQNIAKHGMRNSLLIAPMPTASTSQILQNNESFEPYTTNIYTRRVLAGEFVCINPHLV 659
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL E+ +W+P IKNK+I ++GSVQ I EIP +K +YKTVWEI Q ++++A R +I
Sbjct: 660 DDLIELNLWTPQIKNKLIMNNGSVQNIEEIPNNIKSLYKTVWEISQKAILNLATSRAPFI 719
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKT---------GMYYLRSRAAADAIKFTVD 772
DQSQSLNIHM +P KVTS+HF +G+K GMYYLR+R AAD IKFTVD
Sbjct: 720 DQSQSLNIHMAEPTMSKVTSMHFYAGRKGVKNRYILYITIKGMYYLRTRPAADPIKFTVD 779
Query: 773 T-SVFKE------KPEKPELVVDDETKMAQVVCS 799
++ KE + K EL+ DE+ ++V +
Sbjct: 780 VEALLKEGGQIKIQSSKQELI--DESASKKIVTN 811
>gi|156541405|ref|XP_001600772.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Nasonia vitripennis]
Length = 797
Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/816 (57%), Positives = 612/816 (75%), Gaps = 33/816 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G ++ V+FDKIT R++KL +GL+ ++ DP+ ++Q V G+Y GV T +LD LA
Sbjct: 7 MHVLKRNGFKQEVNFDKITQRIRKLCHGLNMDYIDPLAITQCVINGLYPGVKTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA MTT HPDYA LAARI +S+LHK +K+FSE + D+Y + + P+I+++
Sbjct: 67 AEIAATMTTKHPDYAILAARIVISSLHKENRKTFSEVMDDLYKVIDPITKEHKPMISEEY 126
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
II K+ L+S I YDRDF ++YFGFKTLE+SYL ++ G+VVERPQ MLMRV++ +HK
Sbjct: 127 NNIIQKHKDRLNSAIDYDRDFVFNYFGFKTLEKSYLFRINGQVVERPQDMLMRVAVALHK 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRP------QLSSCFLVCMKDDSIEGIYET 234
+D++ I+TY+ S+R+FTHASPTLF P S CF++ M +DSIEGI+ET
Sbjct: 187 EDLEKVIETYNYTSERYFTHASPTLFFCMYYTPTNVQVKNTSDCFILTMIEDSIEGIFET 246
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
LK CA+ISKSAGGIG+SVHNIRA G+ I NG +NG+VPM+RVFN+T R++DQGG KR
Sbjct: 247 LKRCAIISKSAGGIGISVHNIRAKGTAIASNNGFANGLVPMIRVFNNTVRFIDQGGNKRP 306
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GAFA+YLEPWHADIFEFL+LKKN GKEE+RAR+LFYALW+PDLFM+RV N +WSL CP+
Sbjct: 307 GAFALYLEPWHADIFEFLDLKKNIGKEEYRARELFYALWIPDLFMQRVLDNEKWSLMCPH 366
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
E GL D WG EF KLY YE E + K+ + A++LW IL +Q+ETGTPYML+KD CNRK
Sbjct: 367 ECPGLPDVWGDEFNKLYIKYEEEKRYKRQIVARDLWTAILKAQVETGTPYMLYKDHCNRK 426
Query: 415 SNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRG 474
SNQQNLGTIKSSNLCTEII+Y+SP E AVCNLASIA+ FV DV
Sbjct: 427 SNQQNLGTIKSSNLCTEIIQYSSPNEVAVCNLASIAVNMFV---DV-------------- 469
Query: 475 SKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILL 534
+ ++++F KL EV V +NL+KIID+N+YP+ A +SNL HRP+GIGVQGLAD F+L+
Sbjct: 470 -ETQYYNFLKLKEVVKTVAKNLDKIIDLNHYPLIEAEKSNLMHRPVGIGVQGLADAFLLM 528
Query: 535 GMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP 594
FES EAQQLN IFET+Y+ AL+ S E+A + GPY +Y+ SPVSKGILQ DMWNV P
Sbjct: 529 RYPFESKEAQQLNIQIFETLYFGALEASCELAKENGPYSSYNGSPVSKGILQYDMWNVTP 588
Query: 595 SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
++ WDW L+ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF+
Sbjct: 589 TNLWDWAALKLKIAKYGVRNSLLLAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFI 648
Query: 655 VVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMA 714
+VN HLL+DLT+ +W +KN+II ++GS+Q + I ++LK +YKTVWEI Q ++ MA
Sbjct: 649 IVNPHLLNDLTKRNLWDDEMKNEIIANNGSIQNVGHITQDLKELYKTVWEIPQKIILKMA 708
Query: 715 VDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
DRG +IDQSQS+N+HM +P +K+TS+HF W GLKTGMYYLR++ AA+A++FTV+ S
Sbjct: 709 ADRGAFIDQSQSVNVHMAKPTTEKLTSMHFYGWKAGLKTGMYYLRTKPAANALQFTVNKS 768
Query: 775 VFKEKPEKPELVVDDETKMAQVVCSLTNREE-CMAC 809
+ +P E V + + + N+E+ CM C
Sbjct: 769 LL--RPHATEEVKEKSNTI------MENKEDACMMC 796
>gi|154340341|ref|XP_001566127.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063446|emb|CAM39626.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 799
Score = 983 bits (2540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/816 (57%), Positives = 609/816 (74%), Gaps = 31/816 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
++KR+G + KI R +++ GL ++H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQTYDASKIRRRFERVMEGLDSDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY + R+ ++LHK T +S ET + +++H ++ APL+ADD++E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTSESLLETFRLLHDHVTVQTHRPAPLVADDVWE 127
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVSIG 177
++ ++ L S I Y RD ++++FG+KTLERSYLL+++ ++VERPQ M MRV++G
Sbjct: 128 VMQQHHKELQSMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH D+++ +TY++MS +FTHA+PTLFNAGTP+PQ+SSCFLV KDDSI+GIY+TLKE
Sbjct: 188 IHGRDLNNVRETYNLMSMGFFTHATPTLFNAGTPKPQMSSCFLVASKDDSIDGIYDTLKE 247
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAVISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWHAD+F FL LK+N GK++ RARDLFYALW+PDLFM+RV++ G+W+L PN
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMKRVKSEGRWTLMDPNTCP 367
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GL+DC G FE+LY YE EG+ K +QAQ +WF IL SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCHGEAFERLYERYEAEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTSP ETAVCNLASIALPRFV DV +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPEETAVCNLASIALPRFV---DV---------------EK 469
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
R F+ + L VT +T NLN++ID NYYPVETARRSN+R+RPIG+GVQGLADTFIL+ +
Sbjct: 470 REFNHQLLYAVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADTFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIP-S 595
F S EAQ++N +IFETIY+ A+++S E+A +EGPYET+ SP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEEGPYETFKGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RWDW L++ + + G+RNSLLV+PMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGIRNSLLVSPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VNK+L+ DL G+W+ ++N+II +GS+ I IP++LK +Y+TVWEI Q L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNEQMRNEIISYNGSILNIDGIPDDLKELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ + P ++TS+ F W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYGWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 FKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
KE E+ + ++ ++ EEC+ CGS
Sbjct: 770 LKEIQER------ESSQQTMSSHRVSQPEECLNCGS 799
>gi|2244677|emb|CAA67423.1| ribonucleotide reductase [Spodoptera littoralis NPV]
Length = 781
Score = 983 bits (2540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/769 (59%), Positives = 585/769 (76%), Gaps = 19/769 (2%)
Query: 5 KRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETA 64
KRDGR+E V KI R++K YGL +P ++++V G+Y GVTT +LD L AETA
Sbjct: 4 KRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIAETA 63
Query: 65 AAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEII 124
A+MT +H DY+ LAAR+AVSNLHK TK F I DMY ++++G P+I+D Y II
Sbjct: 64 ASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMISDFHYGII 123
Query: 125 MKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDID 184
NA L+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRV+IGIH DID
Sbjct: 124 AANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGRDID 183
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKS 244
+AI+TY++MS +FTHASPTLF+A TP+ Q+SSCFLV +K+DSIEGIY+TLK+CA+ISKS
Sbjct: 184 AAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMISKS 243
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+EPW
Sbjct: 244 GGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYVEPW 303
Query: 305 HADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWG 364
HAD+F+FL+LKKN GKEE RAR+LFYALW+PDLFM RV+T+ WSL CP ++ GLA
Sbjct: 304 HADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLAIVTV 363
Query: 365 AEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIK 424
EFE LY YE++G+ K V AQ LW I+ +Q+ETGTPYML+KD+CNRKSNQ NLGTIK
Sbjct: 364 FEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLGTIK 423
Query: 425 SSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEK 484
SNLCTEI+EYTS E AVCNLASIA+ +FV + +DFE+
Sbjct: 424 CSNLCTEIVEYTSKDEVAVCNLASIAVNKFV------------------APQPGVYDFER 465
Query: 485 LAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQ 544
L E+T NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + M FES A
Sbjct: 466 LKEITKSCDRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPFESDAAA 525
Query: 545 QLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN-VIPSDRWDWGVL 603
+LNK IFETI+Y AL+ + E+AAK+GPYETY SP S+G LQ DMWN PS+ WDW +L
Sbjct: 526 ELNKKIFETIFYGALEANCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWDWSLL 585
Query: 604 RDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHD 663
+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL+ D
Sbjct: 586 KSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHLVKD 645
Query: 664 LTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQ 723
L +G+W+ T+KN I+Y++GSVQ I IP E++ +YKTVWE+ T++ MA DRG +IDQ
Sbjct: 646 LAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAFIDQ 705
Query: 724 SQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
SQS N++M +P++ K+TS+HF W GLKTGMYYLR++ A ++I+FTVD
Sbjct: 706 SQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAVNSIQFTVD 754
>gi|297837607|ref|XP_002886685.1| hypothetical protein ARALYDRAFT_893641 [Arabidopsis lyrata subsp.
lyrata]
gi|297332526|gb|EFH62944.1| hypothetical protein ARALYDRAFT_893641 [Arabidopsis lyrata subsp.
lyrata]
Length = 688
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/636 (73%), Positives = 537/636 (84%), Gaps = 38/636 (5%)
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMM 193
EI+YDRDFDYD+FGFKTLER YLLKV GKVVERPQHMLMRV +GIH +DIDSAIKTYH+M
Sbjct: 81 EIVYDRDFDYDFFGFKTLERLYLLKVHGKVVERPQHMLMRVVVGIHMEDIDSAIKTYHLM 140
Query: 194 SQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVH 253
SQR FTHASPTLFNAGTPRPQLSS FL+CM+DDSIE TL++C VI KSAG I VSVH
Sbjct: 141 SQRLFTHASPTLFNAGTPRPQLSSSFLICMRDDSIES---TLQKCDVIRKSAGSISVSVH 197
Query: 254 NIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLN 313
NI+ T NG+VPML V DQGGGK+ G FAVYLEPWHADIFEFL
Sbjct: 198 NIQGT-----------NGVVPMLDV--------DQGGGKKNGPFAVYLEPWHADIFEFLK 238
Query: 314 LKKNHGK-----EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFE 368
++KNHGK EEH A ALW+PDLFMERV+ +G+WSLFCPNEA GLADCWG EFE
Sbjct: 239 IQKNHGKVQNSQEEHMA----IALWIPDLFMERVKHDGKWSLFCPNEAPGLADCWGTEFE 294
Query: 369 KLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNL 428
+LYT YEREGKAKKV AQ +F+ILTSQ+ETG PYMLFKD+CNRKSNQQNLGTIKSS+L
Sbjct: 295 RLYTKYEREGKAKKVFPAQEPFFDILTSQLETGMPYMLFKDSCNRKSNQQNLGTIKSSSL 354
Query: 429 CTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEV 488
CT +IEYTSPTET VCNLASIAL DVP++SHPS++ GS SK+R+FD++KLAEV
Sbjct: 355 CTGVIEYTSPTETTVCNLASIAL-------DVPLDSHPSKLAGSLRSKSRYFDYDKLAEV 407
Query: 489 TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNK 548
TAIVT +L++IID NYYPVETA SN+RHRPIGIGVQGLAD FILLGM F+SPEAQ+LNK
Sbjct: 408 TAIVTNDLDRIIDGNYYPVETAETSNMRHRPIGIGVQGLADAFILLGMPFDSPEAQKLNK 467
Query: 549 DIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMIS 608
DIFETIYYHALK SSE+AA+ YETY SP+SKGILQPDMWNV PS+RWDW LR+MIS
Sbjct: 468 DIFETIYYHALKASSELAARNDAYETYKGSPMSKGILQPDMWNVTPSNRWDWDFLREMIS 527
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
KNGVRNSLLV+ MPTASTSQILGNNE FEPYTSNIYS R LSGE ++VNKHLLHDLTEMG
Sbjct: 528 KNGVRNSLLVSLMPTASTSQILGNNESFEPYTSNIYSHRGLSGESILVNKHLLHDLTEMG 587
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+W+PT+K KII ++GS++ +PEIP+++K IY+T WEIKQ T+VDMAVDRGCYIDQSQ+LN
Sbjct: 588 LWTPTLKEKIIDENGSIRNVPEIPDDMKAIYRTAWEIKQRTVVDMAVDRGCYIDQSQTLN 647
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAA 764
I++++P+++K+TSLHF TW++GLKTGM+YLRSRA
Sbjct: 648 INLEEPSYQKLTSLHFYTWTKGLKTGMHYLRSRATT 683
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 31/42 (73%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQK 42
MYVVKRDG E V DKIT RL KLS GLS+ HCDP L+ +K
Sbjct: 5 MYVVKRDGWLETVDLDKITLRLNKLSNGLSSYHCDPSLLLRK 46
>gi|307180389|gb|EFN68415.1| Ribonucleoside-diphosphate reductase large subunit [Camponotus
floridanus]
Length = 889
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/777 (60%), Positives = 591/777 (76%), Gaps = 20/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+GR+E VHFDKIT+R+ K Y L + DP V+ +V G+Y GVTT LD LA
Sbjct: 32 MHVIKRNGRKEDVHFDKITSRIAKQCYNLDMNYVDPSAVAIQVIRGLYSGVTTVILDNLA 91
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA M TNHPDYA LAARI VSNLHK TKK+FS+ + D+Y+ + + P+I +
Sbjct: 92 AETAATMATNHPDYAILAARIDVSNLHKETKKNFSKVMHDLYHARDSVTNQHTPIINERY 151
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y II NA LDS IIYDRDF Y+Y GFKTLERSYLLK+ GK+VERPQHMLMRV++GIH+
Sbjct: 152 YNIIKNNAEKLDSAIIYDRDFSYNYIGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHE 211
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID AI+TY+ +S+R+FTHASPTLFNA T Q+SSCFL+ + +DSI+GI+ TLK+CA+
Sbjct: 212 TDIDKAIETYNYLSERYFTHASPTLFNACTNNQQMSSCFLLTLDNDSIKGIFGTLKKCAL 271
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRA + T+NG+V +L+++ND A YVDQGG KR GAFA+Y
Sbjct: 272 ISKYAGGIGLNVHCIRAKST--EDNTDTTNGLVSVLKLYNDMAIYVDQGGNKRPGAFAIY 329
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+FL L++N G RARDLFY LW+PDLFMERV N WSL CP+E+ GLA
Sbjct: 330 LEPWHADIFDFLELRRNIGDGNMRARDLFYGLWIPDLFMERVYNNENWSLMCPHESPGLA 389
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EF++LY YE+EG+ KK V+A+ +W IL SQ+ETGTPYML+KD CNRKSN Q++
Sbjct: 390 DVWGDEFKELYIRYEKEGRYKKQVEARAVWVAILRSQVETGTPYMLYKDHCNRKSNHQHI 449
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTE+I+Y+ P E AVCNLASIA+ FV + N+ F
Sbjct: 450 GTIKCSNLCTEVIQYSGPGEVAVCNLASIAVNMFV------------------NTNNKTF 491
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL + +VT NL+K+IDVN+YP+ + SN +HRPIGIG+QGLAD F+L+ FES
Sbjct: 492 DFDKLKTIAKVVTRNLDKVIDVNFYPIVETKTSNQKHRPIGIGIQGLADAFLLMRYPFES 551
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFET+YY AL+ S ++AA++G YETY SPVSKGILQ DMWNV P++ WDW
Sbjct: 552 KEAKELNIKIFETLYYGALEASCKLAAEKGTYETYEGSPVSKGILQYDMWNVKPTNLWDW 611
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEFV+VN HL
Sbjct: 612 DKLKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYVRRVLSGEFVIVNPHL 671
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLT G+W ++N+I+ GSVQ I IP++LK++YKTVWEI Q +++MA DRG +
Sbjct: 672 LRDLTARGLWDEDMQNEILASFGSVQNIDRIPDDLKVLYKTVWEIPQKVILEMAADRGAF 731
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLN+H+ P +K+TS+HF W GLKTGMYYLR++ AA+ I+FTVD S +
Sbjct: 732 IDQSQSLNVHIGDPTTEKLTSMHFFGWRSGLKTGMYYLRTKPAANPIQFTVDKSKLR 788
>gi|146091813|ref|XP_001470128.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania infantum JPCM5]
gi|134084922|emb|CAM69320.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania infantum JPCM5]
Length = 799
Score = 976 bits (2523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/816 (57%), Positives = 607/816 (74%), Gaps = 31/816 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
++KR+G + KI R +++ GL +H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDACKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY + R+ ++LHK T +S ET + +++H ++ APLIADD++E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNESLLETFRLLHDHVTVQTNRPAPLIADDVWE 127
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVSIG 177
++ ++ L S I Y RD ++++FG+KTLERSYLL+++ ++VERPQ M MRV++G
Sbjct: 128 VMQQHHKELQSMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH D+ + +TY +MS+ +FTHA+PTLFNAGTP+PQ+SSCFLV K+DSI+GIY+TLKE
Sbjct: 188 IHGADLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAVISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWHAD+F FL LK+N GK++ RARDLFYALW+PDLFM RV++ G+W+L PN
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GL+DC+G EFE+LY YE EG+ K +QAQ +WF IL SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTSP ETAVCNLASIALPRFV DV +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPQETAVCNLASIALPRFV---DV---------------EK 469
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
R F+ + L VT +T NLN++ID NYYPVETARRSN+R+RPIG+GVQGLAD FIL+ +
Sbjct: 470 REFNHQLLYTVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIP-S 595
F S EAQ++N +IFETIY+ A+++S E+A ++GPYET+ SP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEDGPYETFTGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RWDW L++ + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGMRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VNK+L+ DL G+W+ +++N+II +GS+ I +P++L+ +Y+TVWEI Q L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILTINGMPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ + P ++TS+ F W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYCWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 FKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
KE E+ + ++ + EEC+ CGS
Sbjct: 770 MKEIQER------ENSQQTMSSHRASQPEECLNCGS 799
>gi|398018021|ref|XP_003862197.1| ribonucleoside-diphosphate reductase large chain, putative
[Leishmania donovani]
gi|322500426|emb|CBZ35503.1| ribonucleoside-diphosphate reductase large chain, putative
[Leishmania donovani]
Length = 799
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/816 (57%), Positives = 607/816 (74%), Gaps = 31/816 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
++KR+G + KI R +++ GL +H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDACKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY + R+ ++LHK T +S ET + +++H ++ APLIADD++E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNESLLETFRLLHDHVTVQTNRPAPLIADDVWE 127
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVSIG 177
++ ++ L S I Y RD ++++FG+KTLERSYLL+++ ++VERPQ M MRV++G
Sbjct: 128 VMQQHHKELQSMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH D+ + +TY +MS+ +FTHA+PTLFNAGTP+PQ+SSCFLV K+DSI+GIY+TLKE
Sbjct: 188 IHGADLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAVISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWHAD+F FL LK+N GK++ RARDLFYALW+PDLFM RV++ G+W+L PN
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GL+DC+G EFE+LY YE EG+ K +QAQ +WF IL SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFVLYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTSP ETAVCNLASIALPRFV DV +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPQETAVCNLASIALPRFV---DV---------------EK 469
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
R F+ + L VT +T NLN++ID NYYPVETARRSN+R+RPIG+GVQGLAD FIL+ +
Sbjct: 470 REFNHQLLYTVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIP-S 595
F S EAQ++N +IFETIY+ A+++S E+A ++GPYET+ SP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEDGPYETFTGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RWDW L++ + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGMRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VNK+L+ DL G+W+ +++N+II +GS+ I +P++L+ +Y+TVWEI Q L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILTINGMPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ + P ++TS+ F W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYCWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 FKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
KE E+ + ++ + EEC+ CGS
Sbjct: 770 MKEIQER------ENSQQTMSSHRASQPEECLNCGS 799
>gi|157871642|ref|XP_001684370.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania major strain Friedlin]
gi|68127439|emb|CAJ05210.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania major strain Friedlin]
Length = 799
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/816 (56%), Positives = 604/816 (74%), Gaps = 31/816 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
++KR+G + KI R +++ GL +H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDASKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY + R+ ++LHK T +S ET + +++H ++ APLIADD++E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNESLLETFRLLHSHVTVQTNRPAPLIADDVWE 127
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVSIG 177
++ ++ A L I Y RD ++++FG+KTLERSYLL+++ ++VERPQ M MRV++G
Sbjct: 128 VMKQHHAELQGMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH D+ + +TY +MS+ +FTHA+PTLFNAGTP+PQ+SSCFLV K+DSI+GIY+TLKE
Sbjct: 188 IHGADLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAVISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWHAD+F FL LK+N GK++ RARDLFYALW+PDLFM RV++ G+W+L PN
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GL+DC+G EFE+LY YE EG+ K +QAQ +WF IL SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTS ETAVCNLASIALPRFV +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSSQETAVCNLASIALPRFVE------------------VEK 469
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
R + + L VT +T NLN++ID NYYPVETARRSN+R+RPIG+GVQGLAD FIL+ +
Sbjct: 470 RELNHQLLYTVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIP-S 595
F S EAQ++N +IFETIY+ A+++S E+A +EGPYET+ SP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEEGPYETFAGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RWDW L++ + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGMRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VNK+L+ DL G+W+ +++N+II +GS+ I +P++L+ +Y+TVWEI Q L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILAINGMPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ + P ++TS+ F +W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYSWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 FKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
KE E+ + ++ + EEC+ CGS
Sbjct: 770 MKEIQER------ETSQQTMSSHRASQPEECLNCGS 799
>gi|71422050|ref|XP_812008.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma cruzi
strain CL Brener]
gi|70876737|gb|EAN90157.1| ribonucleoside-diphosphate reductase large chain, putative
[Trypanosoma cruzi]
Length = 796
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/817 (57%), Positives = 608/817 (74%), Gaps = 32/817 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V KRDG ++ +K+ AR++++S+GL + D ++++ V GV+ ++T +LD+L
Sbjct: 6 LTVRKRDGSLQSFDANKLFARIERVSHGLDPNYVDVKILTEIVVGGVHDEISTVELDKLI 65
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA T HPDY + R+ V+ LHK T S ET ++ H +G APL++D++
Sbjct: 66 AETAAYSVTKHPDYGLMGGRLCVTALHKTTSASVLETFSILHKHKIHDTGRAAPLLSDEV 125
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV-----QGKVVERPQHMLMRVS 175
+E++ ++ L + YDRD +++FG+KTLERSYLL+V + ++ ERPQ M +RV+
Sbjct: 126 WEVVQRHHEQLQRMVNYDRDMRFEFFGYKTLERSYLLRVDRGRGEREIAERPQQMFLRVA 185
Query: 176 IGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
+GIH +D++ +TY MS FTHA+PTLFNAGTP PQ+SSCFLV M++DSIEGIY+TL
Sbjct: 186 LGIHGEDMERVKETYDHMSLGDFTHATPTLFNAGTPFPQMSSCFLVAMREDSIEGIYDTL 245
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+CAVISKSAGGIGV VHNIR +GSYI GTNG SNG+VPMLRV+N+TARYVDQGGGKRKG
Sbjct: 246 KQCAVISKSAGGIGVHVHNIRCSGSYIAGTNGQSNGLVPMLRVWNNTARYVDQGGGKRKG 305
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
AFA+YLEPWH DIF FL LKKN GKE+HRARDLFYALW+PDLFMERV++ G+W+L P+
Sbjct: 306 AFAIYLEPWHGDIFNFLLLKKNTGKEDHRARDLFYALWIPDLFMERVKSGGKWTLMDPHT 365
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
A GL+DC+G +F+KLY YERE + K VQAQ+LWF IL SQ+ETG P+ML+KD CNRKS
Sbjct: 366 APGLSDCYGDDFKKLYEGYERENRGVKTVQAQSLWFAILESQMETGVPFMLYKDACNRKS 425
Query: 416 NQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGS 475
NQ+N+G IK SNLCTEIIEYTS E AVCNLASIALPRFV +
Sbjct: 426 NQKNVGVIKCSNLCTEIIEYTSRDEVAVCNLASIALPRFVDK------------------ 467
Query: 476 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
+ R +D ++L EVT IVT+NLN++ID N+YPV +RRSN +RPIGIGVQG+ADTFIL+
Sbjct: 468 ERRIYDHQRLYEVTKIVTKNLNRVIDRNHYPVPESRRSNELNRPIGIGVQGMADTFILMR 527
Query: 536 MAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP- 594
+ F EA+ LN+DIFETIYY A++ S E+A EGPY + SP S+G LQ D+W P
Sbjct: 528 LPFTCQEARTLNEDIFETIYYGAVEASVELAEVEGPYARFAGSPASQGQLQFDLWEQKPR 587
Query: 595 SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
S RWDW L+ + K+G+RNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 588 SGRWDWDALKKRMMKSGMRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 647
Query: 655 VVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMA 714
VVNK+L+ DL + G+W+ ++N+II +GSVQ I IP +LK +Y+ VWEI+Q L++MA
Sbjct: 648 VVNKYLVMDLIKRGLWNEEMRNQIIAYNGSVQNIRGIPNDLKELYRVVWEIRQKDLIEMA 707
Query: 715 VDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
VDRG +IDQSQSLN+ ++ P ++TS+HF W RGLKTGMYYLRS+ AADAIKFTVD +
Sbjct: 708 VDRGKFIDQSQSLNLFLENPTSSQLTSMHFFAWERGLKTGMYYLRSKPAADAIKFTVDPN 767
Query: 775 VFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
K LV +D+ K QV + + E+C+ CGS
Sbjct: 768 TLK------GLVKEDDRK--QVSSATPSNEDCLNCGS 796
>gi|401424884|ref|XP_003876927.1| ribonucleoside-diphosphate reductase large chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493171|emb|CBZ28456.1| ribonucleoside-diphosphate reductase large chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 799
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/816 (57%), Positives = 602/816 (73%), Gaps = 31/816 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
++KR+G + KI R +++ GL +H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDASKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY + R+ ++LHK T S ET + +++H ++ APLIA D++E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNASLLETFRLLHDHVTVQTNRPAPLIAGDVWE 127
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVSIG 177
++ ++ L I Y RD +++FG+KTLERSYLL+++ ++VERPQ M MRV++G
Sbjct: 128 VMQQHHKELQGMIDYSRDLSFEFFGYKTLERSYLLRIESGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH D+ + +TY +MS+ +FTHA+PTLFNAGTP+PQ+SSCFLV K+DSI+GIY+TLKE
Sbjct: 188 IHGTDLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAVISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWHADIF FL LK+N GK++ RARDLFYALW+PDLFM RV++ G+W+L PN
Sbjct: 308 AVYLEPWHADIFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GL+DC+G EFE+LY YE EG+ K +QAQ +WF IL SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTSP ETAVCNLASIALPRFV DV +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPQETAVCNLASIALPRFV---DV---------------EK 469
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
R F+ + L VT +T NLN++ID NYYPVETAR SN+R+RPIG+GVQGLAD FIL+ +
Sbjct: 470 REFNHQLLYTVTKQITRNLNRVIDRNYYPVETARHSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIP-S 595
F S EAQ++N +IFETIY+ A+++S E+A +EGPYET+ SP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEEGPYETFKGSPASEGILQFDMWKNPRPNS 589
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RWDW L++ + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGLRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VNK+L+ DL G+W+ +++N+II +GS+ I IP++L+ +Y+TVWEI Q L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILTINGIPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ + P ++TS+ F W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYCWEAGLKTGLYYLRTKAAADAIKFTVDAKR 769
Query: 776 FKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
KE E+ + ++ + EEC+ CGS
Sbjct: 770 MKEIQER------ENSQQTMSSRRASQPEECLNCGS 799
>gi|407853283|gb|EKG06338.1| hypothetical protein TCSYLVIO_002561 [Trypanosoma cruzi]
Length = 796
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/817 (57%), Positives = 608/817 (74%), Gaps = 32/817 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V KRDG ++ +K+ AR++++S+GL + D ++++ V GV+ ++T +LD+L
Sbjct: 6 LTVRKRDGSLQSFDANKLFARIERVSHGLDPNYVDVKILTEIVVGGVHDEISTVELDKLI 65
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA T HPDY + R+ V+ LHK T S ET ++ H +G APL++D++
Sbjct: 66 AETAAYSVTKHPDYGLMGGRLCVTALHKTTSASVLETFSILHKHKIHDTGRAAPLLSDEV 125
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV-----QGKVVERPQHMLMRVS 175
+EI+ ++ L + YDRD +++FG+KTLERSYLL+V + ++ ERPQ M +RV+
Sbjct: 126 WEIVQRHHEQLQRMVNYDRDMRFEFFGYKTLERSYLLRVDRGRGEREIAERPQQMFLRVA 185
Query: 176 IGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
+GIH +D++ +TY MS +FTHA+PTLFNAGTP PQ+SSCFLV M++DSIEGIY+TL
Sbjct: 186 LGIHGEDMERVKETYDHMSLGYFTHATPTLFNAGTPFPQMSSCFLVAMREDSIEGIYDTL 245
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+CAVISKSAGGIGV VHNIR +GSYI GTNG SNG+VPMLRV+N+TARYVDQGGGKRKG
Sbjct: 246 KQCAVISKSAGGIGVHVHNIRCSGSYIAGTNGQSNGLVPMLRVWNNTARYVDQGGGKRKG 305
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
AFA+YLEPWH DIF FL LKKN GKE+HRARDLFYALW+PDLFMERV++ G+W+L P+
Sbjct: 306 AFAIYLEPWHGDIFNFLLLKKNTGKEDHRARDLFYALWIPDLFMERVKSGGKWTLMDPHT 365
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
A GL+DC+G +F+KLY YERE + K VQAQ+LWF IL Q+ETG P+ML+KD CNRKS
Sbjct: 366 APGLSDCYGDDFKKLYEGYERENRGVKTVQAQSLWFAILELQMETGVPFMLYKDACNRKS 425
Query: 416 NQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGS 475
NQ+N+G IK SNLCTEIIEYTS E AVCNLASIALPRFV +
Sbjct: 426 NQKNVGVIKCSNLCTEIIEYTSRDEVAVCNLASIALPRFVDK------------------ 467
Query: 476 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
+ + +D ++L EVT IVT+NLN++ID N+YPV +RRSN +RPIGIGVQG+ADTFIL+
Sbjct: 468 ERKIYDHQRLYEVTKIVTKNLNRVIDRNHYPVPESRRSNELNRPIGIGVQGMADTFILMR 527
Query: 536 MAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP- 594
+ F EA+ LN+DIFETIYY A++ S E+A EGPY + SP S+G LQ D+W P
Sbjct: 528 LPFTCQEARTLNEDIFETIYYGAVEASVELAEVEGPYARFAGSPASQGQLQFDLWEQKPR 587
Query: 595 SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
S RWDW L+ + K+G+RNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 588 SGRWDWDALKKRMMKSGMRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 647
Query: 655 VVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMA 714
VVNK+L+ DL + G+W+ ++N+II +GSVQ I IP +LK +Y+ VWEI+Q L++MA
Sbjct: 648 VVNKYLVMDLIKRGLWNEEMRNQIIAYNGSVQNIRGIPNDLKELYRVVWEIRQKDLIEMA 707
Query: 715 VDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
VDRG +IDQSQSLN+ ++ P ++TS+HF W RGLKTGMYYLRS+ AADAIKFTVD +
Sbjct: 708 VDRGKFIDQSQSLNLFLENPTSSQLTSMHFFAWERGLKTGMYYLRSKPAADAIKFTVDPN 767
Query: 775 VFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
K LV +D+ K QV + + E+C+ CGS
Sbjct: 768 TLK------GLVKEDDRK--QVSSATPSNEDCLNCGS 796
>gi|340059001|emb|CCC53372.1| putative ribonucleoside-diphosphate reductase large chain
[Trypanosoma vivax Y486]
Length = 799
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/827 (57%), Positives = 595/827 (71%), Gaps = 44/827 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR+G E ++ RL+ + G+ + ++ + V AG Y + T+ LD L
Sbjct: 1 MNVIKRNGSIEPFSRMELMERLEAIGEGIDRNYVSFEMIVETVAAGAYDNIQTTVLDTLL 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA T HP Y L RI+V+ LH+ T E MYNH + S APLI+D+
Sbjct: 61 AETAAYAVTKHPHYGLLGGRISVTALHRITHSDVLEAFGVMYNHLSHTSREHAPLISDET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV-----QGKVVERPQHMLMRVS 175
+ II K + L+ I Y RD +Y+YFG+KTLERSYLL+ +V+ERPQ M++RV+
Sbjct: 121 WGIIKKRSKELNEIIDYKRDLNYEYFGYKTLERSYLLRADRGIGNTEVIERPQQMILRVA 180
Query: 176 IGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
IGIH DDI+ +TY +MS +FTHASPTLFNAGTPRPQ+SSCFL+ M+DDSIEGIY+TL
Sbjct: 181 IGIHGDDIEHIKETYDLMSLGFFTHASPTLFNAGTPRPQMSSCFLLAMRDDSIEGIYDTL 240
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+CA+ISK+AGGIG+ VHNIR+TGSYI+GTNGTSNG+VPMLRV+N+TARYVDQGGGKRKG
Sbjct: 241 KQCAIISKAAGGIGIHVHNIRSTGSYIKGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKG 300
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
AFA+YLEPWHADIF+F++LK+N GKEEHRARDLFY LW+PDLFM+RV+ +W+L P
Sbjct: 301 AFAIYLEPWHADIFKFISLKRNTGKEEHRARDLFYGLWIPDLFMKRVEEGKKWTLMDPKT 360
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
A GL+DC+G EFE+ Y YE+E + V AQ+LW IL SQIETG P+ML+KD CNRKS
Sbjct: 361 APGLSDCYGEEFERKYEKYEKENRGTDSVAAQDLWSAILQSQIETGGPFMLYKDACNRKS 420
Query: 416 NQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGS 475
NQ+NLGTIK SNLCTEII++TS E AVCNLASIALPRFV
Sbjct: 421 NQKNLGTIKCSNLCTEIIQFTSKDEVAVCNLASIALPRFV-------------------- 460
Query: 476 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
KN FD +L VT +VT NLNK+ID N YPV A SN+RHRPIGIGVQGLADTF L
Sbjct: 461 KNGTFDHHELHRVTKVVTRNLNKVIDRNTYPVREAEASNMRHRPIGIGVQGLADTFACLR 520
Query: 536 MAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN---- 591
F SP+A++LNK+IFETIYY A++ S E+A G YE++ SP S+G+LQPD+W
Sbjct: 521 YPFASPDAKKLNKEIFETIYYSAVEASVELAETHGSYESFAGSPASEGLLQPDLWEKELV 580
Query: 592 -------VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+ S RWDW +LR+ + K+G+RNSLLVAPMPTASTSQILGNNEC EP+TSNIY
Sbjct: 581 QKGRKPVLTCSGRWDWTMLRERVMKSGMRNSLLVAPMPTASTSQILGNNECIEPFTSNIY 640
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWE 704
RRVLSGEF +VNK+L+ DL + G+W+ ++N+II +GS+Q IP IP++LK +YK VWE
Sbjct: 641 VRRVLSGEFPIVNKYLVIDLIKDGMWNDEMRNQIIAHNGSIQNIPGIPDKLKELYKVVWE 700
Query: 705 IKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAA 764
IKQ L+DMAVDRG YIDQSQSLNI ++ P ++TS+HF W GLKTGMYYLRS+ AA
Sbjct: 701 IKQRDLIDMAVDRGHYIDQSQSLNIFLESPTLPQLTSMHFYAWKSGLKTGMYYLRSKPAA 760
Query: 765 DAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
DAIKFT+D P+K + + D AQ + T EC+ CG+
Sbjct: 761 DAIKFTID-------PKKLKEMQADSALQAQRHYA-TTEGECLNCGA 799
>gi|407420213|gb|EKF38496.1| origin recognition complex subunit 1, putative,cell division cycle
6, putative [Trypanosoma cruzi marinkellei]
Length = 796
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/817 (57%), Positives = 606/817 (74%), Gaps = 32/817 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V KRDG ++ K+ AR++++S+GL + D +++ V GV+ ++T +LD+L
Sbjct: 6 LTVRKRDGSLQSFDASKVFARIERVSHGLDPNYVDVKTLTEIVVGGVHDEISTIELDKLI 65
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA T HPDY + R++V+ LHK T S ET ++ H +G +APL++D++
Sbjct: 66 AETAAYSVTKHPDYGLMGGRLSVTALHKTTSASVLETFSILHKHKIHDTGREAPLLSDEV 125
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV-----QGKVVERPQHMLMRVS 175
+E++ ++ L + Y+RD +++FG+KTLERSYLL+V + ++ ERPQ M +RV+
Sbjct: 126 WEVVQRHHEQLQRMVDYNRDMRFEFFGYKTLERSYLLRVDKGRGEREIAERPQLMFLRVA 185
Query: 176 IGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
+GIH +D++ +TY MS FTHA+PTLFNAGTP PQ+SSCFLV M++DSIEGIY+TL
Sbjct: 186 LGIHGEDMERVKETYDHMSLGDFTHATPTLFNAGTPFPQMSSCFLVAMREDSIEGIYDTL 245
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+CAVISKSAGGIGV VHNIR +GSYI GTNG SNG+VPMLRV+N+TARYVDQGGGKRKG
Sbjct: 246 KQCAVISKSAGGIGVHVHNIRCSGSYIAGTNGQSNGLVPMLRVWNNTARYVDQGGGKRKG 305
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
AFA+YLEPWH DIF FL LKKN GKE+ RARDLFYALW+PDLFMERV++ G+W+L P+
Sbjct: 306 AFAIYLEPWHGDIFNFLLLKKNTGKEDQRARDLFYALWIPDLFMERVKSGGKWTLMDPHT 365
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
A GL+DC+G +F+KLY YERE + K VQAQ+LWF IL SQ+ETG P+ML+KD CNRKS
Sbjct: 366 APGLSDCYGDDFKKLYEGYERENRGVKTVQAQSLWFAILESQMETGVPFMLYKDACNRKS 425
Query: 416 NQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGS 475
NQ+N+G IK SNLCTEIIEYTS E AVCNLASIALPRFV +
Sbjct: 426 NQKNIGVIKCSNLCTEIIEYTSKDEVAVCNLASIALPRFVDK------------------ 467
Query: 476 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
+ R +D ++L EVT IVT+NLN++ID N+YPV +RRSN +RPIGIGVQG+ADTFIL+
Sbjct: 468 EKRMYDHQRLYEVTKIVTKNLNRVIDRNHYPVPESRRSNELNRPIGIGVQGMADTFILMR 527
Query: 536 MAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP- 594
+ F EA+ LN+DIFETIYY A++ S E+A EGPY + SP S+G LQ D+W P
Sbjct: 528 LPFTCQEARTLNEDIFETIYYGAVEASVELAEVEGPYARFAGSPASQGQLQFDLWEQKPR 587
Query: 595 SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
S RWDW L+ + K+G+RNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 588 SGRWDWDALKRRVMKSGMRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 647
Query: 655 VVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMA 714
VVNK+L+ DL + G+W+ ++N+II +GSVQ I IP +LK +Y+ VWEI+Q L++MA
Sbjct: 648 VVNKYLVMDLIKRGLWNEEMRNQIIAYNGSVQNIKGIPNDLKELYRVVWEIRQKDLIEMA 707
Query: 715 VDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
VDRG +IDQSQSLN+ ++ P ++TS+HF W RGLKTGMYYLRS+ AADAIKFTVD +
Sbjct: 708 VDRGKFIDQSQSLNLFLENPTSSQLTSMHFFAWERGLKTGMYYLRSKPAADAIKFTVDPN 767
Query: 775 VFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
K LV +D+ K Q + + E+C+ CGS
Sbjct: 768 TLK------GLVKEDDRK--QFSSATPSNEDCLNCGS 796
>gi|328722843|ref|XP_003247688.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 802
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/816 (56%), Positives = 600/816 (73%), Gaps = 30/816 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V KRDGR E V DKIT R+++L GL+ + DP ++ V + G++T Q+D LA
Sbjct: 12 LFVKKRDGRMEEVMMDKITMRIEQLCEGLNMDFIDPPEITLFVIGDICPGISTVQIDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPD+A LAARIA+SNL+K TK +FS+ I D+YN NER+ + +I+D
Sbjct: 72 AETAAYLTTKHPDFAVLAARIAISNLYKETKNNFSDVIYDLYNMSNERNQRRMKIISDFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++MK+A L++ I +DRD+ Y YFGFKTLE+SYLLK+ GKVVERPQH+LMRVSIGIH
Sbjct: 132 YGVVMKHADRLNNAIKHDRDYTYSYFGFKTLEKSYLLKINGKVVERPQHLLMRVSIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY +MS ++FTHASPT+FNA TPRPQLSSCFLV K DS+E +T+K CA
Sbjct: 192 EDIDAAIETYDLMSSKYFTHASPTMFNAATPRPQLSSCFLVANKSDSLEDFGKTVKTCAK 251
Query: 241 ISKSAGGIGVSVHNIRATGS-YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
IS+S+GGIG+ +HNI A G+ + + S+G+V L+V ND A+YVDQGG KR GA AV
Sbjct: 252 ISQSSGGIGIHLHNISAAGTTWTKYPRHESHGLVEPLKVLNDLAQYVDQGG-KRPGAVAV 310
Query: 300 YLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGL 359
Y+EPWHAD++ + L+KN G +E + RDLF ALW+PD FM RV+ N WSL CP + GL
Sbjct: 311 YIEPWHADVYTYTELRKNTGNKEEKTRDLFLALWIPDEFMRRVEANQSWSLMCPRKCPGL 370
Query: 360 ADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
+D WG +F KLY YE E + + V A+ LWF I+TSQIETG PY+L+KD CN KSNQ+N
Sbjct: 371 SDVWGDDFVKLYKKYEDEKRYNRQVSARELWFRIITSQIETGMPYVLYKDACNSKSNQKN 430
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LGTIK SNLCTEII+YTS E AVCNLASIA+ FV+ N
Sbjct: 431 LGTIKCSNLCTEIIQYTSSEEVAVCNLASIAVNMFVK-------------------PNGE 471
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
+DFEKL ++T IVT+NLN++IDVN+YPV A SN RHRP+GIGVQGLAD F+L+ F
Sbjct: 472 YDFEKLLKITKIVTKNLNRVIDVNFYPVIEAETSNKRHRPVGIGVQGLADLFLLMRFPFG 531
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
SPE+++LN IFET+YY AL+ S E+A K G Y +Y SP+S+GILQ DMWNV P+D WD
Sbjct: 532 SPESRKLNSQIFETLYYGALEASCELAEKYGTYSSYQGSPISQGILQYDMWNVKPTDLWD 591
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W +L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYT+N+Y RR LSGEF VVN+H
Sbjct: 592 WDILKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTTNLYYRRTLSGEFSVVNRH 651
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL ++ +W+ ++N++IY GSVQKI IP+ +K +YKT WE+ Q ++DMA DR
Sbjct: 652 LLNDLIKLNLWNEDMRNELIYYKGSVQKIKSIPDNIKELYKTNWELSQKIILDMAADRAA 711
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE- 778
+IDQSQSLNIH++QP K++S+HF W +GLKTGMYYLR+R AAD I+FTV+ S
Sbjct: 712 FIDQSQSLNIHIEQPTIGKISSVHFYGWKKGLKTGMYYLRTRPAADPIQFTVNKSTLSSN 771
Query: 779 ---KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ EK +D M ++VCSL N++ C CG+
Sbjct: 772 IAIQTEK-----NDALSMQELVCSLENKDACTMCGA 802
>gi|193669060|ref|XP_001942710.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Acyrthosiphon pisum]
gi|328715730|ref|XP_003245707.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 2 [Acyrthosiphon pisum]
Length = 802
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/816 (56%), Positives = 600/816 (73%), Gaps = 30/816 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V KRDGR E V DKIT R+++L GL+ + DP ++ V + G++T Q+D LA
Sbjct: 12 LFVKKRDGRMEEVMMDKITMRIEQLCEGLNMDFIDPPEITLFVIGDICPGISTVQIDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPD+A LAARIA+SNL+K TK +FS+ I D+YN NER+ + +I+D
Sbjct: 72 AETAAYLTTKHPDFAVLAARIAISNLYKETKNNFSDVIYDLYNMSNERNQRRMKIISDFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y ++MK+A L++ I +DRD+ Y YFGFKTLE+SYLLK+ GKVVERPQH+LMRVSIGIH
Sbjct: 132 YGVVMKHADRLNNAIKHDRDYTYSYFGFKTLEKSYLLKINGKVVERPQHLLMRVSIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY +MS ++FTHASPT+FNA TPRPQLSSCFLV K DS+E +T+K CA
Sbjct: 192 EDIDAAIETYDLMSSKYFTHASPTMFNAATPRPQLSSCFLVANKSDSLEDFGKTVKTCAK 251
Query: 241 ISKSAGGIGVSVHNIRATGS-YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
IS+S+GGIG+ +HNI A G+ + + S+G+V L+V ND A+YVDQGG KR GA AV
Sbjct: 252 ISQSSGGIGIHLHNISAAGTTWTKYPRHESHGLVEPLKVLNDLAQYVDQGG-KRPGAVAV 310
Query: 300 YLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGL 359
Y+EPWHAD++ + L+KN G +E + RDLF ALW+PD FM RV+ + WSL CP + GL
Sbjct: 311 YIEPWHADVYTYTELRKNTGNKEEKTRDLFLALWIPDEFMRRVEADQSWSLMCPRKCPGL 370
Query: 360 ADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
+D WG +F KLY YE E + + V A+ LWF I+TSQIETG PY+L+KD CN KSNQ+N
Sbjct: 371 SDVWGDDFVKLYKKYEDEKRYNRQVSARELWFRIITSQIETGMPYVLYKDACNSKSNQKN 430
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LGTIK SNLCTEII+YTS E AVCNLASIA+ FV+ N
Sbjct: 431 LGTIKCSNLCTEIIQYTSSEEVAVCNLASIAVNMFVK-------------------PNGE 471
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
+DFEKL ++T IVT+NLN++IDVN+YPV A SN RHRP+GIGVQGLAD F+L+ F
Sbjct: 472 YDFEKLLKITKIVTKNLNRVIDVNFYPVIEAETSNKRHRPVGIGVQGLADLFLLMRFPFG 531
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
SPE+++LN IFET+YY AL+ S E+A K G Y +Y SP+S+GILQ DMWNV P+D WD
Sbjct: 532 SPESRKLNSQIFETLYYGALEASCELAEKYGTYSSYQGSPISQGILQYDMWNVKPTDLWD 591
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W +L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYT+N+Y RR LSGEF VVN+H
Sbjct: 592 WDILKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTTNLYYRRTLSGEFSVVNRH 651
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL ++ +W+ ++N++IY GSVQKI IP+ +K +YKT WE+ Q ++DMA DR
Sbjct: 652 LLNDLIKLNLWNEDMRNELIYYKGSVQKIKSIPDNIKELYKTNWELSQKIILDMAADRAA 711
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE- 778
+IDQSQSLNIH++QP K++S+HF W +GLKTGMYYLR+R AAD I+FTV+ S
Sbjct: 712 FIDQSQSLNIHIEQPTIGKISSVHFYGWKKGLKTGMYYLRTRPAADPIQFTVNKSTLSSN 771
Query: 779 ---KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ EK +D M ++VCSL N++ C CG+
Sbjct: 772 IAIQTEK-----NDALSMQELVCSLENKDACTMCGA 802
>gi|193608391|ref|XP_001944671.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 802
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/816 (57%), Positives = 598/816 (73%), Gaps = 30/816 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V KRDGR E V DKIT R+++L GL+ + DP ++ V + G+TT Q+D LA
Sbjct: 12 LFVKKRDGRLEEVLMDKITLRIEQLCDGLNMDFIDPPEITLYVIGDLCPGITTVQIDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPD+A LAARIA+SNL+K TK++FS+ I D+YN NER+ + P+I+D
Sbjct: 72 AETAAYLTTKHPDFAVLAARIAISNLYKETKENFSDVIYDLYNMSNERNQSRMPIISDFH 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y I+MK+A L++ I +DRD+ Y YFGFKTLE+SYLLK+ GKVVERPQH+LMRVSIGIH
Sbjct: 132 YGIVMKHADRLNNAIKHDRDYTYSYFGFKTLEKSYLLKIDGKVVERPQHLLMRVSIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY +MS ++FTHASPT+FNA TPRPQLSSCFLV K D +E +T+K CA
Sbjct: 192 EDIDAAIETYDLMSLKYFTHASPTMFNASTPRPQLSSCFLVANKSDELEDFGKTVKTCAK 251
Query: 241 ISKSAGGIGVSVHNIRATGS-YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
IS+SAGGIGV +HN+ A G+ + + S+G+V L+V ND A+Y+DQGG +R GA AV
Sbjct: 252 ISQSAGGIGVHLHNVGAAGTKWTKYPKCESHGLVEPLKVLNDLAQYIDQGG-RRPGAVAV 310
Query: 300 YLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGL 359
Y+EPWHADI+ + L+KN G +E + RDLF ALW+PD FM RV+ N WSL CP + GL
Sbjct: 311 YIEPWHADIYTYTELRKNTGNKEEKTRDLFLALWIPDEFMRRVEANQSWSLMCPRKCPGL 370
Query: 360 ADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
+D WG +F KLY YE E K V A+ LWF I+TSQIETG PYML+KD CN KSNQ+N
Sbjct: 371 SDVWGDDFVKLYKKYEDEKLYNKQVPARELWFRIITSQIETGMPYMLYKDACNAKSNQKN 430
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LGTIK SNLCTE+I+YTS E AVCNLASIA+ FV+ N
Sbjct: 431 LGTIKCSNLCTEVIQYTSEEEVAVCNLASIAVNMFVK-------------------PNGE 471
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
+DFEKL ++T IVT NLNK+IDVN+YPV A SN RHRPIGIG+QGLAD F L+ F
Sbjct: 472 YDFEKLLKITKIVTRNLNKVIDVNFYPVIEAETSNKRHRPIGIGIQGLADLFSLMRFPFG 531
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
SPE+++LN IFET+YY AL+ S E+A K G Y +Y SP+S+GILQ +MWNV PS W+
Sbjct: 532 SPESRKLNIQIFETLYYGALEASCELAEKYGTYSSYQGSPISQGILQYEMWNVKPSSLWN 591
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W +L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYT+N+Y RR LSGEF V+N+H
Sbjct: 592 WEILKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTTNLYYRRTLSGEFSVINRH 651
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL+DL ++ +W+ ++NK+I+ GSVQKI IP+ +K +YKT WE+ Q ++DMA DRG
Sbjct: 652 LLNDLIKLNLWNEDMRNKLIFFKGSVQKIKSIPDNIKELYKTNWELSQKIILDMAADRGA 711
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE- 778
YIDQSQSLNIH++QP K++S+HF W +GLKTGMYYLR+R AAD I+FTVD S
Sbjct: 712 YIDQSQSLNIHIEQPTISKISSVHFYGWKKGLKTGMYYLRTRPAADPIQFTVDKSTVSNN 771
Query: 779 ---KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ EK +D M Q+VCSL N++ C CG+
Sbjct: 772 VAIQTEK-----NDALNMEQLVCSLENKDACTMCGA 802
>gi|71755889|ref|XP_828859.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma
brucei]
gi|70834245|gb|EAN79747.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 838
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/800 (58%), Positives = 593/800 (74%), Gaps = 39/800 (4%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V KRDG E + +R+ L G+ + + D + + V GV +G++TS LDEL AE
Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY LA R+AV+ LHK T +S ++ + ++ H ++ + APLI++++++
Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATRRHAPLISEELWD 127
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV-QGK----VVERPQHMLMRVSIG 177
I K++A L I Y+RDFD++YFG+KTLERSYLL+V +G+ VVERPQ M +RV++G
Sbjct: 128 IANKHSAALQQIINYERDFDFEYFGYKTLERSYLLRVDKGRGVMEVVERPQQMFLRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH +D++ +TY MSQ +FTHA+PTLFNAGTP PQ+SSCFLV M++DSI+GIY+TLK+
Sbjct: 188 IHGEDLERVKETYDYMSQGFFTHATPTLFNAGTPFPQMSSCFLVAMREDSIDGIYDTLKQ 247
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG+ +HNIRA GSYI GTNGTSNG+VPMLRV+N+TARYVDQGGGKRKGAF
Sbjct: 248 CAIISKSAGGIGIHMHNIRAAGSYIAGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
A+YLEPWHADIF FL LKKN GKE+ RARDLFY LW+PDLFMERV+++G W+L PN A
Sbjct: 308 AIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMDPNTAP 367
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
L+DC+G EF LY YEREG+ + +QAQ LWF IL SQ+ETG P+ML+KD CN KSNQ
Sbjct: 368 FLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQ 427
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTS E AVCNLASIALPRFV K+
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFV--------------------KD 467
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
FD+ L EVT +VT NLN++ID N+YPV AR SNLRHRP+GIGVQGLADTF LL +
Sbjct: 468 GAFDYVALKEVTKVVTRNLNRVIDRNHYPVREARYSNLRHRPVGIGVQGLADTFALLSLP 527
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR 597
F PEA++LN+ IFETIY+ A++ S+E+A K+GPYET+ SP S+G LQ D+W+ R
Sbjct: 528 FAHPEAKKLNRQIFETIYFAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIR 587
Query: 598 -------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
WDW L++ + K G+RNSLLVAPMPTASTSQILGNNEC EP+TSNIY
Sbjct: 588 GMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLVAPMPTASTSQILGNNECIEPFTSNIY 647
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWE 704
RRVLSGEF VVNKHL+ +L + +W+ ++ KII +GSV I EIPE ++ +YK VWE
Sbjct: 648 VRRVLSGEFPVVNKHLVKELIRLQLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWE 707
Query: 705 IKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAA 764
I+Q L+DMA DRG YIDQSQSLN+ + P ++TS+HF +W +GLKTGMYYLRS+ AA
Sbjct: 708 IRQKDLIDMAADRGRYIDQSQSLNLFLGTPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAA 767
Query: 765 DAIKFTVDTSVFKEKPEKPE 784
DAIKFT+D KE P KP+
Sbjct: 768 DAIKFTLDPKAMKELP-KPD 786
>gi|261334781|emb|CBH17775.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma
brucei gambiense DAL972]
Length = 838
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/800 (58%), Positives = 592/800 (74%), Gaps = 39/800 (4%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V KRDG E + +R+ L G+ + + D + + V GV +G++TS LDEL AE
Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY LA R+AV+ LHK T +S ++ + ++ H ++ + APLI++++++
Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATKRHAPLISEELWD 127
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV-QGK----VVERPQHMLMRVSIG 177
I K++A L I Y+RDFD++YFG+KTLERSYLL+V +G+ VVERPQ M +RV++G
Sbjct: 128 IANKHSAALQQIINYERDFDFEYFGYKTLERSYLLRVDKGRGVMEVVERPQQMFLRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH +D++ +TY MSQ +FTHA+PTLFNAGTP PQ+SSCFLV M++DSI+GIY+TLK+
Sbjct: 188 IHGEDLERVKETYDYMSQGFFTHATPTLFNAGTPFPQMSSCFLVAMREDSIDGIYDTLKQ 247
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG+ +HNIRA GSYI GTNGTSNG+VPMLRV+N+TARYVDQGGGKRKGAF
Sbjct: 248 CAIISKSAGGIGIHMHNIRAAGSYIAGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
A+YLEPWHADIF FL LKKN GKE+ RARDLFY LW+PDLFMERV+++G W+L PN A
Sbjct: 308 AIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMDPNTAP 367
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
L+DC+G EF LY YEREG+ + +QAQ LWF IL SQ+ETG P+ML+KD CN KSNQ
Sbjct: 368 FLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQ 427
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTS E AVCNLASIALPRFV K+
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFV--------------------KD 467
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
FD+ L EVT +VT NLN++ID N+YPV AR SNLRHRP+GIGVQGLAD F LL +
Sbjct: 468 GAFDYVALKEVTKVVTRNLNRVIDRNHYPVCEARYSNLRHRPVGIGVQGLADAFALLSLP 527
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR 597
F PEA++LN+ IFETIY+ A++ S+E+A K+GPYET+ SP S+G LQ D+W+ R
Sbjct: 528 FAHPEAKKLNRQIFETIYFAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIR 587
Query: 598 -------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
WDW L++ + K G+RNSLL+APMPTASTSQILGNNEC EP+TSNIY
Sbjct: 588 GMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLIAPMPTASTSQILGNNECIEPFTSNIY 647
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWE 704
RRVLSGEF VVNKHL+ +L + +W+ ++ KII +GSV I EIPE ++ +YK VWE
Sbjct: 648 VRRVLSGEFPVVNKHLVKELIRLRLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWE 707
Query: 705 IKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAA 764
I+Q L+DMA DRG YIDQSQSLN+ + P ++TS+HF +W +GLKTGMYYLRS+ AA
Sbjct: 708 IRQKDLIDMAADRGRYIDQSQSLNLFLATPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAA 767
Query: 765 DAIKFTVDTSVFKEKPEKPE 784
DAIKFT+D KE P KP+
Sbjct: 768 DAIKFTLDPKAMKELP-KPD 786
>gi|3914639|sp|O15909.1|RIR1_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|2411477|gb|AAB70704.1| ribonucleotide reductase large subunit [Trypanosoma brucei]
Length = 838
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/800 (58%), Positives = 589/800 (73%), Gaps = 39/800 (4%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V KRDG E + +R+ L G+ + + D + + V GV +G++TS LDEL AE
Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY LA R+AV+ LHK T +S ++ + ++ H ++ + APLI++++++
Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATKRHAPLISEELWD 127
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVSIG 177
I K++A L I Y+RDFD++YFG+KTLERSYLL+V +VVERPQ M +RV++G
Sbjct: 128 IANKHSAALQQIINYERDFDFEYFGYKTLERSYLLRVHKGRGVMEVVERPQQMFLRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH +D++ +TY MSQ +FTHA+PTLFNAGTP PQ+SSCFLV M++DSI+GIY+TLK+
Sbjct: 188 IHGEDLERVKETYDYMSQGFFTHATPTLFNAGTPFPQMSSCFLVAMREDSIDGIYDTLKQ 247
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG+ +HNIRA GSYI GTNGTSNG+VPMLRV+N+TARYVDQGGGKRKGAF
Sbjct: 248 CAIISKSAGGIGIHMHNIRAAGSYIAGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
A+YLEPWHADIF FL LKKN GKE+ RARDLFY LW+PDLFMERV+++G W+L PN A
Sbjct: 308 AIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMDPNTAP 367
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
L+DC+G EF LY YEREG+ + +QAQ LWF IL SQ+ETG P+ML+KD CN KSNQ
Sbjct: 368 FLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQ 427
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTS E AVCNLASIALPRFV K+
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFV--------------------KD 467
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
FD+ L EVT +VT NLN++ID N+YPV AR SNLRHRP+GIGVQGLAD F LL +
Sbjct: 468 GAFDYVALKEVTKVVTRNLNRVIDRNHYPVCEARYSNLRHRPVGIGVQGLADAFALLSLP 527
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR 597
F PEA++LN+ IFETIY A++ S+E+A K+GPYET+ SP S+G LQ D+W+ R
Sbjct: 528 FAHPEAKKLNRQIFETIYIAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIR 587
Query: 598 -------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
WDW L++ + K G+RNSLL+APMPTASTSQILGNNEC EP+TSNIY
Sbjct: 588 GMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLIAPMPTASTSQILGNNECIEPFTSNIY 647
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWE 704
RRVLSGEF VVNKHL+ +L + +W+ ++ KII +GSV I EIPE ++ +YK VWE
Sbjct: 648 VRRVLSGEFPVVNKHLVKELIRLRLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWE 707
Query: 705 IKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAA 764
I+Q L+DMA DRG YIDQSQSLN+ + P ++TS+HF +W +GLKTGMYYLRS+ AA
Sbjct: 708 IRQKDLIDMAADRGRYIDQSQSLNLFLATPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAA 767
Query: 765 DAIKFTVDTSVFKEKPEKPE 784
DAIKFT+D KE P KP+
Sbjct: 768 DAIKFTLDPKAMKELP-KPD 786
>gi|320038060|gb|EFW19996.1| ribonucleoside-diphosphate reductase large subunit [Coccidioides
posadasii str. Silveira]
Length = 643
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/660 (67%), Positives = 538/660 (81%), Gaps = 18/660 (2%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK 91
EH D ++QKV +GVY+GVTT +LD LAAETAA MT HPDYA LAARIAVSNLHK TK
Sbjct: 2 EHVDAAAITQKVISGVYQGVTTIELDNLAAETAAYMTVTHPDYAILAARIAVSNLHKQTK 61
Query: 92 KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTL 151
K FS I D+Y++ N ++ AP+I+ YEI+MK++A L+S I+YDRDF+Y YFGFKTL
Sbjct: 62 KQFSSVIDDLYHYINPKNNRPAPMISQKTYEIVMKHSAELNSAIVYDRDFNYQYFGFKTL 121
Query: 152 ERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTP 211
ERSYLL++ GKV ERPQHM+MRV++GIH +DI+ AI+TY++MSQ++FTHASPTLFNAGTP
Sbjct: 122 ERSYLLRINGKVAERPQHMIMRVAVGIHGEDIEKAIETYNLMSQKFFTHASPTLFNAGTP 181
Query: 212 RPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNG 271
+PQ++SCFL+ MK+DSIEGIY+TLK CA+ISK+AGGIG++VH IRATGSYI GTNG+SNG
Sbjct: 182 QPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAGGIGLNVHRIRATGSYIAGTNGSSNG 241
Query: 272 IVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYA 331
I+PMLRVFN+TARYVDQGG KR GAFA+YLEPWH+DIFEFL+L+KNHGKEE RARDLF A
Sbjct: 242 IIPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHSDIFEFLDLRKNHGKEEVRARDLFLA 301
Query: 332 LWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWF 391
LW PDLFM+RV+ NG W+LFCPNEA GLAD +G EFE LY YE+EG+ +K ++AQ LW+
Sbjct: 302 LWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGDEFEALYEQYEKEGRGRKTIKAQKLWY 361
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
IL +Q ETG P+ML+KD CNRKSNQ+NLGTI+SSNLCTEIIEYTSP E AVCNLAS+AL
Sbjct: 362 AILEAQTETGNPFMLYKDACNRKSNQKNLGTIRSSNLCTEIIEYTSPDEVAVCNLASLAL 421
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
P +V PV RG +DF KL EVT ++ NLNKIID N+YPV AR
Sbjct: 422 PTYVD----PV----------RGE----YDFGKLHEVTQVLVRNLNKIIDGNHYPVPEAR 463
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
+SN RHRPI +GVQGLAD F+ L + F+SPEA+QLN IFETIY+ AL S +IA +GP
Sbjct: 464 KSNFRHRPIAVGVQGLADAFLALRLPFDSPEARQLNIQIFETIYHAALTASCDIAKVDGP 523
Query: 572 YETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILG 631
YETY SPVS+G+LQ DMWNV P+D WDW L+ I+K+GVRNSLLVAPMPTASTSQILG
Sbjct: 524 YETYEGSPVSQGVLQYDMWNVTPTDLWDWDSLKRDIAKHGVRNSLLVAPMPTASTSQILG 583
Query: 632 NNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEI 691
NECFEPYTSNIYSRRVL+GEF VVN LL DL ++G+WS +KN+II + GS+Q IP I
Sbjct: 584 FNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVDLGLWSDNMKNRIIAEGGSIQSIPNI 643
>gi|387593978|gb|EIJ89002.1| ribonucleoside-diphosphate reductase large subunit [Nematocida
parisii ERTm3]
Length = 786
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/810 (56%), Positives = 589/810 (72%), Gaps = 31/810 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
++K+ R E D + LK ++ GL + +++K+ GV +TT +L LAAE
Sbjct: 7 ILKKGNRVEYSQ-DILLEYLKGMASGLDSTFIKVNELAEKITMGVCDDMTTEELGVLAAE 65
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA MTT+HP Y+ LA RI S L K+T FSE + + N + LK +I++ I +
Sbjct: 66 TAADMTTSHPHYSLLAGRIEASFLQKSTPSKFSEAMMKLSNSIIYGTDLKTEIISEKILD 125
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
II+KN LDS I +RDF++ YFG KTL+RSYLLK ++ERPQ++ MRVS+GIH++D
Sbjct: 126 IILKNRERLDSAIKDERDFEFSYFGIKTLKRSYLLKSNNVIIERPQYLWMRVSVGIHEND 185
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
I+S I+TY +MS + F HA+PTLFN+GT PQLSSCFL+ M+ DSI+GIY TLK+CAVIS
Sbjct: 186 IESVIQTYELMSTKHFIHATPTLFNSGTISPQLSSCFLLAMQSDSIDGIYNTLKQCAVIS 245
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K AGGIGV++HNIR TGSYI+GT G SNGI+PMLRVF+ T++YVDQGG KR G+ VY+E
Sbjct: 246 KHAGGIGVNIHNIRGTGSYIKGTFGHSNGIIPMLRVFDATSKYVDQGGNKRPGSIVVYIE 305
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWH DIF+FL+L+KN GKEE RAR+LF LWVPDLFM+RV+ +G W+LFCPN A GL +
Sbjct: 306 PWHRDIFDFLDLRKNTGKEEMRARNLFLGLWVPDLFMKRVEEDGDWALFCPNMAKGLHEK 365
Query: 363 WGAEFEKLYTHYEREGKA-KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G EFE+LY YE+E + KKVV A+ LW IL ++IETG PY+L+KD+CNRKSNQ+NLG
Sbjct: 366 YGDEFEELYVQYEKEERVEKKVVPARKLWKAILEAEIETGVPYILYKDSCNRKSNQKNLG 425
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
IK SNLC EI+EYT P E AVCNLAS+ALP ++ +N F+
Sbjct: 426 VIKGSNLCAEIVEYTDPNEIAVCNLASLALPTYI--------------------ENNEFN 465
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F KL EV IV +NLNKIIDVN YP+E A+ SN++HRPIG+GVQGLAD +ILLG FES
Sbjct: 466 FNKLKEVAKIVAKNLNKIIDVNKYPLEQAKNSNMKHRPIGMGVQGLADVYILLGYPFESK 525
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA +LNK IFETIY+ AL+ S+E+A K GPYE+Y SPVSKGILQ DMW V PSDRWDW
Sbjct: 526 EAAELNKAIFETIYFGALEASNELAQKYGPYESYAGSPVSKGILQYDMWGVQPSDRWDWA 585
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+ +GVRNSLLVA MPTASTSQILG NECFE +TSNIY+RR LSGEF +VN HL+
Sbjct: 586 GLKKKIAAHGVRNSLLVALMPTASTSQILGFNECFEGFTSNIYTRRTLSGEFQIVNSHLV 645
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L ++G+W P +KN II +GS+Q IP IP+ +K +YKTVWEIKQ ++D A DRG Y+
Sbjct: 646 KNLADLGLWGPEMKNIIIEHEGSIQNIPSIPDSIKQLYKTVWEIKQKAVIDQAADRGAYV 705
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
DQSQS+NIH+ P F ++TS+HF W +GLKTG YYLR++ + AIKFTVD +E +
Sbjct: 706 DQSQSMNIHISTPTFAQLTSMHFYGWKKGLKTGTYYLRTKPSQAAIKFTVDKQQAQEYLQ 765
Query: 782 KPELVVDDETKMAQVVCSLTNREECMACGS 811
K E+ A CSL +C++CGS
Sbjct: 766 K-------ESAPAPATCSLDG--DCLSCGS 786
>gi|387595820|gb|EIJ93443.1| ribonucleoside-diphosphate reductase large subunit [Nematocida
parisii ERTm1]
Length = 786
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/810 (56%), Positives = 589/810 (72%), Gaps = 31/810 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
++K+ R E D + LK ++ GL + +++K+ GV +TT +L LAAE
Sbjct: 7 ILKKGNRVEYSQ-DILLEYLKGMASGLDSTFIKVNELAEKITMGVCDDMTTEELGVLAAE 65
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA MTT+HP Y+ LA RI S L K+T FSE + + N + LK +I++ I +
Sbjct: 66 TAADMTTSHPHYSLLAGRIEASFLQKSTPSKFSEAMMKLSNSIIYGTDLKTEIISEKILD 125
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
II+KN LDS I +RDF++ YFG KTL+RSYLLK ++ERPQ++ MRVS+GIH++D
Sbjct: 126 IILKNRERLDSAIKDERDFEFSYFGIKTLKRSYLLKSNNVIIERPQYLWMRVSVGIHEND 185
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
I+S I+TY +MS + F HA+PTLFN+GT PQLSSCFL+ M+ DSI+GIY TLK+CAVIS
Sbjct: 186 IESVIQTYELMSTKHFIHATPTLFNSGTISPQLSSCFLLAMQSDSIDGIYNTLKQCAVIS 245
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K AGGIGV++HNIR TGSYI+GT G SNGI+PMLRVF+ T++YVDQGG KR G+ VY+E
Sbjct: 246 KHAGGIGVNIHNIRGTGSYIKGTFGHSNGIIPMLRVFDATSKYVDQGGNKRPGSIVVYIE 305
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWH DIF+FL+L+KN GKEE RAR+LF LWVPDLFM+RV+ +G W+LFCPN A GL +
Sbjct: 306 PWHRDIFDFLDLRKNTGKEEMRARNLFLGLWVPDLFMKRVEEDGDWALFCPNMAKGLHEK 365
Query: 363 WGAEFEKLYTHYEREGKA-KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G EFE+LY YE+E + KKVV A+ LW IL ++IETG PY+L+KD+CNRKSNQ+NLG
Sbjct: 366 YGDEFEELYVQYEKEERVEKKVVPARKLWKAILEAEIETGVPYILYKDSCNRKSNQKNLG 425
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
IK SNLC EI+EYT P E AVCNLAS+ALP ++ +N F+
Sbjct: 426 VIKGSNLCAEIVEYTDPNEIAVCNLASLALPTYI--------------------ENNEFN 465
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F KL EV IV +NLNKIIDVN YP+E A+ SN++HRPIG+GVQGLAD +ILLG FES
Sbjct: 466 FNKLKEVAKIVAKNLNKIIDVNKYPLEQAKNSNMKHRPIGMGVQGLADVYILLGYPFESK 525
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA +LNK IFETIY+ AL+ S+E+A K GPYE+Y SPVSKGILQ DMW V PS+RWDW
Sbjct: 526 EAAELNKAIFETIYFGALEASNELAQKYGPYESYAGSPVSKGILQYDMWGVQPSNRWDWA 585
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+ +GVRNSLLVA MPTASTSQILG NECFE +TSNIY+RR LSGEF +VN HL+
Sbjct: 586 GLKKKIAAHGVRNSLLVALMPTASTSQILGFNECFEGFTSNIYTRRTLSGEFQIVNSHLV 645
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
+L ++G+W P +KN II +GS+Q IP IP+ +K +YKTVWEIKQ ++D A DRG Y+
Sbjct: 646 KNLADLGLWGPEMKNIIIEHEGSIQNIPSIPDSIKQLYKTVWEIKQKAVIDQAADRGAYV 705
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
DQSQS+NIH+ P F ++TS+HF W +GLKTG YYLR++ + AIKFTVD +E +
Sbjct: 706 DQSQSMNIHISTPTFAQLTSMHFYGWKKGLKTGTYYLRTKPSQAAIKFTVDKQQAQEYLQ 765
Query: 782 KPELVVDDETKMAQVVCSLTNREECMACGS 811
K E+ A CSL +C++CGS
Sbjct: 766 K-------ESAPAPATCSLDG--DCLSCGS 786
>gi|296217190|ref|XP_002754897.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 3 [Callithrix jacchus]
Length = 711
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/664 (67%), Positives = 535/664 (80%), Gaps = 19/664 (2%)
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFN 207
KTLERSYLLK+ GKV ERPQHMLMRVS+GIHK+DID+AI+TY+++S+RWFTHASPTLFN
Sbjct: 67 LKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFN 126
Query: 208 AGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNG 267
AGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG
Sbjct: 127 AGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNG 186
Query: 268 TSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARD 327
SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARD
Sbjct: 187 NSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARD 246
Query: 328 LFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQ 387
LF+ALW+PDLFM+RV+TN WSL CPNE GL + WG EFEKLY YE++ + +KVV+AQ
Sbjct: 247 LFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQRRVRKVVKAQ 306
Query: 388 NLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLA 447
LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLA
Sbjct: 307 QLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA 366
Query: 448 SIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPV 507
S+AL +V + +DF+KLAEVT ++ NLNKIID+NYYPV
Sbjct: 367 SLALNMYV-------------------TSEHTYDFQKLAEVTKVIVRNLNKIIDINYYPV 407
Query: 508 ETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAA 567
A SN RHRPIGIGVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A
Sbjct: 408 PEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAK 467
Query: 568 KEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTS 627
+ GPYETY SPVS+GILQ DMWNV P+D WDW +L++ I+K G+RNSLL+APMPTAST+
Sbjct: 468 EHGPYETYEGSPVSRGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTA 527
Query: 628 QILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQK 687
QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q
Sbjct: 528 QILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQS 587
Query: 688 IPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTW 747
IPEIP++LK +YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W
Sbjct: 588 IPEIPDDLKQLYKTVWEISQKTVLRMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGW 647
Query: 748 SRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECM 807
+GLKTGMYYLR+R AA+ I+FT++ K+K + + + E A ++CSL NR+EC+
Sbjct: 648 KQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMMCSLENRDECL 707
Query: 808 ACGS 811
CGS
Sbjct: 708 MCGS 711
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDY 74
AETAA + T Y
Sbjct: 61 AETAATLKTLERSY 74
>gi|410084533|ref|XP_003959843.1| hypothetical protein KAFR_0L01000 [Kazachstania africana CBS 2517]
gi|372466436|emb|CCF60708.1| hypothetical protein KAFR_0L01000 [Kazachstania africana CBS 2517]
Length = 885
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/766 (57%), Positives = 577/766 (75%), Gaps = 15/766 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E V FDKITAR+ +L YGL H D V V+Q++ GVY+GVTTS+LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARISRLCYGLDPTHVDAVKVTQRIITGVYEGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A MTT HPDY LAAR+A+SNLHK T K FS+ ++D++ + N R+G APL+++++
Sbjct: 61 AETCAFMTTLHPDYGQLAARLAISNLHKQTTKQFSKVVEDLHAYVNPRNGRHAPLVSEEL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ + ++S I+YDRD+ + YFGFK LERSYLL++ G+VVERPQH++MRV++GIH
Sbjct: 121 LQIVKDHKDEINSAIVYDRDYQFTYFGFKALERSYLLRLNGEVVERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+I++AI+TY++MS ++F H S TLFNAGT Q+SS + V MKDDSIEGIY+TLKECA+
Sbjct: 181 DNIEAAIETYNLMSLKYFIHGSSTLFNAGTVNSQMSSSYTVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SKSAGG+G+ V NIR+TGSYI GTNGTSNGI+PM+RV+N+TAR+VDQGG KR GA A+Y
Sbjct: 241 VSKSAGGMGLHVTNIRSTGSYIAGTNGTSNGIIPMVRVYNNTARFVDQGGNKRPGAVAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+F+++KK GK+E RARDL ALWVPDLFM+RV +G W+LF P+ A GL
Sbjct: 301 IEPWHADIFDFIDVKKTSGKDEIRARDLLPALWVPDLFMQRVHEDGDWTLFSPSAAPGLV 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ LYT YEREG+ K ++AQ LW+ IL +Q + P M++KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYTRYEREGRG-KTIKAQKLWYCILEAQNDCSAPIMVYKDPCNKKSNQKNL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNL +++ Y+ ET N+AS+ALP F+ S K +
Sbjct: 420 GTIKSSNLSGDVVVYSDAKETPASNMASLALPAFIEI--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+KL ++T IVT NLN IID N YPV ARR+ L+HRPI IGVQGLADTF+ L +AF+S
Sbjct: 466 NFKKLHDITKIVTRNLNVIIDRNTYPVPEARRATLKHRPIAIGVQGLADTFMTLRLAFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EAQ LN+ IFETIY+ +L+ S E+A K+GPY++++ SP S+GILQ D+W+ PS WDW
Sbjct: 526 AEAQLLNQQIFETIYHASLEASVELAKKDGPYQSFNGSPSSRGILQMDLWDAKPSGVWDW 585
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I + G+RNSL A MPT+STSQILG ECFEP +SN+Y RVLSGEF VVN +L
Sbjct: 586 DALRKDIMEYGLRNSLTTAAMPTSSTSQILGYTECFEPISSNMYQHRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL ++GIW T+K I+ +GS+Q +P +P+ELK IYKT WEI Q ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDETMKQHIVSQNGSIQALPNVPQELKAIYKTAWEISQKKIIDMATDRAIY 705
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADA 766
IDQSQSL++ + K+TS+HF W++GLKTGMY L S+ A A
Sbjct: 706 IDQSQSLSLFLRATTMGKITSMHFYGWNKGLKTGMYKLNSQPVAAA 751
>gi|50549777|ref|XP_502360.1| YALI0D03333p [Yarrowia lipolytica]
gi|49648228|emb|CAG80548.1| YALI0D03333p [Yarrowia lipolytica CLIB122]
Length = 849
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/777 (59%), Positives = 574/777 (73%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKR G++E + K T RL L + LS+ ++QK G + GV+T +L+ LA
Sbjct: 1 MHVVKRGGQREPMDMAKFTRRLTALCFNLSSV-VSATEIAQKTVDGAFDGVSTVELNNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
+ETAAA+ T HPDY LAAR++VSNLHK T F ++ +Y++ +E +G APL+ +
Sbjct: 60 SETAAALMTRHPDYGVLAARLSVSNLHKQTSDKFVNVMQQLYDNKDE-TGEHAPLVTLAL 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E + L+ I Y RD Y YFGFKTLE+SYLL+V G VVERPQHMLMRV++GIH
Sbjct: 119 LERAQNHGETLELAISYYRDMTYSYFGFKTLEKSYLLRVGGNVVERPQHMLMRVALGIHG 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI +TY +S R FTHASPTLFNAGTP+ QLSSCFLV M DSI+GIY+TLK CA
Sbjct: 179 DDIFKVRETYQALSLRKFTHASPTLFNAGTPQGQLSSCFLVAMAADSIDGIYDTLKTCAQ 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA G+ I G+ G S+GIVPMLRVFN+TARYVDQGG KR GAFAVY
Sbjct: 239 ISKTAGGIGLHIHNIRAKGALITGSQGRSSGIVPMLRVFNNTARYVDQGGNKRPGAFAVY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FLNL+KNHG EE+RARDLFYALWVPDLFM +V+ +WSLFCP +A GLA
Sbjct: 299 LEPWHADILDFLNLRKNHGAEENRARDLFYALWVPDLFMRKVENGEKWSLFCPRKAPGLA 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EF++ Y YE +G + AQ L+ ILTSQIETG P+ML+KD+CN KSNQ+NL
Sbjct: 359 DVWGEEFDRKYEDYESKGLYNSQIDAQELFKAILTSQIETGGPFMLYKDSCNAKSNQKNL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI++Y+SP E AVCNLAS+ALP FV+ K GS GS +
Sbjct: 419 GTIKSSNLCTEIVQYSSPDEVAVCNLASVALPEFVQLK------------GSSGS----Y 462
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F +L E +T NLN II+ N YPV+ A SN RHRPI +GVQGLAD F+ L M F+S
Sbjct: 463 NFGELHETVKHMTRNLNCIIEANCYPVKEAETSNKRHRPIAVGVQGLADVFMKLRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEA +LN IFETIY+ A + S E+AA+ GPYETY SP S+G LQ D+WN PSD WDW
Sbjct: 523 PEAAELNVLIFETIYHAACEASIELAAELGPYETYEGSPASQGKLQFDLWNKTPSDLWDW 582
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILG+NECFEPYTSNIY RRV +GEF+VVN+ L
Sbjct: 583 ARLKTKLAKHGMRNSLLVAPMPTASTSQILGHNECFEPYTSNIYLRRVQAGEFLVVNQWL 642
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL ++G+W+ +KN+II+D+GS+Q I +IPE ++ +Y+T WEIK ++DMA R Y
Sbjct: 643 MKDLIKLGMWTEEMKNRIIHDNGSIQSITQIPEHIRAVYRTAWEIKARNIIDMAAARAPY 702
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
IDQSQSLNI M + K+T++HF W GLKTGMYYLR+ AA AI+FTVD ++ +
Sbjct: 703 IDQSQSLNIFMPEITHGKITAMHFHGWKAGLKTGMYYLRTPPAAHAIQFTVDKTLLQ 759
>gi|402894484|ref|XP_003910386.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Papio anubis]
Length = 711
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/659 (67%), Positives = 533/659 (80%), Gaps = 19/659 (2%)
Query: 153 RSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR 212
RSYLLK+ GKV ERPQHMLMRVS+GIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT R
Sbjct: 72 RSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNR 131
Query: 213 PQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGI 272
PQLSSCFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+
Sbjct: 132 PQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGL 191
Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYAL 332
VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+AL
Sbjct: 192 VPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFAL 251
Query: 333 WVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFE 392
W+PDLFM+RV+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+
Sbjct: 252 WIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYA 311
Query: 393 ILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 452
I+ SQ ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL
Sbjct: 312 IIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALN 371
Query: 453 RFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARR 512
+V + +DF+KLAEVT +V NLNKIID+NYYPV A
Sbjct: 372 MYV-------------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACL 412
Query: 513 SNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPY 572
SN RHRPIGIGVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A ++GPY
Sbjct: 413 SNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPY 472
Query: 573 ETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
ETY SPVSKGILQ DMWNV P+D WDW +L++ I+K G+RNSLL+APMPTAST+QILGN
Sbjct: 473 ETYEGSPVSKGILQYDMWNVTPTDLWDWNLLKENIAKYGIRNSLLIAPMPTASTAQILGN 532
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIP 692
NE EPYTSNIY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q IPEIP
Sbjct: 533 NESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIP 592
Query: 693 EELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLK 752
++LK +YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLK
Sbjct: 593 DDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLK 652
Query: 753 TGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
TGMYYLR+R AA+ I+FT++ K+K + + + E A +VCSL NR+EC+ CGS
Sbjct: 653 TGMYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 711
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 44/57 (77%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLD 57
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELD 57
>gi|194389080|dbj|BAG61557.1| unnamed protein product [Homo sapiens]
Length = 683
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/632 (69%), Positives = 519/632 (82%), Gaps = 19/632 (3%)
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFN 207
FKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK+DID+AI+TY+++S+RWFTHASPTLFN
Sbjct: 67 FKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFN 126
Query: 208 AGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNG 267
AGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG
Sbjct: 127 AGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNG 186
Query: 268 TSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARD 327
SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARD
Sbjct: 187 NSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARD 246
Query: 328 LFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQ 387
LF+ALW+PDLFM+RV+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ
Sbjct: 247 LFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQ 306
Query: 388 NLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLA 447
LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLA
Sbjct: 307 QLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA 366
Query: 448 SIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPV 507
S+AL +V + +DF+KLAEVT +V NLNKIID+NYYPV
Sbjct: 367 SLALNMYV-------------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPV 407
Query: 508 ETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAA 567
A SN RHRPIGIGVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A
Sbjct: 408 PEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAK 467
Query: 568 KEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTS 627
++GPYETY SPVSKGILQ DMWNV P+D WDW VL++ I+K G+RNSLL+APMPTAST+
Sbjct: 468 EQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTA 527
Query: 628 QILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQK 687
QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q
Sbjct: 528 QILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQS 587
Query: 688 IPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTW 747
IPEIP++LK +YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W
Sbjct: 588 IPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGW 647
Query: 748 SRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 648 KQGLKTGMYYLRTRPAANPIQFTLNKEKLKDK 679
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 53/74 (71%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDY 74
AETAA T Y
Sbjct: 61 AETAATFKTLERSY 74
>gi|406604711|emb|CCH43846.1| ribonucleoside-diphosphate reductase subunit M1 [Wickerhamomyces
ciferrii]
Length = 833
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/802 (55%), Positives = 593/802 (73%), Gaps = 16/802 (1%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
+ K DG ++ +K+ LK LS GL T H + + KV G+ VTT QL +LA+E
Sbjct: 6 IQKSDGSKQRFQLEKLINTLKNLSKGLDTNHINFEELGNKVFNGLPDEVTTDQLIDLASE 65
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
T A +TT HPD+A LA+R++V+ L KN FSE + ++N YN+++ +PLI++ +Y+
Sbjct: 66 TLATLTTLHPDHAILASRLSVTRLSKNIPSKFSECTEKLWNFYNKKTKSHSPLISEKVYK 125
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
I+ +N LDS I +RD + +FG +TL++SYLLK+ G E PQ M +RVS+GIH DD
Sbjct: 126 IVQENKDLLDSVIDSERDLSFTFFGLETLKKSYLLKINGIWAETPQFMYLRVSLGIHGDD 185
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
+DSAI+TY++MSQ++F HASPTLFN+GTP LSSCFL+ + +DSI+GIY TL CA+IS
Sbjct: 186 LDSAIETYNLMSQKYFIHASPTLFNSGTPNAYLSSCFLLGIDEDSIDGIYGTLHRCALIS 245
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K+AGGIG+ V NIR++GSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFAVY+E
Sbjct: 246 KAAGGIGIHVSNIRSSGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVYVE 305
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWH+DIFEFL+L+KNHGKEE RARDLFYALW+PDLFM+ V+ + W LF PNEA GL D
Sbjct: 306 PWHSDIFEFLDLRKNHGKEEMRARDLFYALWIPDLFMKAVKEDDDWHLFSPNEAKGLTDV 365
Query: 363 WGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGT 422
+G +FEKLY Y +EG A + V+AQ LW+ IL SQ ETG P+ML+KD CN KSNQ+NLGT
Sbjct: 366 YGEDFEKLYEQYVKEGLATRTVKAQKLWYAILESQTETGGPFMLYKDACNIKSNQKNLGT 425
Query: 423 IKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDF 482
IKSSNLC E++EY+S E AVCNLAS+ALP +V +D + +F+F
Sbjct: 426 IKSSNLCCEVVEYSSKDEVAVCNLASVALPSYVSYEDNIM----------------WFNF 469
Query: 483 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPE 542
KL +V +VT NLNK+IDV YP+ A SNL+HRPI +GVQGLAD F+ L + FES E
Sbjct: 470 NKLHDVVKVVTRNLNKVIDVGKYPIPEAENSNLKHRPIAVGVQGLADLFMELRLPFESSE 529
Query: 543 AQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGV 602
A+ LN IFETIY+ +++ S E+A K+G Y+++ SP S+G LQ D+WN P+D +DW
Sbjct: 530 AKLLNIQIFETIYHASVEASIELAQKDGAYKSFIGSPASQGQLQFDLWNHKPTDLYDWDA 589
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L+ + +G+RNSLLVAPMPTASTSQILG ECFEP TSN+YSRRVLSGEF +VNK+L+
Sbjct: 590 LKAKVRAHGLRNSLLVAPMPTASTSQILGFTECFEPLTSNVYSRRVLSGEFQIVNKYLIK 649
Query: 663 DLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYID 722
DL ++GIW +KN+I+ +GS+Q I IP+E+K +YKTVWEI Q ++++A DR +ID
Sbjct: 650 DLIDLGIWDLNLKNQIVDSNGSIQDIKTIPQEIKELYKTVWEISQKNIINLAADRAPFID 709
Query: 723 QSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEK 782
QSQS+NIH+ +P +K+TS+HF WS+GLKTGMYYLR++AA++AIKFT+D S+ ++ ++
Sbjct: 710 QSQSMNIHIKEPTMRKLTSMHFYGWSKGLKTGMYYLRTQAASEAIKFTIDRSLEVKEEKQ 769
Query: 783 PELVVDDETKMAQVVCSLTNRE 804
+ V + + + TN++
Sbjct: 770 ANIEVLSKKRKYVPITDTTNKK 791
>gi|378756094|gb|EHY66119.1| ribonucleoside-diphosphate reductase [Nematocida sp. 1 ERTm2]
Length = 785
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/810 (57%), Positives = 589/810 (72%), Gaps = 32/810 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
++KR G++ + + + LKK++ GL + +++K+ GV G+TT +L L AE
Sbjct: 7 ILKR-GKEVEYNQEILLEHLKKMAVGLDSTFIKVTELAEKITMGVCDGMTTEELGTLTAE 65
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA MTT+HP Y+ LA RI S L K+T +FS+ + + + LK +I+ DI E
Sbjct: 66 TAATMTTSHPHYSLLAGRIEASLLQKSTPSTFSDAMCMLATTSINGTDLKTEIISPDIIE 125
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
I+MKN LD+ I DRDF++ YFG KTL RSYLLKV +VERPQ+M MRVS+GIH+DD
Sbjct: 126 IVMKNKERLDAAIQNDRDFEFSYFGIKTLTRSYLLKVNNVIVERPQYMWMRVSVGIHRDD 185
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
ID+ I+TY +MS + F HA+PTLFN+GT PQLSSCFL+ M+ DSI+GIY TLK+CAVIS
Sbjct: 186 IDAVIETYELMSTKHFIHATPTLFNSGTISPQLSSCFLLAMQSDSIDGIYNTLKQCAVIS 245
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K AGGIGV++HNIR TGSYI+GT G SNGI+PMLRVF+ T++YVDQGG KR G+ VY+E
Sbjct: 246 KHAGGIGVNIHNIRGTGSYIKGTFGHSNGIIPMLRVFDATSKYVDQGGNKRPGSIVVYIE 305
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWH DIF+FL+LKKN GKEE RAR+LF LW+PDLFM RV+ +G W LFCPN A GL +
Sbjct: 306 PWHRDIFDFLDLKKNTGKEEMRARNLFLGLWIPDLFMRRVEEDGDWCLFCPNLAKGLHEK 365
Query: 363 WGAEFEKLYTHYEREGK-AKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G+EFE+LYT YE+ + KKV+ A+ LW IL ++IETG PY+L+KD+CNRKSNQ+NLG
Sbjct: 366 YGSEFEELYTTYEKTPEIEKKVISARKLWKAILEAEIETGVPYILYKDSCNRKSNQKNLG 425
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
IK SNLC EI+EYT P+E AVCNLAS+ALP ++ +N+ F+
Sbjct: 426 VIKGSNLCAEIVEYTDPSEIAVCNLASLALPTYI--------------------ENKQFN 465
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F KL EV IV +NLNKIIDVN YP+E A+ SNL++RPIGIGVQGLAD +ILLG FES
Sbjct: 466 FNKLKEVAKIVAKNLNKIIDVNKYPLEEAKYSNLKNRPIGIGVQGLADVYILLGYPFESK 525
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA +LNK IFETIYY AL+ S E+A GPY++Y SPVS+GILQ DMW+V PSDRWDW
Sbjct: 526 EAAELNKAIFETIYYGALEASCELAEIHGPYKSYAGSPVSQGILQYDMWDVQPSDRWDWA 585
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+ +GVRNSLLVA MPTASTSQILG NECFE +TSNIY+RR LSGEF +VN HL+
Sbjct: 586 GLKKRIAAHGVRNSLLVALMPTASTSQILGFNECFEGFTSNIYTRRTLSGEFQIVNMHLV 645
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL ++G+W P +KN II +GS+Q IP IP+ +K++YKTVWEIKQ ++D A DRG Y+
Sbjct: 646 KDLADLGLWGPEMKNIIIEHEGSIQNIPSIPDNIKLLYKTVWEIKQKAVIDQAADRGAYV 705
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
DQSQS+NIH+ P F ++TS+HF W +GLKTG YYLR++ AIKFTVD KE +
Sbjct: 706 DQSQSMNIHISAPTFAQLTSMHFYGWKKGLKTGTYYLRTKPTQAAIKFTVDKQQAKEYLQ 765
Query: 782 KPELVVDDETKMAQVVCSLTNREECMACGS 811
K CSL +C++CGS
Sbjct: 766 K--------ESSPPATCSLDG--DCLSCGS 785
>gi|18640128|ref|NP_570202.1| SPV042 ribonucleotide reductase large chain [Swinepox virus]
gi|18448535|gb|AAL69781.1| SPV042 ribonucleotide reductase large chain [Swinepox virus]
Length = 757
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/774 (56%), Positives = 576/774 (74%), Gaps = 21/774 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KR G++E + +KIT R+ L Y L D ++ ++ G+Y + T +D A
Sbjct: 1 MYVIKRSGKKELLSIEKITKRIDNLCYDLDKNFIDANYLANEIIKGLYNNIRTKDIDTFA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
+E A T H DY +LA+RI VS LHK T +SFS+ I +YN+ N +G P++++ +
Sbjct: 61 SELIAGFITRHYDYDTLASRIVVSKLHKETTESFSDVIHTLYNYINPNNGNHLPMVSEYL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ + K+ +D+ I YDRD+ Y YFG KTLE+SYLLK K++ERPQHMLMRVS+GIH
Sbjct: 121 YQQVNKHRDIIDNVIAYDRDYSYSYFGIKTLEKSYLLKQNNKIIERPQHMLMRVSLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID I+TY+ +S++WF HASPTLFNAGTP PQ+SSCF++ +KDDSIEGI++TLK+CA+
Sbjct: 181 GDIDDVIETYNYLSEKWFIHASPTLFNAGTPLPQMSSCFILPIKDDSIEGIFDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA G+YI G NG SNGIVPMLR++N+T RY++QGG KR GA ++Y
Sbjct: 241 ISKHAGGIGLSISNIRAKGTYISGINGKSNGIVPMLRIYNNTVRYINQGGDKRPGAMSIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+L+KN G EE+R +DLF ALWVPDLFMERV+ + +WSL CP E GL
Sbjct: 301 IEPWHADIFDFLSLRKNVGNEEYRTKDLFTALWVPDLFMERVEKDEEWSLMCPCECPGLC 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG +F KLY YE + K K +V+A++LW I+ +QIE GTPY+L+KD+CN+KSNQ NL
Sbjct: 361 DVWGNDFNKLYIEYETKKKIKAIVKARSLWKSIIEAQIEQGTPYILYKDSCNKKSNQSNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLCTEII++++ E AVCNL SI+L +FV N F
Sbjct: 421 GTIRSSNLCTEIIQFSNEDEVAVCNLGSISLSKFV--------------------NNNVF 460
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
F+KL +T I+ +NLNKIID+NYYPV + RSN +HRPIGIGVQGLAD FILLG AF+S
Sbjct: 461 MFDKLRIITKILVKNLNKIIDINYYPVIESSRSNKKHRPIGIGVQGLADVFILLGYAFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN IFETIYY AL++S E+A GPYETY++SP SKGILQ DMW P+D WDW
Sbjct: 521 EEAKILNIQIFETIYYAALESSCELAKIYGPYETYNDSPASKGILQYDMWLKNPTDLWDW 580
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+ +G+RNSLL+APMPTASTSQIL NNE EPYTSNIY+RRVLSG+F VVN HL
Sbjct: 581 NELKKRINTHGLRNSLLIAPMPTASTSQILSNNESIEPYTSNIYTRRVLSGDFQVVNPHL 640
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L +L +W+ IKN I+ +GS+Q + ++P+ +K IYKTVWEI Q +++MA DRG +
Sbjct: 641 LRELISRNMWNNDIKNTIVLHNGSIQHL-DLPDNIKQIYKTVWEISQKCILEMAADRGAF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
IDQSQS+ I++D P + K+TS+HF W GLKTGMYY+R+++A++ IKFTV+ S
Sbjct: 700 IDQSQSMTIYIDNPTYAKLTSMHFYGWRLGLKTGMYYMRTKSASNPIKFTVECS 753
>gi|91080435|ref|XP_968743.1| PREDICTED: similar to AGAP010198-PA [Tribolium castaneum]
gi|270005755|gb|EFA02203.1| hypothetical protein TcasGA2_TC007860 [Tribolium castaneum]
Length = 798
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/811 (56%), Positives = 583/811 (71%), Gaps = 20/811 (2%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV+KRDGR+E VHFDKIT+R++KL Y L+ + DPV ++ KV G+Y GVTT +LD LAA
Sbjct: 7 YVLKRDGRKEEVHFDKITSRIQKLCYRLNMDIVDPVSITLKVIGGLYPGVTTVELDTLAA 66
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
ETA M +HPDYA+LAARIAVSNL K TKK FS+ I D+Y+ + ++G K PLI+D Y
Sbjct: 67 ETAIVMGADHPDYATLAARIAVSNLQKQTKKHFSDVISDLYHAVDPQTGEKTPLISDQHY 126
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
EIIMKNA+ L+S I+YDRDF Y+YF FK LERSYL K+ GK VERPQHMLMRV++GIH +
Sbjct: 127 EIIMKNASRLNSCIVYDRDFSYNYFAFKLLERSYLFKINGKTVERPQHMLMRVAVGIHGE 186
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DIDSAI+TY+ MS+ +F H+S TL AGTP P L S + + M DDS+EGIYE + C I
Sbjct: 187 DIDSAIETYNYMSEGYFIHSSATLLTAGTPYPYLPSTYSIAMPDDSLEGIYECISNCIKI 246
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
S + G I V + NIRA G+ I GTNG SNG+VPMLRVFN++A ++++ + A++L
Sbjct: 247 SNTTGRISVHIQNIRAKGTEIAGTNGVSNGLVPMLRVFNNSA-WLNRQSENQPSNQAIFL 305
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADI +FLNLK+ GK+E+RARDL YALWVPDLFM RV+ + +WSL CP++A GL +
Sbjct: 306 EPWHADILDFLNLKRTTGKDEYRARDLQYALWVPDLFMHRVKNDEKWSLMCPHQAQGLPN 365
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
CWG EFEKLY YE EG+ K + A+++W I SQ+ETG+PY+L+KD CN+KSNQQNLG
Sbjct: 366 CWGQEFEKLYEKYESEGRFVKQIPARDVWRAICVSQMETGSPYILYKDACNKKSNQQNLG 425
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSS+L TE I+Y+S E A C AS+AL FV +P R +D
Sbjct: 426 TIKSSSLSTESIQYSSSDEIAACITASVALNMFV---------NPER---------NGYD 467
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
FEKL +V +T+NLNK IDV+ YP AR SNLRHRPIGIGVQGLADTFILL M FESP
Sbjct: 468 FEKLKQVVKTLTKNLNKAIDVSAYPSPEARTSNLRHRPIGIGVQGLADTFILLRMPFESP 527
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA+ LN IFET+YY AL+ SSEIA ++GPY TY SP+S+G LQ DMW V P+ WDW
Sbjct: 528 EARSLNVQIFETLYYAALEASSEIAERDGPYSTYDGSPLSQGRLQYDMWGVEPTKLWDWV 587
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+K+GVRNSLLVA +PT ST+QILGNN+ EPY SN+ RRV S EF VN+HLL
Sbjct: 588 ALKQRIAKHGVRNSLLVALIPTISTAQILGNNQSIEPYLSNVQVRRVNSSEFRDVNQHLL 647
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DLTE G+W+ +K ++I +GSVQ I IP++LK IYKTVWEI Q +++MA DRG +I
Sbjct: 648 KDLTERGLWTSDLKQEVIERNGSVQNIAGIPDDLKCIYKTVWEIPQKIVIEMAADRGAFI 707
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFT-VDTSVFKEKP 780
DQSQ++N+H+ P++ ++S+HF W +GLKTGMY LR+ + SV +E
Sbjct: 708 DQSQAMNVHIGAPSYAVMSSMHFYGWQKGLKTGMYNLRTNPVSVVQNGNRSKVSVVQENG 767
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
EK + + + A + CSL N C C +
Sbjct: 768 EKSDDMKKSPEEDAALQCSLQNPGACEMCSA 798
>gi|197322445|ref|YP_002154718.1| putative ribonucleotide reductase large subunit [Feldmannia species
virus]
gi|197130512|gb|ACH46848.1| putative ribonucleotide reductase large subunit [Feldmannia species
virus]
Length = 773
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/776 (56%), Positives = 576/776 (74%), Gaps = 17/776 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KR R+E V FDKIT R++KL GL ++ DPV V+ +V G+Y GVTT +LD LA
Sbjct: 1 MYVIKRSQRRENVMFDKITTRVRKLCEGLDSDFVDPVEVTMRVNQGIYAGVTTVELDLLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A M+TNHPDY+ LAARI +SNL+K T+ + ++ M + N + APL+++++
Sbjct: 61 AETCAFMSTNHPDYSILAARICLSNLYKETESCYKTLVQKMREYVNPETSQHAPLVSEEL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++ N+ + E + + +YDYF FKTLE+SYLLK+ G+V ERP +LMRV+IGIH
Sbjct: 121 ASVVANNSKVI-QEALDEVLENYDYFAFKTLEKSYLLKMDGRVSERPHQLLMRVAIGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+ + ++ + M + +T A+PTLFNAGTP PQ+SSCFL+ K DSI GI+++LK+CA
Sbjct: 180 HDMPNVLRAFRDMRDKRYTMATPTLFNAGTPVPQMSSCFLMTNKADSISGIFDSLKDCAT 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVH++RA GSYIRGTNGTSNG+VPMLRVFN+ ARYVDQGGG+RKG+FAVY
Sbjct: 240 ISKYAGGIGISVHDVRARGSYIRGTNGTSNGLVPMLRVFNNAARYVDQGGGRRKGSFAVY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHAD+ F++L+KNHG + RARDLFYALWVPDLFM+RV+ N WSLFCPNE GL+
Sbjct: 300 LEPWHADVQAFIDLRKNHGNDLERARDLFYALWVPDLFMKRVEKNSAWSLFCPNECPGLS 359
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D G+ FE LY YE +GKA+KV+ A+ LW +I+ Q+ETGTPY+LFKD+ N KSNQQ+L
Sbjct: 360 DVCGSRFEDLYARYESQGKARKVMDARKLWDQIVDVQVETGTPYILFKDSVNAKSNQQHL 419
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLCTEI+EYTSP E AVCNL SI L FVR+ S F
Sbjct: 420 GVIKSSNLCTEIVEYTSPDEIAVCNLGSINLSTFVRDAYTSTAS---------------F 464
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D E+L + NLN++ID N+YPV A SNL+HRPIGIGVQG AD +++ + ++S
Sbjct: 465 DLEELVNFAGRMVLNLNRVIDKNFYPVPEAENSNLKHRPIGIGVQGFADALVMMRLPYDS 524
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKE-GPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
+A LN +IFE+IYY A+K S +A + GP+E++ SP+ +GI Q D+W V PS +D
Sbjct: 525 VDAAGLNLNIFESIYYGAMKQSVHLARSDGGPHESFRGSPLEQGIFQFDLWGVKPSGLYD 584
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + K+GV+N+LLVAPMPTAST+QILGNNE FEP+TSN+Y+RRVL+GEF V+NKH
Sbjct: 585 WEALRADVIKHGVKNALLVAPMPTASTAQILGNNESFEPFTSNVYNRRVLAGEFPVINKH 644
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DLT +G+W +KN+++ +GSVQ IP+IPE++K +YKTVWEI Q ++D A RG
Sbjct: 645 LLRDLTSLGVWGDKVKNQLLRANGSVQNIPQIPEDIKALYKTVWEIPQRVILDHAAARGP 704
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+I QSQS+NIHM +P+ K+TS+ F W +GLKTGMYYLR+R AD+I+F ++ SV
Sbjct: 705 FICQSQSMNIHMAEPSRGKITSMLFYGWRKGLKTGMYYLRTRPKADSIQFALEKSV 760
>gi|312066374|ref|XP_003136240.1| ribonucleoside-diphosphate reductase large subunit [Loa loa]
Length = 1038
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/817 (55%), Positives = 566/817 (69%), Gaps = 94/817 (11%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKRDGR EAV FDKI R+ KL YGLS + D + +SQKV AG+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
E AA M T HPDYA+LA+RIAVSNLHK T+K FS+ K +YN + +SG PLI+ +I+
Sbjct: 72 EIAADMITKHPDYATLASRIAVSNLHKKTEKLFSKVSKRLYNATHPKSGRHMPLISKNIF 131
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+II NA LDS II++RDF Y YFG KTLERSYLL++ G++ ERPQHMLMRV++GIH D
Sbjct: 132 DIIQNNADILDSAIIHERDFCYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGD 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
+I++A++TY++MS+RWFTHA+PTLFN+GT PQ+SSCFL+ M DDSIEGI+ETLK+CA+I
Sbjct: 192 NIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFDDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNG SNG+VPMLRVFN+ AR
Sbjct: 252 SKSAGGIGLNVHCIRATGSAIAGTNGVSNGLVPMLRVFNNAAR----------------- 294
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
KN G E R RDLF+ LWVPDLFMERV+ + WSL CP E GL D
Sbjct: 295 --------------KNVGDELERCRDLFFGLWVPDLFMERVRDDKVWSLMCPAECPGLED 340
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
WG FEKLY YE EG+ +K V A+ LW I+++QIETG PYM++KDTCNRK+NQQNLG
Sbjct: 341 SWGEAFEKLYMQYEEEGRYRKQVPARKLWETIVSTQIETGMPYMVYKDTCNRKTNQQNLG 400
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIK SNLCTE++ Y+S E AVCNLASIAL RFV S FD
Sbjct: 401 TIKCSNLCTEVVLYSSREEIAVCNLASIALSRFV-------------------SSEMTFD 441
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F+ L E+T +V NLNK+ID NYYPV A RSN RHRPIGIGVQGLAD FIL+ F S
Sbjct: 442 FKMLREITKVVVRNLNKVIDRNYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 501
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
+A+ LNK IFET+YY AL+ S E+A ++GPYE+Y SP ILQ DMW V P+++WDW
Sbjct: 502 KARDLNKRIFETMYYAALEASCELAMEQGPYESYERSP----ILQFDMWGVTPTNQWDWE 557
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV------- 654
LR I+ G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y+R VLSG F
Sbjct: 558 TLRKKIAMYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQVKFHDTL 617
Query: 655 ---------------------------------VVNKHLLHDLTEMGIWSPTIKNKIIYD 681
V N HL++DL + +W +K +II +
Sbjct: 618 LIRFERITSEITFLQSFLLIAFLCLEDYVISLKVFNMHLMNDLMRLDLWDDDMKLEIIKN 677
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
GS++ I IP+E++ +YKTVWE+ Q ++DMAVDRG +ID SQSLNI + +PN+ +TS
Sbjct: 678 KGSIRNIERIPQEIRDLYKTVWEMSQRDIIDMAVDRGAFIDHSQSLNIFIARPNYGNITS 737
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
+HF W +GLKTGMYYLR+R A DA++FTVD + K+
Sbjct: 738 MHFYGWQKGLKTGMYYLRTRPAVDAVQFTVDKTRLKD 774
>gi|449277321|gb|EMC85547.1| Ribonucleoside-diphosphate reductase large subunit [Columba livia]
Length = 623
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/642 (67%), Positives = 520/642 (80%), Gaps = 19/642 (2%)
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
MLMRV++GIHK DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+CMKDDSIE
Sbjct: 1 MLMRVAVGIHKHDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIE 60
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIY+TLK CA+ISKSAGGIG++V IRATGSYI GTNG+SNG+VPMLRV+N+TARYVDQG
Sbjct: 61 GIYDTLKHCALISKSAGGIGLAVSCIRATGSYIAGTNGSSNGLVPMLRVYNNTARYVDQG 120
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WS
Sbjct: 121 GNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWS 180
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
L CPNE GL + WG EFEKLY YER+G+ ++VV+AQ LW+ I+ SQ ETGTPYML+KD
Sbjct: 181 LMCPNECPGLDEVWGDEFEKLYESYERQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKD 240
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLASIAL +V
Sbjct: 241 ACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------- 286
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
+ +DF+KLAEVT ++ NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD
Sbjct: 287 -----TSEHTYDFKKLAEVTKVIVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLAD 341
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
FIL+ FESPEAQ+LN+ IFETIYY AL+ S E+A ++GPYETY SPVSKGILQ DM
Sbjct: 342 AFILMRYPFESPEAQRLNQHIFETIYYGALEASCELAREQGPYETYEGSPVSKGILQYDM 401
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WNV PSD WDW L++ I+K GVRNSLL++PMPTAST+QILGNNE EPYTSNIY+RRVL
Sbjct: 402 WNVTPSDLWDWKALKEKIAKYGVRNSLLLSPMPTASTAQILGNNESIEPYTSNIYTRRVL 461
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
SGEF VVN HLL DLTE G+W+ +KN+II +GS+Q IPEIPE+LK +YKTVWEI Q T
Sbjct: 462 SGEFQVVNPHLLKDLTERGLWNEEMKNQIIAHNGSIQNIPEIPEDLKQLYKTVWEISQKT 521
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++ MA DRG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR++ AA+ I+F
Sbjct: 522 ILKMAADRGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQF 581
Query: 770 TVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
T++ +E+ + + + E A +VCSL NREEC+ CGS
Sbjct: 582 TLNKEKLREREKANKEEEEKERNKAAMVCSLENREECLMCGS 623
>gi|343474739|emb|CCD13686.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 842
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/852 (53%), Positives = 590/852 (69%), Gaps = 66/852 (7%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V+ R G EA +K+ R++ L G+ + + + V G+Y+ + T +LD+L AE
Sbjct: 14 VINRSGEPEAFDINKLRERVEPLLDGIDLRYVNVTSLIDTVKCGIYENIKTDRLDQLLAE 73
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY L R+AV+ LHK T+ E ++MY H + SG APL+++ ++
Sbjct: 74 TAAYSVTKHPDYGLLGGRLAVTALHKTTQGRVLEAFREMYRHNSLTSGRWAPLVSEALWR 133
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ-----GKVVERPQHMLMRVSIG 177
++ N L++ I Y RD ++YFGFKTLE+SYLL+V ++VERPQ M +RV++G
Sbjct: 134 VVEANHEELENIIDYSRDLRFEYFGFKTLEKSYLLRVDVGHGATRIVERPQLMFLRVALG 193
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH +D++ +TY MS +FTHA+PTLFNAGTP PQ+SSCFL+ M++DSIEGIY+TLK+
Sbjct: 194 IHGNDLERVKETYDHMSLGYFTHATPTLFNAGTPTPQMSSCFLLAMREDSIEGIYDTLKQ 253
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIGV VHNIR GSYI GTNGTSNG+VPMLRV N+TARYVDQGGGKRKGAF
Sbjct: 254 CAIISKSAGGIGVHVHNIRCAGSYIAGTNGTSNGLVPMLRVLNNTARYVDQGGGKRKGAF 313
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWHADI FL LKKN GK++ RARDLFY LW+PDLFMERV+ +W+L PN A
Sbjct: 314 AVYLEPWHADILGFLLLKKNTGKDDLRARDLFYGLWIPDLFMERVRQKEKWTLMDPNTAR 373
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GL+DC+G EF+ LY YE+EG+ K + A +LWF IL SQ+ETG P+ML+KD CN KSNQ
Sbjct: 374 GLSDCYGDEFKDLYERYEKEGRGVKTIAAHDLWFAILESQVETGGPFMLYKDACNCKSNQ 433
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTS E AVCNLASIALPR + +
Sbjct: 434 KNLGTIKCSNLCTEILEYTSKDEIAVCNLASIALPRCIEDGK------------------ 475
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
F +KL +T IVT NLNK+ID+NYYP+E A+RSN+R+RP+GIGVQGLADTF LL +
Sbjct: 476 --FSHKKLRNITKIVTRNLNKVIDLNYYPLEEAKRSNMRNRPVGIGVQGLADTFALLSLP 533
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN------ 591
F S A++LN+ IFE IYY A++TS E+AA++G YET+ SP S+G+LQ D+W+
Sbjct: 534 FASIRAKRLNRRIFENIYYAAVETSVELAAEQGKYETFDKSPASEGLLQFDLWDRYVRSE 593
Query: 592 -----------------------------VIPSD--RWDWGVLRDMISKNGVRNSLLVAP 620
V+ D R DW L+ + G+RNSLL+AP
Sbjct: 594 AEVERYKRELEEEDRIDERNRTGGEEKDRVVDDDYERLDWEGLKKRVMSVGMRNSLLIAP 653
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
MPTASTSQILGNNEC EP+TSNIY RRVLSGEF VVNK+L+ L E G+W+ ++NKII
Sbjct: 654 MPTASTSQILGNNECIEPFTSNIYVRRVLSGEFPVVNKYLVRALIEKGLWNDEMRNKIIT 713
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
+GS+ I EIPE+++ +YK VWEI+Q L+DMAV RG Y+DQSQSLN+ +++P +++
Sbjct: 714 YNGSISSIKEIPEDIRELYKVVWEIRQRDLIDMAVARGRYVDQSQSLNLFLEKPTSTQLS 773
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSL 800
S+HF TW RGLKTGMYYLRS+ AADAIKFTVD KEK + + + Q SL
Sbjct: 774 SMHFYTWERGLKTGMYYLRSKPAADAIKFTVDP---KEKKKLEDGKRAQQEPQEQGGPSL 830
Query: 801 T-NREECMACGS 811
EC+ CGS
Sbjct: 831 RYGSGECLNCGS 842
>gi|342185899|emb|CCC95384.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 842
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/852 (53%), Positives = 589/852 (69%), Gaps = 66/852 (7%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V+ R G EA +K+ R++ L G+ + + + V G+Y+ + T +LD+L AE
Sbjct: 14 VINRSGEPEAFDINKLRERVEPLLDGIDLRYVNVTSLIDTVKCGIYENIKTDRLDQLLAE 73
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T HPDY L R+AV+ LHK T+ E ++MY H + SG APL+++ ++
Sbjct: 74 TAAYSVTKHPDYGLLGGRLAVTALHKTTQGRVLEAFREMYRHNSLTSGRWAPLVSETLWR 133
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ-----GKVVERPQHMLMRVSIG 177
++ N L++ I Y RD ++YFGFKTLE+SYLL+V ++VERPQ M +RV++G
Sbjct: 134 VVEANHEELENIIDYSRDLRFEYFGFKTLEKSYLLRVDVGHGATRIVERPQLMFLRVALG 193
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKE 237
IH +D++ +TY MS +FTHA+PTLFNAGTP PQ+SSCFL+ M++DSIEGIY+TLK+
Sbjct: 194 IHGNDLERVKETYDHMSLGYFTHATPTLFNAGTPTPQMSSCFLLAMREDSIEGIYDTLKQ 253
Query: 238 CAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIGV VHNIR GSYI GTNGTSNG+VPMLRV N+TARYVDQGGGKRKGAF
Sbjct: 254 CAIISKSAGGIGVHVHNIRCAGSYIAGTNGTSNGLVPMLRVLNNTARYVDQGGGKRKGAF 313
Query: 298 AVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
AVYLEPWHADI FL LKKN GK++ RARDLFY LW+PDLFMERV+ +W+L PN A
Sbjct: 314 AVYLEPWHADILGFLLLKKNTGKDDLRARDLFYGLWIPDLFMERVRQKEKWTLMDPNTAR 373
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GL+DC+G EF+ LY YE EG+ K + A +LWF IL SQ+ETG P+ML+KD CN KSNQ
Sbjct: 374 GLSDCYGDEFKDLYERYEMEGRGVKTIAAHDLWFAILESQVETGGPFMLYKDACNCKSNQ 433
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
+NLGTIK SNLCTEI+EYTS E AVCNLASIALPR + +
Sbjct: 434 KNLGTIKCSNLCTEILEYTSKDEIAVCNLASIALPRCIEDGK------------------ 475
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
F +KL +T IVT NLNK+ID+NYYP+E A+RSN+R+RP+GIGVQGLADTF LL +
Sbjct: 476 --FSHKKLRNITKIVTRNLNKVIDLNYYPLEEAKRSNMRNRPVGIGVQGLADTFALLSLP 533
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN------ 591
F S A++LN+ IFE IYY A++TS E+AA++G YET+ SP S+G+LQ D+W+
Sbjct: 534 FASIRAKRLNRRIFENIYYAAVETSVELAAEQGKYETFDKSPASEGLLQFDLWDRFVRSK 593
Query: 592 -----------------------------VIPSD--RWDWGVLRDMISKNGVRNSLLVAP 620
V+ D R DW L+ + G+RNSLL+AP
Sbjct: 594 AEVERYKRELEEEDQIDERNRTGGEEKDRVVDDDYERLDWEGLKKRVMSVGMRNSLLIAP 653
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
MPTASTSQILGNNEC EP+TSNIY RRVLSGEF VVNK+L+ L E G+W+ ++NKII
Sbjct: 654 MPTASTSQILGNNECIEPFTSNIYVRRVLSGEFPVVNKYLVRALIEKGLWNDEMRNKIIT 713
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
+GS+ I EIPE+++ +YK VWEI+Q L+DMAV RG Y+DQSQSLN+ +++P +++
Sbjct: 714 YNGSISSIKEIPEDIRELYKVVWEIRQRDLIDMAVARGRYVDQSQSLNLFLEKPTSTQLS 773
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSL 800
S+HF TW RGLKTGMYYLRS+ AADAIKFTVD KEK + + + Q SL
Sbjct: 774 SMHFYTWERGLKTGMYYLRSKPAADAIKFTVDP---KEKKKLEDGKRAQQEPQEQGGPSL 830
Query: 801 T-NREECMACGS 811
EC+ CGS
Sbjct: 831 RYGSGECLNCGS 842
>gi|322792463|gb|EFZ16447.1| hypothetical protein SINV_80023 [Solenopsis invicta]
Length = 802
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/821 (56%), Positives = 581/821 (70%), Gaps = 69/821 (8%)
Query: 39 VSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI 98
V+ +V G+Y GVTT LD LAAETAA M TNHPDYA LAARI VSNLHK TKKSFSE +
Sbjct: 3 VAIQVIRGLYSGVTTVILDNLAAETAATMATNHPDYAILAARIDVSNLHKETKKSFSEVM 62
Query: 99 KDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
D+Y N + P+I++ Y II NA LDS IIYDRDF Y+Y GFKTLERSYLLK
Sbjct: 63 HDLYYARNSITNQHTPIISEHYYNIIKNNADRLDSAIIYDRDFSYNYIGFKTLERSYLLK 122
Query: 159 VQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSS- 217
+ GK+VERPQHMLMRV++GIH++DID I+TY+ +S+R+FTHASPTLFNA T Q+SS
Sbjct: 123 INGKIVERPQHMLMRVAVGIHENDIDKVIETYNYLSERYFTHASPTLFNACTNNQQMSSL 182
Query: 218 --------CFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTS 269
CFL+ +++DSI+GIY LK+C++ISK AGGIG++VH IRA + TN T+
Sbjct: 183 RLISEALLCFLLTLENDSIKGIYSMLKKCSLISKYAGGIGINVHCIRAKSA--EDTN-TT 239
Query: 270 NGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLF 329
NG+V +L+++N+ A YVDQGG KR GAFA+YLEPWHADIFEFL LK+N G RARDLF
Sbjct: 240 NGLVSVLKLYNEIAVYVDQGGNKRPGAFAIYLEPWHADIFEFLELKRNIGDGNMRARDLF 299
Query: 330 YALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNL 389
Y LW+PDLFMERV + WSL CP E+ GLAD WG EF++LY YE+EG+ +K V+A+ +
Sbjct: 300 YGLWIPDLFMERVYNDEMWSLMCPYESPGLADVWGDEFKELYIRYEKEGRYRKQVEARTV 359
Query: 390 WFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASI 449
W IL SQ ETGTPYML+KD CNRKSN Q+LGTIK SNLCTEI+EY+ P E AVCNLASI
Sbjct: 360 WLAILRSQGETGTPYMLYKDHCNRKSNHQHLGTIKCSNLCTEIVEYSGPGEVAVCNLASI 419
Query: 450 ALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVET 509
A+ FV + + FDF+KL V IVT NL+K+IDVN+YP+
Sbjct: 420 AVNMFV------------------NTDTKTFDFDKLKTVAKIVTRNLDKVIDVNFYPIPE 461
Query: 510 ARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKE 569
+ SN +HRPIGIG+QGLAD F+L+ +F+S EA++LN IFET+YY AL+ S E+AA++
Sbjct: 462 TKASNQKHRPIGIGIQGLADAFLLMRYSFDSKEAKELNIKIFETLYYGALECSCELAAEK 521
Query: 570 GPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQI 629
G YETY SPVSKGILQ DMWNV P+D W+W L+ I+++GVRNSLL+APMPTAST+QI
Sbjct: 522 GTYETYQGSPVSKGILQYDMWNVKPTDLWNWDELKAKIAEHGVRNSLLIAPMPTASTAQI 581
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIP 689
LGNNE EPYTSNIY RRVLSGEFV+VN HLL DLT G+W ++N+I+ + GSVQ I
Sbjct: 582 LGNNESIEPYTSNIYVRRVLSGEFVIVNPHLLRDLTARGLWDEDMQNEILANFGSVQNIE 641
Query: 690 EIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSR 749
IP++LKM+YKTVWEI Q +++MA DRG +IDQSQSLN+H+ P +K+TS+HF W
Sbjct: 642 RIPDDLKMLYKTVWEIPQKVILEMAADRGAFIDQSQSLNVHIGDPTTEKLTSMHFFGWRS 701
Query: 750 GLKTGMYYLRSRAAADAIKFTVDTSVFKEK---------------------------PEK 782
GLKTGMYYLR++ AA+ I+FTVD S + + P K
Sbjct: 702 GLKTGMYYLRTKPAANPIQFTVDQSKLQSRDSISSASNTSTSTINSTPINSTPIHQSPNK 761
Query: 783 PELVVDDETKMAQ------------VVCSLTNREECMACGS 811
DD K Q + CS N+E C AC S
Sbjct: 762 DVNGDDDAEKRKQLSQQASKNLEAMLACSRKNKEACTACSS 802
>gi|38683667|gb|AAR26844.1| FirrV-1-A20 [Feldmannia irregularis virus a]
Length = 766
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/773 (56%), Positives = 565/773 (73%), Gaps = 17/773 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KR G +E + FDK+TAR++KL+ GL ++ DP+ V+ KV G+Y GVTT +LD LA
Sbjct: 1 MYVIKRSGLRENIKFDKVTARVRKLTDGLDLKYVDPIEVTMKVNQGIYSGVTTRELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A M+ NHPDY+ LAARI VSNL+K T+ +S +K + ++ N +G APL++ ++
Sbjct: 61 AETCAYMSINHPDYSVLAARICVSNLYKETESCYSTLVKQLRDYVNPETGEWAPLVSAEL 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ +N + E + YDYF +KTLE+SYLLK+ GK+ ERP +LMRV+IGIH
Sbjct: 121 VKVVTENREQV-QEALDGFAETYDYFAYKTLEKSYLLKMNGKIAERPHQLLMRVAIGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI SA++TY M + +T A+PTLFNAGTP PQ+SSCFL+ KDDSI GI++TLK CA
Sbjct: 180 DDITSALQTYRDMGSKRYTMATPTLFNAGTPTPQMSSCFLMTCKDDSISGIFDTLKNCAC 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGG+GVS+H++R GSYIRGTNG SNG+VPMLRVFN+TARYVDQGGG+RKG+ A+Y
Sbjct: 240 ISKYAGGLGVSIHDVRGRGSYIRGTNGVSNGLVPMLRVFNNTARYVDQGGGRRKGSIAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI FL+LKKN G E RARDLFYALWVPDLFM RV+ N +WSL CPNE GLA
Sbjct: 300 LEPWHADIESFLDLKKNQGNELERARDLFYALWVPDLFMRRVEKNQKWSLMCPNECPGLA 359
Query: 361 DCWGAEFEKLYTHYERE-GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
+ WG EF+ LY YE K + + A+ LW IL Q+ETGTPY+L+KD+ N KSNQQ+
Sbjct: 360 NVWGKEFDALYEKYEASPNKVRATLDARKLWNHILDVQVETGTPYILYKDSVNAKSNQQH 419
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LG IKSSNLCTEI+EYTSP E AVCNLASI L +R HP + +
Sbjct: 420 LGVIKSSNLCTEIVEYTSPDEIAVCNLASINLSSVIR--------HPY-------TAEAY 464
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
D+ L + + NLN++ID NYYPV AR SN++HRP+GIGVQG AD I+L ++
Sbjct: 465 VDYTALVGLAGSLVRNLNRVIDKNYYPVPEARASNMKHRPVGIGVQGFADALIMLRKPYD 524
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
SPEA +N ++FE+IYY ALK S + A G +E++ SP+S+G Q D+W V P+D +D
Sbjct: 525 SPEAAAINVNLFESIYYGALKASLQEAQLYGRHESFPGSPLSQGRFQFDLWGVQPTDTYD 584
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I ++GVRNSLL APMPTAST+QILGNNE FEP+T+N+Y+RRVL+GEF VVNKH
Sbjct: 585 WNTLRASIVEHGVRNSLLCAPMPTASTAQILGNNESFEPFTTNVYNRRVLAGEFPVVNKH 644
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
LL DLT + +W +KN+++ +GSVQ I IP +K +YKTVWEI Q ++D A DRG
Sbjct: 645 LLKDLTSLDLWDDEMKNQLLLHNGSVQNIARIPRWVKDLYKTVWEIPQRVILDHAADRGP 704
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
Y+ QSQS+NIHM +P K+TS+ F W RGLKTGMYYLR+R AD+I+F VD
Sbjct: 705 YVCQSQSMNIHMAEPTRAKLTSMLFHGWKRGLKTGMYYLRTRPRADSIQFGVD 757
>gi|314055218|ref|YP_004063556.1| ribonucleoside-diphosphate reductase, alpha subunit [Ostreococcus
tauri virus 2]
gi|313575109|emb|CBI70122.1| ribonucleoside-diphosphate reductase, alpha subunit [Ostreococcus
tauri virus 2]
gi|388548669|gb|AFK65871.1| ribonucleoside diphosphate reductase [Ostreococcus lucimarinus
virus OlV6]
Length = 747
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/772 (56%), Positives = 568/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR GR E + FD IT R+K L+YGLS E+CD V+Q+V + +Y G+T ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-ENCDSSKVAQQVASSLYDGITVQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE + T+ PDY LA RI SN+ K +F +K + KA ++ +++
Sbjct: 60 AEVCIGLITSDPDYEILATRITASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
I A + +I RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRV+IGIH
Sbjct: 111 ARI----AGRVRDDIDTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DIDS ++TY MSQ F HA+PTLFNAGTPRPQ+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 EDIDSVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI EFL L+ N G EE R RDLF +LW+PDLFM+RV+ GQWSLFCP++A GL+
Sbjct: 286 LEPWHADIMEFLELRLNQGDEEARCRDLFSSLWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D G EFE LYT YE EG+A +V A ++W IL SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 346 DAVGEEFEALYTKYEAEGRANAIVPAADVWKAILKSQTETGTPYMLYKDACNKKSNQKNL 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYT ETAVCNLASIALP++V E+ R F
Sbjct: 406 GTIKSSNLCTEILEYTDKDETAVCNLASIALPKYVNEE------------------TRTF 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+EKL E+T IVT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL AF+S
Sbjct: 448 DYEKLHEITKIVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRYAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+++N IFET+Y+ +L+ S E+A +G YET+ SP S+G+LQ DMW +DW
Sbjct: 508 DEAKEMNARIFETMYHASLEASCELAEAQGSYETFEGSPTSQGVLQFDMWEGETKLNYDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VL++ I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFV+VNKHL
Sbjct: 568 DVLKERIKEKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
++DL ++G+WS +K+ ++ GS+Q I +IP+++K +Y+TVWEIK ++DMA RG +
Sbjct: 628 VNDLKKIGLWSKDMKDLMVKAGGSIQNISDIPDDIKNLYRTVWEIKMKDVIDMAAQRGRF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS+N+ M+ P K++S+H W +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|163955126|ref|YP_001648230.1| hypothetical protein OsV5_153r [Ostreococcus virus OsV5]
gi|163638575|gb|ABY27934.1| hypothetical protein OsV5_153r [Ostreococcus virus OsV5]
Length = 747
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/772 (56%), Positives = 567/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR GR E + FD IT R+K L+YGLS ++CD V+Q+V + +Y G+ ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-KNCDSSKVAQQVASSLYDGIAAQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE M T+ PDY LA RI SN+ K +F +K + KA ++ +++
Sbjct: 60 AEVCVGMITSDPDYEILATRIVASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
I ++ + +I+ RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRVSIGIH
Sbjct: 111 ARIAVR----VRDDIVTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVSIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI + ++TY MSQ F HA+PTLFNAGTPRPQ+SSCFL+ K DSI+GIY +L ECA
Sbjct: 167 EDIPAVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKGDSIDGIYGSLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL L+ N G EE R RDLF ALW+PDLFM+RV+ GQWSLFCP++A GL+
Sbjct: 286 LEPWHADIMDFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ G EFE LYT YE EG+A V A ++W IL SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 346 EAVGEEFEALYTKYEEEGRANATVPAADVWKAILKSQTETGTPYMLYKDACNTKSNQKNL 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT ET+VCNLASIALP++V E+ R F
Sbjct: 406 GTIKSSNLCTEIIEYTDKDETSVCNLASIALPKYVNEE------------------TRSF 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+EKL E+T +VT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL +AF+S
Sbjct: 448 DYEKLHEITKVVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRLAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ +N IFET+Y+ AL+ SSE+A EGPYET+ SP S+GILQ DMW +DW
Sbjct: 508 DEAKAMNARIFETMYHAALEASSELAEVEGPYETFEGSPASQGILQFDMWQGETKLNYDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFVVVNKHL
Sbjct: 568 DALKERIREKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL ++G+WS +K+ ++ GS+Q I +IP+++K +Y+TVWEIK ++DMA DRG +
Sbjct: 628 VEDLKKIGLWSKDMKDLMVKAGGSIQNIVDIPDDIKNLYRTVWEIKMKDVIDMAADRGRF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS+N+ M+ P K++S+H W +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTLSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|260666002|ref|YP_003212956.1| hypothetical protein H665_p133 [Ostreococcus tauri virus 1]
gi|260161020|emb|CAY39721.1| hypothetical protein OTV1_133 [Ostreococcus tauri virus 1]
Length = 747
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/772 (56%), Positives = 565/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR GR E + FD IT R+K L+YGLS ++CD V+Q+V + +Y G+ ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-KNCDSSKVAQQVASSLYDGIAAQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE M T+ PDY LA RI SN+ K +F +K + KA ++ +++
Sbjct: 60 AEVCVGMITSDPDYEILATRIVASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
I A + +I+ RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRVSIGIH
Sbjct: 111 ARI----AGRVRDDIVTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVSIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI S ++TY MSQ F HA+PTLFNAGTPRPQ+SSCFL+ K DSI+GIY +L ECA
Sbjct: 167 EDIPSVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKGDSIDGIYGSLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL L+ N G EE R RDLF ALW+PDLFM+RV+ GQWSLFCP++A GL+
Sbjct: 286 LEPWHADIMDFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ G EFE LYT YE EG+A V A ++W IL SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 346 EAVGEEFEALYTKYEEEGRANATVPAADVWKAILKSQTETGTPYMLYKDACNTKSNQKNL 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEIIEYT ET+VCNLASIALP++V E+ R F
Sbjct: 406 GTIKSSNLCTEIIEYTDKDETSVCNLASIALPKYVNEE------------------TRSF 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+EKL E+T +VT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL +AF+S
Sbjct: 448 DYEKLHEITKVVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRLAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ +N IFET+Y+ AL+ SSE+A EGPYET+ SP S+GILQ DMW +DW
Sbjct: 508 DEAKAMNARIFETMYHAALEASSELAEVEGPYETFEGSPASQGILQFDMWEGETKLNYDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFVVVNKHL
Sbjct: 568 DALKERIRGVGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL ++G+WS +K+ ++ GS+Q I +IP+++K +Y+TVWEIK ++DMA DRG +
Sbjct: 628 VEDLKKIGLWSKDMKDLMVKAGGSIQNIVDIPDDIKNLYRTVWEIKMKDVIDMAADRGRF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS+N+ M+ P K++S+H W +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTLSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|388548927|gb|AFK66128.1| ribonucleoside diphosphate reductase [Ostreococcus lucimarinus
virus OlV3]
Length = 747
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/772 (56%), Positives = 568/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR GR E + FD IT R+K L+YGLS E+CD V+Q+V + +Y G+T ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-ENCDSSKVAQQVASSLYDGITVQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE + T+ PDY LA RI SN+ K +F ++K + KA ++ +++
Sbjct: 60 AEVCIGLITSDPDYEILATRITASNIQKVCPNNFHISMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
I A + +I RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRV+IGIH
Sbjct: 111 ARI----AGRVRDDIDTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DIDS ++TY MSQ F HA+PTLFNAGTPRPQ+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 EDIDSVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI EFL L+ N G EE R RDLF +LW+PDLFM+RV+ GQWSLFCP++A GL+
Sbjct: 286 LEPWHADIMEFLELRLNQGDEEARCRDLFSSLWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D G EFE LYT YE EG+A +V A ++W IL SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 346 DAVGEEFEALYTKYEAEGRANAIVPAADVWKAILKSQTETGTPYMLYKDACNKKSNQKNL 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYT ETAVCNLASIALP++V E+ R F
Sbjct: 406 GTIKSSNLCTEILEYTDKDETAVCNLASIALPKYVNEE------------------TRTF 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+EKL E+T IVT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL AF+S
Sbjct: 448 DYEKLHEITKIVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRYAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+++N IFET+Y+ +L+ S E+A +G YET+ SP S+G+LQ DMW +DW
Sbjct: 508 DEAKEMNARIFETMYHASLEASCELAEAQGSYETFEGSPTSQGVLQFDMWEGETKLHYDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFV+VNKHL
Sbjct: 568 DALKERIKEKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
++DL ++G+WS +K+ ++ GS+Q I +IP+++K +Y+TVWEIK ++DMA RG +
Sbjct: 628 VNDLKKIGLWSKDMKDLMVKAGGSIQNISDIPDDIKNLYRTVWEIKMKDVIDMAAQRGRF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS+N+ M+ P K++S+H W +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|228861716|ref|YP_002854736.1| Rr1 [Euproctis pseudoconspersa nucleopolyhedrovirus]
gi|226425164|gb|ACO53576.1| Rr1 [Euproctis pseudoconspersa nucleopolyhedrovirus]
Length = 769
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/788 (54%), Positives = 572/788 (72%), Gaps = 30/788 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV KR+G++EA+H DKIT++L++LSY L++E+ DP ++ +V +Y GV+T +LD A
Sbjct: 8 LYVTKRNGKKEALHLDKITSKLQRLSYNLNSEYIDPASITLQVVKTIYPGVSTEELDMHA 67
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A A M H DYA LA RI V NLHKN + SF ++ ++ H L++D++
Sbjct: 68 ARETANMAYVHHDYALLAGRIMVDNLHKNVEASFERVVERLHRH---------NLVSDEL 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
I+ NA L+S I + D++Y YFG+KTLE YL K++ KV ER QHMLMRV+IG+H
Sbjct: 119 LSIVQDNAITLESRINHSLDYEYKYFGYKTLENGYLKKIEEKVAERIQHMLMRVAIGVHG 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A +TY +MSQ++FTHASPTLF AGT PQLSSCFL+ +++DSI GIYETL++CA+
Sbjct: 179 RDIENATETYDLMSQKFFTHASPTLFAAGTKLPQLSSCFLLTLREDSITGIYETLRDCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIGV+VH++R GS IR T+G ++G+ MLRV+N+ R+VDQGG KRKGA A+Y
Sbjct: 239 ISKFGGGIGVNVHDVRGRGSRIRSTDGIASGLESMLRVYNNAVRHVDQGG-KRKGAMAIY 297
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+++FLNLK+N G EE +ARDL YALWVPDLFM RV+ +G WSL CP+ GL+
Sbjct: 298 LEPWHVDVYDFLNLKRNMGAEEKKARDLLYALWVPDLFMRRVKDDGVWSLMCPDRCPGLS 357
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +F++LY YEREGK V A++L+ I+ +Q+ETGTPYML+KD CNRK+NQ NL
Sbjct: 358 DVYGNQFDELYAQYEREGKQVSQVPARDLFKFIIETQVETGTPYMLYKDACNRKTNQSNL 417
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC+EIIEY+ + AVCNLASI + R V +N F
Sbjct: 418 GTIKCSNLCSEIIEYSDADQVAVCNLASICVNRCV--------------------ENGAF 457
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+ L +T V +NLNKIIDVN+YP+E AR SNL+HRP+G+G+QGLAD F++L M +ES
Sbjct: 458 NFQTLKRITKTVVKNLNKIIDVNFYPLEEARLSNLKHRPVGVGIQGLADAFVMLRMPYES 517
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN I ETIYY AL+ S E+A G YE+Y SP S+GILQ DMWN P++ WDW
Sbjct: 518 DEAKLLNTQIAETIYYGALEASCELAKIHGAYESYAGSPASRGILQYDMWNATPTNLWDW 577
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VL+ IS +G+RNSLLVA MPTA+T+QILGNNE FEP+T+N+Y RRVL+G+F V+N HL
Sbjct: 578 SVLKQRISTHGLRNSLLVAYMPTATTAQILGNNESFEPFTNNLYVRRVLAGDFQVINHHL 637
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + ++ ++N+II GSVQ+I IPE +K +YKTVWE+K L++MAVDRG Y
Sbjct: 638 VDDLVALNLYDENMRNEIIAAGGSVQRIASIPEHVKQLYKTVWEMKNKRLIEMAVDRGAY 697
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
DQSQS N+ + +P + ++TS+H WS GLKTGMYYLR++ AADAI+FTVD S + +
Sbjct: 698 TDQSQSFNVFVAEPTYARMTSIHMHAWSSGLKTGMYYLRTKPAADAIQFTVDKSKLRRRQ 757
Query: 781 EKPELVVD 788
+ + D
Sbjct: 758 KARNVNCD 765
>gi|62084010|emb|CAI72629.1| ribonucleotide reductase, large subunit [Euproctis pseudoconspersa
nucleopolyhedrovirus]
Length = 769
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/788 (54%), Positives = 572/788 (72%), Gaps = 30/788 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV KR+G++EA+H DKIT++L++LSY L++E+ DP ++ +V +Y GV+T +LD A
Sbjct: 8 LYVTKRNGKKEALHLDKITSKLQRLSYNLNSEYIDPASITLQVVKTIYPGVSTEELDMHA 67
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A A M H DYA LA RI V NLHKN + SF ++ ++ H L++D++
Sbjct: 68 ARETANMAYVHHDYALLAGRIMVDNLHKNVEASFERVVERLHRH---------NLVSDEL 118
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
I+ NA L+S I + D++Y YFG+KTLE YL K++ K+ ER QHMLMRV+IG+H
Sbjct: 119 LSIVQDNAITLESRINHSLDYEYKYFGYKTLENGYLKKIEEKIAERIQHMLMRVAIGVHG 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI++A +TY +MSQ++FTHASPTLF AGT PQLSSCFL+ +++DSI GIYETL++CA+
Sbjct: 179 RDIENATETYDLMSQKFFTHASPTLFAAGTKLPQLSSCFLLTLREDSITGIYETLRDCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIGV+VH++R GS IR T+G ++G+ MLRV+N+ R+VDQGG KRKGA A+Y
Sbjct: 239 ISKFGGGIGVNVHDVRGRGSRIRSTDGIASGLESMLRVYNNAVRHVDQGG-KRKGAMAIY 297
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH D+++FLNLK+N G EE +ARDL YALWVPDLFM RV+ +G WSL CP+ GL+
Sbjct: 298 LEPWHVDVYDFLNLKRNMGAEEKKARDLLYALWVPDLFMRRVKDDGVWSLMCPDRCPGLS 357
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +F++LY YEREGK V A++L+ I+ +Q+ETGTPYML+KD CNRK+NQ NL
Sbjct: 358 DVYGNQFDELYAQYEREGKQVSQVPARDLFKFIIETQVETGTPYMLYKDACNRKTNQSNL 417
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC+EIIEY+ + AVCNLASI + R V +N F
Sbjct: 418 GTIKCSNLCSEIIEYSDADQVAVCNLASICVNRCV--------------------ENGAF 457
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+F+ L +T V +NLNKIIDVN+YP+E AR SNL+HRP+G+G+QGLAD F++L M +ES
Sbjct: 458 NFQTLKRITKTVVKNLNKIIDVNFYPLEEARLSNLKHRPVGVGIQGLADAFVMLRMPYES 517
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ LN I ETIYY AL+ S E+A G YE+Y SP S+GILQ DMWN P++ WDW
Sbjct: 518 DEAKLLNTQIAETIYYGALEASCELAKIHGAYESYAGSPASRGILQYDMWNATPTNLWDW 577
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
VL+ IS +G+RNSLLVA MPTA+T+QILGNNE FEP+T+N+Y RRVL+G+F V+N HL
Sbjct: 578 SVLKQRISTHGLRNSLLVAYMPTATTAQILGNNESFEPFTNNLYVRRVLAGDFQVINHHL 637
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + ++ ++N+II GSVQ+I IPE +K +YKTVWE+K L++MAVDRG Y
Sbjct: 638 VDDLVALNLYDENMRNEIIAAGGSVQRIASIPEHVKQLYKTVWEMKNKRLIEMAVDRGAY 697
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
DQSQS N+ + +P + ++TS+H WS GLKTGMYYLR++ AADAI+FTVD S + +
Sbjct: 698 TDQSQSFNVFVAEPTYARMTSIHMHAWSSGLKTGMYYLRTKPAADAIQFTVDKSKLRRRQ 757
Query: 781 EKPELVVD 788
+ + D
Sbjct: 758 KARNVNCD 765
>gi|313768342|ref|YP_004062022.1| hypothetical protein MpV1_139c [Micromonas sp. RCC1109 virus MpV1]
gi|312599038|gb|ADQ91062.1| hypothetical protein MpV1_139c [Micromonas sp. RCC1109 virus MpV1]
Length = 749
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/774 (56%), Positives = 564/774 (72%), Gaps = 35/774 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR GR E + FD +T R+K L+YGLS + CD V+Q+V + +Y +TT ++D L+
Sbjct: 1 MRVIKRSGRIEDMKFDNVTNRIKNLTYGLS-DKCDSSKVAQQVFSSMYDNITTQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE M T+ PDY +LA RI SN+ K +F H R KA +I D++
Sbjct: 60 AEICVGMITSDPDYETLATRIVASNIQKVCPNNF---------HLAMRKLQKAGIITDEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E+ A + I DRDFD+ YFG KTLE+SYL +V GK++E PQ+M MRV+IGIH
Sbjct: 111 VEV----AQQVKEHIKSDRDFDFGYFGLKTLEKSYLQRVDGKLIETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+ SA+ TY+ MSQ F HA+PTLFNAGTPRPQ+SSCFL+ K DSI+GIY TL ECA
Sbjct: 167 KDVPSALDTYNKMSQGLFIHATPTLFNAGTPRPQMSSCFLIANKADSIDGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H+IRA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDIRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI +FL L+ N G EE R RDLF A+W+PDLFM+RV+ G WSLFCP++A GL+
Sbjct: 286 LEPWHSDIMDFLELRLNQGDEEARCRDLFSAMWIPDLFMKRVEEGGNWSLFCPDKAKGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LYT YE EG A V A ++W IL SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 346 DVYGQEFEDLYTKYEEEGLANATVPAADVWKAILKSQTETGTPYMLYKDACNSKSNQKNL 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLCTEI+EYT ET+VCNLASIALP++V + + + F
Sbjct: 406 GVIKSSNLCTEILEYTDKDETSVCNLASIALPKYVNK------------------ETKTF 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D++KL E+T VT+NLN++ID N+YPVETARRSN++HRPIG+GVQGLAD FIL G+ F+
Sbjct: 448 DYDKLHEITKTVTKNLNRVIDRNFYPVETARRSNMKHRPIGLGVQGLADVFILCGLPFDC 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN--VIPSDRW 598
E++ +N IFET+Y+ AL+ SSE+A EG YE++ SP ++G+LQPDMW+ S R+
Sbjct: 508 EESRLMNAHIFETMYHAALEASSELAEVEGSYESFKGSPAAEGVLQPDMWDGETKFSGRY 567
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +R+ + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFVVVNK
Sbjct: 568 DWDAMRERVKTKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 627
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
HL+ DL ++G+WS +K+ ++ GS+Q I +IP+++K +YKTVWEI Q ++DMA DRG
Sbjct: 628 HLVDDLKKVGLWSKEMKDLMVKAGGSIQNIVDIPDDIKNLYKTVWEISQKCIIDMAADRG 687
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+IDQSQS+N+ M+ P K++S+H W GLKTGMYYLRS+A A I+F+++
Sbjct: 688 RFIDQSQSMNLFMESPTLSKLSSMHMYAWKAGLKTGMYYLRSKAKARPIQFSLE 741
>gi|150864273|ref|XP_001383025.2| ribonucleoside-diphosphate reductase alpha subunit [Scheffersomyces
stipitis CBS 6054]
gi|149385529|gb|ABN64996.2| ribonucleoside-diphosphate reductase alpha subunit [Scheffersomyces
stipitis CBS 6054]
Length = 891
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/774 (56%), Positives = 570/774 (73%), Gaps = 20/774 (2%)
Query: 9 RQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMT 68
++E +++ L KL+ L +H D + V G+ VT +L L +ET A+ T
Sbjct: 34 KREDFDIKRLSRFLLKLTTNLDVKHLDLDSIVSTVEVGLPAKVTLDELYGLVSETLASRT 93
Query: 69 TNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHY-----NERSGLKAP----LIADD 119
HPDYA LA R+A + K+ SFS + ++NH N +G K ++++
Sbjct: 94 IYHPDYALLAGRVAARRIQKHVSTSFSGAVIKLWNHRSSVTNNRSNGNKTSRTYSIVSES 153
Query: 120 IYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH 179
+Y+I+M++ DS I DRDFD YF KTLERSYLLK+ ++ E PQ+M +RV+IGIH
Sbjct: 154 LYKIVMQHRHFFDSLIEKDRDFDLTYFAIKTLERSYLLKINDEMAETPQYMFLRVAIGIH 213
Query: 180 KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECA 239
+++D ++TY +MS R+F HASPTLFNAG+ LSSCFLV M+DDSI+GIY+TL + A
Sbjct: 214 GNNLDDVVETYELMSSRYFIHASPTLFNAGSEYNYLSSCFLVDMEDDSIDGIYKTLHKTA 273
Query: 240 VISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
+ISK++GGIG++VHNIRA+GS I TNGTS+G+VPMLRVFNDTARYVDQGG KR GAFA+
Sbjct: 274 LISKASGGIGLNVHNIRASGSLIASTNGTSSGLVPMLRVFNDTARYVDQGGNKRPGAFAI 333
Query: 300 YLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGL 359
Y+EPWHADIF L++KKNHGKEE RARDLF+ALW+PDLFM++V+ + W LF P+EA GL
Sbjct: 334 YIEPWHADIFSVLDMKKNHGKEELRARDLFFALWIPDLFMQKVKDDEDWCLFSPDEAPGL 393
Query: 360 ADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
ADC+G EF LY YE EG+A+ VV+A LW IL SQ ETG PYML+KD+CNRKSNQ+N
Sbjct: 394 ADCYGDEFVDLYNQYEAEGRARTVVKAHKLWLAILESQTETGGPYMLYKDSCNRKSNQKN 453
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LGTIKSSNLC EI+EY S ETAVCNL S+ALP F+ K V +++ ++
Sbjct: 454 LGTIKSSNLCCEIVEYCSSEETAVCNLGSLALPAFI--KSVSIDNSDEEVLE-------- 503
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
FDFEKL +T ++T NLNK+IDV YPVE+ + SN++HRPI +GVQGLAD F+ L + F
Sbjct: 504 FDFEKLHSITKVLTRNLNKVIDVTLYPVESTKVSNMKHRPIALGVQGLADVFLELRLPFS 563
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW- 598
S EA++LN IFETIY+ A++ S E+A EGPY ++ SP SKGILQ D+W+ PS+ +
Sbjct: 564 SDEAKKLNIQIFETIYHAAVEASVELAMSEGPYNSFEGSPASKGILQFDLWDHKPSELYN 623
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW L++ + +G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y+RRVL+GE+ V NK
Sbjct: 624 DWDSLKESVKTHGLRNSLLVAPMPTASTSQILGYNECFEPYTSNLYTRRVLAGEYQVANK 683
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
+L+ DL ++G+W+ ++NKII D+GS+Q I IP+ELK +YKTVWEI Q ++DMA DRG
Sbjct: 684 YLVKDLIDLGLWNSAVRNKIIVDNGSIQNISSIPQELKELYKTVWEISQKVIIDMAADRG 743
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+IDQSQS+NIH+ P F K+TS HF W +GLKTGMYYLR++AA+ AI+FTV+
Sbjct: 744 KFIDQSQSMNIHLQNPTFGKLTSCHFYGWQKGLKTGMYYLRTQAASRAIQFTVN 797
>gi|357542100|gb|AET84860.1| ribonucleotide reductase [Micromonas pusilla virus SP1]
Length = 749
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/774 (56%), Positives = 560/774 (72%), Gaps = 35/774 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR GR E + FD +T R+K L+ GLS E+CD V+Q+V + +Y G+TT ++D L+
Sbjct: 1 MRVTKRSGRIEDMKFDNVTNRIKNLTQGLS-ENCDSTKVAQQVFSSLYDGITTQEIDILS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE M T+ PDY +LA R+ SN+HK +F H R K +I D++
Sbjct: 60 AEICIGMITSDPDYETLATRLVASNIHKVCPNNF---------HLAMRKLQKCKIITDEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E+ A + I DRDFD+ YFG KTLE+SYL +V GK+VE PQ+M MRVSIGIH
Sbjct: 111 VEV----AQQVKEYIKTDRDFDFGYFGIKTLEKSYLQRVGGKIVETPQYMFMRVSIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI S + TY MSQ +F HA+PTLFNAGTPRPQ+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 KDIPSVLDTYDKMSQGYFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H+IRA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDIRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL ++ N G +E R RDLF ALW+PDLFM+RV+ G+WSLFCP+ A GL+
Sbjct: 286 LEPWHADIMDFLEIRLNQGDDEARCRDLFSALWIPDLFMKRVEEGGKWSLFCPDTAKGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LYT YE EG A V A ++W IL SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 346 DVYGDEFEALYTRYEEEGLATSTVPASDIWKAILKSQTETGTPYMLYKDACNMKSNQKNL 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLCTEIIEYT ET+VCNLAS+ALP++V ++ + F
Sbjct: 406 GVIKSSNLCTEIIEYTDKDETSVCNLASVALPKYV------------------NTETKTF 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL EVT VT+NLN++ID N+YPVETAR SNL+HRPIG+GVQGLAD FIL G++F+
Sbjct: 448 DFAKLHEVTKTVTKNLNRVIDRNFYPVETARNSNLKHRPIGMGVQGLADVFILCGLSFDC 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW--NVIPSDRW 598
E++ LN IFET+Y+ AL+ SSE+A +G YET+ SP S+GILQP+MW S +
Sbjct: 508 EESRLLNSHIFETMYHAALEASSELAEIDGSYETFQGSPASQGILQPEMWEGETKFSGLY 567
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +R+ I G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFVVVNK
Sbjct: 568 DWEAMRERIKTKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 627
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
HL++DL ++G+WS +K+ ++ GS+Q I +IP+ +K +YKTVWEI Q ++DMA DRG
Sbjct: 628 HLVNDLKKIGLWSKEMKDIMVKAGGSIQNIVDIPDNIKKLYKTVWEISQKCIIDMAADRG 687
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+IDQSQS+N+ M+ P K++S+H W GLKTGMYYLRS+A A I+F+++
Sbjct: 688 RFIDQSQSMNLFMESPTMSKLSSMHMYAWKSGLKTGMYYLRSKAKARPIQFSLE 741
>gi|313844113|ref|YP_004061776.1| hypothetical protein OlV1_143 [Ostreococcus lucimarinus virus OlV1]
gi|312599498|gb|ADQ91520.1| hypothetical protein OlV1_143 [Ostreococcus lucimarinus virus OlV1]
Length = 747
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/772 (56%), Positives = 565/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR GR E + FD IT R+K L+YGLS E CD V+Q+V + +Y G+T ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-EKCDSSKVAQQVASSLYDGITAQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE M T+ PDY +LA RI SN+ K +F +K + KA ++ +++
Sbjct: 60 AEICVGMITSDPDYETLATRITASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
I A + +I RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRV+IGIH
Sbjct: 111 ARI----AGRVRDDIDTKRDYDFGYFGLKTLEKSYLQRLDGVLMETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DIDS ++TY MS+ F HA+PTLFNAGTPRPQ+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 EDIDSVLETYDKMSRGMFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI EFL L+ N G EE R RDLF ALW+PDLFM+RV+ +G WSLFCP++A GL+
Sbjct: 286 LEPWHADIMEFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEESGNWSLFCPDKAPGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D G EFE LYT YE E +A V A ++W IL SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 346 DAVGEEFEALYTKYEEESRATATVPAADVWKAILKSQTETGTPYMLYKDACNQKSNQKNL 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IKSSNLCTEI+E+T ETAVCNLASIALP++V + + F
Sbjct: 406 GVIKSSNLCTEILEFTDKDETAVCNLASIALPKYV------------------DPETKTF 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+EKL EVT VT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL AF+S
Sbjct: 448 DYEKLHEVTKTVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRHAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+++N IFET+Y+ AL+ SSE+A +GPYET+ SP S+G+LQ DMW +DW
Sbjct: 508 DEAKEINARIFETMYHAALEASSELAEVDGPYETFEGSPASQGVLQFDMWEGETKLHYDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFV+VNKHL
Sbjct: 568 DALKERIKEKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL E+G+WS +K+ ++ GS+Q I +IP+E+K +Y+TVWEIK ++DMA DRG +
Sbjct: 628 VDDLKEIGLWSKDMKDLMVKAGGSIQNIVDIPDEIKKLYRTVWEIKMKDVIDMAADRGRF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS+N+ M+ P K++S+H +W +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYSWKKGLKTGMYYLRSKAKARPIQFSLE 739
>gi|378706242|gb|AFC35043.1| hypothetical protein OtV6_135c [Ostreococcus tauri virus RT-2011]
Length = 747
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/773 (56%), Positives = 563/773 (72%), Gaps = 35/773 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KR GR E + FD IT R+K L+YGLS E+CD V+Q+V + +Y G+ ++D L+
Sbjct: 1 MRVIKRSGRIEDMKFDNITNRIKNLTYGLS-ENCDSSKVAQQVASSLYDGINVQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE M T+ PDY +LA RI SN+ K +F +K + KA ++ +++
Sbjct: 60 AEVCVGMITSDPDYETLATRIVASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ A + ++I+ RDFD+ YFG KTLE+SYL ++ G ++E PQ+M MRV+IGIH
Sbjct: 111 AHV----AGIVRNDIVTKRDFDFGYFGLKTLEKSYLQRLDGVLMETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI + ++TY MSQ F HA+PTLFNAGTPRPQ+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 DDIPAVLETYDKMSQGLFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H+IRA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDIRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADI EFL L+ N G EE R RDLF ALW+PDLFM+RV+ GQWSLFCP++A GL+
Sbjct: 286 IEPWHADIMEFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D G EFE LY YE EG+A V A +W IL SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 346 DAVGEEFETLYKKYEDEGRANATVPATEVWKAILKSQTETGTPYMLYKDACNQKSNQKNL 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV-REKDVPVESHPSRIVGSRGSKNRF 479
GTIKSSNLCTEI+EYT ETAVCNLASIALP++V REK +
Sbjct: 406 GTIKSSNLCTEILEYTDKDETAVCNLASIALPKYVDREK-------------------KT 446
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
FD+EKL EVT VT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL +AF+
Sbjct: 447 FDYEKLHEVTKTVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRLAFD 506
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD 599
S EA+++N IFET+Y+ AL+ SSE+A +G YET+ SP S+GI Q DMW +D
Sbjct: 507 SDEAKEINARIFETMYHAALEASSELAEVDGSYETFEGSPASQGIFQFDMWEGETKLHYD 566
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W +R+ + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFV+VNKH
Sbjct: 567 WDAMRERVKTKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKH 626
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL +G+WS +K+ ++ GS+Q I +IP+++K +Y+TVWEIK ++DMA RG
Sbjct: 627 LVDDLKNVGLWSKEMKDLMVKAGGSIQNIVDIPDDIKKLYRTVWEIKMKDVIDMAAQRGR 686
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+IDQSQS+N+ M+ P K++S+H W +GLKTGMYYLRS+A A I+F+++
Sbjct: 687 FIDQSQSMNLFMESPTMSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|165969145|ref|YP_001651045.1| ribonucleotide reductase small subunit 1 [Orgyia leucostigma NPV]
gi|164663641|gb|ABY65861.1| ribonucleotide reductase small subunit 1 [Orgyia leucostigma NPV]
Length = 761
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/772 (54%), Positives = 565/772 (73%), Gaps = 30/772 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV+KRDG ++ V DKIT++L +LSYGL+ + DP ++ +V +Y GVTT++LD+ A
Sbjct: 9 LYVIKRDGSKQTVLLDKITSKLNRLSYGLNKQFIDPAAITIQVVKTIYAGVTTTELDQHA 68
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+ A M H DYA LA RI V + HK+ SF + +Y H L++ +
Sbjct: 69 AKETANMAYIHDDYALLAGRIMVDDNHKHVPDSFVRVVAKLYKH---------NLVSLAL 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+E+ NA L+++I Y RD++Y YF +KTLE YL ++ G+V ER QHMLMRV+IGIH
Sbjct: 120 FEVASANADALEAQIDYKRDYEYKYFAYKTLENGYLKRINGRVAERIQHMLMRVAIGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID+AI+TY++ + + FTHASPTLF AG P+PQLSSCFL+ +K+DSI+G+YETL +CA
Sbjct: 180 RDIDAAIETYNLTANKMFTHASPTLFAAGCPQPQLSSCFLLTLKEDSIKGMYETLADCAQ 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GG+GV+VH RA GS IRGTNGT++G+ P+LRV+N+ R+VDQGG KRKGA AVY
Sbjct: 240 ISKYGGGLGVNVHKARARGSAIRGTNGTASGVEPLLRVYNNCVRHVDQGG-KRKGAMAVY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI++FLNLK+N G E+ +ARDL YALWVPDLFM+RVQ N WSL CP+ GL+
Sbjct: 299 LEPWHADIYDFLNLKRNMGAEDKKARDLLYALWVPDLFMKRVQQNEMWSLMCPDRCPGLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D + EFEKLY YE E + V+A++L+ I+ +Q+ETGTPY+L+KD CN KSNQ+NL
Sbjct: 359 DVYSLEFEKLYEQYESENRFTCQVEARSLFRTIIETQVETGTPYILYKDACNIKSNQKNL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+ SNLC EI++Y+S E AVCNLAS+ + RF+ K+ F
Sbjct: 419 GTIRCSNLCAEIVQYSSSEEIAVCNLASVCVNRFI--------------------KSGVF 458
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF L VT IV +NLNKIID+NYYP+E A+ SNL+HRP+G+G+QGLAD F +LG+ +ES
Sbjct: 459 DFVALKSVTKIVVKNLNKIIDINYYPLEAAKESNLKHRPVGVGIQGLADAFCILGLPYES 518
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
+A+ LNK I ET+YY AL+ S ++A GPY +Y +SP S G+LQ DMWNV P++ W+W
Sbjct: 519 DKAKMLNKQIAETVYYAALEASCDLAKLNGPYSSYSDSPASLGVLQYDMWNVQPTNLWNW 578
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+G+F V+N+HL
Sbjct: 579 ADLKLRIAKHGLRNSLLVAYMPTATTAQILGNNESFEPFTSNLYVRRVLAGDFQVINQHL 638
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + ++ ++N II GSVQKI IP+++K +YKTVWE+ L+DMA DRG +
Sbjct: 639 VEDLCRLNLYDDHMRNSIIAAGGSVQKIDRIPDDIKAVYKTVWEMSSKNLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
IDQSQS N+ + QP+F +TS+H TW RGLKTGMYYLR++ AADAI FTVD
Sbjct: 699 IDQSQSFNVFIAQPSFALLTSVHMHTWKRGLKTGMYYLRTKPAADAIAFTVD 750
>gi|209171046|ref|YP_002268193.1| agip163 [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436637|gb|ACI28864.1| unknown [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 772
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/764 (56%), Positives = 556/764 (72%), Gaps = 28/764 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YVVKRDG + V D+ITA ++ L YGL+ E+ DP V+ KV GV GV+T +L+ A
Sbjct: 3 LYVVKRDGSHQEVRLDEITALVQSLCYGLNAEYVDPAAVTVKVVKGVRPGVSTEELNAYA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+ AA+MT H DYA LA RI V NLHK SFSE IK+++ H L++DD+
Sbjct: 63 ADVAASMTYIHYDYALLAGRILVDNLHKRLDSSFSEIIKNLHGH---------GLVSDDL 113
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
I +AA LD+ I ++ DF+Y YFG+KTLE YLLK+ +V ERPQHMLMRV++GIH
Sbjct: 114 LRISETHAATLDAAIAHELDFEYKYFGYKTLENGYLLKIDNRVAERPQHMLMRVALGIHG 173
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+ AI+TY MMSQ+ FTHASPTLF+AGT PQ+ SCFL+ ++DDSI+GIY TL +CA
Sbjct: 174 DDIEDAIETYRMMSQKLFTHASPTLFSAGTRIPQMCSCFLLGVRDDSIDGIYRTLGDCAA 233
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIGV+VH +RA GS I TNGT++G+ PM+RVFN+ R+VDQGG KRKGA AVY
Sbjct: 234 ISKYGGGIGVNVHQVRARGSKINSTNGTASGLEPMVRVFNNMVRHVDQGG-KRKGALAVY 292
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADI+ LNLK+N G E+ +ARDL YALWVPDLFM RV + WSL CP++ GLA
Sbjct: 293 IEPWHADIYSVLNLKRNMGAEDCKARDLMYALWVPDLFMRRVNADDMWSLMCPHQCPGLA 352
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G EFE+LY YE EG+ ++ V+AQ+L I+ +Q+ETG PYMLFKD CNRKSNQQNL
Sbjct: 353 DCYGDEFERLYERYESEGRYRQRVRAQDLHRFIVETQVETGGPYMLFKDACNRKSNQQNL 412
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IK SNLC EI++Y+ ETAVCNLASIA+ R VR ++ +
Sbjct: 413 GVIKCSNLCAEIVQYSDAEETAVCNLASIAVNRCVRVDEMT------------------Y 454
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL +T +V NLNKIID N+YP+ +ARRSN +HRPIG+G+QGLAD F+LL M +ES
Sbjct: 455 DFEKLKAITKVVVRNLNKIIDRNHYPIASARRSNEKHRPIGVGIQGLADAFVLLRMPYES 514
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LNK I ETIYY AL+ S E+A ++G Y T+ SP S+G+LQ DMWN PS WDW
Sbjct: 515 EEAAVLNKQIAETIYYGALEASCELAQRDGSYSTFAGSPASRGVLQYDMWNATPSALWDW 574
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I +G+RNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L
Sbjct: 575 QALKDDIRAHGLRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYL 634
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL ++ +++P I+N I GS+Q I IP+ +K +YKT WE+K +++MA DR +
Sbjct: 635 IDDLIKLNVYTPEIRNAIFAHKGSIQNIEGIPDSVKNLYKTAWEMKAKRMIEMAADRNAF 694
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAA 764
IDQSQS N+ + QP + +TS+H +W GLKTGMYYLR++ AA
Sbjct: 695 IDQSQSFNLFVAQPTYAVMTSIHNYSWRCGLKTGMYYLRTKPAA 738
>gi|131840167|ref|YP_001096176.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|84181499|gb|ABC55102.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706742|gb|ABG42968.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 3]
gi|129560660|dbj|BAF48955.1| ribonucleotide reductase large subunit [Cyprinid herpesvirus 3]
Length = 806
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/823 (53%), Positives = 573/823 (69%), Gaps = 33/823 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV KRDG +E + K+ R+ + G +E DP L++QK+ G+ G TS++DEL
Sbjct: 5 IYVTKRDGTKEPLDMAKVVERINEC--GFRSESVDPQLLAQKIEPGIGNGCKTSEIDELL 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A TA+ MTT HPDY+ LAARIAV+NLHK T FSE K ++ + N +GL+APLIA
Sbjct: 63 AHTASNMTTTHPDYSKLAARIAVTNLHKLTSPKFSEVCKRLWFNVNPDTGLRAPLIAQKF 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+ K+A LD+ + + DF Y YFGFKTLERSY+LK +E PQH LMR ++ IH
Sbjct: 123 YEVSQKHAERLDAAVRHHADFGYSYFGFKTLERSYMLKGPEGPIETPQHTLMRCALQIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+ID+ ++TY +S R+FTHASPTLFN+ +P+PQLSSCFL+ MK DS+EGI +T+K CA+
Sbjct: 183 DNIDALLQTYGFLSSRYFTHASPTLFNSCSPKPQLSSCFLLNMKSDSMEGIADTIKSCAL 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGG+G+S+ N+R G+YI+GTNG SNGIVP LR+FN R VDQGG KR GA AVY
Sbjct: 243 ISKHAGGLGMSISNLRGKGAYIKGTNGHSNGIVPTLRIFNALERMVDQGGNKRPGALAVY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH D+F+FL L+KN G +E R RDLF ALW+PDLFM+RV+ G+WSL CP GL
Sbjct: 303 MEPWHVDVFDFLELRKNTGSDEQRTRDLFQALWIPDLFMQRVKDGGEWSLMCPASCPGLD 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE LYT YE EGKA++ V+A++LW +L +Q+ETG P+ML+KD CN KSN Q+L
Sbjct: 363 EVWGPEFEALYTRYEAEGKARRTVKARDLWNSVLVAQLETGGPFMLYKDACNAKSNHQHL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI++YT+ E AVCNLAS+AL FVR + + P +
Sbjct: 423 GTIKCSNLCTEIVQYTNSEEVAVCNLASVALNEFVR---ITIAEDPYE-----------Y 468
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+ LA+V ++T NLNK+ID N+YPV A RSN RHRPIGIGVQGLAD F+++G+ F
Sbjct: 469 DFQLLADVVRMITRNLNKVIDGNFYPVPEAMRSNKRHRPIGIGVQGLADVFMMMGIPFTC 528
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
+A+ +NK IFETIYY AL S ++A ++GPY TY SPVSKG+LQ DMW + D
Sbjct: 529 GKARDMNKMIFETIYYAALDESCKLAQRDGPYPTYEGSPVSKGLLQFDMWGLKREDLSGM 588
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I ++GVRNSLLV+PMPTAST+QILGN E EP +SN+Y RRVLSGEF VVN
Sbjct: 589 WDWNELRLRIQRHGVRNSLLVSPMPTASTAQILGNTESIEPLSSNLYQRRVLSGEFQVVN 648
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HL+ L +G+W+ ++ ++I GSVQ I PE LK IYKT +EI Q L+ MA +R
Sbjct: 649 RHLVEALERLGLWNDNMRTQLIVHKGSVQNIEGFPEHLKPIYKTAYEISQKDLITMAAER 708
Query: 718 GCYIDQSQSLNIHM--DQPNF--KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT 773
++DQSQSLN+ + D P KK+T++H WS GLKTGMYYLR++AA ++F+V
Sbjct: 709 APFVDQSQSLNLFLCEDDPKLKMKKLTAMHLHAWSSGLKTGMYYLRTKAAVAPVQFSVAP 768
Query: 774 SVFKEKPEKPELVVDDETKMA-----QVVCSLTNREECMACGS 811
V E K +D + + +VVC N E C C S
Sbjct: 769 EVSAEASRKRR--AEDGSAFSKQPKLEVVC---NEEVCTMCSS 806
>gi|422933669|ref|YP_007003794.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 1]
gi|386686075|gb|AFJ20428.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 1]
Length = 798
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/820 (54%), Positives = 576/820 (70%), Gaps = 35/820 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDG V K+ R++K + D L++Q+V AG++ G T+++D L
Sbjct: 5 MTVIKRDGSVVPVDIGKVAERVRKCE----IDSVDCELLAQQVQAGIHNGCKTAEIDVLL 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A TAA+MTT HP+Y LAA+++VSNLH T FS+T + ++ + N ++APLI+D+I
Sbjct: 61 AHTAASMTTKHPNYGLLAAKVSVSNLHLQTVPEFSKTCEKLWKNINPDLDVEAPLISDEI 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+++ ++A LD+ +I+ D Y YFGFKTLERSYLLK +ERPQHMLMR ++ IHK
Sbjct: 121 FKLSQEHAEELDAALIHGNDHTYSYFGFKTLERSYLLKGPKGPIERPQHMLMRCALQIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DI S ++TY ++S ++ HASPTLFN+G+ RPQLSSCFL+ + DDS+ GI ET++ CA+
Sbjct: 181 HDIPSVLETYRLLSNKFMIHASPTLFNSGSSRPQLSSCFLLNLTDDSMAGIMETVRRCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ N+RA+GSYI GTNG SNG+VP+LR+FN AR VDQ GGKR GAFA+Y
Sbjct: 241 ISKYAGGIGLSMSNLRASGSYIAGTNGQSNGLVPVLRIFNMVARLVDQ-GGKRPGAFAIY 299
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADIF+FL+L+KN G +E R RDLF ALWVPDLFM+RV+ +G WSL CP GL
Sbjct: 300 MEPWHADIFDFLDLRKNSGVDERRTRDLFTALWVPDLFMQRVRDDGDWSLMCPASCPGLD 359
Query: 361 DCWGAEFEKLYTHYE-REGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
WG EF +LY YE G ++VV+A+ LW +IL SQ+ETG+PYML+KD+ N KSN QN
Sbjct: 360 RVWGHEFNELYEQYEATPGAVRRVVKARYLWSQILVSQLETGSPYMLYKDSANAKSNHQN 419
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRF 479
LGTI+ SNLCTEI+EYT E AVCNLASIALP FV++
Sbjct: 420 LGTIRCSNLCTEIMEYTDSQEVAVCNLASIALPEFVQD------------------GGYV 461
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
F+ E LA VT + T NLNKIID N+YP+E +SNLRHRPIGIGVQGLAD F + M F
Sbjct: 462 FNHEYLAHVTKVATRNLNKIIDCNFYPLEECSKSNLRHRPIGIGVQGLADVFQRMMMPFT 521
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD--- 596
SPEA++LN++IFETIYY AL+ S E+A + GPY +Y SPVSKGILQ DMWNV D
Sbjct: 522 SPEAKKLNREIFETIYYAALQASCELAKEHGPYSSYQGSPVSKGILQFDMWNVKDEDLSG 581
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
RWDW LR +I ++GVRNSLLVAPMPTAST+QILGNNE EPYTSN Y RRVLSG+F +V
Sbjct: 582 RWDWAELRRLIGEHGVRNSLLVAPMPTASTAQILGNNESIEPYTSNFYQRRVLSGDFQIV 641
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
N HL+ L G+W+ ++ ++ GSVQ IP PE+LK I+KTVWE+ Q ++DMA D
Sbjct: 642 NPHLVKCLETRGLWNEDMRLQLTIHRGSVQNIPGFPEDLKEIFKTVWELSQRDIIDMAAD 701
Query: 717 RGCYIDQSQSLNIHMDQPN-----FKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
R +IDQSQSLN+H+ + KK+T++H W +GLKTGMYYLR++AAAD ++FTV
Sbjct: 702 RAPFIDQSQSLNLHLGHEDDQNIKLKKLTAMHMHGWGKGLKTGMYYLRTKAAADPVQFTV 761
Query: 772 DTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
S + P+ E K + C+ + C+ C S
Sbjct: 762 MPSTKRPCPDDGEKRSRKSPKTTNIECT---DDVCVMCSS 798
>gi|320581724|gb|EFW95943.1| ribonucleotide reductase large subunit Rnr1 [Ogataea parapolymorpha
DL-1]
Length = 816
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/824 (53%), Positives = 575/824 (69%), Gaps = 38/824 (4%)
Query: 6 RDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAA 65
+ G++ D + L L+ GL+TE ++ KV +G+ + +T +L +L AE +A
Sbjct: 13 KSGKESVFSRDILRNHLLSLAQGLNTEFVSIDVILDKVVSGLPESLTVQELLDLTAEVSA 72
Query: 66 AMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIM 125
++TT H D++ LAAR+ V +L K SFSE + M + + LIA D++EI+
Sbjct: 73 SLTTVHYDHSYLAARVLVRHLQKQVCGSFSENVNRMRQYRPSQYRSFKSLIAADVHEIVN 132
Query: 126 KNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS 185
K+A L+ I +DRD + DYFGF+T+ERSYLLK+ G+ E PQ++ MRV++GIHK +I+
Sbjct: 133 KHADVLNKAIDFDRDLELDYFGFRTMERSYLLKMDGRPCETPQYLFMRVAVGIHKGNIER 192
Query: 186 AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSA 245
++TY +MSQ++F HASPTLFNAGT P LSSCFL+ M DSI GI+ T+ + A+ISK+A
Sbjct: 193 VLETYRLMSQKYFIHASPTLFNAGTETPNLSSCFLLAMDGDSINGIFRTIHKSALISKAA 252
Query: 246 GGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWH 305
GGIG+ V NIRA GSYI GTNGTSNG+VPM++VFN TA+YVDQGG KR GAF +YLEPWH
Sbjct: 253 GGIGIHVSNIRAAGSYISGTNGTSNGLVPMVQVFNSTAKYVDQGGNKRPGAFCMYLEPWH 312
Query: 306 ADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGA 365
AD+FEFL+L+KNHGKEE RARDLFYALW+PDLFME+V+ + +W LF +++ GL+D +G
Sbjct: 313 ADVFEFLDLRKNHGKEETRARDLFYALWIPDLFMEKVEKDQEWCLFSEDQSPGLSDSYGD 372
Query: 366 EFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKS 425
EF KLY YEREG+ + V+AQ LW IL +Q ETG P++L+KD CN+KSNQQNLGTIKS
Sbjct: 373 EFVKLYNRYEREGRYIRKVRAQKLWHAILVAQTETGNPFLLYKDACNKKSNQQNLGTIKS 432
Query: 426 SNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKL 485
SNLC EI+EY+S ETAVCNL S+ALP FV + ++G R FDF+ L
Sbjct: 433 SNLCCEIVEYSSNEETAVCNLGSLALPSFVHD--------------NKGE--RKFDFKFL 476
Query: 486 AEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQ 545
+V + NL+ +IDV YP+ A SN RHRPI IGVQGLAD F L M F SPE+++
Sbjct: 477 HDVCKTLARNLDTVIDVGSYPLPEAEVSNKRHRPIAIGVQGLADVFFKLRMPFGSPESRK 536
Query: 546 LNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRD 605
LN IFETIY+ AL+TS+E+A GPY++Y SP+SKG+LQ D WN PSD WDW L+
Sbjct: 537 LNILIFETIYHAALETSAELAEIYGPYDSYAGSPISKGVLQYDFWNAKPSDMWDWEGLKA 596
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I +NGVRNSLLVA MPTASTSQI G ECFEP TSN+YSRRVLSGEF VVN++L+ DL
Sbjct: 597 KIHRNGVRNSLLVALMPTASTSQIFGFTECFEPITSNMYSRRVLSGEFQVVNRYLIDDLV 656
Query: 666 EMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQ 725
++G+W P +KN+I+ +GSVQ I IP + K IYKTVWEI+Q L+DMA DR +IDQSQ
Sbjct: 657 DLGLWGPEMKNEILRMEGSVQAIESIPADTKEIYKTVWEIQQRALIDMAADRAPFIDQSQ 716
Query: 726 SLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPEL 785
S+N+ M P K+TS+HF W +GLKTG+YYLR++AAA AIKFTV S FK +
Sbjct: 717 SMNLFMRNPTMSKLTSMHFYAWKKGLKTGIYYLRTQAAASAIKFTVTPSRFKRSISESR- 775
Query: 786 VVDDETKMAQ------------------VVCSLTNREECMACGS 811
D TK + + C + + E C AC S
Sbjct: 776 ---DTTKRRKSNGNEVTEGYNIYDKDNVLACKVGDPETCDACSS 816
>gi|68629683|gb|AAY99446.1| ribonucleotide reductase [Cyprinid herpesvirus 3]
Length = 806
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/823 (53%), Positives = 572/823 (69%), Gaps = 33/823 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV KRDG +E + K+ R+ + G +E DP L++QK+ G+ G TS++DEL
Sbjct: 5 IYVTKRDGTKEPLDMAKVVERINEC--GFRSESVDPQLLAQKIEPGIGNGCKTSEIDELL 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A TA+ MTT HPDY+ LAARIAV+NLHK T FSE K ++ + N +GL+APLIA
Sbjct: 63 AHTASNMTTTHPDYSKLAARIAVTNLHKLTSPKFSEVCKRLWFNVNPDTGLRAPLIAQKF 122
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE+ K+A LD+ + + DF Y YFGFKTLERSY+LK +E PQH LMR ++ IH
Sbjct: 123 YEVSQKHAERLDAAVRHHADFGYSYFGFKTLERSYMLKGPEGPIETPQHTLMRCALQIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+ D+ ++TY +S R+FTHASPTLFN+ +P+PQLSSCFL+ MK DS+EGI +T+K CA+
Sbjct: 183 DNXDALLQTYGFLSSRYFTHASPTLFNSCSPKPQLSSCFLLNMKSDSMEGIADTIKSCAL 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGG+G+S+ N+R G+YI+GTNG SNGIVP LR+FN R VDQGG KR GA AVY
Sbjct: 243 ISKHAGGLGMSISNLRGKGAYIKGTNGHSNGIVPTLRIFNALERMVDQGGNKRPGALAVY 302
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH D+F+FL L+KN G +E R RDLF ALW+PDLFM+RV+ G+WSL CP GL
Sbjct: 303 MEPWHVDVFDFLELRKNTGSDEQRTRDLFQALWIPDLFMQRVKDGGEWSLMCPASCPGLD 362
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE LYT YE EGKA++ V+A++LW +L +Q+ETG P+ML+KD CN KSN Q+L
Sbjct: 363 EVWGPEFEALYTRYEAEGKARRTVKARDLWNSVLVAQLETGGPFMLYKDACNAKSNHQHL 422
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI++YT+ E AVCNLAS+AL FVR + + P +
Sbjct: 423 GTIKCSNLCTEIVQYTNSEEVAVCNLASVALNEFVR---ITIAEDPYE-----------Y 468
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+ LA+V ++T NLNK+ID N+YPV A RSN RHRPIGIGVQGLAD F+++G+ F
Sbjct: 469 DFQLLADVVRMITRNLNKVIDGNFYPVPEAMRSNKRHRPIGIGVQGLADVFMMMGIPFTC 528
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
+A+ +NK IFETIYY AL S ++A ++GPY TY SPVSKG+LQ DMW + D
Sbjct: 529 GKARDMNKMIFETIYYAALDESCKLAQRDGPYPTYEGSPVSKGLLQFDMWGLKREDLSGM 588
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I ++GVRNSLLV+PMPTAST+QILGN E EP +SN+Y RRVLSGEF VVN
Sbjct: 589 WDWNELRLRIQRHGVRNSLLVSPMPTASTAQILGNTESIEPLSSNLYQRRVLSGEFQVVN 648
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HL+ L +G+W+ ++ ++I GSVQ I PE LK IYKT +EI Q L+ MA +R
Sbjct: 649 RHLVEALERLGLWNDNMRTQLIVHKGSVQNIEGFPEHLKPIYKTAYEISQKDLITMAAER 708
Query: 718 GCYIDQSQSLNIHM--DQPNF--KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT 773
++DQSQSLN+ + D P KK+T++H WS GLKTGMYYLR++AA ++F+V
Sbjct: 709 APFVDQSQSLNLFLCEDDPKLKMKKLTAMHLHAWSSGLKTGMYYLRTKAAVAPVQFSVAP 768
Query: 774 SVFKEKPEKPELVVDDETKMA-----QVVCSLTNREECMACGS 811
V E K +D + + +VVC N E C C S
Sbjct: 769 EVSAEASRKRR--AEDGSAFSKQPKLEVVC---NEEVCTMCSS 806
>gi|224001624|ref|XP_002290484.1| ribonucleoside reductase [Thalassiosira pseudonana CCMP1335]
gi|220973906|gb|EED92236.1| ribonucleoside reductase [Thalassiosira pseudonana CCMP1335]
Length = 811
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/836 (52%), Positives = 591/836 (70%), Gaps = 50/836 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV K+DGR E + +KI RL+ LS LST + ++ + G Y + T ++D LA
Sbjct: 1 MYVTKKDGRLELLDKNKILQRLQSLSTNLSTPYLSLPTLATSILHGTYPNLPTREIDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
+ETAA+M+T HPDY LAARI S HK+T SFS+ + + NE G + ++I
Sbjct: 61 SETAASMSTQHPDYGRLAARICASANHKSTPDSFSKAMLLL----NEEGG---GFVNNEI 113
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV-QGKVVERPQHMLMRVSIGIH 179
+++ + +D I ++RDF+ YFG+KTLERSYLLK+ + +VER Q++ MRV++GIH
Sbjct: 114 ADLVKRRGKEIDDRIKHERDFEMTYFGYKTLERSYLLKLNEDTIVERIQYLWMRVALGIH 173
Query: 180 -KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
++ +A +TY +MS+ +FTHASPTLF+AGT PQLSSCFLV M DDSI GIY+TLK C
Sbjct: 174 CYANLQAAFETYDLMSRGYFTHASPTLFHAGTTHPQLSSCFLVQMSDDSINGIYDTLKRC 233
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
AVISK+AGGIG+ VH IRA G++I+GT G SNG+VPMLRVF+ T+ YVDQGGGKR GAFA
Sbjct: 234 AVISKAAGGIGLCVHKIRARGTFIKGTRGVSNGLVPMLRVFDVTSHYVDQGGGKRPGAFA 293
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
+YLEPWHADIF+ LNLKKNHGKEE RAR+LFY LWVPDLFM+RV+ +G WSL CP+ G
Sbjct: 294 IYLEPWHADIFDVLNLKKNHGKEEQRARNLFYGLWVPDLFMKRVEEDGVWSLMCPHRCPG 353
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L++C G +FE+LY YE +G+ + V+A+ LW IL +QIETGTPY+L+KD N+KSNQQ
Sbjct: 354 LSECHGEKFEELYAKYESDGRYTRQVRARELWAAILEAQIETGTPYLLYKDAANKKSNQQ 413
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
NLGTI+ SNLCTEII+YT+ E AVCNLASI LP+FV V + GS
Sbjct: 414 NLGTIQCSNLCTEIIQYTNEEEVAVCNLASICLPKFV------VSDRGN--FGSTEGSGA 465
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
+FD E+L +V IVT+NL+K+IDVN YP+E A++SN HRP+GIGV GLADTF+ LG+ F
Sbjct: 466 YFDHEQLHKVAKIVTKNLDKVIDVNQYPIEGAKKSNRSHRPVGIGVSGLADTFLRLGLPF 525
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV----IP 594
S EA+ LN+ IFETIY+ +L+ S+EIA ++G YET+ SP S+G LQ ++W V P
Sbjct: 526 ASEEAKTLNEAIFETIYHASLEASNEIAREKGSYETFAGSPASEGKLQFNLWGVDDVETP 585
Query: 595 SDR-------------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
S R +DW LR I + G+RNSLLVAPMPTASTSQILG NEC
Sbjct: 586 SHRKDQSALAFQKYSTQVNGGGYDWETLRQNIIEGGLRNSLLVAPMPTASTSQILGVNEC 645
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
FEP+ SN+Y RRV +GEF++VN HL+ DLT++G+W+ +++N+++ D GSV KI +P+ L
Sbjct: 646 FEPFASNLYVRRVKAGEFIIVNPHLIQDLTDLGLWNQSVRNQLMRDGGSVAKIECVPDRL 705
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
K +YKTVWE+K ++DMA DRG +IDQSQSLN+ + P K+T++HF W +GLKTG+
Sbjct: 706 KGLYKTVWEMKMKDVIDMAADRGKFIDQSQSLNLFIADPTVDKLTAMHFYAWKKGLKTGI 765
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
YYLR+R A +AI++TV+ E P+ Q + +L + E C++C +
Sbjct: 766 YYLRTRPAVNAIQYTVEKDALPEVDASPQ----------QNIPTLDDSETCLSCSA 811
>gi|149238952|ref|XP_001525352.1| ribonucleoside-diphosphate reductase large chain [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450845|gb|EDK45101.1| ribonucleoside-diphosphate reductase large chain [Lodderomyces
elongisporus NRRL YB-4239]
Length = 862
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/756 (56%), Positives = 547/756 (72%), Gaps = 22/756 (2%)
Query: 22 LKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI 81
L+ LS GL H + +G+ +TT + +ET AA HPDY+ LA R+
Sbjct: 28 LRSLSKGLDATHLRLEEAIDAIMSGLPDTLTTKEFYTYVSETVAARVIYHPDYSILAGRV 87
Query: 82 AVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDF 141
L FSE ++ + Y+ R G I++D Y+++M++ D I DRD+
Sbjct: 88 EAKFLQLQVPYRFSENVERL-KQYSPRKGKSFSPISEDFYKVVMEHKDVFDKMIKSDRDY 146
Query: 142 DYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHA 201
D YFG KTLE SYLL++ G+V E PQ M +RVSIGIH + +TY++MSQ++F HA
Sbjct: 147 DLTYFGIKTLENSYLLRIDGEVAETPQQMFLRVSIGIHTHSVSHVEETYNLMSQKYFIHA 206
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
PTL+NAG+ LSSCFL+ MKDDSI+GIY+TL E A+ISK++GG+G+ VH+IRA GSY
Sbjct: 207 LPTLYNAGSKFNYLSSCFLMAMKDDSIDGIYKTLHETALISKASGGVGIHVHDIRANGSY 266
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I TNG SNG+VPMLRVFN+TAR+VDQGGGKR GAFA+YLEPWHAD+F+ L+++KNHG E
Sbjct: 267 IASTNGLSNGLVPMLRVFNNTARFVDQGGGKRPGAFAIYLEPWHADVFDILDMRKNHGNE 326
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAK 381
EHR RDLFY LW+PDLFMERV+TNGQWSLF P+EA GL+D +G +F++LY YE+E A
Sbjct: 327 EHRTRDLFYGLWIPDLFMERVKTNGQWSLFSPDEAPGLSDVYGDDFKELYERYEKEKLAT 386
Query: 382 KVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTET 441
+ + AQ LW IL SQ ETG PYML+KD CNRKSNQ+NLGTIKSSNLC EIIEY+SPTET
Sbjct: 387 RTINAQKLWLAILESQTETGGPYMLYKDACNRKSNQKNLGTIKSSNLCCEIIEYSSPTET 446
Query: 442 AVCNLASIALPRF--VREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKI 499
AVCNLAS+ALP F V E D+ FDF KL EVT +VT+NLNK+
Sbjct: 447 AVCNLASLALPSFLEVSEDDIK------------------FDFLKLHEVTKVVTKNLNKV 488
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHAL 559
IDV YPVE+A+ SN +HRPI +GVQGLAD F+ L + F+S A+ LN IFET+Y+ A+
Sbjct: 489 IDVTMYPVESAKNSNKKHRPIALGVQGLADLFLELRLPFDSSAAKNLNIQIFETVYHAAI 548
Query: 560 KTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW-DWGVLRDMISKNGVRNSLLV 618
+ S E++ EGPY ++ SP SKG LQ D+WN PSD + DW +L+ + K G+RNSLLV
Sbjct: 549 EASMELSIVEGPYASFQGSPASKGKLQFDLWNHKPSDLYDDWDILKSKVMKYGLRNSLLV 608
Query: 619 APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKI 678
APMPTASTSQILG NECFEPYTSN+Y+RRVLSGEF VVNK+L+ DL ++G+W+ ++NK+
Sbjct: 609 APMPTASTSQILGFNECFEPYTSNLYNRRVLSGEFQVVNKYLIKDLIDLGLWNSAMRNKL 668
Query: 679 IYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKK 738
+ D GSVQ I +P+ELK +Y+TVWE+KQ ++DMA DR +IDQ QS+NI++ P K
Sbjct: 669 MMDGGSVQNIDILPKELKTLYRTVWELKQKDIIDMAADRAKFIDQLQSMNIYLQNPTIGK 728
Query: 739 VTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
+TS HF W GLKTGMYYLR++AA AI+FT+D +
Sbjct: 729 LTSCHFHAWEMGLKTGMYYLRTQAATRAIQFTIDAN 764
>gi|68490738|ref|XP_710811.1| hypothetical protein CaO19.13267 [Candida albicans SC5314]
gi|68490761|ref|XP_710800.1| hypothetical protein CaO19.5845 [Candida albicans SC5314]
gi|46432045|gb|EAK91552.1| hypothetical protein CaO19.5845 [Candida albicans SC5314]
gi|46432057|gb|EAK91563.1| hypothetical protein CaO19.13267 [Candida albicans SC5314]
Length = 816
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/826 (53%), Positives = 568/826 (68%), Gaps = 44/826 (5%)
Query: 8 GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAM 67
G +E KI L+++S+ L D ++ + V G+ +T +L AE A+
Sbjct: 9 GEEEDFDSVKIHKLLEEVSFNLGDLDLDQIV--ESVQRGLPSSLTIEELYTFIAEVIASR 66
Query: 68 TTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN 127
HPDYA LA RI L+ SFSE ++ + + +S +P I+ Y+++ K+
Sbjct: 67 VIYHPDYAILAGRIETRKLYLKVPYSFSENVERLRKYRPRKSNSYSP-ISSAFYKVVKKH 125
Query: 128 AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAI 187
LD I RD++ YFG KTLE SYLLK+ G+V E PQ++ MRV+IGIH++DI++
Sbjct: 126 GEFLDKVIDKTRDYNLTYFGIKTLESSYLLKIDGEVAELPQYLFMRVAIGIHQNDINAIA 185
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
+TY +MSQ++F HASPTL+NAG+ LSSCFLV MKDDSI+GI++TL E A+ISK++GG
Sbjct: 186 ETYDLMSQKYFIHASPTLYNAGSEFNYLSSCFLVAMKDDSIDGIFKTLNEAALISKASGG 245
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+ VHNIR+ GSYI TNG SNG+VPMLRV+N+TARYVDQGGGKR GAFA+Y+EPWH D
Sbjct: 246 IGIHVHNIRSNGSYIASTNGNSNGLVPMLRVYNNTARYVDQGGGKRPGAFAIYIEPWHGD 305
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
IF+ L ++KNHG EE R RDLFY LW+PDLFM+RV+ N W+LF PNEA GL+D +G EF
Sbjct: 306 IFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFSPNEAVGLSDVYGEEF 365
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSN 427
EKLY YE EG KV A LW IL SQ ETG PYML+KD CN KSNQ+N+GTIKSSN
Sbjct: 366 EKLYCKYESEGFGTKV-SAHKLWLAILHSQTETGGPYMLYKDACNTKSNQKNIGTIKSSN 424
Query: 428 LCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAE 487
LC EI+EY+SP ETAVCNLAS+ALP +++ + + FDFEKL
Sbjct: 425 LCCEIVEYSSPKETAVCNLASLALPTYLKTTEDAIG----------------FDFEKLHS 468
Query: 488 VTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLN 547
VT ++T NLN++IDV YPVETA SN RHRPI +GVQGLAD F L + F+S A+ LN
Sbjct: 469 VTKVLTRNLNRVIDVTKYPVETAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLN 528
Query: 548 KDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMI 607
IFETIY+ AL+ S E+A KEGPYET+ SP SKGILQ DMW PS +DW L+D I
Sbjct: 529 IQIFETIYHAALEASVELAMKEGPYETFQGSPASKGILQFDMWKHKPSPMYDWHALKDNI 588
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y+RRVL+GE+ +VNK+L+ DL ++
Sbjct: 589 QNFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYNRRVLAGEYQIVNKYLIKDLMDL 648
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
GIW ++NKII ++GS+Q IP IP+E+K +YKTVWE+ Q ++DMA DRG ++DQSQS+
Sbjct: 649 GIWDSAMRNKIIMENGSIQNIPNIPDEIKQLYKTVWELSQKVIIDMAADRGKFVDQSQSM 708
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT----SVFKEKPEK- 782
NIH+ P K+TS HF W +GLKTGMYYLR++AA+ AI+FTVD V + P+K
Sbjct: 709 NIHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASRAIQFTVDAKEAEKVGTKVPQKS 768
Query: 783 -------------------PELVVDDETKMAQVVCSLTNREECMAC 809
P+ + D + C++ + E C +C
Sbjct: 769 LKRKKYMEPQPRKKTAYSTPDSELYDIHDSTPITCNIEDLESCQSC 814
>gi|269963258|ref|ZP_06177591.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832006|gb|EEZ86132.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 752
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/771 (54%), Positives = 559/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E DK+T R + L+ GL E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++ T HPDYA LAAR+ VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDTY 107
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ KN L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRV++ +
Sbjct: 108 VDFAAKNQFALEEMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIY+TLK+CA+
Sbjct: 168 DDLEEIRELYDLLSHGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI FL+L+KNHGKEE RARDLF ALWVPDLFMERV+ + +W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +GAEF + Y YER G K ++A+ L +I+ SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+E ++P ETA CNLAS+ALP+FV + F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDSG--------------------F 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + + F+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA QLN+DI ET+Y+ +L+ S EIAA++G Y +Y SP+S G Q D+W+ PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + G+W+ I++ II ++GSVQ I IP++L+ +Y+TVWEI Q ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
+ QSQSLN+ + P F ++ ++HF W RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|350532635|ref|ZP_08911576.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
rotiferianus DAT722]
Length = 752
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/771 (54%), Positives = 560/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E DK+T R + L+ GL E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++ T HPDYA LAAR+ VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDTY 107
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ + KN L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRV++ +
Sbjct: 108 VDFVAKNQFALEDMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMYMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIY+TLK+CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI FL+L+KNHGKEE RARDLF ALWVPDLFMERV+ + +W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +GAEF + Y YER G K ++A+ L +I+ SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+E ++P ETA CNLAS+ALP+FV + F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDTG--------------------F 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + + F+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA QLN+DI ET+Y+ +L+ S EIAA++G Y +Y SP+S G Q D+W+ PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + G+W+ I++ II ++GSVQ I IP++L+ +Y+TVWEI Q ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
+ QSQSLN+ + P F ++ ++HF W RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|444425041|ref|ZP_21220489.1| ribonucleoside-diphosphate reductase subunit alpha [Vibrio
campbellii CAIM 519 = NBRC 15631]
gi|444241651|gb|ELU53172.1| ribonucleoside-diphosphate reductase subunit alpha [Vibrio
campbellii CAIM 519 = NBRC 15631]
Length = 752
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/771 (54%), Positives = 559/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E DK+T R + L+ GL E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++ T HPDYA LAAR+ VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDAY 107
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ + KN L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRV++ +
Sbjct: 108 VDFVAKNQFALEEMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIY+TLK+CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI FL+L+KNHGKEE RARDLF ALWVPDLFMERV+ + +W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +GAEF + Y YER G K ++A+ L +I+ SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+E ++P ETA CNLAS+ALP+FV + F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDAG--------------------F 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + F+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHFPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA QLN+DI ET+Y+ +L+ S EIAA++G Y +Y SP+S G Q D+W+ PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + G+W+ I++ II ++GSVQ I IP++L+ +Y+TVWEI Q ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
+ QSQSLN+ + P F ++ ++HF W RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|313768128|ref|YP_004061559.1| hypothetical protein BpV1_129c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599735|gb|ADQ91756.1| hypothetical protein BpV1_129c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 748
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/774 (56%), Positives = 564/774 (72%), Gaps = 36/774 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR GR E V FD +T R+ KL+ GLS E D ++Q+V + +Y G+ T ++D L+
Sbjct: 1 MRVTKRSGRVEDVKFDNVTNRISKLTEGLS-ETVDVTKIAQQVFSSIYDGIKTPEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE M T+ PDY LA RI SN+ K +F H R KA ++ ++
Sbjct: 60 AEICIGMITSDPDYEILATRITASNIQKRAANNF---------HIAMRKLHKAGIVTHEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E+ K + +I +RDF++ YFG KTLE+ YL K+ G+++E PQ++ MRV+IGIH
Sbjct: 111 LEVSSK----VKDDIKPERDFEFGYFGLKTLEKGYLQKIDGEIIETPQYLYMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID ++TY +S+ F HA+PTLFNAGTPRPQ+SSCFL+ K+DSI+GIY+T+KECA
Sbjct: 167 HDIDHVLETYEALSKGLFIHATPTLFNAGTPRPQMSSCFLIANKEDSIDGIYDTVKECAR 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ VH++RA S+IRGTNGTS+GI+PMLRV+N TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGLHVHDVRANKSHIRGTNGTSDGIIPMLRVYNSTARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL ++ N G EE R RDLF A+W+PDLFM+RV+++G WSLFCP++A GL+
Sbjct: 286 LEPWHADILDFLEIRLNQGDEEARCRDLFSAMWIPDLFMKRVESDGNWSLFCPDQAKGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE EG A KVV A +W I+ SQ ETGTPYML+KD CN KSN +++
Sbjct: 346 DVYGKEFEDLYEKYESEGIATKVVPASEIWKAIIKSQSETGTPYMLYKDACNEKSNHKHV 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+E+T ETAVCNLASIALP++V DV KN F
Sbjct: 406 GTIKSSNLCTEILEFTDKEETAVCNLASIALPKYV---DV--------------EKNE-F 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ E+L VT +VT NLNK+ID N+YP E +RSN+RHRPIGIGVQGLAD FI+L M F S
Sbjct: 448 NHEELHRVTKMVTRNLNKVIDKNFYPTENGKRSNMRHRPIGIGVQGLADVFIMLRMTFGS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP--SDRW 598
E+++LN DIFETIY+ +L++S E+A GPYET+ SP SKGILQ DMW+ P S R+
Sbjct: 508 EESRKLNIDIFETIYHASLESSCELAEMYGPYETFKGSPFSKGILQFDMWDRDPKFSGRY 567
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +R ++ K G NSLL+APMPTASTSQILGNNECFEPYT+NIY RR L+GEFVVVNK
Sbjct: 568 DWNAMRKLV-KKGTMNSLLLAPMPTASTSQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 626
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
HL++DL E G+WS +K+ ++ +GSVQ I +IP++LK +YKTVWE+ Q T++DMA DRG
Sbjct: 627 HLVNDLKERGLWSKEMKDLMVKANGSVQNIIDIPDDLKELYKTVWEMSQKTIIDMAADRG 686
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
YIDQSQS+N+ ++ P K++S+H W GLKTGMYYLRS+A + I+F+++
Sbjct: 687 VYIDQSQSMNLFVESPTISKLSSMHMYAWKTGLKTGMYYLRSKAKSRPIQFSLE 740
>gi|424032642|ref|ZP_17772059.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-01]
gi|408875700|gb|EKM14844.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-01]
Length = 752
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/771 (54%), Positives = 559/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E DK+T R + L+ GL E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++ T HPDYA LAAR+ VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDIY 107
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ + KN L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRV++ +
Sbjct: 108 VDFVAKNQFALEDMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIY+TLK+CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI FL+L+KNHGKEE RARDLF ALWVPDLFMERV+ + +W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +GAEF + Y YER G K ++A+ L +I+ SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+E ++P ETA CNLAS+ALP+FV + F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDTG--------------------F 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + + F+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA QLN+DI ET+Y+ +L+ S EIAA++G Y +Y SP+S G Q D+W+ PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIVEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + G+W+ I++ II ++GSVQ I IP++L+ +Y+TVWEI Q ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
+ QSQSLN+ + P F ++ ++HF W RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|294660114|ref|XP_462554.2| DEHA2G23276p [Debaryomyces hansenii CBS767]
gi|199434472|emb|CAG91065.2| DEHA2G23276p [Debaryomyces hansenii CBS767]
Length = 861
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/769 (55%), Positives = 558/769 (72%), Gaps = 18/769 (2%)
Query: 17 KITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
K+ L+ L++ L TE+ + KV G+ ++ L EL AE+ A HPD++
Sbjct: 23 KLLHFLENLAFELDTEYISLEEIVNKVIDGLPDLISVKDLLELLAESIATKIIYHPDHSI 82
Query: 77 LAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEII 136
LA R+ NL K T +FS + + N+ + ++G +++D+ ++ +M++ LDS I
Sbjct: 83 LAGRVEAVNLQKMTDYTFSSNVIRLRNYKSNKTGRSYGVVSDEYFKTVMEHKHVLDSIID 142
Query: 137 YDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQR 196
RD + YFG KTL+ SYLLK+ V E PQ M +RV+IGIH DDIDS I+TY +MSQ+
Sbjct: 143 SRRDLELTYFGIKTLQNSYLLKLDNVVSETPQFMFLRVAIGIHGDDIDSVIETYELMSQK 202
Query: 197 WFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIR 256
+F HASPTLFN+GT LSSCFL+ M+DDSI+GIY+TL + A+ISK++GGIG+ VHNIR
Sbjct: 203 YFIHASPTLFNSGTEYNYLSSCFLLAMEDDSIDGIYKTLHKSALISKASGGIGLHVHNIR 262
Query: 257 ATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKK 316
+GSYI +NGTS+G+VPMLRVFN+TARYVDQGG KR GAFA+Y+EPWH DI L+LKK
Sbjct: 263 GSGSYIASSNGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFAIYIEPWHCDIISILDLKK 322
Query: 317 NHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER 376
NHGKEE RARDLFY LW+PDLFMERV+ + WSLF P+ GL+DC+G F+ LY YE
Sbjct: 323 NHGKEEMRARDLFYGLWIPDLFMERVKQDLDWSLFSPDITPGLSDCYGDAFKTLYEKYEE 382
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
GKA + ++AQ LW IL Q ETG PYMLFKD CN KSNQ+NLGTIKSSNLC EIIEY+
Sbjct: 383 SGKAIRTIKAQKLWRAILECQTETGGPYMLFKDACNSKSNQRNLGTIKSSNLCCEIIEYS 442
Query: 437 SPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENL 496
SP ETAVCNL S+ALP F+ + S +DF+KL VT ++ +NL
Sbjct: 443 SPEETAVCNLGSLALPSFI-----------------KNSNELEYDFDKLHTVTKVLAKNL 485
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYY 556
NKIID+ YP+E+A+ SN+R+RPI +GVQGLAD F+ L + F+S +A+ LN IFETIY+
Sbjct: 486 NKIIDITKYPIESAKFSNMRNRPIAVGVQGLADLFLELRLPFDSNQAKVLNTQIFETIYH 545
Query: 557 HALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW-DWGVLRDMISKNGVRNS 615
A++ S E+A K+GPY+T+ SP+S+G+ Q D+WN PS + DW L+ GVRNS
Sbjct: 546 AAVEVSIELAIKDGPYDTFKGSPISEGLFQFDLWNHKPSQLYSDWDELKLKAKTLGVRNS 605
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIK 675
LLVAPMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VVNK+L+ DL ++GIW+ ++K
Sbjct: 606 LLVAPMPTASTSQILGFNECFEPYTSNIYNRRVLSGEFQVVNKYLMKDLIDLGIWNSSMK 665
Query: 676 NKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPN 735
NKII ++GS+Q IP IP+ELK +YKTVWEI Q ++++A DRG +IDQSQS+NIH+ P
Sbjct: 666 NKIILENGSIQNIPSIPKELKQLYKTVWEISQKVIIELAADRGKFIDQSQSMNIHLQDPT 725
Query: 736 FKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPE 784
F K+TS HF W +GLKTGMYYLR++AA AI+FTVD + ++ +PE
Sbjct: 726 FGKLTSSHFYAWEKGLKTGMYYLRTQAATRAIQFTVDLAESRKLDVQPE 774
>gi|312599278|gb|ADQ91301.1| hypothetical protein BpV2_134c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 748
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/774 (55%), Positives = 564/774 (72%), Gaps = 36/774 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR GR E V FD +T R+ KL+ GLS E D ++Q+V + +Y G+ T ++D L+
Sbjct: 1 MRVTKRSGRVEDVKFDNVTNRISKLTEGLS-ETVDVTKIAQQVFSSIYDGIKTPEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE M T+ PDY LA RI SN+ K +F H R KA ++ ++
Sbjct: 60 AEICIGMITSDPDYEILATRITASNIQKRAANNF---------HIAMRKLHKAGIVTHEV 110
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E+ K + +I +RDF++ YFG KTLE+ YL K+ G+++E PQ+M MRV+IGIH
Sbjct: 111 LEVSSK----VKDDIKPERDFEFGYFGLKTLEKGYLQKIDGEIIETPQYMYMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DID ++TY +S+ F HA+PTLFNAGTPRPQ+SSCFL+ K+DSI+GIY+T+KECA
Sbjct: 167 HDIDHVLETYEALSKGLFIHATPTLFNAGTPRPQMSSCFLISNKEDSIDGIYDTVKECAR 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S+IRGTNGTS+GI+PMLRV+N TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGLHIHDVRANKSHIRGTNGTSDGIIPMLRVYNTTARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +FL ++ N G EE R RDLF A+W+PDLFM+RV++ G WSLFCP+ A GL+
Sbjct: 286 LEPWHADILDFLEIRLNQGDEEARCRDLFSAMWIPDLFMKRVESGGNWSLFCPDVARGLS 345
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE+LY YE +G A KVV A +W I+ SQ ETGTPYML+KD CN KSN +++
Sbjct: 346 DVYGKEFEELYEKYEADGIATKVVPASEVWKAIIKSQSETGTPYMLYKDACNEKSNHKHI 405
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLCTEI+EYT ETAVCNLASIALP++V DV + + F
Sbjct: 406 GTIKSSNLCTEIVEYTDKDETAVCNLASIALPKYV---DV---------------EKKEF 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ E+L VT +VT NLNK+ID N+YP E +RSN+RHRPIGIGVQGLAD FI+L M F S
Sbjct: 448 NHEELHRVTKMVTRNLNKVIDKNFYPTENGKRSNMRHRPIGIGVQGLADVFIMLRMTFGS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP--SDRW 598
E+++LN DIFETIY+ +L++S E+A GPYE++ SP SKGILQ DMW+ P S R+
Sbjct: 508 EESRKLNIDIFETIYHASLESSCELAEMYGPYESFKGSPFSKGILQFDMWDRDPKFSGRY 567
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +R+++ K G NSLL+APMPTASTSQILGNNECFEPYT+NIY RR L+GEFVVVNK
Sbjct: 568 DWNAMRELV-KKGTMNSLLLAPMPTASTSQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 626
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
HL++DL E G+WS +K+ ++ +GSVQ I +IP++LK +YKTVWE+ Q T++DMA DRG
Sbjct: 627 HLVNDLKERGLWSKEMKDLMVKANGSVQNIIDIPDDLKELYKTVWEMSQKTIIDMAADRG 686
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
YIDQSQS+N+ ++ P K++S+H W GLKTGMYYLRS+A + I+F+++
Sbjct: 687 VYIDQSQSMNLFVESPTISKLSSMHMYAWKTGLKTGMYYLRSKAKSRPIQFSLE 740
>gi|241958750|ref|XP_002422094.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Candida dubliniensis CD36]
gi|223645439|emb|CAX40095.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Candida dubliniensis CD36]
Length = 816
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/826 (53%), Positives = 567/826 (68%), Gaps = 44/826 (5%)
Query: 8 GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAM 67
G +E KI L++ S+ L D ++ S V G+ +T +L AE A+
Sbjct: 9 GEEEEFDSVKIHKLLEEASFNLGDLDLDQLVES--VQRGLPSTLTIEELYTFIAEVIASR 66
Query: 68 TTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN 127
HP+YA LA RI L+ SFSE ++ + + S +P I+ Y+++ K+
Sbjct: 67 VIYHPNYAILAGRIETRKLYLKVPYSFSENVERLRKYRPRESKSYSP-ISSAFYKVVKKH 125
Query: 128 AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAI 187
D I RD YFG KTLE SYLLK+ G+V E PQ++ MRV+IGIH++D+++ +
Sbjct: 126 GEFFDKVIDKTRDSSLTYFGIKTLESSYLLKMGGEVAELPQYLFMRVAIGIHQNDLNAIV 185
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
+TY +MSQ++F HASPTL+NAG+ LSSCFLV MK+DSI+GI++TL E A+ISK++GG
Sbjct: 186 ETYDLMSQKYFIHASPTLYNAGSEFNYLSSCFLVAMKEDSIDGIFKTLNEAALISKASGG 245
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+ VHNIR+ G+YI GTNG+SNG+VPMLRV+N+TARYVDQGGGKR GAFA+Y+EPWH D
Sbjct: 246 IGIHVHNIRSNGAYIAGTNGSSNGLVPMLRVYNNTARYVDQGGGKRPGAFAIYIEPWHGD 305
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
IF+ L ++KNHG EE R RDLFY LW+PDLFM+RV+ N W+LF PNEA GL+D +G EF
Sbjct: 306 IFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKDNSDWTLFSPNEALGLSDVYGEEF 365
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSN 427
EKLY YE EG KV A LW IL SQ ETG PYML+KD CN KSNQ+N+GTIKSSN
Sbjct: 366 EKLYCKYESEGFGTKV-SAHKLWLAILQSQTETGGPYMLYKDACNTKSNQKNIGTIKSSN 424
Query: 428 LCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAE 487
LC EI+EY+SP ETAVCNLAS+ALP +++ + + FDFEKL
Sbjct: 425 LCCEIVEYSSPEETAVCNLASLALPTYLKTTEDAIA----------------FDFEKLHS 468
Query: 488 VTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLN 547
VT ++T NLNK+IDV YPV+TA SN RHRPI +GVQGLAD F L + F+S A+ LN
Sbjct: 469 VTKVLTRNLNKVIDVTKYPVKTAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLN 528
Query: 548 KDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMI 607
IFETIY+ AL+ S E+A KEGPYET+ SP S GILQ DMWN PS +DW L+D I
Sbjct: 529 IQIFETIYHAALEASVELAMKEGPYETFQGSPASNGILQFDMWNHKPSPMYDWNALKDNI 588
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y+RRVL+GE+ +VNK+L+ DL ++
Sbjct: 589 QNFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYNRRVLAGEYQIVNKYLIKDLMDL 648
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
GIW ++NKII ++GS+QKIP IP+E+K +YKTVWE+ Q ++DMA DRG ++DQSQS+
Sbjct: 649 GIWDSAMRNKIIMENGSIQKIPNIPDEIKQLYKTVWELSQKVIIDMAADRGKFVDQSQSM 708
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS------------- 774
NIH+ P K+TS HF W +GLKTGMYYLR++AA+ AI+FTVD S
Sbjct: 709 NIHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASRAIQFTVDASEAEKAGNKVPQKS 768
Query: 775 -----VFKEKPEK------PELVVDDETKMAQVVCSLTNREECMAC 809
+ +P K P+ + D + C++ + E C +C
Sbjct: 769 LKRKKYMEPQPRKKTAYSTPDSELYDIHDSTPITCNIEDSESCQSC 814
>gi|424046201|ref|ZP_17783764.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-03]
gi|408885458|gb|EKM24175.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-03]
Length = 752
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/771 (54%), Positives = 557/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E DK+T R + L+ GL E P+ V+Q V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQHVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++ T HPDYA LAAR+ VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDAY 107
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ + KN L+ I Y RD+ +DYFG+KTLERSYLLKV+ VVERPQ M MRV++ +
Sbjct: 108 VDFVAKNQFALEEMIDYKRDYQFDYFGYKTLERSYLLKVKRVVVERPQDMFMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIY+TLK+CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI FL+L+KNHGKEE RARDLF ALWVPDLFMERV+ + +W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF + Y YER G K ++A+ L +I+ SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 348 DLYGTEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+E ++P ETA CNLAS+ALP+FV + F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDTG--------------------F 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + + F+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA QLN+DI ET+Y+ +L+ S EIAA++G Y +Y SP+S G LQ D+W PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQLQFDLWGEQPSSRWDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + G+W+ I++ II ++GSVQ I IP++L+ +Y+TVWEI Q ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
+ QSQSLN+ + P F ++ ++HF W RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|448103839|ref|XP_004200138.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
gi|359381560|emb|CCE82019.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
Length = 856
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/775 (55%), Positives = 563/775 (72%), Gaps = 21/775 (2%)
Query: 3 VVKRDGRQEAV----HFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDE 58
VV R GR+E + DK++ L++L++ L +++ + L+ K+ G+ ++T+++
Sbjct: 5 VVVRAGREEIITEDFDRDKLSRFLQRLNFNLDSKYVNIELLVDKIVNGLPDRISTNEIYG 64
Query: 59 LAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
LA+ET A+ NHPD+A LA R+ + L K SFS+ ++ + E L +
Sbjct: 65 LASETIASNVINHPDHAILAGRVVAAKLQKEMGPSFSKNVEKIVAMNKEYQSTSKRLFSS 124
Query: 119 DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI 178
+ + KN LDS + + RDF+ YFG KTLE+SYLL +Q ++ E PQ + +RV+IGI
Sbjct: 125 EFLSTVQKNRDFLDSLVDHSRDFELAYFGIKTLEKSYLLNIQDQICETPQFLFLRVAIGI 184
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
H+DD+++ TY +MS+R+F HASPTLFN+GT LSSCFL+ M DDSI+GIY+TL +
Sbjct: 185 HEDDMEAVATTYDLMSKRYFIHASPTLFNSGTNYNFLSSCFLLAMDDDSIDGIYKTLHKA 244
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK++GGIG+ VHNIR GS I + GTS+G+VPMLRVFN+TARYVDQGG KR GAFA
Sbjct: 245 AMISKASGGIGIHVHNIRGEGSRIASSEGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFA 304
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
+YLEPWH+DIF L LKKNHGKEE RARDLFY LW+PDLFM RV+ N WSLF + A G
Sbjct: 305 IYLEPWHSDIFSVLELKKNHGKEELRARDLFYGLWIPDLFMHRVKENLDWSLFSSDTAPG 364
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L++C+G EF LY YE+E +A KVV+AQ LW IL SQIETG PYML+KD+CN+KSNQ+
Sbjct: 365 LSECYGEEFNALYEKYEKENRAIKVVKAQRLWHAILESQIETGGPYMLYKDSCNQKSNQR 424
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
NLGTIKSSNLC EIIEY+SP ETAVCNL S+ALP F+ ++ V
Sbjct: 425 NLGTIKSSNLCCEIIEYSSPEETAVCNLGSLALPSFINAENDLVT--------------- 469
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
FDF KL EVT ++ +NL+KIIDV YP+ +A+ SN +HRPI IGVQGLAD F+ L + F
Sbjct: 470 -FDFIKLHEVTKVLAKNLDKIIDVTRYPIPSAQVSNKKHRPIAIGVQGLADLFLELRLPF 528
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW 598
+S +A+ LN IFETIY+ A++ S E+A GPY++++ SP+S+G Q DMWN PS +
Sbjct: 529 DSQKAKILNIQIFETIYHAAVEASCELAEMSGPYDSFNGSPMSQGQFQFDMWNHKPSSLF 588
Query: 599 -DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW L++ + K GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VVN
Sbjct: 589 SDWDELKEKVKKAGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYNRRVLSGEFQVVN 648
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
K+LL DL ++GIW+P++KN+I+ ++GS+Q I IP+ +K +YKTVWEI Q +++MA DR
Sbjct: 649 KYLLRDLIDLGIWNPSMKNRILAENGSIQSINSIPQNIKDLYKTVWEISQRVVIEMAADR 708
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
G +IDQSQSLNIH+ P K+TS HF W GLKTGMYYLR++AA AI+FTVD
Sbjct: 709 GKFIDQSQSLNIHLSNPTLGKLTSCHFYAWKNGLKTGMYYLRTQAATRAIQFTVD 763
>gi|299471069|emb|CBN78928.1| ribonucleotide reductase large chain subunit [Ectocarpus
siliculosus]
Length = 653
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/661 (62%), Positives = 518/661 (78%), Gaps = 15/661 (2%)
Query: 153 RSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR 212
RSYLLK GKVVERPQHM+MRVS+GIHKDDID I+TY +MSQR FTHA+PTLFNAGTP+
Sbjct: 6 RSYLLKADGKVVERPQHMIMRVSVGIHKDDIDKVIETYDLMSQRLFTHATPTLFNAGTPK 65
Query: 213 PQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGI 272
PQ+SSCFL+ MK+DSI GIY+TLK+CA ISK AGGIG+S+H++RA SYIRGTNG+SNGI
Sbjct: 66 PQMSSCFLLTMKEDSINGIYDTLKQCAQISKHAGGIGLSIHHVRAANSYIRGTNGSSNGI 125
Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYAL 332
VPMLRVFN+TARYVDQGGGKRKG+ AVYLEPWHADI FL+LKKNHG E RARDLFYA+
Sbjct: 126 VPMLRVFNNTARYVDQGGGKRKGSIAVYLEPWHADIVAFLDLKKNHGNELERARDLFYAM 185
Query: 333 WVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYE-REGKAKKVVQAQNLWF 391
W+PDLFM+RV+ +G W+LFCPNEA GL+D EF++LY YE +EG +++ ++A+ LW
Sbjct: 186 WIPDLFMQRVEADGDWNLFCPNEAPGLSDTHSEEFKELYEQYEAKEGLSRRTMKARLLWD 245
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
IL SQ+ETGTPYML+KD CN KSNQ+NLGTIKSSNLCTEI+EYT+P E AVCNLASI L
Sbjct: 246 AILESQVETGTPYMLYKDACNFKSNQKNLGTIKSSNLCTEIVEYTAPDEVAVCNLASINL 305
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
V +P + ++ +DFEKL ++ +VT NLN++ID NYYP+E AR
Sbjct: 306 SALV----IPPTAETTKAT---------YDFEKLQHISEVVTRNLNRVIDANYYPIEEAR 352
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SN+RHRPIGIGVQGLAD FI + + FES EA +LN+DIFETIY+ A+ S E+A + GP
Sbjct: 353 NSNMRHRPIGIGVQGLADAFIKMRLPFESEEACKLNRDIFETIYFGAVNASVELAKELGP 412
Query: 572 YETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILG 631
YETY SP S+G+LQ D+W V P+ R DW L+ ++++G+RNSLLVAPMPTAST+QILG
Sbjct: 413 YETYAGSPASEGLLQFDLWGVKPTGRHDWAALKARMAEHGLRNSLLVAPMPTASTAQILG 472
Query: 632 NNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEI 691
NNE EP+TSN+Y+RRVL+GEF VVNK+LL DLTE G+W+P ++N+II D GSVQ + +I
Sbjct: 473 NNESVEPFTSNMYNRRVLAGEFTVVNKYLLRDLTERGLWTPEVRNQIIADQGSVQNVRQI 532
Query: 692 PEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGL 751
P+ELK +YKTVWEIKQ +++ A DRG YI QSQS+N+HM + +F K++S+HF W +GL
Sbjct: 533 PQELKDLYKTVWEIKQKFILNQAADRGAYICQSQSMNVHMAEASFGKLSSMHFYAWKKGL 592
Query: 752 KTGMYYLRSRAAADAIKFTVDTSVFK-EKPEKPELVVDDETKMAQVVCSLTNREECMACG 810
KTGMYYLR+R ADAI+FTVD S K + E + + + EC++CG
Sbjct: 593 KTGMYYLRTRPKADAIQFTVDQSSLKVSREEAAKSGAKSGAEGGSAGLEVEEEPECLSCG 652
Query: 811 S 811
+
Sbjct: 653 A 653
>gi|343495112|ref|ZP_08733307.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
nigripulchritudo ATCC 27043]
gi|342823809|gb|EGU58401.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
nigripulchritudo ATCC 27043]
Length = 751
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/771 (53%), Positives = 562/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E DK+T R + L+ GL E P+ V+QKV +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRREKTSLDKVTRRAEALADGLKVE---PIAVAQKVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET+A++ HPDYA LAAR+ VS+L K T+ F + + + ++++D
Sbjct: 58 AETSASLAAEHPDYAKLAARVLVSSLQKETQ-GFQWATEQLS---------EIGILSEDY 107
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ + + I Y RD+ +DYFG+KTLERSYLLKV G +VERPQ M MRV+I +
Sbjct: 108 VAQVRRQGPEIAELIDYRRDYQFDYFGYKTLERSYLLKVDGNIVERPQDMYMRVAIAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI + Y M+S ++THA+PTLFNAG QLSSCFL+ M+DDSI GIY+TLK+CA+
Sbjct: 168 EDIAQIKELYDMLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQDDSISGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRA+G+ I GTNG SNGI+PML+VFN+TARYVDQGGGKRKG+FA+Y
Sbjct: 228 ISKSAGGIGLHIHNIRASGAPIIGTNGISNGIIPMLKVFNETARYVDQGGGKRKGSFAIY 287
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI FL+L+KNHGKEE RARDLF +LWVPDLFMERV+ +G+W+LF + A GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLSLWVPDLFMERVELDGEWTLFSEHNAKGLS 347
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +F LY YEREG K ++A+NL +I+ SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 348 DVYGDDFVALYEKYEREGLGIKTIKARNLMTQIIESQAETGTPYMLYKDSCNIKSNQKNL 407
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+E ++P ETA CNLAS+ALP+ V + F
Sbjct: 408 GTIKSSNLCAEIMEVSTPEETAACNLASLALPKCVIDGQ--------------------F 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KL E+T I +NL+++IDVNY+P + SN HRP+G+G+QGLAD F L +A++S
Sbjct: 448 DFDKLHEITKIAIKNLDRVIDVNYHPTDKIEVSNHAHRPVGLGIQGLADVFFKLHLAYDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN+ I ET+Y+ +L+ SSE+A G Y +Y SP S+G Q D+W+V PSDRWDW
Sbjct: 508 EEARELNRAIAETMYHASLEASSELARDLGAYSSYDGSPASQGTFQFDLWDVQPSDRWDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ +S++G+RNSLL+A MPTAST+QILGN E FE TSNIY R+ LSGEF++VN+HL
Sbjct: 568 NALREQVSQHGLRNSLLIAQMPTASTAQILGNTEAFEAQTSNIYKRQTLSGEFIIVNRHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ L E G+W+P I++ II ++GS+Q+I IPE++K +Y+T+WE+ Q ++DM+ DRG Y
Sbjct: 628 VAALEERGLWTPAIRDSIILNNGSLQEIEAIPEDVKSVYRTIWELSQKVIIDMSADRGPY 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
+ QSQSLN+ + P F ++ ++HF W RGLKTGMYYLR++ +A+A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRTKPSANAVKVTV 738
>gi|397604632|gb|EJK58729.1| hypothetical protein THAOC_21121 [Thalassiosira oceanica]
Length = 966
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/863 (51%), Positives = 586/863 (67%), Gaps = 70/863 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V KRDG + + KI RL KLS GL+ E+ ++ + G Y +TT ++D LA
Sbjct: 122 VFVKKRDGSLDPLSEQKILQRLHKLSSGLNLEYLSLPELTSAIMRGTYPNITTLEIDTLA 181
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
+ETAA+ +T HPDYA LAARI ++ HK T FSE + ++ H N R ++ +
Sbjct: 182 SETAASRSTQHPDYAQLAARICATSNHKQTPAKFSEAMIEL--HDNGRG-----FVSGQL 234
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVV-ERPQHMLMRVSIGIH 179
E+I + +D +I +RD D YFG+KTLER+YLLK +V+ ERP +M MRV++GIH
Sbjct: 235 AELIERRGDEIDEQIRPERDLDLSYFGYKTLERAYLLKDDSEVIRERPSYMWMRVALGIH 294
Query: 180 --------KDD----------------IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQL 215
DD +++A +TYH+MSQ + THASPTLF+AGT PQL
Sbjct: 295 MTRPELDETDDSGTATIKWTKEEEDAHLEAAFETYHLMSQGYCTHASPTLFHAGTTHPQL 354
Query: 216 SSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPM 275
SSCFLV M DDSI+GIY+TLK CAVISK+AGGIG+SV+ IRA G++I+GT G SNG+VPM
Sbjct: 355 SSCFLVQMSDDSIDGIYDTLKRCAVISKAAGGIGLSVNKIRARGTFIKGTRGVSNGLVPM 414
Query: 276 LRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVP 335
LRVF+ T+ YVDQGGGKR GAFA+Y+EPWHADIF+ LNL+KNHGKEE RAR+LFY LWVP
Sbjct: 415 LRVFDSTSHYVDQGGGKRPGAFAIYVEPWHADIFDVLNLRKNHGKEEQRARNLFYGLWVP 474
Query: 336 DLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILT 395
DLFM+RV+ +G WSL CP+E GL +C G +FEKLY YE EG+ K+ ++A+ LW IL
Sbjct: 475 DLFMKRVEEDGVWSLMCPHECPGLGECHGEQFEKLYEKYESEGRHKRQIRARQLWAAILD 534
Query: 396 SQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
+QIETG PY+L+KD N KSNQQNLGTI+SSNLCTEII+YT+ E AVCNLASI L +FV
Sbjct: 535 AQIETGNPYLLYKDAANGKSNQQNLGTIQSSNLCTEIIQYTNEEEVAVCNLASINLSKFV 594
Query: 456 REKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL 515
D V S+ + +FD +L EV VT NL+K+ID+N YPVE A+ SN
Sbjct: 595 -VTDRGVYGSASK------PGDAYFDHGRLHEVAKTVTRNLDKVIDINQYPVEGAKLSNR 647
Query: 516 RHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETY 575
RHRP+GIGV GLAD F+ LG+ F S +A++LN+ IFETIY+ AL+ S+EIAA++G Y ++
Sbjct: 648 RHRPVGIGVSGLADAFLRLGLPFASDDAKELNEAIFETIYHAALEASNEIAAEKGSYSSF 707
Query: 576 HNSPVSKGILQPDMWNV----IPSDR-----------------------WDWGVLRDMIS 608
SP S G LQ ++W V PS R +DW LR I
Sbjct: 708 EGSPASNGELQFNLWGVKDDDTPSQRGKRSGAAQSMKHQRYPDVVAGNGYDWDGLRQRII 767
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
K G+RNSLLVAPMPTASTSQILG NECFEP+ +N+Y RRV +GEF+VVN HL+ DLT+MG
Sbjct: 768 KTGLRNSLLVAPMPTASTSQILGVNECFEPFATNLYVRRVKAGEFIVVNPHLIQDLTDMG 827
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+W+ +++N+++ D GSV I IP+ LK +YKTVWE+K L+DMA DRG +IDQSQSLN
Sbjct: 828 LWNKSVRNQLMRDSGSVANIDCIPDRLKELYKTVWEMKMRDLIDMAADRGRFIDQSQSLN 887
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVD 788
+ P ++T++HF W +GLKTG+YYLR++ A +AI+FTV S+ E +
Sbjct: 888 LFTAAPTVSRLTAMHFYAWRKGLKTGIYYLRTKPAVNAIQFTVSKSIDNESSDNN----G 943
Query: 789 DETKMAQVVCSLTNREECMACGS 811
DE + L + EC++C +
Sbjct: 944 DEQVQNSNLPELGSESECLSCSA 966
>gi|448100140|ref|XP_004199282.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
gi|359380704|emb|CCE82945.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
Length = 856
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/775 (54%), Positives = 562/775 (72%), Gaps = 21/775 (2%)
Query: 3 VVKRDGRQEAV--HFD--KITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDE 58
VV R R+E + FD K+T L++L++ L +++ + L+ K+ G+ ++ S++
Sbjct: 5 VVVRAEREEIITEDFDRVKLTRFLQRLNFDLDSKYVNIELLVDKIVNGLPDRISISEIYG 64
Query: 59 LAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
LA+E+ A+ NHPD+A LA R+ + L K SFS+ ++ + E L +
Sbjct: 65 LASESIASNVINHPDHAVLAGRVVAAKLQKEMGPSFSKNVEKIVAMNKENHSTSKRLFSS 124
Query: 119 DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI 178
+ ++ KN DS + + RD++ YFG KTLE+SYLL +Q ++ E PQ + +RV+IGI
Sbjct: 125 EFLSMVQKNREFFDSLVDHSRDYELAYFGIKTLEKSYLLNIQDQICETPQFLFLRVAIGI 184
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
H DD+++ TY +MS+R+F HASPTLFN+GT LSSCFL+ M DDSI+GIY+TL +
Sbjct: 185 HGDDMEAVATTYDLMSKRYFIHASPTLFNSGTNYNFLSSCFLLAMDDDSIDGIYKTLHKA 244
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK++GGIG+ VHNIR G+ I + GTS+G+VPMLRVFN+TARYVDQGG KR GAFA
Sbjct: 245 AMISKASGGIGIHVHNIRGEGARIASSEGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFA 304
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
+YLEPWH+DIF L LKKNHGKEE RARDLFY LW+PDLFM RV+ N WSLF + A G
Sbjct: 305 IYLEPWHSDIFSLLELKKNHGKEELRARDLFYGLWIPDLFMHRVKENLDWSLFSSDTAPG 364
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L++C+G EF +Y YE+E KA KVV+AQ LW IL SQIETG PYML+KD+CN+KSNQ+
Sbjct: 365 LSECYGEEFNAVYERYEKENKAIKVVKAQRLWHAILESQIETGGPYMLYKDSCNKKSNQR 424
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
NLGTIKSSNLC EIIEY+SP ETAVCNL S+ALP F+ ++ V
Sbjct: 425 NLGTIKSSNLCCEIIEYSSPEETAVCNLGSLALPSFIDAENDLVA--------------- 469
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
FDF KL EVT ++ +NL+KIIDV YP+ +A+ SN++HRPI IGVQGLAD F+ L + F
Sbjct: 470 -FDFVKLHEVTKVLAKNLDKIIDVTRYPIRSAQVSNMKHRPIAIGVQGLADLFLELRLPF 528
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW 598
+S +A+ LN IFETIY+ A++ S E+A GPY++++ SP+S+G Q DMW+ PS +
Sbjct: 529 DSQKAKMLNIQIFETIYHAAIEASCELAESFGPYDSFNGSPMSQGKFQFDMWSHKPSPLF 588
Query: 599 -DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW L++ + K GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VVN
Sbjct: 589 ADWDELKEKVKKTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYNRRVLSGEFQVVN 648
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
K+LL DL ++GIWSP++K++I+ ++GS+Q I IP+ +K +YKTVWEI Q +++MA DR
Sbjct: 649 KYLLRDLIDLGIWSPSMKSRILAENGSIQNIKGIPQNIKDLYKTVWEISQKVVIEMAADR 708
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
G +IDQSQSLNIH+ P K+TS HF W GLKTGMYYLR++AA AI+FTVD
Sbjct: 709 GKFIDQSQSLNIHLSNPTLGKLTSCHFYAWKNGLKTGMYYLRTQAATRAIQFTVD 763
>gi|449482513|ref|XP_002189376.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Taeniopygia guttata]
Length = 819
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/857 (53%), Positives = 567/857 (66%), Gaps = 141/857 (16%)
Query: 8 GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAM 67
GRQE V FDKIT+R+ QK+C G+
Sbjct: 51 GRQERVMFDKITSRI------------------QKLCYGL-------------------- 72
Query: 68 TTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN 127
+ D+ ++D+Y + N +G +P+I+ + +I++ N
Sbjct: 73 ---NADFVDPV-----------------NVMEDLYTYINPHNGKHSPMISKETLDIVLAN 112
Query: 128 AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAI 187
L+S IIYDRDF Y+YFGFKTLERSYLLK+ KV ERPQHMLMRVS+GIHK DID+AI
Sbjct: 113 KDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINSKVAERPQHMLMRVSVGIHKADIDAAI 172
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+CMKDDSIEGIY+TLK+CA+ISKSAGG
Sbjct: 173 ETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCALISKSAGG 232
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH D
Sbjct: 233 IGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLD 292
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
IFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL D WG EF
Sbjct: 293 IFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDDVWGEEF 352
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSN 427
EKLY YER+G+ ++VV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNLGTIK SN
Sbjct: 353 EKLYESYERQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSN 412
Query: 428 LCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAE 487
LCTEI+EYTS E AVCNLASIAL +V P S +DF+KLAE
Sbjct: 413 LCTEIVEYTSREEVAVCNLASIALNMYV----TPEHS---------------YDFKKLAE 453
Query: 488 VTAIVTENLNKIIDVNYYPV--ETARRSNLRHRP------------------------IG 521
VT ++ NLNKIID+NYYPV + R +R P G
Sbjct: 454 VTKVIVRNLNKIIDINYYPVPEDLNRAQFVRGAPHAELSSEETWLPQTPRSPEALPGFWG 513
Query: 522 IGVQGL--ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSP 579
G+ GL ++ G +AQQL +Y +++ +E PY Y +S
Sbjct: 514 SGLTGLRVRCSYERQGRVRRVVKAQQL--------WYAIIESQTETGT---PYMLYKDSC 562
Query: 580 VSKG-------------------------ILQPDMWNVIPSDRWDWGVLRDMISKNGVRN 614
K ILQ DMWNV PSD WDW L++ I+K GVRN
Sbjct: 563 NRKSNQQNLGTIKCSNLCTEIVEYTSREEILQYDMWNVTPSDLWDWKALKEKIAKYGVRN 622
Query: 615 SLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTI 674
SLL++PMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HLL DLTE G+W+ +
Sbjct: 623 SLLISPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHLLKDLTERGLWNEEM 682
Query: 675 KNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQP 734
KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA DRG +IDQSQSLNIH+ +P
Sbjct: 683 KNQIIAHNGSIQNIPEIPDDLKQLYKTVWEISQKTILKMAADRGAFIDQSQSLNIHIAEP 742
Query: 735 NFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMA 794
N+ K+TS+HF W +GLKTGMYYLR++ AA+ I+FT++ +E+ + + E A
Sbjct: 743 NYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLREREKASREEEEKERNKA 802
Query: 795 QVVCSLTNREECMACGS 811
+VCSL NREEC+ CGS
Sbjct: 803 AMVCSLENREECLMCGS 819
>gi|163801386|ref|ZP_02195285.1| hypothetical protein 1103602000598_AND4_10974 [Vibrio sp. AND4]
gi|159174875|gb|EDP59675.1| hypothetical protein AND4_10974 [Vibrio sp. AND4]
Length = 752
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/771 (53%), Positives = 561/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V+KRDGR+E DK+T R + L+ GL E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEMLADGLKVE---PIAVAQRVVSGLYDGIKATEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++ T HPDYA LAAR+ VS+L K T + T +E S + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETNGYAAAT--------SELSEIG--ILSDAY 107
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ +N L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRV++ +
Sbjct: 108 VNFVARNQLALEDMIDYKRDYQFDYFGYKTLERSYLLKVKGAVVERPQDMFMRVAVVVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI+GIY+TLK+CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSIDGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGI+PML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIIPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI FL+L+KNHGKEE RARDLF ALWVPDLFM+RV+ + +W+LF P+ L+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMQRVENDAEWTLFSPHNTKDLS 347
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G+EF + Y YER G K ++A+ L +I+ SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 348 ELYGSEFNRKYQEYERIGLGVKTIKARQLMTKIIESQTETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+E ++P ETA CNLAS+ALP+FV + F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASVALPKFVTDTG--------------------F 447
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL +VT + +NL+++IDVNY+P +SN HRP+G+G+QGLAD F + + F+S
Sbjct: 448 DFEKLHQVTKVAIKNLDRVIDVNYHPTNKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+DI ET+Y+ +L+ S EIA ++G Y +Y SP+S+G+ Q D+W PS RWDW
Sbjct: 508 KEALHLNRDIAETMYHASLEASCEIAKQKGTYSSYDGSPISQGLFQFDLWGKQPSSRWDW 567
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSN+Y R+ LSGEF+++NKHL
Sbjct: 568 SQLKLKIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNLYKRQTLSGEFIILNKHL 627
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL + G+W+ I++ I+ ++GSVQ I IP++L+ +Y+TVWEI Q ++DM+ +R +
Sbjct: 628 VRDLEKNGLWTSKIRDAILLNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAERAPF 687
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
+ QSQSLN+ + P F ++ ++HF W RGLKTGMYYLRS+ +A+A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSANAVKVTV 738
>gi|255721743|ref|XP_002545806.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
gi|240136295|gb|EER35848.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
Length = 818
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/817 (52%), Positives = 564/817 (69%), Gaps = 43/817 (5%)
Query: 17 KITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
K+ L++LS+ L D VL S V G+ VT QL AE A+ +PDYA
Sbjct: 19 KVLKLLQELSFNLENLQLDDVLES--VQKGLPATVTVYQLYTFIAEVIASRIIYNPDYAI 76
Query: 77 LAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEII 136
LA R+ + L+ +FS+ ++ + N+ + + +P I+ YE++ K+ D I
Sbjct: 77 LAGRVELRKLYLKVPYNFSDNVERLRNYKSHGAKSYSP-ISSKFYEVVKKHKEFFDGLID 135
Query: 137 YDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQR 196
RD ++ YFG KTLE SYLLK+ + E PQ + +RV+IGIH +D+ S +TY +MS++
Sbjct: 136 KSRDDEFTYFGIKTLENSYLLKIDSEPAELPQFLFLRVAIGIHLEDLGSVAETYDLMSKK 195
Query: 197 WFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIR 256
+F HASPTL+NAG LSSCFL+ MKDDSI+GIY+TL E A+ISK++GGIG+ VH +R
Sbjct: 196 YFIHASPTLYNAGGEFNYLSSCFLIAMKDDSIDGIYKTLHESALISKASGGIGIHVHEVR 255
Query: 257 ATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKK 316
+ GSYI GTNG +NG+VPMLRVFN+TARYVDQGGGKR GAFA+Y+EPWH DIF+ L ++K
Sbjct: 256 SNGSYIAGTNGIANGLVPMLRVFNNTARYVDQGGGKRPGAFAIYIEPWHGDIFDILEMRK 315
Query: 317 NHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER 376
NHG EE R RDLFY LW+PDLFM+RV+ + W+L P+EA GL+D +G +F++LY YE+
Sbjct: 316 NHGSEELRTRDLFYGLWIPDLFMQRVKADEYWTLMSPSEAPGLSDVYGDDFKELYEKYEK 375
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
+G K+ +A LW IL SQ ETG PYML+KD CN KSNQ+NLGTIKSSNLC EI+EY+
Sbjct: 376 QGLGTKI-RAHKLWLAILESQTETGGPYMLYKDACNEKSNQKNLGTIKSSNLCCEIVEYS 434
Query: 437 SPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENL 496
SP ETAVCNL S+ALP +++ D V FDFEKL VT ++ +NL
Sbjct: 435 SPEETAVCNLGSLALPTYLKTSDDEVIE---------------FDFEKLHSVTKVLAKNL 479
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYY 556
NK+IDV YPVETA SN R+RPI +GVQGLAD F L + FES A++LN IFETIY+
Sbjct: 480 NKVIDVTLYPVETAEYSNKRNRPIALGVQGLADLFAELRLPFESEAARKLNIQIFETIYH 539
Query: 557 HALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSL 616
AL+ S E++ ++GPYET+ SP S+GILQ DMWN PS +DW L++ I K G+RNSL
Sbjct: 540 AALEASVELSIQDGPYETFQGSPASEGILQFDMWNHTPSKMYDWNKLKESIQKFGLRNSL 599
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKN 676
LVAPMPTASTSQILG NECFEPYTSN+Y+RRVLSGEF VVNK+L+ DL ++GIW+ ++N
Sbjct: 600 LVAPMPTASTSQILGFNECFEPYTSNLYNRRVLSGEFQVVNKYLIKDLMDLGIWNSAMRN 659
Query: 677 KIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNF 736
KI+ ++GS+Q I IP+++K +YKTVWEI Q ++DMA DRG +IDQSQS+NIH+ +P F
Sbjct: 660 KIMMENGSIQNIQSIPKDIKELYKTVWEISQKVIIDMAADRGKFIDQSQSMNIHLREPTF 719
Query: 737 KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS----VFKEKPE----------- 781
K+TS HF W +GLKTGMYYLR++AA+ AI+FTVD + EKP
Sbjct: 720 GKLTSCHFYAWKQGLKTGMYYLRTQAASRAIQFTVDATEAEKAANEKPRGSLKRKKYLET 779
Query: 782 ---------KPELVVDDETKMAQVVCSLTNREECMAC 809
P+ V D + C++ + E C +C
Sbjct: 780 PPRKKTVYSTPDSEVYDIHDSTPITCNIEDSESCQSC 816
>gi|344303891|gb|EGW34140.1| hypothetical protein SPAPADRAFT_49208 [Spathaspora passalidarum
NRRL Y-27907]
Length = 843
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/759 (54%), Positives = 552/759 (72%), Gaps = 13/759 (1%)
Query: 16 DKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYA 75
DK+ L+ L + L T+H + V + G+ + +L E AE A+ HPDYA
Sbjct: 24 DKLLELLQNLCFNLDTDHLELEAVVSDIARGLPDRIEIEKLYEFVAEALASRIVYHPDYA 83
Query: 76 SLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKA-PLIADDIYEIIMKNAACLDSE 134
LA RI + +FSE +K + + + R + ++++ +++MK+AA D
Sbjct: 84 ILAGRIEIKKFDSIVPYTFSENVKRLQAYRHPRVKNRPYSMLSEKYCDVVMKHAAFFDEV 143
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMS 194
I RD + YFG KTLE SYLL++ ++ E PQ++ +RV+IGIH DD++S ++TY +MS
Sbjct: 144 IDKSRDNELTYFGIKTLENSYLLQMNNQIAETPQYLFLRVAIGIHFDDLESVVETYDLMS 203
Query: 195 QRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHN 254
Q++ HASPTL+N+GT LSSCFL+ +K+DSI+GIY+TL + A+ISK++GGIG+ +H+
Sbjct: 204 QKYLIHASPTLYNSGTEFNYLSSCFLLAVKEDSIDGIYKTLHQAALISKASGGIGIHMHD 263
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNL 314
+RA GS+I T+G SNG+VPMLRVFN+TARYVDQGGGKR GAFA+Y+EPWHADIF+ L++
Sbjct: 264 VRANGSFIASTSGISNGLVPMLRVFNNTARYVDQGGGKRPGAFAMYIEPWHADIFDILDM 323
Query: 315 KKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHY 374
+KNHG EE R RDLFY LWVPDLFM+RV+ + +WSLF P+EA GL+D +G EF +LY Y
Sbjct: 324 RKNHGNEEQRTRDLFYGLWVPDLFMKRVKEDKEWSLFSPDEAPGLSDVYGDEFVELYEKY 383
Query: 375 EREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIE 434
EREG A ++A LW IL SQ ETG PYML+KD CN KSNQ+NLGTIK SNLC EII+
Sbjct: 384 EREGLAISTIKAHKLWLAILESQTETGVPYMLYKDACNSKSNQKNLGTIKCSNLCCEIIQ 443
Query: 435 YTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTE 494
Y+SP ETAVCN+ S+ALP +++ + G + FDF KL +V ++ +
Sbjct: 444 YSSPEETAVCNIGSLALPSYLKTAE-----------NRAGEEVLEFDFVKLHKVAKVLVK 492
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETI 554
NLNK+IDV YPV +A SN +HRPI IGVQGLAD F+ L + F+SP+A+ LN IFETI
Sbjct: 493 NLNKVIDVTRYPVPSAELSNKKHRPIAIGVQGLADLFLELRLPFDSPQAKHLNMQIFETI 552
Query: 555 YYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW-DWGVLRDMISKNGVR 613
Y+ A++ S+E+A +EGPYE++ SP S+G+LQ D+WN PS + DW L++ I G+R
Sbjct: 553 YHAAIEQSTELAFQEGPYESFEGSPASQGLLQFDLWNHKPSPLYDDWDTLKENIKNFGLR 612
Query: 614 NSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPT 673
NSLLV PMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VVNK+L+ DL ++GIW+ +
Sbjct: 613 NSLLVGPMPTASTSQILGFNECFEPYTSNIYTRRVLSGEFQVVNKYLIKDLIDLGIWNSS 672
Query: 674 IKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQ 733
++NKII ++GS+Q I IP+E+K +YKTVWEI Q ++DMA DRG ++DQSQS+NI++ Q
Sbjct: 673 MRNKIIMENGSIQNIASIPQEIKDLYKTVWEISQRVIIDMAADRGKFVDQSQSMNIYLKQ 732
Query: 734 PNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
P F K+TS HF W +GLKTGMYYLR++AA AI+FTVD
Sbjct: 733 PTFGKLTSCHFYAWEKGLKTGMYYLRTQAATRAIQFTVD 771
>gi|190347674|gb|EDK39996.2| hypothetical protein PGUG_04094 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/756 (56%), Positives = 551/756 (72%), Gaps = 32/756 (4%)
Query: 17 KITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
++ + L LSY L EH D V V AG+ +T L L AE+ A+ TT++PDY
Sbjct: 31 RLRSLLDTLSYELDIEHLDLDDVVDSVAAGLPATITVDDLLLLTAESLASRTTSYPDYGV 90
Query: 77 LAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEII 136
LA R+ ++ + K+ + SFS I + + + ++ + + KNA +D I
Sbjct: 91 LAGRVEMTKIQKSAENSFSANIAKI-------AKIAPNTLSSQLVSVAEKNAEKIDGAID 143
Query: 137 YDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQR 196
+ RD++ YF KTL++SYLL E PQ+M MRVS+GIH D++SAI+TY MSQ+
Sbjct: 144 HRRDYELSYFAVKTLQKSYLLVGS----ETPQYMFMRVSLGIHGQDVNSAIETYTYMSQK 199
Query: 197 WFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIR 256
+F HASPTLFN+GT LSSCFL+ MK+DSI+GIY+TL E A+ISK++GGIG+ VHNIR
Sbjct: 200 YFIHASPTLFNSGTNYNHLSSCFLLAMKEDSIDGIYKTLHETALISKASGGIGLHVHNIR 259
Query: 257 ATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKK 316
A+GS I ++GTS+G+VPMLRVFN+TARYVDQGG KR GAFA+YLEPWHADIFE L+LKK
Sbjct: 260 ASGSRIASSSGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHADIFEVLDLKK 319
Query: 317 NHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER 376
NHGKEE RARDLFYALW+PDLFMERV+ + QWS F P++A GL +C+G EF++LY YE
Sbjct: 320 NHGKEEMRARDLFYALWIPDLFMERVRNDEQWSCFSPDQAPGLENCYGEEFKRLYESYEA 379
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
+G A KVV+AQ LW IL SQIETG PYML+KD CN KSNQ+NLGTIKSSNLC E+++Y+
Sbjct: 380 KGLAMKVVRAQKLWDAILDSQIETGGPYMLYKDACNEKSNQKNLGTIKSSNLCCEVVQYS 439
Query: 437 SPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENL 496
SP E AVCNL S+ALP FV KN FD + L +VT ++ NL
Sbjct: 440 SPDEVAVCNLGSVALPMFV--------------------KNDNFDSQLLHKVTKVLVNNL 479
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYY 556
NK+IDV YP+E+AR SN +HRPI +GVQGLAD F+ L + F+SP A++LN +FETIY+
Sbjct: 480 NKVIDVTAYPLESARISNKKHRPIAVGVQGLADLFLKLELPFDSPRARELNIQVFETIYH 539
Query: 557 HALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW-DWGVLRDMISKNGVRNS 615
A++ S E+A K+GPYET+ SP SKG+LQ D+WN PSD + DW L+ + K+G+RNS
Sbjct: 540 AAVEASVELAIKDGPYETFAGSPASKGLLQFDLWNHKPSDLYTDWDELKQKVVKSGMRNS 599
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIK 675
LLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVNK+L+ LTE+ +W+ +K
Sbjct: 600 LLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVNKYLVKKLTELNLWNKQMK 659
Query: 676 NKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPN 735
++I+ GSV I EIP+ ++ ++KTVW+I Q T++DMAVDR +IDQSQSLNIHM P
Sbjct: 660 DRILVAGGSVMNIDEIPQHVRDVFKTVWDISQRTIIDMAVDRAKFIDQSQSLNIHMRNPT 719
Query: 736 FKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
K+TS HF W +GLKTG+YYLR+++A+ AI+FTV
Sbjct: 720 KSKLTSCHFYAWKQGLKTGLYYLRTQSASRAIQFTV 755
>gi|358399605|gb|EHK48942.1| hypothetical protein TRIATDRAFT_297700 [Trichoderma atroviride IMI
206040]
Length = 733
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/608 (65%), Positives = 487/608 (80%), Gaps = 18/608 (2%)
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
M+MRV++G+ D+I+ ++TYH+MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIE
Sbjct: 1 MIMRVAVGVWGDNIERVLETYHLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIE 60
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIY+TLK CA+ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQG
Sbjct: 61 GIYDTLKTCAMISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQG 120
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G KR GAFA+YLEPWHAD+FEFL+L+KNHGKEE RARDLF ALW+PDLFM+RV+ N W+
Sbjct: 121 GNKRPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNLDWT 180
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
L CPNE GLADC+G EFE LY YE+EGK +K ++AQ LW+ IL +Q ETG P+ML+KD
Sbjct: 181 LMCPNECPGLADCYGEEFEALYEKYEKEGKGRKTIRAQKLWYSILEAQTETGNPFMLYKD 240
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CNRKSNQ+NLGTI+SSNLCTEI+EY++P E AVCNLAS+ALP FV +
Sbjct: 241 ACNRKSNQKNLGTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAFVDYNE---------- 290
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
+DF+KL +VT +V NLN+IIDVNYYPV+ AR SN RHRPIG+GVQGLAD
Sbjct: 291 --------GCYDFKKLHDVTKVVVRNLNRIIDVNYYPVQEARNSNSRHRPIGVGVQGLAD 342
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F+ L + FESPEA++LNK IFETIY+ AL+ S EIA EGPYE++ SP S+GILQ D+
Sbjct: 343 AFLALRLPFESPEARELNKQIFETIYHAALEASMEIAKIEGPYESFKGSPASEGILQFDL 402
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W+V P+D W+W L++ I ++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL
Sbjct: 403 WDVKPTDLWEWDSLKEQIKEHGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVL 462
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN LL DL + G+WS +KN+II ++GS+Q IP IP ++K +YKTVWEI Q
Sbjct: 463 AGEFQVVNPWLLKDLVDTGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRH 522
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
+V M+ DRG +IDQSQSLNIHM P K+TS+HF W GLKTGMYYLR++AAA I+F
Sbjct: 523 IVQMSADRGAFIDQSQSLNIHMKDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAAPIQF 582
Query: 770 TVDTSVFK 777
TVD K
Sbjct: 583 TVDQEALK 590
>gi|354546080|emb|CCE42809.1| hypothetical protein CPAR2_204520 [Candida parapsilosis]
Length = 832
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/749 (55%), Positives = 538/749 (71%), Gaps = 17/749 (2%)
Query: 24 KLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAV 83
+ +GL T + + + AG+ +T ++ A+E A+ +HPDYA LA R+
Sbjct: 34 RFCHGLDTSYIKLDDIVTSILAGLPDKITIHEIYNFASEVIASRVIHHPDYAILAGRMVS 93
Query: 84 SNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDY 143
L FSE I+ + + N R G ++D+ YEI+MK+ D I +
Sbjct: 94 HLLQLQVPYRFSENIQRLKDTTNSR-GEPYSQMSDNFYEIVMKHREEFDGIIKKTEKIEL 152
Query: 144 DYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASP 203
YFG KTLE SYL + K+ E P++M +RV+I IH+DDI + +TY +MSQ++F HASP
Sbjct: 153 AYFGIKTLENSYLWRTGNKIAETPEYMFLRVAIEIHQDDIQAVEETYVLMSQKYFIHASP 212
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TL+NAG LSSCFL+ MKDDSI+GIY+TL E A+ISK++GGIG+ +HNIRA GS+I
Sbjct: 213 TLYNAGCAYNYLSSCFLLAMKDDSIDGIYQTLHEAALISKASGGIGIHIHNIRAQGSHIA 272
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
TNG + G+VPMLRVFN+TARYVDQGGGKR GAFA+YLEPWHAD+FE LN++KNHG EE
Sbjct: 273 STNGRAGGVVPMLRVFNNTARYVDQGGGKRPGAFAIYLEPWHADVFEILNMRKNHGNEEF 332
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R RDLFY LW+PDLFM+RV++ G WSLF P+ A GL+D +G+EF +LY YE +G A
Sbjct: 333 RTRDLFYGLWIPDLFMQRVKSGGDWSLFSPDVAPGLSDVYGSEFIELYEKYEAQGLASAT 392
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAV 443
++AQ LW IL SQ ETG PYML+KD CN+K+NQ NLGTIKSSNLC EI+EY+SP+ETAV
Sbjct: 393 IKAQKLWLAILESQTETGGPYMLYKDACNQKTNQSNLGTIKSSNLCCEIVEYSSPSETAV 452
Query: 444 CNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVN 503
CNLAS+ LP F++ + +E FDF+KL VT +VT NLNK+IDV
Sbjct: 453 CNLASLGLPSFLQSTEDSIE----------------FDFDKLHSVTKVVTRNLNKVIDVT 496
Query: 504 YYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSS 563
YPV +A RSN ++RPI IGVQGLAD F+ L + F+S EA++LN IFETIY+ A++ S
Sbjct: 497 RYPVNSAERSNKKNRPIAIGVQGLADLFLELRLPFDSLEAKKLNSQIFETIYHAAVEASL 556
Query: 564 EIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPT 623
E++ EGPY T+ SP S+ ILQ DMWN P DW L+D + +G+RNSLLVAPMPT
Sbjct: 557 ELSILEGPYSTFAGSPASQDILQFDMWNQKPEFYDDWDQLKDNVRSHGLRNSLLVAPMPT 616
Query: 624 ASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDG 683
ASTSQILG NECFEPYTSN+Y+RRV+SGEF VVNK+L+ DL ++GIW+ +++KII D G
Sbjct: 617 ASTSQILGFNECFEPYTSNLYTRRVISGEFQVVNKYLIRDLVDLGIWNSALRSKIIQDGG 676
Query: 684 SVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLH 743
S+Q IP IP +++ +Y+TVWE+KQ ++DMA DRG +IDQSQS+NI+M P K+TS H
Sbjct: 677 SIQNIPVIPGDIRKLYRTVWELKQKDIIDMAADRGKFIDQSQSMNIYMSNPTIGKLTSCH 736
Query: 744 FRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
F W +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 737 FHAWEKGLKTGMYYLRTQAAARAIQFTVD 765
>gi|424037730|ref|ZP_17776455.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-02]
gi|408895211|gb|EKM31675.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-02]
Length = 735
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/754 (53%), Positives = 547/754 (72%), Gaps = 33/754 (4%)
Query: 18 ITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
+T R + L+ GL E P+ V+Q+V +G+Y G+ +++D AETAA++ T HPDYA L
Sbjct: 1 MTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFLAETAASLATEHPDYAKL 57
Query: 78 AARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIY 137
AAR+ VS+L K T ++ +D+ + +++D + + KN L+ I Y
Sbjct: 58 AARVMVSSLQKETS-GYATATRDLS---------EIGILSDVYVDFVAKNQFALEDMIDY 107
Query: 138 DRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRW 197
RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRV++ + DD++ + Y ++S +
Sbjct: 108 KRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAGDDLEEIRELYDLLSLGY 167
Query: 198 FTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRA 257
+THA+PTLFNAG QLSSCFL+ M++DSI GIY+TLK+CA+ISKSAGGIG+ +HNIRA
Sbjct: 168 YTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCALISKSAGGIGLHIHNIRA 227
Query: 258 TGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKN 317
TG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVYLEPWHADI FL+L+KN
Sbjct: 228 TGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVYLEPWHADIESFLDLRKN 287
Query: 318 HGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYERE 377
HGKEE RARDLF ALWVPDLFMERV+ + +W+LF P+ GL+D +GAEF + Y YE
Sbjct: 288 HGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLSDLYGAEFTQKYQEYECM 347
Query: 378 GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTS 437
G K ++A+ L +I+ SQ ETGTPYML+KD CN KSNQ+NLGTIKSSNLC EI+E ++
Sbjct: 348 GLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNLGTIKSSNLCAEIMEVST 407
Query: 438 PTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
P ETA CNLAS+ALP+FV + FDF+KL +VT + +NL+
Sbjct: 408 PDETAACNLASMALPKFVTDTG--------------------FDFDKLHQVTKVAIKNLD 447
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
++IDVNY+P + +SN HRP+G+G+QGLAD F + + F+S EA QLN+DI ET+Y+
Sbjct: 448 RVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDSEEALQLNRDIAETMYHA 507
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLL 617
+L+ S EIAA++G Y +Y SP+S G Q D+W PS RWDW L+ I+ +GVRNSLL
Sbjct: 508 SLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWGEQPSSRWDWSQLKRQIAAHGVRNSLL 567
Query: 618 VAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNK 677
+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL+ DL + G+W+ I++
Sbjct: 568 IAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHLVSDLEQRGLWTSKIRDA 627
Query: 678 IIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFK 737
II ++GSVQ I IP++L+ +Y+TVWEI Q ++DM+ R ++ QSQSLN+ + P F
Sbjct: 628 IILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPFVCQSQSLNLWLASPTFA 687
Query: 738 KVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++ ++HF W RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 QINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 721
>gi|344229874|gb|EGV61759.1| ribonucleoside-diphosphate reductase large chain [Candida tenuis
ATCC 10573]
Length = 816
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/752 (55%), Positives = 546/752 (72%), Gaps = 17/752 (2%)
Query: 22 LKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI 81
LK L GL E D + K+ + T ++L E AE+ AA TT+HPDY+ LA R+
Sbjct: 2 LKWLQRGLRLELSDLDEILDKIALSMADKTTVNELLEYTAESLAARTTSHPDYSLLAGRV 61
Query: 82 AVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDF 141
L K SFS+++ +Y +Y+ ++ P ++ +Y++ MKN LD+ + +RD
Sbjct: 62 EAVKLQKMVSNSFSDSMSKLYYNYHPKTNKHTPSVSKQVYDVAMKNRDVLDTAVESERDL 121
Query: 142 DYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHA 201
YFG KTLERSYL+KV E PQ++ MRV++GIH D++ AI+TY++MS+++ HA
Sbjct: 122 TISYFGIKTLERSYLIKVNEIPTETPQYLFMRVALGIHGGDVEDAIETYNLMSKKYIMHA 181
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
SPTLF+AGT LSSCFL+ M+DDSI+GIY+TL + A+ISK++GGIG+ +HN+RA GS
Sbjct: 182 SPTLFSAGTDYNFLSSCFLLAMEDDSIDGIYKTLHKAALISKASGGIGLHIHNVRARGSL 241
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
+ + G S+G+VPMLRVFNDTARYVDQGG KR GAFAV+LEPWH D+FE L+L+KN+GKE
Sbjct: 242 VSTSGGKSSGLVPMLRVFNDTARYVDQGGNKRPGAFAVFLEPWHTDVFEVLDLRKNYGKE 301
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAK 381
E RARDLFY LW+PDLFM++V+ + W LF P+ + GL+DC+G EF+ LY YER G A
Sbjct: 302 ELRARDLFYGLWIPDLFMQKVKDDEDWCLFSPDVSPGLSDCYGDEFKALYEKYERAGDAV 361
Query: 382 KVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTET 441
+VV+AQ LW IL SQ ETG PYM++KD CN KSNQ+NLGTIKSSNLC EI+EY+S ET
Sbjct: 362 RVVKAQKLWQSILESQTETGGPYMMYKDACNTKSNQKNLGTIKSSNLCCEIVEYSSKEET 421
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ALP FV E + F+F KL EVT ++ +NL+KI+D
Sbjct: 422 AVCNLGSLALPSFVNEDKDSIS----------------FNFMKLHEVTKVLGKNLDKIVD 465
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+ YP E A SN +HRPI IGVQGLAD F LL + FES EA++LN IFETIY+ A++
Sbjct: 466 ITRYPDEGAETSNRKHRPIAIGVQGLADVFALLRIPFESKEAKKLNIQIFETIYHAAVEG 525
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW-DWGVLRDMISKNGVRNSLLVAP 620
S E+A K G YET+ SP S+G+LQ D WN PSD + DW L++ + G+RNSLLV P
Sbjct: 526 SIELAKKHGAYETFKGSPASQGMLQFDFWNHKPSDLFDDWNDLKENMMVYGLRNSLLVGP 585
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
MPTASTSQILG NECFEP+TSNIYSRRV SGEF VVNK+L++DL E+G+W+ +K+KI+
Sbjct: 586 MPTASTSQILGFNECFEPFTSNIYSRRVTSGEFQVVNKYLINDLIELGLWNQDLKDKILL 645
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
+GSVQ IPEIP E+K +YKTVWEI Q +++MA DRG ++DQSQS+NI+M P + K+T
Sbjct: 646 AEGSVQGIPEIPVEIKELYKTVWEISQKVILEMAADRGRFVDQSQSMNIYMKNPTYSKLT 705
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
S HF +W GLKTGMYYLR++AA+ AI+FT++
Sbjct: 706 SCHFYSWKLGLKTGMYYLRTQAASRAIQFTIE 737
>gi|422933896|ref|YP_007003955.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 2]
gi|386686209|gb|AFJ20561.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 2]
Length = 824
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/782 (54%), Positives = 558/782 (71%), Gaps = 24/782 (3%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YVVKR G+ +A+ K+ R++ Y S++ +P+ V++KV AG+ G TS +D L A
Sbjct: 14 YVVKRSGQTQAIDIQKVADRIENCGY--SSKIVNPLQVAKKVEAGIGNGFKTSAIDVLLA 71
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
+T A+MTT HPDY LA+RIAVSNLHK T +FS+ + +Y++ N + APL+++ +
Sbjct: 72 QTLASMTTVHPDYGILASRIAVSNLHKQTPDTFSDAMWQLYHNVNPDTKENAPLVSERFF 131
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
E+ +K+ + LD+ +++ RDFD +YFGFKTLE+SYLL VERPQ+M MR ++ IH D
Sbjct: 132 ELSVKHKSELDAAVVHGRDFDLNYFGFKTLEKSYLLSSSKGPVERPQYMYMRCAMQIHGD 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
+I ++TY +MS+ +FTHASPTLFNA + + Q+SSCFL+ +K+DS+EGI +TLK CA+I
Sbjct: 192 NIARVVETYDLMSRGYFTHASPTLFNACSTKSQMSSCFLLNVKEDSMEGIMDTLKSCAMI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK AGGIG+S N+RA G+YI+GTNG SNG+VP LR+FN R VDQGG KR GA AVYL
Sbjct: 252 SKHAGGIGMSASNLRAGGAYIKGTNGRSNGLVPTLRIFNALERMVDQGGNKRPGALAVYL 311
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWHADIFEFL+L+KN+G EE R RDLF ALW+PDLFM+RV+ N WSL CP GL +
Sbjct: 312 EPWHADIFEFLDLRKNNGVEEQRTRDLFQALWIPDLFMQRVKDNKHWSLMCPARCPGLDE 371
Query: 362 CWGAEFEKLYTHYER-EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+G +F+ LYT YE+ EG K+ V A+ LW +IL +Q+ETG P+ML+KD NRKSN +L
Sbjct: 372 AYGEKFDMLYTGYEKTEGAVKRTVSARELWDKILVAQLETGGPFMLYKDAANRKSNHNHL 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEII+YT+ E AVCNLAS+AL FV P+ + F
Sbjct: 432 GTIKCSNLCTEIIQYTNKDEVAVCNLASVALNAFVE----PLHDGGELV----------F 477
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
+ +KL EV ++T NLN +IDVN+YPV A SN RHRPIGIGVQGLAD F +L M F S
Sbjct: 478 NHQKLTEVVKVITLNLNNLIDVNFYPVPEAAASNRRHRPIGIGVQGLADVFQMLRMPFTS 537
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---R 597
PEA++LNK IFETIY+ AL S A GPYE+Y SPVSKG+LQ DMW + D
Sbjct: 538 PEAKRLNKMIFETIYHAALTQSCAQAELYGPYESYDGSPVSKGLLQFDMWGLSERDLGGH 597
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW LR I++ G+RNSLLVAPMPTAST+QILGNNE EP+TSN+Y RRVLSG+F VVN
Sbjct: 598 CDWNTLRKSINRFGLRNSLLVAPMPTASTAQILGNNESIEPFTSNLYQRRVLSGDFQVVN 657
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
KH++ L E G+W+ ++ +++ + GSVQ I P ELK ++KT +E+ Q L+DMA DR
Sbjct: 658 KHMVKVLEERGLWTDEMRTELLVNKGSVQAIASFPSELKDVFKTAYELPQKDLIDMAADR 717
Query: 718 GCYIDQSQSLNIHM--DQPNF--KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT 773
++DQSQSLN+ + + P+ KK+T +H WSRGLKTGMYYLR++AA ++F+V
Sbjct: 718 APFVDQSQSLNLFLCENDPDLKMKKLTRMHMHAWSRGLKTGMYYLRTKAAVAPVQFSVAP 777
Query: 774 SV 775
V
Sbjct: 778 EV 779
>gi|146414790|ref|XP_001483365.1| hypothetical protein PGUG_04094 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/756 (55%), Positives = 548/756 (72%), Gaps = 32/756 (4%)
Query: 17 KITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
++ + L LSY L EH D V V AG+ +T L L AE+ A+ TT++PDY
Sbjct: 31 RLRSLLDTLSYELDIEHLDLDDVVDSVAAGLPATITVDDLLLLTAESLASRTTSYPDYGV 90
Query: 77 LAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEII 136
LA R+ ++ + K + FS I + + + ++ + + KNA +D I
Sbjct: 91 LAGRVEMTKIQKLAENLFSANIAKI-------AKIAPNTLSSQLVSVAEKNAEKIDGAID 143
Query: 137 YDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQR 196
+ RD++ YF KTL++SYLL E PQ+M MRVS+GIH D++SAI+TY MSQ+
Sbjct: 144 HRRDYELSYFAVKTLQKSYLLVGS----ETPQYMFMRVSLGIHGQDVNSAIETYTYMSQK 199
Query: 197 WFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIR 256
+F HASPTLFN+GT LSSCFL+ MK+DSI+GIY+TL E A+ISK++GGIG+ VHNIR
Sbjct: 200 YFIHASPTLFNSGTNYNHLSSCFLLAMKEDSIDGIYKTLHETALISKASGGIGLHVHNIR 259
Query: 257 ATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKK 316
A+GS I ++GTS+G+VPMLRVFN+TARYVDQGG KR GAFA+YLEPWHADIFE L+LKK
Sbjct: 260 ASGSRIASSSGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHADIFEVLDLKK 319
Query: 317 NHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER 376
NHGKEE RARDLFYALW+PDLFMERV+ + QWS F P++A GL +C+G EF++LY YE
Sbjct: 320 NHGKEEMRARDLFYALWIPDLFMERVRNDEQWSCFSPDQAPGLENCYGEEFKRLYESYEA 379
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
+G A KVV+AQ LW IL SQIETG PYML+KD CN KSNQ+NLGTIKSSNLC E+++Y+
Sbjct: 380 KGLAMKVVRAQKLWDAILDSQIETGGPYMLYKDACNEKSNQKNLGTIKSSNLCCEVVQYS 439
Query: 437 SPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENL 496
SP E AVCNL S+ALP FV KN FD + L +VT ++ NL
Sbjct: 440 SPDEVAVCNLGSVALPMFV--------------------KNDNFDSQLLHKVTKVLVNNL 479
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYY 556
NK+IDV YP+E+AR SN +HRPI +GVQGLAD F+ L + F+SP A++LN +FETIY+
Sbjct: 480 NKVIDVTAYPLESARISNKKHRPIAVGVQGLADLFLKLELPFDSPRARELNIQVFETIYH 539
Query: 557 HALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW-DWGVLRDMISKNGVRNS 615
A++ S E+A K+GPYET+ SP SKG+LQ D+WN PSD + DW L+ + K+G+RNS
Sbjct: 540 AAVEASVELAIKDGPYETFAGSPASKGLLQFDLWNHKPSDLYTDWDELKQKVVKSGMRNS 599
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIK 675
LLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVNK+L+ LTE+ +W+ +K
Sbjct: 600 LLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVNKYLVKKLTELNLWNKQMK 659
Query: 676 NKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPN 735
++I+ GSV I EIP+ ++ ++KTVW+I Q T++DMAVDR +IDQ QSLNIHM P
Sbjct: 660 DRILVAGGSVMNIDEIPQHVRDVFKTVWDILQRTIIDMAVDRAKFIDQLQSLNIHMRNPT 719
Query: 736 FKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
K+TS HF W +GLKTG+YYLR+++A+ AI+FTV
Sbjct: 720 KSKLTSCHFYAWKQGLKTGLYYLRTQSASRAIQFTV 755
>gi|448527129|ref|XP_003869437.1| Rnr3 ribonucleotide reductase large subunit [Candida orthopsilosis
Co 90-125]
gi|380353790|emb|CCG23302.1| Rnr3 ribonucleotide reductase large subunit [Candida orthopsilosis]
Length = 819
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/751 (55%), Positives = 534/751 (71%), Gaps = 17/751 (2%)
Query: 22 LKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI 81
L K +GL T H + + +G+ +T +L A+E A+ +HPDYA A R+
Sbjct: 21 LVKFCHGLDTVHVKLDDIVTSILSGLPDSITIHELYNFASEVIASRIIHHPDYAIFAGRM 80
Query: 82 AVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDF 141
L +FSE I+ + N R G + I+D YEI++K+ D I
Sbjct: 81 VAHLLQLQIPYTFSENIERLKQTTNAR-GKQYSQISDKFYEIVVKHREQFDEIIEKTEKI 139
Query: 142 DYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHA 201
+ YFG KTLE SYL ++ KV E P++M +RV+I IH DDI++ +TY +MSQ+ F HA
Sbjct: 140 ELAYFGIKTLENSYLWRIDDKVAETPEYMFLRVAIEIHYDDIEAVEETYELMSQKHFIHA 199
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
SPTL+NAG LSSCFL+ MKDDSI+GIY+TL E A+ISK++GGIG+ +HNIRA GS+
Sbjct: 200 SPTLYNAGCEYNYLSSCFLLAMKDDSIDGIYQTLHEAALISKASGGIGIHIHNIRAQGSH 259
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I TNG S G+VPMLRVFN+TARYVDQGGGKR GAFA+Y+EPWHADIF+ LN++KNHG E
Sbjct: 260 ISSTNGRSGGVVPMLRVFNNTARYVDQGGGKRPGAFAIYMEPWHADIFDILNMRKNHGNE 319
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAK 381
E R RDLFY LW+PDLFM+RV++ WSLF P+ A GL+D +G+EF K+Y YE +G A
Sbjct: 320 ELRTRDLFYGLWIPDLFMQRVKSGDDWSLFSPDIAPGLSDVYGSEFVKMYEKYETQGLAS 379
Query: 382 KVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTET 441
++AQ LW IL SQ ETG PYML+KD CN+K+NQ NLGTIKSSNLC EI+EY++P ET
Sbjct: 380 ATIKAQKLWLAILESQTETGGPYMLYKDACNQKTNQSNLGTIKSSNLCCEIVEYSAPDET 439
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNLAS+ LP F+R D +E FDF+KL VT +VT NLNK+ID
Sbjct: 440 AVCNLASLGLPSFLRSTDDCIE----------------FDFDKLHSVTKVVTRNLNKVID 483
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
V YPVE+A SN R+RPI +GVQGLAD F+ L + F+S EA++LN IFETIY+ A++
Sbjct: 484 VTRYPVESAETSNKRNRPIALGVQGLADLFLELRLPFDSQEAKKLNSQIFETIYHAAVEA 543
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S E+A + PY T+ SP SKG LQ DMWN P DW L+D + G+RNSLL+APM
Sbjct: 544 SIELAKLDEPYFTFAGSPASKGTLQFDMWNHKPEFYDDWDQLKDDVKNYGMRNSLLIAPM 603
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTASTSQILG NECFEPYTSN+Y+RRV+SGEF VVNK+L+ DL+++GIW+ ++N+II D
Sbjct: 604 PTASTSQILGFNECFEPYTSNLYTRRVISGEFQVVNKYLIKDLSDLGIWNSAMRNRIIQD 663
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
GS+Q I IP+++K +Y+TVWE+KQ ++DMA DRG +IDQSQS+NI+M P K+TS
Sbjct: 664 GGSIQDISVIPKDIKELYRTVWELKQKDIIDMAADRGKFIDQSQSMNIYMQNPTIGKLTS 723
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
HF W +GLKTGMYYLR++AA AI+FTVD
Sbjct: 724 CHFYAWEKGLKTGMYYLRTQAATRAIQFTVD 754
>gi|322511018|gb|ADX06331.1| putative ribonucleotide reductase large subunit A [Organic Lake
phycodnavirus 2]
Length = 831
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/838 (51%), Positives = 572/838 (68%), Gaps = 73/838 (8%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLS--YGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDEL 59
YV+KR+ R+E + +DKI R KKL Y L ++ VL K+ +Y + T ++DEL
Sbjct: 3 YVIKRNERKELLSYDKILERTKKLGDKYNLEIQYSGLVL---KIIDQLYNNIKTCEIDEL 59
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADD 119
AE A+M + H DY+ LA I VSN HK TK + E+++ + Y ++
Sbjct: 60 MAEQCASMGSIHYDYSKLAGYICVSNHHKETKHTLLESVQLLSKKY----------LSTR 109
Query: 120 IYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH 179
Y I+ K+ L+ I+Y+R+F DYFG+KTLERSYL++ KVVE QH+ MRVSI IH
Sbjct: 110 YYSIVEKHHKELEHMIVYERNFLIDYFGYKTLERSYLMRNNNKVVENIQHLWMRVSIEIH 169
Query: 180 KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECA 239
+++D +TY +S++ F HA+PTL+N+GT RPQLSSC+L+ M+DDSI+GI+ TL ECA
Sbjct: 170 GENLDKVKETYDGLSKKLFIHATPTLYNSGTRRPQLSSCYLLGMEDDSIDGIFNTLHECA 229
Query: 240 VISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
ISK AGGIG+ +HN+R+ G++I GTNG SNGIVPMLRVFN+TARYVDQGGGKR G+FA+
Sbjct: 230 SISKWAGGIGLHIHNVRSKGTHISGTNGKSNGIVPMLRVFNNTARYVDQGGGKRNGSFAI 289
Query: 300 YLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGL 359
YLEPWH DI EFL L+KNHG+EE RARDLFYALWVPDLFM +++ + W L CPN+ GL
Sbjct: 290 YLEPWHGDIEEFLELRKNHGEEEMRARDLFYALWVPDLFMNKIEKDDDWYLMCPNQCEGL 349
Query: 360 ADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQN 419
++ +G FE LY Y EGK K ++A+ LWF+IL SQ+ETGTPYML+KD CN+KSNQ+N
Sbjct: 350 SELYGESFEALYNQYVSEGKYLKKMKARELWFKILDSQMETGTPYMLYKDACNKKSNQKN 409
Query: 420 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKD-------------------- 459
LGTI+SSNLC EIIEY+ E+AVCNLASI+L FV+
Sbjct: 410 LGTIRSSNLCCEIIEYSDKEESAVCNLASISLSSFVKPSKYKFKGNVNVYTKEKCKWCYY 469
Query: 460 ----------------VPVESHPSRIVGSRGSKNRFFDFEK------------------- 484
+P + + S + F D EK
Sbjct: 470 LKHLLDHHKIIYTTHLIPEKEYDSFLKEHTTFPQLFVDQEKIGGFSKVNELLTPWFDYKG 529
Query: 485 LAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQ 544
L ++T IVTENLN IIDVNYYP E R SN +HRPIGIGVQGLADTF ++ +AF+S +A+
Sbjct: 530 LHKITKIVTENLNNIIDVNYYPTEKTRLSNKKHRPIGIGVQGLADTFAMMNVAFDSNDAK 589
Query: 545 QLNKDIFETIYYHALKTSSEIAA-KEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVL 603
Q+NKDIFET+Y+ +++ S E+A K+GPY+++ SP+S+GI Q D+WNV PS++++W L
Sbjct: 590 QINKDIFETMYHASMEKSMELAKEKQGPYDSFDGSPLSQGIFQFDLWNVTPSNKYNWDKL 649
Query: 604 RDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHD 663
R+ I + G NSL +APMPTASTSQIL NNECFEP+TSN+Y+RR L+GEF+V+NKHL+ +
Sbjct: 650 RNNIMEFGTYNSLCLAPMPTASTSQILSNNECFEPFTSNMYTRRTLAGEFMVINKHLMKE 709
Query: 664 LTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQ 723
L ++ IW+ +IKN+I+ GS+Q I EIP+ +K YK VWE+ +++DMA DRG YI Q
Sbjct: 710 LIDLNIWNSSIKNEIVKHKGSIQTIKEIPDYIKQKYKIVWEMSMKSIIDMAKDRGAYICQ 769
Query: 724 SQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
SQS+N+ ++ PN+K +T++H W GLKTGMYYLR +A A +FTV KE PE
Sbjct: 770 SQSMNLWVEDPNYKILTNMHLYAWKSGLKTGMYYLRRKAKHQAQQFTVVPD--KEDPE 825
>gi|269105082|ref|ZP_06157777.1| ribonucleoside-diphosphate reductase alpha subunit [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268160717|gb|EEZ39215.1| ribonucleoside-diphosphate reductase alpha subunit [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 729
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/747 (54%), Positives = 541/747 (72%), Gaps = 33/747 (4%)
Query: 25 LSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVS 84
L+ GL E P+ V+Q+V +G+Y G+ +++D AETAA++ T HPDYA LAAR+ VS
Sbjct: 2 LADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFLAETAASLATEHPDYAKLAARVMVS 58
Query: 85 NLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYD 144
+L K T + T R + +++ + + KN L+ I Y RD+ +D
Sbjct: 59 SLQKETSGYATAT----------RELSEIGILSSAYVDFVAKNQFALEDMIDYKRDYQFD 108
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPT 204
YFG+KTLERSYLLKV+G VVERPQ M MRV++ + DD++ + Y ++S ++THA+PT
Sbjct: 109 YFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAGDDLEEIRELYDLLSLCYYTHATPT 168
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFNAG QLSSCFL+ M++DSI GIY+TLK+CA+ISKSAGGIG+ +HNIRATG+ I G
Sbjct: 169 LFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCALISKSAGGIGLHIHNIRATGAPIIG 228
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVYLEPWHADI FL+L+KNHGKEE R
Sbjct: 229 TNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVYLEPWHADIESFLDLRKNHGKEEFR 288
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
ARDLF ALWVPDLFMERV+T+ +W+LF P+ GL+D +GAEF + Y YER G K +
Sbjct: 289 ARDLFLALWVPDLFMERVETDAEWTLFSPHNTKGLSDLYGAEFTQKYQEYERMGLGVKTI 348
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVC 444
+A+ L +I+ SQ ETGTPYML+KD CN KSNQ+NLGTIKSSNLC EI+E ++P ETA C
Sbjct: 349 KARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNLGTIKSSNLCAEIMEVSTPDETAAC 408
Query: 445 NLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNY 504
NLAS+ALP+FV N FDF+KL +VT + +NL+++IDVNY
Sbjct: 409 NLASLALPKFV--------------------TNTGFDFDKLHQVTKVAIKNLDRVIDVNY 448
Query: 505 YPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSE 564
+P + +SN HRP+G+G+QGLAD F + + F+S EA LN+DI ET+Y+ +L+ S E
Sbjct: 449 HPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDSEEALLLNRDIAETMYHASLEASCE 508
Query: 565 IAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTA 624
IA ++G Y +Y SP+S G Q D+W PS RWDW L+ I+++GVRNSLL+A MPTA
Sbjct: 509 IAKQKGTYSSYDGSPISHGQFQFDLWCEQPSSRWDWSQLKHQIAEHGVRNSLLIAQMPTA 568
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGS 684
ST+QILGNNE FE TSNIY R+ LSGEF+++NK+L+ DL + G+W+ I++ II ++GS
Sbjct: 569 STAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKYLVSDLEQRGLWTSKIRDAIILNNGS 628
Query: 685 VQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHF 744
VQ I IP++L+ +Y+TVWEI Q ++DM+ R ++ QSQSLN+ + P F ++ ++HF
Sbjct: 629 VQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPFVCQSQSLNLWLASPTFAQINAMHF 688
Query: 745 RTWSRGLKTGMYYLRSRAAADAIKFTV 771
W RGLKTGMYYLRS+ + +A+K TV
Sbjct: 689 YAWKRGLKTGMYYLRSKPSTNAVKVTV 715
>gi|299472902|emb|CBN80471.1| EsV-1-180 [Ectocarpus siliculosus]
Length = 766
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/801 (53%), Positives = 562/801 (70%), Gaps = 41/801 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MY+ KRDGR+E V FDKI+AR+KKL YGL + + D V ++QKV +GVY GVTT++LD LA
Sbjct: 4 MYITKRDGRKENVLFDKISARIKKLCYGLDSRYVDHVAIAQKVISGVYAGVTTTELDTLA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA M +HPDY+ LA RIAVS+LHK TK+SF ET+ D++++ ++ADD+
Sbjct: 64 AETAAYMAISHPDYSLLAGRIAVSSLHKETKESFVETMADLHDY---------GMVADDV 114
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ I NA LD I Y +D +YD+F FKTLE+SYLLK+ G +VER QHMLMRV++GIHK
Sbjct: 115 HAAIQDNAHLLDGAIDYGKDLEYDFFAFKTLEKSYLLKIDGNIVERIQHMLMRVAVGIHK 174
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+S + TY +S+RW THA+PTLFNAGT QLSSCFL+ M+DDS++GIY+TLK+ A
Sbjct: 175 DDIESVLDTYTELSERWMTHATPTLFNAGTVNNQLSSCFLLAMQDDSVDGIYDTLKQTAK 234
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SV NIRA GSYI+GTNG S+GIVP+LR F TAR+++Q G+RKG+FA+Y
Sbjct: 235 ISKFAGGIGLSVSNIRAKGSYIKGTNGVSDGIVPLLRCFESTARFINQ-AGRRKGSFAMY 293
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LE WHADI EFL+LKKN+G E RARDLFY LWV DLFM RV+ +G W+L P++A L
Sbjct: 294 LEMWHADILEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGDWTLLSPSDAPDLI 353
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D GA+F++ Y YE +G K ++A+ L+ +++ SQIETG PY LFKD+CN KSNQQ+L
Sbjct: 354 DLHGADFDRAYEKYESDGIG-KTIKARTLFAKVVESQIETGGPYYLFKDSCNAKSNQQHL 412
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLC E+I+Y+S E AVCNLASI L R V+ ++ F
Sbjct: 413 GTIRSSNLCAEVIQYSSKEEIAVCNLASINLVRHVK-------------------PDKTF 453
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFE+L + +NLNK+ID N+YP+E SN++HRP G+GVQ L D F+++G FES
Sbjct: 454 DFERLHKTAKQAIKNLNKVIDANFYPLEECSLSNMKHRPCGLGVQALHDVFMVMGFPFES 513
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIPSDRWD 599
EA LNK IFETIY+ +++ S E A +GPYE++ SP S G LQ D+W + + R D
Sbjct: 514 EEAATLNKQIFETIYHGSVEASIERAKIDGPYESFQGSPASFGKLQFDLWGHEVDDSRHD 573
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQIL-GNNECFEPYTSNIYSRRVLSGEFVVVNK 658
W +R + G+RNSLL A MPTAS++ G E E T+ +Y+RRVLSGEF +VNK
Sbjct: 574 WTKIRGDLKTYGMRNSLLTALMPTASSASFCSGGTEAAECSTAVLYNRRVLSGEFPIVNK 633
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
+L+ +L ++G+W +KN II GSVQ I IPE+ +M++K VWE+ Q +++ A RG
Sbjct: 634 YLIRELIKLGLWDGEMKNAIIRGGGSVQGIESIPEKTRMLFKNVWEVSQKAVIEQAAARG 693
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
YIDQSQS+NI ++P K++S F W GLKT YY+RSR AD ++FTV
Sbjct: 694 PYIDQSQSMNIFFERPTVAKISSALFYGWKLGLKTASYYVRSRPVADPVQFTV------- 746
Query: 779 KPEKPELVVDDETKMAQVVCS 799
PE+P V D+E + CS
Sbjct: 747 SPEEP--VGDEEDDKECLDCS 765
>gi|90592870|ref|YP_529823.1| RR1 [Agrotis segetum nucleopolyhedrovirus]
gi|71559320|gb|AAZ38319.1| RR1 [Agrotis segetum nucleopolyhedrovirus]
Length = 779
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/801 (51%), Positives = 564/801 (70%), Gaps = 30/801 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V++RDG ++ VH I A ++ L + L+ ++ + +V+ + G+ G+TT +L+ A
Sbjct: 3 LHVIRRDGSRKEVHLHDIKAGIETLCFNLNKQYVNAAVVALNIMKGIRPGITTEELNVYA 62
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+ A+MT H D+A LA RI V +LH SFSE + +++ H L++D++
Sbjct: 63 ADVVASMTYIHHDFAVLAGRILVDDLHNKIDASFSEVVFNLHRH---------KLVSDEL 113
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
++ + ++ I + D+ Y +FG+KTLE YLLK+ +V ERPQHMLMRV++GIH
Sbjct: 114 ASVVESHGDEINEAIDHAVDYTYKFFGYKTLENGYLLKIDNQVAERPQHMLMRVALGIHG 173
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI AI+TY MMS++ FTHASPTLF+AGTP Q+ SCFL+ ++ DSI+GIYETL +CA
Sbjct: 174 DDIQDAIETYRMMSRKMFTHASPTLFSAGTPMAQMCSCFLLGIRSDSIDGIYETLGDCAA 233
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GG+GV+VH +R+ G+ I TNG ++G+ PM+RVFN+ R+VDQGG KRKGA AVY
Sbjct: 234 ISKYGGGLGVNVHCVRSRGTRINSTNGVASGVEPMVRVFNNMVRHVDQGG-KRKGALAVY 292
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWHADI+ LNLK+N G E+ +ARDL YALWVPDLFMERV NG WSL CPN+ GL+
Sbjct: 293 IEPWHADIYSVLNLKRNMGAEDCKARDLMYALWVPDLFMERVNANGVWSLMCPNKCPGLS 352
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G+ FE+LY YE EG+ ++ V+AQ+L I+ +Q+ETG PYML+KD CNRKSNQQNL
Sbjct: 353 DCYGSAFEELYRKYEEEGRYQQQVRAQDLHRFIVETQVETGGPYMLYKDACNRKSNQQNL 412
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC EI++Y+ ETAVCNLASIA+ V V E+ F
Sbjct: 413 GTIKCSNLCAEIVQYSDAEETAVCNLASIAVNSCV----VVDEAR--------------F 454
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFEKL +T +V NLNKIID N YP+E+AR SN++HRPIG+G+QGLAD F+LL M +ES
Sbjct: 455 DFEKLRHITKVVVRNLNKIIDRNRYPIESARMSNMKHRPIGVGIQGLADAFVLLRMPYES 514
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA LN+ I ETIY+ AL+ S E+A G Y ++ SP S+GILQ DMW+V P+ WDW
Sbjct: 515 DEAMLLNRQIAETIYFGALEASCELAKTWGSYSSFQGSPASEGILQYDMWDVRPTSLWDW 574
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
G L++ I K+G+RNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L
Sbjct: 575 GTLKEDIKKHGLRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYL 634
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL ++ +++ ++N I GS+Q I IP+ +K +YKT WE+K +++MA DR +
Sbjct: 635 IDDLIKLKLYTSEMRNAIFAHKGSIQAIDGIPDHIKRLYKTAWEMKCKRMIEMAADRNAF 694
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLN+ + +P + +TS+H TW GLKTGMYYLR++ AA +FTV+ E+
Sbjct: 695 IDQSQSLNLFVAEPTYALMTSIHDYTWRSGLKTGMYYLRTKPAAHTQQFTVEQQFTVERG 754
Query: 781 E--KPELVVDDETKMAQVVCS 799
+ K + + + AQ VC+
Sbjct: 755 DVCKKRKINNYDEDAAQNVCA 775
>gi|13242650|ref|NP_077665.1| EsV-1-180 [Ectocarpus siliculosus virus 1]
gi|13177450|gb|AAK14594.1|AF204951_179 EsV-1-180 [Ectocarpus siliculosus virus 1]
Length = 765
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/775 (54%), Positives = 547/775 (70%), Gaps = 32/775 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MY+ KRDGR+E V FDKI+AR+KKL YGL D V ++QKV +GVY GVTT++LD LA
Sbjct: 4 MYITKRDGRKENVLFDKISARIKKLCYGLEPNFVDHVAIAQKVISGVYTGVTTTELDTLA 63
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA M HPDY+ LA RIAVS LHK TK+SF ET+ D++ + ++ADD+
Sbjct: 64 AETAAYMAIAHPDYSLLAGRIAVSRLHKETKESFVETMADLHAY---------GMVADDV 114
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ +I NA LD I Y +D +YD+F FKTLE+SYLLK+ GK+VER QHMLMRV++GIHK
Sbjct: 115 HTVIQDNAHLLDGAIDYGKDLEYDFFAFKTLEKSYLLKIDGKIVERIQHMLMRVAVGIHK 174
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+S ++TY MS+RW THA+PTLFNAGT QLSSCFL+ M+DDS++GIY+TLK+ A
Sbjct: 175 DDIESVLETYTGMSERWMTHATPTLFNAGTVNNQLSSCFLLAMQDDSVDGIYDTLKQTAK 234
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SV NIRA GSYI+GTNG S+GIVP+LR F TAR+++Q G+RKG+FA+Y
Sbjct: 235 ISKFAGGIGLSVSNIRAKGSYIKGTNGVSDGIVPLLRCFESTARFINQ-AGRRKGSFAMY 293
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LE WHADI EFL+LKKN+G E RARDLFY LWV DLFM RV+ +G W+L P++A L
Sbjct: 294 LEVWHADILEFLDLKKNNGNELMRARDLFYGLWVSDLFMRRVKADGDWTLLSPSDAPDLI 353
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D GA+F++ Y YE G K ++A+ L+ +++ SQIETG PY LFKD CN KSNQ++L
Sbjct: 354 DLHGADFDQAYKKYESNGIG-KTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQRHL 412
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTI+SSNLC E+I+Y+S E AVCNLASI L R VR +R F
Sbjct: 413 GTIRSSNLCAEVIQYSSKEEIAVCNLASINLVRHVR-------------------ADRTF 453
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DFE+L +NLNK+IDVN+YP+E R SN++HRP G+GVQ L D ++++G FES
Sbjct: 454 DFERLHRTAKQAIKNLNKVIDVNFYPLEECRLSNMKHRPCGLGVQALHDVYMVMGFPFES 513
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIPSDRWD 599
EA LNK IFETIY+ +++ S E A +GPYE++ SP S G LQ D+W + + R D
Sbjct: 514 EEAATLNKQIFETIYHGSVEASIERAKIDGPYESFQGSPASFGKLQFDLWGHEVDDSRHD 573
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQIL-GNNECFEPYTSNIYSRRVLSGEFVVVNK 658
W + + K G+RNSLL A MPTAS++ G E E T+ +Y+RRVLSGEF +VNK
Sbjct: 574 WTKTKADLQKYGMRNSLLTALMPTASSASFCSGGTEAAECSTAVLYNRRVLSGEFPIVNK 633
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
+L+ +L +G+W +KN II GSVQ I IPE+ + ++K VWE+ Q +++ A RG
Sbjct: 634 YLIKELINLGLWDGEMKNAIIRGGGSVQGIESIPEKTRTLFKNVWEVSQKAIIEQAAARG 693
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT 773
YIDQSQS+NI ++P K++S + W GLKT YY+RSR AD ++FTV +
Sbjct: 694 PYIDQSQSMNIFFERPTMAKISSALYYGWELGLKTASYYVRSRPVADPVQFTVSS 748
>gi|322510749|gb|ADX06063.1| putative ribonucleotide diphosphate reductase, large subunit
[Organic Lake phycodnavirus 1]
Length = 824
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/860 (49%), Positives = 575/860 (66%), Gaps = 86/860 (10%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKK--LSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDE 58
++V+KR+ ++E + +DKI R+ K + Y L+ + VL KV ++ + TSQ+DE
Sbjct: 2 IHVLKRNSKKEVLSYDKILERVNKFIVKYNLNIQGSGLVL---KVIDQLHDNIKTSQIDE 58
Query: 59 LAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
L AE A+M T H DY+ LA I +SN HK TK++ E++ + K ++D
Sbjct: 59 LLAEQCASMGTIHYDYSKLAGYICISNHHKETKRTLFESVNILCT--------KKGYLSD 110
Query: 119 DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI 178
+ Y I+ ++ L++ I+YDR++ DYFG+KTLER+YL++ V+E QH+ MRV++ I
Sbjct: 111 NYYNIVKEHHKELETMIVYDRNYLIDYFGYKTLERAYLMRNDNMVIENIQHLWMRVAVQI 170
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
H + + TY +S++ F HA+PTL+NAGT RPQLSSC+L+ M++DSI+GI+ TL++C
Sbjct: 171 HGNCLPKVKDTYDGLSKKLFIHATPTLYNAGTTRPQLSSCYLLGMEEDSIDGIFNTLRDC 230
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A ISK AGGIG+ +HN+RA G+ I GTNGTSNGIVPMLRVFN+TARYVDQGGGKR G+FA
Sbjct: 231 ASISKWAGGIGLHIHNVRAKGTSILGTNGTSNGIVPMLRVFNNTARYVDQGGGKRNGSFA 290
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
+YLEPWH DI EFL L+KNHG EE RARDLFYALW+PDLFM +++ + W L CP+
Sbjct: 291 MYLEPWHGDILEFLELRKNHGDEEMRARDLFYALWIPDLFMRKIEHDEDWYLMCPHICKH 350
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L + +G EFE LY Y G+ K ++A+ LWF IL SQ+ETGTPYML+KD CN+KSNQ+
Sbjct: 351 LDNVYGEEFETLYESYVSSGQYLKKMKARELWFHILDSQMETGTPYMLYKDACNQKSNQK 410
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK-------------------- 458
N+GTIKSSNLC EIIEY+ E+AVCNLASI+L FV++
Sbjct: 411 NIGTIKSSNLCCEIIEYSDKDESAVCNLASISLSSFVKKSKFKLNGPIVVYAKENCKWCD 470
Query: 459 -----------------DVPVESHPSRIVGSR---GSKNRF------FDFEKLAEVTAIV 492
DV +P G + G + FD+ L ++T +V
Sbjct: 471 YLKSFLDSIKINYEVVMDVRQTMYPQLYAGDKKIGGFSDVISLFKSTFDYNGLHKITKMV 530
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFE 552
TENLN+IIDVNYYP + R+SNL+HRPIGIGVQGLAD F +L +AF+S EA+++NK IFE
Sbjct: 531 TENLNRIIDVNYYPTDKTRQSNLKHRPIGIGVQGLADVFAMLNIAFDSDEAKEINKMIFE 590
Query: 553 TIYYHALKTSSEIAA-KEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNG 611
T+Y+ +L+ S E+A ++ Y ++ SP+S+GILQ DMWNV PS R+DWG L+ I K G
Sbjct: 591 TMYHASLEKSMEMAKEQQTQYASFKGSPLSEGILQFDMWNVTPSKRYDWGALKQNIIKYG 650
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWS 671
NSL +APMPTASTSQIL NNECFEP+TSN+Y+RR L+GEF+V+NKHL+ +L ++ IW+
Sbjct: 651 TMNSLCMAPMPTASTSQILSNNECFEPFTSNMYTRRTLAGEFMVINKHLMKELIDLNIWN 710
Query: 672 PTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHM 731
+IKN I+ GS+Q I EIP+ +K YK VWE+ T++DM+ DRG YI QSQS+N+ +
Sbjct: 711 MSIKNDILKYKGSIQSIAEIPDYIKAKYKIVWEMSMKTIMDMSKDRGAYICQSQSMNLWV 770
Query: 732 DQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDET 791
++PN+K +T++H W GLKTGMYYLR +A A +FTV PEK
Sbjct: 771 EEPNYKTLTNMHLYAWKCGLKTGMYYLRRKAKHHAQQFTV-------TPEKEP------- 816
Query: 792 KMAQVVCSLTNREECMACGS 811
EC++CGS
Sbjct: 817 ------------TECVSCGS 824
>gi|255713718|ref|XP_002553141.1| KLTH0D09922p [Lachancea thermotolerans]
gi|238934521|emb|CAR22703.1| KLTH0D09922p [Lachancea thermotolerans CBS 6340]
Length = 867
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/794 (52%), Positives = 553/794 (69%), Gaps = 44/794 (5%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V R+G + + LK+L+ GL E D VS+++ V T S + + E
Sbjct: 7 VSDRNGEANKLTSQALAQSLKQLAGGLQIEDADFDAVSRRILDAVPPSATHSSVVQFGGE 66
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKK-SFSETIKDMYNHYNERSGLKAP------- 114
AAM+T HPD+A+LAAR +S LHK + SF+E + + RS KAP
Sbjct: 67 VLAAMSTTHPDFANLAARWEISELHKKLQGLSFTENLALLQKL---RSSSKAPTVKRHKT 123
Query: 115 --------LIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVV-E 165
LI+ YE+ ++ LD+ I DRDFD+ YFG+KTL +SYL+K + + E
Sbjct: 124 STSHNDKNLISAAFYEMALRYQTTLDAAIQPDRDFDFSYFGWKTLSKSYLIKRKNEETHE 183
Query: 166 RPQHMLMRVSIGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCM 223
PQ + MRV++ IH + DID+ ++TY +MS+++F HASPTLFNAGT LSSCFLV M
Sbjct: 184 TPQFLFMRVALAIHGPRGDIDAVLETYDLMSRKFFIHASPTLFNAGTVNQYLSSCFLVAM 243
Query: 224 KDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTA 283
+DSI+GIY TL + A+ISK++GG+GV V N+R TG+YI G+NGTSNG+VPMLRVFN+TA
Sbjct: 244 IEDSIDGIYRTLHKTAMISKASGGVGVHVSNVRGTGAYISGSNGTSNGLVPMLRVFNNTA 303
Query: 284 RYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQ 343
RYVDQGG KR GAF +YLEPWH+D+ +FL L+KN GKEE RARDLF ALW+PDLFMERV+
Sbjct: 304 RYVDQGGNKRPGAFCIYLEPWHSDVLDFLQLRKNQGKEELRARDLFLALWIPDLFMERVE 363
Query: 344 TNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTP 403
NG W LF P+EA GL +C+G EF+KLY YE+ K + AQ LW EIL SQ+ETG P
Sbjct: 364 QNGSWCLFSPDEAPGLQECFGEEFKKLYETYEKTLAPAKKMPAQKLWSEILQSQVETGGP 423
Query: 404 YMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVE 463
+ML+KD+CN KSNQ+NLGTIKSSNLC EI++Y+SP+ETAVCNLAS+ALP FV+ +
Sbjct: 424 FMLYKDSCNNKSNQKNLGTIKSSNLCCEIVQYSSPSETAVCNLASVALPSFVKLQ----- 478
Query: 464 SHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIG 523
+ FDFE L ++ ++T+NL+ +ID+ YPVE A+ SN ++RPI IG
Sbjct: 479 -----------REQAIFDFESLHKIVKVLTKNLDSVIDICDYPVEDAKFSNEKNRPIAIG 527
Query: 524 VQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKG 583
VQGLAD ++L + F S A+ LNK IFETIY+ A++TS E + K GPY ++ NSPVS+G
Sbjct: 528 VQGLADALMILRIPFHSESARVLNKQIFETIYHAAVETSIERSKKLGPYPSFDNSPVSRG 587
Query: 584 ILQPDMWNVIPSDRW-----DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
Q D+W + D + DW +R+ + ++G+RNSLLV PMPTASTSQILG E FEP
Sbjct: 588 EFQFDLWG-LNDDNYEFLFSDWKEMREKVKQHGIRNSLLVGPMPTASTSQILGFTESFEP 646
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
TSNIY+RRVLSGEF V+NK+++ D +GIW+ +KN+II +GS+Q I IP LK +
Sbjct: 647 MTSNIYTRRVLSGEFTVINKYMVDDFCRLGIWNEKLKNRIIEQNGSIQGIEGIPSNLKEL 706
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
Y+TVWEI Q ++D++ DRG +IDQSQSLN+ + +P K+TS+HF W +GLKTGMYYL
Sbjct: 707 YRTVWEIPQRVMIDLSADRGPFIDQSQSLNLFLREPTMGKLTSMHFYGWKKGLKTGMYYL 766
Query: 759 RSRAAADAIKFTVD 772
R++AA+ AIKFT++
Sbjct: 767 RTQAASGAIKFTIN 780
>gi|406707527|ref|YP_006757879.1| ribonucleoside-diphosphate reductase subunit alpha [alpha
proteobacterium HIMB59]
gi|406653303|gb|AFS48702.1| ribonucleoside-diphosphate reductase, alpha subunit [alpha
proteobacterium HIMB59]
Length = 912
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/813 (50%), Positives = 558/813 (68%), Gaps = 47/813 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KRDG +E + +KIT R+ LS GL DP+ ++QK G+Y G+TT+++D
Sbjct: 145 MAVTKRDGHKEDISLEKITNRISVLSNGL---EIDPITIAQKAIQGLYDGITTNEIDTYL 201
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAA+T HPDY+ LA RI + LHK T F K+++ + L+ ++
Sbjct: 202 AETAAALTVEHPDYSYLAGRIKANALHKETP-GFIIATKNLF---------EDGLLREEY 251
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+ M +A ++ I YDRD+ +DYF TL R+YLL+ K +ERPQ + MRV++ +
Sbjct: 252 YQKAMAHAEDIEKIIDYDRDYLFDYFALTTLFRAYLLQFNNKTIERPQDLWMRVALCVSG 311
Query: 181 DDID--SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
D D KTY +SQ +THA+PTLFN+G QLSSCFL+ M+DDSIEGI+ T+K+C
Sbjct: 312 DKFDFYQVKKTYDSLSQGLYTHATPTLFNSGLKMQQLSSCFLIGMEDDSIEGIFNTVKDC 371
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIG+ HNIRA GS I+ TNG SNG++P L++FN+TAR VDQGGGKRKG+FA
Sbjct: 372 ALISKTAGGIGLHAHNIRAGGSRIKSTNGKSNGLIPFLKIFNETARSVDQGGGKRKGSFA 431
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
VYLEPWHADI FL L+KN G EE RARDLFYALW+PDLFM+RV+ +G+W+L +E G
Sbjct: 432 VYLEPWHADIEAFLELRKNTGAEEFRARDLFYALWIPDLFMQRVEEDGEWTLMSEHECPG 491
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L++ +G+EF +LYT YE+E K V+A+ L +I+ +QIETG PYML+KD+ N KSNQ+
Sbjct: 492 LSNTYGSEFVELYTKYEKEMPDLKRVKARALMSKIIEAQIETGQPYMLYKDSINNKSNQK 551
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
N+G IKSSNLC EI+EY+ ETAVCNLASIALP+FV E +
Sbjct: 552 NIGVIKSSNLCAEIVEYSEKDETAVCNLASIALPKFVTE-------------------DG 592
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
+D++ L ++ + T+NL+++ID+N+YP + + SN RHRPIG+G+QGLAD + + +A+
Sbjct: 593 KYDYQNLYQIAKLATKNLDQVIDINFYPTDKTQNSNSRHRPIGLGIQGLADVYFKMNLAY 652
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW 598
+S +AQ +NK IFETIY+ AL+ S E+AA +G Y T+ SP+S+G Q D+W V PS+ W
Sbjct: 653 DSVQAQIINKQIFETIYFGALEASMELAADKGAYSTFQGSPLSQGQFQFDLWGVKPSNMW 712
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW L + I K+GVRNSL A MPTAST ILGN E F+ TSNIY R+ LSGEF++VN+
Sbjct: 713 DWKGLMEKIQKHGVRNSLTTACMPTASTGIILGNTETFQVQTSNIYKRQTLSGEFLLVNR 772
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
+L+ +L G+WS ++++II ++GSVQ I PE+LK +YKTVWE Q T++DMA +R
Sbjct: 773 YLVKELMARGLWSKELRDQIILENGSVQNIEGFPEDLKEVYKTVWETSQKTVIDMAAERA 832
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
+IDQ+QS+N+ + P F KV S+H W +GLKTGMYYLRSR+A DA+K TV + E
Sbjct: 833 PFIDQTQSMNLWLATPTFGKVNSMHMYAWKKGLKTGMYYLRSRSAVDAVKVTVSS----E 888
Query: 779 KPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
K K V + ++ E+C+ C +
Sbjct: 889 KKAKETYVKEAQS---------NEPEDCLTCSA 912
>gi|385303542|gb|EIF47607.1| ribonucleoside-diphosphate reductase large chain [Dekkera
bruxellensis AWRI1499]
Length = 830
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/786 (53%), Positives = 552/786 (70%), Gaps = 25/786 (3%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V K G ++ ++ ++KLS+GL+ ++ V KV G+ +T SQL + AE
Sbjct: 11 VNKXKGSRQRFDRPRLRQYIEKLSHGLNKKYISTDKVLDKVXEGLPDELTVSQLIDFTAE 70
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHY----NERSGLKAP---L 115
TAAA+TT+H Y++LAARI +L K FS+ ++ + + R GLKA L
Sbjct: 71 TAAALTTSHYQYSNLAARILERHLQKRVPARFSQNLEVLRAYKPGTGRRRKGLKASYKHL 130
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
IA D+YE++M + +D +I+ +RDFD DYFGF+TLE+SYLLK+ G E PQ +LMRV+
Sbjct: 131 IARDLYELVMAHREEIDRQIVAERDFDIDYFGFRTLEKSYLLKMDGVCHETPQFLLMRVA 190
Query: 176 IGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
+ +H D + A ++Y +MS+R+ HASPTLFNAGT P LSSCFLV ++ DS++GI+ T+
Sbjct: 191 LSLHLDSLSDAFESYDLMSRRFLLHASPTLFNAGTEFPNLSSCFLVGLQSDSLDGIFRTV 250
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
CA+ISK+AGGIG+ + N+RA G+YI GTNGTS+GIVPMLRVFN TA+YVDQGG KR G
Sbjct: 251 HGCAMISKAAGGIGMHLSNVRAAGTYISGTNGTSSGIVPMLRVFNSTAKYVDQGGNKRPG 310
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
A YLEPWHADI EFL+LKKNHGKEE RARDLFYALW+PDLFM RV+ + WSLF +
Sbjct: 311 AICAYLEPWHADIMEFLDLKKNHGKEEMRARDLFYALWIPDLFMRRVEKDQVWSLFSEDT 370
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
A GL+D WGAEFE LY YE+EG+ + V+A+ +W IL SQ ETGTP++L+KD CN K
Sbjct: 371 APGLSDTWGAEFESLYEQYEQEGRYLRQVKARKVWERILYSQTETGTPFLLYKDACNAKC 430
Query: 416 NQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGS 475
NQ+NLGTIKSSNLC E++EY+ E AVCNL S+ LP FV E D G
Sbjct: 431 NQKNLGTIKSSNLCCEVVEYSCKDEIAVCNLGSVGLPMFV-EXD--------------GQ 475
Query: 476 KNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
FF+ KL +V ++ NLN++IDV YP++ R SN RHRP+ +GVQGLAD F L
Sbjct: 476 GGXFFNLXKLHDVVRVLVRNLNRVIDVGAYPLDECRVSNTRHRPVAVGVQGLADAFFRLR 535
Query: 536 MAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS 595
AF SPE+++LNK IF+TIY+ AL S+++A +EGPY T+ SP + G+LQ DMW P+
Sbjct: 536 YAFGSPESRRLNKAIFQTIYHAALDQSADLARQEGPYSTFRGSPAANGVLQYDMWGTEPA 595
Query: 596 ---DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
D WDW L+ I + G+RNSLLVA MPTASTSQILG ECFEP TSNIY+RRVLSGE
Sbjct: 596 ETRDLWDWPGLKXKIRRFGLRNSLLVALMPTASTSQILGFTECFEPITSNIYTRRVLSGE 655
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
VVN +L+ DL +G+W+ +K++II +GS+Q I IPE K +YKTVW++ Q ++D
Sbjct: 656 HQVVNSYLVDDLDHLGLWNAHMKDQIIAANGSIQDIAGIPEHTKQLYKTVWDMSQKIIID 715
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA DR Y+DQSQS+N+ + K+TS+HF W +GLKTGMYYLR++AA+ AIKFT+
Sbjct: 716 MAADRAPYVDQSQSMNLFLKDCTLAKMTSMHFYAWHKGLKTGMYYLRTQAASQAIKFTLS 775
Query: 773 TSVFKE 778
++ +E
Sbjct: 776 PTMERE 781
>gi|254584212|ref|XP_002497674.1| ZYRO0F10956p [Zygosaccharomyces rouxii]
gi|238940567|emb|CAR28741.1| ZYRO0F10956p [Zygosaccharomyces rouxii]
Length = 875
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/777 (53%), Positives = 565/777 (72%), Gaps = 41/777 (5%)
Query: 21 RLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAAR 80
+L++LS+GL+ ++ D + QK+ +GV V Q+ AAET A++T+ HPD++ LAAR
Sbjct: 25 KLRELSFGLNLDYLDFDKIVQKISSGVPDDVEGWQVIRHAAETVASLTSIHPDHSILAAR 84
Query: 81 IAVSNLHKNTKK-SFSETIKDMYNHYNERSG------------LKAP---LIADDIYEII 124
+ + LHK+ + +F+E +K + + S ++AP +I+++ ++
Sbjct: 85 LEIDELHKSLRGITFTENLKQLRSSTRVTSEGDNRVPSKRQKVMRAPKKGVISEEFLQMA 144
Query: 125 MKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-KVVERPQHMLMRVSIGIHK--D 181
+K L+ I+++RDF++ YFG+KTL +SYL+K ++ E PQ + MRV++ IH +
Sbjct: 145 LKYEKKLNDAIVHERDFNFTYFGWKTLCQSYLIKKNADQIHETPQFLFMRVALAIHGPFE 204
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVI 241
DIDS I+TY +MS+++F HASPTLFNAGT LSSCFLV MK+DSIEGI++TL++ A+I
Sbjct: 205 DIDSVIETYELMSRKYFIHASPTLFNAGTVNQYLSSCFLVGMKEDSIEGIFKTLEDTALI 264
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK++GGIG+ V NIRA+G+++ G+NGTSNGIVPMLRVFN+TARYVDQGG KR GA+ +YL
Sbjct: 265 SKASGGIGIHVSNIRASGAHVSGSNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAYCIYL 324
Query: 302 EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLAD 361
EPWH+D+F+FL L+KNHGK+E RARDLF+ALW+PDLFM+RVQ NG+WSLF P+EA GL+D
Sbjct: 325 EPWHSDVFDFLQLRKNHGKDELRARDLFFALWIPDLFMKRVQCNGEWSLFSPDEAPGLSD 384
Query: 362 CWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
+G EFE+LY YE K V+AQ LW EIL +Q+ETG P+ML+KD+CN KSNQ+NLG
Sbjct: 385 VYGKEFEELYEQYEATALPMKRVKAQKLWSEILQAQVETGGPFMLYKDSCNLKSNQKNLG 444
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
TIKSSNLC EI+EY+S ETAVCNLAS+ALP FV + V ++GS FD
Sbjct: 445 TIKSSNLCCEIVEYSSKDETAVCNLASVALPTFVVQ------------VTNKGS---IFD 489
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
F KL V +T NL+++IDV YP+ A+ SNLR+RP IGVQGLAD F++L + +ES
Sbjct: 490 FVKLHAVVKTITRNLDRVIDVCKYPIPQAQYSNLRNRPEAIGVQGLADVFLMLRIPYESQ 549
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW--- 598
EA+ LN IFETIY+ A++TS E+A + G YET+ SP S+G+LQ D+W + D +
Sbjct: 550 EARILNTQIFETIYHAAVETSIELAEEYGAYETFQGSPASQGLLQFDLWG-LNEDNYDFL 608
Query: 599 --DWGVLRDMISKN-GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
DWG L+ I G+RNSLL+ PMPTASTSQILG E FEP TSN+Y+RRVLSGEF+
Sbjct: 609 YRDWGELKHRIQNGRGLRNSLLLGPMPTASTSQILGYTESFEPMTSNVYARRVLSGEFIN 668
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VN++++ ++GIW+ +KN+II D+GSVQ I +P+ +K IY+TVWEI Q L+DMA
Sbjct: 669 VNQYMVDHFCQLGIWNEKLKNRIIADNGSVQNIQGLPDWIKKIYRTVWEIPQRPLIDMAR 728
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
DR +IDQSQSLN+ M P K+TS+HF W GLKTGMYYLR++AA+ AI+FTV+
Sbjct: 729 DRSPFIDQSQSLNLFMKTPTMGKLTSMHFHAWRHGLKTGMYYLRTQAASAAIQFTVN 785
>gi|367009204|ref|XP_003679103.1| hypothetical protein TDEL_0A05600 [Torulaspora delbrueckii]
gi|359746760|emb|CCE89892.1| hypothetical protein TDEL_0A05600 [Torulaspora delbrueckii]
Length = 865
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/797 (51%), Positives = 565/797 (70%), Gaps = 48/797 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
VK++G ++ +++T++L +LS+GL+ ++ D V +K V T +Q+ E A+T
Sbjct: 3 VKKEG---VLNVEELTSKLNELSFGLNQQYLDVGEVVRKASKAVPHSATEAQIVEYVAQT 59
Query: 64 AAAMTTNHPDYASLAARIAVSNLH----------------KNTKKSFSETIKDMYNHYNE 107
A++T+ HPDY+ LAAR+ ++ LH + ++++F++ D+ +
Sbjct: 60 LASLTSIHPDYSVLAARLEIAELHHKLRGISFTHNLEILREGSRRNFTDQKDDLRDRKRS 119
Query: 108 RSGLKAP---LIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK-V 163
++ + P +I+ + YE+ +K+ L+S I+ +RDF + YFG+KTL +SYL+K + V
Sbjct: 120 KT-TRVPNKSIISPEFYEMALKHEERLNSSIVVERDFHFTYFGWKTLCQSYLIKKDSEDV 178
Query: 164 VERPQHMLMRVSIGIHK--DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV 221
E PQ + MRV++ IH DIDS ++TY +MS+R+F HASPTLFNAGT LSSCFLV
Sbjct: 179 HETPQFLFMRVALAIHGPYSDIDSVVETYELMSKRYFIHASPTLFNAGTVNQYLSSCFLV 238
Query: 222 CMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFND 281
M +DSI+GI++TL + A+ISK++GGIG+ V NIR+ G+ I G+NG S+G+VPMLRVFN+
Sbjct: 239 GMIEDSIDGIFKTLHKTAMISKASGGIGLHVSNIRSNGALISGSNGVSSGLVPMLRVFNN 298
Query: 282 TARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMER 341
TARYVDQGG KR GA+ +YLEPWHADI +FL L+KNHGKEE RARDLF+ALW+PDLFM R
Sbjct: 299 TARYVDQGGNKRPGAYCIYLEPWHADILDFLQLRKNHGKEEMRARDLFFALWIPDLFMRR 358
Query: 342 VQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETG 401
V++NG W LF P+EA GL D +G EF+ LY HYE G K ++AQ LW EIL SQIETG
Sbjct: 359 VESNGDWCLFSPDEAPGLCDVYGKEFDDLYEHYETNGLPMKRIKAQKLWSEILQSQIETG 418
Query: 402 TPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVP 461
P+ML+KD+CN KSNQ+NLGTI+SSNLC EIIEY+S ETAVCNLAS+ALP FV+
Sbjct: 419 GPFMLYKDSCNEKSNQKNLGTIRSSNLCCEIIEYSSKDETAVCNLASVALPSFVKH---- 474
Query: 462 VESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIG 521
V +GS FDF+KL V ++T NL+++ID+ YPVE AR SN ++RP
Sbjct: 475 --------VEGKGS---IFDFKKLHSVVKLITRNLDRLIDICDYPVEDARYSNEKNRPQA 523
Query: 522 IGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVS 581
IGVQGLAD F +L ++FES EA LN+ +FETIY+ A++ S E+A K G Y ++ SP S
Sbjct: 524 IGVQGLADVFFILKISFESEEASTLNRQVFETIYHGAVEASVELAEKLGSYRSFEGSPAS 583
Query: 582 KGILQPDMWNVIPSDRW-----DWGVLRDMISKN-GVRNSLLVAPMPTASTSQILGNNEC 635
KG+LQ D W + + DW L+ ISK G+RNSLLVAPMPTASTSQILGN E
Sbjct: 584 KGLLQFDFWEK-SGEHYEYLYNDWDQLKQKISKGTGLRNSLLVAPMPTASTSQILGNTES 642
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
FEP TSN+Y+RRVLSGE++ VN++++ ++GIW+ +KNKII D+GSVQ I +P+ +
Sbjct: 643 FEPMTSNVYTRRVLSGEYINVNRYMVEHFCQLGIWNEKLKNKIIMDNGSVQNIKGLPDSI 702
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
K +YKTVWEI Q L+DMA R +IDQSQSLN+++ P K+T +HF W +GLKTGM
Sbjct: 703 KKLYKTVWEIPQRKLIDMARARSPFIDQSQSLNLYLKAPTMGKLTGMHFHAWRQGLKTGM 762
Query: 756 YYLRSRAAADAIKFTVD 772
YYLR++AA+ AI+FT++
Sbjct: 763 YYLRTQAASAAIQFTIN 779
>gi|380863076|gb|AFF18831.1| ribonucleotide reductase large subunit A, partial [Dimocarpus
longan]
Length = 421
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/421 (91%), Positives = 405/421 (96%)
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYE 375
KNHGKEEHRARDLFYALWVPDLFMERVQ+NG WSLFCPNEA GLADCWGAEFE+LYTHYE
Sbjct: 1 KNHGKEEHRARDLFYALWVPDLFMERVQSNGVWSLFCPNEAPGLADCWGAEFERLYTHYE 60
Query: 376 REGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEY 435
REGKAKKVVQAQNLWFEIL SQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEY
Sbjct: 61 REGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEY 120
Query: 436 TSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
TSPTETAVCNLASIALPR+VREK +P+ESHPS++VGSRGSKNR+FDFEKLAEVTAIVTEN
Sbjct: 121 TSPTETAVCNLASIALPRYVREKGIPMESHPSKLVGSRGSKNRYFDFEKLAEVTAIVTEN 180
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
LNKIIDVNYYPVE A+RSN+RHRPIGIGVQGLADTFILLGMAF+SPEAQQLNKDIFETIY
Sbjct: 181 LNKIIDVNYYPVENAKRSNMRHRPIGIGVQGLADTFILLGMAFDSPEAQQLNKDIFETIY 240
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNS 615
YHALK S+E+AAKEG YETY SPVSKGILQPDMW PS+RWDWG LRDMI+KNGVRNS
Sbjct: 241 YHALKASAEMAAKEGSYETYEGSPVSKGILQPDMWGATPSNRWDWGALRDMITKNGVRNS 300
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIK 675
LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG+WSP +K
Sbjct: 301 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPAVK 360
Query: 676 NKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPN 735
NKIIY+DGSVQKIPE+PEELK IYKTVWEIKQ TLVDMAVDRGCYIDQSQSLNIHMDQPN
Sbjct: 361 NKIIYNDGSVQKIPEVPEELKGIYKTVWEIKQKTLVDMAVDRGCYIDQSQSLNIHMDQPN 420
Query: 736 F 736
F
Sbjct: 421 F 421
>gi|429965375|gb|ELA47372.1| ribonucleoside-diphosphate reductase, alpha subunit [Vavraia
culicis 'floridensis']
Length = 773
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/812 (49%), Positives = 555/812 (68%), Gaps = 40/812 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V D E + KI L + S+GL+ + + K+ +G+ ++T + LA
Sbjct: 1 MFVRNSDKILEPLDTKKIHKMLLECSHGLNIMREELDDLFNKIESGLCDNLSTCDIVSLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA+ T +PD+ +AARI V HK T +F E +K Y + + +
Sbjct: 61 AECAASAMTKNPDFGCIAARIVVREHHKVTLDTFYEKVKYCYE--------QKRYFSREF 112
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E + +N + ++I Y RD+D +FGFKT+E+SY+L + + VERPQ + MRV++GIH
Sbjct: 113 CERVRENKDAIQAQIDYSRDYDISFFGFKTMEKSYMLSINSRTVERPQDLFMRVALGIHY 172
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D + A +TYH+MSQ++F HA+PT+FNAGT PQLSSCFL+ +++DSIEGI++ + + A
Sbjct: 173 DSLQDAFETYHLMSQKYFVHATPTMFNAGTLTPQLSSCFLLGIEEDSIEGIFKAVSDAAK 232
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++VH +R S I+ T G + GI+P+ ++F T R +DQGG KR G+ A+Y
Sbjct: 233 ISKTAGGLGMNVHKLRGANSLIKSTGGRACGIIPVAKIFEATLRCIDQGGKKRPGSMAIY 292
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+++KN GKEE RARD+F ALW+PDLFM RV + WSLF ++ L
Sbjct: 293 VEPWHSDIFEFLDIRKNTGKEELRARDIFTALWIPDLFMRRVHNDENWSLFSNDDVPNLY 352
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EF+K Y YE+ G A++ V+AQ LW IL+SQIETGTPYM +KD+ NR +NQ++L
Sbjct: 353 NLYGDEFDKAYEMYEKNGMARRTVRAQKLWKAILSSQIETGTPYMCYKDSANRMNNQKHL 412
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC+EI+EYT E AVCNLAS+ LPRF+++ F
Sbjct: 413 GTIKCSNLCSEIMEYTEENEIAVCNLASLGLPRFMQDGQ--------------------F 452
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+EKL VT IV +NLNK+IDVN YP+ R SNL+HRPIG+GVQGLAD F++L M ++S
Sbjct: 453 DYEKLKMVTKIVVKNLNKVIDVNLYPLPETRNSNLKHRPIGLGVQGLADVFVMLRMPYDS 512
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ +N IFETI++ AL S E+A + GPY++Y SP+S+G+L DMWNV+P DW
Sbjct: 513 KEARAVNLRIFETIHFAALDASCELAKEYGPYDSYEGSPMSQGVLHFDMWNVVPVTNHDW 572
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+K GVRNSLLVA MPTASTSQILG NECFEP+T+NIY+RR L+GEF VVN +L
Sbjct: 573 RGLRARIAKYGVRNSLLVALMPTASTSQILGYNECFEPFTTNIYTRRTLAGEFQVVNTYL 632
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+HDL ++ +WS +KN +I ++GS+Q+I IP+E+K +YKT WE+K +L+D+A DR Y
Sbjct: 633 MHDLMKLNLWSDEMKNILIQEEGSIQRIEGIPDEIKRLYKTAWELKMRSLIDLAADRAPY 692
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
+DQSQSLNI M QP + K+TS+HF + RGLKTGMYYLR+R + A+KFTVD
Sbjct: 693 VDQSQSLNIFMAQPTYPKLTSMHFYGFKRGLKTGMYYLRTRPISAAVKFTVDRG------ 746
Query: 781 EKPELVVDDETKMAQVVCSLTNR-EECMACGS 811
+V + + CS T+ +ECM+C +
Sbjct: 747 -----MVSTTKLLQKSSCSPTSEDDECMSCSA 773
>gi|429966492|gb|ELA48489.1| ribonucleoside-diphosphate reductase, alpha subunit [Vavraia
culicis 'floridensis']
Length = 773
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/812 (49%), Positives = 555/812 (68%), Gaps = 40/812 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V D E + KI L + S+GL+ + + K+ +G+ ++T + LA
Sbjct: 1 MFVRNSDKILEPLDTKKIHKMLLECSHGLNIMREELDDLFNKIESGLCDNLSTCDIVSLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA+ T +PD+ +AARI V H+ T +F E +K Y + + +
Sbjct: 61 AECAASAMTKNPDFGCIAARIVVREHHRVTLDTFYEKVKYCYE--------QKRYFSREF 112
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
E + +N + ++I Y RD+D +FGFKT+E+SY+L + + VERPQ + MRV++GIH
Sbjct: 113 CERVRENKDAIQAQIDYSRDYDISFFGFKTMEKSYMLSINSRTVERPQDLFMRVALGIHY 172
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D + A +TYH+MSQ++F HA+PT+FNAGT PQLSSCFL+ +++DSIEGI++ + + A
Sbjct: 173 DSLQDAFETYHLMSQKYFVHATPTMFNAGTLTPQLSSCFLLGIEEDSIEGIFKAVSDAAK 232
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++VH +R S I+ T G + GI+P+ ++F T R +DQGG KR G+ A+Y
Sbjct: 233 ISKTAGGLGMNVHKLRGANSLIKSTGGRACGIIPVAKIFEATLRCIDQGGKKRPGSMAIY 292
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH+DIFEFL+++KN GKEE RARD+F ALW+PDLFM RV + WSLF ++ L
Sbjct: 293 VEPWHSDIFEFLDIRKNTGKEELRARDIFTALWIPDLFMRRVHNDENWSLFSNDDVPNLY 352
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EF+K Y YE+ G A++ V+AQ LW IL+SQIETGTPYM +KD+ NR +NQ++L
Sbjct: 353 NLYGDEFDKAYEMYEKNGMARRTVRAQKLWKAILSSQIETGTPYMCYKDSANRMNNQKHL 412
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLC+EI+EYT E AVCNLAS+ LPRF+++ F
Sbjct: 413 GTIKCSNLCSEIMEYTEENEIAVCNLASLGLPRFMQDGQ--------------------F 452
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+EKL VT IV +NLNK+IDVN YP+ R SNL+HRPIG+GVQGLAD F++L M ++S
Sbjct: 453 DYEKLKMVTKIVVKNLNKVIDVNLYPLPETRNSNLKHRPIGLGVQGLADVFVMLRMPYDS 512
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA+ +N IFETI++ AL S E+A + GPY++Y SP+S+G+L DMWNV+P DW
Sbjct: 513 KEARAVNLRIFETIHFAALDASCELAKEYGPYDSYEGSPMSQGVLHFDMWNVVPVTNHDW 572
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+K GVRNSLLVA MPTASTSQILG NECFEP+T+NIY+RR L+GEF VVN +L
Sbjct: 573 RGLRARIAKYGVRNSLLVALMPTASTSQILGYNECFEPFTTNIYTRRTLAGEFQVVNTYL 632
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+HDL ++ +WS +KN +I ++GS+Q+I IP+E+K +YKT WE+K +L+D+A DR Y
Sbjct: 633 MHDLMKLNLWSDEMKNILIQEEGSIQRIEGIPDEIKRLYKTAWELKMRSLIDLAADRAPY 692
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
+DQSQSLNI M QP + K+TS+HF + RGLKTGMYYLR+R + A+KFTVD
Sbjct: 693 VDQSQSLNIFMAQPTYPKLTSMHFYGFKRGLKTGMYYLRTRPISAAVKFTVDRG------ 746
Query: 781 EKPELVVDDETKMAQVVCSLTNR-EECMACGS 811
+V + + CS T+ +ECM+C +
Sbjct: 747 -----MVSTTKLLQKSSCSPTSEDDECMSCSA 773
>gi|363756368|ref|XP_003648400.1| hypothetical protein Ecym_8305 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891600|gb|AET41583.1| Hypothetical protein Ecym_8305 [Eremothecium cymbalariae
DBVPG#7215]
Length = 870
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/786 (51%), Positives = 547/786 (69%), Gaps = 46/786 (5%)
Query: 16 DKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYA 75
+ ++ L KL+YGL E+ + K+ G+ +GV +L E+ AA+TT HPD++
Sbjct: 11 ETLSKSLTKLAYGLHIEYMNIDEAVHKIMVGIPEGVMERELTMYIGESLAALTTQHPDFS 70
Query: 76 SLAARIAVSNLH-KNTKKSFSETI----------------------KDMYNHYNERSGLK 112
LAARI V+ LH + F++ + + + R+
Sbjct: 71 ILAARIEVAELHGRLAGLKFTDNLSLLVASVPKEGVTGEGEDEEHPRKRQARSSNRNARM 130
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
PLI+ + YE+ MK+ ++ I RD+ + YFG+KTL +SYLLK G V E PQ + M
Sbjct: 131 KPLISKEFYEMAMKHKDIINEAIDSSRDYHFSYFGWKTLCKSYLLKKDGLVHETPQQLFM 190
Query: 173 RVSIGIHK--DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
RV++ IH DDIDS I+TY++MS+++F HASPTLFNAGT LSSCFL+ + DDSI+G
Sbjct: 191 RVALAIHGPFDDIDSVIETYNLMSKKFFIHASPTLFNAGTVHQYLSSCFLLGIIDDSIDG 250
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
IYETL++ A+ISK++GG+G+ V +R +G+ I G+NGTSNG+VPMLRVFN TARYVDQGG
Sbjct: 251 IYETLQKSALISKASGGLGIHVSTVRGSGALISGSNGTSNGLVPMLRVFNSTARYVDQGG 310
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KR GAF +YLEPWH+DIF+FL ++KNHG EE RARDLFY LW+PDLFM RV+ N WSL
Sbjct: 311 NKRPGAFCIYLEPWHSDIFDFLQMRKNHGNEEMRARDLFYGLWIPDLFMRRVEENKDWSL 370
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDT 410
F P+EA GL+DC+G EF++LY YERE K V+AQ +W EIL SQ ETG P+ML+KD
Sbjct: 371 FSPDEAPGLSDCYGKEFDELYESYERELVPMKRVKAQKVWREILQSQTETGGPFMLYKDA 430
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
CN+KSNQ+NLGTI+SSNLC EIIEY+SP ETAVCNLAS+ALP FV +
Sbjct: 431 CNQKSNQKNLGTIRSSNLCCEIIEYSSPEETAVCNLASVALPTFV------------IVS 478
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
GS+ S FD+ KL V ++T+NL+++IDV YPV A +SN ++RP+ IGVQG ADT
Sbjct: 479 GSKIS----FDYAKLHSVVKVITKNLDRVIDVCDYPVPEAEKSNKKNRPMAIGVQGFADT 534
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW 590
++L F+S EA +LN ++FETIY+ A++ S E+A K G YE++ SP S+G+LQ D+W
Sbjct: 535 LMMLRFPFDSKEAARLNVNVFETIYHAAIEASVELAKKYGHYESFPGSPASQGLLQFDLW 594
Query: 591 NVIPSDR----WDWGVLRDMI-SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 645
+ + DW L++ I S G+RNSLLV PMPTASTSQILG E FEP TS IY+
Sbjct: 595 GLNKENHNFLYSDWDKLKEQITSGAGLRNSLLVGPMPTASTSQILGFTESFEPMTSMIYT 654
Query: 646 RRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEI 705
RRVLSGE+ ++NK+++ D +GIW +KN+II D+GS+Q I IP+ LK +YKTVWE+
Sbjct: 655 RRVLSGEYTIINKYMVQDFCTLGIWDEKLKNRIILDNGSIQSIEGIPQHLKDLYKTVWEL 714
Query: 706 KQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAAD 765
Q LVD++ DR +IDQSQSLN+ + +P K+TS+HF +W +GLKTGMYYLR++AA+
Sbjct: 715 PQKRLVDLSRDRAPFIDQSQSLNLFLKEPTMGKLTSMHFYSWKKGLKTGMYYLRTQAASS 774
Query: 766 AIKFTV 771
AIKFT+
Sbjct: 775 AIKFTI 780
>gi|22671562|gb|AAN04389.1|AF451898_94 Rr1 [Heliothis zea virus 1]
Length = 939
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/778 (51%), Positives = 545/778 (70%), Gaps = 38/778 (4%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSY----GLSTEHCDPVLVSQKVCAGVYKGVTTSQLDE 58
+VKR+G E K+ AR+++ L+T + + V G+Y V+T +LD
Sbjct: 8 IVKRNGSVERFDPSKLYARIERCMTMSEPRLTTAFINIAGIVADVEKGLYDRVSTLELDT 67
Query: 59 LAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
L +ET A+M+T HPD++ LAARIA+ LHK T+ FSETI+D+Y +A ++
Sbjct: 68 LLSETCASMSTAHPDHSILAARIAMQALHKRTRSKFSETIRDLY---------EANIVPQ 118
Query: 119 DIYEIIMKNAACLDSEIIYDRDFD-YDYFGFKTLERSYLLKV-QGKVVERPQHMLMRVSI 176
++++ ++A LDS I+ DRDF YF +KTLER+YL+K+ GK+ ER QHM MR ++
Sbjct: 119 YYFDLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIKLADGKICERVQHMYMRTAL 178
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
GIH DI+S I+TY+++S R++ H++PTL +A T R +SC+L+ +K+DSI G+ +TLK
Sbjct: 179 GIHGRDIESVIETYNLLSNRYYVHSTPTLCHAATNRSNYASCYLLELKEDSIGGVMDTLK 238
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
+ A ISK GG+G+ VH +R S I TNG ++G+VPMLR++N +RYV QGG KR GA
Sbjct: 239 DAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGNKRPGA 298
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
AVYLEPWHAD+F+F+ ++KN G EE RARDLFYALWVPDLFM+RV G WSL CP+ +
Sbjct: 299 IAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLMCPDSS 358
Query: 357 SGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSN 416
GL+DCWG EFE YT YE+EG+ + V A+ LW I+T+Q+ETGTPY+L+KDT NR SN
Sbjct: 359 PGLSDCWGEEFEAKYTAYEQEGRYVRRVDARELWKAIVTAQVETGTPYILYKDTVNRNSN 418
Query: 417 QQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSK 476
Q++LGTIK SNLCTEI+EY SP ETAVC LAS+ LP+FV +
Sbjct: 419 QRHLGTIKGSNLCTEIVEYASPDETAVCVLASVNLPKFV--------------------E 458
Query: 477 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+ F+ LA+ +VT NLNKIID YP+ +A +SN +HRPIGIGVQG AD ++G+
Sbjct: 459 GKVFNLNLLAKTVRLVTRNLNKIIDNALYPIPSAAKSNFKHRPIGIGVQGYADALAMMGI 518
Query: 537 AFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD 596
A+E ++ QLN+DIFETIY+ AL S ++A G YE+YH SP S+G L D ++V S
Sbjct: 519 AYE--DSMQLNRDIFETIYHAALTESCQLARVHGVYESYHGSPTSRGELHFDRYSV-HSQ 575
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
+ DW LR I++ G+RNSLLVAPMPTA+TSQ+ GN E FEP+TSN+Y RR SGEF +
Sbjct: 576 KCDWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSGEFQLT 635
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
N HL+ DL + +W+ + I+Y++GS+Q I IPEEL+ IYKTVWEI TL+DMA D
Sbjct: 636 NVHLVRDLERLNLWNDDMAQLIMYNNGSIQNITIIPEELRRIYKTVWEIPTKTLIDMAAD 695
Query: 717 RGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
RG YIDQSQS N+++ +P + ++TS+HF W++GLKTGMYYLR+++A +AI FTVD +
Sbjct: 696 RGAYIDQSQSFNLYVAEPTYSRMTSIHFYAWNKGLKTGMYYLRTKSATNAIPFTVDVN 753
>gi|370702993|ref|YP_004956795.1| orf47 gene product [Helicoverpa zea nudivirus 2]
gi|365199590|gb|AEW69596.1| ribonuclease reductase [Helicoverpa zea nudivirus 2]
Length = 938
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/778 (51%), Positives = 545/778 (70%), Gaps = 38/778 (4%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSY----GLSTEHCDPVLVSQKVCAGVYKGVTTSQLDE 58
+VKR+G E K+ AR+++ L+T + + V G+Y V+T +LD
Sbjct: 8 IVKRNGSVERFDPSKLYARIERCMTMSEPRLTTAFINIAGIVADVEKGLYDRVSTLELDT 67
Query: 59 LAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
L +ET A+M+T HPD++ LAARIA+ LHK T+ FSETI+D+Y +A ++
Sbjct: 68 LLSETCASMSTAHPDHSILAARIAMQALHKRTRSKFSETIRDLY---------EANIVPQ 118
Query: 119 DIYEIIMKNAACLDSEIIYDRDFD-YDYFGFKTLERSYLLKV-QGKVVERPQHMLMRVSI 176
++++ ++A LDS I+ DRDF YF +KTLER+YL+K+ GK+ ER QHM MR ++
Sbjct: 119 YYFDLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIKLADGKICERVQHMYMRTAL 178
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
GIH DI+S I+TY+++S R++ H++PTL +A T R +SC+L+ +K+DSI G+ +TLK
Sbjct: 179 GIHGRDIESVIETYNLLSNRYYVHSTPTLCHAATNRSNYASCYLLELKEDSIGGVMDTLK 238
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
+ A ISK GG+G+ VH +R S I TNG ++G+VPMLR++N +RYV QGG KR GA
Sbjct: 239 DAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGNKRPGA 298
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
AVYLEPWHAD+F+F+ ++KN G EE RARDLFYALWVPDLFM+RV G WSL CP+ +
Sbjct: 299 IAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLMCPDSS 358
Query: 357 SGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSN 416
GL+DCWG EFE YT YE+EG+ + V A+ LW I+T+Q+ETGTPY+L+KDT NR SN
Sbjct: 359 PGLSDCWGEEFEAKYTAYEQEGRYVRRVDARELWKAIVTAQVETGTPYILYKDTVNRNSN 418
Query: 417 QQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSK 476
Q++LGTIK SNLCTEI+EY SP ETAVC LAS+ LP+FV +
Sbjct: 419 QRHLGTIKGSNLCTEIVEYASPDETAVCVLASVNLPKFV--------------------E 458
Query: 477 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+ F+ LA+ +VT NLNKIID YP+ +A +SN +HRPIGIGVQG AD ++G+
Sbjct: 459 GKVFNLNLLAKTVRLVTRNLNKIIDNALYPIPSAAKSNFKHRPIGIGVQGYADALAMMGI 518
Query: 537 AFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD 596
A+E ++ QLN+DIFETIY+ AL S ++A G YE+YH SP S+G L D ++V S
Sbjct: 519 AYE--DSMQLNRDIFETIYHAALTESCQLARVHGVYESYHGSPTSRGELHFDRYSV-HSQ 575
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
+ DW LR I++ G+RNSLLVAPMPTA+TSQ+ GN E FEP+TSN+Y RR SGEF +
Sbjct: 576 KCDWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSGEFQLT 635
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
N HL+ DL + +W+ + I+Y++GS+Q I IPEEL+ IYKTVWEI TL+DMA D
Sbjct: 636 NVHLVRDLERLNLWNDDMAQLIMYNNGSIQNITIIPEELRRIYKTVWEIPTKTLIDMAAD 695
Query: 717 RGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
RG YIDQSQS N+++ +P + ++TS+HF W++GLKTGMYYLR+++A +AI FTVD +
Sbjct: 696 RGVYIDQSQSFNLYVAEPTYSRMTSIHFYAWNKGLKTGMYYLRTKSATNAIPFTVDVN 753
>gi|50310227|ref|XP_455133.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644269|emb|CAG97840.1| KLLA0F01188p [Kluyveromyces lactis]
Length = 855
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/785 (51%), Positives = 547/785 (69%), Gaps = 38/785 (4%)
Query: 10 QEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTT-SQLDELAAETAAAMT 68
+E + DK+ L+ L++ L+ E+ + + +K+ G+ T S+ AET A T
Sbjct: 15 KETFNKDKLKKFLQTLTFSLNAEYIELDTLVEKILVGIPNEPTERSKFVSYVAETVAGST 74
Query: 69 TNHPDYASLAARIAVSNLHK------------NTKKSFSETIKDMYNHYNERSGLKAPLI 116
+ HPDY+ LAAR+ + LH+ +K E +D L LI
Sbjct: 75 SAHPDYSILAARVEIRELHRIIGDATFTENLAKLRKISREVTEDATKRRKITRDLSKNLI 134
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVV-ERPQHMLMRVS 175
+D+ Y+ +K +D I RD+++ YFG+KTL +SYL+K + E PQ M MRV+
Sbjct: 135 SDEFYQYALKFKDKIDQAIDKSRDYNFTYFGWKTLCKSYLMKRNNEQTHETPQFMFMRVA 194
Query: 176 IGIHK--DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
+ IH DDIDS ++T+ +MSQ++F HASPTL N+GT LSSCFLV M+DDSI+GIY+
Sbjct: 195 LAIHGPFDDIDSVLETFELMSQKYFIHASPTLCNSGTVNQYLSSCFLVGMEDDSIDGIYK 254
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
TL + A+ISK++GG+G+ V NIRA G+YI G+NGTSNG+VPMLRVFN+TARYVDQGG KR
Sbjct: 255 TLHKTALISKASGGVGIHVSNIRANGAYISGSNGTSNGLVPMLRVFNNTARYVDQGGNKR 314
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
GAF +YLEPWHADI +FL L+KNHGKEE RARDLFYALW+PDLFM+RV+ N WS+F P
Sbjct: 315 PGAFCIYLEPWHADIIDFLQLRKNHGKEEMRARDLFYALWIPDLFMKRVENNEDWSIFSP 374
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNR 413
+EA GL DC+G EF+KLY YE+E +K ++AQ +W EIL SQ ETG P+ML+KD CN+
Sbjct: 375 DEAPGLTDCYGDEFDKLYERYEKELIPRKKMKAQQIWSEILQSQTETGVPFMLYKDACNK 434
Query: 414 KSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSR 473
KSNQ+NLG IKSSNLC EI+EY+SP E AVCNLAS+ALP +V + S
Sbjct: 435 KSNQKNLGVIKSSNLCCEIVEYSSPEEVAVCNLASVALPTYVN-------------LSSD 481
Query: 474 GSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
G FDF KL V ++ +NL++ IDV YPV AR N+R+RP+ IGVQGLADTF+L
Sbjct: 482 GPP--VFDFVKLHHVVKVLVKNLDRTIDVGKYPVPEARNGNIRNRPLAIGVQGLADTFML 539
Query: 534 LGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVI 593
FES +A LNK IFETIY+ A++ S+E+A G YE++ SP S+G LQ D+W+ +
Sbjct: 540 CRTPFESVDAATLNKQIFETIYHAAIEASTELAELFGHYESFPGSPASEGQLQFDLWS-L 598
Query: 594 PSDRW-----DWGVLRDMISKN-GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
D + DW L+ I+K G+RNSLLV PMPTASTSQILG E FEP TSNIYSRR
Sbjct: 599 NKDNYKFLFDDWDSLKSRITKGKGLRNSLLVGPMPTASTSQILGFTESFEPMTSNIYSRR 658
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
VLSGEF ++N++++ D ++GIW+ +KN+I+ D+GS+Q I IPEE+K +YKTVWE Q
Sbjct: 659 VLSGEFTIINQYMVDDFCQLGIWNEKLKNRILRDNGSIQTIEGIPEEVKNLYKTVWETSQ 718
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
++D++ DR +IDQSQSLN+++ +P K+T++HF TW +GLKTGMYYLR++AA+ AI
Sbjct: 719 RKMIDLSSDRAPFIDQSQSLNLYLREPTMGKLTAMHFYTWKKGLKTGMYYLRTQAASRAI 778
Query: 768 KFTVD 772
+FT++
Sbjct: 779 QFTLN 783
>gi|194377918|dbj|BAG63322.1| unnamed protein product [Homo sapiens]
Length = 570
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/589 (66%), Positives = 467/589 (79%), Gaps = 19/589 (3%)
Query: 223 MKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDT 282
MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+T
Sbjct: 1 MKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNT 60
Query: 283 ARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERV 342
ARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV
Sbjct: 61 ARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRV 120
Query: 343 QTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGT 402
+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGT
Sbjct: 121 ETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIGSQTETGT 180
Query: 403 PYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPV 462
PYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +V
Sbjct: 181 PYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV------- 233
Query: 463 ESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGI
Sbjct: 234 ------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGI 281
Query: 523 GVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSK 582
GVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSK
Sbjct: 282 GVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSK 341
Query: 583 GILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
GILQ DMWNV P+D WDW VL++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSN
Sbjct: 342 GILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSN 401
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTV 702
IY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTV
Sbjct: 402 IYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTV 461
Query: 703 WEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRA 762
WEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R
Sbjct: 462 WEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRP 521
Query: 763 AADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
AA+ I+FT++ K+K + + + E A +VCSL NR+EC+ CGS
Sbjct: 522 AANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 570
>gi|343959472|dbj|BAK63593.1| ribonucleoside-diphosphate reductase large subunit [Pan
troglodytes]
Length = 570
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/589 (66%), Positives = 467/589 (79%), Gaps = 19/589 (3%)
Query: 223 MKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDT 282
MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+T
Sbjct: 1 MKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNT 60
Query: 283 ARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERV 342
ARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV
Sbjct: 61 ARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRV 120
Query: 343 QTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGT 402
+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGT
Sbjct: 121 ETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGT 180
Query: 403 PYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPV 462
PYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +V
Sbjct: 181 PYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV------- 233
Query: 463 ESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGI
Sbjct: 234 ------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGI 281
Query: 523 GVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSK 582
GVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A ++GPYETY SPVSK
Sbjct: 282 GVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSK 341
Query: 583 GILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
GILQ DMWNV P+D WDW +L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSN
Sbjct: 342 GILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSN 401
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTV 702
IY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q IPEIP++LK +YKTV
Sbjct: 402 IYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTV 461
Query: 703 WEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRA 762
WEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R
Sbjct: 462 WEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRP 521
Query: 763 AADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
AA+ I+FT++ K+K + + + E A +VCSL NR+EC+ CGS
Sbjct: 522 AANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 570
>gi|374106763|gb|AEY95672.1| FACR155Wp [Ashbya gossypii FDAG1]
Length = 864
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/791 (51%), Positives = 540/791 (68%), Gaps = 36/791 (4%)
Query: 1 MYVVKRD-GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDEL 59
++++ D G EA K+ L+KL +GL D +++ AG+ + S+L
Sbjct: 7 IFIISDDSGLTEAFDERKLLESLRKLQFGLKINDADIDKAVKRIAAGIGGDIRDSELVAY 66
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHK--------NTKKSFSETIKDMYNHYNERSGL 111
ET A+M T HPD++ LAAR+ + LHK E+ H +R
Sbjct: 67 IGETLASMITRHPDFSLLAARVEIKVLHKRLLGLGFTGNLAVLCESGDSPEGHAAKRKRA 126
Query: 112 KAPL----IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERP 167
+P + ++Y++ +++ +D I DF + YFG+KTL +SYLLK QG+V E P
Sbjct: 127 MSPCTRGPVRRELYDLAVQHRNIIDQAIDDTLDFTFTYFGWKTLCKSYLLKHQGRVHETP 186
Query: 168 QHMLMRVSIGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
Q+M MRV++ +H DID ++TY +M+ ++F HASPTLFNAGT LSSCFL+ + +
Sbjct: 187 QYMFMRVALALHGPSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQFLSSCFLLGIHE 246
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSI+GIY L + A+ISK++GGIG+ V +IRA GSYI GTNGTSNG+VPML VFN TARY
Sbjct: 247 DSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPMLSVFNSTARY 306
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
VDQGG KR GAF +YLEPWHAD+F+FL L++NHGKEE RARDLFY LW+PDLFM+RV+ N
Sbjct: 307 VDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPDLFMKRVENN 366
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYM 405
G+WSLF PNEA GL+DC+G FE+LY YERE + + V+AQ LW EIL SQ ETG P+M
Sbjct: 367 GEWSLFSPNEAVGLSDCYGEAFEQLYVRYERELEPYRRVKAQELWREILLSQTETGGPFM 426
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
L+KD CN KSNQ+NLGTIKSSNLC EI+EY+S E AVCNLAS+ALP FV
Sbjct: 427 LYKDACNSKSNQKNLGTIKSSNLCCEIVEYSSRDEVAVCNLASVALPTFV---------- 476
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
S S FD+ +L V ++T NL+K ID+ YPV A RSN +HRP+ +GVQ
Sbjct: 477 ------SVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDYPVPEAERSNKKHRPLALGVQ 530
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
GLAD F+L+ F EA Q+N++IFETIY+ A++TS E+AA+ G Y ++ SP SKG L
Sbjct: 531 GLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGAYASFVGSPASKGEL 590
Query: 586 QPDMWNVIPSDRW----DWGVLRDMI-SKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
Q D+W + DW L++ I S G+RNSLLV PMPTASTSQILG E FEP T
Sbjct: 591 QFDLWGRNKDNYQFLYDDWDELKEKIKSGPGLRNSLLVGPMPTASTSQILGFTESFEPMT 650
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYK 700
S IY+RRVLSGE+ +VNK+++ D ++GIWS +KN+II D GS+Q I IP +LK +YK
Sbjct: 651 SMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKDGGSIQGIDGIPPDLKDLYK 710
Query: 701 TVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRS 760
TVWE+ Q L+D++ DR ++DQSQSLN+ + +P K+TS+HF W +GLKTGMYYLR+
Sbjct: 711 TVWELPQRKLIDLSADRAPFVDQSQSLNLFLKEPTMGKLTSMHFYAWKKGLKTGMYYLRT 770
Query: 761 RAAADAIKFTV 771
+AAA+AI+FT+
Sbjct: 771 QAAANAIQFTL 781
>gi|45185841|ref|NP_983557.1| ACR155Wp [Ashbya gossypii ATCC 10895]
gi|44981631|gb|AAS51381.1| ACR155Wp [Ashbya gossypii ATCC 10895]
Length = 864
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/791 (51%), Positives = 540/791 (68%), Gaps = 36/791 (4%)
Query: 1 MYVVKRD-GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDEL 59
++++ D G EA K+ L+KL +GL D +++ AG+ + S+L
Sbjct: 7 IFIISDDSGLTEAFDERKLLESLRKLQFGLKINDADIDKAVKRIAAGIGGDIRDSELVAY 66
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHK--------NTKKSFSETIKDMYNHYNERSGL 111
ET A+M T HPD++ LAAR+ + LHK E+ H +R
Sbjct: 67 IGETLASMITRHPDFSLLAARVEIKVLHKRLLGLGFTGNLAVLCESGDSPEGHATKRKRA 126
Query: 112 KAPL----IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERP 167
+P + ++Y++ +++ +D I DF + YFG+KTL +SYLLK QG+V E P
Sbjct: 127 MSPCTRGPVRRELYDLAVQHRNIIDQAIDDTLDFTFTYFGWKTLCKSYLLKHQGRVHETP 186
Query: 168 QHMLMRVSIGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
Q+M MRV++ +H DID ++TY +M+ ++F HASPTLFNAGT LSSCFL+ + +
Sbjct: 187 QYMFMRVALALHGPSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQFLSSCFLLGIHE 246
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSI+GIY L + A+ISK++GGIG+ V +IRA GSYI GTNGTSNG+VPML VFN TARY
Sbjct: 247 DSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPMLSVFNSTARY 306
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
VDQGG KR GAF +YLEPWHAD+F+FL L++NHGKEE RARDLFY LW+PDLFM+RV+ N
Sbjct: 307 VDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPDLFMKRVENN 366
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYM 405
G+WSLF PNEA GL+DC+G FE+LY YERE + + V+AQ LW EIL SQ ETG P+M
Sbjct: 367 GEWSLFSPNEAVGLSDCYGEAFEQLYVRYERELEPYRRVKAQELWREILLSQTETGGPFM 426
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
L+KD CN KSNQ+NLGTIKSSNLC EI+EY+S E AVCNLAS+ALP FV
Sbjct: 427 LYKDACNSKSNQKNLGTIKSSNLCCEIVEYSSRDEVAVCNLASVALPTFV---------- 476
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
S S FD+ +L V ++T NL+K ID+ YPV A RSN +HRP+ +GVQ
Sbjct: 477 ------SVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDYPVPEAERSNKKHRPLALGVQ 530
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
GLAD F+L+ F EA Q+N++IFETIY+ A++TS E+AA+ G Y ++ SP SKG L
Sbjct: 531 GLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGVYASFVGSPASKGEL 590
Query: 586 QPDMWNVIPSDRW----DWGVLRDMI-SKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
Q D+W + DW L++ I S G+RNSLLV PMPTASTSQILG E FEP T
Sbjct: 591 QFDLWGRNKDNYQFLYDDWDELKEKIKSGPGLRNSLLVGPMPTASTSQILGFTESFEPMT 650
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYK 700
S IY+RRVLSGE+ +VNK+++ D ++GIWS +KN+II D GS+Q I IP +LK +YK
Sbjct: 651 SMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKDGGSIQGIDGIPPDLKDLYK 710
Query: 701 TVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRS 760
TVWE+ Q L+D++ DR ++DQSQSLN+ + +P K+TS+HF W +GLKTGMYYLR+
Sbjct: 711 TVWELPQRKLIDLSADRAPFVDQSQSLNLFLKEPTMGKLTSMHFYAWKKGLKTGMYYLRT 770
Query: 761 RAAADAIKFTV 771
+AAA+AI+FT+
Sbjct: 771 QAAANAIQFTL 781
>gi|303391084|ref|XP_003073772.1| ribonucleoside diphosphate reductase [Encephalitozoon intestinalis
ATCC 50506]
gi|303302920|gb|ADM12412.1| ribonucleoside diphosphate reductase [Encephalitozoon intestinalis
ATCC 50506]
Length = 768
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/764 (50%), Positives = 543/764 (71%), Gaps = 29/764 (3%)
Query: 9 RQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMT 68
+ E + D + ++++ + L +H + + +K+ +G + +T ++ + +ETAA+M
Sbjct: 11 KSEKLKIDMVRGQIEEYTNLLKLQHVNVDELMEKIASGWCEDMTRKEIVDYCSETAASMI 70
Query: 69 TNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNA 128
T HP+Y +++RI VS +H T SF E IK + + I++++Y+II++NA
Sbjct: 71 TKHPEYGWISSRIIVSYIHDITMDSFVEKIKYIQKYQGT--------ISEEMYKIIVENA 122
Query: 129 ACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIK 188
+DS I Y++DF ++YFG TL +SYL+KV ++VERPQ + MR ++ +HK D +
Sbjct: 123 EIIDSIIDYEKDFLFNYFGILTLMKSYLIKVGEEIVERPQDVFMRTALQVHKSDFGKVKE 182
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGI 248
TY M+S+ +FTHA+PTL+N+ QL+SCFL+ ++DSIEG+Y + + A+I+K +GGI
Sbjct: 183 TYEMLSRHYFTHATPTLYNSCLKEAQLASCFLITPREDSIEGVYHMINQTAIITKYSGGI 242
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H IR+ GS ++ T G SNGI+P+++V N T RY++QG +R G+ A+YLEPWH +I
Sbjct: 243 GLNLHGIRSKGSPLKRTGGKSNGIIPLIQVLNATKRYINQGAERRPGSIAIYLEPWHMEI 302
Query: 309 FEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFE 368
F+FL+L+KN G EE RARD+F ALW+ DLFMERV+ N +WSLFCP++A GL + WG EF
Sbjct: 303 FDFLDLRKNTGPEEFRARDIFIALWINDLFMERVKNNEEWSLFCPSQAVGLNETWGEEFN 362
Query: 369 KLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNL 428
LY YE+ ++ VV AQ LW I+ +QIETGTPYM +KD CNR SNQQ+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGTIKSSNL 421
Query: 429 CTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEV 488
C EI+EY+S ET+VCNL SI+LP FV KN+ FDFE L +V
Sbjct: 422 CAEIVEYSSGEETSVCNLGSISLPMFV--------------------KNKKFDFESLKDV 461
Query: 489 TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNK 548
I+T NLNK+ID NYYPVE ++RSN++HRPIGIGVQGLAD F +L + F+S EA+ LNK
Sbjct: 462 VRILTINLNKVIDFNYYPVEESKRSNMKHRPIGIGVQGLADLFAILRLPFDSDEARNLNK 521
Query: 549 DIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMIS 608
DIFET+YY AL+TS ++A KEGP+E+Y SP+SKGI ++ S+ WDW LR+ I
Sbjct: 522 DIFETMYYSALETSCKLAEKEGPFESYEGSPISKGIFHFELAGKKASNNWDWEGLRERIK 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
K G RNSLL+A MPTA TSQI GNNE FEP+ SNIY+RR +GEF +VNKHL++DL+E+G
Sbjct: 582 KYGTRNSLLIALMPTAGTSQIFGNNETFEPFISNIYTRRTHAGEFQIVNKHLINDLSELG 641
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+WS +KN II ++GS+Q I IP++++ IYKT WEIK ++D+A DR ++DQSQSLN
Sbjct: 642 LWSYEMKNLIIENEGSIQNITTIPKKIRDIYKTAWEIKMKAVIDLAADRQVFVDQSQSLN 701
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+ + +P + ++TS+HF + GLKTGMYYLR+R AIKFTVD
Sbjct: 702 VFVAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVD 745
>gi|307169039|gb|EFN61884.1| Ribonucleoside-diphosphate reductase large subunit [Camponotus
floridanus]
Length = 744
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/755 (53%), Positives = 526/755 (69%), Gaps = 22/755 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGR+E VHFD+ITAR+K L Y L + DP +++ +V +Y GVTT +LD LA
Sbjct: 1 MHVLKRDGRKEPVHFDEITARIKTLCYDLDMNYVDPSIIALRVITDLYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
+E AA+M HPDYA LAARIA+SNLHK TKK+FSE I D+Y+ N + + P+I++
Sbjct: 61 SEIAASMINQHPDYAILAARIAISNLHKETKKTFSEVIADLYDAKNSITNKRLPIISEKY 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II NA L+S IIYDRDF+Y Y +K LE ++LLK+ GKVVERPQHMLMRV+I IH
Sbjct: 121 YKIIQSNADKLNSAIIYDRDFNYSYTTYKMLETNHLLKLNGKVVERPQHMLMRVAIAIHD 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDID AI+TY+ +S+++F + + TL A T Q++S FL+ M DSI+GI +TL+ AV
Sbjct: 181 DDIDKAIETYNFLSKQYFIYPAQTLDTACTVTQQMASSFLLTMSGDSIDGILDTLERSAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+ G IG +VH IRA + IRGT G SNG+VPML+ +N + V + K VY
Sbjct: 241 LCHYNGDIGFNVHCIRAKNTPIRGTGGVSNGLVPMLKAYNTSIATVSR---KNTEQVTVY 297
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+LKKN G+E+ RA+D+FYALW PDLFM+R+ + WSL CP+E L
Sbjct: 298 LEPWHADIFEFLDLKKNIGEEKLRAKDMFYALWTPDLFMQRIFNDDVWSLMCPHECPDLI 357
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFE LYT YE+EG+ +K ++A++LW I+ +Q ETGTPY+++KD CNRK+N QNL
Sbjct: 358 EAYGEEFELLYTRYEKEGRFRKQIKARDLWLLIIQTQFETGTPYIVYKDHCNRKTNHQNL 417
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK S TEII+Y+S E A+CN ASIA+ FV P++ + F
Sbjct: 418 GTIKCSGFSTEIIQYSSSDEIAMCNTASIAVNMFVD----PIK--------------KTF 459
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL E+ IVT NL+K+ID N+YP+ + S +HR IGIGVQGLAD FIL+ FES
Sbjct: 460 DFNKLKEIVKIVTYNLDKMIDANFYPLPEIKLSCEKHRSIGIGVQGLADAFILMRYPFES 519
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA++LN IFET+YY AL+ S EIA K+G Y +Y SP+SKG+LQ DMWN P+D WDW
Sbjct: 520 QEARKLNIQIFETLYYGALEASCEIAIKKGSYVSYKGSPISKGMLQYDMWNAKPTDLWDW 579
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+A M A +Q+L NN EPYTSNIY LS +F +V L
Sbjct: 580 NTLKKKIEEHGVRNSLLIAQMSDAFMAQMLENNVSVEPYTSNIYVIHALSKQFRIVKPRL 639
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E +W I NKII +DGS+Q I +IP ELK++YKT WE+ Q T+ DMA RG +
Sbjct: 640 LRDLIEKKLWDENICNKIINNDGSIQNIEDIPNELKLLYKTAWEMPQKTIFDMAACRGPF 699
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
IDQSQ LN+HM P +K+TS+HF W GLK+ +
Sbjct: 700 IDQSQCLNVHMIDP-LEKLTSMHFYAWENGLKSSI 733
>gi|260945435|ref|XP_002617015.1| hypothetical protein CLUG_02459 [Clavispora lusitaniae ATCC 42720]
gi|238848869|gb|EEQ38333.1| hypothetical protein CLUG_02459 [Clavispora lusitaniae ATCC 42720]
Length = 878
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/729 (53%), Positives = 520/729 (71%), Gaps = 22/729 (3%)
Query: 51 VTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSG 110
+T +QL EL AET A +PD+A LA R+ + + FS + N S
Sbjct: 52 LTVNQLLELVAETLAQRVVQNPDFALLAGRVEAYRVQRLVVSPFSTNFSRLENGSKTESK 111
Query: 111 LKAPL--IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
+K L ++ D E + +N+ LD + +RD ++ YFG +TL +SY L++ V E PQ
Sbjct: 112 IKMDLGLVSKDAAEFVARNSDYLDKLVRPERDMNFTYFGMRTLCKSYFLQIDNVVAETPQ 171
Query: 169 HMLMRVSIGIH-----KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCM 223
++ +RV+IG+H K+ + + Y +MS+++ +SPTLF+AGT LSSCFL+ +
Sbjct: 172 YLFLRVAIGLHGKLDDKNALQRVSEIYDLMSEKYLIFSSPTLFSAGTNNNFLSSCFLMGI 231
Query: 224 KDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTA 283
K+DSI+GI++TL A+ISK +GG+G+ VHNIR+ GS I +NGTSNG+VPML+VFN+TA
Sbjct: 232 KEDSIDGIFKTLHSAALISKGSGGLGIHVHNIRSNGSAISSSNGTSNGLVPMLKVFNNTA 291
Query: 284 RYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQ 343
RYVDQGG KR GAFA+Y+EPWH DI E L L+KNHG +E RARDLF+ALW+PDLFM+RV+
Sbjct: 292 RYVDQGGNKRPGAFAIYIEPWHGDIMEVLELRKNHGPDELRARDLFFALWIPDLFMKRVK 351
Query: 344 TNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTP 403
NG+WSLF P++A GL+D +G EFE LY YE E A ++A+ LW IL +Q ETG P
Sbjct: 352 NNGKWSLFSPSKAPGLSDVYGEEFESLYQKYEEEDLACTTIEARKLWMHILQAQTETGMP 411
Query: 404 YMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVE 463
+ML+KD CNRKSNQ NLGTIKSSNLC EI+EY+SP ETAVCNLAS+ LP FV +
Sbjct: 412 FMLYKDACNRKSNQMNLGTIKSSNLCCEIVEYSSPEETAVCNLASLGLPTFVTANE---- 467
Query: 464 SHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIG 523
+ N FDF+KL +VT I+ +L+++IDV YP+++A+ SNL+HRPI IG
Sbjct: 468 -----------NGNVAFDFKKLHKVTKILARSLDRVIDVTKYPIKSAKVSNLKHRPIAIG 516
Query: 524 VQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKG 583
VQGLADTF+ L + F+S EA LN IFETIY+ A+++S E++ ++G YE++ SP SKG
Sbjct: 517 VQGLADTFLELRLPFDSAEAATLNSQIFETIYHAAIESSMELSKEKGYYESFEGSPASKG 576
Query: 584 ILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNI 643
LQ D+WN P DW L++ + K G+RNSLLVA MPTASTSQILG NECFEP+TSNI
Sbjct: 577 KLQFDLWNYKPDFFDDWDELKEQVKKYGLRNSLLVAAMPTASTSQILGFNECFEPFTSNI 636
Query: 644 YSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVW 703
Y+RRVLSGEF VVNK+L+ DL +GIW+ +K+ II ++GSVQ I IP++LK +YKTVW
Sbjct: 637 YNRRVLSGEFQVVNKYLVKDLRALGIWNKAVKDMIIMNNGSVQNIDIIPQKLKKLYKTVW 696
Query: 704 EIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAA 763
EI Q +V +A +RG +IDQSQS+NIH+ P F +TS HF W +GLKTGMYYLR++AA
Sbjct: 697 EISQKHIVRLAAERGRFIDQSQSMNIHLMNPTFGTLTSCHFFAWEQGLKTGMYYLRTQAA 756
Query: 764 ADAIKFTVD 772
A AI+FTVD
Sbjct: 757 ARAIQFTVD 765
>gi|118197505|ref|YP_874319.1| ribonucleotide reductase large subunit [Ectropis obliqua NPV]
gi|37039662|gb|AAQ88175.1| ribonucleotide reductase large subunit [Ectropis obliqua NPV]
Length = 760
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/776 (50%), Positives = 544/776 (70%), Gaps = 32/776 (4%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V KRD ++ KI L+ LS L+ D + ++ + V+TSQL L A
Sbjct: 4 VTKRDNAKQCFDQKKIVKTLQNLSVDLNKNLIDCEALVAQLKKTLVSNVSTSQLCVLLAR 63
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
+A+M H +YA LA R+ V + HK ++ + ++YN L++ Y+
Sbjct: 64 ESASMAYIHDEYAMLAGRLMVIDNHKQVSDDYAVVVDNLYNQ---------NLVSAQFYK 114
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
+ N +++ + Y+ D+DY YFGFKTLE YL ++GKV ER QHM MRV++ IH +D
Sbjct: 115 SAIANMHTINATLNYNLDYDYKYFGFKTLENGYLKTIEGKVAERIQHMYMRVALTIHGND 174
Query: 183 IDSAIK----TYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
D I+ TY++M+ + +THASPTLF +G+ QL+SCFL+ +K+DSI GIYETL++C
Sbjct: 175 TDDCIENVFETYNLMAHKMYTHASPTLFASGSCYAQLASCFLLNIKEDSIVGIYETLRDC 234
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK GGIG+SVHN+RA GS+I TNGT+NG+ MLRV+N+ R+VDQGG KRKGA A
Sbjct: 235 ALISKFGGGIGLSVHNVRARGSFIESTNGTANGLEAMLRVYNNAVRHVDQGG-KRKGAMA 293
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
+Y+EPWHADI++FL LK+N G E+ +ARDL YALWVPDLFM+RV+ +G WSL CP E+
Sbjct: 294 IYVEPWHADIYDFLELKRNMGAEDRKARDLLYALWVPDLFMKRVEADGMWSLMCPRESPL 353
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L G+EFE+LY YE+ GK + ++A++L+ I+ +Q+ETGTPYM++KD CN KSNQ+
Sbjct: 354 LDTVHGSEFEQLYVAYEKCGKFVRQIKARDLFRTIVETQVETGTPYMMYKDACNMKSNQK 413
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
+LGTIK+SNLC EI+EY+ E+AVCNLASI + +FV D+ V
Sbjct: 414 HLGTIKNSNLCAEIVEYSDKNESAVCNLASICVNQFV---DIDVGE-------------- 456
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
++FE L VT IV +NLNKIID+NYYP+ +A++SN +HRPIG+G+QGLADTF +L M +
Sbjct: 457 -YNFEMLKYVTKIVVKNLNKIIDINYYPLLSAQKSNRKHRPIGVGIQGLADTFAMLRMPY 515
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW 598
ES +A+ LN I ETIY+ AL+ S E+A G +++Y +SP S GILQ D+WN P+ W
Sbjct: 516 ESDQAKVLNTKIAETIYFGALEASCELAKAYGVHDSYFSSPASLGILQYDLWNHTPTSMW 575
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW L+ I ++G+RNSL VA MPTA+T+QILGNNE FEP+T+NIY RRVL+G+F V+NK
Sbjct: 576 DWTQLKKDIKQHGLRNSLCVAYMPTATTAQILGNNESFEPFTNNIYVRRVLAGDFQVINK 635
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
+L DL ++ +++ ++NKII ++GSVQ I EIP+ ++ +YKTVWE+K L+ MA DRG
Sbjct: 636 YLTDDLIKLNLYNEQMRNKIIANNGSVQNIEEIPKHVRELYKTVWEMKVKNLIGMAADRG 695
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
+IDQSQS NI + QP + +T++H TW GLKTGMYYLR++ AADAIKFTVD S
Sbjct: 696 PFIDQSQSFNIFLSQPTYALLTTIHMHTWKSGLKTGMYYLRTKPAADAIKFTVDKS 751
>gi|396082286|gb|AFN83896.1| ribonucleoside diphosphate reductase [Encephalitozoon romaleae
SJ-2008]
Length = 769
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/764 (50%), Positives = 540/764 (70%), Gaps = 29/764 (3%)
Query: 9 RQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMT 68
+ E V D + ++++ + L+ +H + + K+ +G +G+T ++ + +ETAA+M
Sbjct: 12 KSEKVGIDGVRGQIEEYAKTLNLKHVNVSELMDKIISGWCEGMTKKEVVDYCSETAASMI 71
Query: 69 TNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNA 128
T HP+Y +++RI VS +H+ T SFSE IK + H I++++Y II+++
Sbjct: 72 TKHPEYGRISSRIIVSYIHEVTMNSFSEKIKYIQEHRG--------TISEEMYGIILEHK 123
Query: 129 ACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIK 188
+D+ I Y+ D+ ++YFG TL +SY+++V ++VERPQ + MR ++ IHK + +
Sbjct: 124 ETIDAMINYENDYLFNYFGMLTLMKSYMIRVGDEIVERPQDVFMRTALQIHKTNFKRVKE 183
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGI 248
TY M+S+ +FTHA+PTL+N+ PQL+SCFL+ K+DSIEG+Y T+ + A+I+K +GGI
Sbjct: 184 TYDMLSRHYFTHATPTLYNSCLKNPQLASCFLITPKEDSIEGVYHTINQTAIITKFSGGI 243
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H+IRA GS ++ T G SNGI+P+++VFN T RY++QG +R G+ A+YLEPWH +I
Sbjct: 244 GLNLHSIRAKGSALKNTGGKSNGIIPLIQVFNATKRYINQGAERRPGSIAIYLEPWHMEI 303
Query: 309 FEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFE 368
F+FL+++K+ G EE RARD+F ALWV DLFMERV+ + +WSLFCP++A GL D WG EF
Sbjct: 304 FDFLDIRKSTGPEEFRARDIFIALWVNDLFMERVKNDEEWSLFCPSQAVGLEDMWGEEFN 363
Query: 369 KLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNL 428
+LY YE+ ++ VV AQ LW I+ +QIETGTPYM +KD CNR SNQQ+LG IKSSNL
Sbjct: 364 ELYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGIIKSSNL 422
Query: 429 CTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEV 488
CTEI+EY+S E +VCNLASI+LP FV KN FDFE V
Sbjct: 423 CTEIVEYSSGDEVSVCNLASISLPMFV--------------------KNGMFDFESFRNV 462
Query: 489 TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNK 548
I+T NLNK+ID +YYPVE A+ SN++HRPIGIGVQGLAD F +L + FES EA+ LNK
Sbjct: 463 VRIITINLNKVIDSSYYPVEEAKTSNMKHRPIGIGVQGLADLFAILKLPFESDEARSLNK 522
Query: 549 DIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMIS 608
+IFE +YY AL+ S E+A EGP+ +Y SP+SKGI ++ S++WDW LR+ I
Sbjct: 523 EIFEAMYYFALEASCELAESEGPFPSYKGSPISKGIFHFELAGKKASNKWDWEGLRERIK 582
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
K+G RNSLL+A MPTA TSQI GNNE FEPY SNIY+RR +GEF +VN++L+ DL ++G
Sbjct: 583 KHGTRNSLLIALMPTAGTSQIFGNNEAFEPYASNIYTRRTHAGEFQIVNQYLIDDLVKLG 642
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+WS +KN II ++GS+Q I IP +++ IYKT WEIK +++D+A DR +IDQSQSLN
Sbjct: 643 LWSYEMKNLIIENEGSIQNIISIPPKIREIYKTAWEIKMRSVIDLAADRQAFIDQSQSLN 702
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
I + +P + ++TS+HF + GLKTGMYYLR+R AIKFTVD
Sbjct: 703 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVD 746
>gi|401827749|ref|XP_003888167.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
gi|392999367|gb|AFM99186.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
Length = 769
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/764 (50%), Positives = 538/764 (70%), Gaps = 29/764 (3%)
Query: 9 RQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMT 68
R E + + + ++++ + L +H D + K+ +G + +T ++ + +ETAA+M
Sbjct: 11 RTEKLGIEGVRGQIEEYARILDLKHVDVNELMDKIISGWCEDMTRKEVMDYCSETAASMI 70
Query: 69 TNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNA 128
T HP+Y +++RI VS +H+ T SFSE IK + H I++++YEII++N
Sbjct: 71 TKHPEYGRISSRIVVSYIHEVTMDSFSEKIKYIQKHRG--------TISEEMYEIILENK 122
Query: 129 ACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIK 188
+D+ I Y+ DF + YFG TL +SYL++V ++VERPQ + MR ++ IHK D + +
Sbjct: 123 ETIDAMINYENDFLFSYFGILTLMKSYLIRVGDEIVERPQDVFMRTALQIHKTDFERVKE 182
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGI 248
TY M+S+ +FTHA+PTL+N+ PQL+SCFL+ K+DSIEG+Y + + A+I+K +GGI
Sbjct: 183 TYDMLSEHYFTHATPTLYNSCLKNPQLASCFLISPKEDSIEGVYHMVNQAAIITKYSGGI 242
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H+IR+ GS ++ T G SNGIVP+++VFN T RY++QG +R G+ A+YLEPWH +I
Sbjct: 243 GLNLHSIRSKGSPLKNTGGRSNGIVPLIQVFNATKRYINQGAERRPGSIAIYLEPWHMEI 302
Query: 309 FEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFE 368
F+FL+++KN G E+ RARD+F ALWV DLFMERV+ N +WSLFCP++A GL + WG EF
Sbjct: 303 FDFLDIRKNTGPEDLRARDMFIALWVNDLFMERVKNNEEWSLFCPSQAVGLDEVWGEEFN 362
Query: 369 KLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNL 428
LY YE+ ++ VV AQ LW I+ +QIETGTPYM +KD CNR SN Q+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNMQHLGTIKSSNL 421
Query: 429 CTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEV 488
C EI+EY+S ET+VCNLASI+LP+FV KN FDFE +
Sbjct: 422 CAEIVEYSSGDETSVCNLASISLPKFV--------------------KNGVFDFESFRSI 461
Query: 489 TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNK 548
I+T NLN++ID +YYP+E A+ SN+RHRPIGIGVQGLAD F +L FES EA++LNK
Sbjct: 462 VRIITINLNRVIDWSYYPIEEAKTSNMRHRPIGIGVQGLADLFAILRFPFESDEARKLNK 521
Query: 549 DIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMIS 608
+IFE +YY AL+ S E+A EGP+E+Y S +SKGI ++ S++WDW LR+ I
Sbjct: 522 EIFEAMYYSALEASCELAEAEGPFESYEGSSISKGIFHFELAGKKASNKWDWEGLRERIK 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
+ G RNSLL+A MPT+ TSQI GNNE FEPY SNIY+RR +GEF +VN++L+ DL ++G
Sbjct: 582 RYGTRNSLLIALMPTSGTSQIFGNNEAFEPYASNIYTRRTHAGEFQIVNQYLIDDLVKLG 641
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+WS +KN I+ ++GS+Q I IP +++ IYKTVWEIK +++D+A DR +IDQSQSLN
Sbjct: 642 LWSYEMKNLIVENEGSIQNITSIPSKIREIYKTVWEIKMKSVIDLAADRQAFIDQSQSLN 701
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
I + +P + ++TS+HF + GLKTGMYYLR+R AIKFTVD
Sbjct: 702 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVD 745
>gi|19074701|ref|NP_586207.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE [Encephalitozoon cuniculi
GB-M1]
gi|51701818|sp|Q8SR37.1|RIR1_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase
gi|19069343|emb|CAD25811.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE [Encephalitozoon cuniculi
GB-M1]
Length = 768
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/764 (50%), Positives = 533/764 (69%), Gaps = 29/764 (3%)
Query: 9 RQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMT 68
+ E + D I +R++ L H D + +++ +G + +T + + +ETAA+M
Sbjct: 11 KSEKLGIDLIRSRIEGYVKDLKLRHVDVDELVERIVSGWCEDMTRKETIDYCSETAASMI 70
Query: 69 TNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNA 128
T HP+Y +++RI VS +H+ T SF E IK + H ++++++Y II+++
Sbjct: 71 TKHPEYGQISSRIIVSYIHEITMDSFVEKIKYIQKHRG--------MVSEEMYGIILEHG 122
Query: 129 ACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIK 188
++ I Y+ DF + YFG TL +SYL+KV +++ERPQ M MRV++ IHK D + +
Sbjct: 123 ETIEGMINYENDFLFSYFGILTLMKSYLIKVGEEIIERPQDMFMRVALQIHKTDFEKVRE 182
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGI 248
Y+++S +FTHA+PTL+N+ PQL+SCFL+ ++DSIEG+Y + + A+I+K +GGI
Sbjct: 183 VYNLLSGHYFTHATPTLYNSCLKNPQLASCFLITPREDSIEGVYHMINQAAIITKYSGGI 242
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H IR+ GS +R T G SNGI+P+++V N T RY++QG +R G+ A++LEPWH +I
Sbjct: 243 GLNLHGIRSKGSSLRSTGGRSNGIIPLIQVLNATKRYINQGAERRPGSIAIFLEPWHMEI 302
Query: 309 FEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFE 368
F+FL L+KN G EE RARD+F ALW+ DLFMERV+ N +WSLFCP++A GL+D WG EF
Sbjct: 303 FDFLELRKNTGPEEFRARDIFTALWINDLFMERVKNNEEWSLFCPSQAVGLSDVWGEEFN 362
Query: 369 KLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNL 428
LY YE+ ++ VV AQ LW I+ +QIETGTPYM +KD CNR SNQQ+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGTIKSSNL 421
Query: 429 CTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEV 488
C EI+EY+S ET+VCNLASI LP FV K+ +FDFE V
Sbjct: 422 CAEIVEYSSGEETSVCNLASICLPMFV--------------------KDGWFDFEAFRRV 461
Query: 489 TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNK 548
I+T NLN++ID NYYPVE ARRSN+R+RPIGIGVQGLAD F +L +AFES A+ LN+
Sbjct: 462 VKILTVNLNRVIDFNYYPVEEARRSNMRNRPIGIGVQGLADLFAILRLAFESDGARSLNQ 521
Query: 549 DIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMIS 608
DIFE +YY A++ S E+A KEGP+ +Y SP+SKGI ++ S WDW LR+ I
Sbjct: 522 DIFEAMYYSAMEASCELAEKEGPFPSYEGSPISKGIFHFELAGRKASGNWDWEGLRERIR 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
++GVRNSLL+A MPTA TSQI GNNE FEP+ SNIY+RR +GEF +VN+HL++DL +G
Sbjct: 582 RHGVRNSLLIALMPTAGTSQIFGNNEAFEPHASNIYTRRTHAGEFQIVNQHLVNDLVRLG 641
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+WS +KN +I ++GS+Q I IP E++ IYKT WEIK +++D+A DR ++DQSQSLN
Sbjct: 642 LWSYEMKNLVIENEGSIQNITSIPHEIREIYKTAWEIKMKSVIDLAADRQVFVDQSQSLN 701
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
I + +P + ++TS+HF + GLKTGMYYLR+R AIKFTVD
Sbjct: 702 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVD 745
>gi|449329866|gb|AGE96134.1| ribonucleoside diphosphate reductase [Encephalitozoon cuniculi]
Length = 768
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/764 (49%), Positives = 532/764 (69%), Gaps = 29/764 (3%)
Query: 9 RQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMT 68
+ E + D I +R++ L H D + +++ +G + +T + + +ETAA+M
Sbjct: 11 KSEKLGIDLIRSRIEGYVKDLKLRHVDVDELVERIVSGWCEDMTRKETIDYCSETAASMI 70
Query: 69 TNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNA 128
T HP+Y +++RI VS +H+ T SF E IK + H ++++++Y II+++
Sbjct: 71 TKHPEYGQISSRIIVSYIHEITMDSFVEKIKYIQKHRG--------MVSEEMYGIILEHG 122
Query: 129 ACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIK 188
++ I Y+ DF + YFG TL +SYL+KV +++ERPQ M MRV++ IHK D + +
Sbjct: 123 ETIEGMINYENDFLFSYFGILTLMKSYLIKVGEEIIERPQDMFMRVALQIHKTDFEKVRE 182
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGI 248
Y+++S +FTHA+PTL+N+ PQL+SCFL+ ++DSIEG+Y + + A+I+K +GGI
Sbjct: 183 VYNLLSGHYFTHATPTLYNSCLKNPQLASCFLITPREDSIEGVYHMINQAAIITKYSGGI 242
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H IR+ GS +R T G SNGI+P+++V N T RY++QG +R G+ A++LEPWH +I
Sbjct: 243 GLNLHGIRSKGSSLRSTGGRSNGIIPLIQVLNATKRYINQGAERRPGSIAIFLEPWHMEI 302
Query: 309 FEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFE 368
F+FL L+KN G EE RARD+F ALW+ DLFMERV+ N +WSLFCP++A GL+D WG EF
Sbjct: 303 FDFLELRKNTGPEEFRARDIFTALWINDLFMERVKNNEEWSLFCPSQAVGLSDVWGEEFN 362
Query: 369 KLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNL 428
LY YE+ ++ VV AQ LW I+ +QIETGTPYM +KD CNR SNQQ+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGTIKSSNL 421
Query: 429 CTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEV 488
C EI+EY+S ET+VCNLASI LP FV++ FDFE V
Sbjct: 422 CAEIVEYSSGEETSVCNLASICLPMFVKDGG--------------------FDFEAFRRV 461
Query: 489 TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNK 548
I+T NLN++ID NYYPVE ARRSN+R+RPIGIGVQGLAD F +L +AFES A+ LN+
Sbjct: 462 VKILTVNLNRVIDFNYYPVEEARRSNMRNRPIGIGVQGLADLFAILRLAFESDGARSLNQ 521
Query: 549 DIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMIS 608
DIFE +YY A++ S E+A KEGP+ +Y SP+SKGI ++ S WDW LR+ I
Sbjct: 522 DIFEAMYYSAMEASCELAEKEGPFPSYEGSPISKGIFHFELAGRKASGNWDWEGLRERIR 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
++GVRNSLL+A MPTA TSQI GNNE FEP+ SNIY+RR +GEF +VN+HL++DL +G
Sbjct: 582 RHGVRNSLLIALMPTAGTSQIFGNNEAFEPHASNIYTRRTHAGEFQIVNQHLVNDLVRLG 641
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+WS +KN +I ++GS+Q I IP E++ IYKT WEIK +++D+A DR ++DQSQSLN
Sbjct: 642 LWSYEMKNLVIENEGSIQNITSIPHEIREIYKTAWEIKMKSVIDLAADRQVFVDQSQSLN 701
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
I + +P + ++TS+HF + GLKTGMYYLR+R AIKFTVD
Sbjct: 702 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVD 745
>gi|300706935|ref|XP_002995698.1| hypothetical protein NCER_101343 [Nosema ceranae BRL01]
gi|239604894|gb|EEQ82027.1| hypothetical protein NCER_101343 [Nosema ceranae BRL01]
Length = 738
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/783 (50%), Positives = 533/783 (68%), Gaps = 45/783 (5%)
Query: 29 LSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHK 88
+S ++ D KV G + +++ ++ +ETAA+M T +P+Y L+ARI + +LH+
Sbjct: 1 MSLQNVDKNYFIDKVYNGWCEDMSSFEMITFVSETAASMMTINPEYGKLSARILICHLHE 60
Query: 89 NTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGF 148
T +FSE I + + N +I +IYEI++KN +D I Y +D+D +F
Sbjct: 61 ITFNTFSEKIIYLQKYRN--------IINPEIYEIVVKNREIIDDIIDYTKDYDLTFFSI 112
Query: 149 KTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNA 208
+L +SYL +V +V+ERPQ + MRV++ IH+D+ + +TY +MS +FTHA+PTL+N+
Sbjct: 113 TSLMKSYLFRVNDEVIERPQDIFMRVALQIHRDNWEKVKETYDLMSNHYFTHATPTLYNS 172
Query: 209 GTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGT 268
T R QL+SCFL+ +DSIEGIY+TLK+CAVISK +GGIG+++H+IR GS + T G
Sbjct: 173 CTIRSQLASCFLLSPINDSIEGIYDTLKQCAVISKHSGGIGLNLHSIRCNGSDLVSTGGK 232
Query: 269 SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDL 328
S GI+P+++V N T +Y++QGG +R + A+YLEPWH DIF+FL+L+KN G E+ RARD+
Sbjct: 233 SRGIIPLIQVINSTKKYINQGGNRRSSSMAIYLEPWHKDIFDFLDLRKNTGSEDIRARDI 292
Query: 329 FYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQN 388
F ALW+ DLFMERV N +WSLFCPNEA GL D WG +F KLYT YER K + VV+A+
Sbjct: 293 FTALWINDLFMERVDKNEEWSLFCPNEAKGLDDVWGEDFNKLYTKYER-TKNRTVVKARK 351
Query: 389 LWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLAS 448
LW I+ +QIETGTPYML+KDTCNR SNQQNLG IKSSNLC EIIEY+ E AVCNLAS
Sbjct: 352 LWKAIIEAQIETGTPYMLYKDTCNRLSNQQNLGIIKSSNLCAEIIEYSDKNEIAVCNLAS 411
Query: 449 IALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVE 508
+ L RFVRE FDFE+L+++ ++T NLN ID +YPVE
Sbjct: 412 VCLSRFVREGK--------------------FDFEELSKIVKVITRNLNNCIDSTFYPVE 451
Query: 509 TARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAK 568
+RSN RHRPIGIGVQGLAD F+L+ F+S A+ LN IFETIYY AL+ S E+A +
Sbjct: 452 ECKRSNFRHRPIGIGVQGLADAFVLMRYPFDSQNARDLNFKIFETIYYSALEESVELAKE 511
Query: 569 EGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQ 628
GPYET+ SP+SKGI ++ + W +LR+ I K+GVRNSLLV+PMPTASTSQ
Sbjct: 512 YGPYETFAGSPLSKGIFHFELCKKKVPNLEKWNLLREKIKKHGVRNSLLVSPMPTASTSQ 571
Query: 629 ILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKI 688
I NNECFEP+TSNIY+RR +GEF +VN++LL DL + +WS +KN II +GS+Q I
Sbjct: 572 IFNNNECFEPFTSNIYTRRTHAGEFQIVNQYLLKDLINLNLWSHEMKNLIIEYEGSIQNI 631
Query: 689 PEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWS 748
IP+++K +YKT WE+K ++D+A DR +IDQSQSLN+ + QP + K++S+HF +
Sbjct: 632 KSIPQDIKDLYKTAWELKMKHVIDLAADRQLFIDQSQSLNLFVAQPTYSKLSSMHFYAFK 691
Query: 749 RGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMA 808
GLKTGMYYLR+R AIKFTVD + EK ++D N E C A
Sbjct: 692 SGLKTGMYYLRTRPITSAIKFTVDQKLL----EKTMSSIND------------NDEVCDA 735
Query: 809 CGS 811
C +
Sbjct: 736 CSA 738
>gi|357541940|gb|AET84702.1| ribonucleotide reductase [Ostreococcus lucimarinus virus OlV4]
Length = 607
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/617 (60%), Positives = 477/617 (77%), Gaps = 19/617 (3%)
Query: 156 LLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQL 215
L ++ G ++E PQ+M MRV+IGIH +DIDS ++TY MS+ F HA+PTLFNAGTPRPQ+
Sbjct: 2 LQRLDGVLMETPQYMFMRVAIGIHGEDIDSVLETYDKMSRGMFIHATPTLFNAGTPRPQM 61
Query: 216 SSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPM 275
SSCFL+ K+DSI GIY TL ECA ISK AGGIG+ +H++RA S IRGTNG S+GI+PM
Sbjct: 62 SSCFLIANKEDSINGIYGTLTECAQISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPM 121
Query: 276 LRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVP 335
LRVFN TARYV+Q G +RKG+ AVYLEPWHADI EFL L+ N G EE R RDLF ALW+P
Sbjct: 122 LRVFNATARYVNQAG-RRKGSIAVYLEPWHADIMEFLELRLNQGDEEARCRDLFSALWIP 180
Query: 336 DLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILT 395
DLFM+RV+ +G WSLFCP++A GL+D G EFE LYT YE EG+A V A ++W IL
Sbjct: 181 DLFMKRVEESGNWSLFCPDKAPGLSDAVGEEFEALYTKYEEEGRATATVPAADVWKAILK 240
Query: 396 SQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
SQ ETGTPYML+KD CN+KSNQ+NLG IKSSNLCTEI+E+T ETAVCNLASIALP++V
Sbjct: 241 SQTETGTPYMLYKDACNQKSNQKNLGVIKSSNLCTEILEFTDKDETAVCNLASIALPKYV 300
Query: 456 REKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL 515
S+ + FD+EKL EVT VT+NLN++ID N+YPVETAR+SN+
Sbjct: 301 ------------------DSETKTFDYEKLHEVTKTVTKNLNRVIDRNFYPVETARKSNM 342
Query: 516 RHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETY 575
RHRPIG+GVQGLAD FIL AF+S EA+++N IFET+Y+ AL+ SSE+A +GPYET+
Sbjct: 343 RHRPIGLGVQGLADVFILCRHAFDSDEAKEINARIFETMYHAALEASSELAEVDGPYETF 402
Query: 576 HNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
SP S+G+LQ DMW +DW L++ I + G+RNSLL+APMPTAST+QILGNNEC
Sbjct: 403 EGSPASQGVLQFDMWEGETKLHYDWDALKERIKERGLRNSLLMAPMPTASTAQILGNNEC 462
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
FEPYT+NIY RR L+GEFV+VNKHL+ DL E+G+WS +K+ ++ GS+Q I +IP+E+
Sbjct: 463 FEPYTTNIYLRRTLAGEFVIVNKHLVDDLKEIGLWSKDMKDLMVKAGGSIQNIVDIPDEI 522
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
K +Y+TVWEIK ++DMA DRG +IDQSQS+N+ M+ P K++S+H +W +GLKTGM
Sbjct: 523 KKLYRTVWEIKMKDVIDMAADRGRFIDQSQSMNLFMESPTMSKLSSMHMYSWKKGLKTGM 582
Query: 756 YYLRSRAAADAIKFTVD 772
YYLRS+A A I+F+++
Sbjct: 583 YYLRSKAKARPIQFSLE 599
>gi|254567974|ref|XP_002491097.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|238030894|emb|CAY68817.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|328352376|emb|CCA38775.1| ribonucleoside-diphosphate reductase subunit M1 [Komagataella
pastoris CBS 7435]
Length = 774
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/807 (50%), Positives = 540/807 (66%), Gaps = 49/807 (6%)
Query: 10 QEAVHFDKITARLK----KLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAA 65
+EA+ FD+ ARLK KLS+GL+ + D LV +KV + + + L L +E A
Sbjct: 5 KEAISFDE--ARLKRSLLKLSFGLNLKFVDIALVVEKVSLAIIENLHLQDLLNLTSEILA 62
Query: 66 AMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIM 125
+++T H DY++LAAR+ ++L K SF + + H GL I
Sbjct: 63 SLSTRHYDYSNLAARLLSNHLRKRLGDSFFANCERLAEHGFVDKGL---------LTIAR 113
Query: 126 KNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS 185
N+ LD I +RDFD+DYFG+ TL+ YLLK ++E PQ + MRV++GIH +D+ S
Sbjct: 114 SNSEQLDGSIKPERDFDFDYFGYMTLQSIYLLKKDDLILETPQFLFMRVALGIHGEDLSS 173
Query: 186 AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSA 245
AI+TY +MSQ +F HASPTLF+AGTP P LSSCFL+ ++D + +Y++L + A+IS +A
Sbjct: 174 AIQTYDLMSQGYFIHASPTLFHAGTPTPYLSSCFLMGLQDADVNSVYQSLHKIAMISNAA 233
Query: 246 GGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWH 305
GGIG++VH+I A + + GIVP+++V N+TARYV QG KR AFA+YLEPWH
Sbjct: 234 GGIGINVHDIPAE-------DACNRGIVPLIKVLNETARYVQQGSNKRPSAFAIYLEPWH 286
Query: 306 ADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGA 365
++F+ LNL+KNHGKEE RARDLFYALW+PDLFME+V+ N W LF P A GL D +G
Sbjct: 287 EEVFDLLNLRKNHGKEEIRARDLFYALWIPDLFMEKVEKNEDWCLFNPLHAKGLNDVYGE 346
Query: 366 EFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKS 425
+F LY YE++G + + AQ LW I+ +QIETGTP+ML+KD+CNRKSNQ NLGTI+
Sbjct: 347 QFNLLYAEYEKKGMYVRKIPAQQLWNAIVDAQIETGTPFMLYKDSCNRKSNQSNLGTIQC 406
Query: 426 SNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKL 485
SNLC EI+EY+S + AVCNLASI LP++V + FDFE L
Sbjct: 407 SNLCCEIVEYSSRDQIAVCNLASIGLPKYVVDGK--------------------FDFESL 446
Query: 486 AEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQ 545
IVTENLNK+ID++ YPV A SN RP+ IGVQGL DTF+LL + ++S EA
Sbjct: 447 KNSVRIVTENLNKVIDISKYPVPEASYSNDLTRPMAIGVQGLWDTFMLLKIPYDSEEAAA 506
Query: 546 LNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD-RWDWGVLR 604
LN IFETIYY AL+TS IA K+GPY+++ SP SKG+LQ D+WNV D DW LR
Sbjct: 507 LNSQIFETIYYSALETSMNIAKKDGPYKSFQGSPASKGLLQMDLWNVKEEDLTLDWKSLR 566
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I K+G+RNSLLV PMPTASTSQILG E FEP + N Y+RRV SGE+ VVNK+L+ DL
Sbjct: 567 SDIVKHGLRNSLLVGPMPTASTSQILGFCESFEPLSYNFYTRRVSSGEYQVVNKYLIDDL 626
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
+G+W+ +++ +II +DGS+Q+I EIP+E+K +YKTVWEI Q ++MA DRG +IDQS
Sbjct: 627 INLGLWTDSLRQEIIGNDGSIQEIDEIPQEVKSLYKTVWEISQRITINMAADRGRFIDQS 686
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK----- 779
QS+N+++ +PN K+T++HF W +GLKTGMYYLR++AA+ AIKF++D S K
Sbjct: 687 QSMNLYLAKPNRGKLTAMHFYAWKKGLKTGMYYLRTKAASSAIKFSIDISKRKRDGTYNT 746
Query: 780 PEKPELVVDDETKMAQVVCSLTNREEC 806
P K + V E C L N E C
Sbjct: 747 PTKRQ-AVQSEALETTPSCQLNNCESC 772
>gi|387866126|ref|YP_003358255.2| ribonucleotide reductase subunit 1 [Anguillid herpesvirus 1]
gi|387866034|gb|ADA57879.2| ribonucleotide reductase subunit 1 [Anguillid herpesvirus 1]
Length = 889
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/781 (48%), Positives = 533/781 (68%), Gaps = 14/781 (1%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V K GR E K+ ++L+ LSYGL+T+ D + G+Y G+TT +LD++ A
Sbjct: 6 VRKHSGRTEMWSTKKMLSKLESLSYGLNTDFVDLDRLVTATMDGLYDGITTKELDDVMAR 65
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
TAA T+ H DY+ LA RI V+++HK T +F + + N + P + D++
Sbjct: 66 TAAGFTSYHFDYSLLAGRIVVNSIHKYTVGNFLQGAVLLQNMDETK-----PHVTDELVA 120
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
+ K + I Y RD+ +++F +TLER+YLLKV +V+ERPQH+ MR++IGIH D
Sbjct: 121 VARKYENQIQGAIDYSRDYTFNFFAIRTLERAYLLKVNERVMERPQHLFMRIAIGIHGFD 180
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
++S ++TY +S++ F+HASPTLF+AGT +L+SC+LV + DDSI GIY TL+ECA I+
Sbjct: 181 LESVLETYRCLSEKRFSHASPTLFHAGTNFAKLASCYLVTLADDSIAGIYSTLQECAQIA 240
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K +GGIG ++ N+RA GS I TNGT+NG+VPMLRVFN R VDQGG KR GA AV+LE
Sbjct: 241 KCSGGIGAAISNVRAEGSAINSTNGTANGLVPMLRVFNAMTRMVDQGGNKRPGAMAVWLE 300
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWHADI +L+LKKN G + RARDLFY LW+ DLFMERV+ + WSL CP + GL D
Sbjct: 301 PWHADIAAWLDLKKNLGDDGIRARDLFYGLWISDLFMERVKDDQMWSLMCPKKCPGLMDV 360
Query: 363 WGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGT 422
+G++F LYT YE +G K V+A+ LW IL SQ+E G P+M++KD+CNRKSNQQ++G
Sbjct: 361 YGSDFVALYTKYESQGMYVKQVEARELWTHILRSQMENGMPFMMYKDSCNRKSNQQHVGV 420
Query: 423 IKSSNLCTEIIEYTSPTETAVCNLASIALP---------RFVREKDVPVESHPSRIVGSR 473
+K NLCTEI+E + P AVCNLA++ LP R +V + +
Sbjct: 421 VKCGNLCTEIVEVSEPHRPAVCNLAAVCLPTCVACECGIRQASRTEVASSASSAVQACED 480
Query: 474 GSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
+ + FDF +L +T ++ +NLN++ID + Y + A N + RP+GIGVQGLAD F +
Sbjct: 481 PTCRKSFDFGELGRLTEVLVKNLNRVIDKSDYAFDGANHRNSQDRPLGIGVQGLADVFAM 540
Query: 534 LGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVI 593
LG+AF+ EA +LN IFET+YYHA+ S ++A ++ PY TY SPVS+GI Q DMW V
Sbjct: 541 LGLAFDGTEAARLNVQIFETMYYHAMAASCKLAEEDQPYPTYKGSPVSQGIFQFDMWGVK 600
Query: 594 PSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEF 653
PS DW L+ + K GVRNSLL+APMPTAST+QI GNNE FEP+T+N+++R VLSG+F
Sbjct: 601 PSAMHDWTSLKRRVQKYGVRNSLLLAPMPTASTAQIFGNNEAFEPFTNNLFTRGVLSGDF 660
Query: 654 VVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDM 713
++N HL+ +L +G+W + +++ D+GS++ ++P+ + ++KTVWEI Q T+++M
Sbjct: 661 QIINPHLVRELIRLGMWGEETRMRLMADNGSIRTWEDVPQHTRDVFKTVWEISQKTIINM 720
Query: 714 AVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT 773
A DR +IDQSQSLNIHM PN K++S+H W +GLKTGMYYLRSR A +AI+FTVD
Sbjct: 721 AADRAPFIDQSQSLNIHMADPNVSKLSSMHMYGWQKGLKTGMYYLRSRPAVNAIQFTVDK 780
Query: 774 S 774
+
Sbjct: 781 T 781
>gi|215401394|ref|YP_002332698.1| ribonucleotide reductase large subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|198448894|gb|ACH88684.1| ribonucleotide reductase large subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
Length = 761
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/774 (49%), Positives = 534/774 (68%), Gaps = 33/774 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR E V K+ R+ +L + L+++ P VS KV G+ TT +D A
Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A AAA+T H DY +LA R+ V+N+HK +SF++ ++ ++ H L++D++
Sbjct: 61 ASVAAALTYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQRLHKH---------NLVSDEL 111
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ +K++ ++ I D DY+YFG++TL+ YL+K+ KV ER QHM MR+++GI
Sbjct: 112 LSVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFG 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAIK+Y +S++ +THASPT+F AGT PQ+SSCFL+ M+ DSI GIY TL +CA+
Sbjct: 172 DDIDSAIKSYKFLSRKMYTHASPTMFAAGTLTPQMSSCFLLTMESDSIRGIYNTLNDCAI 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIG++V+++R S I+ TNGT++G++PMLRVFN+ R+VDQGG KRKGA AVY
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH DI + L++++N G E+ +ARDL ALWVPD+FM+RV+ NG WSL CPNE L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLN 350
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +FE Y HYE +G+ ++ + A L I+ Q ETGTPYML+KD CNRKSNQ N
Sbjct: 351 DTYGDDFEYWYKHYEDKGQFREQMPAVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IK SNLC EI++Y +P ETAVCNLASIA+ +++ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------NNDTF 450
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+ L V V +LNKIID N+YP+ETA++SN+RHRPIGIG+QGLAD F++L + + S
Sbjct: 451 DFQLLHTVVKHVVNSLNKIIDRNFYPIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A LNK I ET+Y+ AL+ S E+A+ PY T+ S S+GILQ D+WN +P+ WDW
Sbjct: 511 DAAVLLNKQIAETVYHAALEASYELASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDW 570
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKMNIQKYGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT---LVDMAVDR 717
+ DL ++ +++ +++ I+ + GS+ I +IP+ LK +Y T+WEI + +++MA DR
Sbjct: 631 VDDLIKLNLYTNSMRKTIMANRGSIASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADR 690
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
G +IDQSQS N++M P K+ S+H W RGLKTGMYY R+ AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMANPTLPKMASVHMYGWKRGLKTGMYYFRTLPAANSQQFTV 744
>gi|22549569|ref|NP_689342.1| rr1 gene product [Mamestra configurata NPV-B]
gi|22476748|gb|AAM95154.1| putative ribonucletide reductase large subunit-like protein
[Mamestra configurata NPV-B]
Length = 761
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/774 (49%), Positives = 535/774 (69%), Gaps = 33/774 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR E V K+ R+ +L + L+++ P VS KV G+ TT +D A
Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A AAA+T H DY +LA R+ V+N+HK +SF++ ++ ++ H L++D++
Sbjct: 61 ASVAAALTYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQRLHKH---------NLVSDEL 111
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ +K++ ++ I D DY+YFG++TL+ YL+K+ KV ER QHM MR+++GI
Sbjct: 112 LSVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFG 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAIK+Y +S++ +THASPT+F AG+ PQ+SSCFL+ M+ DSI GIY TL +CA+
Sbjct: 172 DDIDSAIKSYKFLSRKMYTHASPTMFAAGSLTPQMSSCFLLTMESDSIRGIYNTLNDCAM 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIG++V+++R S I+ TNGT++G++PMLRVFN+ R+VDQGG KRKGA AVY
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH DI + L++++N G E+ +ARDL ALWVPD+FM+RV+ NG WSL CPNE L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLN 350
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +FE Y HYE +G+ ++ + A L I+ Q ETGTPYML+KD CNRKSNQ N
Sbjct: 351 DTYGDDFEYWYKHYEDKGQFREQMPAVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IK SNLC EI++Y +P ETAVCNLASIA+ +++ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------NNDTF 450
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+ L V V ++LNKIID N+YP+ETA++SN+RHRPIGIG+QGLAD F++L + + S
Sbjct: 451 DFQLLHTVVKHVVDSLNKIIDRNFYPIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A LNK I ET+Y+ AL+ S E+A+ PY T+ S S+GILQ D+WN +P+ WDW
Sbjct: 511 DAAVLLNKQIAETVYHAALEASYELASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDW 570
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKINIQKYGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT---LVDMAVDR 717
+ DL ++ +++ +++ I+ + GS+ I +IP+ LK +Y T+WEI + +++MA DR
Sbjct: 631 VDDLIKLNLYTNSMRKTIMANRGSIASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADR 690
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
G +IDQSQS N++M P K+ S+H W RGLKTGMYY R+ AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMANPTLPKMASVHMYGWKRGLKTGMYYFRTLPAANSQQFTV 744
>gi|357289663|gb|AET72976.1| ribonucleoside-diphosphate reductase [Phaeocystis globosa virus
12T]
gi|357292461|gb|AET73797.1| ribonucleoside-diphosphate reductase [Phaeocystis globosa virus
14T]
Length = 835
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/855 (49%), Positives = 550/855 (64%), Gaps = 83/855 (9%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR G++E + FDKI R+KK GL+ ++ +S KV + ++T+ +DEL
Sbjct: 1 MHVIKRSGKKEVISFDKILKRIKKTGKGLNLQNVIYASLSMKVIDQLKDDISTTDIDELT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+ A+M + HPDY LA+ I VSNLHKNT SF +T+K +Y+ +++ + K LI DD+
Sbjct: 61 AQQCASMASKHPDYTKLASAITVSNLHKNTDASFYKTVKKLYD-FSDINDNKYKLIHDDV 119
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ K LD I Y+RDF +DYFGFKTLER+YLL++ G +VERPQHM MRVSI IH
Sbjct: 120 MATVEKYQVELDEMIDYNRDFLFDYFGFKTLERAYLLRIDGVIVERPQHMWMRVSICIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+++ +TY MS ++F HA+PTLFNAGTPRPQLSSC+L+ M+DDSIEGI+ T+KECA
Sbjct: 180 SNLEKIKETYDYMSNKYFIHATPTLFNAGTPRPQLSSCYLLSMEDDSIEGIFNTVKECAQ 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK +GGIG+ +HN+R++GS+IRGTNGTSNGI+PML VFN TARYVDQGG KR G+FA+Y
Sbjct: 240 ISKWSGGIGLHIHNVRSSGSHIRGTNGTSNGIIPMLGVFNKTARYVDQGG-KRNGSFAMY 298
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEP H DI EFL L+KNHG EE +ARDLFYA+W D+FMERV N WSLFCP++ GL+
Sbjct: 299 LEPHHPDIEEFLELRKNHGDEESKARDLFYAIWASDVFMERVIGNKIWSLFCPDKCPGLS 358
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC+G ++ LY YE EG+ K + A++LW +IL +Q+ETGTPY+L+KD CN KSNQ+NL
Sbjct: 359 DCYGEDYRTLYMKYESEGRYNKQINARDLWLKILDAQMETGTPYILYKDACNSKSNQKNL 418
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIKSSNLC EI+EY+ ETAVCNLASI L FV E ++ F
Sbjct: 419 GTIKSSNLCCEIVEYSDDKETAVCNLASIGLGMFVNE-------------------DKTF 459
Query: 481 DFEKLAEVTAIVTENLNKIID--------------------------------------- 501
D+ KLA+VT ++ NLN IID
Sbjct: 460 DYVKLADVTKVLVTNLNNIIDVNFYPNKKTSRSNYRHRPVGIGVQGLADTFFKMDIAFTS 519
Query: 502 -----VNYYPVETA-----RRSNLRHRPIGIGVQGLADTFILLGMAF--ESPEAQQ-LNK 548
VN Y ET +SN R G G++ L ++ +F + P+ + +
Sbjct: 520 EEAKTVNKYIFETIYFAALEKSNDISRERGEGMEYLKTEYVAKKWSFTDQEPDCRTYVIS 579
Query: 549 DIFETIYYHALK----TSSEI----AAKEGPYETYHNSPVSKGILQPDMWNVIP-SDRWD 599
D + LK SEI A G Y ++ SP+S G Q D+WN P SDR+D
Sbjct: 580 DETDVKLAAQLKECKPIKSEIDDLNAGLMGAYSSFIGSPISNGQFQFDLWNEKPCSDRYD 639
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I K+G+RNSLL APMPTASTSQILGNNECFEP TSNIYSR+ L+GEF +VNK+
Sbjct: 640 WDTLRAKIVKHGIRNSLLCAPMPTASTSQILGNNECFEPITSNIYSRKTLAGEFTMVNKY 699
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ +L + +W ++KN II + GSVQ I +PE +K YK VWEIK TL+DMA DRG
Sbjct: 700 LVDELLALKLWDESVKNNIIANKGSVQYIDGLPEHIKEKYKIVWEIKMKTLIDMARDRGL 759
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
YI QSQS+N+ M+ P K +T++HF W GLKTG+YYLR + A +FT++ K
Sbjct: 760 YICQSQSMNLWMEDPEPKSLTNMHFYGWRAGLKTGIYYLRRKPKHHAQQFTIEPEK-KGT 818
Query: 780 PEKPELVVDDETKMA 794
EK E DD M
Sbjct: 819 LEKIEEAPDDGCLMC 833
>gi|68304287|ref|YP_249755.1| RR1 [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973116|gb|AAY84082.1| RR1 [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 780
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/791 (49%), Positives = 543/791 (68%), Gaps = 33/791 (4%)
Query: 3 VVKRDGRQE-AVHFDKITARLKKLSYGL--STEHCDPVLVSQKVCAGVYKGVTTSQLDEL 59
++ R+GR+ V+ D I L S L + E+ D ++ K+ G+Y + + +E
Sbjct: 7 MILRNGRESIKVNMDYIKTYLYTRSGDLKKNKEYIDFNYIADKIFCGIYDNIHEDEFEEY 66
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADD 119
+A A+ T H Y+ LA IAV+ LH T+ +S+ ++ ++ K ++ D
Sbjct: 67 SANVCASQTYKHYVYSDLAVVIAVNKLHAKTEDDYSKVVEILW---------KNGILCDS 117
Query: 120 IYEIIMKNAACLDSEIIYDRDFDYDYFGFKTL-ERSYLLKVQGKVVERPQHMLMRVSIGI 178
Y I++K+ +++ I YD D Y YFG TL E YL++V VVERPQHMLMRV++ I
Sbjct: 118 FYSIVIKHLDSINASISYDFDKHYTYFGLMTLIEGKYLMRVDNIVVERPQHMLMRVALQI 177
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
H DDI+SAI++Y +M + FTHASPTLF++G PQ+SSC+L+ +++DSI GIY+TL +C
Sbjct: 178 HGDDIESAIESYRLMRAKLFTHASPTLFSSGMKMPQMSSCYLLNIQEDSINGIYKTLNDC 237
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK GGIG++V IRAT S I TNGT+ G+ P LRVFN R+VDQGG KRKGA
Sbjct: 238 AMISKHGGGIGLNVTQIRATNSKIESTNGTAAGLGPALRVFNSMLRHVDQGG-KRKGAMT 296
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
VY+EPWHAD+F FL+LK+N G E+ +ARDL +A+W PDLFM+RV+T G+WSL CP+E G
Sbjct: 297 VYIEPWHADVFTFLDLKRNMGAEDMKARDLLFAMWTPDLFMKRVKTGGKWSLMCPDECPG 356
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
L DC+G EFE LY +YE EGK KK + A +L +I+ +Q+ETG PYM+FKD N K+NQ+
Sbjct: 357 LNDCYGQEFEDLYENYEAEGKFKKQISALDLHRKIIETQVETGAPYMMFKDHVNNKNNQK 416
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
N G I++SNLC EI++Y+ ETAVCNLASIA+ F + + +
Sbjct: 417 NEGVIRNSNLCAEIVQYSDNRETAVCNLASIAVNNFANK------------------QFK 458
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
FDF+ L V+ +VT NLNKIID+N+YP+ +A+ SN RHRPIGIG+QGLADTF +L M +
Sbjct: 459 SFDFKSLYNVSRVVTNNLNKIIDLNFYPLASAQASNFRHRPIGIGIQGLADTFAILDMPY 518
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS-DR 597
+S EA+ LNK I ETIYY AL S E+A G Y++Y SP S G+LQ D+WN+ S D
Sbjct: 519 DSQEARDLNKKISETIYYGALSQSIELAKLHGTYDSYDGSPASCGLLQFDLWNINQSNDL 578
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W L+ ++ +G+RNSLL+A MPTA+T+QILGNNE FEP+TSN+Y RRVLSGE+ VVN
Sbjct: 579 WNWDELKREMAMHGLRNSLLIAYMPTATTAQILGNNESFEPFTSNLYVRRVLSGEYQVVN 638
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+HL+ L + ++S I KII ++GSVQ I EIP +K ++KT WEIKQ ++DMA +R
Sbjct: 639 QHLVDKLVDTNVYSTDIMIKIIKNNGSVQNIDEIPHNIKALFKTAWEIKQKVVLDMAAER 698
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
G YIDQSQSLN+ + P +K ++S+H +W +GLKTGMYYLR++ AA+ I+FTV +S
Sbjct: 699 GPYIDQSQSLNLFVANPTYKVLSSIHDYSWEKGLKTGMYYLRTKPAANTIQFTVPSSSAI 758
Query: 778 EKPEKPELVVD 788
+ VVD
Sbjct: 759 NRANNEPDVVD 769
>gi|390165363|gb|AFL65010.1| rr1 [Mamestra brassicae MNPV]
Length = 761
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/774 (49%), Positives = 532/774 (68%), Gaps = 33/774 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR E V K+ R+ +L + L+++ P VS KV G+ TT +D A
Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A AA +T H DY +LA R+ V+N+HK +SF++ ++ ++ H L++D++
Sbjct: 61 ASVAATLTYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQRLHKH---------NLVSDEL 111
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ +K++ ++ I D DY+YFG++TL+ YL+K+ KV E QHM MR+++GI
Sbjct: 112 LSVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAETIQHMHMRIALGIFG 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDIDSAIK+Y +S++ +THASPT+F AGT PQ+SSCFL+ M+ DSI GIY TL +CA+
Sbjct: 172 DDIDSAIKSYKFLSRKMYTHASPTMFAAGTLTPQMSSCFLLTMESDSIRGIYNTLNDCAM 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIG++V+++R S I+ TNGT++G++PMLRVFN+ R+VDQGG KRKGA AVY
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH DI + L++++N G E+ +ARDL ALWVPD+FM+RV+ NG WSL CPNE L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLN 350
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G +FE Y HYE +G+ ++ + A L I+ Q ETGTPYML+KD CNRKSNQ N
Sbjct: 351 DTYGDDFEYWYKHYEDKGQFREQMPAVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IK SNLC EI++Y +P ETAVCNLASIA+ +++ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------NNDTF 450
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+ L V V +LNKIID N+YP+ETA++SN+RHRPIGIG+QGLAD F++L + + S
Sbjct: 451 DFQLLHTVVKHVVNSLNKIIDRNFYPIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A LNK I ET+Y+ AL+ S E+A+ PY T+ S S+GILQ D+WN +P+ WDW
Sbjct: 511 DAAVLLNKQIAETVYHAALEASYELASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDW 570
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKINIQKYGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT---LVDMAVDR 717
+ DL ++ +++ +++ I+ + GS+ I +IP+ LK +Y T+WEI + +++MA DR
Sbjct: 631 VDDLIKLNLYTNSMRKTIMANRGSIASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADR 690
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
G +IDQSQS N++M P K+ S+H W RGLKTGMYY R+ AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMANPTLPKMASVHMYGWKRGLKTGMYYFRTLPAANSQQFTV 744
>gi|332022563|gb|EGI62865.1| Ribonucleoside-diphosphate reductase large subunit [Acromyrmex
echinatior]
Length = 748
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/747 (51%), Positives = 519/747 (69%), Gaps = 20/747 (2%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDG +E VHFDKIT R++ L YGL + DP ++ +V + GVTTS+LD LA
Sbjct: 8 MHVLKRDGHKEPVHFDKITGRIEALCYGLDMNYVDPSAIALRVITNLCSGVTTSELDNLA 67
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA M HPDYA+LA+RIA+SNLHK TKK FSE I ++Y + + P+I++
Sbjct: 68 AETAATMINQHPDYATLASRIAISNLHKETKKVFSEVIANLYYAKSSITNEHLPIISEKY 127
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+II NA L+S I+YDRDF+Y Y FK LE +LLK+ GKVVERPQHMLMR+++ IH
Sbjct: 128 YQIIQNNADKLNSAILYDRDFNYSYATFKMLESDHLLKLNGKVVERPQHMLMRIAVAIHG 187
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID I+TY+ MS+++F +A+ T+ A T Q++S FL+ M DSI+GI +TL+ +
Sbjct: 188 EDIDKVIETYNFMSKQYFIYAAQTIDTACTITQQMASTFLLTMSGDSIDGILDTLERFTI 247
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+ G IG +VH IRA + IRGT G SNG+VPML+ + DT+ K +G VY
Sbjct: 248 LCDYNGEIGFNVHCIRAKNTPIRGTGGVSNGLVPMLKTY-DTSIGTVSKNDKNEGPITVY 306
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DIFEFL+LK++ G+E+ RA+ + Y LW P+LFM+RV + WSL CP+E GL
Sbjct: 307 LEPWHSDIFEFLDLKRSIGEEQLRAKGMCYGLWTPNLFMKRVFDDDVWSLMCPHECPGLI 366
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFE LYT YE+EG+ ++ ++A+ LW I+ Q ETG PY++FKD CN KSN Q+L
Sbjct: 367 EAWGDEFETLYTKYEQEGRFRRQIKARELWLLIIQIQCETGVPYIIFKDHCNYKSNHQHL 426
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK S+ TE+++Y+S E A+CN ASIA+ FV S + F
Sbjct: 427 GTIKCSSFSTEVVQYSSSDEVAMCNTASIAVNMFV------------------NSTKKVF 468
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF KL E+ IVT NL+K+IDVN YP+ A+ S +HR IGIGVQGLAD FIL+ FES
Sbjct: 469 DFYKLKEIAKIVTHNLDKMIDVNVYPLPEAKLSCDKHRSIGIGVQGLADAFILMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
EA +LN IFET+YY AL+ S EIA ++GPYE+Y +SP+S+GILQ DMW+V P++ WDW
Sbjct: 529 KEANELNVQIFETLYYGALEASCEIATEKGPYESYKDSPISEGILQFDMWHVKPTNLWDW 588
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L+ I+K+G+RNSLL+A M A +Q+L NN EPY SNIY+ LS ++ ++ HL
Sbjct: 589 DILKAKIAKHGLRNSLLIAQMSDAFMAQMLENNMSIEPYMSNIYTIHALSKQYSIIKPHL 648
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DL E G+W + NKII++ GS+Q I EIPE+LK++YKTVWE+ Q T+ +MA RG +
Sbjct: 649 LRDLIEKGLWDENMCNKIIFNGGSIQNIEEIPEDLKLLYKTVWEMPQKTIFEMAASRGPF 708
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTW 747
IDQSQ LN+HM P +K+TS+HF W
Sbjct: 709 IDQSQCLNVHMIDP-LEKLTSMHFFAW 734
>gi|12002837|gb|AAG43397.1|AF168794_1 ribonucleotide reductase subunit M1 [Xenopus laevis]
Length = 520
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/539 (67%), Positives = 440/539 (81%), Gaps = 19/539 (3%)
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGI 248
TY+++S++WFTHASPTLFNAGT RPQLSSCFL+CMKDDSIEGIY+TLK+CA+ISKSAGGI
Sbjct: 1 TYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCALISKSAGGI 60
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
GV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH D+
Sbjct: 61 GVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHYDV 120
Query: 309 FEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFE 368
F+FL+LKKN GKEE RARDLFYA+W+PDLFM+RV+ N WSL CP+E GL + WG +FE
Sbjct: 121 FDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLEEVWGDKFE 180
Query: 369 KLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNL 428
+LY YEREG+A+KVV+AQ +W+ I+ SQ ETGTPYML+KD CNRKSNQQNLGTIK SNL
Sbjct: 181 ELYEKYEREGRARKVVKAQQVWYAIIESQTETGTPYMLYKDACNRKSNQQNLGTIKCSNL 240
Query: 429 CTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEV 488
CTEI+EYTS E AVCNLAS+AL +V + R FDF+KLA+V
Sbjct: 241 CTEIVEYTSEKEVAVCNLASLALNMYV-------------------TSERSFDFKKLADV 281
Query: 489 TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNK 548
T ++ +NLNKII++N+YPV A SN +HRPIGIGVQGLAD FIL+ F+S +AQ LNK
Sbjct: 282 TKVIVKNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFQSEKAQMLNK 341
Query: 549 DIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMIS 608
IFETIYY AL++S E+A + GPYETY PVSKGILQ DMWNV P+D WDW L++ I+
Sbjct: 342 QIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDWTALKEKIA 401
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL+ DLTE G
Sbjct: 402 KYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLMKDLTEQG 461
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
+W+ +KN+II ++GS+Q +P+IP ELK +YKTVWEI Q T++ MA DRG +IDQSQSL
Sbjct: 462 LWNEEMKNQIIANNGSIQNVPDIPAELKELYKTVWEISQKTVITMAADRGAFIDQSQSL 520
>gi|20070048|ref|NP_613252.1| ribonucleotide reductase large subunit RR1 [Mamestra configurata
NPV-A]
gi|20043442|gb|AAM09277.1| ribonucleotide reductase large subunit RR1 [Mamestra configurata
NPV-A]
gi|33331880|gb|AAQ11188.1| putative ribonucletide reductase large subunit-like protein
[Mamestra configurata NPV-A]
Length = 761
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/774 (49%), Positives = 527/774 (68%), Gaps = 33/774 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGR E V K+ R+ +L + L+++ P VS KV + TT +D A
Sbjct: 1 MYVVKRDGRLEQVSPSKLHNRIHRLCHDLNSQFVHPRAVSLKVIKSLSDHTTTEDIDIYA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A AA +T H DY LA R+ V+N+HK +SF++ ++ ++ H L++D++
Sbjct: 61 ASVAATLTYKHYDYDMLAGRLLVTNMHKYVDESFTKVVQRLHKH---------NLVSDEL 111
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+ +K++ ++ I D DY+YFG++TL+ YL+K+ KV ER QHM MR+++GI
Sbjct: 112 LLVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFG 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDID+AIK+Y +S + +THASPT+F AGTP PQ+SSCFL+ M+ DSI GIY TL +CA+
Sbjct: 172 DDIDNAIKSYKFLSTKMYTHASPTMFAAGTPTPQMSSCFLLTMESDSIRGIYNTLNDCAM 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIG++V+++R S I+ TNGT++G++PMLRVFN+ R+V+QGG KRKGA AVY
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVNQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH DI + L++++N G E+ +ARDL ALWVPD+FM RVQ NG+WSL CPNE L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMRRVQENGRWSLMCPNECPELN 350
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ +G EFE Y HYE +G+ + + A L I+ Q ETGTPYML+KD CNRKSNQ N
Sbjct: 351 NTFGDEFEYWYKHYEDKGQFRDQMPAVTLMRTIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
G IK SNLC EI++Y +P ETAVCNLASIA+ +++ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------INGTF 450
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+ L V V +LNKIID N+YPVE A++SN+RHRPIGIG+QGLAD F++L + + S
Sbjct: 451 DFQLLHSVVKHVVISLNKIIDRNFYPVEAAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
A LNK I ET+Y+ AL S ++A+ PY T+ S S+GILQ D+WN IP+ WDW
Sbjct: 511 DAAVLLNKQISETVYHAALDASLKLASDSEPYSTFAGSKASQGILQYDLWNAIPTSLWDW 570
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKMNIQKHGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT---LVDMAVDR 717
+ DL + +++ +++ +I+ + GS+ I EIP+ +K +Y T+WE ++DMA DR
Sbjct: 631 VDDLIALNLYTSSMRKRIMANRGSIASIDEIPDNIKKLYMTIWECWHNNGKFMIDMAADR 690
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
G +IDQSQS N++M P K+ S+H W RGLKTGMYY R+ AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMADPTLAKMASVHMYGWQRGLKTGMYYFRTLPAANSQQFTV 744
>gi|219118138|ref|XP_002179850.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408903|gb|EEC48836.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 926
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/810 (51%), Positives = 533/810 (65%), Gaps = 103/810 (12%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V KRDGR E + K+ RL LS GL + V +++ + G+Y VTT ++D LA
Sbjct: 67 LHVSKRDGRLELLDSTKLLQRLTDLSDGLDMRFLNLVALTESIVRGMYPNVTTHEIDVLA 126
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA++ T HPDY LAARI ++ HK T FSE I+ +YN SG I +
Sbjct: 127 AETAASLGTQHPDYGRLAARILITQNHKTTPTCFSEAIETLYN-----SG--KGFIDHKV 179
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG--KVVERPQHMLMRVSIGI 178
E++ + +DS I+++RD + YFG+KTLER+YLLK +V+ERPQ+++MRV++GI
Sbjct: 180 GELVRRRGPEIDSRIVHERDLEMTYFGYKTLERAYLLKKDNGNQVLERPQYLMMRVALGI 239
Query: 179 H---------KDD-IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H +DD +++A +TY +MS+ +FTHASPTLF+AGT PQLSSCFLV M +DSI
Sbjct: 240 HCTSKMSSRSEDDCLEAAFETYDLMSRGFFTHASPTLFHAGTTHPQLSSCFLVQMSEDSI 299
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
GIY+TLK CAVISK+AGGIG+SVHNIRA G+ I+GT G SNG+VPMLRVF+ T+RYVDQ
Sbjct: 300 NGIYDTLKRCAVISKAAGGIGLSVHNIRARGTPIQGTRGVSNGLVPMLRVFDVTSRYVDQ 359
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GGGKR GAFA+YLEPWHADIF+ L+LKKNHGKEE RARDLFY LW+PDLFM+RV+ + W
Sbjct: 360 GGGKRPGAFAIYLEPWHADIFDVLSLKKNHGKEEQRARDLFYGLWIPDLFMKRVEEDDVW 419
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SL CP++ GLA C+GA+FE LY HYE+EGK + V+A+ LW IL SQIETGTPYML+K
Sbjct: 420 SLMCPHQCPGLAHCYGAKFEALYQHYEQEGKFVRQVRARELWGAILESQIETGTPYMLYK 479
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
DTCN KSNQQN+GTI+ SNLCTEII+Y+ ETAVCNLASI LPRFV V +
Sbjct: 480 DTCNTKSNQQNIGTIQCSNLCTEIIQYSDQEETAVCNLASICLPRFV------VSERGTF 533
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
S S + FFD E L IVT NLN IIDVN YPV+ A+ SN +HRPIGIGV GLA
Sbjct: 534 GSISPESGSAFFDHEALHRAAKIVTRNLNSIIDVNSYPVDGAKTSNFKHRPIGIGVSGLA 593
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F+ LG+ F S A++LN+ IFETIY+ AL+ S+E+A KEGPYET+ SP S+G LQ +
Sbjct: 594 DAFLRLGLPFTSAAAKKLNEAIFETIYHAALEASAELAEKEGPYETFAGSPASQGKLQFN 653
Query: 589 MWNV----IPSDRW----------------------DWGVLRDMISKNGVRNSLLVAPMP 622
+W + PS ++ DW LR I K G+RNSL A
Sbjct: 654 LWGLSDDETPSHKYALAKETPVPIQMYPNSSNVCGYDWESLRRRIVKTGLRNSLSWASTS 713
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
+S S + T +N+++ D
Sbjct: 714 VSSLS-------------------------------------------AQTFRNQMMRDG 730
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ IP+IP+ LK +YKTVWEIK ++DM DRG +IDQ+ PN K+T++
Sbjct: 731 GSVQNIPDIPDRLKELYKTVWEIKMKDIIDMGADRGKFIDQN---------PNMDKLTAM 781
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
HF W +GLKTGMYYLR++ A +AI++TV+
Sbjct: 782 HFYAWKKGLKTGMYYLRTKPAVNAIQYTVE 811
>gi|74229829|ref|YP_309033.1| ribonucleotide reductase (rr1) [Trichoplusia ni SNPV]
gi|72259743|gb|AAZ67514.1| ribonucleotide reductase (rr1) [Trichoplusia ni SNPV]
Length = 772
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/779 (49%), Positives = 540/779 (69%), Gaps = 32/779 (4%)
Query: 6 RDGRQEAVHFDKITARLKKLSYGLST--EHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
R+G+ V FD I + L S L+ EH D ++ K+ G+Y + + ++ +A
Sbjct: 4 RNGQSAVVDFDSIKSYLYCRSGDLTKNKEHIDFDHIADKIINGIYDNIDQDEFEDYSARV 63
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI 123
A+ T H Y+ LAA IA++ LH T+ +S+ + ++ R+G+ + D Y I
Sbjct: 64 CASQTYKHYVYSDLAAMIAINKLHAKTEDDYSKVVDILW-----RNGV----LCDSFYWI 114
Query: 124 IMKNAACLDSEIIYDRDFDYDYFGFKTL-ERSYLLKVQGKVVERPQHMLMRVSIGIHKDD 182
+KNA +++ I YD D Y YFG T+ E YL++V VERPQHMLMRV++ IH +D
Sbjct: 115 AVKNANVINAAISYDFDKQYTYFGLMTMIEGGYLMRVNNVTVERPQHMLMRVALQIHGED 174
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
I+SAI++Y +M + FTHASPTLF++G PQ+SSC+L+ +++DSI GIY+TL +CA+IS
Sbjct: 175 IESAIESYRLMRSKLFTHASPTLFSSGMKMPQMSSCYLLNIQEDSINGIYKTLNDCAMIS 234
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K GGIG++V IRA S I+ TNGT+ G+ P LRVFN R+VDQGG KRKGA AVY+E
Sbjct: 235 KHGGGIGLNVSQIRAANSKIKSTNGTAAGLGPALRVFNSMLRHVDQGG-KRKGALAVYIE 293
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
PWHADIF FL+LK+N G E+ +ARDLF+A+W P LFM+RV +WSL CP+E GL DC
Sbjct: 294 PWHADIFTFLDLKRNMGAEDMKARDLFFAMWTPSLFMKRVSAGEKWSLMCPDECPGLNDC 353
Query: 363 WGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGT 422
+G EFE+LY YE +GK K+ + A +L +I+ Q+ETG PYML KD N K+NQ+NLG
Sbjct: 354 YGEEFERLYESYETQGKFKEQILALDLHRKIIEIQVETGGPYMLHKDNVNEKNNQKNLGV 413
Query: 423 IKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDF 482
I++SNLC EI++Y+ ETAVCNLASIA+ F ++ +KN FDF
Sbjct: 414 IRNSNLCAEIVQYSDNKETAVCNLASIAVNCFANKR----------------TKN--FDF 455
Query: 483 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPE 542
E L +V +VT NLNKIID N+YP+ +A+ SN +HRPIGIG+QGLAD F +L + ++S +
Sbjct: 456 ESLYKVARVVTNNLNKIIDKNFYPLTSAQVSNFKHRPIGIGIQGLADAFAILNLPYDSQQ 515
Query: 543 AQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS-DRWDWG 601
A++LN+ I ETIYY AL S E+A G Y++Y+ SP S G LQ D+WN+ S D W+W
Sbjct: 516 ARELNRKISETIYYGALSQSIELAKLHGAYDSYNGSPASSGHLQFDLWNISQSNDLWNWD 575
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ ++ +G+RNSLL+A MPTA+T+QILGNNE FEP+TSN+Y RRVLSGE+ +VN+HL+
Sbjct: 576 ELKRQMAIHGLRNSLLIAYMPTATTAQILGNNESFEPFTSNLYVRRVLSGEYQIVNQHLV 635
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
L + ++S + KII ++GSVQ I +IP ++K ++KT WEIKQ L++MA DRG YI
Sbjct: 636 DKLVDCNVYSTELMMKIIKNNGSVQNIDDIPHDVKALFKTAWEIKQKVLLNMAADRGPYI 695
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
DQSQSLN+ + P++K ++S+H +W +GLKTGMYYLR++ AA+ I+FTV +S KP
Sbjct: 696 DQSQSLNLFVANPSYKILSSIHNYSWEKGLKTGMYYLRTKPAANTIQFTVPSSSPFTKP 754
>gi|432101770|gb|ELK29759.1| Ribonucleoside-diphosphate reductase large subunit [Myotis davidii]
Length = 642
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/631 (60%), Positives = 464/631 (73%), Gaps = 56/631 (8%)
Query: 218 CFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLR
Sbjct: 31 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 90
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDL
Sbjct: 91 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 150
Query: 338 FMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQ 397
FM+RV+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ
Sbjct: 151 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQ 210
Query: 398 IETGTPYMLFKDTCN---RKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRF 454
ETGTPYML+KD+C TIK SNLCTEI+EYTS E AVCNLAS+AL +
Sbjct: 211 TETGTPYMLYKDSCTVXXXXXXXXXXXTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMY 270
Query: 455 VREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSN 514
V + +DF+KLAEVT +V NLNKIID+NYYP+ R+N
Sbjct: 271 V-------------------TTEHTYDFKKLAEVTKVVVRNLNKIIDINYYPIPEPIRAN 311
Query: 515 L----------------------------------RHRPIGIGVQGLADTFILLGMAFES 540
+ RHRPIGIGVQGLAD FIL+ FES
Sbjct: 312 MCKLTQPRWRLICVYRLGVKTEDNIEGSEAYLSNKRHRPIGIGVQGLADAFILMRYPFES 371
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 372 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 431
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 432 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 491
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T+++MA +RG +
Sbjct: 492 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTILNMAAERGAF 551
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 552 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 611
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 612 KASKEEEEKERNTAAMVCSLENRDECLMCGS 642
>gi|145527768|ref|XP_001449684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417272|emb|CAK82287.1| unnamed protein product [Paramecium tetraurelia]
Length = 621
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/612 (60%), Positives = 461/612 (75%), Gaps = 29/612 (4%)
Query: 193 MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSV 252
MSQ++FTHA+PTLFN+GTP PQ+SSCFL+ M DDSIEGIYETLK CA+ISKSAGGIG+SV
Sbjct: 1 MSQKYFTHATPTLFNSGTPYPQMSSCFLLDMVDDSIEGIYETLKRCALISKSAGGIGLSV 60
Query: 253 HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFL 312
IR+ SYIRGTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+YLEPWH+DI FL
Sbjct: 61 SKIRSQDSYIRGTNGISNGLVPMLKVFNDTARYVDQGGGKRKGSFAIYLEPWHSDIISFL 120
Query: 313 NLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYT 372
L+KNHG EE RARDLF LW+PDLFM+RV+ + W+L CPNE GL DC+G EF KLYT
Sbjct: 121 QLRKNHGIEEQRARDLFLGLWIPDLFMQRVKDDSDWTLMCPNECPGLQDCYGQEFNKLYT 180
Query: 373 HYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEI 432
YE + + ++A+ LW EI+ +QI TG PYML+KD CN KSNQ+NLGTIKSSNLCTEI
Sbjct: 181 DYESKNMGRVTMKARQLWQEIIDAQISTGLPYMLYKDACNSKSNQKNLGTIKSSNLCTEI 240
Query: 433 IEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIV 492
I+YTSP E AVCNLASI L + ++E ++ F+F+KL E+T I+
Sbjct: 241 IQYTSPDEVAVCNLASINLQKLIKE-------------------DKTFNFDKLLEITKII 281
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFE 552
T NLN +ID+N+YPV+ A SN R+RPIGIGVQG AD + + F+S +A +LN IFE
Sbjct: 282 TTNLNIVIDLNFYPVQQAEYSNKRNRPIGIGVQGFADALQRMKIPFDSEDALELNAKIFE 341
Query: 553 TIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGV 612
TIYY A + S E+A + GPYET+ SP S+GILQ DMW V P +DW L+ I K G+
Sbjct: 342 TIYYGACERSLELAQQLGPYETFAGSPASQGILQFDMWGVSPK-LYDWNTLKQNIVKYGM 400
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSP 672
RNSLL+APMPTASTSQIL NNE FEPYT+NIY+RRVL+GEFV +N HL+ DL E+ +W+P
Sbjct: 401 RNSLLIAPMPTASTSQILQNNESFEPYTTNIYTRRVLAGEFVCINPHLVDDLIELNLWTP 460
Query: 673 TIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMD 732
IKNK+I ++GSVQ I EIP +K +YKTVWEI Q ++++A R +IDQSQSLNIHM
Sbjct: 461 QIKNKLIMNNGSVQNIDEIPTNIKQLYKTVWEISQKAILNLATSRAPFIDQSQSLNIHMA 520
Query: 733 QPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDT-SVFKE------KPEKPEL 785
+P KVTS+HF W +GLKTGMYYLR+R AAD IKFTVD ++ KE + K EL
Sbjct: 521 EPTMSKVTSMHFYAWEKGLKTGMYYLRTRPAADPIKFTVDVEALLKEGGQIKIQQSKQEL 580
Query: 786 VVDDETKMAQVV 797
+ DE+ ++V
Sbjct: 581 I--DESASKKIV 590
>gi|384498832|gb|EIE89323.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhizopus
delemar RA 99-880]
Length = 745
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/769 (50%), Positives = 514/769 (66%), Gaps = 32/769 (4%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYN-HY 105
+Y G+TT QLDELAAE A HPD+ LAAR+++SNL K T ++FS +K +YN +
Sbjct: 1 MYPGITTVQLDELAAEIAVDAAVVHPDFVILAARLSISNLQKETHENFSNVVKALYNDNT 60
Query: 106 NERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
+ ++G P++ + +++ ++A ++S I Y RDF +DYFGFK LE++ LLK+ K VE
Sbjct: 61 HPKTGAANPIVTKEFVKLVDEHAEKINSVIDYKRDFYFDYFGFKNLEKNLLLKIGNKTVE 120
Query: 166 RPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
RPQHM MRV++ IH D++SA KTY +S+ +THA+ TL NAGT QLSS F V MKD
Sbjct: 121 RPQHMFMRVALTIHGQDLESAFKTYDYLSRHLYTHATTTLINAGTVCGQLSSFFEVQMKD 180
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSIEGIY+T+ CA I+K G +G+S IRA+GSYI GTNGTSNGI+PMLRVFND AR+
Sbjct: 181 DSIEGIYDTVTNCARIAKVFGSVGMSFQKIRASGSYIAGTNGTSNGIIPMLRVFNDAARF 240
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
+ G K KG FAVY+EPWHADIFEF+ L + +G+E RAR L LW+PDLFM+RV+ N
Sbjct: 241 ITPGSRKVKGTFAVYVEPWHADIFEFIELSRQNGEENLRARHLLLGLWIPDLFMKRVEEN 300
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYM 405
G WSL CPNE GL +G FE+LY YE+ GKA+K V AQ LWF IL +QIE+G P+M
Sbjct: 301 GDWSLMCPNECPGLDVSYGEAFEELYIRYEKAGKARKTVSAQKLWFSILDTQIESGMPFM 360
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
+KD NRKSNQ+NLG I S ++Y E CN+ASIAL + V
Sbjct: 361 CYKDAANRKSNQKNLGVITGSTFYANTMQYADAEEIGSCNVASIALSKCV---------- 410
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
+ R F+FE LA++ IV +NL+K+IDVN Y E + S L+HR + +GVQ
Sbjct: 411 --------DTNTRSFNFEVLADIVKIVVKNLDKMIDVNNYVSEETKNSALKHRGLSLGVQ 462
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
GLAD F+++ F+S EA+QLNKDIFE IY+ AL+ S+E+A GPY +Y SP+S+GIL
Sbjct: 463 GLADVFLMMRYPFDSDEARQLNKDIFEHIYFAALEASNELAQASGPYPSYEGSPISQGIL 522
Query: 586 QPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 645
Q D+WNV SD W LR I +GVRNSLLVAPMPT +TS LGN++ EPY S +Y+
Sbjct: 523 QHDLWNVKGSDCLKWDDLRAKIKAHGVRNSLLVAPMPTTATSVCLGNSDGIEPYKSMLYT 582
Query: 646 RRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEI 705
R S + V+N HL+ DL E GIWSP IK+ ++ D+GS+Q I IP++LK +YKT WEI
Sbjct: 583 RPAHSRDRHVINPHLVGDLIERGIWSPKIKDMLLKDNGSIQNIAIIPDDLKKLYKTAWEI 642
Query: 706 KQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAAD 765
Q ++D+A DR +IDQSQSLN+ +PN+ +++S+HF W +GLKTGM YLR+
Sbjct: 643 PQRVIIDLAADRAPFIDQSQSLNLFSAEPNYGRLSSMHFYAWKKGLKTGMQYLRTNPH-- 700
Query: 766 AIKFTVDTSVFKEKPEKPELVVDDETK-----MAQVVCSLTNREECMAC 809
+ V E ++ VD E + +A + CSL N E C++C
Sbjct: 701 ------ELVVINENEKETAENVDQEVEKTANNLAAMSCSLDNPESCVSC 743
>gi|429963199|gb|ELA42743.1| ribonucleoside-diphosphate reductase, alpha subunit [Vittaforma
corneae ATCC 50505]
Length = 771
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/741 (50%), Positives = 512/741 (69%), Gaps = 29/741 (3%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK 91
EH D K+ G + T +L + +E AAA+ T H DYA LAA I + T
Sbjct: 24 EHIDVADFLDKISLGTTPEMGTEELAKFCSEAAAALFTTHSDYAKLAAAILTTFHQSITL 83
Query: 92 KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTL 151
+SFSE IK + + L+ +IYE+I++NA DS I Y RDF+ YF +L
Sbjct: 84 ESFSEKIKLIKQN--------TSLLNLEIYELIIQNAPVYDSMIDYSRDFNLSYFSVHSL 135
Query: 152 ERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTP 211
RSY++K+ + +ERPQ + MR +I IH++D +TY ++S +FTHA+PTLFN+
Sbjct: 136 LRSYMIKINRRPIERPQDVFMRAAIQIHRNDFYRVKQTYDLISMGYFTHATPTLFNSCLK 195
Query: 212 RPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNG 271
QL+SCFL+ K+DS+EGIY T+K+CA+ISK +GG+G+S+HNIR GS ++ T G S G
Sbjct: 196 TCQLASCFLISPKEDSLEGIYNTIKDCAIISKYSGGLGLSLHNIRCKGSPLKSTGGYSKG 255
Query: 272 IVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYA 331
+VP++++ N+T +YV+ GG KR+ A YLEPWH D+F++L+++KN G EE RARD+F A
Sbjct: 256 VVPVIKIINETMKYVNLGGIKRQSTIAFYLEPWHMDVFDYLDVRKNSGNEEMRARDIFIA 315
Query: 332 LWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWF 391
+W+ DLFMERV+ + +WSLF PNEA GL D WG EF+KLY YE+ ++ V+ AQ L+
Sbjct: 316 MWINDLFMERVENDEEWSLFDPNEAKGLYDVWGDEFKKLYLKYEKT-LSRVVIPAQKLFK 374
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
I+ SQIETGTPYM++KDTCNR SNQQNLGTI+SSNLC EIIEY++ E AVCNLAS+ L
Sbjct: 375 AIINSQIETGTPYMVYKDTCNRYSNQQNLGTIRSSNLCAEIIEYSASDEIAVCNLASVCL 434
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
P FV KN FDF L EV NLN++ID N+YPV
Sbjct: 435 PAFV--------------------KNGVFDFNALREVVKAALVNLNRVIDNNFYPVPETS 474
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
RSNL+HRP+GIG+QGLADTF L FES +A++LNK I ET+Y+ A+++S+E+A +EGP
Sbjct: 475 RSNLKHRPVGIGIQGLADTFSKLRYPFESQQARELNKLIAETMYFAAIESSAELAMQEGP 534
Query: 572 YETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILG 631
Y ++ SP+SKGI +M+ PS W+W LR + + GVRNSL +A MPTA TSQ+ G
Sbjct: 535 YSSFVGSPLSKGIFHFEMYGAQPSGMWNWEELRAKVLQYGVRNSLFIALMPTAGTSQLFG 594
Query: 632 NNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEI 691
N+ECFEPYTSNI++RR ++GEF VVN +L+ DL +G+W+ +KN II +GS+Q IP I
Sbjct: 595 NSECFEPYTSNIFTRRTVAGEFQVVNTYLMEDLERLGMWNEEMKNIIIEHEGSIQSIPCI 654
Query: 692 PEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGL 751
P+E+K +YKTVWEIK +++D+A DR ++DQS S+NI + QP F +++S+HF W R +
Sbjct: 655 PQEIKNLYKTVWEIKMKSVIDLAADRQPFVDQSMSMNIFLAQPTFAQLSSMHFYGWRRKI 714
Query: 752 KTGMYYLRSRAAADAIKFTVD 772
KTGMYYLR++ + IKFTV+
Sbjct: 715 KTGMYYLRTKPILNPIKFTVN 735
>gi|269105097|ref|ZP_06157792.1| ribonucleotide reductase of class Ia (aerobic) alpha subunit
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268160732|gb|EEZ39230.1| ribonucleotide reductase of class Ia (aerobic) alpha subunit
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 647
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/668 (54%), Positives = 483/668 (72%), Gaps = 33/668 (4%)
Query: 25 LSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVS 84
L+ GL E P+ V+Q+V +G+Y G+ +++D AETAA++ T HPDYA LAAR+ VS
Sbjct: 2 LADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFLAETAASLATEHPDYAKLAARVMVS 58
Query: 85 NLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYD 144
+L K T + T R + +++ + + KN L+ I Y RD+ +D
Sbjct: 59 SLQKETSGYATAT----------RELSEIGILSSAYVDFVAKNQFALEDMIDYKRDYQFD 108
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPT 204
YFG+KTLERSYLLKV+G VVERPQ M MRV++ + DD++ + Y ++S ++THA+PT
Sbjct: 109 YFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAGDDLEEIRELYDLLSLCYYTHATPT 168
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFNAG QLSSCFL+ M++DSI GIY+TLK+CA+ISKSAGGIG+ +HNIRATG+ I G
Sbjct: 169 LFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCALISKSAGGIGLHIHNIRATGAPIIG 228
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVYLEPWHADI FL+L+KNHGKEE R
Sbjct: 229 TNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVYLEPWHADIESFLDLRKNHGKEEFR 288
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
ARDLF ALWVPDLFMERV+T+ +W+LF P+ GL+D +GAEF + Y YER G K +
Sbjct: 289 ARDLFLALWVPDLFMERVETDAEWTLFSPHNTKGLSDLYGAEFTQKYQEYERMGLGVKTI 348
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVC 444
+A+ L +I+ SQ ETGTPYML+KD CN KSNQ+NLGTIKSSNLC EI+E ++P ETA C
Sbjct: 349 KARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNLGTIKSSNLCAEIMEVSTPDETAAC 408
Query: 445 NLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNY 504
NLAS+ALP+FV N FDF+KL +VT + +NL+++IDVNY
Sbjct: 409 NLASLALPKFV--------------------TNTGFDFDKLHQVTKVAIKNLDRVIDVNY 448
Query: 505 YPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSE 564
+P + +SN HRP+G+G+QGLAD F + + F+S EA LN+DI ET+Y+ +L+ S E
Sbjct: 449 HPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDSEEALLLNRDIAETMYHASLEASCE 508
Query: 565 IAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTA 624
IA ++G Y +Y SP+S G Q D+W PS RWDW L+ I+++GVRNSLL+A MPTA
Sbjct: 509 IAKQKGTYSSYDGSPISHGQFQFDLWCEQPSSRWDWSQLKHQIAEHGVRNSLLIAQMPTA 568
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGS 684
ST+QILGNNE FE TSNIY R+ LSGEF+++NK+L+ DL + G+W+ I++ II ++GS
Sbjct: 569 STAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKYLVSDLEQRGLWTSKIRDAIILNNGS 628
Query: 685 VQKIPEIP 692
VQ I IP
Sbjct: 629 VQGIDAIP 636
>gi|448931980|gb|AGE55540.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus MN0810.1]
Length = 763
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/782 (49%), Positives = 517/782 (66%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M VVKRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVVKRDGSSEAVSFDKIMTRIGRLCWAENAKPSHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M T HPDY LAARIAVSNLHK T S ET M
Sbjct: 67 NITTVQLDDLTADKAASMVTTHPDYGILAARIAVSNLHKQTSDSVLETYAKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ N S + YDRD+D+DYFGF T++R YL KV GKV ERPQH
Sbjct: 119 ---SSMLSDEFLQVVRNNEQAFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVTERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + +DI +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHMSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+T+ QWS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAQWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E+LYT YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEELYTKYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYTS E AVC + SI L +V
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDEAAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + AR SNLR RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEARTSNLRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L + F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRLPFDSDAARNLNREIFENIYFAAVEASCELADEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WN P DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WNSEPVTSLDWKGLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELK +YKT WE+ T
Sbjct: 633 AGEFPVVNSYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAVYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P+ K +TS+ F W +GLKT YYLRS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKTMTSMLFYAWKKGLKTLQYYLRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|215401540|ref|YP_002332844.1| RR1 [Spodoptera litura nucleopolyhedrovirus II]
gi|209484081|gb|ACI47514.1| RR1 [Spodoptera litura nucleopolyhedrovirus II]
Length = 904
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/800 (48%), Positives = 533/800 (66%), Gaps = 52/800 (6%)
Query: 15 FDKITARLKKLS-YGLSTEHCDPVLVSQKVCAGVYK-GVTTSQLDELAAETAAAMTTNHP 72
D +T L LS + T + D + QK+ + + GV+ Q+ A+ AA+MT H
Sbjct: 150 LDNLTILLNNLSGKDIDTRYVDVPKLMQKIKESINENGVSFEQMKLYCADVAASMTYIHY 209
Query: 73 DYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLD 132
DYA LA RI V +LH F E + + +++ + +++K+ A L+
Sbjct: 210 DYALLAGRILVEDLHNKVCPCFVEVTNYL---------AQNNVVSHEFNNLVVKHGALLN 260
Query: 133 SEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHM 192
EI ++RD+DY YFGFKTL YLLKV + ERPQHMLMRV++ IH DD+ SAI+TY +
Sbjct: 261 REIKHNRDYDYKYFGFKTLTNGYLLKVNDVIAERPQHMLMRVALAIHGDDVMSAIETYQL 320
Query: 193 MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSV 252
MS FTHASPTLF AGT RPQ+ SCFL C+K+DSI+GIY+TL E A+IS GG+G+SV
Sbjct: 321 MSLGTFTHASPTLFAAGTCRPQMCSCFLQCIKEDSIDGIYKTLHESALISNLGGGLGLSV 380
Query: 253 HNIRATGSYIRGTNGT--SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFE 310
++ A NGT S G+V MLRVFN+ R+VDQGG KRKGA A Y+EPWH +I++
Sbjct: 381 QSVSAQ------YNGTTKSGGLVSMLRVFNNMVRHVDQGG-KRKGALAAYVEPWHPEIYD 433
Query: 311 FLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKL 370
LNL++N G E+ +ARDL LW+PDLFMERV+ N +WSLFCP + GL D +G+ FE L
Sbjct: 434 VLNLRRNMGSEDAKARDLMLGLWIPDLFMERVKENKEWSLFCPKKYPGLLDEYGSSFEIL 493
Query: 371 YTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCT 430
Y YE+ ++ V+A++L+ I+ + +ETG PYML+KD CN+ SNQ+NLG IK SNLC
Sbjct: 494 YEKYEKNKLYERQVKARDLFRFIVETNVETGGPYMLYKDPCNKFSNQKNLGIIKCSNLCA 553
Query: 431 EIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTA 490
EI++Y ETAVCNLASIA+ + V K + FD+ L +T
Sbjct: 554 EIVQYCDKDETAVCNLASIAVNKCV------------------NVKTKTFDYVLLNRLTK 595
Query: 491 IVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDI 550
IV NLNKIID N+YP A SN +HRP+G+G+QGLAD F+LL + ++S EA+ +N I
Sbjct: 596 IVVRNLNKIIDSNHYPTAGAANSNKKHRPVGVGIQGLADAFVLLDIPYDSEEARSVNYMI 655
Query: 551 FETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-WDWGVLRDMISK 609
ETIY+ AL+ S E+A +GPYE+Y NSP+ +G + D +N+ P+D W+W LR+ I +
Sbjct: 656 AETIYFSALEASCELAKIDGPYESYENSPLFRGTMHYDNYNIYPTDHLWNWSKLREKIQR 715
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGI 669
+GVRNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L+ L ++ I
Sbjct: 716 HGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLIKALVDLNI 775
Query: 670 WSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNI 729
++P ++NKI+ ++GSVQ I EIP+ +K ++KT WEIK ++DMA DR +IDQSQSLN+
Sbjct: 776 YTPELRNKILAENGSVQNIDEIPQHVKDLFKTAWEIKSKCMIDMAADRAPFIDQSQSLNL 835
Query: 730 HMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDD 789
+ +P + ++S+HF TW + LKTGMYYLR++ AA A +FTVD +K ++ DD
Sbjct: 836 FVAEPTYSVMSSIHFYTWQKQLKTGMYYLRTKPAAQATQFTVDAEAAASCGKKRKM--DD 893
Query: 790 ETKMAQVVCSLTNREECMAC 809
+ EECM+C
Sbjct: 894 D-----------GTEECMSC 902
>gi|300707604|ref|XP_002996003.1| hypothetical protein NCER_100976 [Nosema ceranae BRL01]
gi|239605258|gb|EEQ82332.1| hypothetical protein NCER_100976 [Nosema ceranae BRL01]
Length = 800
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/743 (48%), Positives = 507/743 (68%), Gaps = 30/743 (4%)
Query: 42 KVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDM 101
K+ +G+ +T + AAETA +MTT H DY +A+I + L +NT SF + +
Sbjct: 66 KIESGLCDDITVEEFISFAAETADSMTTKHYDYGRFSAKILMEYLKENTLDSFFAKVDYI 125
Query: 102 YNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG 161
Y + ++ Y I++ N LD + Y +D + YF TL+R+YLL + G
Sbjct: 126 YKN--------GDFYSEKFYNIVLDNKKFLDELVDYSKDDSWTYFAILTLKRAYLLTLDG 177
Query: 162 KVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV 221
+ +ERPQ ML+RV++ +H D++++ +TY ++S +TH SPT+FN+G+ + QL+SCFL+
Sbjct: 178 QTIERPQDMLLRVAVQLHGDNLENVKETYELLSNNMYTHGSPTIFNSGSKKSQLASCFLL 237
Query: 222 CMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFND 281
++++EG++ET+K C ISKS GG+ + +H++ A G+ IR T G S GI+P ++V N
Sbjct: 238 TPIEETVEGLFETVKRCVQISKSGGGVALDLHDMAAKGTSIRKTGGISKGIIPYIQVLNW 297
Query: 282 TARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMER 341
+ +Y+ Q G +R G A+YLEPWH DIF+FL+L+K+ GK+E RARD+F +W+ DLFM+R
Sbjct: 298 SLKYIGQAGSRRSGCPAIYLEPWHKDIFDFLDLRKSIGKDELRARDVFTGMWINDLFMKR 357
Query: 342 VQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETG 401
V+ N WSLFCP GL++ +G EFE +Y YE++ VV AQ +W I+ SQIETG
Sbjct: 358 VEANEDWSLFCPKSVPGLSNAYGKEFEDMYLEYEKKVDCV-VVPAQKVWKAIIESQIETG 416
Query: 402 TPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVP 461
TPYML+KDT N SNQ+N+GTI+ SNLCTEI++YTSP E AVCNLASI LP+FV
Sbjct: 417 TPYMLYKDTINNLSNQKNIGTIRCSNLCTEIVQYTSPDEVAVCNLASICLPKFVI----- 471
Query: 462 VESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIG 521
N FDF V IVT+N N +ID N+YP++ A +SN +HRPIG
Sbjct: 472 ---------------NGEFDFNLFKSVVKIVTKNANIVIDCNFYPLKEAEKSNKKHRPIG 516
Query: 522 IGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVS 581
+GVQGLAD F++L + +ES A++LNK+IFET+Y+ AL++S E A K GPYE+Y+ SP+S
Sbjct: 517 LGVQGLADVFLMLRLPYESEGARKLNKEIFETLYFGALESSCEEAEKYGPYESYNGSPIS 576
Query: 582 KGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
KGI +M N + RW+W LR I K GVRNSLL+APMPTA TSQI NNE FEP+TS
Sbjct: 577 KGIFHWEMANSSTTGRWNWEELRKKILKYGVRNSLLIAPMPTAGTSQIFNNNEAFEPFTS 636
Query: 642 NIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKT 701
NIY+RR GEF +VN++L++DL ++ +WSP IKN I+ +GS+Q I IPEE+K +YKT
Sbjct: 637 NIYTRRTACGEFQMVNRYLMNDLIKLNMWSPEIKNYIVEQEGSIQNISGIPEEIKELYKT 696
Query: 702 VWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSR 761
VWEIK ++D+A DR ++DQ+QSLN+ + +P + ++S+HF W RGLKTGMYYLR+R
Sbjct: 697 VWEIKMKCVIDLAADRQAFVDQTQSLNLFVAKPTYPILSSMHFYGWKRGLKTGMYYLRTR 756
Query: 762 AAADAIKFTVDTSVFKEKPEKPE 784
AIKFTVD + K K EK E
Sbjct: 757 PITSAIKFTVDLDMLK-KVEKNE 778
>gi|17158276|ref|NP_477694.1| wsv172 [Shrimp white spot syndrome virus]
gi|6165659|gb|AAF04636.1|AF099142_4 large subunit of ribonucleotide reductase [shrimp white spot
syndrome virus]
gi|15021484|gb|AAK77761.1|AF369029_92 ORF92, putative ribonucleotide reductase large subunit (RR1)
[shrimp white spot syndrome virus]
gi|17016570|gb|AAL33176.1| wsv172 [shrimp white spot syndrome virus]
gi|19481820|gb|AAL89096.1| WSSV228 [shrimp white spot syndrome virus]
gi|417072401|gb|AFX59550.1| wsv172 [White spot syndrome virus]
Length = 848
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/858 (45%), Positives = 552/858 (64%), Gaps = 66/858 (7%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSY-------GLSTEHCDPVLVSQKVCAGVYKGVTTS 54
++ KR+G ++ + +KI R++ L +P ++ + + ++
Sbjct: 9 FISKRNGTKQEISLEKIIKRIENACLPVNQYVPKLDKNAINPQELASHIMDRLPATISFQ 68
Query: 55 QLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK--SFSETIKDMYNHYNERSGLK 112
++D+ A+ A +HPD+ LA R SN+HKNTK+ SFS T + + + + +G
Sbjct: 69 EMDDFLADYAKTKIVDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHPGTGKP 128
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK-------VVE 165
A ++ D YE +M NA LD+ I Y D+ + FG +TLE SYL+K+ +VE
Sbjct: 129 ASVVNDTYYENVMANAEILDAVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKKRILVE 188
Query: 166 RPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
RPQ M+MRV++GIH DI S I+TY +MS+ +FTHASPTLFN GT PQLSSCFL+ ++D
Sbjct: 189 RPQDMIMRVAVGIHGSDIKSVIETYDLMSRHYFTHASPTLFNCGTVTPQLSSCFLLGLQD 248
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSIEGIY+TLKE A+ISK+AGG+G+ H++RA GS I +GT G++ L++FN + +
Sbjct: 249 DSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAFLQIFNVSVKK 308
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
V QGG KR+GA A+Y+ WH D+ +F++ +KN G E+ R RDLF A+WV DLFMERV+
Sbjct: 309 VSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLFPAIWVSDLFMERVKAG 368
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYM 405
WSL CP+E GL+D G EF+ LY YE EGK K+VV+A+ L+ +I +++IETGTPY+
Sbjct: 369 KNWSLMCPHECPGLSDVHGEEFKALYEKYEAEGKGKEVVKARALFDQINSARIETGTPYV 428
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
FKDT NRKSNQ+N+G IKSSNLCTEI++Y+ ETAVCNLASIA+ +FV+ +P
Sbjct: 429 CFKDTINRKSNQENVGIIKSSNLCTEIVQYSDSEETAVCNLASIAVNKFVKYSPIP---- 484
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
S + D+ ++ V I+T NL+K+IDVN+Y V+ R SN++ RP+G+GVQ
Sbjct: 485 ---------SLRPYVDYREMKRVVKIMTRNLDKVIDVNFYAVDKTRISNMKTRPMGLGVQ 535
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG-PYETYHNSPVSKGI 584
GLAD F L + FES EA +NK IFETIYY AL+ S EIA ++G YE + SP+SKGI
Sbjct: 536 GLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETYELFEGSPLSKGI 595
Query: 585 LQPDM-----------WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNN 633
Q DM +N +P DW LR I K GV NS+ VAPMPTAST+QILGN+
Sbjct: 596 FQFDMGKENIKNRDIYFNSLPIH--DWEQLRRDIMKYGVHNSMFVAPMPTASTAQILGNS 653
Query: 634 ECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPE 693
E FEP TSN+Y+R VLSG F VVN++++ +L ++G W+ K +I+ GS+Q +P IP+
Sbjct: 654 ESFEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASGGSIQTLPNIPK 713
Query: 694 ELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKT 753
K ++KTVWEI T +DMA+ RG ++DQ+QSLN+ +++P KV S+ W +G+KT
Sbjct: 714 STKELFKTVWEINPRTTLDMAIQRGMFVDQAQSLNLFVEEPELSKVRSMTMYAWEKGIKT 773
Query: 754 GMYYLRSRAAADAIKFTVDTSVFKE-KPEKPE-------------------LVVDDETKM 793
+YYLR++ AA A++FTVD +V +E K E P +VV D
Sbjct: 774 -LYYLRTKGAARAVQFTVDKNVLQEVKKEAPSPVAAFSAPVREEEEEKKSSIVVPDPA-- 830
Query: 794 AQVVCSLTNREECMACGS 811
A ++CS+ N C C S
Sbjct: 831 AALLCSINNPGACEMCSS 848
>gi|448925806|gb|AGE49384.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus Can0610SP]
Length = 763
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/782 (48%), Positives = 516/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARIAVSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQTLVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + +DI +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+ + WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E LY YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L M F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GSVQ++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSVQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P+ K +TS+ F W +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|448926493|gb|AGE50069.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus Canal-1]
Length = 763
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/782 (48%), Positives = 516/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MTVIKRDGSSEAVSFDKIMTRIGRLCWPENAKPSHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI++SNLHK T S S+T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARISISNLHKQTSDSVSDTYARM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +I+ N S + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQIVHDNEHAFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + DI+ +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGGDIEKVKETYDALSRRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLS 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHMSDIRGRGSRIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+T+ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E+LY YE EG+AKK+V+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEELYARYETEGRAKKIVKARDVWNAMIVTQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYTS E AVC + SI L +V
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDEAAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + + +NL++ IDV Y + AR SNLR RPIG+GVQGL D
Sbjct: 460 ------KNGVYDFEDLRKHVKTLAKNLDRSIDVMSYAIPEARTSNLRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L + F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRLPFDSDAARNLNREIFEHIYFAAVEASCELADEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTHLDWKGLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P+ K +TS+ F W +GLKT YYLRS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSLTSMLFYAWKKGLKTLQYYLRSKPAANAIAV 752
Query: 770 TV 771
T+
Sbjct: 753 TI 754
>gi|448936105|gb|AGE59653.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus TN603.4.2]
Length = 763
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/782 (48%), Positives = 514/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARIAVSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSNSVLDTYTKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ + S + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEHEFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + DI +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGQDITKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+T+ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E LY YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L ++
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYI-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + ++ +NL++ IDV Y + A SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKVLAKNLDRSIDVMSYAIPEAMTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L M F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAARNLNREIFEHIYFAAMEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPTMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|448935771|gb|AGE59320.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus OR0704.3]
Length = 763
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/782 (48%), Positives = 516/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARIAVSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRVHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + +DI +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+ + WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E LY YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L M F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P+ K +TS+ F W +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|448932971|gb|AGE56528.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus NE-JV-2]
Length = 763
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/782 (48%), Positives = 516/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARIAVSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + +DI +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+ + WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E LY YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L M F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GSVQ++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSVQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P+ K ++S+ F W +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|125541523|gb|EAY87918.1| hypothetical protein OsI_09340 [Oryza sativa Indica Group]
Length = 676
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/408 (88%), Positives = 382/408 (93%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYVVKRDGRQEAVHFDKITARLK+LSYGLS EHCDPVLV+QKVCAGVYKGVTTSQL ELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKRLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLGELA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAAAMT +HPDYASLAARIA+SNLHK T KSFSETIK MY HY+ERSGL APLIADD+
Sbjct: 61 AETAAAMTASHPDYASLAARIAISNLHKTTMKSFSETIKVMYMHYDERSGLLAPLIADDV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YEIIMKN LDSEIIYDRDFDYDYFGFKTLERSYLLKV GKVVERPQHMLMRVSIGIHK
Sbjct: 121 YEIIMKNTTRLDSEIIYDRDFDYDYFGFKTLERSYLLKVVGKVVERPQHMLMRVSIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI+SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIY+TL ECA
Sbjct: 181 DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAT 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKCAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIFEFL+L+KNHGKEE+RARDLFYALW+PDLFMERVQ N WSLFCPNEA GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQNNENWSLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
DCWG EF+ LY YEREGKAKKVV AQ LWF+IL +QIETGTPYML+K
Sbjct: 361 DCWGDEFQNLYKKYEREGKAKKVVSAQALWFDILKAQIETGTPYMLYK 408
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/277 (80%), Positives = 249/277 (89%), Gaps = 1/277 (0%)
Query: 535 GMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP 594
G + +AQQLNKDIFETIYYHALK S+EIAAKEGPYETY SPVSKGILQPDMWNV+P
Sbjct: 401 GTPYMLYKAQQLNKDIFETIYYHALKASAEIAAKEGPYETYSGSPVSKGILQPDMWNVVP 460
Query: 595 SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
SDRW+W LR+MISK GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV
Sbjct: 461 SDRWNWSDLREMISKVGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 520
Query: 655 VVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMA 714
VVNKHLLHDLTEMGIWSP +KNKI+Y+DGSVQKI EIP++LK IY+TVWEIKQ T+VDMA
Sbjct: 521 VVNKHLLHDLTEMGIWSPVLKNKIVYEDGSVQKISEIPDDLKAIYRTVWEIKQKTIVDMA 580
Query: 715 VDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
+DRGCYIDQSQSLNIHMDQPNF K+TSLHF WS+GLKTGMYYLR+RAAADAIKFTVDT+
Sbjct: 581 IDRGCYIDQSQSLNIHMDQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTT 640
Query: 775 VFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ K+K E D ++KMA+VVCSL NR+EC+ACGS
Sbjct: 641 LLKDKQHNAE-EEDVQSKMAEVVCSLNNRDECLACGS 676
>gi|448932314|gb|AGE55873.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus MO0605SPH]
gi|448936443|gb|AGE59990.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus WI0606]
Length = 763
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/782 (48%), Positives = 516/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARIAVSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + +D +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDTAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+ + WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E LY YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+T+NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILTKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L M F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P+ K ++S+ F W +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|14581686|gb|AAK69359.1|AF132669_1 ribonucleotide reductase large subunit RR1 [shrimp white spot
syndrome virus]
Length = 848
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/858 (45%), Positives = 551/858 (64%), Gaps = 66/858 (7%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSY-------GLSTEHCDPVLVSQKVCAGVYKGVTTS 54
++ KR+G ++ + +KI R++ L +P ++ + + ++
Sbjct: 9 FISKRNGTKQEISLEKIIKRIENACLPVNQYVPKLDKNAINPQELASHIMDRLPATISFQ 68
Query: 55 QLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK--SFSETIKDMYNHYNERSGLK 112
++D+ A+ A +HPD+ LA R SN+HKNTK+ SFS T + + + + +G
Sbjct: 69 EMDDFLADYAKTKIVDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHPGTGKP 128
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK-------VVE 165
A ++ D YE +M NA LD+ I Y D+ + FG +TLE SYL+K+ +VE
Sbjct: 129 ASVVNDTYYENVMANAEILDAVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKKRILVE 188
Query: 166 RPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
RPQ M+MRV++GIH DI S I+TY +MS+ +FTHASPTLFN GT PQLSSCFL+ ++D
Sbjct: 189 RPQDMIMRVAVGIHGSDIKSVIETYDLMSRHYFTHASPTLFNCGTVTPQLSSCFLLGLQD 248
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSIEGIY+TLKE A+ISK+AGG+G+ H++RA GS I +GT G++ L++FN + +
Sbjct: 249 DSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAFLQIFNVSVKK 308
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
V QGG KR+GA A+Y+ WH D+ +F++ +KN G E+ R RDL A+WV DLFMERV+
Sbjct: 309 VSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLLPAIWVSDLFMERVKAG 368
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYM 405
WSL CP+E GL+D G EF+ LY YE EGK K+VV+A+ L+ +I +++IETGTPY+
Sbjct: 369 KNWSLMCPHECPGLSDVHGEEFKALYEKYEAEGKGKEVVKARALFDQINSARIETGTPYV 428
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
FKDT NRKSNQ+N+G IKSSNLCTEI++Y+ ETAVCNLASIA+ +FV+ +P
Sbjct: 429 CFKDTINRKSNQENVGIIKSSNLCTEIVQYSDSEETAVCNLASIAVNKFVKYFPIP---- 484
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
S + D+ ++ V I+T NL+K+IDVN+Y V+ R SN++ RP+G+GVQ
Sbjct: 485 ---------SLRPYVDYREMKRVVKIMTRNLDKVIDVNFYAVDKTRISNMKTRPMGLGVQ 535
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG-PYETYHNSPVSKGI 584
GLAD F L + FES EA +NK IFETIYY AL+ S EIA ++G YE + SP+SKGI
Sbjct: 536 GLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETYELFEGSPLSKGI 595
Query: 585 LQPDM-----------WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNN 633
Q DM +N +P DW LR I K GV NS+ VAPMPTAST+QILGN+
Sbjct: 596 FQFDMGKENIKNRDIYFNSLPIH--DWEQLRRDIMKYGVHNSMFVAPMPTASTAQILGNS 653
Query: 634 ECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPE 693
E FEP TSN+Y+R VLSG F VVN++++ +L ++G W+ K +I+ GS+Q +P IP+
Sbjct: 654 ESFEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASGGSIQTLPNIPK 713
Query: 694 ELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKT 753
K ++KTVWEI T +DMA+ RG ++DQ+QSLN+ +++P KV S+ W +G+KT
Sbjct: 714 STKELFKTVWEINPRTTLDMAIQRGMFVDQAQSLNLFVEEPELSKVRSMTMYAWEKGIKT 773
Query: 754 GMYYLRSRAAADAIKFTVDTSVFKE-KPEKPE-------------------LVVDDETKM 793
+YYLR++ AA A++FTVD +V +E K E P +VV D
Sbjct: 774 -LYYLRTKGAARAVQFTVDKNVLQEVKKEAPSPVAAFSAPVREEEEEKKSSIVVPDPA-- 830
Query: 794 AQVVCSLTNREECMACGS 811
A ++CS+ N C C S
Sbjct: 831 AALLCSINNPGACEMCSS 848
>gi|448933310|gb|AGE56866.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus NE-JV-3]
Length = 763
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/782 (48%), Positives = 515/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARIAVSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ + + + YDRD+D+DYFGF T+ R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMRRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + +DI +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+ + WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E LY YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L M F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P+ K ++S+ F W +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|448925474|gb|AGE49053.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus Br0604L]
Length = 763
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/782 (48%), Positives = 514/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARIAVSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSNSVLDTYTKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ + S + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEHEFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + DI +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGKDITKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+T+ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL+D +G E+E LY YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLSDAFGKEYEDLYLRYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L ++
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYI-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + ++ +NL++ IDV Y + A SN+ RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKVLAKNLDRSIDVMSYAIPEAMTSNMHRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L M F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAARNLNREIFEHIYFAAMEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLGERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPTMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|155371048|ref|YP_001426582.1| hypothetical protein ATCV1_Z101L [Acanthocystis turfacea Chlorella
virus 1]
gi|155124368|gb|ABT16235.1| hypothetical protein ATCV1_Z101L [Acanthocystis turfacea Chlorella
virus 1]
Length = 763
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/782 (48%), Positives = 515/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARIAVSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + +DI +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+ + WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E LY YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTI SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 414 SVNVKNMQSNAGTITGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L M F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P+ K ++S+ F W +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|448933990|gb|AGE57544.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus NTS-1]
Length = 763
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/782 (48%), Positives = 515/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-----------HCDPVLVSQKVCAGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARIAVSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ +++ + + YDRD+D+DYFGF T++R YL KV GK+VERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQELVKYDRDYDFDYFGFSTMKRLYLTKVGGKIVERPQH 175
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
+RV+I + +DI +TY +S+R FTHASPTLFNAG L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+++L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+W+ DLFM+RV+ + WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P E GL D +G E+E LY YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
+ N K+ Q N GTIK SNLC EI+EYT+ ETAVC + SI L +V
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTATDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + ++ +NL+K IDV Y + AR SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKVLAKNLDKSIDVMSYAIPEARTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L M F+S A+ LN++IFE IY+ A++ S E+A + GP+ T+ SP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAARNLNREIFEHIYFAAVEASCELADEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGSEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
+GEF +VN +L+ DL G WS +KN+II + GS+Q++ I ELK IYKT WE+ T
Sbjct: 633 AGEFPMVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++DQ+QS+N+ + P+ K +TS+ F W +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|371944844|gb|AEX62665.1| ribonucleoside-diphosphate reductase large subunit [Moumouvirus
Monve]
Length = 849
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/820 (45%), Positives = 533/820 (65%), Gaps = 38/820 (4%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
+G Q+ + + + + + ++ EH + + V + T ++ ++
Sbjct: 49 NGVQQPLQREVVKKYVVSIFQKMNIEHLNVDSLVNNVYPKLKDVNTLLDVENQIIASSTE 108
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
M T+H DY A I ++NLH+NT + + + + M + N ++G +AP+++ D Y+ ++K
Sbjct: 109 MLTDHYDYPKTAVYILINNLHENTNEDYLKVVTMMRKNIN-KNGKRAPIVSKDFYKFVLK 167
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH--KDDID 184
+ ++ ++ Y+RD+D FG++TLERSYL K G +VERPQH+ MRV+I +H ++
Sbjct: 168 HNDKINEQLKYERDYDISIFGYRTLERSYLKKCNGMIVERPQHLWMRVAIALHYRTGNLS 227
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKS 244
+TY M+S+ +FTHA+PTLFNAGTP QLSSCFL+ +KDD + + E+ K+CAVISK
Sbjct: 228 KIFETYEMLSEGYFTHATPTLFNAGTPYEQLSSCFLMGVKDD-MTSLGESWKDCAVISKF 286
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIG+++ N+R G+YI T GTSNG+ +L ++ND ARY +QGG KR G+FAV++EPW
Sbjct: 287 AGGIGINMSNVRVEGAYISSTQGTSNGL-RVLSIYNDIARYANQGG-KRAGSFAVFIEPW 344
Query: 305 HADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWG 364
H DIF FL+LKKN G E RARDLF L + ++FM+RV+ + WSL CP++ + +G
Sbjct: 345 HGDIFFFLDLKKNTGAETERARDLFLGLMINNIFMDRVEKDENWSLMCPSQCPDIVGKYG 404
Query: 365 AEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIK 424
EF K Y YE EG+ K ++A++LWF+I+ +QIETG PY+LFKD N+KSNQ N+G I
Sbjct: 405 EEFNKAYLKYENEGRFIKQIKARDLWFKIMETQIETGVPYILFKDAINQKSNQINIGVIN 464
Query: 425 SSNLCTEIIEYTSPTETAVCNLASIALPRF-VREKDVPVESHPSRIVGSRGSKNRFFDFE 483
SNLC EI+E++S E AVCNL+SI LP+F + E VP FD+
Sbjct: 465 GSNLCCEIVEFSSADEYAVCNLSSICLPKFIIHENGVPE-----------------FDYN 507
Query: 484 KLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEA 543
KL +V I+T NLN IIDVNYYPVE R SNLRHRPIG+GVQGLAD F + + F+S A
Sbjct: 508 KLYKVARIITRNLNNIIDVNYYPVEKTRVSNLRHRPIGVGVQGLADVFAIFKIPFDSDIA 567
Query: 544 QQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDRWDW 600
+ LNK IFETIY+ + S ++A + GPYET+ SP+SKG Q D+WN+ S WDW
Sbjct: 568 RDLNKKIFETIYFGTMTESLQMAKESGPYETFWGSPLSKGKFQFDLWNLSEDKLSGMWDW 627
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I GVRNSL MPTASTSQI G NEC EP+T NIYSR L+G++ V+NK+L
Sbjct: 628 KTLREQIMIYGVRNSLTTTCMPTASTSQIKGYNECIEPFTENIYSRSTLAGDYYVINKYL 687
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL E+G+W+ + + I Y GS+ IP IP+ +K IY+TVWEI Q +++DMA DR +
Sbjct: 688 IKDLMELGLWNSDMVDLIKYYQGSIANIPNIPQNIKNIYRTVWEIPQQSIIDMAADRAPF 747
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQ+QS+NI +++P+F K+ S F + +GLKTGMYYLR + A+ A +F +D KE
Sbjct: 748 IDQTQSMNIFIEKPDFVKLNSCLFYAYRKGLKTGMYYLRGKPASSANQFGIDIEKIKEIE 807
Query: 781 EKPEL------VVDDETKMAQVVCSLTNRE-----ECMAC 809
K + ++ D+ M +C + +C++C
Sbjct: 808 AKNNIKIRVQNIIIDQEPMQLRICQYVPKHLRKPGDCLSC 847
>gi|441432444|ref|YP_007354486.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
moumouvirus]
gi|440383524|gb|AGC02050.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
moumouvirus]
Length = 849
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/820 (45%), Positives = 533/820 (65%), Gaps = 38/820 (4%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
+G Q+ + + + + + ++ EH + + V + T ++ ++
Sbjct: 49 NGVQQPLQREVVKKYVVSIFQKMNIEHLNVDSLVNNVYPKLKDVNTLLDVENQIIASSTE 108
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
M T+H DY A I ++NLH+NT + + + + M + N ++G +AP+++ D Y+ ++K
Sbjct: 109 MLTDHYDYPKTAVYILINNLHENTNEDYLKVVTMMRKNIN-KNGKRAPIVSKDFYKFVLK 167
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH--KDDID 184
+ ++ ++ Y+RD+D FG++TLERSYL K G +VERPQH+ MRV+I +H ++
Sbjct: 168 HNDKINEQLKYERDYDISIFGYRTLERSYLKKCNGMIVERPQHLWMRVAIALHYRTGNLS 227
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKS 244
+TY M+S+ +FTHA+PTLFNAGTP QLSSCFL+ +KDD + + E+ K+CAVISK
Sbjct: 228 KIFETYEMLSEGYFTHATPTLFNAGTPYEQLSSCFLMGVKDD-MTSLGESWKDCAVISKF 286
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIG+++ N+R G+YI T GTSNG+ +L ++ND ARY +QGG KR G+FAV++EPW
Sbjct: 287 AGGIGINMSNVRVEGAYISSTQGTSNGL-RVLSIYNDIARYANQGG-KRAGSFAVFIEPW 344
Query: 305 HADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWG 364
H DIF FL+LKKN G E RARDLF L + ++FM+RV+ + WSL CP++ + +G
Sbjct: 345 HGDIFFFLDLKKNTGAETERARDLFLGLMINNIFMDRVEKDENWSLMCPSQCPDIVGKYG 404
Query: 365 AEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIK 424
EF K Y YE EG+ K ++A++LWF+I+ +QIETG PY+LFKD N+KSNQ N+G I
Sbjct: 405 EEFNKAYLKYENEGRFIKQIKARDLWFKIMETQIETGVPYILFKDAINQKSNQINIGVIN 464
Query: 425 SSNLCTEIIEYTSPTETAVCNLASIALPRF-VREKDVPVESHPSRIVGSRGSKNRFFDFE 483
SNLC EI+E++S E AVCNL+SI LP+F + E VP FD+
Sbjct: 465 GSNLCCEIVEFSSADEYAVCNLSSICLPKFIIHENGVPE-----------------FDYN 507
Query: 484 KLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEA 543
KL +V I+T NLN IIDVNYYPVE R SNLRHRPIG+GVQGLAD F + + F+S A
Sbjct: 508 KLYKVARIITRNLNNIIDVNYYPVEKTRVSNLRHRPIGVGVQGLADVFAIFKIPFDSDIA 567
Query: 544 QQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SDRWDW 600
+ LN+ IFETIY+ + S ++A + GPYET+ SP+SKG Q D+WN+ S WDW
Sbjct: 568 RDLNRKIFETIYFGTMTESLQMAKESGPYETFWGSPLSKGKFQFDLWNLGEDKLSGMWDW 627
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I GVRNSL MPTASTSQI G NEC EP+T NIYSR L+G++ V+NK+L
Sbjct: 628 KTLREQIMIYGVRNSLTTTCMPTASTSQIKGYNECIEPFTENIYSRSTLAGDYYVINKYL 687
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL E+G+W+ + + I Y GS+ IP IP+ +K IY+TVWEI Q +++DMA DR +
Sbjct: 688 IKDLMELGLWNSDMVDLIKYYQGSIANIPNIPQNIKNIYRTVWEIPQQSIIDMAADRAPF 747
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQ+QS+NI +++P+F K+ S F + +GLKTGMYYLR + A+ A +F +D KE
Sbjct: 748 IDQTQSMNIFIEKPDFVKLNSCLFYAYRKGLKTGMYYLRGKPASSANQFGIDIEKIKEIE 807
Query: 781 EKPEL------VVDDETKMAQVVCSLTNRE-----ECMAC 809
K + ++ D+ M +C + +C++C
Sbjct: 808 AKNNIKIRVQNIIIDQEPMQLRICQYVPKHLRKPGDCLSC 847
>gi|311977696|ref|YP_003986816.1| ribonucleoside-diphosphate reductase large subunit [Acanthamoeba
polyphaga mimivirus]
gi|81990393|sp|Q7T6Y8.2|RIR1_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|55664860|gb|AAQ09572.2| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
mimivirus]
gi|308204750|gb|ADO18551.1| ribonucleoside-diphosphate reductase large subunit [Acanthamoeba
polyphaga mimivirus]
gi|339061249|gb|AEJ34553.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
mimivirus]
gi|351737467|gb|AEQ60502.1| ribonucleotide reductase large subunit [Acanthamoeba castellanii
mamavirus]
gi|398257153|gb|EJN40761.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
lentillevirus]
Length = 881
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/826 (45%), Positives = 534/826 (64%), Gaps = 44/826 (5%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
+G + + + I ++K+ + H D +++ + + T +D TA+
Sbjct: 75 NGSIQVITSEIIRTYVEKIFEKMEVTHLDIDKMTKNIFPKLKSINTIKDIDNQIISTASE 134
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMK 126
M T+H DY +A I ++NLH NT F ET + +YN+ +E S AP+I+++IY I K
Sbjct: 135 MVTDHYDYPKIAVWILMTNLHDNTSDDFLETAEKLYNNKSE-SNKNAPIISENIYNFIKK 193
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH--KDDID 184
+ ++ I YDRD++ FGF+TLE+SYL ++ K+VERPQH+ MRV+I +H K+D+D
Sbjct: 194 HIKEINRVIRYDRDYNLTIFGFRTLEKSYLKRINKKIVERPQHLFMRVAITLHYRKNDLD 253
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKS 244
+TY +S+ +FTHA+PTLFNAGT QLSSCFL+ + DS+E I E KECA+ISK
Sbjct: 254 RIFETYKYLSKGYFTHATPTLFNAGTTHEQLSSCFLLGI-GDSLEEISECWKECALISKH 312
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIG+ + NIR G+YI T G + G+ +L +FND +RY +QGG KR G+FA+++EPW
Sbjct: 313 AGGIGIHMTNIRVEGAYIASTQGEAGGL-RVLTIFNDISRYANQGG-KRPGSFAIFIEPW 370
Query: 305 HADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWG 364
H DIF FL+LKKN G E RARDLF L + D+FMERV + WSL CP++ L + +G
Sbjct: 371 HGDIFFFLDLKKNTGAETERARDLFLGLMINDIFMERVYKDDVWSLMCPSQCPNLLNKYG 430
Query: 365 AEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIK 424
EF K Y YE EG K ++A +LWF+I+ SQIETG PY++FKD N KSNQ N+G +
Sbjct: 431 DEFTKEYLKYESEGIYLKQIRAIDLWFKIMESQIETGVPYVMFKDAINDKSNQINIGVVN 490
Query: 425 SSNLCTEIIEYTSPTETAVCNLASIALPRFVREKD-VPVESHPSRIVGSRGSKNRFFDFE 483
SNLC EI+E + +VCNL+SI LPRFV+ D VP F+++
Sbjct: 491 GSNLCCEIVEVSDKNNFSVCNLSSICLPRFVKIIDEVPT-----------------FNYQ 533
Query: 484 KLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEA 543
KL +++ I+T NLN IID+N+YP++ R +NLR RPIGIGVQGLAD F + F+S A
Sbjct: 534 KLFKISRILTRNLNNIIDINFYPLDKTRITNLRDRPIGIGVQGLADVFAMFKTPFDSEIA 593
Query: 544 QQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD---RWDW 600
+ LN+ IFETIYY AL S+++A + G Y+TY SP+S+G Q D+WN S WDW
Sbjct: 594 RDLNRKIFETIYYGALTESNKLAREFGTYQTYQGSPISQGKFQFDLWNFDKSQLSGMWDW 653
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+LR I +GVRNSL+ MPTASTSQI+G NEC EPYT NIYSR ++GE+ V+NKHL
Sbjct: 654 ELLRQEILNHGVRNSLVTTCMPTASTSQIMGWNECIEPYTENIYSRSTMAGEYFVINKHL 713
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
+ DL E+G+W+ + + I Y GSV IP IP+ +K IY+TVWEI Q ++++MA DR +
Sbjct: 714 IKDLIELGVWNSEMVDLIKYYKGSVANIPNIPDNIKAIYRTVWEIPQKSIIEMAADRAPF 773
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
+DQ+QS+N+++D+P+F ++ S F W +GLKTGMYYLRS+ A+ A +F +D KE
Sbjct: 774 VDQTQSMNLYIDKPSFARLNSCLFYAWRKGLKTGMYYLRSKPASSANQFGIDIDKIKEIE 833
Query: 781 EKPELVVDDET------------KMAQVVCS-----LTNREECMAC 809
K + ++T +++ +VC L EC++C
Sbjct: 834 SKNGIKKQEDTFDLTDLTNTINQQVSGMVCRFVPAHLRKPGECLSC 879
>gi|9632159|ref|NP_048985.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|2447101|gb|AAC96959.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 771
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/785 (49%), Positives = 529/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + ++++ + D + VCA +
Sbjct: 14 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 73
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 74 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 126
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D E + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 127 ----AHLLNEDFKENLEKHADEYQAFVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 182
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFN+G + QL+SCFL+ + +DS+
Sbjct: 183 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 241
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 242 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 301
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H DI +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 302 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 360
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LYT YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 361 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 420
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
DT N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 421 DTVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 467
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN R RPIG+GVQGL
Sbjct: 468 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKRRRPIGVGVQGLQ 520
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+SPEA+ LN++IFE IYY A++ S E+A GP+ T+ SP SKGILQ
Sbjct: 521 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 580
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
MW+V P DW L + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 581 MWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 639
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +K +YKT W++
Sbjct: 640 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 699
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP K VTS+ F W GLK+ YYLRS+ A+ AI
Sbjct: 700 SVIDMAADRGAFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 759
Query: 769 FTVDT 773
TVDT
Sbjct: 760 VTVDT 764
>gi|298707147|emb|CBJ29920.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 821
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/691 (53%), Positives = 487/691 (70%), Gaps = 47/691 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR+E V FDKITAR+++L +GL + DPVLV+QKV G+Y GVTT +LD LA
Sbjct: 173 MHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLVAQKVVQGIYSGVTTWELDTLA 232
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AET A M T HP YA LAARI+VSNL + T SF++T+++++ + + ++G +A I+D++
Sbjct: 233 AETCAYMNTEHPHYARLAARISVSNLQRATSPSFADTVEELHAYVDPKTGRQAGYISDEV 292
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+EI+MKN +D+E+ ++RDF D+FGFKTLER+YLLK+ KV+ERPQ+M MR++IGIH
Sbjct: 293 HEIVMKNRDLIDAEVKHERDFSLDFFGFKTLERAYLLKLGDKVMERPQYMFMRIAIGIHG 352
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D+++A +TYH+MS++WF HASPTLF+AGT +PQLSSCFL+ K+DSI GIY+TLK+
Sbjct: 353 EDLEAAFETYHLMSEKWFIHASPTLFHAGTCQPQLSSCFLLTTKEDSIAGIYDTLKQWHS 412
Query: 241 ISKSAG-GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
+ AG + V V + GS N + P L++ + Q F +
Sbjct: 413 VGAGAGFVLAVVVSSSVCVGSISVRANLPTFLCSPRLKIDPVSCPCSHQ------PMFPL 466
Query: 300 YL--EPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEAS 357
L +P D+F L + DLF MERV+ +G+WSL CP++
Sbjct: 467 PLCTQPLKRDLFYGLWIP-----------DLF---------MERVEQDGEWSLMCPSQCP 506
Query: 358 GLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ 417
GL++CWG EFE+LYT YEREGK + V+AQ+LWF IL +Q ETG PYM++KD CNRKSN
Sbjct: 507 GLSECWGKEFEELYTKYEREGKYMRKVRAQDLWFAILDAQTETGNPYMMYKDACNRKSNH 566
Query: 418 QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKN 477
++LGTI+SSNLCTEI+EYT P E AVCNL S+ LP+FV E
Sbjct: 567 KHLGTIQSSNLCTEIVEYTDPGEVAVCNLGSVVLPKFVSE------------------DG 608
Query: 478 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMA 537
+ FD ++L EVT + NLNKIIDVN+YPVE A+ SN RHRP+GIGVQGLAD FI + M
Sbjct: 609 KSFDHQRLFEVTKVFVRNLNKIIDVNWYPVEEAQHSNARHRPMGIGVQGLADAFIKMRMP 668
Query: 538 FESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR 597
FES A+ LN+DIFET+Y+ A+ S E+A KEGPYET+ SPVSKGI Q DMW PSDR
Sbjct: 669 FESEGARALNRDIFETMYFAAMTASCELAEKEGPYETFEGSPVSKGIFQFDMWGETPSDR 728
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR ++K+GVRNSLL+APMPTAST+QILG NEC EPYTSN+Y+RRV +GEF+VVN
Sbjct: 729 WDWASLRTRVAKHGVRNSLLLAPMPTASTAQILGFNECIEPYTSNLYARRVKAGEFIVVN 788
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKI 688
HL DL EMG+WSP+++N+++ GS+ I
Sbjct: 789 PHLFTDLMEMGLWSPSVRNQLMASGGSIASI 819
>gi|448933916|gb|AGE57471.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NE-JV-4]
Length = 766
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/785 (49%), Positives = 529/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + ++++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D E + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQTLVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H DI +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LYT YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN R RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKRRRPIGVGVQGLQ 515
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+SPEA+ LN++IFE IYY A++ S E+A GP+ T+ SP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W+V P DW L + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +K +YKT W++
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP+ K VTS+ F W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|27882097|gb|AAH44356.1| Rrm1 protein [Danio rerio]
Length = 498
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/517 (67%), Positives = 417/517 (80%), Gaps = 19/517 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +TT HPDYA LAARIAVSNLHK TKK FSE ++D+YN+ N + +P+I+ +
Sbjct: 61 AEIAATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIF+FL LKKN GKEE RARDLFYALW+PDLFM+RV+TNG WSL CPN+ GL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPNDCPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFEKLY YE+EG+AK+VV+AQ LW+ I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL +V + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYV-------------------TSERTF 461
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
DF+KLA VT ++ +NLNKIID+NYYPV+ RS H
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDINYYPVKDGCRSRSLH 498
>gi|448931908|gb|AGE55469.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus MA-1E]
Length = 766
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/785 (49%), Positives = 528/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + ++++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D E + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQALVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H DI +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LYT YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN R RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKRRRPIGVGVQGLQ 515
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+SPEA+ LN++IFE IYY A++ S E+A GP+ T+ SP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W+V P DW L + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +K +YKT W++
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP K VTS+ F W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMATDRGAFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|197247241|gb|AAI65359.1| Rrm1 protein [Danio rerio]
Length = 509
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/517 (67%), Positives = 417/517 (80%), Gaps = 19/517 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 12 MHVIKRDGRQERVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 71
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA +TT HPDYA LAARIAVSNLHK TKK FSE ++D+YN+ N + +P+I+ +
Sbjct: 72 AEIAATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKET 131
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIHK
Sbjct: 132 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DI +AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 192 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 252 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 311
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIF+FL LKKN GKEE RARDLFYALW+PDLFM+RV+TNG WSL CPN+ GL
Sbjct: 312 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPNDCPGLD 371
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+CWG EFEKLY YE+EG+AK+VV+AQ LW+ I+ SQ ETGTPYML+KD CNRKSNQQNL
Sbjct: 372 ECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 431
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLASIAL +V + R F
Sbjct: 432 GTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYV-------------------TSERTF 472
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
DF+KLA VT ++ +NLNKIID+NYYPV+ RS H
Sbjct: 473 DFQKLASVTKVIVKNLNKIIDINYYPVKDGCRSRSLH 509
>gi|269860694|ref|XP_002650066.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
gi|220066497|gb|EED43976.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
Length = 778
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/742 (49%), Positives = 504/742 (67%), Gaps = 30/742 (4%)
Query: 38 LVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSET 97
L KV +G+ +T +++ + +E AA M T HP Y LAA I + +LH+NT +FS+
Sbjct: 28 LFFDKVSSGLALDMTPTEMTKYCSEIAATMITIHPSYNKLAAIILIKHLHENTFNTFSD- 86
Query: 98 IKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLL 157
K MY + + D I E+I+ N +S + Y+RD+++DYF +L++SY +
Sbjct: 87 -KMMYIQQEKN------IFDDHIMELIINNMNVYNSIVKYERDYNFDYFALISLQKSYQI 139
Query: 158 KVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSS 217
+V V+ERPQ + MRV+I +H DD ++ KTY ++SQ+++THA+PTL+N+ + QL+S
Sbjct: 140 QVNNTVIERPQDIYMRVAIELHGDDFNNVQKTYDLLSQQYYTHATPTLYNSCFKKNQLAS 199
Query: 218 CFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MK D+I GI++T+KE A+ SK +GG+G+ + N+R S + T G S GI+P+++
Sbjct: 200 CFLLGMKSDTIAGIFDTIKEAAIYSKLSGGVGLHISNLRCDKSQLVTTGGYSKGIIPIVK 259
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDL 337
+ ND+ +Y++QGG +R A YLEPWH DI +FL+L+KN G EE RARD F ALW+ DL
Sbjct: 260 LINDSMKYINQGGARRCATCAFYLEPWHKDILKFLDLRKNTGIEEERARDSFTALWINDL 319
Query: 338 FMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQ 397
FMERV+ N WSLF PN A GL D WG +F KLY +YE E + + AQ LW EI+ SQ
Sbjct: 320 FMERVEKNEMWSLFDPNIAKGLQDVWGDQFNKLYAYYE-ETIERTTIPAQKLWKEIICSQ 378
Query: 398 IETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVRE 457
IETGTPYM +KDTCNR SNQ N+GTIKSSNLC EII+Y+ TAVCNLASI LP++V+
Sbjct: 379 IETGTPYMCYKDTCNRYSNQNNIGTIKSSNLCAEIIQYSDSDITAVCNLASICLPKYVK- 437
Query: 458 KDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
+ S S N +FDF++L V IVT N+NK+ID + +P E +++ N
Sbjct: 438 ------------INSTTS-NYYFDFQELYTVVKIVTYNMNKMIDKSAFPTEESKKGNSLF 484
Query: 518 RPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHN 577
RPIGIGVQGLAD F L+G +FES EA+ LNK IFET+Y+ AL+ S E+A K GPY Y
Sbjct: 485 RPIGIGVQGLADVFFLMGYSFESKEARDLNKMIFETLYFGALEASCELAQKHGPYSYYQG 544
Query: 578 SPVSKGILQPDMW-------NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQIL 630
S S+GI + + N I S W+W LR + GVRNSL +A MPTASTSQI
Sbjct: 545 SMYSQGIFHFEKFCEGRINVNEILSGMWNWEELRIKMKTYGVRNSLTLALMPTASTSQIC 604
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPE 690
GN+EC EP SNI++RR +GEF +VNK+L+ DL ++G+W+ IK II +GS+QKIP
Sbjct: 605 GNSECIEPIQSNIFTRRTFAGEFQIVNKYLMKDLIKLGLWNNEIKQLIIEYEGSIQKIPI 664
Query: 691 IPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRG 750
IP+ +K +YKTVWE+K +++DMA+DR ++DQSQSLN+ + +P + ++S+HF W
Sbjct: 665 IPQHVKDLYKTVWELKMKSVLDMAIDRQAFVDQSQSLNLFVKEPTYGILSSMHFYGWKNK 724
Query: 751 LKTGMYYLRSRAAADAIKFTVD 772
LKTGMYYLR+ A AIKFTVD
Sbjct: 725 LKTGMYYLRTCPLAKAIKFTVD 746
>gi|448931166|gb|AGE54729.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus KS1B]
Length = 766
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/785 (49%), Positives = 528/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + ++++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D E + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQTLVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H DI +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LYT YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 515
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+SPEA+ LN++IFE IYY A++ S E+A GP+ T+ SP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHATFEGSPASKGILQYH 575
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W+V P DW L + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPQSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +K +YKT W++
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP+ K VTS+ F W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448929110|gb|AGE52679.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CvsA1]
Length = 766
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/785 (49%), Positives = 530/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + ++++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAY------ 118
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
+G+ A L+ +D E + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 119 AGI-AHLLNEDFKENLEKHADEYQALVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H DI +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LYT YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKMRRPIGVGVQGLQ 515
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+SPEA+ LN++IFE IYY A++ S E+A GP+ T+ SP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W+V P DW L + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +K +YKT W++
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP K VTS+ F W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448925052|gb|AGE48633.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus AN69C]
gi|448930475|gb|AGE54040.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus IL-3A]
Length = 766
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/785 (49%), Positives = 528/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + ++++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D E + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQTLVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H DI +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LYT YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 515
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+SPEA+ LN++IFE IYY A++ S E+A GP+ T+ SP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W+V P DW L + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPQSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +K +YKT W++
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP+ K VTS+ F W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448928094|gb|AGE51666.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CviKI]
Length = 766
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/785 (49%), Positives = 527/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + ++++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D E + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQALVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H DI +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LYT YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 515
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+SPEA+ LN++IFE IYY A++ S E+A GP+ T+ SP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W+V P DW L + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPKSNLDWRGLEKRV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +K +YKT W++
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP+ K VTS+ F W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|157953938|ref|YP_001498829.1| hypothetical protein AR158_C748R [Paramecium bursaria Chlorella
virus AR158]
gi|156068586|gb|ABU44293.1| hypothetical protein AR158_C748R [Paramecium bursaria Chlorella
virus AR158]
gi|448931537|gb|AGE55099.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus MA-1D]
gi|448934986|gb|AGE58538.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NY-2B]
Length = 767
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/784 (49%), Positives = 523/784 (66%), Gaps = 46/784 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + + ++ D + VCA +
Sbjct: 10 MVVLKRDGSKENISFDKILQRIQRLCWPIDSKPVYKGSRAMTGLSVDVSKIVASVCASIV 69
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 70 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 122
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L++DD E I K+A S I YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 123 ----AHLLSDDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNKIVERPQ 178
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFNAG + QL+SCFLV + +DS+
Sbjct: 179 HVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCFLVTV-EDSL 237
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ IR GS I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 238 GDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAYANQ 297
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H D+ +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 298 GG-RRKGSFAIYLEPHHPDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 356
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LY YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 357 SLFDPSECPGLTDAFGDEYAELYERYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVSNK 416
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 417 DAVNKKNMQMNAGTIRGSNLCNEIVEYTSKEETAVCVIGSVVLKNYV------------- 463
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 464 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 516
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+S EA+ LN++IFE IYY A++ S E+A GPY T+ SP SKGILQ
Sbjct: 517 DVFFKLKLPFDSSEARDLNREIFEHIYYAAVEASIELAEIHGPYPTFEGSPASKGILQYH 576
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W+V P DW L + + K GVRNSL+ A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 577 LWDVTPKSNLDWRGLEERV-KKGVRNSLVTALMPTASTAQICGSIEAFEPITSNLYSRRT 635
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS ++KN+II + GS+QK+ I +K +YKT W++
Sbjct: 636 LAGEFPVVNSYLVRELIERGTWSESMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 695
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP K VTS+ F W GLKT YYLRS+ ++ AI
Sbjct: 696 SVIDMAADRGPFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKTLQYYLRSKPSSSAIA 755
Query: 769 FTVD 772
T+D
Sbjct: 756 VTID 759
>gi|448930855|gb|AGE54419.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus IL-5-2s1]
Length = 767
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/784 (49%), Positives = 523/784 (66%), Gaps = 46/784 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + + ++ D + VCA +
Sbjct: 10 MVVLKRDGSKENISFDKILQRIQRLCWPIDSKPVYKGSRAMTGLSVDVSKIVASVCASIV 69
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 70 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 122
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L++DD E I K+A S I YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 123 ----AHLLSDDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNKIVERPQ 178
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFNAG + QL+SCFLV + +DS+
Sbjct: 179 HVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCFLVTV-EDSL 237
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ IR GS I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 238 GDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAYANQ 297
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H D+ +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 298 GG-RRKGSFAIYLEPHHPDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 356
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LY YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 357 SLFDPSECPGLTDAFGDEYAELYERYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVSNK 416
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 417 DAVNKKNMQMNAGTIRGSNLCNEIVEYTSKEETAVCVIGSVVLKNYV------------- 463
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 464 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 516
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+S EA+ LN++IFE IYY A++ S E+A GPY T+ SP SKGILQ
Sbjct: 517 DVFFKLKLPFDSSEARDLNREIFEHIYYAAVEASIELAEIHGPYPTFEGSPASKGILQYH 576
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W+V P DW L + + K GVRNSL+ A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 577 LWDVTPKSNLDWRGLEERV-KKGVRNSLVTALMPTASTAQICGSIEAFEPITSNLYSRRT 635
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS ++KN+II + GS+QK+ I +K +YKT W++
Sbjct: 636 LAGEFPVVNSYLVRELIERGTWSESMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 695
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + P+ K VTS+ F W GLKT YYLRS+ ++ AI
Sbjct: 696 SVIDMATDRGAFVDQTQSMNLFLAAPSLKNVTSMLFYGWKSGLKTLQYYLRSKPSSSAIA 755
Query: 769 FTVD 772
T+D
Sbjct: 756 VTID 759
>gi|448935365|gb|AGE58916.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NYs1]
Length = 767
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/784 (49%), Positives = 522/784 (66%), Gaps = 46/784 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE------------HCDPVLVSQKVCAGVY 48
M V+KRDG +E + FDKI R+++L + + ++ D + VCA +
Sbjct: 10 MVVLKRDGSKENISFDKILQRIQRLCWPIDSKPVYKGSRAMTGLSVDVSKIVASVCASIV 69
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI+VSNL K T + I D Y
Sbjct: 70 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 122
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L++DD E I K+A S I YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 123 ----AHLLSDDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNKIVERPQ 178
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
H+ +RV+IG+ DI +TY +S R FTHASPTLFNAG + QL+SCFLV + +DS+
Sbjct: 179 HVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCFLVTV-EDSL 237
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY+ L +CA +SK GG+G+++ IR GS I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 238 GDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAYANQ 297
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG +RKG+FA+YLEP H D+ +FL +K+N G+E RAR+LFYA+W+ DLFM+RV+T+ QW
Sbjct: 298 GG-RRKGSFAIYLEPHHPDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 356
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLF P+E GL D +G E+ +LY YE EGKAK VV+A+++W ++T+ IETG PY+ K
Sbjct: 357 SLFDPSECPGLTDAFGDEYAELYERYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVSNK 416
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D N+K+ Q N GTI+ SNLC EI+EYTS ETAVC + S+ L +V
Sbjct: 417 DAVNKKNMQMNAGTIRGSNLCNEIVEYTSKEETAVCVIGSVVLKNYV------------- 463
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 464 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 516
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F L + F+S EA+ LN++IFE IYY A++ S E+A PY T+ SP SKGILQ
Sbjct: 517 DVFFKLKLPFDSSEARDLNREIFEHIYYAAVEASIELAEIHDPYPTFEGSPASKGILQYH 576
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W+V P DW L + + K GVRNSL+ A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 577 LWDVTPKSNLDWRGLEERV-KKGVRNSLVTALMPTASTAQICGSIEAFEPITSNLYSRRT 635
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
L+GEF VVN +L+ +L E G WS ++KN+II + GS+QK+ I +K +YKT W++
Sbjct: 636 LAGEFPVVNSYLVRELIERGTWSESMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 695
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP K VTS+ F W GLKT YYLRS+ ++ AI
Sbjct: 696 SVIDMAADRGPFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKTLQYYLRSKPSSSAIA 755
Query: 769 FTVD 772
T+D
Sbjct: 756 VTID 759
>gi|9634360|ref|NP_037899.1| ORF139 ribonucleotide reductase large subunit (rr1) [Spodoptera
exigua MNPV]
gi|6960598|gb|AAF33668.1| ORF139 ribonucleotide reductase large subunit (rr1) [Spodoptera
exigua MNPV]
Length = 770
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/789 (48%), Positives = 520/789 (65%), Gaps = 52/789 (6%)
Query: 16 DKITARLKKLSYGLSTEHCD-PVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDY 74
+ +T L L + T + D P LV + V G +L A+ AA+MT H DY
Sbjct: 23 ENLTLLLNSLCKNIDTRYVDVPKLVHKVVAESGDIGFDKIKL--YCADVAASMTYVHYDY 80
Query: 75 ASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSE 134
A LA RI V +LH F D+++ +++D+ +++ K+ A L++E
Sbjct: 81 ALLAGRILVEDLHSKVSSCFVTIANDLFSR---------NVLSDEFNQLVKKHGAILNNE 131
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMS 194
I ++RD++Y YFGFKTL YLLK+ ++ERPQHMLMRV++ IH DD+ S I+TY +MS
Sbjct: 132 IKHERDYNYKYFGFKTLTNGYLLKIDDVIMERPQHMLMRVALAIHGDDVKSVIETYQLMS 191
Query: 195 QRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHN 254
FTHASPTLF+AGT R Q+ SCFL +KDDS++GIY+TL E A+IS GG+G+S N
Sbjct: 192 LGTFTHASPTLFSAGTRRQQMCSCFLQSIKDDSVDGIYKTLHESALISNLGGGLGLSAQN 251
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNL 314
+ GS G+V MLRVFN+ R+VDQGG KRKGA A Y+EPWH +I+EFLNL
Sbjct: 252 --SGGS----------GLVNMLRVFNNMVRHVDQGG-KRKGALAAYIEPWHPEIYEFLNL 298
Query: 315 KKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHY 374
++N G E+ +ARDL LW+PDLFM+RV+ N WSLF LAD +G +FE Y Y
Sbjct: 299 RRNMGSEDTKARDLMLGLWIPDLFMKRVKNNQMWSLFSHKTCPDLADKYGFDFEMRYCDY 358
Query: 375 EREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIE 434
E ++ V+A++L+ I+ + +ETG PYML+KD CN SNQ+NLGTIK SNLC EI++
Sbjct: 359 ENAQVYERQVKARDLFRFIVETNVETGGPYMLYKDHCNNFSNQKNLGTIKCSNLCAEIVQ 418
Query: 435 YTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTE 494
Y ETAVCNLASIA+ + V DV ++ FD+ L +T I+
Sbjct: 419 YCDENETAVCNLASIAVNKCV---DVDAKT---------------FDYVLLKHLTKIIVR 460
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETI 554
NLNKIIDVN+YP + RSN +HRPIG+G+QGLAD F+LL +A++S +A+ +N I ETI
Sbjct: 461 NLNKIIDVNHYPTAESERSNKKHRPIGVGIQGLADAFVLLDIAYDSDDARFVNYSIAETI 520
Query: 555 YYHALKTSSEIAAKEGPYETYHNSPVSKGILQ----PDMWNVIPSDR-WDWGVLRDMISK 609
Y+ AL+ S E+A GPYE+Y +SPVS+GIL D V S+ WDW L+ I+K
Sbjct: 521 YFAALEASCELAKINGPYESYTDSPVSRGILHFHNYDDENGVYHSNNLWDWNELQCNINK 580
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGI 669
GVRNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L+ L ++ I
Sbjct: 581 YGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLVKALIDLDI 640
Query: 670 WSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNI 729
++P ++NKI+ ++GSVQ I EIP+ +K ++KT WEIK +++MA DR +IDQSQSLN+
Sbjct: 641 YTPELRNKILAENGSVQNIDEIPQHVKNLFKTAWEIKSKCIINMAADRAPFIDQSQSLNL 700
Query: 730 HMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDD 789
+ +P + V+S+HF W + LKTGMYYLR++ AA A KFTVD +K ++ DD
Sbjct: 701 FVAEPTYSVVSSIHFYAWEKKLKTGMYYLRTKPAAQATKFTVDVETVASCSKKRKMNDDD 760
Query: 790 ETKMAQVVC 798
+ VVC
Sbjct: 761 D----NVVC 765
>gi|401665770|gb|AFP95882.1| ribonucleotide reductase large subunit [Mamestra brassicae MNPV]
Length = 676
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/689 (50%), Positives = 484/689 (70%), Gaps = 33/689 (4%)
Query: 86 LHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDY 145
+HK +SF++ ++ ++ H L++D++ + +K++ ++ I D DY+Y
Sbjct: 1 MHKYVDESFTKVVQRLHKH---------NLVSDELLSVTIKHSKIIEENIDMKLDLDYNY 51
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTL 205
FG++TL+ YL+K+ KV ER QHM MR+++GI DDIDSAIK+Y +S++ +THASPT+
Sbjct: 52 FGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFGDDIDSAIKSYKFLSRKMYTHASPTM 111
Query: 206 FNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGT 265
F AGT PQ+SSCFL+ M+ DSI GIY TL +CA+ISK GGIG++V+++R S I+ T
Sbjct: 112 FAAGTLTPQMSSCFLLTMESDSIRGIYNTLNDCAMISKHGGGIGLNVNSVRGRNSKIKST 171
Query: 266 NGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRA 325
NGT++G++PMLRVFN+ R+VDQGG KRKGA AVY+EPWH DI + L++++N G E+ +A
Sbjct: 172 NGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVYVEPWHCDIMDVLHMRRNIGSEDTKA 230
Query: 326 RDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQ 385
RDL ALWVPD+FM+RV+ NG WSL CPNE L D +G +FE Y HYE +G+ ++ +
Sbjct: 231 RDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLNDTYGDDFEYWYKHYEDKGQFREQMP 290
Query: 386 AQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCN 445
A L I+ Q ETGTPYML+KD CNRKSNQ N G IK SNLC EI++Y +P ETAVCN
Sbjct: 291 AVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNCGLIKCSNLCAEIVQYCAPDETAVCN 350
Query: 446 LASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYY 505
LASIA+ +++ N FDF+ L V V +LNKIID N+Y
Sbjct: 351 LASIAVNKYI--------------------NNDTFDFQLLHTVVKHVVNSLNKIIDRNFY 390
Query: 506 PVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEI 565
P+ETA++SN+RHRPIGIG+QGLAD F++L + + S A LNK I ET+Y+ AL+ S E+
Sbjct: 391 PIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVSDAAVLLNKQIAETVYHAALEASYEL 450
Query: 566 AAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTAS 625
A+ PY T+ S S+GILQ D+WN +P+ WDW L+ I K G+RNSLLVA MPTA+
Sbjct: 451 ASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDWSQLKINIQKYGLRNSLLVAYMPTAT 510
Query: 626 TSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSV 685
T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L+ DL ++ +++ +++ I+ + GS+
Sbjct: 511 TAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYLVDDLIKLNLYTNSMRKTIMANRGSI 570
Query: 686 QKIPEIPEELKMIYKTVWEIKQMT---LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
I +IP+ LK +Y T+WEI + +++MA DRG +IDQSQS N++M P K+ S+
Sbjct: 571 ASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADRGAFIDQSQSFNVYMANPTLSKMASV 630
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
H W RGLKTGMYYLR+ AA++ +FTV
Sbjct: 631 HMYGWKRGLKTGMYYLRTLPAANSQQFTV 659
>gi|371943944|gb|AEX61772.1| ribonucleoside-diphosphate reductase large subunit [Megavirus
courdo7]
Length = 881
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/776 (46%), Positives = 519/776 (66%), Gaps = 41/776 (5%)
Query: 56 LDELAAETAAA---MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLK 112
LD++ + A+ M +H +Y +A I ++NLH++T + + +++N+ N ++G+
Sbjct: 127 LDDIQNQIIASSSEMMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNIN-KNGIH 185
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
AP+++D Y+ + KN ++ I Y D+ + FGF+TLE+SYL KV+G ++ERPQH+ M
Sbjct: 186 APIVSDGFYKFVKKNRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFM 245
Query: 173 RVSIGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
RV+I IH +D++ +TY M+SQ +FTHA+PTLFNAGT QLSSCFL+ +KDD +
Sbjct: 246 RVAIAIHYRNNDLNRIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGA 304
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I + K+CA+ISK AGGIGV+V NIRA GSYI T GT++G+ +L VFN+ +RY +QGG
Sbjct: 305 IGDCWKDCAMISKYAGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG 363
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KR G+FA+Y+EPWHADI+ FL+LKKN G E RARDLF L + D+F+ERV+ +G WSL
Sbjct: 364 -KRAGSFAIYIEPWHADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSL 422
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDT 410
CP+E + +G EF + Y YE+ GK K + A++LWF+I+ +QIETG PY++FKD
Sbjct: 423 MCPSECPNIVGKYGTEFNEAYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDA 482
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
N KSNQ N+G I SNLC+EI+EY+S E A CNL+SI LPRF+ K+ E
Sbjct: 483 VNYKSNQINIGVINGSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE------- 535
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
FD++ L +V+ I+T NLN +ID+N+YPV+ R SN++HRPIG+GVQG+AD
Sbjct: 536 ---------FDYDMLRKVSGIMTRNLNNVIDINFYPVDKTRVSNIKHRPIGVGVQGVADV 586
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW 590
F + F+S A+ LN+ IFETIY+ L+ S +++ + G YET+ SP+SKG Q D+W
Sbjct: 587 FAIFKTPFDSKLARDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLW 646
Query: 591 NVIPSDR----WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 646
N + SD+ WDW L I K GVRNSL MPTASTSQI+G NEC EP+T NIYSR
Sbjct: 647 N-LSSDKLSGMWDWDSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSR 705
Query: 647 RVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIK 706
L+G++ V+NK+L+ DL ++G+W+ + + I Y GS+ KIP IP+ +K IY+TVWEI
Sbjct: 706 STLAGDYYVINKYLVQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIP 765
Query: 707 QMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADA 766
Q ++++MA +R +IDQ+QS+NI ++ P+F K+ S GLKTGMYYLRS+AA A
Sbjct: 766 QKSIIEMAAERAPFIDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSA 825
Query: 767 IKFTVDTSVFKEKPEKPELVVDD----------ETKMAQVVCS-LTNREECMACGS 811
+F +D KE + ++++ E K Q + L +C++C S
Sbjct: 826 DQFGIDIDKIKEIETRNNIILEKIENIEVDEPIELKPCQYIPKHLRKPGDCISCSS 881
>gi|448825571|ref|YP_007418502.1| ribonucleoside-diphosphate reductase large subunit [Megavirus lba]
gi|444236756|gb|AGD92526.1| ribonucleoside-diphosphate reductase large subunit [Megavirus lba]
Length = 881
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/776 (46%), Positives = 519/776 (66%), Gaps = 41/776 (5%)
Query: 56 LDELAAETAAA---MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLK 112
LD++ + A+ M +H +Y +A I ++NLH++T + + +++N+ N ++G+
Sbjct: 127 LDDIQNQIIASSSEMMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNIN-KNGIH 185
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
AP+++D Y+ + KN ++ I Y D+ + FGF+TLE+SYL KV+G ++ERPQH+ M
Sbjct: 186 APIVSDGFYKFVKKNRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFM 245
Query: 173 RVSIGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
RV+I IH +D++ +TY M+SQ +FTHA+PTLFNAGT QLSSCFL+ +KDD +
Sbjct: 246 RVAIAIHYRNNDLNRIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGA 304
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I + K+CA+ISK AGGIGV+V NIRA GSYI T GT++G+ +L VFN+ +RY +QGG
Sbjct: 305 IGDCWKDCAMISKYAGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG 363
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KR G+FA+Y+EPWHADI+ FL+LKKN G E RARDLF L + D+F+ERV+ +G WSL
Sbjct: 364 -KRAGSFAIYIEPWHADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSL 422
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDT 410
CP+E + +G EF + Y YE+ GK K + A++LWF+I+ +QIETG PY++FKD
Sbjct: 423 MCPSECPNIVGKYGTEFNETYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDA 482
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
N KSNQ N+G I SNLC+EI+EY+S E A CNL+SI LPRF+ K+ E
Sbjct: 483 VNYKSNQINIGVINGSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE------- 535
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
FD++ L +V+ I+T NLN +ID+N+YPV+ R SN++HRPIG+GVQG+AD
Sbjct: 536 ---------FDYDMLRKVSGIMTRNLNNVIDINFYPVDKTRVSNIKHRPIGVGVQGVADV 586
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW 590
F + F+S A+ LN+ IFETIY+ L+ S +++ + G YET+ SP+SKG Q D+W
Sbjct: 587 FAIFKTPFDSELARDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLW 646
Query: 591 NVIPSDR----WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 646
N + SD+ WDW L I K GVRNSL MPTASTSQI+G NEC EP+T NIYSR
Sbjct: 647 N-LSSDKLSGMWDWDSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSR 705
Query: 647 RVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIK 706
L+G++ V+NK+L+ DL ++G+W+ + + I Y GS+ KIP IP+ +K IY+TVWEI
Sbjct: 706 STLAGDYYVINKYLVQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIP 765
Query: 707 QMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADA 766
Q ++++MA +R +IDQ+QS+NI ++ P+F K+ S GLKTGMYYLRS+AA A
Sbjct: 766 QKSIIEMAAERAPFIDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSA 825
Query: 767 IKFTVDTSVFKEKPEKPELVVDD----------ETKMAQVVCS-LTNREECMACGS 811
+F +D KE + ++++ E K Q + L +C++C S
Sbjct: 826 DQFGIDIDKIKEIETRNNIILEKIENIEVDEPIELKPCQYIPKHLRKPGDCISCSS 881
>gi|425701505|gb|AFX92667.1| ribonucleoside-diphosphate reductase large subunit [Megavirus
courdo11]
Length = 881
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/776 (46%), Positives = 519/776 (66%), Gaps = 41/776 (5%)
Query: 56 LDELAAETAAA---MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLK 112
LD++ + A+ M +H +Y +A I ++NLH++T + + +++N+ N ++G+
Sbjct: 127 LDDIQNQIIASSSEMMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNIN-KNGIH 185
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
AP+++D Y+ + KN ++ I Y D+ + FGF+TLE+SYL KV+G ++ERPQH+ M
Sbjct: 186 APIVSDGFYKFVKKNRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFM 245
Query: 173 RVSIGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
RV+I IH +D++ +TY M+SQ +FTHA+PTLFNAGT QLSSCFL+ +KDD +
Sbjct: 246 RVAIAIHYRNNDLNRIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGA 304
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I + K+CA+ISK AGGIGV+V NIRA GSYI T GT++G+ +L VFN+ +RY +QGG
Sbjct: 305 IGDCWKDCAMISKYAGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG 363
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KR G+FA+Y+EPWHADI+ FL+LKKN G E RARDLF L + D+F+ERV+ +G WSL
Sbjct: 364 -KRAGSFAIYIEPWHADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSL 422
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDT 410
CP+E + +G EF + Y YE+ GK K + A++LWF+I+ +QIETG PY++FKD
Sbjct: 423 MCPSECPNIVGKYGTEFNEAYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDA 482
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
N KSNQ N+G I SNLC+EI+EY+S E A CNL+SI LPRF+ K+ E
Sbjct: 483 VNYKSNQINIGVINGSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE------- 535
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
FD++ L +V+ I+T NLN +ID+N+YPV+ R SN++HRPIG+GVQG+AD
Sbjct: 536 ---------FDYDMLRKVSGIMTRNLNNVIDINFYPVDKTRISNIKHRPIGVGVQGVADV 586
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW 590
F + F+S A+ LN+ IFETIY+ L+ S +++ + G YET+ SP+SKG Q D+W
Sbjct: 587 FAIFKTPFDSELARDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLW 646
Query: 591 NVIPSDR----WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 646
N + SD+ WDW L I K GVRNSL MPTASTSQI+G NEC EP+T NIYSR
Sbjct: 647 N-LSSDKLSGMWDWDSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSR 705
Query: 647 RVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIK 706
L+G++ V+NK+L+ DL ++G+W+ + + I Y GS+ KIP IP+ +K IY+TVWEI
Sbjct: 706 STLAGDYYVINKYLVQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIP 765
Query: 707 QMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADA 766
Q ++++MA +R +IDQ+QS+NI ++ P+F K+ S GLKTGMYYLRS+AA A
Sbjct: 766 QKSIIEMAAERAPFIDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSA 825
Query: 767 IKFTVDTSVFKEKPEKPELVVDD----------ETKMAQVVCS-LTNREECMACGS 811
+F +D KE + ++++ E K Q + L +C++C S
Sbjct: 826 DQFGIDIDKIKEIETRNNIILEKIENIEVDEPIELKPCQYIPKHLRKPGDCISCSS 881
>gi|363540886|ref|YP_004894644.1| mg593 gene product [Megavirus chiliensis]
gi|350612051|gb|AEQ33495.1| ribonucleoside-diphosphate reductase large subunit [Megavirus
chiliensis]
Length = 881
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/776 (46%), Positives = 519/776 (66%), Gaps = 41/776 (5%)
Query: 56 LDELAAETAAA---MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLK 112
LD++ + A+ M +H +Y +A I ++NLH++T + + +++N+ N ++G+
Sbjct: 127 LDDIQNQIIASSSEMMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNIN-KNGIH 185
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
AP+++D Y+ + KN ++ I Y D+ + FGF+TLE+SYL KV+G ++ERPQH+ M
Sbjct: 186 APIVSDGFYKFVKKNRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFM 245
Query: 173 RVSIGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
RV+I IH +D++ +TY M+SQ +FTHA+PTLFNAGT QLSSCFL+ +KDD +
Sbjct: 246 RVAIAIHYRNNDLNRIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGA 304
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I + K+CA+ISK AGGIGV+V NIRA GSYI T GT++G+ +L VFN+ +RY +QGG
Sbjct: 305 IGDCWKDCAMISKYAGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG 363
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KR G+FA+Y+EPWHADI+ FL+LKKN G E RARDLF L + D+F+ERV+ +G WSL
Sbjct: 364 -KRAGSFAIYIEPWHADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSL 422
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDT 410
CP+E + +G EF + Y YE+ GK K + A++LWF+I+ +QIETG PY++FKD
Sbjct: 423 MCPSECPNIVGKYGTEFNETYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDA 482
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
N KSNQ N+G I SNLC+EI+EY+S E A CNL+SI LPRF+ K+ E
Sbjct: 483 VNYKSNQINVGVINGSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE------- 535
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
FD++ L +V+ I+T NLN +ID+N+YPV+ R SN++HRPIG+GVQG+AD
Sbjct: 536 ---------FDYDMLRKVSGIMTRNLNNVIDINFYPVDKTRVSNIKHRPIGVGVQGVADV 586
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW 590
F + F+S A+ LN+ IFETIY+ L+ S +++ + G YET+ SP+SKG Q D+W
Sbjct: 587 FAIFKTPFDSELARDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLW 646
Query: 591 NVIPSDR----WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 646
N + SD+ WDW L I K GVRNSL MPTASTSQI+G NEC EP+T NIYSR
Sbjct: 647 N-LSSDKLSGMWDWDSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSR 705
Query: 647 RVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIK 706
L+G++ V+NK+L+ DL ++G+W+ + + I Y GS+ KIP IP+ +K IY+TVWEI
Sbjct: 706 STLAGDYYVINKYLVQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIP 765
Query: 707 QMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADA 766
Q ++++MA +R +IDQ+QS+NI ++ P+F K+ S GLKTGMYYLRS+AA A
Sbjct: 766 QKSIIEMAAERAPFIDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSA 825
Query: 767 IKFTVDTSVFKEKPEKPELVVDD----------ETKMAQVVCS-LTNREECMACGS 811
+F +D KE + ++++ E K Q + L +C++C S
Sbjct: 826 DQFGIDIDKIKEIETRNNIILEKIENIEVDEPIELKPCQYIPKHLRKPGDCISCSS 881
>gi|451927339|gb|AGF85217.1| reductase large subunit [Moumouvirus goulette]
Length = 847
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/722 (48%), Positives = 492/722 (68%), Gaps = 27/722 (3%)
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
++ M +H DY A I ++NLH+NT + + + + M + NE +G+ AP+++ + Y+
Sbjct: 103 SSTEMLADHYDYPKTAVYILINNLHENTHEDYFKVVSIMRRNINE-NGIHAPIVSKNFYK 161
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH--K 180
+ KN ++ + Y+RD+D FG++TLERSYL K G ++ERPQH+ MRV+I +H
Sbjct: 162 FVQKNYKKINEQFKYERDYDMSIFGYRTLERSYLKKCNGVIIERPQHLWMRVAITLHYRT 221
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
D+ +TY M+S+ +FTHA+PTLFN+GTP QLSSCFL+ +KDD + + ++ K+CA+
Sbjct: 222 GDLSKIFETYEMLSEGYFTHATPTLFNSGTPFEQLSSCFLMGVKDD-MASLGDSWKDCAI 280
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK +GGIG+++ N+R G+YI T GTSNG+ +L ++ND ARY +QGG KR G+FA++
Sbjct: 281 ISKFSGGIGINMSNVRVEGAYINSTQGTSNGL-RVLSIYNDIARYANQGG-KRAGSFAIF 338
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
+EPWH DIF FL+LKKN G E R RDLF L + ++FM+RV+ + +WSL CP++ +
Sbjct: 339 IEPWHGDIFFFLDLKKNTGAETERTRDLFLGLMINNIFMDRVEKDEKWSLMCPSQCPDIV 398
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+G EF K Y YE EGK K ++A+ LWF+I+ +QIETG PY+L+KD N KSNQ N+
Sbjct: 399 GKYGEEFNKAYLKYETEGKFTKQIKARELWFKIMETQIETGVPYILYKDAINEKSNQINI 458
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRF-VREKDVPVESHPSRIVGSRGSKNRF 479
G I SNLCTEI+EY+S E AVCNL+SI LP+F + + D P
Sbjct: 459 GVINGSNLCTEIVEYSSADEYAVCNLSSICLPKFIIHDNDSPK----------------- 501
Query: 480 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFE 539
FD++KL ++ I+T NLN IID+NYYPV+ SNLRHRPIGIGVQGLAD F L F+
Sbjct: 502 FDYDKLYKIARIITRNLNNIIDINYYPVDKTLVSNLRHRPIGIGVQGLADVFALFKTPFD 561
Query: 540 SPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP---SD 596
S A+ LN+ IFETIY+ A+ S ++A + GPYET+ SP+SKG Q D+WN+ S
Sbjct: 562 SDIARDLNRKIFETIYFGAMTESLQMAKEFGPYETFWGSPLSKGKFQFDLWNISANKLSG 621
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
WDW LR I +GVRNSL MPTASTSQI G NEC EP+T NIYSR L+G++ V+
Sbjct: 622 MWDWETLRKEIMIHGVRNSLTTTCMPTASTSQIKGYNECIEPFTENIYSRSTLAGDYYVI 681
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
NK+L+ DL E+G+W+ + + I Y GS+ I IP+ +K IY+TVWEI Q ++++MA D
Sbjct: 682 NKYLIQDLMELGLWNSDMVDLIKYYQGSIANISTIPQNIKEIYRTVWEIPQKSIIEMAAD 741
Query: 717 RGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
R ++DQ+QS+NI +++P+F K+ S F + GLKTGMYYLR + A+ A +F +D
Sbjct: 742 RAPFVDQTQSMNIFIEKPDFIKLNSCLFYAYRLGLKTGMYYLRGKPASSANQFGIDIEKI 801
Query: 777 KE 778
KE
Sbjct: 802 KE 803
>gi|155370864|ref|YP_001426398.1| hypothetical protein FR483_N766L [Paramecium bursaria Chlorella
virus FR483]
gi|155124184|gb|ABT16051.1| hypothetical protein FR483_N766L [Paramecium bursaria Chlorella
virus FR483]
Length = 765
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/788 (48%), Positives = 524/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KRDG EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRDGSTEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS T+KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSETMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT +YY+RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448925405|gb|AGE48985.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus AP110A]
Length = 765
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/788 (48%), Positives = 524/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KRDG EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ + I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNFVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W+V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWSVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS T+KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSETMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT +YY+RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448928435|gb|AGE52006.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVM-1]
Length = 765
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/788 (48%), Positives = 523/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KRDG EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT +YY+RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448927093|gb|AGE50668.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVA-1]
gi|448928776|gb|AGE52346.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVR-1]
Length = 765
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/788 (48%), Positives = 523/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KRDG EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRDGSTEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLETRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT +YY+RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448927759|gb|AGE51332.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVG-1]
Length = 765
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/788 (48%), Positives = 523/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KRDG EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLETRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT +YY+RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448934617|gb|AGE58170.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NW665.2]
Length = 765
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/788 (48%), Positives = 522/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KRDG EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVHTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS T+KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSETMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS N+ + P K +TS+ F W +GLKT +YY RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|155122463|gb|ABT14331.1| hypothetical protein MT325_M777L [Paramecium bursaria chlorella
virus MT325]
Length = 765
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/788 (48%), Positives = 525/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KR+G EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRNGSSEAVSFDKIMTRISRLCWPENGKPTHRGSRAQNGLAVDISRIVANICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y+
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYSKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ + + I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVRTHGDQYQAFIDYDRDFDFDYFGFATMQRLYLTKVGSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+Q+ETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQMETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT +YY RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448929790|gb|AGE53357.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus Fr5L]
Length = 765
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/788 (48%), Positives = 521/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KRDG EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVHTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVDSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS +KN+II + GSVQK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSVQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS N+ + P K +TS+ F W +GLKT +YY RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448926428|gb|AGE50005.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus Can18-4]
Length = 765
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/788 (48%), Positives = 524/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KR+G EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRNGSSEAVSFDKIMTRISRLCWPENGKPTHRGSRAQNGLAVDISRIVANICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y+
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYSKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ + I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVRTYGDQYQAFIDYDRDFDFDYFGFATMQRLYLTKVGSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+Q+ETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYETEGKAKRVVKARDVWNTMVTTQMETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT +YY RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|310831538|ref|YP_003970181.1| putative ribonucleotide reductase large subunit [Cafeteria
roenbergensis virus BV-PW1]
Length = 922
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/927 (43%), Positives = 544/927 (58%), Gaps = 151/927 (16%)
Query: 2 YVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
YV+KRDGR+E VHFDKIT R+ KL G ++ D + + +K +Y G+TT +LD +A
Sbjct: 17 YVIKRDGRRENVHFDKITQRISKLLTGNMNKNIDIINIVKKTITSIYPGITTKELDNQSA 76
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIY 121
MT H DYA LA RI VS+LHK T K+F E K LI D+++
Sbjct: 77 YQCGMMTPLHYDYALLAGRIYVSSLHKETMKTFVE---------------KMELINDNLH 121
Query: 122 -------EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
E I K+ L+ I Y+RD+ +D+FG KT+ER+Y+ K+ G ++ERPQ + MRV
Sbjct: 122 IYDSEWIEFIKKHRNKLNKIIDYNRDYSFDFFGIKTMERTYITKLDGHLIERPQDVFMRV 181
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ +H D+ I +Y++MS+++FTHASPTLFNAG + L SCFL+ +DS+ GI +T
Sbjct: 182 ASLVHCGDLQKTIDSYNLMSKKYFTHASPTLFNAGNKKGNLVSCFLLGT-EDSMTGISKT 240
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A ISK GGIG+ + N+RA GS I+ TNG S+GIVPML+V+N RYV+Q G +RK
Sbjct: 241 WNDVAHISKWGGGIGIHISNVRAKGSEIKSTNGHSDGIVPMLQVYNSICRYVNQSG-RRK 299
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
G+FA YLEP HADIF+FL L+KN G E RARDLF ALWV DLFM +V+ N W LFCP+
Sbjct: 300 GSFAFYLEPHHADIFDFLELRKNTGAESERARDLFLALWVSDLFMNQVKLNNDWYLFCPD 359
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
+A GL D +G E+E LY Y E K K ++A+ LW I+T+Q ETG+PYML+KD N+K
Sbjct: 360 KAPGLNDVYGDEYETLYWKYVSEEKYNKKIKARKLWEAIMTAQFETGSPYMLYKDNINKK 419
Query: 415 SNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVP-----VESHPSRI 469
SNQ+N+G I+SSNLC EI+EY+ TETA CNLASIALP F++ K+V V S P+ I
Sbjct: 420 SNQKNIGIIRSSNLCAEIVEYSDSTETAACNLASIALPNFIKSKNVSDNGWIVYSKPNCI 479
Query: 470 VGS-----RGSKNRFFDFEKLAEVTAIVTENLNK-------------------------- 498
+KN F+ EKL E+ ++ NL +
Sbjct: 480 YCKWIKQMLINKNIKFE-EKLIEIDSVELYNLKQKIGKELITFPQVFLNNTLIGGMEETW 538
Query: 499 -------------------------IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
+ID NYYP + +RRSN+RHRPIG+G+QGLADT L
Sbjct: 539 IYFGKDYDYEKLWNVAYHVTQNLDSVIDKNYYPTKESRRSNMRHRPIGLGIQGLADTLAL 598
Query: 534 LGMAFESPEAQQLNKDIFETIYYHALKTSSEIAA-------------------------- 567
L + + S A +N+ IF IY+ A+ S +IA
Sbjct: 599 LRVPYASKAALDINEKIFGIIYHAAVTASVDIAKEREEDMKLLLKYFEEHPKKKPSSEFY 658
Query: 568 ----------------KEGPYET-------------YHNSPVSKGILQPDMWNVIP---- 594
K P+ T + SP S+G LQ +WN P
Sbjct: 659 DDNFECYPKKIEKIYHKLRPHSTELDKTQFLGAYSTFEGSPFSEGKLQYHLWNRTPINIS 718
Query: 595 --SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+ W L + + K G RNSLL A MPTASTSQ+LGN E FEP+TSNIY+RR L+GE
Sbjct: 719 TLIEGKSWDSLINEMKKYGTRNSLLTALMPTASTSQLLGNYESFEPFTSNIYTRRTLAGE 778
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+VVNKHL++DL E+G W+ I+ K+I D+GS+Q I +P +K IY+T +E+KQ ++D
Sbjct: 779 FIVVNKHLINDLNEIGEWTNEIRQKVINDNGSIQNIL-LPNIIKNIYQTSYEMKQKYIID 837
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
RG YIDQ+QS+N++ QP+ +K+TS F W +GLKTG+YYLRS+ +A+A K TV
Sbjct: 838 GCSIRGAYIDQTQSMNLYFAQPDSQKLTSSQFYAWEQGLKTGLYYLRSKPSANATKITVL 897
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCS 799
+ + K ++ +DE V+CS
Sbjct: 898 LNNSQNKINSQNMMEEDE---GCVMCS 921
>gi|448935705|gb|AGE59255.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus OR0704.2.2]
Length = 765
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/788 (48%), Positives = 522/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KRDG E V FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRDGSAEPVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y+
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYSKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ + I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVRTYGDKYQAFIDYDRDFDFDYFGFSTMQRLYLTKVDSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKG++Q
Sbjct: 515 QDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGVMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS +KN+II + GSVQK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSVQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS N+ + P K +TS+ F W +GLKT +YY RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448927432|gb|AGE51006.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVB-1]
Length = 765
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/788 (48%), Positives = 522/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KRDG EAV FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRDGSTEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYAKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLESRVQK-GVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L WS +KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARETWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS+N+ + P K +TS+ F W +GLKT +YY+RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448929444|gb|AGE53012.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CZ-2]
Length = 765
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/788 (48%), Positives = 522/788 (66%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY---------GLSTEHCDPVLVSQ---KVCAGVY 48
M V+KR+G E V FDKI R+ +L + G ++ V +S+ +CA +
Sbjct: 9 MNVIKRNGSAEPVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAVDISRIVASICASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT QLD+L A+ AA++TT +PDY LAARIA+SNL K T S++I D Y+
Sbjct: 69 DNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYSKLEH- 123
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
L++D+ ++ + I YDRDFD+DYFGF T++R YL KV K++ERPQ
Sbjct: 124 ------LLSDEFMNLVRTYGDKYQAFIDYDRDFDFDYFGFSTMQRLYLTKVDSKIIERPQ 177
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + DI+ +TY +S+R FTHASPTLFNAG + L+SCFLV C +DS
Sbjct: 178 HTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC--NDS 235
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+ Y +
Sbjct: 236 LTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSAYAN 295
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G+E RAR+LFYA+WV DLFM+RV+T+ Q
Sbjct: 296 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVETDAQ 354
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL+D +G E+E+LYT YE EGKAK+VV+A+++W ++T+QIETG PY+L
Sbjct: 355 WSLLDPHECPGLSDVYGKEYEELYTKYETEGKAKRVVKARDVWNTMVTTQIETGMPYVLN 414
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS ETAVC + SI L +V
Sbjct: 415 KDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV------------ 462
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GVQGL
Sbjct: 463 --------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGVQGL 514
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S +A++LN++IFE IY+ A++ S E++ + GP+ T+ SP SKGI+Q
Sbjct: 515 QDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGIMQY 574
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 575 HLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIYSRR 633
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++K +YKT WEI
Sbjct: 634 TLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWEISM 693
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
T++D+A DRG ++DQ+QS N+ + P K +TS+ F W +GLKT +YY RS+ AA+AI
Sbjct: 694 KTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAANAI 753
Query: 768 KFTVDTSV 775
TVD +
Sbjct: 754 AVTVDECI 761
>gi|448932906|gb|AGE56464.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NE-JV-1]
Length = 764
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/788 (48%), Positives = 516/788 (65%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSY--GLSTEH----------CDPVLVSQKVCAGVY 48
M V+KRDG EAV FDKI R+ +L + G H D + VC+ +
Sbjct: 8 MNVIKRDGSTEAVSFDKIMTRIGRLCWPEGGKPTHRGSRIQSGLDVDISRIVGSVCSSIV 67
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT +LDEL A+ AA++TT +PDY LAARIAVSNL K T S +T ++M
Sbjct: 68 DNITTVKLDELTADKAASLTTLNPDYGILAARIAVSNLQKQTTDSVVDTFEEM------- 120
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
+ L++DD + + S + YDRDFD+DYFGF T++R YL KV K+VERPQ
Sbjct: 121 ----SHLLSDDFLKNVRTYGDVYQSIVDYDRDFDFDYFGFSTMQRLYLTKVGSKIVERPQ 176
Query: 169 HMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLV-CMKDDS 227
H +RV+I + +I+ +TY +S+R FTHASPTLFNAG + L+SCFLV C DDS
Sbjct: 177 HTYLRVAIALWGSNIERVKETYDALSRRKFTHASPTLFNAGFKKSNLASCFLVHC--DDS 234
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I++ L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+VF+ T+ Y +
Sbjct: 235 LSDIFKCLGDVAQLSKYGGGIGLHLSDIRGRGSAIKGTNGESDGIVPMLKVFDATSAYAN 294
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG +RKG+FAVYLEP H DI +FL L++N G E RAR+LFYA+W+ DLFM RV+ + Q
Sbjct: 295 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGDESLRARNLFYAVWLNDLFMRRVEADAQ 353
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
WSL P+E GL + +G E+E LY YE EGKA KVV+A+++W ++T+QIETG PY+
Sbjct: 354 WSLLDPHECPGLTEAFGKEYEDLYVRYESEGKAVKVVKARDVWNSMVTTQIETGMPYVAN 413
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD+ N K+ Q N GTIK SNLC EI+EYTS E AVC + SI L +V
Sbjct: 414 KDSVNAKNMQANAGTIKGSNLCCEILEYTSSEEIAVCVIGSIVLKNYV------------ 461
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDF+ L + I+ +NL++ IDV Y VE AR SN+R RPIG+GVQGL
Sbjct: 462 --------KNGKFDFDDLRKHVKILAKNLDRSIDVMSYAVEEARVSNMRRRPIGVGVQGL 513
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D F L M F+S A+ LN+DIFE IY+ A++ S E+A + GP+ T+ SP SKG++Q
Sbjct: 514 QDVFFKLKMPFDSEAARDLNRDIFEHIYFAAVEASCELADELGPHPTFEGSPASKGVMQY 573
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+W V P DW L + + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 574 HLWGVTPQTALDWSGLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNIYSRR 632
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS ++K++II + GS+Q++ I ++K +YKT WE+
Sbjct: 633 TLAGEFPVVNSYLVRELINRGTWSESMKDQIIANGGSIQRVIGIHPDVKAVYKTSWELSM 692
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
+++DMA DRG ++DQ+QS+N+ + P K VTS+ F W +GLKT +YYLRS+ AA+AI
Sbjct: 693 KSVIDMAADRGAFVDQTQSMNLFLASPTLKSVTSMLFYGWKKGLKTMLYYLRSKPAANAI 752
Query: 768 KFTVDTSV 775
+ TVD +
Sbjct: 753 QVTVDECI 760
>gi|307205346|gb|EFN83694.1| Ribonucleoside-diphosphate reductase large subunit [Harpegnathos
saltator]
Length = 701
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/710 (50%), Positives = 477/710 (67%), Gaps = 21/710 (2%)
Query: 51 VTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSG 110
+TT +LD LAA+ AA+M H DY LA RIA+SNLHK TKK FSE I +Y+
Sbjct: 1 MTTVELDTLAADIAASMVNQHMDYEILAGRIAISNLHKETKKVFSEVITQLYHGNLSIMN 60
Query: 111 LKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHM 170
+ P I++ Y II ++A L+S IIYDRDF+Y Y FK LE +LL++ GKVVERPQHM
Sbjct: 61 RRLPRISEKYYTIIQEHADRLNSAIIYDRDFNYSYTAFKILENKHLLRLNGKVVERPQHM 120
Query: 171 LMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
LMRV++ IH DD+D+AI+TY+++S+++ HA+ TL +A T + Q++S FL+ M +DSI+G
Sbjct: 121 LMRVAVSIHNDDVDNAIETYNLLSKQYIVHAAQTLNSACTVKQQMASSFLLTMSEDSIDG 180
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I ++L+ AV+ G IG +VH IRA + IRGT G SNG+VPMLR +N + V +
Sbjct: 181 ILDSLERVAVLCHHNGDIGFNVHCIRAKNTPIRGTGGVSNGLVPMLRAYNTSIPTVCRKN 240
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
+G VYLEPWH+DI++FL LK++ G E+ RA+D+FYALW PD+FM RV + WSL
Sbjct: 241 --IEGPITVYLEPWHSDIYQFLELKRDIGDEQLRAKDMFYALWTPDIFMRRVFDDADWSL 298
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDT 410
CP+E GL D WG EFE LY YE E + +K V+A++LW I QI+TGTPY+++KD
Sbjct: 299 MCPHECPGLIDVWGDEFEALYIRYEEENRYRKQVKARDLWVFITQLQIQTGTPYIVYKDH 358
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
CN KSNQQNLGTI + TE+I+Y++ E A C+LA+IA+ FV
Sbjct: 359 CNLKSNQQNLGTINCGSFSTEVIQYSASDEIAACHLATIAVDMFV--------------- 403
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
S + +DF KL +V IVT NL+K+IDVN YP+E S R R IGI GLAD
Sbjct: 404 ---NSTTKTYDFSKLKKVVKIVTYNLDKMIDVNLYPLEEVTFSAYRQRAIGISASGLADA 460
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW 590
FIL+ FES EA++LN IFET YY AL+ S E+A ++GPY TY SPVSKGILQ +MW
Sbjct: 461 FILMRYPFESKEAKKLNVQIFETFYYGALEASCEMAIEDGPYATYEGSPVSKGILQYEMW 520
Query: 591 NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLS 650
N P+D WDW L+ I+K GVRNSLL+A +Q+LGNNE PYTSNI + S
Sbjct: 521 NAKPTDLWDWDTLKAKIAKYGVRNSLLIAQTSDTFMAQMLGNNESVGPYTSNICTMHASS 580
Query: 651 GEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTL 710
F V KHLL DL E G+WS + NKII + GS+Q I +IP++LK++YKT WE+ Q +
Sbjct: 581 KLFPYVKKHLLRDLIEKGLWSEDMCNKIISNGGSIQDIDDIPDDLKLLYKTAWEMPQKRI 640
Query: 711 VDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRS 760
+MA RG +IDQSQ LN+HM P+ K+TS+HF W GLK+ MY+ ++
Sbjct: 641 FEMAAARGPFIDQSQCLNVHMKDPS-DKLTSMHFYAWEIGLKSSMYHFKT 689
>gi|269859792|ref|XP_002649620.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
gi|220066983|gb|EED44452.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
Length = 769
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/771 (45%), Positives = 500/771 (64%), Gaps = 43/771 (5%)
Query: 41 QKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKD 100
++V +G+ +T ++ + +E AA+M T HP+Y LA+ I + LH +T ++FSE
Sbjct: 35 KQVSSGLAMEMTCEEMSKYCSEVAASMITLHPNYNKLASVILIKYLHCSTHENFSERFLL 94
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
+++ N + +DI +++ + D I D+ +DYFG TL ++YL K+
Sbjct: 95 LHSELN--------IFDEDIVQLVKLHRKYYDDIIDSTNDYLFDYFGLITLFKTYLNKIN 146
Query: 161 GKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL 220
+VERPQ + M+V+I +H+ + D TY ++S ++TH +PTL+N+ +PQ++SCFL
Sbjct: 147 NSIVERPQDIYMKVAIQLHRSNFDDVKTTYELLSNFYYTHGTPTLYNSCLKKPQMASCFL 206
Query: 221 VCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 280
+ MKDDS+EGI+ET+K+CA I K GGIG+ + NIR S I T G + GI+P++R+ +
Sbjct: 207 LAMKDDSVEGIFETIKDCASIRKFNGGIGMYLTNIRPNKSKINSTGGEAKGIIPVIRLIS 266
Query: 281 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFME 340
+T +Y ++ KR + A YLEPWH DIF+FLNL+KN G E+ RARD F L++ D+FME
Sbjct: 267 ETIKYFNKNETKRSTSCAFYLEPWHPDIFDFLNLRKNTGPEDMRARDAFIGLFINDIFME 326
Query: 341 RVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIET 400
RVQ N WSLF P+ A+GL + WG EF KLY +YE+ K + AQ LW EI+ +QIET
Sbjct: 327 RVQNNENWSLFDPSIATGLINAWGDEFNKLYEYYEK-TIPKITIPAQKLWKEIICAQIET 385
Query: 401 GTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDV 460
GTPY+++KD+CNR SNQ NLGTIKSSNLC EIIEY+ T VCNLASI LP+F+ +
Sbjct: 386 GTPYLVYKDSCNRNSNQNNLGTIKSSNLCAEIIEYSDANITGVCNLASICLPKFINNANQ 445
Query: 461 PVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
FDF++L +V VT NLNK+ID+++YP + A+ SN RPI
Sbjct: 446 -------------------FDFKQLYQVMKKVTINLNKLIDISFYPTKEAKYSNEATRPI 486
Query: 521 GIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPV 580
GIGVQGLAD + + FES +A++LN+ IFET+YY ++TS E+A GPY NS
Sbjct: 487 GIGVQGLADALCKMRIPFESSQAKELNRMIFETMYYSVMETSMELAKTYGPYPLITNSMY 546
Query: 581 SKGILQPDMW----NV-IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
SKGI + + N+ I S WDW LR+ I GVRNSL ++ MPTA+T+QI GN+EC
Sbjct: 547 SKGIFHFEKYLKNKNIDILSGLWDWEDLREKIRLYGVRNSLTLSIMPTATTAQICGNSEC 606
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP TSNIY+RR GEF +VNK+L++DL ++G+WS +K II +GS+Q IP IP +
Sbjct: 607 VEPITSNIYTRRTFVGEFQIVNKYLMNDLIKLGLWSNEMKQLIIEYNGSIQNIPTIPSNI 666
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
K +YKTVWEIK ++DMA +R ++DQSQSLN+ + QP + ++S+HF W GLKTG+
Sbjct: 667 KNLYKTVWEIKMKCILDMAHERQAFVDQSQSLNLFISQPTYAILSSMHFYGWKLGLKTGI 726
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREEC 806
YYLR+ A AIKFT+D EL++ + M C N +EC
Sbjct: 727 YYLRTSPIASAIKFTID----------KELIIRTLSSMKNDECEPPNCKEC 767
>gi|154278713|ref|XP_001540170.1| ribonucleoside-diphosphate reductase large subunit [Ajellomyces
capsulatus NAm1]
gi|150413755|gb|EDN09138.1| ribonucleoside-diphosphate reductase large subunit [Ajellomyces
capsulatus NAm1]
Length = 508
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/455 (70%), Positives = 386/455 (84%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MT HPDYA+LAARIAVSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYATLAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQTT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
YE +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+PQ++SCFL+ MK+DSIEGIY+TLK CA+
Sbjct: 181 DDVERVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+L+KNHGKEE RARDLF ALW PDLFM+RV+ NG+W+LFCPNEA GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFE LY YE+EG+ KK V+AQ LW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
GTI+SSNLCTEIIEY SP E AVCNLASIALP FV
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFV 455
>gi|281339148|gb|EFB14732.1| hypothetical protein PANDA_021921 [Ailuropoda melanoleuca]
Length = 500
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/519 (63%), Positives = 403/519 (77%), Gaps = 19/519 (3%)
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
R GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL C
Sbjct: 1 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 60
Query: 353 PNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCN 412
PNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CN
Sbjct: 61 PNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 120
Query: 413 RKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
RKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +V
Sbjct: 121 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASVALNMYV----------------- 163
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ +DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FI
Sbjct: 164 --TSEHTYDFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFI 221
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L+ FESPEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVS+GILQ DMWNV
Sbjct: 222 LMRYPFESPEAQLLNKQIFETIYYGALEASCDLAREHGPYETYEGSPVSRGILQYDMWNV 281
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D WDW +L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGE
Sbjct: 282 TPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGE 341
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F +VN HLL DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++
Sbjct: 342 FQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLK 401
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++
Sbjct: 402 MAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 461
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
K+K + + + E A +VCSL NREEC+ CGS
Sbjct: 462 KEKLKDKEKATKEEEEKERNTAAMVCSLENREECLMCGS 500
>gi|350588224|ref|XP_003129661.3| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Sus scrofa]
Length = 634
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/522 (64%), Positives = 401/522 (76%), Gaps = 26/522 (4%)
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
R GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL C
Sbjct: 136 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 195
Query: 353 PNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCN 412
PNE GL + WG EFEKLY YER+G +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CN
Sbjct: 196 PNECPGLDEVWGEEFEKLYESYERQGHVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 255
Query: 413 RKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
RKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +V
Sbjct: 256 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV----------------- 298
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ +DF KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FI
Sbjct: 299 --TSEHTYDFTKLAEVTKVIVRNLNKIIDINYYPIPEASLSNKRHRPIGIGVQGLADAFI 356
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L+ FESPEAQ LNK IFETIYY AL+ S ++A + GPYETY SPVSKGILQ DMWNV
Sbjct: 357 LMRYPFESPEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNV 416
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D WDW +L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGE
Sbjct: 417 TPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGE 476
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F +VN HLL DLTE G+W+ +KN+II +GS+Q IPEIP++LK +YKTVWEI Q T++
Sbjct: 477 FQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLK 536
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++
Sbjct: 537 MAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 596
Query: 773 TSVFKEK---PEKPELVVDDETKMAQVVCSLTNREECMACGS 811
KEK EK + E A +VCSL NR+EC+ CGS
Sbjct: 597 ----KEKLKDKEKVSKEEEKERNTAAMVCSLENRDECLMCGS 634
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 110/160 (68%), Gaps = 6/160 (3%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVARST 120
Query: 121 YEIIMKNA-ACL-----DSEIIYDRDFDYDYFGFKTLERS 154
+I++ N C+ + IY + D F F L+++
Sbjct: 121 LDIVLANKDVCIMLFRPGAFAIYLEPWHLDIFEFLDLKKN 160
>gi|385303449|gb|EIF47522.1| ribonucleoside-diphosphate reductase large chain 1 [Dekkera
bruxellensis AWRI1499]
Length = 466
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/455 (68%), Positives = 387/455 (85%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV KRD R+E V FDKITAR+ ++ YGL DPV V+Q+V GVY GVTT +LD L
Sbjct: 1 MYVFKRDXRREPVRFDKITARISRMCYGLDEXRIDPVAVAQRVVTGVYPGVTTIELDNLT 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA MTT HPDYA+LAAR+A+SNLHK TKK FS+ I+D+YN+YN ++ K+P+I++++
Sbjct: 61 AETAAYMTTIHPDYATLAARLAISNLHKQTKKPFSDVIEDLYNYYNPKTQKKSPMISEEV 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y+I+MK+ L+S I YDRDF Y+YFGFKTLERSYLL++ GKV ERPQH+LMRV++GIH
Sbjct: 121 YKIVMKHKDELNSAINYDRDFSYNYFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DDI +++Y +MS+R+FTHASPTLFNAGTPRPQ+SSCFLV MKDDSIEGIY+TLK+CA+
Sbjct: 181 DDIPKVLESYDLMSKRYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RVFN TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVFNSTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADIF+F++++KNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF P+EA GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNDTWTLFSPSEAPGLS 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EFEKLYT YE+EG+ ++ V+AQ LW++IL +Q ETGTP+M++KD CNRKSNQ+NL
Sbjct: 361 DVYGDEFEKLYTRYEKEGRGRRTVKAQKLWYQILEAQTETGTPFMIYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
GTIKSSNLC E++EY+SP E VCNLA+I LP FV
Sbjct: 421 GTIKSSNLCCEVVEYSSPDEVGVCNLANICLPAFV 455
>gi|349605784|gb|AEQ00901.1| Ribonucleoside-diphosphate reductase large subunit-like protein,
partial [Equus caballus]
Length = 492
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/511 (63%), Positives = 395/511 (77%), Gaps = 19/511 (3%)
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLF +RV++N WSL CPNE GL
Sbjct: 1 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFKKRVESNQDWSLMCPNECPGLD 60
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 61 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 120
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
GTIK SNLCTEI+EYTS E AVCNLAS+AL FV + +
Sbjct: 121 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TSEHTY 161
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ FES
Sbjct: 162 DFQKLAEVTKVIVRNLNKIIDINYYPIPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 221
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDW 600
PEAQ LNK IFETIYY AL+ S +++ ++GPYETY SPVSKGILQ DMWNV P+D WDW
Sbjct: 222 PEAQLLNKQIFETIYYGALEASCDLSKEDGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 281
Query: 601 GVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 282 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 341
Query: 661 LHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCY 720
L DLTE G+W+ +KN+II +GS+Q I EIP++LK +YKTVWEI Q T++ MA +RG +
Sbjct: 342 LKDLTERGLWNEEMKNQIIACNGSIQSIQEIPDDLKQLYKTVWEISQKTILKMAAERGAF 401
Query: 721 IDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K
Sbjct: 402 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 461
Query: 781 EKPELVVDDETKMAQVVCSLTNREECMACGS 811
+ + + E A +VCSL NR+EC+ CGS
Sbjct: 462 KASKEEEEKERNTAAMVCSLENRDECLMCGS 492
>gi|323450453|gb|EGB06334.1| hypothetical protein AURANDRAFT_54285 [Aureococcus anophagefferens]
Length = 555
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/473 (64%), Positives = 379/473 (80%), Gaps = 5/473 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR+G++E V +DKIT+R+KKL YG ++ P ++QKV GVY GVTT +LDELA
Sbjct: 7 MQVVKRNGKKETVRYDKITSRIKKLCYGFDAKYIKPNQITQKVIQGVYDGVTTHELDELA 66
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
A+T A M T HPD++ LAARI+VSNLHK+T K+FS+ ++ ++ H + ++ A LI+D+
Sbjct: 67 AQTTAYMATQHPDFSVLAARISVSNLHKSTDKTFSDVVEKLHKHVHPKTKKPAALISDET 126
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
Y + K+ +++ I+YDRDF+YDYFGFKTLERSYL+++ G + ERPQHM+MRV++GIH
Sbjct: 127 YATVQKHKDAINAAIVYDRDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DD+ A +TY MMSQ+ FTHA+PTLFNAGTPRPQLSSCFL+ MK+DSIEGIY+TLK CA
Sbjct: 187 DDLAGAFETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHNIRAT SYI G+NGTSNGIVPMLRV+NDTARYVDQGG +RKG+FA+Y
Sbjct: 247 ISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRVYNDTARYVDQGGRRRKGSFAIY 306
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWHADI +L+LKKNHG E RARDLFY LW+PDLFM+RV+ NG WSL CPNE GLA
Sbjct: 307 LEPWHADIEMWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGFWSLMCPNECPGLA 366
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
DC GA+FE LY YE EG A+K + AQ LWF IL SQ+ETGTPYML+KD CN KSNQ++L
Sbjct: 367 DCHGAKFEALYERYEAEGCARKAIPAQQLWFAILDSQVETGTPYMLYKDACNGKSNQKHL 426
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSR 473
GTIKSSNLCTEI+EYT+P E AVCNLASI L +V +H S+ +G R
Sbjct: 427 GTIKSSNLCTEIVEYTAPDEIAVCNLASINLG-----SEVSGATHNSKRLGRR 474
>gi|327287998|ref|XP_003228715.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Anolis carolinensis]
Length = 745
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/445 (70%), Positives = 373/445 (83%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+VVKRDGR E V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRHERVMFDKITSRIQKLCYGLNVDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+Y + N + +P+IA +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYTYVNPHNSKHSPMIAKET 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ KV ERPQHMLMRVS+GIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINSKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S++WFTHASPTLFNAGT RPQLSSCFL+CMKDDSIEGIY+TLK CA+
Sbjct: 181 NDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKHCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL
Sbjct: 301 LEPWHFDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
+ WG EFEKLY YE++G+ ++VV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIIEYTSPTETAVCN 445
GTIK SNLCTEI+EYTS E V N
Sbjct: 421 GTIKCSNLCTEIVEYTSNDEAEVSN 445
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/317 (61%), Positives = 244/317 (76%), Gaps = 11/317 (3%)
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
V Y + A SN RHRPIGIGVQGLAD FIL+ FESPEAQ LN+ IFETIYY AL+
Sbjct: 433 VEYTSNDEAEVSNKRHRPIGIGVQGLADAFILMRFPFESPEAQLLNQQIFETIYYAALEA 492
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S +A + GPYETY P+SKGILQ DMWNV+P+D WDW L++ I+K+GVRNSLLVAPM
Sbjct: 493 SCNLAKECGPYETYEGCPLSKGILQYDMWNVVPTDLWDWKALKEKIAKHGVRNSLLVAPM 552
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE G+W+ +KN+II
Sbjct: 553 PTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWNEEMKNQIIAC 612
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
+GS+Q IPEIP++LK++YKTVWEI Q T++ MA DRG +IDQSQSLNIH+ +PN+ K+TS
Sbjct: 613 NGSIQTIPEIPDDLKLLYKTVWEISQKTVLKMAADRGAFIDQSQSLNIHIAEPNYGKLTS 672
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKM-------A 794
+HF W +GLKTGMYYLR++ AA+ I+FT++ KEK K + + +E + A
Sbjct: 673 MHFYGWKQGLKTGMYYLRTKPAANPIQFTLN----KEKLNKEKSSIGEEEEEAKKERNKA 728
Query: 795 QVVCSLTNREECMACGS 811
+VCSL NR+EC+ CGS
Sbjct: 729 AMVCSLENRDECLMCGS 745
>gi|301792342|ref|XP_002931138.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like,
partial [Ailuropoda melanoleuca]
Length = 477
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/496 (63%), Positives = 382/496 (77%), Gaps = 19/496 (3%)
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYE 375
KN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPNE GL + WG EFEKLY YE
Sbjct: 1 KNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYE 60
Query: 376 REGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEY 435
++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EY
Sbjct: 61 KQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEY 120
Query: 436 TSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
TS E AVCNLAS+AL +V + +DF+KLAEVT ++ N
Sbjct: 121 TSKDEVAVCNLASVALNMYV-------------------TSEHTYDFKKLAEVTKVIVRN 161
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
LNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ FESPEAQ LNK IFETIY
Sbjct: 162 LNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLLNKQIFETIY 221
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNS 615
Y AL+ S ++A + GPYETY SPVS+GILQ DMWNV P+D WDW +L++ I+K G+RNS
Sbjct: 222 YGALEASCDLAREHGPYETYEGSPVSRGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNS 281
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIK 675
LL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE G+W+ +K
Sbjct: 282 LLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWNEEMK 341
Query: 676 NKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPN 735
N+II +GS+Q IPEIP++LK +YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN
Sbjct: 342 NQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPN 401
Query: 736 FKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQ 795
+ K+TS+HF W +GLKTGMYYLR+R AA+ I+FT++ K+K + + + E A
Sbjct: 402 YGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKATKEEEEKERNTAA 461
Query: 796 VVCSLTNREECMACGS 811
+VCSL NREEC+ CGS
Sbjct: 462 MVCSLENREECLMCGS 477
>gi|356927904|gb|AET42694.1| ribonucleoside diphosphate reductase [Emiliania huxleyi virus 202]
Length = 491
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/486 (63%), Positives = 374/486 (76%), Gaps = 20/486 (4%)
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GGGKRKGAFA+YLEP HADIFEFL L++N GKEE RARDLFYALW+ D FM+RV+ W
Sbjct: 16 GGGKRKGAFAMYLEPHHADIFEFLELRRNTGKEELRARDLFYALWISDHFMQRVEAGKDW 75
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
SLFCP+E GLAD WG ++ KLY YE +GKA+K + AQ LWF I+ SQIETGTPYML+K
Sbjct: 76 SLFCPHECPGLADVWGDDYVKLYEKYESDGKARKTIPAQKLWFAIMDSQIETGTPYMLYK 135
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D+CNRKSNQQ+LGTI+ SNLCTEIIEYT+ ETAVCNLASIALP FV++
Sbjct: 136 DSCNRKSNQQHLGTIQQSNLCTEIIEYTASDETAVCNLASIALPIFVKD----------- 184
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
GS FD ++L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLA
Sbjct: 185 -----GS----FDHQELYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLA 235
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D F++L MAF+S EA+ LNK+IFET+Y+ A+ S ++A +G Y TY SP+SKG+ Q D
Sbjct: 236 DVFMMLKMAFDSIEARVLNKEIFETMYFAAMTASCDLAKTKGKYPTYEGSPLSKGVFQFD 295
Query: 589 MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
MWNV PSDRWDW LR I ++G RNSLL++PMPTAST+QILGNNEC EP+TSN+YSRRV
Sbjct: 296 MWNVTPSDRWDWDTLRGNIKEHGARNSLLISPMPTASTAQILGNNECMEPFTSNLYSRRV 355
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
LSGEF VVN+HL+ DL+E+G+W+ +KN II +GSVQ IP PE+LK IYKTVWEI
Sbjct: 356 LSGEFAVVNRHLVKDLSELGLWNDKMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMR 415
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
TL+ MA DRG +I QSQS N+ M P K+TS+HF W GLKTG YY+RSR AADAIK
Sbjct: 416 TLIHMAADRGAFICQSQSFNVFMTAPTSAKLTSMHFYGWKSGLKTGSYYIRSRPAADAIK 475
Query: 769 FTVDTS 774
FTVDTS
Sbjct: 476 FTVDTS 481
>gi|405354038|ref|ZP_11023447.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Chondromyces apiculatus DSM 436]
gi|397092729|gb|EJJ23478.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 837
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/817 (41%), Positives = 491/817 (60%), Gaps = 41/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL D + V+ K +G+Y G TT +LD L+
Sbjct: 53 MRVRKRNGGAETVDLNKIVRAVGRSCAGLP--RVDAMRVATKTISGLYDGATTRELDSLS 110
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+Y L+AR+ + + K SFS++I +G K LI
Sbjct: 111 IQTAAALIVEEPEYGRLSARLLATFIQKEVSNQDIHSFSQSIA---------AGHKHGLI 161
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + + NA L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 162 ADRLLQFVQANARKLNAAIDPTRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 221
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + D+++ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY+
Sbjct: 222 ASALSGDNVNEAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 281
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 282 YSDIAMLSKFSGGIGVAYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 340
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L++N G + R +L A WVPDLFM+RV+ +G WSLF P
Sbjct: 341 GACCVYLETWHADIEDFLELRENTGDDARRTHNLNLANWVPDLFMKRVEADGDWSLFDPK 400
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE+ Y E +G A + V+A++L+ ++ S +TG +M FKD NRK
Sbjct: 401 TVPHFTDLYGDAFEQAYAKAEADGLAMRKVKARDLYARMMKSLAQTGNGWMTFKDISNRK 460
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ ++ I SNLCTEI+E TS ETAVCNL S+ L R V++
Sbjct: 461 SNQTGKDGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLGRMVKDGK------------- 507
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFE+L + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 508 -------FDFERLRANAQLAMRQLDRVIDLNYYPIPTAASSNQRWRPVGLGLMGLQDVFF 560
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L +AF++PEA++L+K I E IY+ AL TS E+A + G + ++ + +KG LQ D W V
Sbjct: 561 QLKLAFDAPEARELSKQISEEIYFAALTTSCEMAEQYGAHTSFPETRAAKGELQFDHWGV 620
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P+D W LR I K+G+RNSL++A PTA+ + I+G EC EP SN++ R LSG+
Sbjct: 621 VPTDMARWDALRQRIMKHGLRNSLMIAIAPTATIASIVGCYECIEPQVSNLFKRETLSGD 680
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ DL +G+W+ ++N+I +GSVQ I E+PE L+ +Y+T WE+ +L+D
Sbjct: 681 FLQVNRYLVRDLQALGLWNENVRNRIKMAEGSVQDITELPENLRAVYRTAWELPMRSLLD 740
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
M DRG +IDQSQSLN+ ++ PN K++S++F W +GLKT YYLRSR A K TV
Sbjct: 741 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 799
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ V T+ V CSL N E C AC
Sbjct: 800 AGGGASVAQAAPAPVAKATEAEAVACSLENPEACEAC 836
>gi|442322489|ref|YP_007362510.1| ribonucleoside-diphosphate reductase [Myxococcus stipitatus DSM
14675]
gi|441490131|gb|AGC46826.1| ribonucleoside-diphosphate reductase [Myxococcus stipitatus DSM
14675]
Length = 833
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/820 (42%), Positives = 489/820 (59%), Gaps = 44/820 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E+V +KI + K GLS D + V+ K +G+Y G TT +LD L+
Sbjct: 46 MRVRKRNGTAESVDLNKIVRAVGKSCVGLS--RVDVMRVATKTISGLYDGATTRELDSLS 103
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+YA L+AR+ + + K SFS+++ +G K LI
Sbjct: 104 IQTAAALIVEEPEYARLSARLLATFIQKEVSNQDIHSFSQSVA---------AGHKHGLI 154
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + + NA L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 155 ADRLLQFVQANARKLNAAIDPTRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 214
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + D+ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY
Sbjct: 215 ACALSGDNAREAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADDLDAIYRK 274
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV H +RA GS IR TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 275 YSDIAMLSKFSGGIGVGYHRVRARGSLIRSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 333
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L++N G E R +L A WVPDLFM+RV++ G WSLF P
Sbjct: 334 GACCVYLESWHADIEDFLELRENTGDEARRTHNLNLANWVPDLFMKRVESEGDWSLFDPK 393
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +GAEFEK Y E G A + V+A++L+ ++ + +TG +M FKD NRK
Sbjct: 394 VVPHLTDLFGAEFEKAYVEAEASGLAMRKVKARDLYARMMKTLAQTGNGWMTFKDISNRK 453
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ L I SNLCTEI+E TS ETAVCNL S+ L R V +
Sbjct: 454 SNQTGLPQNVIHLSNLCTEILEVTSQGETAVCNLGSLNLGRMVVDGK------------- 500
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFE+L + + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 501 -------FDFERLRANAQLALKQLDRVIDLNYYPIPTAADSNRRWRPVGLGLMGLQDVFF 553
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L +AF++PEA+ L+K I E IY+ AL TS E+A + G + ++ + ++G Q W V
Sbjct: 554 QLKLAFDAPEARALSKKISEEIYFAALTTSCELAEQFGAHPSFPETRAAQGEFQFASWGV 613
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I K+G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 614 TPEDPARWDALRARIMKHGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 673
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ DL +G+W+ +++N+I +GS+Q++ E+PE L+ IY+T WE+ +L+D
Sbjct: 674 FLQVNRYLVRDLQALGMWNESVRNRIKLAEGSIQELTELPETLRAIYRTAWELPMRSLID 733
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +IDQSQSLN+ ++ PN K++S++F W +GLKT YYLRSR A K TV
Sbjct: 734 MAADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVS 792
Query: 773 TS-VFKEKPEKPELVVDDE--TKMAQVVCSLTNREECMAC 809
S P P V T V CSL N E C AC
Sbjct: 793 GSGATATAPVTPAPVAAASTVTDAEAVACSLENPEACEAC 832
>gi|108757444|ref|YP_633212.1| ribonucleoside-diphosphate reductase subunit alpha [Myxococcus
xanthus DK 1622]
gi|108461324|gb|ABF86509.1| ribonucleoside-diphosphate reductase, alpha subunit [Myxococcus
xanthus DK 1622]
Length = 785
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/817 (41%), Positives = 486/817 (59%), Gaps = 41/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL D + V+ K +G+Y G TT +LD L+
Sbjct: 1 MRVRKRNGGTETVDLNKIVRAVGRSCVGLP--RVDAMRVATKTISGLYDGATTRELDSLS 58
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+Y L+AR+ + + K SFS+++ +G K LI
Sbjct: 59 IQTAAALIVEEPEYGRLSARLLATFIQKEVSNQDIHSFSQSVA---------AGHKHGLI 109
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + + NA L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 110 ADRLLQFVQANARKLNAAIDPSRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 169
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + D+++ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY+
Sbjct: 170 ASALSGDNVNEAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 229
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 230 YSDIAMLSKFSGGIGVAYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 288
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L++N G + R +L A WVPDLFM+RV+ +G WSLF P
Sbjct: 289 GACCVYLETWHADIEDFLELRENTGDDARRTHNLNLANWVPDLFMKRVEADGDWSLFDPK 348
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE+ Y E +G A + V+A++L+ ++ S +TG +M FKD NRK
Sbjct: 349 SVPHFTDLYGDAFEQAYAKAEADGLAMRKVKARDLYARMMKSLAQTGNGWMTFKDISNRK 408
Query: 415 SNQQNLG--TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ I SNLCTEI+E TS ETAVCNL S+ L R + +
Sbjct: 409 SNQTGKAGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLSRMLVDGK------------- 455
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFE+L + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 456 -------FDFERLRANAQLAMRQLDRVIDLNYYPIPTAASSNKRWRPVGLGLMGLQDVFF 508
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L +AF+S EA+ L+K I E IY+ AL TS E+A + G +E++ + +KG LQ D W V
Sbjct: 509 QLKLAFDSAEARALSKKISEEIYFAALTTSCELAEQYGAHESFAETRAAKGELQFDHWGV 568
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR I K+G+RNSL++A PTA+ + I+G EC EP SN++ R LSG+
Sbjct: 569 VPEDTARWDALRQRIMKHGLRNSLMIAIAPTATIASIVGCYECIEPQVSNLFKRETLSGD 628
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ DL +G+W+ I+N+I +GSVQ I E+PE L+ +Y+T WE+ +L+D
Sbjct: 629 FLQVNRYLVRDLQALGLWNENIRNRIKMAEGSVQDITELPENLRAVYRTAWELPMRSLLD 688
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
M DRG +IDQSQSLN+ ++ PN K++S++F W +GLKT YYLRSR A K TV
Sbjct: 689 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 747
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ V T+ V CSL N E C AC
Sbjct: 748 AGGGASVAQAAPAPVAKATEAEAVACSLENPEACEAC 784
>gi|347756559|ref|YP_004864122.1| ribonucleoside-diphosphate reductase subunit alpha [Candidatus
Chloracidobacterium thermophilum B]
gi|347589076|gb|AEP13605.1| ribonucleoside-diphosphate reductase, alpha subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 800
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/820 (41%), Positives = 484/820 (59%), Gaps = 48/820 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL+ + D V+ K G+Y G TT++LD+L+
Sbjct: 17 MRVRKRNGSYEPVDVNKIIRAVGRCCTGLT--NIDAYRVATKTIGGLYDGATTAELDQLS 74
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA++ P+Y+ LAAR+ + +HK + SFS++I +G LI
Sbjct: 75 INTAASLIVEEPEYSRLAARLLATYIHKEVRNQNIYSFSQSIT---------AGYDLGLI 125
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
D + + +N LD I +RD ++YFG +T+ YLLK V+E PQ+ +RV
Sbjct: 126 NDRVRNFVSENRRKLDEAICDERDQAFEYFGLRTVYDRYLLKHPTSRAVLETPQYFFLRV 185
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + + AI+ Y ++S + ++PTLFNAGT QLSSCFL+ +D + IY+
Sbjct: 186 ASGLAQT-VAEAIELYQLLSSLEYMASTPTLFNAGTRHEQLSSCFLLDSPEDDLAAIYQK 244
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK AGGIG++ H +R+ GS IRGTNG SNGIVP L+ + + V+QGG KRK
Sbjct: 245 YTDVALLSKFAGGIGLAYHRVRSKGSLIRGTNGHSNGIVPWLKTLDSSVAAVNQGG-KRK 303
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWHADI +FL L+ N G E R +L A W+PDLFM+RV+ +G WSLF P
Sbjct: 304 GACCVYLEPWHADIEDFLELRDNTGDEARRTYNLNLANWIPDLFMKRVEEDGPWSLFDPK 363
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +G EFE Y E E + ++A++L+ ++ + +TG +M FKD NRK
Sbjct: 364 LVPHLPDLYGEEFEAAYLKAESEKLYTRQIRARDLYQRMMRTLAQTGNGWMTFKDAANRK 423
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
NQ Q + SNLCTEIIE TSPTETAVCNL S+ L R V +
Sbjct: 424 CNQTAQPGRVVHLSNLCTEIIEVTSPTETAVCNLGSLNLARHVTDGR------------- 470
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFEKLA I L+++ID+N+YP+ + SN R RPIG+G+ GL D F
Sbjct: 471 -------FDFEKLARNVRIAVRQLDRVIDINFYPIPSTAASNRRWRPIGLGLMGLQDVFF 523
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F+SPEA +L+ I E +YYHAL S ++A GP+ + + ++GILQ D+W V
Sbjct: 524 QLRLPFDSPEALELSTRIQEEVYYHALAASCDLAEVHGPHPAFPETRAAQGILQFDLWGV 583
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR+ I G+RNSLL+A PTA+ + I G E EP SN++ R LSG+
Sbjct: 584 TPPDPERWKALRERIRATGLRNSLLIAIAPTATIASICGCYEAIEPQVSNLFKRETLSGD 643
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ +N++L+ DL +G+W+ I+ +I DGS+Q I IPE+L+ +Y+T WE+ L+D
Sbjct: 644 FLQINRYLVEDLKRLGLWNEDIRTQIKLADGSIQGIAAIPEDLRRLYRTAWELPMRALID 703
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA RG YIDQSQSLN+ M+ P+ K++S++ W +GLKT YYLRSR A K TV
Sbjct: 704 MAAARGAYIDQSQSLNLFMESPSIGKLSSMYMYAWKKGLKT-TYYLRSRPATTIAKATVA 762
Query: 773 TSVF---KEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P P+ D+ +A CSL N E C AC
Sbjct: 763 PTAAGTGGNGPGAPQPTPSDDAALA---CSLANPESCEAC 799
>gi|390957922|ref|YP_006421679.1| ribonucleoside-diphosphate reductase subunit alpha [Terriglobus
roseus DSM 18391]
gi|390958264|ref|YP_006422021.1| ribonucleoside-diphosphate reductase subunit alpha [Terriglobus
roseus DSM 18391]
gi|390412840|gb|AFL88344.1| ribonucleoside-diphosphate reductase, alpha subunit [Terriglobus
roseus DSM 18391]
gi|390413182|gb|AFL88686.1| ribonucleoside-diphosphate reductase, alpha subunit [Terriglobus
roseus DSM 18391]
Length = 825
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/831 (40%), Positives = 499/831 (60%), Gaps = 54/831 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KR+G E V +KI +++ YGL +H D + ++ K G+Y G TT +LD ++
Sbjct: 26 MHVKKRNGALEPVDVNKIVRAVQRSGYGL--QHVDAIRIASKTIGGLYDGATTRELDAIS 83
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ P Y+ LA+R+ ++ + K SFS++++ Y + G+ +P +
Sbjct: 84 IDTAASLIAEEPQYSKLASRLLLATILKEVAGQNLHSFSQSVE-----YGAQVGIVSPAV 138
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
A E + + L+ I D D ++YFG +T+ YLL+ + KV+E PQH +RV
Sbjct: 139 A----EFVRIHMRKLNQAIKEDNDDRFEYFGLRTVYDRYLLRDPLSRKVIETPQHFFLRV 194
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ AI+ Y+++S + +SPTLFN+GT PQ+SSC+L DS+E IY++
Sbjct: 195 ACGLAGTP-HEAIEFYNLISSHDYMPSSPTLFNSGTKHPQMSSCYLHDSPQDSLESIYDS 253
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
K+ A++SK +GGIG++ H +R+ GS IR TNG SNGIVP LR + + V+QGG KRK
Sbjct: 254 YKDVALLSKFSGGIGLAFHRVRSEGSLIRATNGLSNGIVPWLRTLDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWHADI FL L++N G R +L A W+PDLFM+RV +G WSLF P
Sbjct: 313 GACCVYLEPWHADIESFLELRENTGDLSRRTYNLNLANWIPDLFMKRVDEDGMWSLFDPK 372
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +G EFEK Y E + + ++A++L+ ++ S ETG +M FKD CN K
Sbjct: 373 LVPQLPDLFGEEFEKAYIQAEEDKIYYRQMKARDLYARMMRSLAETGNGWMTFKDACNVK 432
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
+NQ L I SNLCTEI E TS ETAVCNL S+ L R ++ +
Sbjct: 433 NNQTGLPGNVIHLSNLCTEITEVTSKDETAVCNLGSVNLGRHMKTDE------------- 479
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDFEKLA + L+++ID+N+YPV+ A ++N R RP+G+GV GL D F
Sbjct: 480 --NGKTVFDFEKLANTVRVAVPMLDRVIDINFYPVQQALKANNRWRPVGLGVMGLQDVFF 537
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ + F+SPEAQ L+ I E IYY+A+ ++E+A K GP+ +++ + +++G Q D+W +
Sbjct: 538 QMRLPFDSPEAQALSTKIQEEIYYYAMLATTELAEKNGPHPSFNETRLAQGNFQFDLWKI 597
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
PS+ W LR I ++GVRNSLL+A PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 598 TPSEPERWEALRQRIKQSGVRNSLLIAIAPTATIASIVGCYECIEPQISNLFKRETLSGE 657
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+++L +G+W+ ++ K+ +GSVQ I ++ +ELK+IY+TVWE+ +L+D
Sbjct: 658 FLQVNRYLINELKALGMWNEEMRMKLKMSEGSVQNIDDLTDELKLIYRTVWEVPMRSLID 717
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA R YIDQ+QSLN+ + PN +++S++ W +GLKT YYLRSR A K TV
Sbjct: 718 MAAARNAYIDQAQSLNLFSESPNIGRLSSMYMYAWKQGLKT-TYYLRSRPATKIAKTTVQ 776
Query: 773 TSVFKEK--------------PEKPELVVDDETKMAQVVCSLTNREECMAC 809
PE + +D A + CSL N E C AC
Sbjct: 777 KGAMSSSLPQTAQAQLQNVSVPEPEQQPIDAS---AAIACSLENPESCEAC 824
>gi|328784177|ref|XP_001121495.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit [Apis
mellifera]
Length = 610
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/527 (59%), Positives = 386/527 (73%), Gaps = 41/527 (7%)
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
+FEFL+LKKN GKEE+RAR+LFYALW+PDLFM+RV N W+L CP+E+ GLAD WG EF
Sbjct: 102 VFEFLDLKKNTGKEENRARELFYALWIPDLFMKRVLDNDIWTLMCPHESPGLADVWGNEF 161
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSN 427
E LYT YE E + K+ +QA++LW IL SQ+ETGTPYML+KD CNRKSN QN+GTIKSSN
Sbjct: 162 EILYTRYENEKRYKRQIQARDLWTAILISQVETGTPYMLYKDHCNRKSNHQNIGTIKSSN 221
Query: 428 LCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAE 487
LCTE+++Y+SP E AVCNLASIA+ FV P+ N+ FDF+KL +
Sbjct: 222 LCTEVVQYSSPDEVAVCNLASIAVNMFVN----PI--------------NQTFDFQKLLK 263
Query: 488 VTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLN 547
VT IVT NL+KIIDVNYYP+ AR+SN RHRPIGIG+QGLAD F+L+ FES EAQ+LN
Sbjct: 264 VTKIVTCNLDKIIDVNYYPIPEARKSNFRHRPIGIGIQGLADAFLLMRYPFESEEAQKLN 323
Query: 548 KDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMI 607
IFET+YY AL+ S E+A ++G YETY SPVSKGILQ DMWNVIP++ WDW +L+ I
Sbjct: 324 IQIFETLYYGALEASCELAEEKGTYETYEGSPVSKGILQYDMWNVIPTNLWDWTILKKKI 383
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HLL DLTE
Sbjct: 384 AKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHLLRDLTER 443
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
+W +KN+II ++GS+Q I IP++LKM+YKTVWEI Q ++ MA DRG +IDQSQSL
Sbjct: 444 DLWDEDMKNEIIANNGSIQDIERIPDDLKMLYKTVWEIPQKIILKMAADRGAFIDQSQSL 503
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE------ 781
N+HM +P +K+TS+HF W GLKTGMYYLR++ AA+A++FTVD S +
Sbjct: 504 NVHMAKPTTEKLTSMHFYGWKMGLKTGMYYLRTKPAANALQFTVDKSKLRNTSNITSNQS 563
Query: 782 ---------------KPELVVDDETKMAQVV--CSLTNREECMACGS 811
+ + D + +V CS N + CMACGS
Sbjct: 564 INSENDNNEELNNSSQNGWLQDQNKEDVDIVLACSRENGDACMACGS 610
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 76/95 (80%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
MYV+KRDGR+E VHFDKIT+R+ KL Y L ++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRISKLCYNLDMDYIDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFS 95
AETAA MTT HPDYA LAARIA+SNLHK T KSFS
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETTKSFS 101
>gi|351714774|gb|EHB17693.1| Ribonucleoside-diphosphate reductase large subunit [Heterocephalus
glaber]
Length = 542
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/645 (52%), Positives = 418/645 (64%), Gaps = 118/645 (18%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP ++ KV +Y GVTT +LD LAAETAA +TT HPDYA LAARIAVSNLHK TKK F
Sbjct: 5 DPAYITVKVIQALYCGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVF 64
Query: 95 SETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERS 154
S+ ++ +YN+ N +G +P++A +I++ + L+S IIYDRDF Y+YFGFKTLERS
Sbjct: 65 SDVMEVLYNYINPHNGKHSPMVAQSTLDIVLSSKDRLNSAIIYDRDFSYNYFGFKTLERS 124
Query: 155 YLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQ 214
LLK+ GKVVERP+HMLMRVS+GIHK+DID+A +TY+++S++WFTHASP L
Sbjct: 125 CLLKINGKVVERPRHMLMRVSVGIHKEDIDAATETYNLLSEKWFTHASPIL--------- 175
Query: 215 LSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVP 274
C+ YI GTNG SNG+VP
Sbjct: 176 --QCW-----------------------------------------YIAGTNGNSNGLVP 192
Query: 275 MLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWV 334
MLR++N T RYVDQ
Sbjct: 193 MLRMYNSTGRYVDQ---------------------------------------------- 206
Query: 335 PDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEIL 394
DLFM++V+TN W L CPNE GL + WG EFE LY YE +G ++VV+AQ LW+ I+
Sbjct: 207 -DLFMKQVETNQDWPLICPNECPGLDEVWGEEFEMLYESYEEQGHVRRVVKAQQLWYAII 265
Query: 395 TSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRF 454
+Q ETGTPYML+KD+ N+KSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +
Sbjct: 266 ETQTETGTPYMLYKDSYNQKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALKMY 325
Query: 455 VREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSN 514
V + H +DF+KLAEVT ++ NLNKII++NYYPV A SN
Sbjct: 326 V------ISEHT-------------YDFKKLAEVTKVIVRNLNKIININYYPVPEAHLSN 366
Query: 515 LRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYET 574
H PIGIGVQ LADTFIL+ FESPEAQ LNK IFETIYY AL+ S ++A + PYET
Sbjct: 367 KHHCPIGIGVQDLADTFILMRYPFESPEAQLLNKQIFETIYYVALEASCDLAKEHDPYET 426
Query: 575 YHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
Y SPVSKGIL +MWNV P+D WDW +L++ I+K G+RNSLL+AP+PTAST+QILGNNE
Sbjct: 427 YEGSPVSKGILWYEMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPIPTASTAQILGNNE 486
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKII 679
EPYTSNIY+RR+LSGEF + N HLL DLTE G+W+ +KN+II
Sbjct: 487 SIEPYTSNIYTRRILSGEFQIANPHLLKDLTEWGLWNEEMKNQII 531
>gi|456737525|gb|EMF62220.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Stenotrophomonas maltophilia EPM1]
Length = 800
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 339/817 (41%), Positives = 484/817 (59%), Gaps = 51/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGLHA--VDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR+ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + NA L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G E RA +L A WVPDLFM+RV+ + +WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE Y E +GKA + + A+ L+ ++ + ETG +M FKD CNR
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
M F+S EA+ L+K I E IY+HAL+TS E+A + G + +++++ + G LQ D WNV
Sbjct: 534 RKRMPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 593
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRSRIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+++L ++G+W+P +++ I +GS+ + +IPE L+ +Y+T WE+ +L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQS SLN+ M+ PN ++S++ W +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P K + DE + CSL N E C AC
Sbjct: 773 AAA----PAK--VFSPDEA----IACSLENPEACEAC 799
>gi|194363984|ref|YP_002026594.1| ribonucleoside-diphosphate reductase subunit alpha
[Stenotrophomonas maltophilia R551-3]
gi|194346788|gb|ACF49911.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia R551-3]
Length = 803
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 339/817 (41%), Positives = 483/817 (59%), Gaps = 48/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGLHA--VDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR+ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVG---------RGHEVGLI 134
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + NA L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDMSLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +D+ A+ Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVPEALALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHAD+ +FL L+ N G E RA +L A W+PDLFM+RV+ + +WSLF P
Sbjct: 313 GAACVYLETWHADVEDFLELRDNTGDESRRAHNLNLANWIPDLFMKRVEADQEWSLFDPR 372
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE Y E +GKA + + A+ L+ ++ + ETG +M FKD CNR
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYSRMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRAGNVIHLSNLCTEILEVTSAEETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
N FDF+KLA+ + L+++ID+N+YP+E+ARR NLR RP+G+G GL D F
Sbjct: 474 HFDGNGEFDFDKLADTVRLAVRQLDRVIDLNFYPIESARRGNLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ F+ EA+ L+K I ETIY+HAL+TS E+A + G + ++ ++ + G LQ D WNV
Sbjct: 534 RKRLPFDGAEARALSKKIAETIYFHALETSVELAQERGKHPSFADTRAASGELQFDAWNV 593
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR+ I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDAERWDSLRERIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+++L ++G W+P +++ I +GS+Q I +IPE L+ +Y+T WE+ +L+D
Sbjct: 654 FLQVNRYLVNELKKLGHWTPEMRDAIKLAEGSIQGITQIPETLRHVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +IDQS SLN+ M+ PN ++S++ W +G+KT YYLRSR A K TV
Sbjct: 714 MAADRGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ PE V E +A CSL N E C AC
Sbjct: 773 HAA----GAAPEKVFSPEEAIA---CSLENPEACEAC 802
>gi|424666639|ref|ZP_18103665.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia Ab55555]
gi|401070085|gb|EJP78603.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia Ab55555]
Length = 800
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 338/817 (41%), Positives = 484/817 (59%), Gaps = 51/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGLHA--VDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR+ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + NA L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G E RA +L A WVPDLFM+RV+ + +WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE Y E +GKA + + A+ L+ ++ + ETG +M FKD CNR
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ F+S EA+ L+K I E IY+HAL+TS E+A + G + +++++ + G LQ D WNV
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 593
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRARIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+++L ++G+W+P +++ I +GS+ + +IPE L+ +Y+T WE+ +L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQS SLN+ M+ PN ++S++ W +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P K + DE + CSL N E C AC
Sbjct: 773 AAA----PAK--VFSPDEA----IACSLENPEACEAC 799
>gi|190572322|ref|YP_001970167.1| ribonucleoside-diphosphate reductase large subunit
[Stenotrophomonas maltophilia K279a]
gi|190010244|emb|CAQ43852.1| putative ribonucleoside-diphosphate reductase large subunit
[Stenotrophomonas maltophilia K279a]
Length = 775
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 338/817 (41%), Positives = 484/817 (59%), Gaps = 51/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 1 MSVTKRNGTTELVDLNKIVRAVQRSSEGLHA--VDPMRVATRTISGLYNGATTRELDELS 58
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR+ + + K +FS+++ G + LI
Sbjct: 59 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 109
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + NA L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 110 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 169
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 170 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 228
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 229 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 287
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G E RA +L A WVPDLFM+RV+ + +WSLF P
Sbjct: 288 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 347
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE Y E +GKA + + A+ L+ ++ + ETG +M FKD CNR
Sbjct: 348 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 407
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E TS ETAVCNL SI L G+
Sbjct: 408 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 448
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 449 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 508
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ F+S EA+ L+K I E IY+HAL+TS E+A + G + +++++ + G LQ D WNV
Sbjct: 509 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 568
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 569 VPEDTARWDALRSRIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 628
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+++L ++G+W+P +++ I +GS+ + +IPE L+ +Y+T WE+ +L+D
Sbjct: 629 FLQVNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 688
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQS SLN+ M+ PN ++S++ W +G+KT YYLRSR A K TV
Sbjct: 689 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 747
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P K + DE + CSL N E C AC
Sbjct: 748 AAA----PAK--VFSPDEA----IACSLENPEACEAC 774
>gi|344205622|ref|YP_004790763.1| ribonucleoside-diphosphate reductase subunit alpha
[Stenotrophomonas maltophilia JV3]
gi|343776984|gb|AEM49537.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia JV3]
Length = 800
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 338/817 (41%), Positives = 485/817 (59%), Gaps = 51/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGLHA--VDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR+ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + NA L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDGALDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G E RA +L A WVPDLFM+RV+ + +WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE+ Y E +GKA + + A+ L+ ++ + ETG +M FKD CNR
Sbjct: 373 VVPEFTDLFGEAFEQAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRAGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ F+S EA+ L+K I E IY+HAL+TS E+A + G + +++++ + G LQ D WNV
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAAGGELQFDAWNV 593
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRARIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+++L ++G+W+P +++ I +GS+ + +IPE L+ +Y+T WE+ +L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQS SLN+ M+ PN ++S++ W +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P K + DE + CSL N E C AC
Sbjct: 773 AAA----PAK--VFSPDEA----IACSLENPEACEAC 799
>gi|338536258|ref|YP_004669592.1| ribonucleoside-diphosphate reductase subunit alpha [Myxococcus
fulvus HW-1]
gi|337262354|gb|AEI68514.1| ribonucleoside-diphosphate reductase, alpha subunit [Myxococcus
fulvus HW-1]
Length = 838
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 337/817 (41%), Positives = 485/817 (59%), Gaps = 41/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL D + V+ K +G+Y G TT +LD L+
Sbjct: 54 MRVRKRNGGTETVDLNKIVRAVGRSCQGLP--RVDAMRVATKTISGLYDGATTRELDSLS 111
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+Y L+AR+ + + K SFS+++ +G K LI
Sbjct: 112 IQTAAALIVEEPEYGRLSARLLATFIQKEVSNQDIHSFSQSVA---------AGHKHGLI 162
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + + NA L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 163 ADRLLQFVQANARKLNAAIDPSRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 222
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + D+++ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY+
Sbjct: 223 ASALSGDNVNEAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 282
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 283 YSDIAMLSKFSGGIGVAYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 341
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L++N G + R +L A WVPDLFM+RV+ +G WSLF P
Sbjct: 342 GACCVYLETWHADIEDFLELRENTGDDARRTHNLNLANWVPDLFMKRVEADGDWSLFDPK 401
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE+ Y E +G A + V+A++L+ ++ S +TG +M FKD NRK
Sbjct: 402 AVPHFTDLYGDAFEQAYAKAEADGLAMRKVKARDLYARMMKSLAQTGNGWMTFKDISNRK 461
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ ++ I SNLCTEI+E TS ETAVCNL S+ L R + +
Sbjct: 462 SNQTGKDGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLSRMLVDGK------------- 508
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFE+L + L+++ID+NYYP+ A SN R RP+G+G+ GL D F
Sbjct: 509 -------FDFERLRANAQLAMRQLDRVIDLNYYPIPAAASSNKRWRPVGLGLMGLQDVFF 561
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L +AF+S EA+ L+K I E IY+ AL TS E+A + G + ++ + ++G LQ D W V
Sbjct: 562 QLKLAFDSAEARALSKKISEEIYFAALTTSCELAEQYGAHASFPETRAARGELQFDHWGV 621
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR I K+G+RNSL++A PTA+ + I+G EC EP SN++ R LSG+
Sbjct: 622 VPEDTARWDALRQRIMKHGLRNSLMIAIAPTATIASIVGCYECIEPQVSNLFKRETLSGD 681
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ DL +G+W+ +N+I +GSVQ + E+PE L+ +Y+T WE+ +L+D
Sbjct: 682 FLQVNRYLVRDLQALGLWNENTRNRIKMAEGSVQDLTELPEHLRAVYRTAWELPMRSLLD 741
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
M DRG +IDQSQSLN+ ++ PN K++S++F W +GLKT YYLRSR A K TV
Sbjct: 742 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 800
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ V T+ V CSL N E C AC
Sbjct: 801 AGGGASVAQAAPAPVAKATEAEAVACSLENPEACEAC 837
>gi|383454420|ref|YP_005368409.1| ribonucleoside-diphosphate reductase subunit alpha [Corallococcus
coralloides DSM 2259]
gi|380733635|gb|AFE09637.1| ribonucleoside-diphosphate reductase subunit alpha [Corallococcus
coralloides DSM 2259]
Length = 823
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 347/819 (42%), Positives = 485/819 (59%), Gaps = 45/819 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI + K GLS D + V+ K +G+Y G TT +LD L+
Sbjct: 39 MRVKKRNGTAEPVDLNKIVRAVGKSCVGLS--RVDVMRVATKTISGLYDGATTRELDSLS 96
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+YA L+AR+ + + K +SFS+++ +G K LI
Sbjct: 97 IQTAAALIVEEPEYARLSARLLSTFIQKEVSNQDIQSFSQSVA---------AGHKHGLI 147
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + NA L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 148 ADRLLTFVQANARKLNAAIDPVRNDLFEYFGLRTVYDRYLLKNPQTREVIETPQDFFLRV 207
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + D+ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY+
Sbjct: 208 ACALSGDNAREAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 267
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV H +RA GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 268 YSDIAMLSKFSGGIGVGYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 326
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G E RA +L A WVPDLFM RV+ + +WSLF P
Sbjct: 327 GACCVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMRRVEADQEWSLFDPK 386
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +G F+K Y E +G+A + V+A++L+ ++ +TG +M FKD NRK
Sbjct: 387 TTPHLTDLFGDAFDKAYVAAEAQGQAVRKVKARDLYARMMKVLAQTGNGWMTFKDISNRK 446
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ Q I SNLCTEI+E TS ETAVCNL S+ L R V++
Sbjct: 447 SNQTGQPGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLGRMVKDGK------------- 493
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDF+ L + + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 494 -------FDFDLLRSNAMLALKQLDRVIDLNYYPIPTAADSNRRWRPVGLGLMGLQDVFF 546
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F+S EA+ L+K I E IYY AL TSS++A + G + ++ + +KG LQ D W +
Sbjct: 547 QLRLPFDSVEARNLSKKISEEIYYAALVTSSDLAEQFGAHPSFPETRAAKGELQFDSWGI 606
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR I K G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 607 VPEDTLRWDALRSRIMKVGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 666
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ DL ++G+W+ +N+I +GSVQ + E+PEEL+ IY+T WEI +L+D
Sbjct: 667 FLQVNRYLVRDLQQLGLWNENTRNRIKLAEGSVQDLTELPEELRAIYRTAWEIPMRSLLD 726
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
M DRG +IDQSQSLN+ ++ PN K++S++F W +GLKT YYLRSR A K TV
Sbjct: 727 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 785
Query: 773 TS--VFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
P V E + V CSL N E C AC
Sbjct: 786 QGGPTITAAPTPAPQTVTAEAEA--VACSLENPEACEAC 822
>gi|408825289|ref|ZP_11210179.1| ribonucleoside-diphosphate reductase subunit alpha [Pseudomonas
geniculata N1]
Length = 800
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 337/817 (41%), Positives = 485/817 (59%), Gaps = 51/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGLHA--VDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR+ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + NA L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G E RA +L A WVPDLFM+RV+ + +WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE Y E +GKA + + A+ L+ ++ + ETG +M FKD CNR
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ F+S EA+ L+K I E IY+HAL+TS E+A + G + +++++ + G LQ D WNV
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 593
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR+ I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRERIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+++L ++G+W+ +++ I +GS+ + +IPE L+ +Y+T WE+ +L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTADMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQS SLN+ M+ PN ++S++ W +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
++ P K + DE + CSL N E C AC
Sbjct: 773 SAA----PAK--VFSPDEA----IACSLENPEACEAC 799
>gi|168702495|ref|ZP_02734772.1| ribonucleoside-diphosphate reductase, alpha subunit [Gemmata
obscuriglobus UQM 2246]
Length = 797
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 341/817 (41%), Positives = 474/817 (58%), Gaps = 55/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR G E V+ +KI +++ S GL DP+ V+ K G+Y G TT++LD L+
Sbjct: 27 MQVRKRSGALEDVNVNKIVRAVQRCSGGL--PGVDPMRVAVKTIGGLYDGATTAELDRLS 84
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA + + P+Y+ LAAR+ + + K SFS++I Y H L+
Sbjct: 85 IQTAAGLISEEPEYSRLAARLLATYVDKEVANQDVHSFSQSIAAGYRHG---------LV 135
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
A + NA L++ ++YFG +T+ YLL+ V+E P +RV
Sbjct: 136 AGGTMAFVAANARKLNAAAAEPAPDLFEYFGLRTVYDRYLLRHPDTRHVIETPAFFFLRV 195
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + D AI+ Y +MS + ++PTLFN+GT RPQ+SSC+L+ D++E IY+
Sbjct: 196 ACGLAESAAD-AIELYRLMSAHRYLPSTPTLFNSGTARPQMSSCYLLDSPADALEAIYDR 254
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ H IR+ GS IRGTNG SNGIVP L+ + + V+QGG KRK
Sbjct: 255 YADVAKLSKFAGGIGLAYHRIRSRGSLIRGTNGHSNGIVPWLKTLDSSVAAVNQGG-KRK 313
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHAD+ EFL L+ N G R +L A WVPDLFM RV+ WSLF P
Sbjct: 314 GACCVYLETWHADVEEFLELRDNTGDPARRTYNLNLANWVPDLFMRRVEAGEPWSLFDPK 373
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +GA F+ YT E +G A K V A++L+ ++ + ETG +M FKD CNR
Sbjct: 374 AVPHLTDLFGAAFDAAYTDAEAKGLAVKSVPARDLYARMMKTLAETGNGWMTFKDACNRA 433
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
NQ + + SSNLCTEI+E TS ETAVCNL S+ L R V
Sbjct: 434 CNQTAEPGAVVHSSNLCTEIVEVTSAGETAVCNLGSVNLARHVTRDG------------- 480
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDF LAE L++++DVN+YP A SN R RP+G+GV GL D F
Sbjct: 481 -------FDFAALAETVRTAVRFLDRVVDVNFYPTPEAAASNARWRPVGLGVMGLQDVFF 533
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F++P A++L++ I E IYYHAL TS E+AA GP+ ++ ++ + G+LQ D+W V
Sbjct: 534 KLKLPFDAPAARELSRRIQEEIYYHALATSCELAAARGPHPSFASTRAAAGVLQFDLWGV 593
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D W LR+ + G+RNSLLVA PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 594 EPTDPARWAALRERVRTTGLRNSLLVAIAPTATIASIVGAYECVEPQVSNLFKRETLSGE 653
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ DL +G+W+ ++ KI DGSVQ + E+P L+ +Y+T WE+ Q L+D
Sbjct: 654 FLQVNRYLVDDLKALGLWTDAVRTKIKLADGSVQSLSELPAGLRAVYRTAWEVPQRGLID 713
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQSQSLN+ ++ P K++S++ W +GLKT YYLRSR A K TV
Sbjct: 714 MAAERGPFIDQSQSLNLFLESPTIGKMSSMYMHAWKKGLKT-TYYLRSRPATAIAKTTV- 771
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
P D + V CSL N C AC
Sbjct: 772 ---------TPTAAPADTSA---VSCSLENPGACEAC 796
>gi|254521985|ref|ZP_05134040.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas sp. SKA14]
gi|219719576|gb|EED38101.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas sp. SKA14]
Length = 800
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 337/817 (41%), Positives = 485/817 (59%), Gaps = 51/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGLHA--VDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR+ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + NA L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDGALDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHAD+ +FL L+ N G E RA +L A WVPDLFM+RV+ + +WSLF P
Sbjct: 313 GAACVYLETWHADVEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE Y E +GKA + + A+ L+ ++ + ETG +M FKD CNR
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ F+S EA+ L+K I E IY+HAL+TS E+A + G + +++++ + G LQ D WNV
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 593
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR+ I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRERIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+++L ++G+W+ +++ I +GS+ + +IPE L+ +Y+T WE+ +L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTADMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQS SLN+ M+ PN ++S++ W +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
T+ P K + DE + CSL N E C AC
Sbjct: 773 TAA----PAK--VFSPDEA----IACSLENPEACEAC 799
>gi|386716673|ref|YP_006182999.1| ribonucleotide reductase subunit alpha [Stenotrophomonas
maltophilia D457]
gi|384076235|emb|CCH10816.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Stenotrophomonas maltophilia D457]
Length = 800
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 337/817 (41%), Positives = 484/817 (59%), Gaps = 51/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGLHA--VDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR+ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + NA L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G E RA +L A WVPDLFM+RV+ + +WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D +G FE+ Y E +GKA + + A+ L+ ++ + ETG +M FKD CNR
Sbjct: 373 VVPEFTDLFGEAFEQAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ F+S EA+ L+K I E IY+HAL+TS E+A + G + +++++ + G LQ D WNV
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAAGGELQFDAWNV 593
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRARIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+++L ++G+W+ +++ I +GS+ + +IPE L+ +Y+T WE+ +L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTADMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +IDQS SLN+ M+ PN ++S++ W +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P K + DE + CSL N E C AC
Sbjct: 773 AAA----PAK--VFSPDEA----IACSLENPEACEAC 799
>gi|115378662|ref|ZP_01465812.1| ribonucleoside-diphosphate reductase, alpha subunit [Stigmatella
aurantiaca DW4/3-1]
gi|115364328|gb|EAU63413.1| ribonucleoside-diphosphate reductase, alpha subunit [Stigmatella
aurantiaca DW4/3-1]
Length = 800
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 344/832 (41%), Positives = 489/832 (58%), Gaps = 57/832 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL+ D + VS K +G+Y G TT +LD L+
Sbjct: 2 MRVRKRNGSSEPVDLNKIVRAVGRCCAGLT--RVDALRVSTKTISGLYDGATTRELDSLS 59
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+YA L+AR+ + + K SFS+++ +G K LI
Sbjct: 60 IQTAAALIVEEPEYARLSARLLDTFIQKEVSNQEIHSFSQSVA---------AGHKHGLI 110
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + + NA L++ + R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 111 ADRLLQFVQANARKLNAAVDASRNDLFEYFGLRTVYDRYLLKNPQTREVIETPQDFFLRV 170
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + D AI+ Y + S + +SPTLFNAGT QLSSCFL+ D +E IY
Sbjct: 171 ACAL-TDTAKDAIELYRLFSSLEYLPSSPTLFNAGTRHEQLSSCFLLDSPSDELESIYRK 229
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS IR TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 230 YTDIAMLSKFSGGIGVAYHRVRARGSLIRSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 288
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G E R +L A WV DLFM RV+ + +WSLF P
Sbjct: 289 GACCVYLETWHADIEDFLELRDNTGDEARRTHNLNLANWVSDLFMRRVEADQEWSLFDPK 348
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +G FE+ Y E +G A + V+A++L+ ++ + +TG +M FKD NRK
Sbjct: 349 TVPHLTDLYGEAFERAYAAAEAQGLAARKVKARDLYARMMKTLAQTGNGWMTFKDISNRK 408
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ ++ I SNLCTEI+E T+ +ETAVCNL S+ L R + +
Sbjct: 409 SNQTGKDGNVIHLSNLCTEILEVTNASETAVCNLGSLNLGRMLSDGK------------- 455
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFE+L + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 456 -------FDFERLRVNVQLAIRQLDRVIDLNYYPIPTAAASNSRWRPVGLGLMGLQDVFF 508
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L M F++PEA+ L+K I E IY+ AL TS ++A + GP++ + + + G LQ D W V
Sbjct: 509 QLRMPFDAPEARALSKKISEEIYFSALTTSCDLAEQHGPHQAFSETRAAHGELQFDAWGV 568
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR+ I K G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 569 VPEDTARWAALRERIQKFGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 628
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VNK+L+ +L +G+W+ +++K+ +GSVQ + E+P ELK IY+T WE+ +L+D
Sbjct: 629 FLQVNKYLVRELQALGLWNDAMRSKLKMSEGSVQDLTELPAELKAIYRTAWEVPMRSLID 688
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +IDQSQSLN+ ++ PN K++S++F W +GLKT YY+RSR A K TVD
Sbjct: 689 MAADRGAFIDQSQSLNLFVEAPNIGKMSSMYFYAWQKGLKT-TYYMRSRPATRITKTTVD 747
Query: 773 TSVFKEKPEKPELVVDDE---------------TKMAQVVCSLTNREECMAC 809
TS + P + V T+ + CSL N E C AC
Sbjct: 748 TSHGQNASVAPNMPVASAAPAAPAPTVTAEPKYTEAEALACSLENPEMCEAC 799
>gi|310823069|ref|YP_003955427.1| ribonucleoside-diphosphate reductase [Stigmatella aurantiaca
DW4/3-1]
gi|309396141|gb|ADO73600.1| Ribonucleoside-diphosphate reductase [Stigmatella aurantiaca
DW4/3-1]
Length = 841
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 344/832 (41%), Positives = 489/832 (58%), Gaps = 57/832 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL+ D + VS K +G+Y G TT +LD L+
Sbjct: 43 MRVRKRNGSSEPVDLNKIVRAVGRCCAGLT--RVDALRVSTKTISGLYDGATTRELDSLS 100
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+YA L+AR+ + + K SFS+++ +G K LI
Sbjct: 101 IQTAAALIVEEPEYARLSARLLDTFIQKEVSNQEIHSFSQSVA---------AGHKHGLI 151
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + + NA L++ + R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 152 ADRLLQFVQANARKLNAAVDASRNDLFEYFGLRTVYDRYLLKNPQTREVIETPQDFFLRV 211
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + D AI+ Y + S + +SPTLFNAGT QLSSCFL+ D +E IY
Sbjct: 212 ACAL-TDTAKDAIELYRLFSSLEYLPSSPTLFNAGTRHEQLSSCFLLDSPSDELESIYRK 270
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS IR TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 271 YTDIAMLSKFSGGIGVAYHRVRARGSLIRSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 329
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G E R +L A WV DLFM RV+ + +WSLF P
Sbjct: 330 GACCVYLETWHADIEDFLELRDNTGDEARRTHNLNLANWVSDLFMRRVEADQEWSLFDPK 389
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +G FE+ Y E +G A + V+A++L+ ++ + +TG +M FKD NRK
Sbjct: 390 TVPHLTDLYGEAFERAYAAAEAQGLAARKVKARDLYARMMKTLAQTGNGWMTFKDISNRK 449
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ ++ I SNLCTEI+E T+ +ETAVCNL S+ L R + +
Sbjct: 450 SNQTGKDGNVIHLSNLCTEILEVTNASETAVCNLGSLNLGRMLSDGK------------- 496
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFE+L + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 497 -------FDFERLRVNVQLAIRQLDRVIDLNYYPIPTAAASNSRWRPVGLGLMGLQDVFF 549
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L M F++PEA+ L+K I E IY+ AL TS ++A + GP++ + + + G LQ D W V
Sbjct: 550 QLRMPFDAPEARALSKKISEEIYFSALTTSCDLAEQHGPHQAFSETRAAHGELQFDAWGV 609
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR+ I K G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 610 VPEDTARWAALRERIQKFGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 669
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VNK+L+ +L +G+W+ +++K+ +GSVQ + E+P ELK IY+T WE+ +L+D
Sbjct: 670 FLQVNKYLVRELQALGLWNDAMRSKLKMSEGSVQDLTELPAELKAIYRTAWEVPMRSLID 729
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +IDQSQSLN+ ++ PN K++S++F W +GLKT YY+RSR A K TVD
Sbjct: 730 MAADRGAFIDQSQSLNLFVEAPNIGKMSSMYFYAWQKGLKT-TYYMRSRPATRITKTTVD 788
Query: 773 TSVFKEKPEKPELVVDDE---------------TKMAQVVCSLTNREECMAC 809
TS + P + V T+ + CSL N E C AC
Sbjct: 789 TSHGQNASVAPNMPVASAAPAAPAPTVTAEPKYTEAEALACSLENPEMCEAC 840
>gi|389799152|ref|ZP_10202155.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 116-2]
gi|388443611|gb|EIL99753.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 116-2]
Length = 806
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 338/818 (41%), Positives = 479/818 (58%), Gaps = 54/818 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G QEAV +KI + + + GL DP+ V+ K G+Y G TT++LD+L+
Sbjct: 33 MRVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVTLKTIGGLYDGATTAELDQLS 90
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
AAA+T P+Y LAAR+ + + K +S+S++I G + L+
Sbjct: 91 IRIAAALTAEEPEYGQLAARLLGAYIDKEVSGQEIQSYSQSIA---------RGTELGLL 141
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
+ + + + N L+ I ++YFG +T+ YLL+ + V+E PQH MR+
Sbjct: 142 NERLRDFVAANTRKLNDAIDPLASRHFEYFGLRTVYDRYLLRHPQRRLVIETPQHFFMRI 201
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + ++I ++ Y ++S + +SPTLFNAGT QLSSC+L+ DS+E IY+
Sbjct: 202 ACALGGNEIGETLELYRLLSSLEYLASSPTLFNAGTAHEQLSSCYLLDSPRDSLESIYDK 261
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 262 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 320
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G + RA +L A W+PD FM RV+ +G+WSLF P
Sbjct: 321 GAACVYLESWHADIKDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVENDGEWSLFDPK 380
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D WG F+ Y E +G A K V+A+ L+ ++ + +TG +M FKD CN
Sbjct: 381 VVPHFVDSWGEAFDAAYRKAEADGLAVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 440
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E +S TETAVCNL S+ L R V + G+
Sbjct: 441 SNQTAKPGNVIHLSNLCTEILEVSSATETAVCNLGSVNLARHV-------------VDGA 487
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDF++LA I LN++ID+NYYP++TAR +N++ RP+G+GV GL D F
Sbjct: 488 -------FDFDQLAATVRIAVRQLNRVIDLNYYPIDTARTANMKWRPVGLGVMGLQDVFF 540
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-N 591
L + F+S EA L+ I E IY+HAL S E+A +G + + S + G LQ D W N
Sbjct: 541 KLRLPFDSAEALALSTRIAEEIYFHALSQSCELAETDGAHPGFAESRAANGELQFDHWPN 600
Query: 592 VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
P D W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 601 ATPHDIARWDALRERIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 660
Query: 652 EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLV 711
+F+ VN+HL +L +G+W+P I++ I +GS+Q I IP L+ IY+TVWE+ Q +L+
Sbjct: 661 DFLQVNRHLADELKTLGLWTPEIRDAIKLAEGSIQGIAAIPARLRAIYRTVWELPQKSLI 720
Query: 712 DMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
D+A RG +IDQSQSLN+ M+ PN +++S++ W G+KT YYLRSR A K TV
Sbjct: 721 DLAASRGAWIDQSQSLNLFMENPNIGQLSSMYMYAWKSGIKT-TYYLRSRPATKIAKTTV 779
Query: 772 DTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
V D E A V CSL N E C AC
Sbjct: 780 SA------------VSDQERANAAVFCSLENPEYCEAC 805
>gi|426403938|ref|YP_007022909.1| ribonucleoside-diphosphate reductase subunit alpha [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425860606|gb|AFY01642.1| ribonucleoside-diphosphate reductase alpha chain [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 821
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 340/822 (41%), Positives = 490/822 (59%), Gaps = 43/822 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KRDG E V KI R+ K GL+ DP+ V+ K +G+Y G +T +LD L
Sbjct: 29 MRVKKRDGTLEPVDVTKIVERVTKNCQGLT--QVDPLRVATKAISGLYDGASTKELDNLC 86
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
+TA+ + P+Y+ LAAR+ + + + + ++ D + G +A L+A+
Sbjct: 87 IQTASLLIGEDPEYSRLAARLLSTYIDEEVRSQKIQSFADSVSF-----GFQAGLLAEST 141
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGI 178
Y+ + N A L + I R ++YFG +T+ YLLK +V E PQ+ MRV+ G+
Sbjct: 142 YKFVETNKAALCAAIEPYRTDRFEYFGLRTVYDRYLLKNPTTRQVFETPQYFFMRVACGL 201
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
+ ++ AI+ Y ++S + ++PTLFN+GT RPQ+SSC+L+ D + IY+ +
Sbjct: 202 AQS-VEEAIEFYRLISSHDYMPSTPTLFNSGTMRPQMSSCYLLDSPSDDLTAIYQKYTDI 260
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGGIGV+ +R+ GS I+GTNG SNGI+P L+ + + V+QGG KRKGA
Sbjct: 261 ALLSKFAGGIGVAYSRVRSRGSLIKGTNGHSNGIIPWLKTMDSSVAAVNQGG-KRKGAAC 319
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
VYLE WH DI EFL L+ N G E RA +L A WVPDLFM+RV+ + WSLF P
Sbjct: 320 VYLETWHGDIEEFLELRDNTGDEAKRAHNLNLANWVPDLFMKRVEADAMWSLFDPKVVPH 379
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ- 417
D +G EFEK YT E + K ++A++L+ ++ + +TG +M FKD N K+NQ
Sbjct: 380 FVDTYGEEFEKAYTEAEEKKLYIKQLKARDLYSRMMKTLAQTGNGWMTFKDHANLKANQT 439
Query: 418 -QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSK 476
+ I SNLCTEI+E TS ETAVCNL S+ L R V +
Sbjct: 440 GEAGNVIHLSNLCTEILEVTSDKETAVCNLGSVNLSRHV--------------------E 479
Query: 477 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
N F+FEKLA + L++++D+N+YP+ TA+ SN + RP+G+GV GL D L+ +
Sbjct: 480 NGQFNFEKLARSVRTAVKYLDRVVDINFYPIGTAQDSNHKWRPVGLGVMGLQDALFLMKL 539
Query: 537 AFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD 596
F+S A+ L+ + E IYY+AL TS E+A K GP+ Y + +KG+LQ D+W V PS
Sbjct: 540 PFDSAAARDLSARVQEEIYYNALVTSCELAEKHGPHGAYEQTKAAKGLLQYDLWGVTPSQ 599
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
+ L++ I K+G+RNSL++A PTA+ + I+G E EP SN++ R LSGEF+ +
Sbjct: 600 PERFEKLKEKIKKHGLRNSLMIAIAPTATIASIVGCYEAIEPQVSNLFKRETLSGEFMQI 659
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
NK+L+ DL MGIW+ ++N+I DGS+Q + IP ++K +Y+TVWEI +LVDMA D
Sbjct: 660 NKYLVGDLKAMGIWTEDVRNEIKLQDGSIQDVAMIPPQIKELYRTVWEIPMKSLVDMAAD 719
Query: 717 RGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
RG YIDQ+QSLN+ + P K++S++ W +G+KT YYLRSR A K TV S
Sbjct: 720 RGAYIDQAQSLNLFQESPTIGKLSSMYMYAWKKGVKT-TYYLRSRPATKIAKTTVKASSN 778
Query: 777 KEKPEKPELVVD----DETKM----AQVV-CSLTNREECMAC 809
P E ++D E K A+V+ CSL N E C AC
Sbjct: 779 SANPTASESMMDAAPAQEAKKSYSDAEVIACSLENPEACEAC 820
>gi|389730177|ref|ZP_10189352.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 115]
gi|388440949|gb|EIL97269.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 115]
Length = 856
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 340/818 (41%), Positives = 474/818 (57%), Gaps = 45/818 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G QE V +KI + + + GL DP+ V+ K G+Y G TT +LD+L+
Sbjct: 74 MRVTKRNGGQETVDVNKIVRAVTRSADGLHA--VDPMRVALKTIGGLYDGATTQELDQLS 131
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAAA+T P+Y LAAR+ + + K +SFS+++ G + ++
Sbjct: 132 IRTAAALTAEEPEYGQLAARLLGAYIDKEVTGQEIQSFSQSVA---------HGAELGIL 182
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
+ + + + NA L+ I ++YFG +T+ YLL+ K V E PQ+ MR+
Sbjct: 183 NERLRDFVATNARKLNDAIDPLATRRFEYFGLRTVYDRYLLRHPQKRFVTETPQYFFMRI 242
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +DI ++ Y M+S + +SPTLFNAGT QLSSCFL+ DS+E IY+
Sbjct: 243 ACALGGNDIAETLELYRMLSSLEYIASSPTLFNAGTAHEQLSSCFLLDSPTDSLESIYDK 302
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS I+GTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 303 YADVAKLSKFAGGIGLAYSRVRSRGSLIKGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 361
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI EFL L+ N G E RA +L A W+PD FM RV+T+G WSLF P
Sbjct: 362 GAACVYLETWHADIEEFLELRDNTGDEARRAHNLNLANWIPDEFMRRVETDGDWSLFDPK 421
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D WG FE Y E EG A K V+A++L+ +L + +TG +M FKD CN
Sbjct: 422 VVPHFVDSWGETFETAYRKAEAEGLAAKTVKARDLYARMLRTLAQTGNGWMTFKDRCNAT 481
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E T+ ETAVCNL SI L R V + V
Sbjct: 482 SNQTAKADNVIHLSNLCTEILEVTNAGETAVCNLGSINLSRHVIDGAV------------ 529
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D++KLA LN++ID+N+YP++TA +N + RP+G+GV GL D F
Sbjct: 530 --------DYDKLATTVRTAVRQLNRVIDLNFYPIDTAATANRKWRPVGLGVMGLQDVFF 581
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-N 591
L + F+S EA L+ I E IY+HAL S+E+A EG + + S + G LQ D W N
Sbjct: 582 KLRLPFDSAEALALSSRIAEEIYFHALSQSNELAEAEGAHPGFAESRAASGDLQFDHWPN 641
Query: 592 VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
P D W LR+ I G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 642 AKPHDDARWNALRENIKAKGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 701
Query: 652 EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLV 711
+F+VVN++L+ +L +G+W+ +++ I +GS+Q I IPE L+ IY+TVWE+ Q L+
Sbjct: 702 DFLVVNRYLVDELKTLGLWTSEVRDAIKLAEGSIQGITAIPERLRQIYRTVWELPQKALI 761
Query: 712 DMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++ RG YIDQSQSLN+ M+ PN +++S++ W G+KT YYLRSR A K TV
Sbjct: 762 ELGAARGAYIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 820
Query: 772 DTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ K +D + A V CSL N E C AC
Sbjct: 821 SAGKAEAKAAP---AIDQDQASAAVFCSLENPEYCEAC 855
>gi|162452148|ref|YP_001614515.1| ribonucleoside-diphosphate reductase [Sorangium cellulosum So ce56]
gi|161162730|emb|CAN94035.1| Ribonucleoside-diphosphate reductase [Sorangium cellulosum So ce56]
Length = 838
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 321/781 (41%), Positives = 477/781 (61%), Gaps = 37/781 (4%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + LS D + V+ K +G+Y G TT +LD+L+
Sbjct: 43 MRVKKRNGSSEPVDVNKIVRAVSRSCAALS--DVDALRVATKTISGLYDGATTRELDQLS 100
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ + P YA LAAR+ + + K + +FS+++ G + LI
Sbjct: 101 IQTAASLIADEPQYAKLAARLLATYIDKEVRNQEIHAFSQSVA---------VGRRLGLI 151
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
D ++ + +NA L+ I RD + +YFG +TL YLLK V+E PQ +R+
Sbjct: 152 NDRLHGFVAQNARKLNDAIEPARDHELEYFGLRTLYDRYLLKHPETRLVIETPQQFFLRI 211
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + + A++ Y + S + +SPT+FN+GT QLSSCFL+ DD +E IY+
Sbjct: 212 ACAL-SETAAQAVELYRLFSSLDYLPSSPTMFNSGTSHEQLSSCFLLDSPDDHLETIYQR 270
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIG++ H +R+ GS IR TNG S+GIVP L+ + + V+QGG KRK
Sbjct: 271 YTDVAMLSKFSGGIGLAYHRVRSRGSLIRATNGHSSGIVPWLKTLDASVAAVNQGG-KRK 329
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWHAD+ EFL+L+ N G E R +L A WVPDLFM+RV+ +G WSLF P
Sbjct: 330 GACCVYLEPWHADVEEFLSLRDNTGDEAARTHNLNLASWVPDLFMKRVEADGDWSLFDPK 389
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
+A L D +G EFE+ Y ER G AKK ++A+ L+ ++ + +TG +M FKD NR
Sbjct: 390 DARDLPDLYGEEFERRYVEAERAGLAKKTMKARELYARMMRTLAQTGNGWMTFKDKSNRA 449
Query: 415 SNQQNLG--TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
NQ L + SNLCTEI+E TS E+AVCNL SI L R H + +
Sbjct: 450 CNQTALPGRIVHLSNLCTEILEVTSNEESAVCNLGSINLAR-----------HTATLADG 498
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDFEKLA L+++ID+NYYP+ + RRSNLR RP+G+G+ GL D F
Sbjct: 499 AVA----FDFEKLARTVRTAVRQLDRVIDLNYYPIPSTRRSNLRWRPVGLGLMGLQDVFF 554
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ + F++P A++L++ I E +YYHAL TS+++AA++G + + + ++G LQ D W
Sbjct: 555 QMRLPFDAPAARELSRRISEEVYYHALSTSADLAAEKGRHPAFDETRAARGELQFDAWGA 614
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+P D W LR + G+RNSLLVA PTA+ + I G EC EP SN++ R LSG+
Sbjct: 615 VPEDAARWEALRARVQAEGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 674
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ +N++L+ +L +G W+ ++ ++ +GSVQ + E+PE+++ +++T WEI +L+D
Sbjct: 675 FLQMNRYLVAELKRLGAWNDAVRARLKLAEGSVQGMDELPEQIRAVFRTAWEIPMRSLID 734
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +IDQSQSLN+ ++ P +++S++F W +GLKT YYLRSR A K TV+
Sbjct: 735 MAADRGAFIDQSQSLNLFIENPTIGQLSSMYFHAWKKGLKT-TYYLRSRPATRIAKATVE 793
Query: 773 T 773
Sbjct: 794 A 794
>gi|430741871|ref|YP_007201000.1| ribonucleoside-diphosphate reductase subunit alpha [Singulisphaera
acidiphila DSM 18658]
gi|430013591|gb|AGA25305.1| ribonucleoside-diphosphate reductase, alpha subunit [Singulisphaera
acidiphila DSM 18658]
Length = 801
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 335/817 (41%), Positives = 483/817 (59%), Gaps = 57/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KR+GR E V +KI +++ S GL + D + ++ K G++ G TT +LD+L+
Sbjct: 33 MHVRKRNGRLEPVDVNKIVRAVRRTSGGLPS--VDIMRIAVKTIGGLFDGATTRELDQLS 90
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ P+Y+ LAAR+ + K SFS+ + +G + LI
Sbjct: 91 IQTAASLIAEEPEYSQLAARLLDCYIAKEVMNQDIHSFSQAVS---------TGHRLGLI 141
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
A + + + +A L++ ++YFG +T+ YLL+ V+E P + +RV
Sbjct: 142 ATETAQQVAADARKLNAAAAASPRDKFEYFGLRTVYDRYLLRHPTTRDVIETPAYFFLRV 201
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ ++ +D A+ + +M+ + +SPTLFN+GTPRPQ+SSC+L+ DS+E IY+
Sbjct: 202 ACGLSRNVVD-ALDLFELMASHRYMPSSPTLFNSGTPRPQMSSCYLLDSPADSLESIYDR 260
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ H IR+ GSYI+GTNG NG+VP L+ + + V+QGG +RK
Sbjct: 261 YADIAKLSKYAGGIGLAYHRIRSRGSYIQGTNGHGNGVVPWLKTMDSSVAAVNQGG-RRK 319
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI EFL LK N G E R +L A WVPDLFM+RV+ WSLF P
Sbjct: 320 GACCVYLESWHADIEEFLELKDNAGDEARRTYNLNLANWVPDLFMQRVEAGANWSLFDPK 379
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +G F+ Y E G A K V A++L+ ++ + ETG ++ FKD CNRK
Sbjct: 380 TVPHLTDLFGEAFDVAYAEAEENGLAVKQVAARDLYARMMKTLAETGNGWLNFKDACNRK 439
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + + SSNLCTEI+E TS ETAVCNL SI L + V +
Sbjct: 440 SNQTRVPGNVVHSSNLCTEIVEVTSAGETAVCNLGSINLVQHVDDDG------------- 486
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFE LAE L+ ++D+N+YP + SN R RP+GIG+ GL D
Sbjct: 487 -------FDFEALAETVRTAVPFLDAVVDINFYPTPESATSNRRWRPVGIGLMGLQDVLF 539
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F++PEA++L+ I E IY+HAL S ++A K GP+ ++ + ++G+LQ D+W
Sbjct: 540 HLNLPFDAPEARRLSARIQEEIYFHALSVSCDLAEKLGPHPSFAETRAAEGVLQIDLWGW 599
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
W LRD I ++G+RNSLLVA PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 600 EGGHDARWSDLRDRIRRHGLRNSLLVAIAPTATIASIVGAYECIEPQISNLFKRETLSGE 659
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ +L G+W+ I+N+I +GS+Q I EIP EL+ +Y+TVWE+ +L+D
Sbjct: 660 FLQVNRYLVKELKARGLWTEEIRNRIKLAEGSIQGIEEIPAELRRVYRTVWEVPMRSLID 719
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA DR +IDQSQSLN+ ++ P+ K++S++ W RGLKT YYLRSR A K TV
Sbjct: 720 MAADRAPFIDQSQSLNLFIESPSIGKLSSMYMYAWKRGLKTS-YYLRSRPATGIAKTTVS 778
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
S P P +QV CSL N E C +C
Sbjct: 779 LS-----PGMP----------SQVACSLENPESCESC 800
>gi|225873705|ref|YP_002755164.1| ribonucleoside-diphosphate reductase subunit alpha [Acidobacterium
capsulatum ATCC 51196]
gi|225791715|gb|ACO31805.1| ribonucleoside-diphosphate reductase, alpha subunit [Acidobacterium
capsulatum ATCC 51196]
Length = 792
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 341/817 (41%), Positives = 481/817 (58%), Gaps = 57/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KR+G E V +KI +++ S GLS D + V+ K G+Y G TT +LD ++
Sbjct: 24 MHVRKRNGELEPVDVNKIVRAVQRCSAGLS--QVDAIRVASKTIGGLYDGATTRELDAIS 81
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ P Y+ LAAR+ + + K SFS++I+ Y + G+
Sbjct: 82 IDTAASLIAEEPQYSKLAARLLLGTILKEVAGQNLHSFSQSIE-----YAHQEGVVNAAT 136
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
A+ + K +D E + DR +++FG +T+ YLL+ + KV+E PQ+ +RV
Sbjct: 137 AEFVRTHARKLNYAID-EQLSDR---FEFFGLRTVYDRYLLRDPLSRKVIETPQYFFLRV 192
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ AI+ Y +++ + +SPTLFN+GT PQ+SSC+L DS+E IY+T
Sbjct: 193 ACGLAGTP-HEAIEFYRLIASHDYMPSSPTLFNSGTKHPQMSSCYLHDSPSDSLESIYDT 251
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
K+ A++SK +GGIG++ H +R+ GS IR TNG SNGIVP LR + + V+QGG KRK
Sbjct: 252 YKDVALLSKFSGGIGLAFHRVRSEGSLIRATNGLSNGIVPWLRTLDSSVAAVNQGG-KRK 310
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWHAD+ +FL L++N G R +L A W+PDLFM RV+ +G WSLF P
Sbjct: 311 GACCVYLEPWHADVEQFLELRENTGDLSRRTYNLNLANWIPDLFMRRVEEDGMWSLFDPK 370
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +G EF+ Y E E + ++A++L+ ++ S ETG +M FKD CN K
Sbjct: 371 VVPQLPDLYGVEFDAAYEKAEAEQLYARQIKARDLYARMMRSLAETGNGWMTFKDACNLK 430
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
NQ + SNLCTEI E TS ETAVCNL SI L R V
Sbjct: 431 CNQTGKPGNVVHLSNLCTEITEVTSRDETAVCNLGSINLARHV----------------- 473
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
N FDFEKLAE + L+++ID+NYYPV A +N R RP+G+G+ GL D F
Sbjct: 474 ---ANGAFDFEKLAETVRVAVPMLDRVIDINYYPVHQAASANSRWRPVGLGLMGLQDVFF 530
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L M F+SPEAQQL+ I E IYYHAL S E+A K+G + + + ++ G LQ D+W V
Sbjct: 531 QLRMPFDSPEAQQLSTHIQEEIYYHALAASCELAEKQGAHPAFAETRLAAGQLQFDLWGV 590
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D W LR I ++GVRNSLL+A PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 591 KPADEARWNTLRARIQQHGVRNSLLIAIAPTATIASIVGCYECTEPQVSNLFKRETLSGE 650
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ DL E G+W+ ++ ++ +GSVQ I IP++LK IY+TVWE+ ++D
Sbjct: 651 FLQVNRYLVTDLKERGLWNEELRMRLKLGEGSVQAIDGIPDDLKQIYRTVWELPMRAIID 710
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+A +R +IDQSQSLN+ + PN +++S++ W GLKT YYLRSR A K TV
Sbjct: 711 LARERSPFIDQSQSLNLFAESPNIGRLSSMYMYAWKSGLKT-TYYLRSRPATRIAKTTVA 769
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
++ + A V CSL N C AC
Sbjct: 770 SA---------------KNATAAVACSLENPGSCEAC 791
>gi|42523461|ref|NP_968841.1| ribonucleoside-diphosphate reductase alpha chain [Bdellovibrio
bacteriovorus HD100]
gi|39575667|emb|CAE79834.1| ribonucleoside-diphosphate reductase alpha chain [Bdellovibrio
bacteriovorus HD100]
Length = 801
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 337/822 (40%), Positives = 489/822 (59%), Gaps = 43/822 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KRDG E V KI R+ K GL+ DP+ V+ K +G+Y G +T +LD L
Sbjct: 9 MRVKKRDGTLEPVDVTKIVERVTKNCQGLT--QVDPLRVATKAISGLYDGASTKELDNLC 66
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
+TA+ + P+Y+ LAAR+ + + + + ++ D + G +A L+A+
Sbjct: 67 IQTASLLIGEDPEYSRLAARLLSTYIDEEVRSQKIQSFADSVSF-----GYQAGLLAEHT 121
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGI 178
Y+ + N A L + I R ++YFG +T+ YLLK +V E PQ+ MRV+ G+
Sbjct: 122 YKFVETNKAALCAAIEPYRTDRFEYFGLRTVYDRYLLKNPTTRQVFETPQYFFMRVACGL 181
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
+ ++ AI+ Y ++S + ++PTLFN+GT RPQ+SSC+L+ D + IY+ +
Sbjct: 182 AQS-VEEAIEFYRLISSHDYMPSTPTLFNSGTMRPQMSSCYLLDSPSDDLSAIYQKYTDI 240
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGGIGV+ +R+ GS I+GTNG SNGI+P L+ + + V+QGG KRKGA
Sbjct: 241 ALLSKFAGGIGVAYSRVRSRGSLIKGTNGHSNGIIPWLKTMDSSVAAVNQGG-KRKGAAC 299
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
VYLE WH DI EFL L+ N G E RA +L A WVPDLFM+RV+ + WSLF P
Sbjct: 300 VYLETWHGDIEEFLELRDNTGDEAKRAHNLNLANWVPDLFMKRVEADAMWSLFDPKVVPH 359
Query: 359 LADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ- 417
D +G EFEK Y E + K ++A++L+ ++ + +TG +M FKD N K+NQ
Sbjct: 360 FVDTYGEEFEKAYVEAEEKKLYIKQLKARDLYSRMMKTLAQTGNGWMTFKDHANLKANQT 419
Query: 418 -QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSK 476
+ I SNLCTEI+E TS ETAVCNL S+ L R V +
Sbjct: 420 GEAGNVIHLSNLCTEILEVTSDKETAVCNLGSVNLARHV--------------------E 459
Query: 477 NRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
N F+FEKLA + L++++D+N+YP+ TA+ SN + RP+G+GV GL D L+ +
Sbjct: 460 NGQFNFEKLARSVRTAVKYLDRVVDINFYPIPTAQDSNHKWRPVGLGVMGLQDALFLMKL 519
Query: 537 AFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD 596
F+S A+ L+ + E IYY+AL TS E++ K GP+ + + +KG+LQ D+W V PS
Sbjct: 520 PFDSAAARDLSAKVQEEIYYNALVTSCELSEKHGPHGAFEQTKAAKGLLQYDLWGVTPSQ 579
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
+ L++ I K+G+RNSL++A PTA+ + I+G E EP SN++ R LSGEF+ +
Sbjct: 580 PERFEKLKEKIKKHGLRNSLMIAIAPTATIASIVGCYEAIEPQVSNLFKRETLSGEFMQI 639
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
NK+L+ DL MGIW+ ++N+I DGS+Q + IP ++K +Y+TVWEI +LVDMA D
Sbjct: 640 NKYLVSDLKAMGIWTEEVRNEIKLQDGSIQDVAMIPPQIKELYRTVWEIPMKSLVDMAAD 699
Query: 717 RGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
RG YIDQ+QSLN+ + P K++S++ W +G+KT YYLRSR A K TV S
Sbjct: 700 RGAYIDQAQSLNLFQESPTIGKLSSMYMYAWKKGVKT-TYYLRSRPATKIAKTTVKASSN 758
Query: 777 KEKPEKPELVVD----DETKM----AQVV-CSLTNREECMAC 809
P E ++D E K A+V+ CSL N E C AC
Sbjct: 759 SANPTASESMMDAAPAQEAKKSYSDAEVIACSLENPEACEAC 800
>gi|238879998|gb|EEQ43636.1| ribonucleoside-diphosphate reductase large chain [Candida albicans
WO-1]
Length = 583
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 308/567 (54%), Positives = 393/567 (69%), Gaps = 20/567 (3%)
Query: 8 GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAM 67
G +E KI L+++S+ L D ++ + V G+ +T +L AE A+
Sbjct: 9 GEEEDFDSVKIHKLLEEVSFNLGDLDLDQIV--ESVQRGLPSSLTIEELYTFIAEVIASR 66
Query: 68 TTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN 127
HPDYA LA RI L+ SFSE ++ + + +S +P I+ Y+++ K+
Sbjct: 67 VIYHPDYAILAGRIETRKLYLKVPYSFSENVERLRKYRPRKSNSYSP-ISSAFYKVVKKH 125
Query: 128 AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAI 187
LD I RD++ YFG KTLE SYLLK+ G+V E PQ++ MRV+IGIH++DI++
Sbjct: 126 GEFLDKVIDKTRDYNLTYFGIKTLESSYLLKIDGEVAELPQYLFMRVAIGIHQNDINAIA 185
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
+TY +MSQ++F HASPTL+NAG+ LSSCFLV MKDDSI+GI++TL E A+ISK++GG
Sbjct: 186 ETYDLMSQKYFIHASPTLYNAGSEFNYLSSCFLVAMKDDSIDGIFKTLNEAALISKASGG 245
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+ VHNIR+ GSYI TNG SNG+VPMLRV+N+TARYVDQGGGKR GAFA+Y+EPWH D
Sbjct: 246 IGIHVHNIRSNGSYIASTNGNSNGLVPMLRVYNNTARYVDQGGGKRPGAFAIYIEPWHGD 305
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
IF+ L ++KNHG EE R RDLFY LW+PDLFM+RV+ N W+LF PNEA GL+D +G EF
Sbjct: 306 IFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFSPNEAVGLSDVYGEEF 365
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSN 427
EKLY YE EG K V A LW IL SQ ETG PYML+KD CN KSNQ+N+GTIKSSN
Sbjct: 366 EKLYCKYESEGFGTK-VSAHKLWLAILHSQTETGGPYMLYKDACNTKSNQKNIGTIKSSN 424
Query: 428 LCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAE 487
LC EI+EY+SP ETAVCNLAS+ALP +++ + + FDFEKL
Sbjct: 425 LCCEIVEYSSPKETAVCNLASLALPTYLKTTEDAIG----------------FDFEKLHS 468
Query: 488 VTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLN 547
VT ++T NLN++IDV YPVETA SN RHRPI +GVQGLAD F L + F+S A+ LN
Sbjct: 469 VTKVLTRNLNRVIDVTKYPVETAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLN 528
Query: 548 KDIFETIYYHALKTSSEIAAKEGPYET 574
IFETIY+ AL+ S E+A KEGPYET
Sbjct: 529 IQIFETIYHAALEASVELAMKEGPYET 555
>gi|352086177|ref|ZP_08953756.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodanobacter
sp. 2APBS1]
gi|351679811|gb|EHA62945.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodanobacter
sp. 2APBS1]
Length = 806
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 335/818 (40%), Positives = 479/818 (58%), Gaps = 54/818 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G QEAV +KI + + + GL DP+ V+ K G+Y G TT++LD+L+
Sbjct: 33 MRVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVTLKTIGGLYDGATTAELDQLS 90
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
AAA+T P+Y LAAR+ + + K +S+S++I G + L+
Sbjct: 91 IRIAAALTAEEPEYGQLAARLLGAYIDKEVSGQEIQSYSQSIA---------RGTELGLL 141
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
+ + + + N L+ I ++YFG +T+ YLL+ + V+E PQH MR+
Sbjct: 142 NERLRDFVAANTRKLNDAIDPLASRHFEYFGLRTVYDRYLLRHPQRRLVIETPQHFFMRI 201
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + ++I ++ Y ++S + +SPTLFNAGT QLSSC+L+ DS+E IY+
Sbjct: 202 ACALGGNEIGETLELYRLLSSLEYLASSPTLFNAGTAHEQLSSCYLLDSPRDSLESIYDK 261
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 262 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 320
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G + RA +L A W+PD FM RV+ +G+WSLF P
Sbjct: 321 GAACVYLESWHADIKDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVENDGEWSLFDPK 380
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D WG F+ Y E +G A K V+A+ L+ ++ + +TG +M FKD CN
Sbjct: 381 VVPHFVDSWGEAFDAAYRKAEADGLAVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 440
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E +S TETAVCNL S+ L R V + G+
Sbjct: 441 SNQTAKPGNVIHLSNLCTEILEVSSATETAVCNLGSVNLARHV-------------VDGA 487
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDF++LA I LN++ID+NYYP++TAR +N++ RP+G+GV GL D F
Sbjct: 488 -------FDFDQLAATVRIAVRQLNRVIDLNYYPIDTARTANMKWRPVGLGVMGLQDVFF 540
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-N 591
L + F+S EA L+ I E IY++AL S E+A EG + + S + G LQ D W +
Sbjct: 541 KLRLPFDSAEALALSTRIAEEIYFNALSQSCELAEAEGAHPGFAESRAANGELQFDHWPS 600
Query: 592 VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
IP D W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 601 AIPHDGARWNALRERIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 660
Query: 652 EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLV 711
+F+ VN++L +L +G+W+ I++ I +GS+Q I IPE L+ IY+TVWE+ Q +L+
Sbjct: 661 DFLQVNRYLADELKTLGLWTSEIRDAIKLAEGSIQGIAAIPERLRQIYRTVWELPQKSLI 720
Query: 712 DMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
D+A RG +IDQSQSLN+ M+ PN +++S++ W G+KT YYLRSR A K TV
Sbjct: 721 DLAAARGAWIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 779
Query: 772 DTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ D A V CSL N E C AC
Sbjct: 780 SAA------------SDQAQANAAVFCSLENPEYCEAC 805
>gi|444917550|ref|ZP_21237645.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Cystobacter fuscus DSM 2262]
gi|444710891|gb|ELW51852.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Cystobacter fuscus DSM 2262]
Length = 796
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 331/817 (40%), Positives = 483/817 (59%), Gaps = 48/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G EA +KI + + GL D + V+ K AG+Y G +T +LD+L+
Sbjct: 19 MRVRKRNGTLEAADLNKIVRAISRCCDGL--RQVDAIRVATKTIAGLYDGASTQELDQLS 76
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA++T P+YA LAAR+ + + K SFS++I + + L+
Sbjct: 77 IQTAASLTLEEPEYARLAARLLATYIDKELSGQEVHSFSQSIAAAH---------RLGLV 127
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
+ + +++ NA L+ I R+ ++YFG +T+ YLLK V+E PQH MR+
Sbjct: 128 NERVAQLVAANARKLNDSIDPTRNRLFEYFGLRTVYDRYLLKHPTTRAVLETPQHFFMRI 187
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
++ + + + A++ Y S + +SPTLFN+GT QLSSCFL+ +D + IY+
Sbjct: 188 AVAL-GETVPEALELYRRFSLLEYVPSSPTLFNSGTRHEQLSSCFLLDSPEDELGSIYQR 246
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIG++ H IR+ GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 247 YTDVAMLSKFSGGIGLAYHRIRSRGSLITSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 305
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHAD+ EFL L+ N G E R +L A WVPDLFM+RV+ +G WSLF P
Sbjct: 306 GAACVYLETWHADLEEFLELRDNTGDEARRTHNLNLANWVPDLFMKRVEADGAWSLFDPK 365
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +G +FE+ Y E +G A K ++A+ ++ ++ + +TG +M FKD NR
Sbjct: 366 VVPHLTDLYGEDFERAYLEAEAKGLAAKSIKAREMYARMMRTLAQTGNGWMTFKDKSNRA 425
Query: 415 SNQQNLG--TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
NQ + SNLCTEI+E TS ETAVCNL SI L R H S +
Sbjct: 426 CNQTARPGRVVHLSNLCTEILEVTSKDETAVCNLGSINLAR-----------HTS--TDA 472
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+G FD+EKLA+ L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 473 QGKVT--FDWEKLAQTVRTAVRQLDRVIDLNYYPIATAESSNQRWRPVGLGIMGLQDVFF 530
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ + F++PEA+ L++ + E IY+HAL S E+AA+ G + + + ++G LQ + W V
Sbjct: 531 QMRLPFDAPEARTLSRKVSEEIYFHALSASVELAAEHGAHPAFPETRAAQGELQFEAWGV 590
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR + + G+RNSLL+A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 591 TPEDSARWEALRTRVKQTGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 650
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ +L +G W+ ++ +I +GS+Q I EIP E++ IY+T WE+ +L+D
Sbjct: 651 FLQVNRYLVEELKALGKWNEEMRTRIKLAEGSIQGISEIPAEVRAIYRTAWELPMRSLID 710
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +IDQSQSLN+ M+ PN +++S++ W +GLKT YYLRSR A K TV+
Sbjct: 711 MAADRGAFIDQSQSLNLFMESPNIGQLSSMYMYAWKKGLKT-TYYLRSRPATRIAKATVE 769
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ EKP T+ + CSL N E C AC
Sbjct: 770 AP----REEKP-------TEAQAIACSLENPEACEAC 795
>gi|357415821|ref|YP_004928841.1| ribonucleoside-diphosphate reductase subunit alpha
[Pseudoxanthomonas spadix BD-a59]
gi|355333399|gb|AER54800.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudoxanthomonas spadix BD-a59]
Length = 807
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 337/817 (41%), Positives = 479/817 (58%), Gaps = 46/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G EAV +KI +++ + GL DP+ V+ + +G+Y G +T +LDEL+
Sbjct: 28 MRVKKRNGGSEAVDLNKIVRAVQRCADGLHA--VDPMRVATRTISGLYDGASTQELDELS 85
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR+ + + K +FS++I G + LI
Sbjct: 86 IRTAALLIGEEPEYGRLAARLLANCIAKEVAGQQIHAFSQSIS---------RGHEVGLI 136
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
+ E + NA L+ I + D +++YFG +TL YLL+ KV+E PQ +R+
Sbjct: 137 NARLLEFVQANARKLNDAIDLNLDREFEYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 196
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + +++ A+ Y M++ + +SPTLFNAGT QLSSCFL+ DS+E IY
Sbjct: 197 ASAL-SEEVPEALALYQRMARLDYLPSSPTLFNAGTTHEQLSSCFLLDSPQDSLESIYAR 255
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 256 YGDIAQLSKFSGGIGVSYSRVRARGSLISSTNGHSNGIVPWLKTLDSSVAAVNQGG-KRK 314
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHAD+ +FL L+ N G + R +L A WVPDLFM+RV+ + WSLF P
Sbjct: 315 GAACVYLETWHADLEDFLELRDNAGDDARRTHNLNLANWVPDLFMQRVEADAPWSLFDPK 374
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
L D +G FE Y E +GKA K + A+ L+ ++ + ETG +M FKD CN
Sbjct: 375 TTPELPDLYGEAFEHAYLQAEAQGKATKTIAARKLYARMMRTLAETGNGWMTFKDKCNLA 434
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E TS ETAVCNL SI L G
Sbjct: 435 SNQTLRAGNVIHLSNLCTEILEVTSSDETAVCNLGSINL-------------------GR 475
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDF+KLA+ + L+++ID+N+YP++TARR NLR RP+G+G GL D F
Sbjct: 476 HFDDHGDFDFDKLAQTVRLAVHQLDRVIDLNFYPIQTARRGNLRWRPVGLGCMGLQDVFF 535
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+AF+S +A+ L+ I ETIY+HAL+TS E+A + G + ++ ++ + G LQ D WNV
Sbjct: 536 KKRLAFDSAQARALSNKIAETIYFHALETSCELAQQRGRHPSFADTRAASGALQFDAWNV 595
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 596 TPEDTARWDALRARIRQHGLRNSLLIAIAPTATIASIAGCYECVEPQLSNLFKRETLSGD 655
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ +L ++G+W+ +++ I +GS+Q I +IP+ L+ IY+T WEI +L+D
Sbjct: 656 FLQVNRYLVDELKKLGLWTAQMRDAIKLAEGSIQGIAQIPQTLRQIYRTAWEIPMRSLID 715
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA RG +IDQS SLN+ M+ PN ++S++ W +GLKT YYLRSR A K T+
Sbjct: 716 MAAGRGAFIDQSASLNLFMESPNIGALSSMYMYAWKQGLKT-TYYLRSRPATRIAKATLS 774
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ KP D+ V CSL N E C AC
Sbjct: 775 HDASQAPAPKPAFTPDEA-----VSCSLENPEGCEAC 806
>gi|389774174|ref|ZP_10192321.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
spathiphylli B39]
gi|388438589|gb|EIL95334.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
spathiphylli B39]
Length = 812
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 335/818 (40%), Positives = 474/818 (57%), Gaps = 54/818 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KR+G QEAV +KI + + + GL DP+ V+ K G+Y G TT++LD+L+
Sbjct: 39 MHVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVALKTIGGLYDGATTAELDQLS 96
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAAA+T P+Y LAAR+ + + K +SFS++I G ++
Sbjct: 97 IRTAAALTAEEPEYGQLAARLLGAYIDKEVSGQEIQSFSQSIA---------RGASLSIL 147
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
D + + + NA L+ I ++YFG +T+ YLL+ Q + V+E PQH MR+
Sbjct: 148 NDRLRDFVAANARKLNDAIDPLATRRFEYFGLRTVYDRYLLRHPQTRLVIETPQHFFMRI 207
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + ++I ++ Y ++S + +SPTLFNAGT QLSSC+L+ DS+E IY+
Sbjct: 208 ACALGGNEIGETLELYRLLSSLEYIASSPTLFNAGTCHEQLSSCYLLDSPVDSLESIYDK 267
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG++P L+ + + V+QGG KRK
Sbjct: 268 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLLPWLKTLDASVAAVNQGG-KRK 326
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G + RA +L A W+PD FM RV+ +G WSLF P
Sbjct: 327 GAACVYLESWHADIEDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVENDGDWSLFDPK 386
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D WG F+ Y E +G A K V+A+ L+ ++ + +TG +M FKD CN
Sbjct: 387 VVPHFVDSWGEAFDAAYRKAEADGLAVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 446
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E +S ETAVCNL S+ L R V +
Sbjct: 447 SNQTAKTGNVIHLSNLCTEILEVSSVDETAVCNLGSVNLARHVTDGA------------- 493
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FD+++LA LN++ID+NYYP+ TAR +N++ RP+G+GV GL D F
Sbjct: 494 -------FDYDQLAATVRTAVRQLNRVIDLNYYPIATARTANMKWRPVGLGVMGLQDVFF 546
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-N 591
L + F+S EA L+ I E IY+HAL S E+A EG + + S + G LQ D W
Sbjct: 547 KLRLPFDSAEALALSTRIAEEIYFHALSQSCELARVEGAHPGFAESRAASGELQFDHWPQ 606
Query: 592 VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
P D W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 607 ATPHDDTRWHALREQIRQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 666
Query: 652 EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLV 711
+F+ VN+HL +L +G+W+ I++ I +GS+Q I IPE L+ IY+TVWE+ Q L+
Sbjct: 667 DFLQVNRHLADELKALGLWTSDIRDAIKLAEGSIQGIAAIPERLRAIYRTVWELPQKALI 726
Query: 712 DMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++A RG YIDQSQSLN+ M+ PN +++S++ W G+KT YYLRSR A K TV
Sbjct: 727 ELAAARGAYIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 785
Query: 772 DTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ + D A V CSL N E C AC
Sbjct: 786 SS------------LPDQAQATAAVFCSLENPEYCEAC 811
>gi|194377960|dbj|BAG63343.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 295/473 (62%), Positives = 360/473 (76%), Gaps = 19/473 (4%)
Query: 339 MERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQI 398
M+RV+TN WSL CPNE GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ
Sbjct: 1 MKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQT 60
Query: 399 ETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK 458
ETGTPYML+KD+CNRKSNQQNLGTIK SNLCTEI+EYTS E AVCNLAS+AL +V
Sbjct: 61 ETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV--- 117
Query: 459 DVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHR 518
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RHR
Sbjct: 118 ----------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHR 161
Query: 519 PIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNS 578
PIGIGVQGLAD FIL+ FES EAQ LNK IFETIYY AL+ S ++A ++GPYETY S
Sbjct: 162 PIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGS 221
Query: 579 PVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
PVSKGILQ DMWNV P+D WDW VL++ I+K G+RNSLL+APMPTAST+QILGNNE EP
Sbjct: 222 PVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEP 281
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
YTSNIY+RRVLSGEF +VN HLL DLTE G+W +KN+II +GS+Q IPEIP++LK +
Sbjct: 282 YTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQL 341
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
YKTVWEI Q T++ MA +RG +IDQSQSLNIH+ +PN+ K+TS+HF W +GLKTGMYYL
Sbjct: 342 YKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYL 401
Query: 759 RSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMACGS 811
R+R AA+ I+FT++ K+K + + + E A +VCSL NR+EC+ CGS
Sbjct: 402 RTRPAANPIQFTLNKERLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 454
>gi|67598375|ref|XP_666214.1| ribonucleoside-diphosphate reductase large chain (ribonucleotide
reductase R1 subunit) [Cryptosporidium hominis TU502]
gi|54657163|gb|EAL35983.1| ribonucleoside-diphosphate reductase large chain (ribonucleotide
reductase R1 subunit) [Cryptosporidium hominis]
Length = 526
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 308/532 (57%), Positives = 383/532 (71%), Gaps = 32/532 (6%)
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
G K A+YLEPWH D+ EF+ ++KNHGKEE R RDLF ALWVPDLFMERV+ + W+L
Sbjct: 12 GSVKVPIAIYLEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTL 71
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDT 410
CP+E GL D WG +F+KLY YE++G+ +K ++AQ LWF IL +QIETGTP++ +KD
Sbjct: 72 MCPDECRGLQDVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDA 131
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
N KSNQ+NLGTI SSNLCTEIIEYTS E AVCNLASI LP+FV +
Sbjct: 132 ANSKSNQKNLGTIVSSNLCTEIIEYTSKDEVAVCNLASIGLPKFVDKN------------ 179
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
N+ FDF+KL EVT ++T NLNK+IDV YY ++ + SNLRHRP+GIG+QGLAD
Sbjct: 180 ------NKTFDFDKLKEVTKVITRNLNKLIDVGYYSLKECKNSNLRHRPLGIGIQGLADC 233
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW 590
F++L M +ES A++LNK IFE IYY AL S E+A K GPYETY SP SKGILQ DMW
Sbjct: 234 FMMLRMPYESEGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMW 293
Query: 591 NVIP-SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
V P S DW L+D ISK G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVL
Sbjct: 294 GVTPDSGLCDWDSLKDRISKYGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVL 353
Query: 650 SGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMT 709
SGEF VVN HLL+DL E+G+W +K II ++GS+Q I IPE+++ +YKTVWEIKQ T
Sbjct: 354 SGEFFVVNPHLLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKT 413
Query: 710 LVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKF 769
++DMA DRG Y+ QSQSLNIHM+ NF K++S+HF W +GLKTG+YYLR+++A I+F
Sbjct: 414 VIDMAADRGPYVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQF 473
Query: 770 TVDTSVFK-EKPEKPEL------VVDDETKMAQVVCSL-----TNREECMAC 809
TVD + K E EK L ++ ET+ + C L + EECM C
Sbjct: 474 TVDQQLLKSETKEKDSLETNKRQALEPETQKL-IACPLRPTNMKDDEECMMC 524
>gi|320107275|ref|YP_004182865.1| ribonucleoside-diphosphate reductase subunit alpha [Terriglobus
saanensis SP1PR4]
gi|319925796|gb|ADV82871.1| ribonucleoside-diphosphate reductase, alpha subunit [Terriglobus
saanensis SP1PR4]
Length = 815
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/817 (40%), Positives = 481/817 (58%), Gaps = 41/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ ++GL D + ++ K G+Y G TT +LD ++
Sbjct: 31 MGVRKRNGALEPVDVNKIVRAVQRNAHGLG--QVDAIRIASKTIGGLYDGATTRELDSIS 88
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHK----NTKKSFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ P Y+ LAAR+ + + K SFS++I Y + G+ +
Sbjct: 89 IDTAASLIAEEPQYSKLAARLLLGTIMKEVVGQNLHSFSQSIS-----YGYQEGVVSKAT 143
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
A+ + + K ++ E+ DR ++YFG +T+ YLL+ + KV+E PQH +RV
Sbjct: 144 AEFVQTHMRKLNHAINDEL-SDR---FEYFGLRTVYDRYLLRDPISRKVIETPQHFFLRV 199
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ AI+ Y++++ + +SPTLFN+GT Q+SSC+L DS++ IY+T
Sbjct: 200 ACGLAGTP-HEAIEFYNLIASHDYMPSSPTLFNSGTKHAQMSSCYLHDSPLDSLDSIYDT 258
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
K A++SK +GGIG++ H +R+ GS IR TNG SNGIVP LR + + V+QGG KRK
Sbjct: 259 YKNVALLSKFSGGIGLAFHRVRSEGSLIRATNGLSNGIVPWLRTLDSSVAAVNQGG-KRK 317
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWHADI FL L++N G R +L A W+PDLFM+RV +G WSLF P
Sbjct: 318 GACCVYLEPWHADIESFLELRENTGDLSRRTYNLNLANWIPDLFMQRVDEDGIWSLFDPK 377
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
E D +G EFE+ Y E + K + ++A++L+ ++ S ETG +M FKD CN K
Sbjct: 378 EVPTFPDLYGKEFEEAYIQAETDKKYHRQIKARDLYMRMMRSLAETGNGWMTFKDACNIK 437
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
+NQ + SNLCTEI E TS ETAVCNL S+ L R V +
Sbjct: 438 NNQTGKPGNVVHLSNLCTEITEVTSKDETAVCNLGSVNLARHVTPEGK------------ 485
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFEKLA I L+++ID+NYYPV A +N R RP+G+GV GL D F
Sbjct: 486 -------FDFEKLANTVRIAVPMLDRVIDINYYPVPQAASANARWRPVGLGVMGLQDVFF 538
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
+ + F+SPEA ++ I E IYY+A+ S E+A +EG + ++ + ++KG Q D+WNV
Sbjct: 539 QMRIPFDSPEALAISTKIQEEIYYYAVLASVELAEREGKHPSFDETRLAKGEFQFDLWNV 598
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D W LR I K+G+RNSLL+A PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 599 KPADPERWDALRQRILKSGIRNSLLIAIAPTATIASIVGCYECIEPQISNLFKRETLSGE 658
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN++L+ +L + G+W+ ++ ++ +GSVQ + ++PE+L+ +Y+TVWE+ +L+D
Sbjct: 659 FLQVNRYLIEELKQRGMWTEEMRVRMKMSEGSVQAMEDLPEDLRAVYRTVWEVPMRSLID 718
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
MA DR +IDQSQSLN+ + PN +++S++ W GLKT YYLRSR A K TV
Sbjct: 719 MARDRNAFIDQSQSLNLFAESPNIGRLSSMYMHAWKSGLKT-TYYLRSRPATKISKTTVS 777
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ + CSL N E C AC
Sbjct: 778 KAAAASAALADTASRPKVADAEAIACSLENPESCEAC 814
>gi|383315472|ref|YP_005376314.1| ribonucleoside-diphosphate reductase subunit alpha [Frateuria
aurantia DSM 6220]
gi|379042576|gb|AFC84632.1| ribonucleoside-diphosphate reductase, alpha subunit [Frateuria
aurantia DSM 6220]
Length = 816
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 335/818 (40%), Positives = 476/818 (58%), Gaps = 42/818 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M + KR G E V +KI + + + GL DP+ V+ K G+Y G TT +LD+L+
Sbjct: 31 MRITKRSGVTELVDVNKIVKAVTRSADGLHA--VDPMRVALKTIGGLYDGATTKELDQLS 88
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAAA+T+ P+Y LAAR+ + + K +SFS+++ G++ ++
Sbjct: 89 IRTAAALTSEEPEYGQLAARLLGAFIDKEVSGQEIQSFSQSVA---------RGVELGIL 139
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGKVV-ERPQHMLMRV 174
D + + + +A L+ I D ++YFG +T+ YLL+ Q ++V E P + MR+
Sbjct: 140 NDRLRDFVALHARKLNDAIDLDTTRRFEYFGLRTVYDRYLLRHPQSRLVLETPTYFFMRI 199
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + DI ++ Y ++S + +SPTLFNAGT QLSSCFL+ DS+E IY+
Sbjct: 200 ACALGGGDIGETLELYRLLSSLEYLASSPTLFNAGTTHEQLSSCFLLDSPTDSLESIYDK 259
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 260 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 318
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI EFL L+ N G E R +L A WVPD FM RV+T+G WSLF P
Sbjct: 319 GAACVYLETWHADIEEFLELRDNTGDHERRTHNLNLANWVPDEFMRRVETDGNWSLFDPK 378
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D WG FE Y E EG A K V+A++L+ +L + +TG +M FKD N
Sbjct: 379 IVPHFVDTWGETFEAAYRKAEAEGLAVKTVKARDLYARMLRTLAQTGNGWMTFKDRANAT 438
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E T+ ETAVCNL S+ L R V++
Sbjct: 439 SNQTARPENVIHLSNLCTEILEVTNAQETAVCNLGSVNLSRHVQDG-------------- 484
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
F+FE+L LN++ID+N+YP++TA +N + RP+G+G+ GL D F
Sbjct: 485 ------VFNFEQLGTTVRTAVRQLNRVIDLNFYPIDTAAVANRKWRPVGLGLMGLQDVFF 538
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-N 591
L +AF+SPEA L+ I E IYYHAL S EIA ++G + + + + G LQ D W
Sbjct: 539 KLRLAFDSPEALDLSSRISEEIYYHALAQSCEIAEQDGAHPGFPETRAANGELQFDYWPK 598
Query: 592 VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
+D W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 599 ASQADTARWDALREKIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 658
Query: 652 EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLV 711
+F+VVN++L ++L +G+W+ I+++I +GS+Q I IPE L++IY+T WE+ Q L+
Sbjct: 659 DFLVVNRYLSNELKALGLWTAEIRDQIKLAEGSIQGIMAIPERLRLIYRTTWELPQKALI 718
Query: 712 DMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++A R YIDQSQSLN+ M+ PN +++S++ W GLKT YYLRSR A K TV
Sbjct: 719 ELAAARSAYIDQSQSLNLFMENPNIGQLSSMYMYAWKSGLKT-TYYLRSRPATKIAKTTV 777
Query: 772 DTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P D + A V CSL N E C AC
Sbjct: 778 GMGGQNQAPVPAAPAADQQQAEAAVFCSLENPEYCEAC 815
>gi|389794220|ref|ZP_10197378.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
fulvus Jip2]
gi|388432745|gb|EIL89734.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
fulvus Jip2]
Length = 816
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 328/818 (40%), Positives = 471/818 (57%), Gaps = 54/818 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V KR+G QEAV +KI + + + GL DP+ V+ K G+Y G TT +LD+L+
Sbjct: 43 MHVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVALKTIGGLYDGATTQELDQLS 100
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAA++T P+Y LAAR+ + + K +SFS++I G + ++
Sbjct: 101 IRTAASLTAEEPEYGQLAARLLGAYIDKEVSGQEIQSFSQSIA---------RGAELGIL 151
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
D + + + NA L+ I ++YFG +T+ YLL+ + V+E PQH MR+
Sbjct: 152 NDRLRDFVATNARKLNDAIDPLATRRFEYFGLRTVYDRYLLRHPQRRLVIETPQHFFMRI 211
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + ++I ++ Y ++S + +SPTLFNAGT QLSSC+L+ DS+E IY+
Sbjct: 212 ACALGGNEIGETLELYRLLSSLEYIASSPTLFNAGTCHEQLSSCYLLDSPVDSLESIYDK 271
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG++P L+ + + V+QGG KRK
Sbjct: 272 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLLPWLKTLDASVAAVNQGG-KRK 330
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLE WHADI +FL L+ N G + RA +L A W+PD FM RV+++G WSLF P
Sbjct: 331 GAACVYLETWHADIEDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVESDGDWSLFDPK 390
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
D WG F+ Y E +G K V+A+ L+ ++ + +TG +M FKD CN
Sbjct: 391 VVPHFVDSWGETFDAAYRKAEADGLGVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 450
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ I SNLCTEI+E +S ETAVCNL S+ L R V +
Sbjct: 451 SNQTAKLENVIHLSNLCTEILEVSSVNETAVCNLGSVNLSRHVVDG-------------- 496
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
F++++LA LN++ID+NYYP+ TAR +N++ RP+G+GV GL D F
Sbjct: 497 ------VFNYDQLAATVRTAVRQLNRVIDLNYYPIPTARTANMKWRPVGLGVMGLQDVFF 550
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-N 591
L + F+S EA L+ I E IY++AL S E+A EG + + S + LQ D W N
Sbjct: 551 KLRLPFDSTEALALSTRIAEEIYFNALSQSCELAEGEGMHPGFAESRAANAELQFDYWPN 610
Query: 592 VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
P + W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 611 TTPHNTARWDALREKIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 670
Query: 652 EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLV 711
+F+ VN++L +L +G+W+ I++ I +GS+Q I IPE L+ IY+TVWE+ Q L+
Sbjct: 671 DFLQVNRYLADELKALGLWTSEIRDAIKLAEGSIQNINAIPERLRAIYRTVWELPQKALI 730
Query: 712 DMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++A RG YIDQSQSLN+ M+ PN +++S++ W G+KT YYLRSR A K TV
Sbjct: 731 ELAAARGAYIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 789
Query: 772 DTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ D A V CSL N E C AC
Sbjct: 790 SAA------------PDQAQATAAVFCSLENPEYCEAC 815
>gi|355717365|gb|AES05909.1| ribonucleotide reductase M1 [Mustela putorius furo]
Length = 434
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 291/430 (67%), Positives = 352/430 (81%), Gaps = 8/430 (1%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KRDGRQE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AETAA +TT HPDYA LAARIAVSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVAKST 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I++ N L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVS+GIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHE 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT RPQLSSCFL+ MKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR------K 294
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIX 300
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GAFA+YLEPWH DIFEFL+LKKN GKEE RARDLF+ALW+PDLFM+RV+TN WSL CPN
Sbjct: 301 GAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPN 360
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDT--CN 412
E GL + WG EFEKLY YE++G+ +KVV+AQ LW+ I+ SQ ETGTPYML+KD+ +
Sbjct: 361 ECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSRATS 420
Query: 413 RKSNQQNLGT 422
R Q N T
Sbjct: 421 RTWEQSNAAT 430
>gi|330467633|ref|YP_004405376.1| ribonucleoside-diphosphate reductase subunit alpha [Verrucosispora
maris AB-18-032]
gi|328810604|gb|AEB44776.1| ribonucleoside-diphosphate reductase, alpha subunit [Verrucosispora
maris AB-18-032]
Length = 791
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 328/819 (40%), Positives = 476/819 (58%), Gaps = 55/819 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ L + DP+ V+ K +G+Y G TT++LD+L+
Sbjct: 17 MQVRKRNGDTEPVDVNKIVKAVERWVTDL--DEIDPLRVATKTISGLYDGATTAELDKLS 74
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + + K + SFS++I+ Y H GL LI
Sbjct: 75 IQTAAELIGEEPQYSRLAARLLAAFVDKEVRGQQVASFSQSIR--YAH-----GLG--LI 125
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
D + +NA LD + D ++YFG +T+ YLL+ +VVE PQ+ L+RV
Sbjct: 126 GDATAAFVARNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQTRQVVETPQYWLLRV 185
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IYE
Sbjct: 186 ACGLSQTP-GEAIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYER 244
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 245 YHQVAKLSKFSGGIGISWTRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 303
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWH DI EFL L+ N G+E R +L A W+PD FM RV+ +G WSL P+
Sbjct: 304 GAACVYLEPWHPDIEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADGDWSLIDPS 363
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
+A L D +G F++ Y E+ KA + V+A++L+ ++ + +TG +M FKD NR
Sbjct: 364 DAPELPDLYGEAFDEAYRAAEK--KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDAANRL 421
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ TI SNLCTEI+E + TETAVCNL SI L + +
Sbjct: 422 SNQTGAPGNTIHLSNLCTEILEVNNDTETAVCNLGSINLAAHLTADGI------------ 469
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+EKL L+++ID+NYYP + A SN R RP+G+G+ GL D F
Sbjct: 470 --------DWEKLRATVRTAVLFLDRVIDINYYPAQQAAASNPRWRPVGLGLMGLQDAFF 521
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L M F+S A++L+ + E I AL+TS+++A + GP+ Y ++ ++G L PD+W
Sbjct: 522 TLRMPFDSTPARELSSRVQEEILLTALETSAQLAQQFGPHPAYDDTRAARGELHPDLWGA 581
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+ W LR+ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 582 DLTQAQRWAALRETIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 641
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ +N +L+ +L G+W+ +I+ +I +GSVQ I E+PE+++ +++T WE+ Q L+D
Sbjct: 642 FLQINTYLVRELKARGLWTASIREQIKRAEGSVQGIAELPEDVRQLFRTAWELPQRALID 701
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+A R +IDQSQSLN+ + P K++S++ W GLKT YYLRSR A + TV
Sbjct: 702 LAAARAPFIDQSQSLNLFISAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVA 760
Query: 773 TSVFKEKPEKPELVV--DDETKMAQVVCSLTNREECMAC 809
+ P P +V DDE + CSL N E C AC
Sbjct: 761 VT-----PAAPAIVAVGDDEA----LACSLENPESCEAC 790
>gi|328719872|ref|XP_003246886.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 766
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 325/789 (41%), Positives = 471/789 (59%), Gaps = 52/789 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAG-VYKGVTTSQLDEL 59
+YV KRDG E VH+D+I AR+K+L YGL E DP + V ++ G+TTSQLD+
Sbjct: 8 LYVQKRDGTIEKVHYDEIIARIKQLCYGL--EKIDPAATAIHVIKKCLFAGITTSQLDDA 65
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNE---RSGLKAPLI 116
AAE A M T HPDY LAARIA+SNLHK TK+ FS+ I D+ H N+ +GL
Sbjct: 66 AAEMAITMATIHPDYEKLAARIAISNLHKQTKEKFSDVIDDI--HKNDDYWNTGL----- 118
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+DDIYEIIMKN L+ I Y+ D+ DYFGFK L +++L+K + + +ERPQH+ M+V++
Sbjct: 119 SDDIYEIIMKNKDRLNEAINYENDYILDYFGFKYLTQNFLVKSENQTIERPQHLFMKVAV 178
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLS----SCFLVCMKDDSIEGIY 232
IH DDIDSAI+TY M+SQ+ SP + +L+ S + V M DSI+GIY
Sbjct: 179 SIHGDDIDSAIETYKMLSQK-LCMFSPVVMQLQPAARKLNVSVISHYSVAMIADSIDGIY 237
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+TL + + V VH IRA G+YI+G+NG S+G+ ML+ + D+ + + +
Sbjct: 238 DTLNRLSTFILPYSSVAVHVHKIRAAGTYIKGSNGKSSGLPLMLKQY-DSMVHCKETLER 296
Query: 293 RKG--AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
K A+Y E WHADI + ++ + + + ++ ALW+PD FM RV+ + WS
Sbjct: 297 PKSIKGVAIYCELWHADIMKIIDQIRKTTIADIKLKNSQLALWIPDEFMRRVENDQMWSF 356
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKA--KKVVQAQNLWFEILTSQIETGTPYMLFK 408
P+ GL D G EF+ LY YE + K+ + ++A+ LW +I+ SQIETG P +LFK
Sbjct: 357 MSPDHCPGLIDVHGEEFDNLYKEYELKSKSFVMRQIEAKKLWSQIIQSQIETGLPLLLFK 416
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D CN KSN+ +LGTI+ + + +++T+ E A C ASI++ F+ +++
Sbjct: 417 DACNAKSNESHLGTIQCAGRNGDTVQFTASDEVATCTTASISVDMFLTSENI-------- 468
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL----RHRPIGIGV 524
FDF KL E +T +LNKII+ N + + L IGIG+
Sbjct: 469 -----------FDFSKLKETAKKITYDLNKIIENNNVILNKEDQLKLGLKQNQLAIGIGI 517
Query: 525 QGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGI 584
QGLAD FI + F++ EA+ LN I ETIYY AL+ S E+A+K GPY+TY NSP SKG+
Sbjct: 518 QGLADLFIKMRYPFDNKEARYLNIQIHETIYYGALEASCELASKNGPYKTYPNSPTSKGL 577
Query: 585 LQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
LQ D+WNV PS+ WDW L+ I+++G+RNSL+ T S I GN EP +N+
Sbjct: 578 LQFDLWNVKPSNLWDWNSLKTKIAQHGLRNSLVTVTSNTEVESTIFGNVNSIEPLDTNVK 637
Query: 645 SRRVLSG-----EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIY 699
R + G E VVN +LL DL + +W + +++ + GS+Q+I +P++LK +Y
Sbjct: 638 RRYISLGESKPKEIQVVNPYLLKDLHDRKLWDEKLIPELVNNMGSIQEI-NLPDDLKQLY 696
Query: 700 KTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLR 759
+T WEI Q LV MA DR +IDQSQ+ +++M + N ++ +H TW GLKTG+ LR
Sbjct: 697 RTKWEIDQKVLVTMAADRAPFIDQSQAFSLNMVKANEDIISEMHISTWKMGLKTGVCQLR 756
Query: 760 SRAAADAIK 768
+ + ++
Sbjct: 757 IKQTEEDLR 765
>gi|117928931|ref|YP_873482.1| ribonucleoside-diphosphate reductase subunit alpha [Acidothermus
cellulolyticus 11B]
gi|117649394|gb|ABK53496.1| ribonucleoside-diphosphate reductase, alpha subunit [Acidothermus
cellulolyticus 11B]
Length = 781
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 321/817 (39%), Positives = 470/817 (57%), Gaps = 45/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ + L+ DP+ V+ K +G+Y G TT++LD L+
Sbjct: 1 MRVRKRNGDTEPVDVNKIVRAVERWADDLT--DVDPLRVATKTISGLYDGATTAELDRLS 58
Query: 61 AETAAAMTTNHPDYASLAARIAVS----NLHKNTKKSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + +H SFS++I G LI
Sbjct: 59 IQTAAELIAEEPQYSKLAARLLAAYIEKEVHNQGIASFSQSIA---------LGHAEGLI 109
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
D+ + NA D I D ++YFG +T+ YLL+ V+E PQ+ L+RV
Sbjct: 110 GDETARFVKDNARKFDFAIDPKGDQRFEYFGLRTVYDRYLLRHPTSRLVIETPQYFLLRV 169
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + + AI+ Y +MS+ + +S TLFN+GT PQ+SSC+LV D ++ IY
Sbjct: 170 ACGLARTPAE-AIEFYRLMSELAYLPSSATLFNSGTRHPQMSSCYLVDSPRDELDSIYAR 228
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG+ +R+ G+ IRGTNG SNGIVP L+ + + V+QGG +RK
Sbjct: 229 YHQVARLSKFAGGIGIGFSRVRSRGALIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRK 287
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWH DI EFL L+ N G++ R +L A W+PD FM RV+ + WSL P+
Sbjct: 288 GAACVYLEPWHPDIEEFLELRDNTGEDARRTYNLNLANWIPDEFMRRVEADELWSLIDPD 347
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
+A L D WGA+F+ Y E EG+ + V+A++L+ +++ + ETG +M FKD CN K
Sbjct: 348 QAPELVDLWGADFDAAYRRAEAEGRYVRQVRARDLYAKMMRTLAETGNGWMTFKDACNAK 407
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
NQ + SNLCTEI+E E AVCNL SI L R VR+ V
Sbjct: 408 CNQTGRPGNVVHLSNLCTEIVEVNRDDEIAVCNLGSINLARHVRDGAV------------ 455
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+++L I L++++D+N+YP A RSN + RPIG+GV GL D F
Sbjct: 456 --------DWDRLRRTVQIAVPLLDRVVDINFYPTPEAARSNEKWRPIGLGVMGLQDVFF 507
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F+S EA +L+ I E IY AL+ S+E+AA+ GP+ + + + G LQPD+W V
Sbjct: 508 ALRLPFDSGEALELSTRIAEEIYLTALEVSAELAAEYGPHPAFPETRAAAGYLQPDLWGV 567
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+ + + +++ I+ G+RNSLL+A PTA+ + I G E EP SN++ R LSGE
Sbjct: 568 TPTQQERYAAIKERIAAVGLRNSLLIAIAPTATIASIAGCYESIEPMVSNLFKRETLSGE 627
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN L+++L G+W+ I+ I DGSVQ + +PEE++ +++T WE+ Q L+D
Sbjct: 628 FLQVNTALVNELKTRGLWTKEIREAIKRADGSVQGLTVLPEEVRRVFRTAWELPQKALID 687
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+A RG YIDQSQSLN+ M P K++S++ W+ GLKT YYLRSR A + TV
Sbjct: 688 LAAARGPYIDQSQSLNLFMAAPTISKLSSMYRYAWASGLKT-TYYLRSRPATRIQQATVT 746
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ + +++ + T CSL N E C C
Sbjct: 747 VT---SSDDVRDVMANPSTSKPATSCSLENPETCEVC 780
>gi|238061573|ref|ZP_04606282.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
sp. ATCC 39149]
gi|237883384|gb|EEP72212.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
sp. ATCC 39149]
Length = 792
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/811 (40%), Positives = 472/811 (58%), Gaps = 55/811 (6%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
+G E V +KI +++ L + DP+ V+ K +G+Y G TT++LD+L+ +TAA
Sbjct: 28 NGDAEPVDVNKIVKAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDKLSIQTAAE 85
Query: 67 MTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDIYE 122
+ + P Y+ LAAR+ + + K + SFS++++ Y H GL LI DD
Sbjct: 86 LISEEPQYSKLAARLLAAYVDKEVRGQQVASFSQSVR--YAH-----GLG--LIGDDTAA 136
Query: 123 IIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRVSIGIHK 180
+ +NA LD + D ++YFG +T+ YLL+ VVE PQ+ L+RV+ G+ +
Sbjct: 137 FVARNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRQPESRLVVETPQYWLLRVACGLSE 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+ AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IYE + A
Sbjct: 197 TPAE-AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYERYHQVAK 255
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SK +GGIG++ +R G+ IRGTNG SNGIVP L+ + V+QGG +RKGA VY
Sbjct: 256 LSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRKGAACVY 314
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH DI EFL L+ N G+E R +L A W+PD FM RV+ +G WSL P++A L
Sbjct: 315 LEPWHPDIEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADGDWSLIDPSDAPELP 374
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D +G EF+ Y E+ KA + V+A++L+ ++ + +TG +M FKD NR SNQ +
Sbjct: 375 DLYGEEFDAAYRIAEK--KAIRTVKARDLYGRMMRTLAQTGNGWMTFKDPSNRLSNQTGV 432
Query: 421 --GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
TI SNLCTEI+E S TETAVCNL SI L V V
Sbjct: 433 PGNTIHLSNLCTEILEVNSDTETAVCNLGSINLGAHVTVDGV------------------ 474
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
D+ KL L+++ID+NYYP A SN R RP+G+G+ GL D F L + F
Sbjct: 475 --DWVKLRSTVRTAVVFLDRVIDINYYPATQAAASNPRWRPVGLGLMGLQDAFFTLRLPF 532
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRW 598
+S A++L+ + E I+ AL+TS+ ++ + GP+ Y + ++G L PD+W V P+
Sbjct: 533 DSAAARELSTRVQEEIFLTALETSAGLSERFGPHPAYAETRAARGELHPDLWGVEPTQTE 592
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
W LR I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGEF+ +N
Sbjct: 593 RWAALRATIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGEFLQINT 652
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
+L+ +L G+W+P I+++I +GSVQ I ++P +++ +++T WE+ Q TL+D+A R
Sbjct: 653 YLVRELKAHGLWTPQIRDQIKRAEGSVQGIDDLPADVRELFRTAWELPQRTLIDLAAARA 712
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
YIDQSQSLN+ + P K++S++ W GLKT YYLRSR A + TV
Sbjct: 713 PYIDQSQSLNLFLSAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVAV----- 766
Query: 779 KPEKPELVVDDETKMAQVVCSLTNREECMAC 809
KP + V D +A CSL N E C AC
Sbjct: 767 ---KPVVAVSDTEALA---CSLENPESCEAC 791
>gi|315506489|ref|YP_004085376.1| ribonucleoside-diphosphate reductase subunit alpha [Micromonospora
sp. L5]
gi|315413108|gb|ADU11225.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
sp. L5]
Length = 798
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/817 (39%), Positives = 469/817 (57%), Gaps = 49/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KRDG E V KI +++ L + DP+ V+ K +G+Y G TT++LD L+
Sbjct: 22 MRVRKRDGDTEPVDVGKIVRAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDRLS 79
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + + K + SFS++I Y H GL LI
Sbjct: 80 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQGVASFSQSIA--YAH-----GLG--LI 130
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
D+ + ++A LD + D D ++YFG +T+ YLL+ Q + VVE PQ+ L+RV
Sbjct: 131 GDETAAFVARHARKLDDAVDPDGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 190
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + A+ Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IYE
Sbjct: 191 ACGLSRTP-GEAVGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYER 249
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 250 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 308
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWH D+ EFL L+ N G+E R +L A WVPD FM RV+ +G+WSL P+
Sbjct: 309 GAACVYLEPWHPDVEEFLELRDNTGEESRRTHNLNLANWVPDEFMRRVEADGEWSLVDPS 368
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
+A L D +G F+ Y E+ A + V+A++L+ ++ + +TG +M FKD NR
Sbjct: 369 DAPELPDLYGEAFDAAYRAAEK--NAVRTVRARDLYGRMMRTLAQTGNGWMTFKDAANRL 426
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E ETAVCNL S+ L V V
Sbjct: 427 SNQTGEPGNVIHLSNLCTEILEVNDDAETAVCNLGSVNLGAHVTADGV------------ 474
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+E+L L+++ID+NYYP E A SN R RP+G+G+ GL D F
Sbjct: 475 --------DWERLRATVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 526
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F+S +A++L+ + E I AL+TS+ +A + GP+ Y + +KG L PD+W
Sbjct: 527 TLRLPFDSAQAKELSTRVQEEILLTALETSAGLAERFGPHPAYPQTRAAKGDLHPDLWGA 586
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+ W LR+ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 587 EPAQAGRWAALRERIAVHGLRNSLLVAIAPTATIASIAGCYECVEPQVSNLFKRETMSGE 646
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN +L+ +L G+W+P ++++I +GSVQ I E+P ++ +++T WE+ Q L+D
Sbjct: 647 FLQVNTYLVRELKARGLWTPQVRDRIKRAEGSVQDITELPAPVRELFRTAWELPQRALID 706
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+A R ++DQSQSLN+ + P K++S++ W GLKT YYLRSR A + TV
Sbjct: 707 LAAARAPFVDQSQSLNLFLSAPTIGKLSSMYLYAWKAGLKT-TYYLRSRPATRIQQATV- 764
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
V V DDE + CSL N E C AC
Sbjct: 765 APVLAPVSGVVSAVSDDEA----LACSLENPESCEAC 797
>gi|302867101|ref|YP_003835738.1| ribonucleoside-diphosphate reductase subunit alpha [Micromonospora
aurantiaca ATCC 27029]
gi|302569960|gb|ADL46162.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
aurantiaca ATCC 27029]
Length = 798
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/817 (39%), Positives = 469/817 (57%), Gaps = 49/817 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KRDG E V KI +++ L + DP+ V+ K +G+Y G TT++LD L+
Sbjct: 22 MRVRKRDGDTEPVDVGKIVRAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDRLS 79
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + + K + SFS++I Y H GL LI
Sbjct: 80 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQGVASFSQSIA--YAH-----GLG--LI 130
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
D+ + ++A LD + D D ++YFG +T+ YLL+ Q + VVE PQ+ L+RV
Sbjct: 131 GDETAGFVARHARKLDDAVDPDGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 190
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + A+ Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IYE
Sbjct: 191 ACGLSRTP-GEAVGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYER 249
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 250 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 308
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWH D+ EFL L+ N G+E R +L A W+PD FM RV+ +G+WSL P+
Sbjct: 309 GAACVYLEPWHPDVEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADGEWSLVDPS 368
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
+A L D +G F+ Y E+ A + V+A++L+ ++ + +TG +M FKD NR
Sbjct: 369 DAPELPDLYGEAFDAAYRAAEK--NAVRTVRARDLYGRMMRTLAQTGNGWMTFKDAANRL 426
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + I SNLCTEI+E ETAVCNL S+ L V V
Sbjct: 427 SNQTGEPGNVIHLSNLCTEILEVNDDAETAVCNLGSVNLGAHVTADGV------------ 474
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+E+L L+++ID+NYYP E A SN R RP+G+G+ GL D F
Sbjct: 475 --------DWERLRATVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 526
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F+S +A++L+ + E I AL+TS+ +A + GP+ Y + +KG L PD+W
Sbjct: 527 TLRLPFDSAQAKELSTRVQEEILLTALETSAGLAERFGPHPAYPQTRAAKGDLHPDLWGA 586
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+ W LR+ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 587 EPAQAGRWAALRERIAVHGLRNSLLVAIAPTATIASIAGCYECVEPQVSNLFKRETMSGE 646
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN +L+ +L G+W+P ++++I +GSVQ I E+P ++ +++T WE+ Q L+D
Sbjct: 647 FLQVNTYLVRELKARGLWTPQVRDRIKRAEGSVQDITELPAPVRELFRTAWELPQRALID 706
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+A R +IDQSQSLN+ + P K++S++ W GLKT YYLRSR A + TV
Sbjct: 707 LAAARAPFIDQSQSLNLFLSAPTIGKLSSMYLYAWKAGLKT-TYYLRSRPATRIQQATV- 764
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
V V DDE + CSL N E C AC
Sbjct: 765 APVLAPVSGVVSAVSDDEA----LACSLENPESCEAC 797
>gi|392558225|gb|EIW51419.1| alpha subunit of ribonucleoside diphosphate reductase [Trametes
versicolor FP-101664 SS1]
Length = 838
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 302/747 (40%), Positives = 457/747 (61%), Gaps = 42/747 (5%)
Query: 28 GLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLH 87
G TEH ++ + GV +++ + ELAA TAA T+HP Y LA R+ +N+H
Sbjct: 38 GRLTEHNG---IASAITHGVQAAMSSHDIQELAALTAANFNTHHPQYNILAGRLVAANIH 94
Query: 88 KNTK-KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDY 145
K + FS+ + ER + P + D+ + + LD+ ++ DRDF Y
Sbjct: 95 KVVPIRRFSDNV--------ERIVAEHPGLLDETFVANARRYGEQLDNMLMQDRDFGMPY 146
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTL 205
K +E+SYLL+V ++ERPQH MRV++ ++ +DI++ +TY+M+S+R +THASPT+
Sbjct: 147 PCIKLMEQSYLLRVGDAILERPQHAYMRVALALNANDINAIEETYNMLSRRAYTHASPTM 206
Query: 206 FNAGTPRPQLSSCFLVCMK----DDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
FNAG L SCF+ + D+I+G+ + + A + S GIG+ + + A Y
Sbjct: 207 FNAGLSDQALISCFVQSAEYTSTPDAIKGMMQASE--AFLKNS--GIGIGLDKVPA---Y 259
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
N G++ +L ++ A + KR A + WHAD+ + +N+++ +
Sbjct: 260 RPDANPPQPGVIALLNMYQQVAEFTTDARSKRPSAATAVIPIWHADVTKVINIRRGNVLG 319
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAK 381
+ RD++ ALW+ DLFM RVQ N WSLF P +A LA+ +GA FE YT E+ +
Sbjct: 320 QAPLRDIYPALWIADLFMRRVQENVYWSLFDPADAPQLAELYGAAFEAEYTQLEQSNIQR 379
Query: 382 KVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTET 441
V A++L+++I+ QI +GTPY+++ D N K+NQ +LGTI+++NLCTEI++++S T T
Sbjct: 380 VTVLARSLFYQIVVMQIRSGTPYIMYADAINAKNNQSHLGTIRATNLCTEIVQFSSRTRT 439
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
VC L+S++LP FV S + FDF+ L T + T ++++D
Sbjct: 440 PVCALSSLSLPAFV------------------SSDDHTFDFDALHHATKVATRCTDRVLD 481
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N YP AR S + R IG+GVQGLAD F ++G+ + S EA++LN IFETIY+ AL+
Sbjct: 482 INDYPSPEARASAVETRAIGVGVQGLADVFRMMGIPYGSDEARRLNVSIFETIYHGALEE 541
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
SSE+A + GP+ ++ SP S+G+LQ DMWN PSDR+D+ LR I+K+G+RNS+L A M
Sbjct: 542 SSEMAERFGPFPAWNRSPASQGVLQCDMWNCTPSDRYDFDALRARIAKHGLRNSMLTAVM 601
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PT+STSQ+LGNN+ EPY SNIY+RR L GE+ ++ HL+ +L G+W+P ++ +II
Sbjct: 602 PTSSTSQLLGNNDSVEPYVSNIYTRRALGGEYHIICPHLVQELERRGLWTPHMRRQIIDA 661
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
GSVQ I IP+ LK +Y+T WE+ Q V MA DRG YIDQSQS++++M P + +
Sbjct: 662 RGSVQNITTIPDRLKAVYRTAWEMPQRYTVIMAADRGPYIDQSQSMSLYMRNPTAAALYT 721
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIK 768
H +W GLKTGMYYLR+ A A++
Sbjct: 722 AHMYSWQAGLKTGMYYLRTTAPTYAMQ 748
>gi|256825984|ref|YP_003149944.1| ribonucleoside-diphosphate reductase subunit alpha [Kytococcus
sedentarius DSM 20547]
gi|256689377|gb|ACV07179.1| ribonucleoside-diphosphate reductase, alpha subunit [Kytococcus
sedentarius DSM 20547]
Length = 875
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 328/857 (38%), Positives = 476/857 (55%), Gaps = 66/857 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M VVKR G E V KI A +++ GL DP+ V+ K +G+Y G TT++LD+LA
Sbjct: 36 MRVVKRSGEHEQVDVTKIVAAVERCCDGLP--EVDPLRVATKTISGLYDGATTAELDKLA 93
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA MT P Y+ LA R+ + K + SFS + R+G + LI
Sbjct: 94 IATAAEMTATEPQYSRLAGRLLAGVIDKEVRGQGIGSFSAAV---------RTGHEQGLI 144
Query: 117 ADDIYEIIMKNAACLDSEIIYDR----DFDYDYFGFKTLERSYLLK--VQGKVVERPQHM 170
D+ + ++A+ LD + + D+ +DYFG +T+ YLL+ + VVE PQ+
Sbjct: 145 GDETAAFVAEHASRLDDAVYRAQAAHADWRFDYFGLRTVYDRYLLRHPLTRAVVESPQYW 204
Query: 171 LMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
LMRVS G+ + A++ + ++S + +SPTLFN+GT Q+SSC+L+ D ++
Sbjct: 205 LMRVSAGLSHTG-EEAVEFFELLSSLAYLPSSPTLFNSGTRHTQMSSCYLIDSPQDDLDS 263
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
IYE + A +SK AGGIG++ IR+ G+ IRGTNG SNGIVP LR + + V+QGG
Sbjct: 264 IYERYHQVAKLSKFAGGIGLAFSRIRSRGALIRGTNGHSNGIVPWLRTLDASVAAVNQGG 323
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
+RKGA +YLEPWH D+ EFL L+ N G++ R +L A W+PD FM RV+ +GQWSL
Sbjct: 324 -RRKGAACIYLEPWHPDVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVEADGQWSL 382
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDT 410
P+ L D WG F+ Y E G + V A+ L+ ++ + +TG +M FKD
Sbjct: 383 IDPDAVPELPDLWGPAFDAAYRAAEERGDVVRTVSARYLYGRMMRTLAQTGQGWMTFKDA 442
Query: 411 CNRKSNQQNL---------GTIKS------SNLCTEIIEYTSPTETAVCNLASIALPRFV 455
NR NQ + GT++ SNLCTEIIE TS ETAVCNL S+ L +
Sbjct: 443 SNRACNQTSDDQTPRVAADGTVQPAPVVHLSNLCTEIIEVTSNDETAVCNLGSVNLAAHL 502
Query: 456 REKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL 515
+ D P+ ++ D ++L + L+++ID+NYYP E A SN
Sbjct: 503 QWSDGTTGVRPT----DPAARATGIDTDRLRSTVRLAVTYLDRVIDINYYPSEQAAASNP 558
Query: 516 RHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETY 575
R RPIG+G GL D F L M F++PEA++L+ I E I AL+ S+E+A + G + +
Sbjct: 559 RWRPIGLGSMGLQDVFFALRMPFDAPEAKELSTRIAEEIQLSALERSAELAEQFGAHPAF 618
Query: 576 HNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+ ++G LQ D+ V P+ W +R I+ +G+RNSL++A PTA+ + I G EC
Sbjct: 619 AETRAARGQLQHDLQGVEPTQTERWAAVRQRIADHGLRNSLMIAIAPTATIASIAGCYEC 678
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP SN++ R LSGEF+ VN L+ +L +G+W+ ++ K+ D+GSV I ++PEE
Sbjct: 679 IEPQVSNLFKRETLSGEFMQVNTALVGELKSLGLWTEAVREKLKADNGSVAGIADLPEET 738
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ +++T WE+ Q L++MA R Y+DQSQSLN+ M+ PN K++S++ W GLKT
Sbjct: 739 RRLFRTAWELPQKALIEMAAARQAYVDQSQSLNLFMESPNIGKLSSMYLYAWKAGLKT-T 797
Query: 756 YYLRSRAAADAIKFTV---------------DTSVFKEKPEKPELV--------VDDETK 792
YYLRSR A + TV + P P +V V T
Sbjct: 798 YYLRSRPATRIQQATVAGVRAGASWGAATGAPGASQPTAPGSPGVVGGLTASEPVRTFTD 857
Query: 793 MAQVVCSLTNREECMAC 809
+ CSL N E C AC
Sbjct: 858 EEALACSLENPEACEAC 874
>gi|328722126|ref|XP_003247490.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 767
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/777 (41%), Positives = 462/777 (59%), Gaps = 45/777 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAG-VYKGVTTSQLDEL 59
++V KRDG E VH+D ITAR+K+L YGL E DP + V +Y G+TTSQLD+
Sbjct: 8 LHVQKRDGTIEKVHYDAITARIKQLCYGL--EKIDPAATAIHVIKKFLYAGITTSQLDDA 65
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERS-GLKAPLIAD 118
AAETA M T HPDY LAARIA+SNLHK TK+ FS+ I D++ +YN + GL +D
Sbjct: 66 AAETAITMATIHPDYEKLAARIAISNLHKQTKEKFSDVIDDIHKNYNYWNIGL-----SD 120
Query: 119 DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI 178
DIYEIIMK+ L+ I Y+ D+ DYFGFK L + +L+K + + +ERPQH+ M+V++GI
Sbjct: 121 DIYEIIMKHKDRLNEAINYENDYILDYFGFKYLIQHFLVKSENQTIERPQHLFMKVAVGI 180
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLS----SCFLVCMKDDSIEGIYET 234
H DDIDSAI+TY M+SQ+ SP + +L+ S + V M DSI+GIY+T
Sbjct: 181 HGDDIDSAIETYKMLSQK-LCMFSPVVMQLQPAARKLNVSVISHYSVAMIADSIDGIYDT 239
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ-GGGKR 293
+ + + VH IRA G+YI+G+ G S+G+ ML+ ++ R + K
Sbjct: 240 SIRLSSFILPYSSVALHVHKIRAAGTYIQGSYGESSGLPLMLKQYDSIVRNSETLERPKS 299
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
+Y E WHADI + ++ + + + ++ ALW+PD FM RVQ + WS P
Sbjct: 300 IKGVTIYCELWHADIMKVIDQIRMTSIADIKLKNCQLALWIPDEFMRRVQNDQMWSFMSP 359
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKA--KKVVQAQNLWFEILTSQIETGTPYMLFKDTC 411
+ GL D G EF+ LY YE + K+ + ++A+ LW +I+ SQIETG P +LFKD C
Sbjct: 360 DHCPGLIDVHGKEFDNLYKEYELKSKSFVMRQIEAKKLWSQIIQSQIETGLPLLLFKDAC 419
Query: 412 NRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVG 471
N KSN+ +LGTI+ + + +++T+ E A C ASI++ F+ +++
Sbjct: 420 NAKSNESHLGTIQCAGRNGDTVQFTASDEVATCTTASISVDMFLTSENI----------- 468
Query: 472 SRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHR----PIGIGVQGL 527
FDF KL E +T +LNKIID N + ++ L + IGIGVQGL
Sbjct: 469 --------FDFSKLKETAKKLTYDLNKIIDNNNVILNKEKQLELGLKQNQWAIGIGVQGL 520
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
AD FI + F++ EA+ LN I E+IYY AL+ S E+A GPY+T+ NSP SKG+LQ
Sbjct: 521 ADLFIKMKYPFDNKEARVLNTQIHESIYYGALEASCELATTNGPYKTFPNSPTSKGLLQF 580
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
D+WNV PS+ WDW L+ I+++G+RNSL+ T S I G EP +N+ R
Sbjct: 581 DLWNVKPSNLWDWNNLKTKITQHGLRNSLVTVTSNTEVESTICGKVNSIEPLDTNVKRRY 640
Query: 648 VLSG-----EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTV 702
+ G E VVN HLL DL + +W +K +++ + GSVQ+I +PE+LK +YKT
Sbjct: 641 ISLGESKPKEIQVVNPHLLKDLHDRKLWDDNLKYQLMNNMGSVQEIKGLPEDLKQLYKTK 700
Query: 703 WEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLR 759
WEI Q L+ MA DR +IDQSQ+ +++M + + ++ + TW GLKT + LR
Sbjct: 701 WEIDQKDLIIMAADRAPFIDQSQAFSLNMVKADEDIISEMLISTWKMGLKTAVCQLR 757
>gi|159040365|ref|YP_001539618.1| ribonucleoside-diphosphate reductase subunit alpha [Salinispora
arenicola CNS-205]
gi|157919200|gb|ABW00628.1| ribonucleoside-diphosphate reductase, alpha subunit [Salinispora
arenicola CNS-205]
Length = 821
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 330/835 (39%), Positives = 476/835 (57%), Gaps = 62/835 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ L + DP+ V+ K +G+Y G TT++LD L+
Sbjct: 22 MEVRKRNGDTEPVDVNKIVKAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDRLS 79
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + + K + SFS++I+ Y H GL LI
Sbjct: 80 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQQVASFSQSIR--YAH-----GLG--LI 130
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
+DD + +NA LD + D ++YFG +T+ YLL+ Q + VVE PQ+ L+RV
Sbjct: 131 SDDTAAFVSRNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 190
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + + AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IY+
Sbjct: 191 ACGMSRTPAE-AIGFYQLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYQR 249
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 250 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 308
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWH DI EFL L+ N G++ R +L A W+PD FM RV+ +G WSL P+
Sbjct: 309 GAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWSLIDPS 368
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
+A L D +G EF+ Y E+ KA + V+A++L+ ++ + +TG +M FKD N
Sbjct: 369 DAPELPDLYGDEFDAAYRVAEK--KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDRSNTL 426
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ Q TI SNLCTEI+E + TETAVCNL S+ L V V
Sbjct: 427 SNQTGQPANTIHLSNLCTEILEVNNDTETAVCNLGSVNLGAHVTVDGV------------ 474
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+EKL L+++ID+NYYP E A SN R RP+G+G+ GL D F
Sbjct: 475 --------DWEKLRATVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 526
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F+S EA +L+ + E I+ AL+TS+ +A + GP+ Y + ++G L PD+W
Sbjct: 527 TLRLPFDSAEASELSTRVQEEIFLTALETSAGLAERFGPHPAYAETRAARGDLHPDLWGA 586
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+ W L+ I+++G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 587 TPTQTRRWAGLKARIAEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 646
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN +L+ +L G+W+ I+++I +GSVQ + E+P E++ +++T WE+ Q L+D
Sbjct: 647 FLQVNTYLVGELKARGLWTAQIRDQIRRAEGSVQGLGELPAEVRELFRTAWELPQRALID 706
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAAD------A 766
+A R YIDQSQSLN+ + P K++S++ W GLKT YYLRSR A A
Sbjct: 707 LAAARAPYIDQSQSLNLFLAAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVA 765
Query: 767 IKFTVDTSVFKEKPEKPELV------------VDDETKMAQVVCSLTNREECMAC 809
+ TV V +P + T + CSL N E C AC
Sbjct: 766 VTPTVPPGVADASSAQPGVAPGLSGAAASSASGVAGTDAEALACSLENPESCEAC 820
>gi|145596897|ref|YP_001161194.1| ribonucleoside-diphosphate reductase subunit alpha [Salinispora
tropica CNB-440]
gi|145306234|gb|ABP56816.1| ribonucleoside-diphosphate reductase, alpha subunit [Salinispora
tropica CNB-440]
Length = 909
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 325/828 (39%), Positives = 475/828 (57%), Gaps = 55/828 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ L + DP+ V+ K +G+Y G TT++LD L+
Sbjct: 117 MGVRKRNGDTEPVDVNKIVRAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDRLS 174
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + + K + SFS++I+ Y H GL LI
Sbjct: 175 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQQVASFSQSIR--YAH-----GLG--LI 225
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
+D+ + +NA LD + D ++YFG +T+ YLL+ Q + VVE PQ+ L+RV
Sbjct: 226 SDETAAFVSRNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 285
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IY+
Sbjct: 286 ACGLSGTPAE-AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYQR 344
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG++ +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 345 YHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 403
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWH DI EFL L+ N G++ R +L A W+PD FM RV+ +G WSL P+
Sbjct: 404 GAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWSLIDPS 463
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
EA L D +G EF+ Y E+ KA + V+A++L+ ++ + +TG +M FKD N
Sbjct: 464 EAPELPDLYGEEFDAAYRVAEK--KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDRSNTL 521
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ + TI SNLCTEI+E + ETAVCNL S+ L V V
Sbjct: 522 SNQTGEPGNTIHLSNLCTEILEVNNDAETAVCNLGSVNLGAHVTADGV------------ 569
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+EKL + L+++ID+NYYP E A SN R RP+G+G+ GL D F
Sbjct: 570 --------DWEKLRDTVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 621
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F+S EA +L+ + E I+ AL+TS+ +A + GP+ Y + ++G L P++W
Sbjct: 622 TLRLPFDSAEASELSTRVQEEIFLTALETSAGLAERFGPHPAYAQTRAARGDLHPELWGA 681
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+PS W L+ + ++G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 682 VPSQPQRWAGLKARVGEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 741
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ VN +L+ +L G+W+ +I+++I +GSVQ + E+P E++ +++T WE+ Q L+D
Sbjct: 742 FLQVNTYLVGELKARGLWTASIRDQIKRAEGSVQGLAELPAEVRELFRTAWELPQRALID 801
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAAD------A 766
+A R YIDQSQSLN+ + P K++S++ W GLKT YYLRSR A A
Sbjct: 802 LAAARAPYIDQSQSLNLFLAAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVA 860
Query: 767 IKFTVDTSVFKEKPEKPELVVDDETKMA-----QVVCSLTNREECMAC 809
+ T V +P + A + CSL N E C AC
Sbjct: 861 VTSTAQPGVAVASSAQPGGAASSISGFAGTDAEALACSLENPESCEAC 908
>gi|408826316|ref|ZP_11211206.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
somaliensis DSM 40738]
Length = 784
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 314/783 (40%), Positives = 447/783 (57%), Gaps = 43/783 (5%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP V+ G + G ++L ELA E AA + P Y+ LAAR+ +
Sbjct: 36 DPGRVAAAALRGRHAGSDEAELRELATEAAAGLIAEDPAYSRLAARLLARTIADEAAGQG 95
Query: 95 SETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERS 154
+ +G + LIAD +++ ++AA LD+ I + D + YFG +TL
Sbjct: 96 AVAFSASVA-----AGHREGLIADRTADLVARHAARLDAVIDPEADDRFGYFGLRTLYSR 150
Query: 155 YLLK--VQGKVVERPQHMLMRVSIGIHKDDIDSAI----KTYHMMSQRWFTHASPTLFNA 208
YLL+ + KVVE PQH L+RV+ G+ +DD D A+ Y +MS+ + +SPTLFN+
Sbjct: 151 YLLRHPITRKVVETPQHFLLRVACGLAEDDSDRALGEVEALYGLMSRLDYLPSSPTLFNS 210
Query: 209 GTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGT 268
GT PQ+SSC+L+ D ++ IY + A +SK AGGIG+S IRA GS IRGTNG
Sbjct: 211 GTRHPQMSSCYLLDSPQDELDSIYGRYHQVARLSKHAGGIGLSYSRIRARGSLIRGTNGH 270
Query: 269 SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDL 328
SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G++ R +L
Sbjct: 271 SNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARRTHNL 329
Query: 329 FYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQN 388
A WVPD FM RV + +WSLF P++ L D WG EF+ Y E G A++ + A++
Sbjct: 330 NLAHWVPDEFMRRVSDDAEWSLFSPSDVPELVDLWGEEFDAAYRAAEARGLARRTMPARD 389
Query: 389 LWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNL 446
L+ ++ + +TG +M FKD NR +NQ + T+ SSNLCTEI+E T ETAVCNL
Sbjct: 390 LYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHTVHSSNLCTEILEVTDDGETAVCNL 449
Query: 447 ASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYP 506
S+ L FV D+E+L E L++++D+N+YP
Sbjct: 450 GSVNLGAFV--------------------TGGGMDWERLDETVRTAVTFLDRVVDINFYP 489
Query: 507 VETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIA 566
E A RSN R RP+G+GV GL D F L + F+SPEA+ L+ I E I A S+++A
Sbjct: 490 TEEAARSNTRWRPVGLGVMGLQDVFFKLRLPFDSPEARALSTRIAERIMLAAYGASADLA 549
Query: 567 AKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTAST 626
+ GP + + ++G+L PD ++V P+ W LR+ I+ G+RNSLL+A PTA+
Sbjct: 550 ERSGPLPAWDKTRTARGVLHPDHYDVEPAWPERWAALRERIASVGLRNSLLLAIAPTATI 609
Query: 627 SQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQ 686
+ I G EC EP SN++ R LSGEF+ VN +L+ DL E+G+W + + +GSVQ
Sbjct: 610 ASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLKELGVWDAQTREALREANGSVQ 669
Query: 687 KIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRT 746
+P E++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P K++S++
Sbjct: 670 GFTWVPAEVRELYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSSMYAYA 729
Query: 747 WSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREEC 806
W +GLKT YYLRSR A + +V + V ++ V CSL N E C
Sbjct: 730 WKQGLKT-TYYLRSRPATRIARAASAATV--------PVPVQQVSEPDAVACSLENPESC 780
Query: 807 MAC 809
AC
Sbjct: 781 EAC 783
>gi|111184258|gb|ABH08178.1| HSPV074b [Horsepox virus]
Length = 440
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/448 (62%), Positives = 336/448 (75%), Gaps = 23/448 (5%)
Query: 219 FLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FL+ M DDSIEGIY+TLK CA+ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV
Sbjct: 13 FLLNMMDDSIEGIYDTLKRCALISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRV 72
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLF 338
+N+TARY+DQGG KR G A+YLEPWH+DI FL+ KKN G E+HR RDLF ALW+PDLF
Sbjct: 73 YNNTARYMDQGGNKRPGVMAIYLEPWHSDIMAFLDFKKNTGNEKHRTRDLFIALWIPDLF 132
Query: 339 MERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQI 398
M+RV+ +G+WSL C +E SGL + WG EFE+LYT +R+ + + ++A+ +W I+ SQI
Sbjct: 133 MKRVKDDGEWSLMCLDECSGLNNVWGDEFERLYTIRKRK-EIQDYMKARVVWKAIIESQI 191
Query: 399 ETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK 458
ETGTP++L+KD CN+KSNQQNLGTIK SNLCTEII+Y E AVCNLAS+AL FV +
Sbjct: 192 ETGTPFILYKDACNKKSNQQNLGTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDG 251
Query: 459 DVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHR 518
FDF KL +V ++ NLNKIID+NYYP+ A SN RHR
Sbjct: 252 Q--------------------FDFFKLKDVVKVIVRNLNKIIDINYYPIPKAEISNKRHR 291
Query: 519 PIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNS 578
PIGIGVQGLAD FILL F+S EAQ LNK IFET Y AL S E+A KEGPYE+Y S
Sbjct: 292 PIGIGVQGLADAFILLNYPFDSLEAQDLNKKIFET--YGALDASCELAEKEGPYESYVRS 349
Query: 579 PVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
S GILQ D+WNV+PSD W+W L+D I G+RNSLLVAPMPTAST+QIL NNE +P
Sbjct: 350 YASNGILQYDLWNVVPSDLWNWKPLKDKIKTYGLRNSLLVAPMPTASTAQILENNESVKP 409
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
YTSNIY+RRVLSGEF VVN HLL LTE
Sbjct: 410 YTSNIYTRRVLSGEFQVVNPHLLRVLTE 437
>gi|383650824|ref|ZP_09961230.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
chartreusis NRRL 12338]
Length = 785
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/788 (39%), Positives = 445/788 (56%), Gaps = 52/788 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKS 93
DP V+ G S+L ELA E AA + + P Y+ LAAR+ +
Sbjct: 37 ADPGRVAAAALRGRSARADASELRELATEAAAGLISEDPVYSRLAARLLTIGIRAEAASQ 96
Query: 94 ----FSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
F+E++ G + LIAD + +AA LD+ I D + YFG +
Sbjct: 97 GVTRFTESVA---------VGHREGLIADRTAAFVRTHAARLDALIDTAADDRFGYFGLR 147
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ + KVVE PQ+ ++RV+ G+ +DD +D Y +MS+ + +SP
Sbjct: 148 TLHSRYLLRHPITRKVVETPQYFMLRVAAGLAEDDTSRSVDEVAALYGLMSRLDYLPSSP 207
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG++ IRA GS IR
Sbjct: 208 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGIAYSRIRARGSLIR 267
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 268 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 326
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A WVPD FM RV +GQWSLF P++ L D WG EF+ Y E +G A+K
Sbjct: 327 RTHNLNLAHWVPDEFMRRVNADGQWSLFSPSDVPELVDLWGEEFDAAYRAAEAKGLARKT 386
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTET 441
+ A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T ET
Sbjct: 387 LPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTGDGET 446
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L V R G D+E+L E L++++D
Sbjct: 447 AVCNLGSVNLGALV-----------DRSGGD-------IDWERLDETVRTAVTFLDRVVD 488
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN R RP+G+GV GL D F L + F+SPEA++L+ I E I A +
Sbjct: 489 INFYPTEQAGRSNARWRPVGLGVMGLQDVFFKLRLPFDSPEAKRLSTRIAERIMLAAYEA 548
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A + GP + + +KG+L PD ++V P+ W LR+ ++ G+RNSLL+A
Sbjct: 549 SADLAERNGPLPAWEKTRTAKGVLHPDHYDVQPTWPERWAALRERVAATGMRNSLLLAIA 608
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G W + +
Sbjct: 609 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEELKRLGAWDARTREALREA 668
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
+GSVQ IP +++ +Y+T WEI Q L+DMA R ++DQSQSLN+ M+ P K++S
Sbjct: 669 NGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSS 728
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W GLKT YYLRSR A + T + P+ PE V CSL
Sbjct: 729 MYAYAWKSGLKT-TYYLRSRPATRIARAAQATVPVQATPD-PE----------AVACSLE 776
Query: 802 NREECMAC 809
N E C AC
Sbjct: 777 NPESCEAC 784
>gi|383777026|ref|YP_005461592.1| putative ribonucleoside-diphosphate reductase large subunit
[Actinoplanes missouriensis 431]
gi|381370258|dbj|BAL87076.1| putative ribonucleoside-diphosphate reductase large subunit
[Actinoplanes missouriensis 431]
Length = 786
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/817 (39%), Positives = 465/817 (56%), Gaps = 55/817 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ L + DP+ V+ K +G+Y G TT++LD+L+
Sbjct: 16 MQVRKRNGETEPVDVNKIVTAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDKLS 73
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + + + ++ FSE+I R G + LI
Sbjct: 74 IQTAAELIGEEPQYSRLAARLLAAFVEQEVREEGVAGFSESI---------RLGHQQGLI 124
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
+D+ + ++A LD I + ++YFG +T+ YLL+ K V+E PQH L+RV
Sbjct: 125 SDETAAFVAEHATVLDQAIDDANNLRFEYFGLRTVADRYLLRHPTKRTVIETPQHWLLRV 184
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IYE
Sbjct: 185 ACGL-SETPGEAIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPKDELDSIYER 243
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 244 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGKSNGIVPFLKTLDAGVAAVNQGG-RRK 302
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWH DI EFL L+ N G+E R +L A W+PD FM RV+ + WSL P+
Sbjct: 303 GAACVYLEPWHPDIEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADEDWSLIDPS 362
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
+A L D +G EF + Y E+ A K ++A++L+ ++ + +TG +M FKD NR
Sbjct: 363 DAPMLPDLFGDEFTEAYRAAEK--NAVKTIKARDLYGRMMRTLAQTGNGWMTFKDPSNRL 420
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ I SNLCTEI+E + ETAVCNL S+ L V V
Sbjct: 421 SNQTGAPGNVIHLSNLCTEILEVNNDAETAVCNLGSVNLGAHVTADGV------------ 468
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+EKL E L+++ID+NYYP + A SN R RP+G+G+ GL D F
Sbjct: 469 --------DWEKLRETVRTAVVFLDRVIDINYYPAQQAAASNPRWRPVGLGLMGLQDAFF 520
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F+S EA++L+ + E I+ AL++S+ +A + GP+ Y + +KG L P +W
Sbjct: 521 TLRLPFDSAEARELSTRVQEEIFLTALESSAALAERFGPHPAYPETRAAKGDLHPYLWGA 580
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
PS W +++ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 581 EPSQNARWAAVKERIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 640
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ +N +L+ +L +W+ I+ I +GSVQ I E+P +++ +++T WE+ Q L+D
Sbjct: 641 FLQINTYLVRELKSRNLWTAGIREAIKRAEGSVQGIAELPADVRELFRTAWELPQRALID 700
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
+A R YIDQSQSLN+ M P KV+S++ W GLKT YYLRSR A + TV
Sbjct: 701 LAAARAPYIDQSQSLNLFMAAPTIGKVSSMYLYAWKAGLKTS-YYLRSRPATRIQQATVS 759
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P ++ VCSL N E C AC
Sbjct: 760 VA--------PSVI---PALTPAEVCSLENPESCEAC 785
>gi|86261680|emb|CAC17629.2| class I ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces jumonjinensis]
Length = 811
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 307/789 (38%), Positives = 449/789 (56%), Gaps = 52/789 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK-- 92
DP V+ G + G ++L LA + AA + + P Y+ LAAR+ + +
Sbjct: 60 DPGRVAAAALRGRHAGSDAAELRGLATDAAAGLISEDPAYSRLAARLLTRTIADEAEGQG 119
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
SFS ++ G LIAD + +AA LD+ I D + YFG +T
Sbjct: 120 AVSFSASVA---------VGFAEGLIADRTAAFVTLHAARLDALIDPAADDRFGYFGLRT 170
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + +V+E PQH ++RV+ G+ +DD +D Y +MS+ + +SPT
Sbjct: 171 LYSRYLLRHPITRQVIETPQHFMLRVACGLAEDDSTRALDEVAALYRLMSRLDYLPSSPT 230
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S +RA GS IRG
Sbjct: 231 LFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRVRARGSLIRG 290
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD+ EFL L+ N G++ R
Sbjct: 291 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADVEEFLELRDNTGEDARR 349
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A W+PD FM RV+ + WSLF P++ L D WG +F+ Y E G A+K +
Sbjct: 350 THNLNLAHWIPDEFMRRVEADTAWSLFSPSDVPELVDLWGDDFDTAYRRAEAAGLARKTM 409
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ L T+ SSNLCTEI+E T ETA
Sbjct: 410 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGRTVHSSNLCTEILEVTDDAETA 469
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L FV + D+ D+E+L L++++D+
Sbjct: 470 VCNLGSVNLAAFVTQDDI--------------------DWERLDATVRTAVTFLDRVVDI 509
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP E A RSN R RP+G+G GL D F L + F+SP A+ L+ I E I A + S
Sbjct: 510 NFYPTEQAGRSNNRWRPVGLGAMGLQDVFFQLKLPFDSPAARTLSTRIAERIMLAAYEAS 569
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIP--SDRWDWGVLRDMISKNGVRNSLLVAP 620
+++A + GP ++ + + G+L PD +N P DRW+ LR+ I+ G+RNSLL+A
Sbjct: 570 ADLAERHGPLPAWNETRTAHGVLHPDHYNTTPHWPDRWN--ALRERIAATGLRNSLLLAI 627
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W T + +
Sbjct: 628 APTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNTYLVQELKNLGVWDATTREALRD 687
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
+GS+Q ++P +++ +Y+T WEI Q L+DMA R Y+DQSQSLN+ ++ P K++
Sbjct: 688 ANGSIQNFTQVPADVRELYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIGKLS 747
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSL 800
S++ W +G+KT YYLRSR A + +T+ P + +D V CSL
Sbjct: 748 SMYAYAWKQGIKT-TYYLRSRPATRIARAASNTNAGATVPVPAQTTPED-----AVACSL 801
Query: 801 TNREECMAC 809
N E C AC
Sbjct: 802 ENPESCEAC 810
>gi|443290855|ref|ZP_21029949.1| Ribonucleoside-diphosphate reductase large chain [Micromonospora
lupini str. Lupac 08]
gi|385886410|emb|CCH18023.1| Ribonucleoside-diphosphate reductase large chain [Micromonospora
lupini str. Lupac 08]
Length = 797
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 314/815 (38%), Positives = 461/815 (56%), Gaps = 49/815 (6%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V KRDG E V K+ A +++ + L DP+ V+ + +G+Y G TT++LD L +
Sbjct: 23 VRKRDGASEPVDVRKLAATVERWADDLP--DVDPLRVATRTISGLYDGATTAELDRLTIQ 80
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIAD 118
TAA + P Y+ LAAR+ S++ + ++ SFS I R+G LI D
Sbjct: 81 TAAELIGTEPQYSRLAARLLASHVEREVRRQGVTSFSAAI---------RAGHAQGLIGD 131
Query: 119 DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSI 176
+ + + LD + D D ++YFG +T+ YLL+ V+E PQ+ L+RV+
Sbjct: 132 ETAAFVAAHGRALDDAVDADGDRRFEYFGLRTVYDRYLLRHPTTRLVLETPQYWLLRVAC 191
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
G+ + D A+ Y +MS + +SPTLFNAGT Q+SSC+LV D ++ IY+
Sbjct: 192 GLSRTP-DEAVDFYRLMSSLAYLPSSPTLFNAGTRHTQMSSCYLVDSPRDELDSIYQRYA 250
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
+ A +SK AGGIG++ +R+ G+ IRGTNG SNGIVP LR + + V+QGG +RKGA
Sbjct: 251 QVANLSKFAGGIGIAYSRVRSRGALIRGTNGQSNGIVPWLRTLDASVAAVNQGG-RRKGA 309
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
VYLEPWH DI EFL L+ N G++ R +L A W+PD FM RV+ + WSLF P+E
Sbjct: 310 ACVYLEPWHPDIEEFLQLRDNTGEDARRTHNLNLANWIPDEFMRRVEADEVWSLFDPDEV 369
Query: 357 SGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSN 416
L D WG F+ Y E +G+ + + A+ L+ +++ + +TG +M FKD NR N
Sbjct: 370 PELPDLWGERFDAAYRAAEAQGRYVRQLPARELYGKMMRTLAQTGNGWMTFKDAANRLCN 429
Query: 417 Q--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRG 474
Q + + SNLCTEI+E +S ETAVCNL S+ + + + +
Sbjct: 430 QTAEPGNVVHLSNLCTEIVEVSSDAETAVCNLGSVNVAAHLTDDGI-------------- 475
Query: 475 SKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILL 534
D+ +L L+++ID+NYYP A SN R RP+G+G+ GL D F L
Sbjct: 476 ------DWPRLRATVRTAVTFLDRVIDINYYPTPQAAASNPRWRPVGLGLMGLQDVFFAL 529
Query: 535 GMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP 594
+ F+SP A++L+ I E +Y AL+TS+++A G + Y + ++G LQPD+W V
Sbjct: 530 RLPFDSPAARELSTRISEELYLTALETSADLARDFGAHPAYAQTRAARGQLQPDLWGVDG 589
Query: 595 SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
+ W LR + G+RNSLLVA PTA+ + I G EC EP SN++ R LSGEF+
Sbjct: 590 TQTARWAALRQRVGAYGLRNSLLVAVAPTATIASIAGCYECVEPQVSNLFKRETLSGEFL 649
Query: 655 VVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMA 714
VN L+ +L G+W+ I++ I +GSVQ + E+P +++ +++T WE+ Q L+D+A
Sbjct: 650 QVNTALVRELKARGLWTEQIRSAIRRAEGSVQDVTELPADVRELFRTAWELPQRALIDLA 709
Query: 715 VDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
R +IDQSQSLN+ + P K++S++ W GLKT YYLRSR A + TV S
Sbjct: 710 AARAPFIDQSQSLNLFLASPTIGKLSSMYLYAWKTGLKT-TYYLRSRPATRIQQATV--S 766
Query: 775 VFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
P + VD E + CSL N E C AC
Sbjct: 767 AVTPVAVGP-VAVDAEA----LACSLENPESCEAC 796
>gi|290957505|ref|YP_003488687.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
scabiei 87.22]
gi|260647031|emb|CBG70130.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
scabiei 87.22]
Length = 802
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/794 (39%), Positives = 447/794 (56%), Gaps = 53/794 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQ----LDELAAETAAAMTTNHPDYASLAARIAVSNLHKN 89
DP V+ G T++ L ELA E AA + + P Y+ LAAR+ +
Sbjct: 43 ADPGRVAAAALRGRSSRAATAEMVAELRELATEAAAGLISEDPAYSKLAARLLAIGIRAE 102
Query: 90 TKK----SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDY 145
+F+E+I G + L+AD E + + A LD+ + D + Y
Sbjct: 103 AASQGVTTFTESIA---------VGHREGLVADRTAEFVRVHGARLDALVDPAGDDRFGY 153
Query: 146 FGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFT 199
FG +TL YLL+ + KVVE PQH ++RV+ G+ +DD +D Y +MS+ +
Sbjct: 154 FGLRTLHSRYLLRHPLTRKVVETPQHFMLRVASGLAEDDTPRAVDEVSALYGLMSRLDYL 213
Query: 200 HASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATG 259
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IR+ G
Sbjct: 214 PSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRG 273
Query: 260 SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHG 319
S IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G
Sbjct: 274 SLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTG 332
Query: 320 KEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGK 379
++ R +L A W+PD FM RV + QWSLF P + L D WG EFE Y E G
Sbjct: 333 EDARRTHNLNLAHWIPDEFMRRVNADEQWSLFSPADVPELVDLWGEEFEAAYRKAEANGL 392
Query: 380 AKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTS 437
A+K + A++L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T
Sbjct: 393 ARKTIAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTD 452
Query: 438 PTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
ETAVCNL S+ L FV R G D+E+L E L+
Sbjct: 453 DGETAVCNLGSVNLGAFV-----------DRAAGD-------LDWERLDETVRTAVTFLD 494
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+++D+N+YP E A RSN R RP+G+G GL D F L + F+SPEA+ L+ I E I
Sbjct: 495 RVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKALSTRIAERIMLA 554
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLL 617
A + S+++A + GP + + ++G+L PD + V P+ W LR+ ++ G+RN+LL
Sbjct: 555 AYEASADLAERNGPLPAWEKTRTARGVLHPDHYGVEPAWSERWAALRERVAATGMRNALL 614
Query: 618 VAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNK 677
+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL E+G+W +
Sbjct: 615 LAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVRDLKELGVWDARTREA 674
Query: 678 IIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFK 737
+ +GSVQ IP +++ +Y+T WEI Q L+DMA R Y+DQSQSLN+ ++ P
Sbjct: 675 LRDSNGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIG 734
Query: 738 KVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPE--LVVDDETKMAQ 795
K++S++ W GLKT YYLRSR A T + + +PE + V T
Sbjct: 735 KLSSMYAYAWKSGLKT-TYYLRSRPA------TRIARAAQGQARQPETTVPVQQATSEEA 787
Query: 796 VVCSLTNREECMAC 809
+ CSL N E C AC
Sbjct: 788 LACSLENPESCEAC 801
>gi|358457764|ref|ZP_09167980.1| ribonucleoside-diphosphate reductase, alpha subunit [Frankia sp.
CN3]
gi|357079044|gb|EHI88487.1| ribonucleoside-diphosphate reductase, alpha subunit [Frankia sp.
CN3]
Length = 837
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 326/827 (39%), Positives = 466/827 (56%), Gaps = 45/827 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V R G E V I + + + L + DP+ V+ + G+Y GV+ +LD+LA
Sbjct: 37 MRVRHRGGTLEPVDVSGIADAVARRADDL--DRVDPLRVASRTIGGLYDGVSAEELDKLA 94
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + + SFSE + + G + LI
Sbjct: 95 VQTAADLIGEEPQYSRLAARLLAALIADEVAGQGITSFSEGVAN---------GHRLGLI 145
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
D + +AA LD+ I D D ++YFG +T+ YLL+ VVE PQ L+RV
Sbjct: 146 GDPTAAFVAAHAAELDALIDPDADRAFEYFGIRTVADRYLLRHPRTRLVVETPQRWLLRV 205
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ D + A + Y +M+ + +SPTLFNAGT PQ+SSCFLV D +E IYE
Sbjct: 206 ACGLSHD-VAEAAELYRLMASLAYLPSSPTLFNAGTAHPQMSSCFLVDSPRDELESIYER 264
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG+ +R+ G+ IRGTNG SNGIVP LR + + V+QGG +RK
Sbjct: 265 YSQVARLSKFAGGIGIGFSRVRSRGALIRGTNGRSNGIVPWLRTLDASVAAVNQGG-RRK 323
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWH DI EFL L+ N G++ R +L A W+PD FM RV+ + WSL P+
Sbjct: 324 GAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLSLAHWIPDEFMRRVRADESWSLMDPD 383
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
E L D WG EF++ Y E G+ + + A++L+ ++ + +TG +M FKD NR
Sbjct: 384 EVPELTDLWGDEFDRAYRAAETAGRYVRQLPARDLYARMMRTLAQTGNGWMTFKDAANRT 443
Query: 415 SNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL------PRFVREKDVPVESHP 466
NQ + I SNLCTEI+E TS ETAVCNL S+ L PR + P
Sbjct: 444 GNQTAEPGNVIHLSNLCTEILEVTSDAETAVCNLGSVNLARHLLAPRLADGDPSTSSTAP 503
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
+ G R D+ L L+++ID+NYYP A SN R RP+G+GV G
Sbjct: 504 TADPGGR------IDWAMLRATVRTAVTFLDRVIDINYYPTGEAAASNPRWRPVGLGVMG 557
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
L D F L + F+S A++L+ + E I AL+ S E+A + GP+ + + ++G+L
Sbjct: 558 LQDVFFALRLPFDSAAARELSTRLSEEIVLTALERSVELAREHGPHPAFAQTRAARGVLH 617
Query: 587 PDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 646
PD ++V PS W LR I ++G+RN LL+A PTA+ + I G EC EP SN++ R
Sbjct: 618 PDHFDVTPSQPARWAALRADIVEHGLRNCLLIAIAPTATIASIAGCYECIEPQVSNVFKR 677
Query: 647 RVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIK 706
LSGEF+ +N +L+ +L G+W+ ++ +I +GSVQ+I E+P++L+++++T WE+
Sbjct: 678 ETLSGEFLQINSYLVEELRGRGLWTAPVRERIRAAEGSVQEIGELPDDLRVLFRTAWELP 737
Query: 707 QMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADA 766
Q L+D+A R YIDQSQSLN+ M PN +++S++ WS GLKT YYLRSR A
Sbjct: 738 QRALIDLAAARTPYIDQSQSLNLFMADPNIGRLSSMYSYAWSSGLKT-TYYLRSRPATRI 796
Query: 767 IKFTVDTSVF----KEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ TV + +E P D + A V CSL N E C AC
Sbjct: 797 QQATVTAATHTIPTQETPR-------DGEEAAAVACSLENPEICEAC 836
>gi|418471849|ref|ZP_13041639.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicoflavus ZG0656]
gi|371547526|gb|EHN75896.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicoflavus ZG0656]
Length = 791
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 312/808 (38%), Positives = 451/808 (55%), Gaps = 52/808 (6%)
Query: 16 DKITARLKKLSYGLSTE--HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPD 73
D A L + GL+ + DP V+ G ++L ELA E AA + + P
Sbjct: 21 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPV 80
Query: 74 YASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAA 129
Y+ LAAR+ + +F++++ +G + LIAD + +AA
Sbjct: 81 YSRLAARLLTIGIRAEAASQGVVAFTDSVA---------TGHREGLIADRTAAFVRLHAA 131
Query: 130 CLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----I 183
LD+ + D + YFG +TL YLL+ + K VE PQH L+RV+ G+ +DD +
Sbjct: 132 RLDALVDPAADDRFGYFGLRTLYSRYLLRHPITRKTVETPQHFLLRVAAGLAEDDTVRSV 191
Query: 184 DSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISK 243
D Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ +Y+ L + A +SK
Sbjct: 192 DEVAALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSK 251
Query: 244 SAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEP 303
AGGIG++ +RA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE
Sbjct: 252 HAGGIGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLET 310
Query: 304 WHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCW 363
WHAD+ EFL L+ N G++ R +L A W+PD FM RV T+G WSLF P + L D W
Sbjct: 311 WHADVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDTDGTWSLFSPADVPELTDLW 370
Query: 364 GAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG-- 421
G EF+ Y E G A++ + A+ L+ ++ + +TG +M FKDT NR +NQ
Sbjct: 371 GEEFDAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGH 430
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
+ SSNLCTEI+E T ETAVCNL S+ L FV P + D
Sbjct: 431 VVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFVD----PAQGD--------------MD 472
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
+E+L L++++D+N+YP E A RSN R RP+G+G GL D F L + F+SP
Sbjct: 473 WERLDATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSP 532
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWG 601
EA+ L+ I E I A +TS+++A ++GP + + ++G+L PD + V P+ W
Sbjct: 533 EAKALSTRIAERIMLAAYETSADLAERDGPLPAWEKTRTAQGVLHPDHYGVEPAWPERWT 592
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR ++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+
Sbjct: 593 ALRARMATTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLV 652
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL +G+W + + +GSVQ IPE+++ +Y+T WEI Q L+DMA R Y+
Sbjct: 653 DDLKRLGVWDARTREALREANGSVQGFSWIPEDVRALYRTAWEIPQRGLIDMAAARTPYL 712
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
DQ+QSLN+ ++ P K++S++ W +GLKT YYLRSR A T + +
Sbjct: 713 DQAQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPA---------TRIARAAGR 762
Query: 782 KPELVVDDETKMAQVVCSLTNREECMAC 809
+ V V CSL N E C AC
Sbjct: 763 ATAVPVQAAPDPEAVACSLENPESCEAC 790
>gi|386842423|ref|YP_006247481.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374102724|gb|AEY91608.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451795716|gb|AGF65765.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 786
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 307/788 (38%), Positives = 444/788 (56%), Gaps = 51/788 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR+ +
Sbjct: 37 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSKLAARLLTLAIRDEAASQ 96
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
SF+E+I G + LIAD E + +A LD+ + D + YFG +
Sbjct: 97 GVSSFTESIA---------VGHREGLIADRTAEFVRLHAERLDALVDRTADDRFGYFGLR 147
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ V KVVE PQH L+RV+ G+ +DD +D Y +MS+ + +SP
Sbjct: 148 TLHSRYLLRHPVTRKVVETPQHFLLRVASGLAEDDTSRSVDEVAALYGLMSRLDYLPSSP 207
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GTP PQ+S+C+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IR
Sbjct: 208 TLFNSGTPHPQMSACYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 267
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 268 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 326
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A W+PD FM RV + QWSLF P + L D WG +F+ Y E G AKK
Sbjct: 327 RTHNLNLAHWIPDEFMRRVNADEQWSLFSPADVPELVDLWGEDFDAAYRKAEAAGLAKKT 386
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTET 441
+ A++L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T+ ET
Sbjct: 387 IAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGNVVHSSNLCTEILEVTNDGET 446
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FV + + D+E+L + L++++D
Sbjct: 447 AVCNLGSVNLGAFV------------------DAASGDIDWERLDQTVRTAVTFLDRVVD 488
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN + RP+G+G GL D F L + F+S EA+ L+ I E I A +T
Sbjct: 489 INFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKALSTRIAERIMLAAYET 548
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A + GP + + ++G+L PD ++V + W LR+ ++ G+RN+L++A
Sbjct: 549 SADLAERNGPLPAWDQTRAARGVLHPDHYDVQFTWPERWAALRERVAAVGMRNALMLAIA 608
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PT++ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 609 PTSTIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVQDLKNLGVWDARTREALRDS 668
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
+GS+Q P IPEE + +Y+T WEI Q L+DMA R Y+DQ QSLN+ M+ P K++S
Sbjct: 669 NGSIQDFPWIPEETRALYRTAWEIPQRGLIDMAAARTPYLDQGQSLNLFMETPTIGKLSS 728
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W GLKT YYLRSR A + T ++ P+ + CSL
Sbjct: 729 MYAYAWKSGLKT-TYYLRSRPATRIARAAQATVPAQQPAPDPD----------AIACSLE 777
Query: 802 NREECMAC 809
N E C AC
Sbjct: 778 NPESCEAC 785
>gi|302558497|ref|ZP_07310839.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseoflavus Tu4000]
gi|302476115|gb|EFL39208.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseoflavus Tu4000]
Length = 796
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/788 (39%), Positives = 442/788 (56%), Gaps = 51/788 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR+ +
Sbjct: 47 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTIGIRAEAASQ 106
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
SF+ ++ +G + LIAD + +A LD+ + D + YFG +
Sbjct: 107 GVTSFTGSVA---------TGHREGLIADRTAAFVRLHAERLDALVDTRADDRFGYFGLR 157
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ V KVVE PQH L+RV+ G+ +DD +D Y +MS+ + +SP
Sbjct: 158 TLHSRYLLRHPVTRKVVETPQHFLLRVAAGLAEDDGARSVDEVAALYGLMSRLDYLPSSP 217
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS IR
Sbjct: 218 TLFNSGTRHPQMSSCYLLDSPQDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGSLIR 277
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 278 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 336
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A WVPD FM RV + WSLF P + GL D WG EF+ Y E +G A++
Sbjct: 337 RTHNLNLAHWVPDEFMRRVDADAPWSLFSPADVPGLVDLWGEEFDAAYRAAEAQGLARRT 396
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTET 441
+ A+ L+ ++ + +TG +M FKDT NR +NQ + + SSNLCTEI+E T ET
Sbjct: 397 LPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 456
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FV + G D+E+L E L++++D
Sbjct: 457 AVCNLGSVNLGAFV-----------DQAAGD-------LDWERLDETVRTAVTFLDRVVD 498
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+NYYP E A RSN R RP+G+G GL D L + F+SPEA+ L+ I E I A +T
Sbjct: 499 INYYPTEQAGRSNARWRPVGLGAMGLQDVLFRLRLPFDSPEAKALSTRIAERIMLAAYET 558
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A + GP + + ++G+L PD ++ + W LR I+ G+RNSLL+A
Sbjct: 559 SADLAERSGPLPAWEKTRTARGVLHPDHYDTELTWPERWAALRARIAAVGMRNSLLLAIA 618
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 619 PTATIASIAGAYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREA 678
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
GSVQ IPE+++ +Y+T WEI Q L+DMA R ++DQ+QSLN+ ++ P K++S
Sbjct: 679 GGSVQDFAWIPEDVRRLYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSS 738
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W +GLKT YYLRSR A + T+V + PE V CSL
Sbjct: 739 MYVHAWKQGLKT-TYYLRSRPATRIARAAARTTVPVQAGPDPE----------AVACSLE 787
Query: 802 NREECMAC 809
N E C AC
Sbjct: 788 NPESCEAC 795
>gi|398782656|ref|ZP_10546370.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
auratus AGR0001]
gi|396996720|gb|EJJ07706.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
auratus AGR0001]
Length = 800
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/794 (39%), Positives = 449/794 (56%), Gaps = 52/794 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK-- 92
DP V+ G + G ++L LA + AA + + P Y+ LAAR+ + +
Sbjct: 39 DPGKVAAAALRGRHAGSDEAELRSLATDAAAGLIGDEPQYSKLAARLLTLAIAEEAAGQG 98
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDS----EIIYDRDFDYDYF 146
SFS ++ +G + LIAD+ E + + A LD+ + D + YF
Sbjct: 99 AVSFSASVA---------TGHREGLIADETAEFVRTHEARLDALVERALADGADDRFGYF 149
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ +V+E PQH L+RV+ G+ +D +D + Y + S +
Sbjct: 150 GLRTLHSRYLLRHPTTRQVIETPQHFLLRVACGLAEDHGERALDDVAELYRLTSSLAYLP 209
Query: 201 ASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS
Sbjct: 210 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 269
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGK 320
IRGTNG SNGIVP LR + + V+QGG +RKGA VYLE WHAD+ EFL L+ N G+
Sbjct: 270 LIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADLEEFLELRDNTGE 328
Query: 321 EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKA 380
E R +L A W+PD FM RV+ + WSLF P++A L D WG +F+ Y E EG+A
Sbjct: 329 EARRTHNLNIAHWIPDEFMRRVEADADWSLFSPSDAPELVDLWGEQFDAAYRRAEAEGRA 388
Query: 381 KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSP 438
K + A+ L+ ++ + +TG +M FKDT NR +NQ + + SSNLCTEI+E T+
Sbjct: 389 VKQIPARVLYSRMMRTLAQTGNGWMTFKDTANRTANQTAEPGQVVHSSNLCTEILEVTND 448
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
ETAVCNL S+ L + + G D+E+L L++
Sbjct: 449 GETAVCNLGSVNLA--------------AHLGNDAGGWEEAMDWERLDATVRTAVTFLDR 494
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
++D+N+YP E A SN R RP+G+G+ GL D F L + F+SPEAQ+L+ I E I A
Sbjct: 495 VVDINFYPTEQAGASNSRWRPVGLGLMGLQDVFFRLRLPFDSPEAQELSTRISERIMLAA 554
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIPSDRW--DWGVLRDMISKNGVRNS 615
+ S+++A + GP+ + + ++G+L PD + N P RW W LR I+ G+RNS
Sbjct: 555 YEASADLAERHGPHPAWSATRTARGVLHPDHYPNAEP--RWADRWAALRSRIALTGMRNS 612
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIK 675
LL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W +
Sbjct: 613 LLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLIEELKALGLWDARTR 672
Query: 676 NKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPN 735
+ + +GSVQ + IPEE++ +Y+T WEI Q L+DMA R Y+DQSQSLN+ M P
Sbjct: 673 DALREANGSVQDVAWIPEEIRALYRTAWEIPQRALIDMAAARTPYLDQSQSLNLFMASPT 732
Query: 736 FKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQ 795
K++S++ W RG+KT YYLRSR A + T+ P+ D E
Sbjct: 733 IGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARGTAAASAP--VPQQAADPEA---- 785
Query: 796 VVCSLTNREECMAC 809
V CSL N E C AC
Sbjct: 786 VACSLENPESCEAC 799
>gi|408529355|emb|CCK27529.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
davawensis JCM 4913]
Length = 781
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 308/788 (39%), Positives = 442/788 (56%), Gaps = 56/788 (7%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR+ ++
Sbjct: 37 ADPGRVAAAALRGRSSRADEAELRELATEAAAGLISEDPAYSRLAARLLTISIAAEAASQ 96
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
SF+E++ G + LIAD E + +A LD+ + D + YFG +
Sbjct: 97 GVVSFTESVA---------VGHREGLIADRTAEFVRIHAERLDALVDSGADDRFGYFGLR 147
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDDIDSAIKT----YHMMSQRWFTHASP 203
TL YLL+ + KVVE PQH ++RV+ G+ +DD A+ Y +MS+ + +SP
Sbjct: 148 TLHSRYLLRHPITRKVVETPQHFMLRVAAGLAEDDTTRALNEVAALYGLMSRLDYLPSSP 207
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IR
Sbjct: 208 TLFNSGTRHPQMSSCYLLDSPMDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 267
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 268 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 326
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A W+PD FM RV + QWSLF P + L D WG EF+ Y E G A+K
Sbjct: 327 RTHNLNLAHWIPDEFMRRVNEDAQWSLFSPADVPELVDLWGEEFDAAYRRAEDAGLARKT 386
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTET 441
+ A++L+ ++ + +TG +M FKD NR +NQ L + SSNLCTEI+E T ET
Sbjct: 387 IAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTALPGHVVHSSNLCTEILEVTDDGET 446
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FV D+ D+E+L L++++D
Sbjct: 447 AVCNLGSVNLGAFVANGDI--------------------DWERLDATVRTAVTFLDRVVD 486
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN + RP+G+G GL D F L + F+SPEA+ L+ I E I A +
Sbjct: 487 INFYPTEQAGRSNAKWRPVGLGAMGLQDVFFQLRLPFDSPEAKALSTRIAERIMLAAYEA 546
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A + GP + + ++G+L PD ++ + W LR I+ G+RNSLL+A
Sbjct: 547 SADLAERNGPLPAWEKTRTAQGVLHPDHYDAELTWPERWAALRSRIAGTGMRNSLLLAIA 606
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL E+G+W + +
Sbjct: 607 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVNDLKELGVWDARTREALREA 666
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
+GSVQ IPE+++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P K++S
Sbjct: 667 NGSVQDFVWIPEDVRRLYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSS 726
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W GLKT YYLRSR A + T ++ + V CSL
Sbjct: 727 MYAYAWKSGLKT-TYYLRSRPATRIARAAQATLPVQQSADA-------------VACSLE 772
Query: 802 NREECMAC 809
N E C AC
Sbjct: 773 NPESCEAC 780
>gi|456388969|gb|EMF54409.1| nrdL protein [Streptomyces bottropensis ATCC 25435]
Length = 774
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/790 (39%), Positives = 445/790 (56%), Gaps = 57/790 (7%)
Query: 42 KVCAGVYKGVTTS--------QLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
+V A +G ++ +L ELA E AA + + P Y+ LAAR+ +
Sbjct: 19 RVAAAALRGRSSRGASAEMIVELRELATEAAAGLISEDPAYSKLAARLLAIGIRDEAASQ 78
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
+F+E+I G + L+AD E +A LD+ + D + YFG +
Sbjct: 79 GVTTFTESIA---------VGHREGLVADRTAEFARVHAERLDALVDPAGDDRFGYFGLR 129
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ + KVVE PQH ++RV+ G+ +DD +D Y +MS+ + +SP
Sbjct: 130 TLHSRYLLRHPLTRKVVETPQHFMLRVASGLAEDDTTRAVDEVAALYRLMSRLDYLPSSP 189
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IR
Sbjct: 190 TLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 249
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 250 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 308
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A W+PD FM RV + QWSLF P + L D WG EFE Y E G A+K
Sbjct: 309 RTHNLNLAHWIPDEFMRRVNADEQWSLFSPADVPELVDLWGEEFEAAYRKAEANGLARKT 368
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTET 441
+ A++L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T ET
Sbjct: 369 IAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 428
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FV R G D+++L E L++++D
Sbjct: 429 AVCNLGSVNLGAFV-----------DRAAGD-------MDWQRLDETVRTAVTFLDRVVD 470
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN R RP+G+G GL D F L + F+SPEA+ L+ I E I A +
Sbjct: 471 INFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKALSTRIAERIMLAAYEA 530
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A + GP + + ++G+L PD ++ P+ W LR+ ++ G+RNSLL+A
Sbjct: 531 SADLAERNGPLPAWEKTRTARGVLHPDHFDARPAWPERWAALREHVATTGMRNSLLLAIA 590
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL E+G+W + +
Sbjct: 591 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVKDLKELGVWDARTREALRES 650
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
GSV+ IP +++ +Y+T WEI Q L+DMA R Y+DQSQSLN+ ++ P K++S
Sbjct: 651 GGSVEDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIGKLSS 710
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPE--LVVDDETKMAQVVCS 799
++ W GLKT YYLRSR A T + + +PE + + T V CS
Sbjct: 711 MYAYAWKSGLKT-TYYLRSRPA------TRIARAAQGQARQPETNIPLQQATSAEAVACS 763
Query: 800 LTNREECMAC 809
L N E C AC
Sbjct: 764 LENPESCEAC 773
>gi|329939693|ref|ZP_08288994.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
griseoaurantiacus M045]
gi|329301263|gb|EGG45158.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
griseoaurantiacus M045]
Length = 811
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 315/794 (39%), Positives = 453/794 (57%), Gaps = 40/794 (5%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G + +L ELA E AA + + P ++ LAAR+ +
Sbjct: 39 ADPGRVAAAALRGRSRHAGEEELRELATEAAAGLISEDPAHSRLAARLLTLTIRAEAASQ 98
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
SF+ ++ +G + L+AD + ++AA LD+ + D D + YFG +
Sbjct: 99 GVTSFTSSVA---------TGHREGLVADRTAAFVRRHAARLDALVDPDADDRFGYFGLR 149
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKD------DIDSAIKT----YHMMSQRW 197
TL YLL+ V KV+E PQH L+RV+ G+ ++ D A++ + +MS+
Sbjct: 150 TLHTRYLLRHPVTRKVIETPQHFLLRVASGLAEEADRAGAGADRAVEEVAALHGLMSRLE 209
Query: 198 FTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRA 257
+ +SPTLFN+GT PQ+SSCFL+ +D ++ IY + A +SK AGGIG++ IR+
Sbjct: 210 YLPSSPTLFNSGTRHPQMSSCFLLDSPEDELDSIYSRYHQVARLSKHAGGIGLAYSRIRS 269
Query: 258 TGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKN 317
G+ IRGTNG S GIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N
Sbjct: 270 RGALIRGTNGHSGGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDN 328
Query: 318 HGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYERE 377
G++ R +L A W+PD FM RV+ + QWSLF P++ GL D WGAEF+ Y E E
Sbjct: 329 TGEDARRTHNLNLAHWIPDEFMRRVEADAQWSLFSPSDVPGLTDLWGAEFDAAYRAAEAE 388
Query: 378 GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEY 435
G A + + A+ L+ ++ + TGT +M FKDT NR +NQ + I SSNLCTEI+E
Sbjct: 389 GLAVRTLPARELYGRMMRTLASTGTGWMTFKDTANRTANQTAEPGNVIHSSNLCTEILEV 448
Query: 436 TSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
T ETAVCNL SI L FVRE + + + D+E+L
Sbjct: 449 TEDGETAVCNLGSINLGAFVREGNTADAGTADAG-----AADGGIDWERLDATVRTAVTF 503
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+++ID+N+YP E A RSN R RP+G+GV GL D L + F+SPEA+ L+ I E +
Sbjct: 504 LDRVIDLNFYPTEEAGRSNARWRPVGLGVMGLQDVLFRLRLPFDSPEARALSARIAERLM 563
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNS 615
A +TS+E+AA+ GP + + ++G+L PD ++V S W LR I+ G+RN+
Sbjct: 564 LTAYETSAELAARNGPLPAWERTRTARGVLHPDHYDVELSWPERWAALRRRIAVTGMRNA 623
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIK 675
LL+A PTA+ + I G +EC EP SN++ R LSGEF+ VN +L+ DL +G W +
Sbjct: 624 LLLAIAPTATIASIAGVHECVEPQVSNLFKRETLSGEFLQVNPYLVADLKRLGRWDADTR 683
Query: 676 NKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPN 735
+ +GSV+ + +PEE++ +Y+T WE+ Q L+DMA R ++DQ+QSLN+ ++ P
Sbjct: 684 EALREANGSVEGLTWLPEEVRRLYRTAWELPQRALIDMAAARTPFLDQAQSLNLFLETPT 743
Query: 736 FKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQ 795
K++S++ W GLKT YYLRSR A + E P V D E
Sbjct: 744 IGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAARAQRPAAEAPAP--TVPDPEA---- 796
Query: 796 VVCSLTNREECMAC 809
V CSL N E C AC
Sbjct: 797 VACSLENPEYCEAC 810
>gi|443624322|ref|ZP_21108796.1| putative Ribonucleoside-diphosphate reductase [Streptomyces
viridochromogenes Tue57]
gi|443342236|gb|ELS56404.1| putative Ribonucleoside-diphosphate reductase [Streptomyces
viridochromogenes Tue57]
Length = 776
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/788 (39%), Positives = 445/788 (56%), Gaps = 48/788 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR+ ++
Sbjct: 24 ADPGRVAAAALRGRSARADETELRELATEAAAGLISEDPAYSRLAARLLTISIAAEAASQ 83
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
SF+E++ G + LIAD E + +AA LD+ I D + YFG +
Sbjct: 84 GVTSFTESVA---------VGHREGLIADRTAEFVRVHAARLDALIDTGADDRFGYFGLR 134
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ + KV+E PQH ++RV+ G+ +DD +D Y +MS+ + +SP
Sbjct: 135 TLHSRYLLRHPLTRKVIETPQHFMLRVAAGLAEDDTARSVDEVAALYGLMSRLDYLPSSP 194
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IR
Sbjct: 195 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 254
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 255 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 313
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A WVPD FM RV +GQWSLF P + L D WG EF+ Y E G A+K
Sbjct: 314 RTHNLNLAHWVPDEFMRRVNADGQWSLFSPADVPELVDLWGEEFDAAYRKAEEAGLARKT 373
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTET 441
+ A++L+ ++ + +TG +M FKD NR +NQ L + SSNLCTEI+E T ET
Sbjct: 374 IPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTALPGHVVHSSNLCTEILEVTDDGET 433
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FV P+R + D+E+L L++++D
Sbjct: 434 AVCNLGSVNLGAFV---------DPAR---------QDIDWERLDATVRTAVTFLDRVVD 475
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN + RP+G+G GL D F L + F+S EA++L+ I E I A +
Sbjct: 476 INFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKRLSTRIAERIMLAAYEA 535
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A + GP + + ++G+L PD ++V + W LR I+ G+RNSLL+A
Sbjct: 536 SADLAERGGPLPAWEKTRTARGVLHPDHYDVELTWPERWAALRSRIATTGMRNSLLLAIA 595
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W + +
Sbjct: 596 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKALGVWDARTREALRES 655
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
+GSVQ IP +++ +Y+T WEI Q L+DMA R ++DQSQSLN+ M+ P K++S
Sbjct: 656 NGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSS 715
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W +GLKT YYLRSR A + + ++P V CSL
Sbjct: 716 MYAYAWKQGLKT-TYYLRSRPATRIARAAQAQAQATIPVQQP-------APEDAVACSLE 767
Query: 802 NREECMAC 809
N E C AC
Sbjct: 768 NPESCEAC 775
>gi|291303012|ref|YP_003514290.1| ribonucleoside-diphosphate reductase subunit alpha [Stackebrandtia
nassauensis DSM 44728]
gi|290572232|gb|ADD45197.1| ribonucleoside-diphosphate reductase, alpha subunit [Stackebrandtia
nassauensis DSM 44728]
Length = 771
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 321/804 (39%), Positives = 467/804 (58%), Gaps = 55/804 (6%)
Query: 15 FDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDY 74
D + +++L+ GL+ + V S V AG + G T ++L A E AA++ P Y
Sbjct: 13 IDHVVQVVRRLASGLADVEAETV--SGPVVAGNWPGATEAELRLRAVEVAASLVATEPGY 70
Query: 75 ASLAARIAVSNLHKNTKKS----FSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAAC 130
+ LAAR+ ++ + S FSE + +G +A LI+D ++E + NA
Sbjct: 71 SRLAARLLSEHIGDEVRLSDVGCFSEAMS---------AGYRAGLISDGLWEFVSSNAPK 121
Query: 131 LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRVSIGIHKDDIDSAIK 188
LD+ + D ++YFG +T+ YLL+ V+E PQH MRV+ G+ + + +
Sbjct: 122 LDALVDDGADDRFEYFGIRTVYDRYLLRHPETRLVLETPQHFFMRVACGL-SETVSDVTE 180
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGI 248
Y ++S + +SPTLFNAGT R QLSSCFL+ D +E IY+ + A +SK AGGI
Sbjct: 181 LYGLLSTLSYLPSSPTLFNAGTRRSQLSSCFLLDSPRDELESIYDRYSQAARLSKYAGGI 240
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G++ IR+ GS IRGTNG SNGIVP LR + + V+QGG +RKGA VYL WHADI
Sbjct: 241 GMAWSRIRSRGSLIRGTNGHSNGIVPWLRTLDSSVAAVNQGG-RRKGAACVYLATWHADI 299
Query: 309 FEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFE 368
EFL L+ N G E+ R +L A W+PD FM RV+++G WSLF P + L D WG EFE
Sbjct: 300 EEFLELRDNTGSEDRRTHNLNLANWIPDEFMRRVESDGDWSLFDPKDVPELVDLWGEEFE 359
Query: 369 KLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL--GTIKSS 426
K Y E GKA +VV A++L+ ++ + +TG +M F D NR NQ + + S
Sbjct: 360 KAYRDAEAAGKAARVVSARDLYGRMMRTLAQTGNGWMTFADISNRTCNQTAVPGNVVHLS 419
Query: 427 NLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLA 486
NLCTEI+E TS ETAVCNL S+ L + FDFE+LA
Sbjct: 420 NLCTEILEVTSDAETAVCNLGSVNLAAHCVDGG--------------------FDFERLA 459
Query: 487 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQL 546
L++ ID+ YYP A ++N R RPIG+G+ G+AD F L M F+S EA++L
Sbjct: 460 RSVRTAVTFLDRSIDLTYYPTAEAEKANRRWRPIGLGLMGMADVFFKLRMPFDSAEAREL 519
Query: 547 NKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRD 605
+ I ETI A +TS+++AA+ G + +Y ++ ++G+L D + + +D W +R+
Sbjct: 520 SNRISETIALAAYETSADLAARLGAHPSYDDTRAARGVLHVDHFADAAVTDPDAWQRVRE 579
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
+++ NG+RNSL++A PTA+ + I G +EC EP SN++ R LSGEF+ VNK+L+ DL
Sbjct: 580 LVAANGLRNSLMIAIAPTATIAAIAGCSECTEPVVSNVFKRETLSGEFIQVNKYLIADLK 639
Query: 666 EMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQ 725
+ G+W+ ++ ++ +GS+ I IP+EL+ +Y+T WE+ Q L+D+A R +IDQSQ
Sbjct: 640 QRGLWNEKLREAVVRAEGSIADIAAIPQELRQLYRTAWELPQRALIDLAAGRTPFIDQSQ 699
Query: 726 SLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPEL 785
SLN+ M P K++S++ W GLKT YYLRSR A + TV ++ PE
Sbjct: 700 SLNLFMAAPTIGKLSSMYAYAWRSGLKT-TYYLRSRPATRINQTTVASA-----PE---- 749
Query: 786 VVDDETKMAQVVCSLTNREECMAC 809
VD E + + CSL N E C AC
Sbjct: 750 -VDAEAE--AIACSLENPETCEAC 770
>gi|386383362|ref|ZP_10068864.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
tsukubaensis NRRL18488]
gi|385669177|gb|EIF92418.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
tsukubaensis NRRL18488]
Length = 801
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 308/787 (39%), Positives = 445/787 (56%), Gaps = 49/787 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK-- 92
DP V+ G + G ++L +LA + AA + ++ P Y+ LAAR+ +
Sbjct: 51 DPGRVAAAALRGRHPGSDAAELHQLATDAAAGLISDDPAYSRLAARLLTRTIAAEAAGQG 110
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
SF+ ++ R G LIAD + + A LD+ I D + YFG +T
Sbjct: 111 SVSFTASV---------RVGHDEGLIADRTAAFVERYAERLDATIDPAADDRFGYFGLRT 161
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + +V+E PQH ++RV+ G+ +DD +D + Y +MS+ + +SPT
Sbjct: 162 LYSRYLLRHPITRQVIETPQHFMLRVACGLAEDDGVRALDEVVALYGLMSRLDYLPSSPT 221
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS IRG
Sbjct: 222 LFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGSLIRG 281
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G++ R
Sbjct: 282 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARR 340
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A WVPD FM RV + +WSLF P + L D WG EF+ Y E +G A+K +
Sbjct: 341 THNLNLAHWVPDEFMRRVADDAEWSLFSPADTPELVDLWGDEFDAAYRAAEAKGLARKTM 400
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ + T+ SSNLCTEI+E T ETA
Sbjct: 401 PARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEKGHTVHSSNLCTEILEVTDDGETA 460
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L FV VG D+E+L L++++D+
Sbjct: 461 VCNLGSVNLGAFV--------------VGGE------IDWERLDATVRTAVTFLDRVVDI 500
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP E A RSN R RP+G+G GL D F L + F+SPEA+ L+ I E I A + S
Sbjct: 501 NFYPTEQAGRSNTRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTRIAERIMLAAYEAS 560
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
+++A + G + + + ++G+L PD + P+ W LR I++ G+RNSLL+A P
Sbjct: 561 ADLAERHGTFPAWEKTRAARGVLHPDHYGTEPAWPERWEALRARIARTGMRNSLLLAIAP 620
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W + + +
Sbjct: 621 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVAELKKLGVWDAQTREALRDAN 680
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ +P +++ +Y+T WEI Q L+DMA R Y+DQSQSLN+ ++ P K++S+
Sbjct: 681 GSVQGFSWVPADVRELYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIGKLSSM 740
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W +GLKT YYLRSR A + ++ P V T V CSL N
Sbjct: 741 YAYAWKQGLKT-TYYLRSRPATRIARAASGSAA------TPVPVPAQATPEEAVACSLEN 793
Query: 803 REECMAC 809
E C AC
Sbjct: 794 PESCEAC 800
>gi|440698861|ref|ZP_20881183.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
turgidiscabies Car8]
gi|440278673|gb|ELP66667.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
turgidiscabies Car8]
Length = 788
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/788 (38%), Positives = 446/788 (56%), Gaps = 52/788 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G S+L ELA E AA + + P Y+ LAAR+ +
Sbjct: 40 ADPGRVAAAALRGRSARADVSELRELATEAAAGLISEDPAYSRLAARLLTVTVAAEAASQ 99
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
+FSE++ G + LIAD E + + LD+ I D D + YFG +
Sbjct: 100 GVTTFSESVA---------VGHREGLIADRTAEFVRLHTDRLDALIDVDGDDRFGYFGLR 150
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ + +V+E PQH ++RV+ G+ +DD +D Y +MS+ + +SP
Sbjct: 151 TLHSRYLLRHPITRRVIETPQHFMLRVASGLAEDDTVRALDEVAALYRLMSRLDYLPSSP 210
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IR
Sbjct: 211 TLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 270
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 271 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 329
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A W+PD FM RV ++ WSLF P++ L D WGAEF+ Y E G A+K
Sbjct: 330 RTHNLNLAHWIPDEFMRRVDSDALWSLFSPSDVPELVDLWGAEFDAAYRAAEEAGLARKT 389
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTET 441
+ A++L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T ET
Sbjct: 390 IPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGSVVHSSNLCTEILEVTDDGET 449
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FV + D+E+L E L++++D
Sbjct: 450 AVCNLGSVNLGAFV------------------DTAAGDIDWERLDETVRTAVTFLDRVVD 491
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN R RP+G+G GL D F L + F+SPEA+ L+ I E + A +
Sbjct: 492 INFYPTEQAGRSNSRWRPVGLGAMGLQDVFFQLRVPFDSPEARALSTRIAERVMLAAYEA 551
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A + GP + + ++G+L PD ++V + W LR+ I++ G+RNSLL+A
Sbjct: 552 SADLAERNGPLPAWEKTRTARGVLHPDHYDVELNWPERWSALRERIAEVGMRNSLLLAVA 611
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W + +
Sbjct: 612 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVRELKDLGVWDARTREALRES 671
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
+GSVQ IP +++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P K++S
Sbjct: 672 NGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSS 731
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W GLKT YYLRSR A I +V ++ P+ V CSL
Sbjct: 732 MYAYAWKSGLKT-TYYLRSRPATR-IARAAQATVPVQQAADPD----------AVACSLE 779
Query: 802 NREECMAC 809
N E C AC
Sbjct: 780 NPESCEAC 787
>gi|395771543|ref|ZP_10452058.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
acidiscabies 84-104]
Length = 788
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 308/788 (39%), Positives = 443/788 (56%), Gaps = 52/788 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR+ ++
Sbjct: 40 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTISIRAEAASQ 99
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
+F+E++ G + LIAD E +A L+ + D + YFG +
Sbjct: 100 SVTTFTESVS---------VGHREGLIADRTAEFARLHATALNGLLDPAADDRFGYFGLR 150
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ + KV+E PQH L+RV+ G+ +DD +D Y +MS+ + +SP
Sbjct: 151 TLHSRYLLRHPITRKVIETPQHFLLRVASGLAEDDTVRALDEVAALYRLMSRLDYLPSSP 210
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IR
Sbjct: 211 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 270
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 271 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 329
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A W+PD FM RV + +WSLF P++ L D WG EF+ Y E +G AKK
Sbjct: 330 RTHNLNLAHWIPDEFMRRVNADAEWSLFSPSDVPELVDLWGDEFDAAYRAAEAKGLAKKT 389
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTET 441
+ A++L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T ET
Sbjct: 390 IPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 449
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FV ++ D+E+L E L++++D
Sbjct: 450 AVCNLGSVNLGAFV------------------DPASQDIDWERLDETVRTAVTFLDRVVD 491
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN R RP+G+G GL D F L + F+SPEA++L+ I E I A +
Sbjct: 492 INFYPTEQAGRSNSRWRPVGLGAMGLQDVFFKLRIPFDSPEAKELSTRIAERIMLAAYEA 551
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+ +A + GP + + ++G+L PD + V + W LR+ I+ G+RNSLL+A
Sbjct: 552 SATLAERSGPLPAWEKTRTARGVLHPDHFGVEFTWPERWAALRERIASTGLRNSLLLAIA 611
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W + +
Sbjct: 612 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVQDLKDLGVWDARTREALREA 671
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
+GSVQ IP +++ +Y+T WEI Q L+DMA R Y+DQ+QSLN+ ++ P K++S
Sbjct: 672 NGSVQDFGWIPADVRALYRTAWEIPQRGLIDMAAARTPYLDQAQSLNLFLETPTIGKLSS 731
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W GLKT YYLRSR A I SV + P+ V CSL
Sbjct: 732 MYAYAWKSGLKT-TYYLRSRPATR-IARAAQASVPVQATPDPD----------AVACSLE 779
Query: 802 NREECMAC 809
N E C AC
Sbjct: 780 NPESCEAC 787
>gi|295836583|ref|ZP_06823516.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB74]
gi|197697283|gb|EDY44216.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB74]
Length = 790
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 311/787 (39%), Positives = 445/787 (56%), Gaps = 47/787 (5%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIA----VSNLHKNT 90
DP V+ G ++L ELA E AA + + P Y+ LAAR+ V+
Sbjct: 38 DPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRLAARLLAIGIVAEAAGQG 97
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
F+ ++ G + LI D E + +AA LD+ I + D + YFG +T
Sbjct: 98 ASGFAASVA---------VGHREGLIGDRTAEFVATHAARLDALIDPEGDDRFGYFGLRT 148
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + +V+E PQH L+RV+ G+ DD +D Y +MS+ + +SPT
Sbjct: 149 LYSRYLLRHPITRQVIETPQHFLLRVAAGLAADDSLPAVDEVASLYRLMSRLDYLPSSPT 208
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IYE + A +SK AGGIG++ IR+ GS IRG
Sbjct: 209 LFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGGIGIAYSRIRSRGSLIRG 268
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G+++ R
Sbjct: 269 TNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDQRR 327
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
L A W+PD FM RV +G+WSLF P + L D WG EFE Y E +G A+K +
Sbjct: 328 THHLNLAHWIPDEFMRRVAADGEWSLFSPADVPELTDLWGEEFEAAYRAAEAKGLARKTM 387
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEIIE T ETA
Sbjct: 388 PARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHSSNLCTEIIEVTDDGETA 447
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL SI L FV ++ D+E+L E L++++D+
Sbjct: 448 VCNLGSINLGAFVENGEI--------------------DWERLDETVRTAVTFLDRVVDI 487
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP A SN R RP+G+G GL D F L + F+S A+ ++ I E I A + S
Sbjct: 488 NFYPTGQAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAAAKAVSTRIAERIMLAAYEAS 547
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
+++A K GP + + ++G+L PD ++V + W LR I+K G+RNSLL+A P
Sbjct: 548 ADLAEKHGPVPAWEKTRTARGVLHPDHFDVERTWPERWEALRARIAKTGMRNSLLLAIAP 607
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W + + +
Sbjct: 608 TATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLKKLGVWDARTREALREAN 667
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ IPE+++ +Y+T WE+ Q L+DMA +R ++DQSQSLN+ M+ P K++S+
Sbjct: 668 GSVQGFNWIPEDVRALYRTAWELPQRGLIDMAAERTAFLDQSQSLNLFMETPTIGKLSSM 727
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W++GLKT YYLRSR A I +S P + V D +A CSL N
Sbjct: 728 YAHAWNKGLKT-TYYLRSRPATR-IARAAGSSAAASAPIPVQQAVPDADAIA---CSLEN 782
Query: 803 REECMAC 809
E C AC
Sbjct: 783 PESCEAC 789
>gi|302554046|ref|ZP_07306388.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471664|gb|EFL34757.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 793
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 311/787 (39%), Positives = 445/787 (56%), Gaps = 52/787 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK-- 92
DP V+ G ++L +LA E AA + + P Y+ LAAR+ +
Sbjct: 46 DPGRVAAAALRGRSARADEAELRDLATEAAAGLISEDPAYSRLAARLLTIGIRAEAASQG 105
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
SF+E++ + H R GL IAD E + +AA LD+ I D + YFG +T
Sbjct: 106 VTSFTESV--VVGH---REGL----IADRTAEFVRLHAARLDALIDPAADDRFGYFGLRT 156
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKD----DIDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KVVE PQH ++RV+ G+ +D +D Y +MS+ + +SPT
Sbjct: 157 LHSRYLLRHPLTRKVVETPQHFMLRVAAGLAEDHTARSVDEVAALYELMSRLDYLPSSPT 216
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG++ IRA GS IRG
Sbjct: 217 LFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 276
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+D+ EFL L+ N G++ R
Sbjct: 277 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDVEEFLELRDNTGEDARR 335
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A WVPD FM RV + QWSLF P++ L D WG EF+ Y E +G AK+ +
Sbjct: 336 THNLNLAHWVPDEFMRRVNADAQWSLFSPSDVPELVDLWGEEFDTAYRAAEAKGLAKRTL 395
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E TS ETA
Sbjct: 396 PARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTSDGETA 455
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L FV + D+++L L++++D+
Sbjct: 456 VCNLGSVNLGAFV------------------DTSTGDLDWDRLDATVRTAVTFLDRVVDI 497
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP E A RSN R RP+G+G GL D F L + F+SPEA+ L+ I E I A + S
Sbjct: 498 NFYPTEQAGRSNSRWRPVGLGAMGLQDVFFKLRLPFDSPEAKALSTRIAERIMLAAYEAS 557
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
+++A + GP + + ++G+L PD ++V + W LR+ I+ G+RNSLL+A P
Sbjct: 558 ADLAERSGPLPAWEKTRTARGVLHPDHYDVELTWPERWAALRERIAATGMRNSLLLAIAP 617
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W + +
Sbjct: 618 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKRLGVWDARSREALREAS 677
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ IPE+++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P K++S+
Sbjct: 678 GSVQDFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSSM 737
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W GLKT YYLRSR A + T + P+ PE V CSL N
Sbjct: 738 YAYAWKSGLKT-TYYLRSRPATRIARAAQATVPAQATPD-PE----------AVACSLEN 785
Query: 803 REECMAC 809
E C AC
Sbjct: 786 PESCEAC 792
>gi|359149119|ref|ZP_09182183.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. S4]
Length = 791
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 305/787 (38%), Positives = 437/787 (55%), Gaps = 48/787 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR+ + +
Sbjct: 40 DPGRVAAAALRGRNAASDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 99
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
+F+E++ +G + LIAD + +A LD+ + D + YFG +T
Sbjct: 100 VTTFTESVA---------TGHREGLIADRTAAFVTAHAERLDALVDPAADDRFGYFGLRT 150
Query: 151 LERSYLLKV--QGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
+ YLL+ +V+E PQH ++RV+ G+ +DD +D Y +MS + +SPT
Sbjct: 151 VHSRYLLRHPHTRQVIETPQHFMLRVACGLAEDDSVRALDEVASLYRLMSALSYLPSSPT 210
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D +E IY+ + A +SK AGGIG++ IRA GS IRG
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPKDELESIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 270
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L + + V+QGG +RKGA AVYLE WHADI EFL L+ N G+E R
Sbjct: 271 TNGHSNGIVPFLNTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEEARR 329
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A W+PD FM RV + WSLF P++ L D WG F+ Y E +G A++ +
Sbjct: 330 THNLNLAHWIPDEFMRRVDADADWSLFSPSDVPELTDLWGDAFDAAYRAAEAQGLARRTI 389
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ L T+ SSNLCTEI+E T ETA
Sbjct: 390 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L FV D+E+L E L++++D+
Sbjct: 450 VCNLGSVNLGAFV--------------------DGGAIDWERLDEAVRTAVVFLDRVVDI 489
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP E A RSN R RP+G+G GL D F L + F+SPEAQ+L+ I E I A +TS
Sbjct: 490 NFYPTEQAERSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEAQRLSTRIAERIMLTAYETS 549
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
++A K GP + + ++G+L PD ++ + W LR ++++G+RN+LL+A P
Sbjct: 550 CDLAEKNGPLPNWDRTRTAQGVLHPDHYDTDLAWPERWEALRARVAESGMRNALLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAS 669
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ IPEEL+ +Y+T WE+ Q L+DMA R ++DQSQSLN+ M+ P K++S+
Sbjct: 670 GSVQGFAWIPEELRALYRTAWELPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSSM 729
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W +GLKT YYLRSR A + + P + + CSL N
Sbjct: 730 YAYAWKKGLKT-TYYLRSRPAT-----RIARAAGGSAPATATVPAQAAPDAEAIACSLEN 783
Query: 803 REECMAC 809
E C AC
Sbjct: 784 PESCEAC 790
>gi|294631327|ref|ZP_06709887.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. e14]
gi|292834660|gb|EFF93009.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. e14]
Length = 798
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/788 (38%), Positives = 444/788 (56%), Gaps = 48/788 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKS 93
DP V+ G ++L ELA E +A + + P Y+ LAAR+ +
Sbjct: 46 ADPGRVAAAALRGRSARADEAELRELATEASAGLISEDPAYSRLAARLLTLTIRAEAASQ 105
Query: 94 ----FSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
F+E++ G + LIAD E + +A LD+ + D + YFG +
Sbjct: 106 GVTRFTESVA---------VGHREGLIADRTAEFVRLHAERLDAAVDPAADDRFGYFGLR 156
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDDIDSAI----KTYHMMSQRWFTHASP 203
TL YLL+ + KV+E PQH ++RV+ G+ +D D A+ Y +MS+ + +SP
Sbjct: 157 TLHSRYLLRHPITRKVIETPQHFMLRVASGLAQDATDHAVDEVTALYGLMSRLDYLPSSP 216
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG++ IR+ GS IR
Sbjct: 217 TLFNSGTRHPQMSSCYLLDSPQDELDSIYDRYHQVARLSKHAGGIGIAYSRIRSRGSLIR 276
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 277 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 335
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A WVPD FM RV +GQWSLF P++ L D WGAEF+ Y E G A+K
Sbjct: 336 RTHNLNLAHWVPDEFMRRVNADGQWSLFSPSDVPELVDLWGAEFDAAYRAAEERGLARKT 395
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTET 441
+ A+ L+ ++ + +TG +M FKD NR +NQ + I SSNLCTEI+E T ET
Sbjct: 396 MPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVIHSSNLCTEILEVTDDGET 455
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FVR+ D+ D+E+L E L++++D
Sbjct: 456 AVCNLGSVNLGAFVRDGDI--------------------DWERLDETVRTAVTFLDRVVD 495
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN R RP+G+G GL D F L + F+S A+ L+ I E I A +
Sbjct: 496 INFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSAGARALSTRIAERIMLAAYEA 555
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A + GP + + ++G+L PD ++V + W LR+ I+ G+RNSLL+A
Sbjct: 556 SADLAERHGPLPAWEKTRAARGVLHPDHYDVSLTWPERWTALRERIAAVGMRNSLLLAIA 615
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL +G+W + +
Sbjct: 616 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVNDLKALGVWDARTREALRDS 675
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
+GSVQ IP +++ +Y+T WEI Q L+DMA R ++DQ+QSLN+ ++ P K++S
Sbjct: 676 NGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSS 735
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W +GLKT YYLRSR A + + P + L V CSL
Sbjct: 736 MYAYAWKQGLKT-TYYLRSRPAT-----RIARAAQGRTPAEAALPAQQTADPDAVACSLE 789
Query: 802 NREECMAC 809
N E C AC
Sbjct: 790 NPESCEAC 797
>gi|289769188|ref|ZP_06528566.1| ribonucleotide-diphosphate reductase large subunit [Streptomyces
lividans TK24]
gi|289699387|gb|EFD66816.1| ribonucleotide-diphosphate reductase large subunit [Streptomyces
lividans TK24]
Length = 794
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 317/805 (39%), Positives = 445/805 (55%), Gaps = 46/805 (5%)
Query: 16 DKITARLKKLSYGLSTE--HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPD 73
D A L + GL+ + DP V+ G ++L ELA E AA + + P
Sbjct: 24 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPV 83
Query: 74 YASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDS 133
Y+ LAAR+ + T D +G + LIAD + +A LD+
Sbjct: 84 YSRLAARLLTIGIRAEAASQGVVTFTDSVA-----TGHREGLIADRTAAFVRLHADRLDA 138
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDDI----DSAI 187
I D D + YFG +TL YLL+ + K VE PQH L+RV+ G+ +DD D
Sbjct: 139 LIDQDADDRFGYFGLRTLYSRYLLRHPITRKAVETPQHFLLRVAAGLAEDDTLRAADEVA 198
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ +Y+ L + A +SK AGG
Sbjct: 199 ALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSKHAGG 258
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++ +RA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 259 IGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 317
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
+ EFL L+ N G++ R +L A W+PD FM RV +G WSLF P + L D WG EF
Sbjct: 318 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDADGTWSLFSPADVPELTDLWGEEF 377
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKS 425
+ Y E G A++ + A+ L+ ++ + +TG +M FKDT NR +NQ + S
Sbjct: 378 DAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGHVVHS 437
Query: 426 SNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKL 485
SNLCTEI+E T ETAVCNL S+ L FV P D+E+L
Sbjct: 438 SNLCTEILEVTDDGETAVCNLGSVNLGAFVD----PAHGD--------------MDWERL 479
Query: 486 AEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L + F+SPEA+
Sbjct: 480 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 539
Query: 546 LNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRD 605
L+ I E I A +TS+++A + GP + + +KG+L PD + V P+ W LR
Sbjct: 540 LSTRIAERIMLAAYETSADLAERNGPLPAWEKTRTAKGVLHPDHYGVEPAWPERWAALRA 599
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 600 RMATTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLK 659
Query: 666 EMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQ 725
+G+W + + +GSVQ IPE+++ +Y+T WEI Q L+DMA R Y+DQ+Q
Sbjct: 660 RLGVWDARTREALREANGSVQGFTWIPEDVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 719
Query: 726 SLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSR-AAADAIKFTVDTSVFKEKPEKPE 784
SLN+ ++ P K++S++ W +GLKT YYLRSR A A T+V + PE
Sbjct: 720 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAARATTVPVQAAPDPE 778
Query: 785 LVVDDETKMAQVVCSLTNREECMAC 809
V CSL N E C AC
Sbjct: 779 ----------AVACSLENPESCEAC 793
>gi|21223594|ref|NP_629373.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicolor A3(2)]
gi|8546892|emb|CAB94611.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicolor A3(2)]
Length = 791
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/805 (39%), Positives = 445/805 (55%), Gaps = 46/805 (5%)
Query: 16 DKITARLKKLSYGLSTE--HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPD 73
D A L + GL+ + DP V+ G ++L ELA E AA + + P
Sbjct: 21 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPV 80
Query: 74 YASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDS 133
Y+ LAAR+ + T D +G + LIAD + +A LD+
Sbjct: 81 YSRLAARLLTIGIRAEAASQGVVTFTDSVA-----TGHREGLIADRTAAFVRLHADRLDA 135
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDDI----DSAI 187
I D D + YFG +TL YLL+ + K VE PQH L+RV+ G+ +DD D
Sbjct: 136 LIDQDADDRFGYFGLRTLYSRYLLRHPITRKAVETPQHFLLRVAAGLAEDDTVRAADEVA 195
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ +Y+ L + A +SK AGG
Sbjct: 196 ALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSKHAGG 255
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++ +RA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 256 IGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 314
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
+ EFL L+ N G++ R +L A W+PD FM RV +G WSLF P + L D WG EF
Sbjct: 315 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDADGTWSLFSPADVPELTDLWGEEF 374
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKS 425
+ Y E G A++ + A+ L+ ++ + +TG +M FKDT NR +NQ + S
Sbjct: 375 DAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGHVVHS 434
Query: 426 SNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKL 485
SNLCTEI+E T ETAVCNL S+ L FV P D+E+L
Sbjct: 435 SNLCTEILEVTDDGETAVCNLGSVNLGAFVD----PAHGD--------------MDWERL 476
Query: 486 AEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L + F+SPEA+
Sbjct: 477 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 536
Query: 546 LNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRD 605
L+ I E I A +TS+++A + GP + + ++G+L PD + V P+ W LR
Sbjct: 537 LSTRIAERIMLAAYETSADLAERNGPLPAWEKTRTARGVLHPDHYGVEPAWPERWAALRA 596
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 597 RMATTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLK 656
Query: 666 EMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQ 725
+G+W + + +GSVQ IPE+++ +Y+T WEI Q L+DMA R Y+DQ+Q
Sbjct: 657 RLGVWDARTREALREANGSVQGFTWIPEDVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 716
Query: 726 SLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSR-AAADAIKFTVDTSVFKEKPEKPE 784
SLN+ ++ P K++S++ W +GLKT YYLRSR A A T+V + PE
Sbjct: 717 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAARATTVPVQAAPDPE 775
Query: 785 LVVDDETKMAQVVCSLTNREECMAC 809
V CSL N E C AC
Sbjct: 776 ----------AVACSLENPESCEAC 790
>gi|302542645|ref|ZP_07294987.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
hygroscopicus ATCC 53653]
gi|302460263|gb|EFL23356.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
himastatinicus ATCC 53653]
Length = 804
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 323/817 (39%), Positives = 457/817 (55%), Gaps = 63/817 (7%)
Query: 19 TARLKKLSYGLSTE--HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
TA L+ L+ GL+ + DP V+ G + G ++L LA E AA + P+Y+
Sbjct: 24 TALLRTLT-GLTADLPATDPGKVAAAALRGRHPGSDEAELRSLATEAAAGLIGEEPEYSK 82
Query: 77 LAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLD 132
LAAR+ + SFS ++ G + LIAD E + + A LD
Sbjct: 83 LAARLLTRAIADEAAGQGADSFSASVA---------VGHREGLIADSTAEFVTAHTARLD 133
Query: 133 SEIIYDR------DFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKD--- 181
+ + DR D + YFG +TL YLL+ + +V+E PQH L+RV+ G+ +D
Sbjct: 134 A--LVDRALADGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFLLRVACGLAEDLSE 191
Query: 182 -DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
+D + Y M S + +SPTLFN+GT PQ+SSC+L+ D ++ IY + A
Sbjct: 192 RALDDVAELYRMTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYNRYHQVAR 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SK AGGIG+S IRA GS IRGTNG SNGIVP LR + + V+QGG +RKGA VY
Sbjct: 252 LSKHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVY 310
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LE WHADI EFL L+ N G+E R +L A W+PD FM RV+ +G WSLF P +A L
Sbjct: 311 LETWHADIEEFLELRDNTGEEARRTHNLNVAHWIPDEFMRRVEADGDWSLFSPVDAPELV 370
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL 420
D WG EF+ Y E EG+A K V A+ L+ ++ + +TG +M FKD NR +NQ
Sbjct: 371 DLWGEEFDAAYRKAEAEGRALKQVPARQLYSRMMRTLAQTGNGWMTFKDAANRTANQTAE 430
Query: 421 G--TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
+ SSNLCTEI+E T ETAVCNL S+ L S +G G
Sbjct: 431 AGRVVHSSNLCTEILEVTDDGETAVCNLGSVNL---------------SAHLGEDGE--- 472
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
D+E+L L++++D+N+YP E A SN R RP+G+G+ GL D F L + F
Sbjct: 473 -MDWERLDRTVRTAVTFLDRVVDINFYPTEEAGASNSRWRPVGLGLMGLQDVFFRLRLPF 531
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS--- 595
+SPEAQ L+ I E I A + S ++A + GP+ + + ++G+L PD + +
Sbjct: 532 DSPEAQALSTRISERIMLAAYEASCDLAERHGPHPAWAETRTARGVLHPDHYTGAQAAWP 591
Query: 596 DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
+RW+ LR ++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+
Sbjct: 592 ERWE--ALRTRMATTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQ 649
Query: 656 VNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAV 715
VN +L++DL ++G+W ++ + +GSVQ + +P++++ +Y+T WEI Q L+DMA
Sbjct: 650 VNNYLVNDLKKLGVWDTQTRDALREANGSVQDLSWVPQDVRDLYRTAWEIPQRALIDMAA 709
Query: 716 DRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAA---ADAIKFTVD 772
R Y+DQSQSLN+ M P K++S++ W RG+KT YYLRSR A A + +
Sbjct: 710 ARTPYLDQSQSLNLFMAAPTIGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARGGAA 768
Query: 773 TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
T+ P DE V CSL N E C AC
Sbjct: 769 TATTPVPAPVPAQQTPDEADA--VACSLENPESCEAC 803
>gi|29829568|ref|NP_824202.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
avermitilis MA-4680]
gi|29606676|dbj|BAC70737.1| putative ribonucleoside-diphosphate reductase alpha chain
[Streptomyces avermitilis MA-4680]
Length = 793
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 308/788 (39%), Positives = 448/788 (56%), Gaps = 48/788 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR+ ++ +
Sbjct: 41 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTISIAEEAASQ 100
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
SFS +I G + L+AD + + + A LD+ I D + YFG +
Sbjct: 101 GVTSFSASIT---------VGHREGLVADRTADFVRLHTARLDALIDTGADDRFGYFGLR 151
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ + +V+E PQH ++RV+ G+ +DD +D Y +MS+ + +SP
Sbjct: 152 TLHSRYLLRHPITRRVIETPQHFMLRVASGLAEDDTSHAVDEVAALYGLMSRLDYLPSSP 211
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IR
Sbjct: 212 TLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 271
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 272 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 330
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A W+PD FM RV NG WSLF P + L D WG EF+ Y E G AKK
Sbjct: 331 RTHNLNLAHWIPDEFMRRVNENGVWSLFSPADVPELVDLWGDEFDAAYRKAEEAGLAKKT 390
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTET 441
+ A++L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T ET
Sbjct: 391 IPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 450
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FV +D+ D+E+L L++++D
Sbjct: 451 AVCNLGSVNLGAFVVGRDI--------------------DWERLDATVRTAVTFLDRVVD 490
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN R RP+G+G GL D F L + F+SPEAQ L+ I E I A +
Sbjct: 491 INFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSPEAQALSTRIAERIMLAAYEA 550
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A + GP + + ++G+L PD ++V + W LR+ I+ G+RNSLL+A
Sbjct: 551 SADLAERNGPLPAWEKTRTARGVLHPDHFDVELTWPERWAALRERIAAVGMRNSLLLAIA 610
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W + +
Sbjct: 611 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKQLGVWDAQTREALRES 670
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
GSVQ +P++++ +Y+T WEI Q L+DMA R ++DQ+QSLN+ ++ P K++S
Sbjct: 671 GGSVQGFTWVPQDVRDLYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSS 730
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W GLKT YYLRSR A + + +PEK + V ++ V CSL
Sbjct: 731 MYAYAWKSGLKT-TYYLRSRPATR----IARAAQAQAQPEK-TIPVQQVSEPDAVACSLE 784
Query: 802 NREECMAC 809
N E C AC
Sbjct: 785 NPESCEAC 792
>gi|291454053|ref|ZP_06593443.1| ribonucleotide-diphosphate reductase subunit large [Streptomyces
albus J1074]
gi|291357002|gb|EFE83904.1| ribonucleotide-diphosphate reductase subunit large [Streptomyces
albus J1074]
Length = 791
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/787 (38%), Positives = 436/787 (55%), Gaps = 48/787 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR+ + +
Sbjct: 40 DPGRVAAAALRGRNAASDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 99
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
+F+E++ +G + LIAD + +A LD+ + D + YFG +T
Sbjct: 100 VTTFTESVA---------TGHREGLIADRTAAFVTAHAERLDALVDPAADDRFGYFGLRT 150
Query: 151 LERSYLLKV--QGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
+ YLL+ +V+E PQH ++RV+ G+ +DD +D Y +MS + +SPT
Sbjct: 151 VHSRYLLRHPHTRQVIETPQHFMLRVACGLAEDDSARALDEVASLYRLMSALSYLPSSPT 210
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D +E IY+ + A +SK AGGIG++ IRA GS IRG
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPKDELESIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 270
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L + + V+QGG +RKGA AVYLE WHAD+ EFL L+ N G+E R
Sbjct: 271 TNGHSNGIVPFLNTLDASVAAVNQGG-RRKGAAAVYLETWHADVEEFLELRDNTGEEARR 329
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A W+PD FM RV + WSLF P++ L D WG F+ Y E G A++ +
Sbjct: 330 THNLNLAHWIPDEFMRRVDADADWSLFSPSDVPELTDLWGDAFDAAYRAAEARGLARRTI 389
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ L T+ SSNLCTEI+E T ETA
Sbjct: 390 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L FV D+E+L E L++++D+
Sbjct: 450 VCNLGSVNLGAFV--------------------DGGAIDWERLDEAVRTAVVFLDRVVDI 489
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP E A RSN R RP+G+G GL D F L + F+SPEAQ+L+ I E I A +TS
Sbjct: 490 NFYPTEQAERSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEAQRLSTRIAERIMLTAYETS 549
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
++A K GP + + ++G+L PD ++ + W LR ++++G+RN+LL+A P
Sbjct: 550 CDLAEKNGPLPNWDRTRTAQGVLHPDHYDTDLAWPERWEALRARVAESGMRNALLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAS 669
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ IPEEL+ +Y+T WE+ Q L+DMA R ++DQSQSLN+ M+ P K++S+
Sbjct: 670 GSVQGFAWIPEELRALYRTAWELPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSSM 729
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W +GLKT YYLRSR A + + P + + CSL N
Sbjct: 730 YAYAWKKGLKT-TYYLRSRPAT-----RIARAAGGSAPATATVPAQAAPDAEAIACSLEN 783
Query: 803 REECMAC 809
E C AC
Sbjct: 784 PESCEAC 790
>gi|7328344|emb|CAB82485.1| class I ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces coelicolor A3(2)]
Length = 791
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 315/805 (39%), Positives = 445/805 (55%), Gaps = 46/805 (5%)
Query: 16 DKITARLKKLSYGLSTE--HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPD 73
D A L + GL+ + DP V+ G ++L ELA E AA + + P
Sbjct: 21 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPV 80
Query: 74 YASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDS 133
Y+ LAAR+ + T D +G + LIAD + +A LD+
Sbjct: 81 YSRLAARLLTIGIRAEAASQGVVTFTDSVA-----TGHREGLIADRTAAFVRLHADRLDA 135
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDDI----DSAI 187
I D D + YFG +TL YLL+ + K VE PQH L+RV+ G+ +DD D
Sbjct: 136 LIDQDADDRFGYFGLRTLYSRYLLRHPITRKAVETPQHFLLRVAAGLAEDDTVRAADEVA 195
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ +Y+ L + A +SK AGG
Sbjct: 196 ALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSKHAGG 255
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++ +RA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 256 IGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 314
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
+ EFL L+ N G++ R +L A W+PD FM RV +G WSLF P + L D WG EF
Sbjct: 315 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDADGTWSLFSPADVPELTDLWGEEF 374
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKS 425
+ Y E G A++ + A+ L+ ++ + +TG +M FKDT NR +NQ + S
Sbjct: 375 DAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGHVVHS 434
Query: 426 SNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKL 485
SNLCTEI+E T ETAVCNL S+ L FV P D+E+L
Sbjct: 435 SNLCTEILEVTDDGETAVCNLGSVNLGAFVD----PAHGD--------------MDWERL 476
Query: 486 AEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L + F+SPEA+
Sbjct: 477 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 536
Query: 546 LNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRD 605
L+ I E I A +TS+++A + GP + + ++G+L PD + V P+ W LR
Sbjct: 537 LSTRIAERIMLAAYETSADLAERNGPLPAWEKTRTARGVLHPDHYGVEPAWPERWAALRA 596
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
++ G+RNS+L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 597 RMATTGLRNSMLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLK 656
Query: 666 EMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQ 725
+G+W + + +GSVQ IPE+++ +Y+T WEI Q L+DMA R Y+DQ+Q
Sbjct: 657 RLGVWDARTREALREANGSVQGFTWIPEDVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 716
Query: 726 SLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSR-AAADAIKFTVDTSVFKEKPEKPE 784
SLN+ ++ P K++S++ W +GLKT YYLRSR A A T+V + PE
Sbjct: 717 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAARATTVPVQAAPDPE 775
Query: 785 LVVDDETKMAQVVCSLTNREECMAC 809
V CSL N E C AC
Sbjct: 776 ----------AVACSLENPESCEAC 790
>gi|421744324|ref|ZP_16182312.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SM8]
gi|406687276|gb|EKC91309.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SM8]
Length = 791
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/787 (38%), Positives = 436/787 (55%), Gaps = 48/787 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR+ + +
Sbjct: 40 DPGRVAAAALRGRNAASDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 99
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
+F+E++ +G + LIAD + +A LD+ + D + YFG +T
Sbjct: 100 VTTFTESVA---------TGHREGLIADRTAAFVTAHAERLDALVDPAADDRFGYFGLRT 150
Query: 151 LERSYLLKV--QGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
+ YLL+ +V+E PQH ++RV+ G+ +DD +D Y +MS + +SPT
Sbjct: 151 VHSRYLLRHPHTRQVIETPQHFMLRVACGLAEDDSARALDEVASLYRLMSALSYLPSSPT 210
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D +E IY+ + A +SK AGGIG++ IRA GS IRG
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPKDELESIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 270
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L + + V+QGG +RKGA AVYLE WHAD+ EFL L+ N G+E R
Sbjct: 271 TNGHSNGIVPFLNTLDASVAAVNQGG-RRKGAAAVYLETWHADVEEFLELRDNTGEEARR 329
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A W+PD FM RV + WSLF P++ L D WG F+ Y E G A++ +
Sbjct: 330 THNLNLAHWIPDEFMRRVDADADWSLFSPSDVPELTDLWGDAFDAAYRAAEARGLARRTI 389
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ L T+ SSNLCTEI+E T ETA
Sbjct: 390 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L FV D+E+L E L++++D+
Sbjct: 450 VCNLGSVNLGAFV--------------------DGGAIDWERLDEAVRTAVVFLDRVVDI 489
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP E A RSN R RP+G+G GL D F L + F+SPEAQ+L+ I E I A +TS
Sbjct: 490 NFYPTEQAERSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEAQRLSTRIAERIMLTAYETS 549
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
++A K GP + + ++G+L PD ++ + W LR ++++G+RN+LL+A P
Sbjct: 550 CDLAEKNGPLPNWDRTRTAQGVLHPDHYDTDLAWPERWEALRARVAESGMRNALLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAS 669
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ IPEEL+ +Y+T WE+ Q L+DMA R ++DQSQSLN+ M+ P K++S+
Sbjct: 670 GSVQGFAWIPEELRALYRTAWELPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSSM 729
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W +GLKT YYLRSR A + + P + + CSL N
Sbjct: 730 YAYAWKKGLKT-TYYLRSRPAT-----RIARAAGGSAPATATVPAQAAPDAEAIACSLEN 783
Query: 803 REECMAC 809
E C AC
Sbjct: 784 PESCEAC 790
>gi|429196117|ref|ZP_19188103.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
ipomoeae 91-03]
gi|428668195|gb|EKX67232.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
ipomoeae 91-03]
Length = 806
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/775 (39%), Positives = 439/775 (56%), Gaps = 53/775 (6%)
Query: 53 TSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNER 108
T++L ELA E +A + + P Y+ LAAR+ + +F+E+I
Sbjct: 66 TAELRELATEASAGLISEDPAYSKLAARLLAIGIRAEAASQGVTTFTESIA--------- 116
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVER 166
G + L+AD E + +A LD+ + D + YFG +TL YLL+ + KV+E
Sbjct: 117 VGHREGLVADRTAEFVRVHAERLDALVDPAADDRFGYFGLRTLHSRYLLRHPITRKVIET 176
Query: 167 PQHMLMRVSIGIHKD----------DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
PQH ++RV+ G+ +D +D Y +MS+ + +SPTLFN+GT PQ+S
Sbjct: 177 PQHFMLRVASGLAEDTALDARTGTRSVDEVAALYGLMSRLDYLPSSPTLFNSGTRHPQMS 236
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IRGTNG SNGIVP L
Sbjct: 237 SCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIRGTNGHSNGIVPFL 296
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++ R +L A W+PD
Sbjct: 297 KTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHNLNLAHWIPD 355
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTS 396
FM RV + +WSLF P + L D WG EF+ Y E +G AKK + A++L+ ++ +
Sbjct: 356 EFMRRVNADERWSLFSPADVPELVDLWGEEFDAAYRKAEADGLAKKTIPARDLYGRMMRT 415
Query: 397 QIETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTETAVCNLASIALPRF 454
+TG +M FKD NR +NQ + SSNLCTEI+E T ETAVCNL S+ L F
Sbjct: 416 LAQTGNGWMTFKDAANRTANQTAEAGRVVHSSNLCTEILEVTDDGETAVCNLGSVNLGAF 475
Query: 455 VREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSN 514
V + G D+E+L E L++++D+N+YP E A RSN
Sbjct: 476 VDQA-----------TGD-------LDWERLDETVRTAVTFLDRVVDINFYPTEQAGRSN 517
Query: 515 LRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYET 574
R RP+G+G GL D F L + F+SPEA+ L+ I E I A +TS+++A ++GP
Sbjct: 518 ARWRPVGLGAMGLQDVFFKLRLPFDSPEAKALSTRIAERIMLAAYETSTDLAERDGPLPA 577
Query: 575 YHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
+ + ++G+L PD + V + W LR+ I+ G+RNSLL+A PTA+ + I G E
Sbjct: 578 WEKTRTARGVLHPDHYGVEFTWPERWAALRERIATTGMRNSLLLAIAPTATIASIAGVYE 637
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
C EP SN++ R LSGEF+ VN +L+ DL +G+W + + +GSVQ IP +
Sbjct: 638 CIEPQVSNLFKRETLSGEFLQVNSYLVQDLKALGVWDARTREALRDSNGSVQDFAWIPAD 697
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
++ +Y+T WEI Q L+DMA R Y+DQSQSLN+ ++ P K++S++ W GLKT
Sbjct: 698 VRALYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIGKLSSMYAYAWKSGLKT- 756
Query: 755 MYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
YYLRSR A I +S P + DD V CSL N E C AC
Sbjct: 757 TYYLRSRPATR-IARAAGSSSAAATPVPVQATADD-----AVACSLENPESCEAC 805
>gi|374986758|ref|YP_004962253.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
bingchenggensis BCW-1]
gi|297157410|gb|ADI07122.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
bingchenggensis BCW-1]
Length = 799
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/805 (39%), Positives = 450/805 (55%), Gaps = 53/805 (6%)
Query: 22 LKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI 81
L KL+ L DP V+ G + G ++L LA E AA + P+Y+ LAAR+
Sbjct: 30 LTKLTADLPA--TDPGKVAAAALRGRHPGSDAAELRTLATEAAAGLIAEEPEYSKLAARL 87
Query: 82 AVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDS---- 133
+ + SFS ++ G + LIAD E + +AA LD+
Sbjct: 88 LTLAIAEEAAGQGAVSFSSSVA---------VGHREGLIADGTAEFVTSHAARLDALVDK 138
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAI 187
+ D + YFG +TL YLL+ + +V+E PQH L+RV+ G+ +D +D
Sbjct: 139 ALADGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFLLRVACGLAEDHSQRALDDVA 198
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
+ Y + S + +SPTLFN+GT PQ+SSC+L+ D ++ IY + A +SK AGG
Sbjct: 199 ELYRLTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYNRYHQVARLSKHAGG 258
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S IRA GS IRGTNG SNGIVP LR + + V+QGG +RKGA VYLE WHAD
Sbjct: 259 IGLSYSRIRARGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHAD 317
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
I EFL L+ N G+E R +L A W+PD FM RV+ + WSLF P +A L D WG EF
Sbjct: 318 IEEFLELRDNTGEEARRTHNLNIAHWIPDEFMRRVEADADWSLFSPVDAPALVDLWGEEF 377
Query: 368 EKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKS 425
+ YT E EG A K V A+ L+ ++ + +TG +M FKD NR +NQ + + S
Sbjct: 378 DAAYTKAEAEGLAVKTVPARQLYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGRVVHS 437
Query: 426 SNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKL 485
SNLCTEI+E T ETAVCNL S+ L +H +G G D+ +L
Sbjct: 438 SNLCTEILEVTDDGETAVCNLGSVNL-----------AAH----LGEDGQ----MDWARL 478
Query: 486 AEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQ 545
L++++D+N+YP + A SN R RP+G+G+ GL D F L + F+SPEAQQ
Sbjct: 479 DATVRTAVTFLDRVVDINFYPTQEAGASNSRWRPVGLGLMGLQDVFFRLRLPFDSPEAQQ 538
Query: 546 LNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLR 604
L+ I E I A + S +A + GP+ + + ++G+L PD + + + + W LR
Sbjct: 539 LSTQISERIMLAAYEASCALAERHGPHPAWSATRTARGVLHPDHYTDAVATWPERWAALR 598
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
+ ++K+G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL
Sbjct: 599 ERMAKSGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVNDL 658
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
++G+W + + +GSVQ +P+E++ +Y+T WE+ Q L+DMA R Y+DQS
Sbjct: 659 KKLGVWDAQSREALRESNGSVQDFSWVPKEVRELYRTAWEVPQRALIDMAAARTPYLDQS 718
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPE 784
QSLN+ M P K++S++ W RG+KT YYLRSR A + + +
Sbjct: 719 QSLNLFMASPTIGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARAAAPATVPIPTQQ 777
Query: 785 LVVDDETKMAQVVCSLTNREECMAC 809
VD E + CSL N E C AC
Sbjct: 778 APVDPEV----IACSLENPESCEAC 798
>gi|291437352|ref|ZP_06576742.1| class Ia ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces ghanaensis ATCC 14672]
gi|291340247|gb|EFE67203.1| class Ia ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces ghanaensis ATCC 14672]
Length = 793
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/788 (39%), Positives = 440/788 (55%), Gaps = 46/788 (5%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR+ +
Sbjct: 39 ADPGRVAAAALRGRSARADETELRELATEAAAGLISEDPAYSRLAARLLAIGIRAEAASQ 98
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
SF+ ++ +G + LIAD + +A LD+ I D + YFG +
Sbjct: 99 GVTSFTGSVA---------TGHREGLIADRTAAFVRLHADRLDALIDTGADDRFGYFGLR 149
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ + KVVE PQH L+RV+ G+ +DD +D Y +MS+ + +SP
Sbjct: 150 TLHSRYLLRHPITRKVVETPQHFLLRVAAGLAEDDSVRSVDEVAALYGLMSRLDYLPSSP 209
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IR
Sbjct: 210 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 269
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++
Sbjct: 270 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 328
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A WVPD FM RV +G WSLF P + L D WG EF+ +Y E +G A+K
Sbjct: 329 RTHNLNLAHWVPDEFMRRVDADGPWSLFSPADVPELVDLWGEEFDAVYRAAEEKGLARKT 388
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTET 441
+ A+ L+ ++ + +TG +M FKD NR +NQ I SSNLCTEI+E T ET
Sbjct: 389 LPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTATPGHVIHSSNLCTEILEVTDDGET 448
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L FV + D+E+L L++++D
Sbjct: 449 AVCNLGSVNLGAFV------------------DTAAGDIDWERLDRTVRTAVTFLDRVVD 490
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN R RP+G+G GL D F L + F+SPEA+ L+ I E I A +
Sbjct: 491 INFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSPEARTLSTRIAERIMLAAYEA 550
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+++A +GP + + ++G+L PD ++V + W LR I+ G+RNSLL+A
Sbjct: 551 SADLAEDKGPLPAWEKTRTARGVLHPDHYDVDLTWPERWVALRGRIASTGLRNSLLLAIA 610
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 611 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVSDLKRLGVWDERTREALREA 670
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
GSVQ IP++++ +Y+T WEI Q +L+D A R ++DQ+QSLN+ M+ P K++S
Sbjct: 671 GGSVQGFAWIPDDVRRLYRTAWEIPQRSLIDTAAARTPFLDQAQSLNLFMETPTIGKLSS 730
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W +GLKT YYLRSR A + + + + + V T V CSL
Sbjct: 731 MYAYAWKQGLKT-TYYLRSRPAT-----RIARAAQAQPQAQTTVPVQQPTPDEAVACSLE 784
Query: 802 NREECMAC 809
N E C AC
Sbjct: 785 NPESCEAC 792
>gi|455647608|gb|EMF26550.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
gancidicus BKS 13-15]
Length = 772
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 309/788 (39%), Positives = 441/788 (55%), Gaps = 54/788 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR+ +
Sbjct: 26 ADPGRVAAAALRGRSAAADEAELRELATEAAAGLISEDPAYSRLAARLLTLAIRAEAASQ 85
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
SF+ ++ +G + LIAD + +AA LD+ I D + YFG +
Sbjct: 86 GVTSFTGSVA---------TGHREGLIADRTAAFVRLHAARLDALIDTGADDRFGYFGLR 136
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDDIDSAIKT----YHMMSQRWFTHASP 203
TL YLL+ V KVVE PQH L+RV+ G+ +DD A++ Y +MS+ + +SP
Sbjct: 137 TLHSRYLLRHPVTRKVVETPQHFLLRVACGLAEDDSARALEEVAALYGLMSRLDYLPSSP 196
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT PQ+SSC+L+ D ++ +YE + A +SK AGGIG+S +RA GS IR
Sbjct: 197 TLFNSGTRHPQMSSCYLLDSPADELDSLYERYHQVARLSKHAGGIGLSFSRVRARGSLIR 256
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G++
Sbjct: 257 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDAR 315
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV 383
R +L A WVPD FM RV + WSLF P + L D WG EF+ Y E +G A++
Sbjct: 316 RTHNLNLAHWVPDEFMRRVADDAPWSLFSPVDVPELVDLWGEEFDAAYRAAEAKGLARRT 375
Query: 384 VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTET 441
+ A+ L+ ++ + +TG +M FKDT NR +NQ + + SSNLCTEI+E T ET
Sbjct: 376 LPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 435
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L F + D+E+L L++++D
Sbjct: 436 AVCNLGSVNLAAF--------------------ADGDGMDWERLDAAVRTAVTFLDRVVD 475
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+N+YP E A RSN R RP+G+GV GL D + + F+SPEA++L+ I E I A +T
Sbjct: 476 INFYPTEEASRSNSRWRPVGLGVMGLQDVLFRMRLPFDSPEARELSTRIAERIMLAAYET 535
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPM 621
S+ +A + GP + + ++G+L PD + V + W LR I+ G+RN+LL+A
Sbjct: 536 SAALAERHGPLPAWEKTRTARGVLHPDHYGVELAWPERWAALRTRIAATGLRNALLLAIA 595
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 596 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREA 655
Query: 682 DGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTS 741
GSVQ IPE+++ +Y+T WEI Q L+DMA R ++DQ+QSLN+ ++ P K++S
Sbjct: 656 GGSVQDFAWIPEDVRRLYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSS 715
Query: 742 LHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLT 801
++ W +GLKT YYLRS A I +V ++P P+ V CSL
Sbjct: 716 MYAYAWKQGLKT-TYYLRS-RPATRIARAARAAVPVQQPADPQ----------AVACSLE 763
Query: 802 NREECMAC 809
N E C AC
Sbjct: 764 NPESCEAC 771
>gi|441155686|ref|ZP_20966845.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
rimosus subsp. rimosus ATCC 10970]
gi|440617881|gb|ELQ80968.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
rimosus subsp. rimosus ATCC 10970]
Length = 817
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 310/796 (38%), Positives = 445/796 (55%), Gaps = 54/796 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI----AVSNLHKNT 90
DP ++ G + G ++L LA E AA + + P Y+ LAAR+
Sbjct: 54 DPGKIAAAALRGRHAGSDEAELRSLAMEAAAGLIGDEPQYSKLAARLLTRAIAEEAAAEG 113
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDR------DFDYD 144
+FS ++ +G + LIADD E + +AA LD+ + DR D +
Sbjct: 114 ATAFSASVA---------TGHREGLIADDTAEFVRTHAARLDA--LVDRALADGADDRFG 162
Query: 145 YFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWF 198
YFG +TL YLL+ + +V+E PQH L+RV+ G+ +D +D + Y + S +
Sbjct: 163 YFGLRTLHSRYLLRHPISRQVIETPQHFLLRVACGLAEDHSERAVDDVAELYRLTSTLSY 222
Query: 199 THASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRAT 258
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S +RA
Sbjct: 223 LPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRVRAR 282
Query: 259 GSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNH 318
GS IRGTNG SNGIVP LR + + V+QGG +RKGA VYLE WHAD+ EFL L+ N
Sbjct: 283 GSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADLEEFLELRDNT 341
Query: 319 GKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREG 378
G++ R +L A W+PD FM RV+ + WSLF P++ L D +G EF+ Y E G
Sbjct: 342 GEDARRTHNLNIAHWIPDEFMRRVEADADWSLFSPSDVPELVDLYGDEFDTAYRKAEAAG 401
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYT 436
A K V A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T
Sbjct: 402 LAVKQVPARILYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGKVVHSSNLCTEILEVT 461
Query: 437 SPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENL 496
ETAVCNL S+ L + + D+E+L L
Sbjct: 462 DDGETAVCNLGSVNLA--------------AHLGNEANGWEEAMDWERLDATVRTAVTFL 507
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYY 556
++++D+N+YP E A SN R RP+G+G+ GL D F L + F+SPEA++L+ I E I
Sbjct: 508 DRVVDINFYPTEQAGASNSRWRPVGLGLMGLQDVFFRLRLGFDSPEARELSTRISERIML 567
Query: 557 HALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIPSDRW--DWGVLRDMISKNGVR 613
A + S+++A + GP+ + + ++G+L PD + N P RW W LR I+ G+R
Sbjct: 568 AAYEASADLAERHGPHPAWSATRTARGVLHPDHYPNAEP--RWADRWAALRTRIAATGMR 625
Query: 614 NSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPT 673
NSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W
Sbjct: 626 NSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLIEELKALGLWDER 685
Query: 674 IKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQ 733
++ + +GSVQ++ IP E++ +Y+T WEI Q L+DMA DR Y+DQSQSLN+ M
Sbjct: 686 TRDALREGNGSVQELDWIPAEIRELYRTAWEIPQRALIDMAADRTPYLDQSQSLNLFMAS 745
Query: 734 PNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKM 793
P K++S++ W RG+KT YYLRSR A + T + P D E
Sbjct: 746 PTIGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARGTGGGAQPAPVPTQAADPEA-- 802
Query: 794 AQVVCSLTNREECMAC 809
V CSL N E C AC
Sbjct: 803 --VACSLENPESCEAC 816
>gi|302521844|ref|ZP_07274186.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB78]
gi|302430739|gb|EFL02555.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB78]
Length = 790
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/787 (39%), Positives = 442/787 (56%), Gaps = 47/787 (5%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIA----VSNLHKNT 90
DP V+ G ++L ELA E AA + + P Y+ LAAR+ V
Sbjct: 38 DPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRLAARLLALAIVEEAAGQG 97
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
F+ ++ G + LI D E + +AA LD+ I D + YFG +T
Sbjct: 98 ASGFAASVA---------VGHREGLIGDRTAEFVAAHAARLDALIDTGGDDRFGYFGLRT 148
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KVVE PQ+ L+RV+ G+ DD +D Y +MS+ + +SPT
Sbjct: 149 LYSRYLLRHPITRKVVETPQYFLLRVAAGLAADDSLPAVDEVASLYRLMSRLDYLPSSPT 208
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IYE + A +SK AGGIG++ IR+ GS IRG
Sbjct: 209 LFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGGIGIAYSRIRSRGSLIRG 268
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G+++ R
Sbjct: 269 TNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDQRR 327
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
L A W+PD FM RV + +WSLF P + L D WG EFE Y E +G A+K +
Sbjct: 328 THHLNLAHWIPDEFMRRVAADAEWSLFSPADVPELTDLWGEEFEAAYRAAEAKGLARKTI 387
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEIIE T ETA
Sbjct: 388 PARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHSSNLCTEIIEVTDDGETA 447
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL SI L FV N D+E+L E L++++D+
Sbjct: 448 VCNLGSINLGAFV--------------------DNGTIDWERLDETVRTAVTFLDRVVDI 487
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP + A SN R RP+G+G GL D F L + F+S EA+ ++ I E I A + S
Sbjct: 488 NFYPTDEAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAEAKAVSTRIAERIMLAAYEAS 547
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
+++A K GP + + ++G+L PD ++V + W LR I+++G+RNSLL+A P
Sbjct: 548 ADLAEKHGPVPAWEKTRTARGVLHPDHYDVERTWPERWEALRARIARSGMRNSLLLAIAP 607
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W + + +
Sbjct: 608 TATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLKKLGVWDARTREALREAN 667
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ IPEE++ +Y+T WE+ Q L+DMA +R ++DQSQSLN+ M+ P K++S+
Sbjct: 668 GSVQGFNWIPEEVRALYRTAWELPQRGLIDMAAERTAFLDQSQSLNLFMETPTIGKLSSM 727
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W++GLKT YYLRSR A + + + V D E + CSL N
Sbjct: 728 YAHAWNKGLKT-TYYLRSRPATRIARAAGSPAAEAAPIPVQQSVPDAEA----IACSLEN 782
Query: 803 REECMAC 809
E C AC
Sbjct: 783 PESCEAC 789
>gi|318060205|ref|ZP_07978928.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SA3_actG]
gi|318077112|ref|ZP_07984444.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SA3_actF]
Length = 767
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/787 (39%), Positives = 442/787 (56%), Gaps = 47/787 (5%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIA----VSNLHKNT 90
DP V+ G ++L ELA E AA + + P Y+ LAAR+ V
Sbjct: 15 DPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRLAARLLALAIVEEAAGQG 74
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
F+ ++ G + LI D E + +AA LD+ I D + YFG +T
Sbjct: 75 ASGFAASVA---------VGHREGLIGDRTAEFVAAHAARLDALIDTGGDDRFGYFGLRT 125
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KVVE PQ+ L+RV+ G+ DD +D Y +MS+ + +SPT
Sbjct: 126 LYSRYLLRHPITRKVVETPQYFLLRVAAGLAADDSLPAVDEVASLYRLMSRLDYLPSSPT 185
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IYE + A +SK AGGIG++ IR+ GS IRG
Sbjct: 186 LFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGGIGIAYSRIRSRGSLIRG 245
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G+++ R
Sbjct: 246 TNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDQRR 304
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
L A W+PD FM RV + +WSLF P + L D WG EFE Y E +G A+K +
Sbjct: 305 THHLNLAHWIPDEFMRRVAADAEWSLFSPADVPELTDLWGEEFEAAYRAAEAKGLARKTI 364
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEIIE T ETA
Sbjct: 365 PARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHSSNLCTEIIEVTDDGETA 424
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL SI L FV N D+E+L E L++++D+
Sbjct: 425 VCNLGSINLGAFV--------------------DNGTIDWERLDETVRTAVTFLDRVVDI 464
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP + A SN R RP+G+G GL D F L + F+S EA+ ++ I E I A + S
Sbjct: 465 NFYPTDEAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAEAKAVSTRIAERIMLAAYEAS 524
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
+++A K GP + + ++G+L PD ++V + W LR I+++G+RNSLL+A P
Sbjct: 525 ADLAEKHGPVPAWEKTRTARGVLHPDHYDVERTWPERWEALRARIARSGMRNSLLLAIAP 584
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W + + +
Sbjct: 585 TATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLKKLGVWDARTREALREAN 644
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ IPEE++ +Y+T WE+ Q L+DMA +R ++DQSQSLN+ M+ P K++S+
Sbjct: 645 GSVQGFNWIPEEVRALYRTAWELPQRGLIDMAAERTAFLDQSQSLNLFMETPTIGKLSSM 704
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W++GLKT YYLRSR A + + + V D E + CSL N
Sbjct: 705 YAHAWNKGLKT-TYYLRSRPATRIARAAGSPAAEAAPIPVQQSVPDAEA----IACSLEN 759
Query: 803 REECMAC 809
E C AC
Sbjct: 760 PESCEAC 766
>gi|333024514|ref|ZP_08452578.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Streptomyces sp. Tu6071]
gi|332744366|gb|EGJ74807.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Streptomyces sp. Tu6071]
Length = 790
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 309/787 (39%), Positives = 441/787 (56%), Gaps = 47/787 (5%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIA----VSNLHKNT 90
DP V+ G ++L ELA E AA + + P Y+ LAAR+ V
Sbjct: 38 DPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRLAARLLALAIVEEAAGQG 97
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
F+ ++ G + LI D E + +AA LD+ + D + YFG +T
Sbjct: 98 ASGFAASVA---------VGHREGLIGDRTAEFVAAHAARLDALVDTGGDDRFGYFGLRT 148
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KVVE PQ+ L+RV+ G+ DD +D Y +MS+ + +SPT
Sbjct: 149 LYSRYLLRHPITRKVVETPQYFLLRVAAGLAADDSLPAVDEVASLYRLMSRLDYLPSSPT 208
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IYE + A +SK AGGIG++ IR+ GS IRG
Sbjct: 209 LFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGGIGIAYSRIRSRGSLIRG 268
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G+++ R
Sbjct: 269 TNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDQRR 327
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
L A W+PD FM RV + +WSLF P + L D WG EFE Y E +G A+K +
Sbjct: 328 THHLNLAHWIPDEFMRRVAADAEWSLFSPADVPELTDLWGEEFEAAYRAAEAKGLARKTI 387
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEIIE T ETA
Sbjct: 388 PARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHSSNLCTEIIEVTDDGETA 447
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL SI L FV N D+E+L E L++++D+
Sbjct: 448 VCNLGSINLGAFV--------------------DNGTIDWERLDETVRTAVTFLDRVVDI 487
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP + A SN R RP+G+G GL D F L + F+S EA+ ++ I E I A + S
Sbjct: 488 NFYPTDEAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAEAKAVSTRIAERIMLAAYEAS 547
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
++A K GP + + ++G+L PD ++V + W LR I+++G+RNSLL+A P
Sbjct: 548 VDLAEKHGPVPAWEKTRTARGVLHPDHYDVERTWPERWEALRARIARSGMRNSLLLAIAP 607
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W + + +
Sbjct: 608 TATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLKKLGVWDARTREALREAN 667
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ IPEE++ +Y+T WE+ Q L+DMA +R ++DQSQSLN+ M+ P K++S+
Sbjct: 668 GSVQGFNWIPEEVRALYRTAWELPQRGLIDMAAERTAFLDQSQSLNLFMETPTIGKLSSM 727
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W++GLKT YYLRSR A + + + V D E + CSL N
Sbjct: 728 YAHAWNKGLKT-TYYLRSRPATRIARAAGAPAAEAAPIPVQQSVPDAEA----IACSLEN 782
Query: 803 REECMAC 809
E C AC
Sbjct: 783 PESCEAC 789
>gi|254384640|ref|ZP_04999979.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces sp.
Mg1]
gi|194343524|gb|EDX24490.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces sp.
Mg1]
Length = 797
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 311/796 (39%), Positives = 451/796 (56%), Gaps = 63/796 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR+ +
Sbjct: 43 DPGRVAAAALRGRSAAADEAELRSLATEAAAGLISEDPAYSRLAARLLTLAVRDEAAGQG 102
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIY----DRDFDYDYF 146
SFS ++ G + LIAD + +AA LD+ + Y D + +F
Sbjct: 103 ATSFSASVA---------VGHREGLIADRTAAFVEAHAARLDALVEYTLAEGADDRFGFF 153
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + +VVE PQH ++RV+ G+ D+ ++ Y +MS+ +
Sbjct: 154 GLRTLHSRYLLRHPITRQVVETPQHFMLRVACGLAADESVQAVEEVASLYRLMSRLDYLP 213
Query: 201 ASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS
Sbjct: 214 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 273
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G+
Sbjct: 274 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 332
Query: 321 EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKA 380
++ R +L A WVPD FM RV + WSLF P + L D WG +F+ Y E +G A
Sbjct: 333 DQRRTHNLNLAHWVPDEFMRRVNADADWSLFSPADVPELVDLWGDDFDAAYRKAEADGLA 392
Query: 381 KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ-QNLGTI-KSSNLCTEIIEYTSP 438
+K + A++L+ ++ + +TG +M FKD NR +NQ GT+ SSNLCTEIIE T+
Sbjct: 393 RKTMPARDLYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGTVVHSSNLCTEIIEVTND 452
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
ETAVCNL S+ L FV ++ D+E+L E L++
Sbjct: 453 GETAVCNLGSVNLGAFVL------------------TETGEIDWERLDETVRTAVTFLDR 494
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
++D+N+YP E A RSN R RP+G+G GL D F L + F+SPEA+ L+ + E I A
Sbjct: 495 VVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLKLPFDSPEAKALSTKLSERIMLAA 554
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS--DRWDWGVLRDMISKNGVRNSL 616
+ S ++A + GP + + ++G+L PD ++ + +RWD LR ++++G+RNSL
Sbjct: 555 YEASCDLAERSGPLPAWEQTRTARGVLHPDHYDTELNWPERWD--ALRARVAESGMRNSL 612
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W +
Sbjct: 613 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNGYLVEELKKLGVWDAQSRE 672
Query: 677 KIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNF 736
+ GSVQ IP E++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P
Sbjct: 673 ALREASGSVQGFGWIPAEVRELYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 732
Query: 737 KKVTSLHFRTWSRGLKTGMYYLRSRAA---ADAIKFTVDTSVFKEKPEKPELVVDDETKM 793
K++S++ W +GLKT YYLRSR A A A + ++ P+ VVD E
Sbjct: 733 GKLSSMYAYAWKQGLKT-TYYLRSRPATKIARAAQAATPVAL-------PQAVVDAEA-- 782
Query: 794 AQVVCSLTNREECMAC 809
+ CSL N E C AC
Sbjct: 783 --LACSLENPESCEAC 796
>gi|297202282|ref|ZP_06919679.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sviceus ATCC 29083]
gi|197710198|gb|EDY54232.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sviceus ATCC 29083]
Length = 796
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 303/777 (38%), Positives = 440/777 (56%), Gaps = 64/777 (8%)
Query: 54 SQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERS 109
++L ELA E AA + + P Y+ LAAR+ ++ SF+ ++
Sbjct: 62 AELRELATEAAAGLISEDPAYSRLAARLLTVSIAAEAASQGVTSFTGSVA---------V 112
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERP 167
G + LIAD E + +A LD+ + + D + YFG +TL YLL+ + KV+E P
Sbjct: 113 GHREGLIADRTAEFVRVHAERLDALVDTEADDRFGYFGLRTLYSRYLLRHPITRKVIETP 172
Query: 168 QHMLMRVSIGIHKDDI----------DSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSS 217
QH ++RV+ G+ D + D Y +MS+ + +SPTLFN+GT PQ+SS
Sbjct: 173 QHFMLRVASGLADDTVLDSETGAHALDEVAALYRLMSRLDYLPSSPTLFNSGTRHPQMSS 232
Query: 218 CFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IRGTNG SNGIVP L+
Sbjct: 233 CYLLDSPKDELDSIYDRYHQVANLSKHAGGIGISYSRIRSRGSLIRGTNGHSNGIVPFLK 292
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDL 337
+ + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++ R +L A WVPD
Sbjct: 293 TLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHNLNLAHWVPDE 351
Query: 338 FMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQ 397
FM RV + +WSLF P + L D WG EF+ Y E EG A++ + A++L+ ++ +
Sbjct: 352 FMRRVNADAEWSLFSPADVPELVDLWGEEFDAAYRKAEAEGLARRTIPARDLYGRMMRTL 411
Query: 398 IETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
+TG +M FKD NR +NQ L T+ SSNLCTEI+E T ETAVCNL S+ L FV
Sbjct: 412 AQTGNGWMTFKDAANRTANQTALPGHTVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFV 471
Query: 456 REKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL 515
+ + D+E+L L++++D+N+YP E A RSN
Sbjct: 472 ------------------DTTSGDIDWERLDATVRTAVTFLDRVVDINFYPTEQAGRSNA 513
Query: 516 RHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETY 575
+ RP+G+G GL D F L + F+SPEA+ L+ I E I A + S+++A + GP +
Sbjct: 514 KWRPVGLGAMGLQDVFFKLRLPFDSPEARALSTRIAERIMLAAYEASADLAERSGPLPAW 573
Query: 576 HNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+ ++G+L PD + + W LR+ ++ G+RNSLL+A PTA+ + I G EC
Sbjct: 574 EKTRTAQGVLHPDHYATDLAWPERWAALRERMAVTGLRNSLLLAIAPTATIASIAGVYEC 633
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP SN++ R LSGEF+ VN +L+ +L ++G+W + + +GSVQ IPE++
Sbjct: 634 IEPQVSNLFKRETLSGEFLQVNSYLVAELKKLGVWDARTREALREANGSVQGFAWIPEDV 693
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ +Y+T WEI Q L+DMA R ++DQ+QSLN+ ++ P K++S++ W GLKT
Sbjct: 694 RALYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSSMYAYAWKSGLKT-T 752
Query: 756 YYLRSRAA---ADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
YYLRSR A A A + TV V + PE V CSL N E C AC
Sbjct: 753 YYLRSRPATRIARAAQATV--PVQQPAPED------------AVACSLENPESCEAC 795
>gi|408680595|ref|YP_006880422.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Streptomyces venezuelae ATCC 10712]
gi|328884924|emb|CCA58163.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Streptomyces venezuelae ATCC 10712]
Length = 792
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/785 (38%), Positives = 439/785 (55%), Gaps = 43/785 (5%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNT--KK 92
DP V+ G ++L ELA E AA + P Y+ LAAR+ + +
Sbjct: 40 DPGKVAAAALRGRSAAADEAELRELATEAAAGLIAEDPAYSRLAARLLTVTIADEAAGQG 99
Query: 93 SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLE 152
+FS + H R GL IAD E + +A LD+ I D + YFG +TL
Sbjct: 100 AFSFSASVAVGH---REGL----IADRTAEFVALHADRLDATIDPAGDDRFGYFGLRTLY 152
Query: 153 RSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPTLF 206
YLL+ + KV+E PQH ++RV+ G+ +DD +D Y +MS+ + +SPTLF
Sbjct: 153 SRYLLRHPITRKVIETPQHFMLRVACGLAEDDSVRALDEVSALYGLMSRLDYLPSSPTLF 212
Query: 207 NAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTN 266
N+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS IRGTN
Sbjct: 213 NSGTRHPQMSSCYLLDSPQDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGSLIRGTN 272
Query: 267 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRAR 326
G SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G++ R
Sbjct: 273 GHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARRTH 331
Query: 327 DLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQA 386
+L A W+PD FM RV + WSLF P + L D WG EF+ Y E G A+K + A
Sbjct: 332 NLNLAHWIPDEFMRRVNADADWSLFSPADVPELVDLWGEEFDAAYRKAEAAGLARKTMPA 391
Query: 387 QNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETAVC 444
++L+ ++ + +TG +M FKD NR +NQ + T+ SSNLCTEI+E T ETAVC
Sbjct: 392 RDLYGRMMRTLAQTGNGWMTFKDASNRTANQTAEPGHTVHSSNLCTEILEVTDDGETAVC 451
Query: 445 NLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNY 504
NL S+ L FV D+ D+E+L L++++D+N+
Sbjct: 452 NLGSVNLGAFVVGSDI--------------------DWERLDATVRTAVTFLDRVVDINF 491
Query: 505 YPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSE 564
YP E A RSN R RP+G+G GL D F L + F+S EA+ L+ I E I A + S++
Sbjct: 492 YPTEQAGRSNARWRPVGLGAMGLQDVFFQLKLPFDSAEARALSTRIAERIMLAAYEASAD 551
Query: 565 IAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTA 624
+A + GP + + ++G+L PD ++V + W LR+ I+ G+RNSLL+A PTA
Sbjct: 552 LAERNGPLPAWEKTRTARGVLHPDHYDVELNWPERWAALRERIAAVGMRNSLLLAIAPTA 611
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGS 684
+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W + + +GS
Sbjct: 612 TIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKKLGVWDAQTREALRESNGS 671
Query: 685 VQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHF 744
V +P E++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P K++S++
Sbjct: 672 VAGFTWVPAEVRELYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSSMYA 731
Query: 745 RTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNRE 804
W +GLKT YYLRSR A + + + D + + CSL N E
Sbjct: 732 YAWKQGLKT-TYYLRSRPATRIARAAQAAAPAAATIPVQQATPDADA----LACSLENPE 786
Query: 805 ECMAC 809
C AC
Sbjct: 787 SCEAC 791
>gi|345848583|ref|ZP_08801603.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
zinciresistens K42]
gi|345639928|gb|EGX61415.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
zinciresistens K42]
Length = 767
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 304/789 (38%), Positives = 443/789 (56%), Gaps = 50/789 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKS 93
DP V+ G ++L ELA E AA + + P Y+ LAAR+ ++ ++
Sbjct: 15 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTLSI---AAEA 71
Query: 94 FSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLER 153
S+ + +G + LIAD + +AA LD+ + D + YFG +TL
Sbjct: 72 ASQGVTSFTGSVG--TGHREGLIADRTAAFVRTHAARLDALVDPGADDRFGYFGLRTLHS 129
Query: 154 SYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPTLFN 207
YLL+ + KVVE PQH L+RV+ G+ +DD ++ Y +MS+ + +SPTLFN
Sbjct: 130 RYLLRHPLTRKVVETPQHFLLRVAAGLAEDDSARSLEEVAALYGLMSRLDYLPSSPTLFN 189
Query: 208 AGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNG 267
+GT PQ+SSC+L+ D ++ +Y+ + A +SK AGGIG+S +R+ GS IRGTNG
Sbjct: 190 SGTRHPQMSSCYLLDSPKDELDSLYDRYHQVARLSKHAGGIGLSYSRVRSRGSLIRGTNG 249
Query: 268 TSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARD 327
SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++ R +
Sbjct: 250 HSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHN 308
Query: 328 LFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQ 387
L A W+PD FM RV + WSLF P++ L D WG EF+ Y E G A++ + A+
Sbjct: 309 LNLAHWIPDEFMRRVDADRPWSLFSPSDVPELVDLWGEEFDAAYAKAEAAGLARRTLPAR 368
Query: 388 NLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL--GTIKSSNLCTEIIEYTSPTETAVCN 445
L+ ++ + +TG +M FKD NR +NQ L + SSNLCTEI+E T ETAVCN
Sbjct: 369 ELYGRMMRTLAQTGNGWMTFKDAANRTANQTALPGNVVHSSNLCTEILEVTDDGETAVCN 428
Query: 446 LASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYY 505
L S+ L FVR+ D+ D+E+L E L++++D+N+Y
Sbjct: 429 LGSVNLGAFVRDGDL--------------------DWERLDETVRTAVTFLDRVVDINFY 468
Query: 506 PVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEI 565
P E A RSN + RP+G+G GL D F L + F+SPEA+ L+ I E + A + S+++
Sbjct: 469 PTEQAGRSNAKWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTRIAERVMLAAYEASADL 528
Query: 566 AAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTAS 625
A + GP + + ++G+L PD + P+ W LR+ I+ G+RNSLL+A PTA+
Sbjct: 529 AERNGPLPAWEKTRTARGVLHPDHYGTAPAWPERWAALRERIAVTGLRNSLLLAIAPTAT 588
Query: 626 TSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSV 685
+ I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W + + GSV
Sbjct: 589 IASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKALGVWDARTREALRDASGSV 648
Query: 686 QKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFR 745
Q IP +++ +Y+T WEI Q L+DMA R Y+DQSQSLN+ ++ P K++S++
Sbjct: 649 QDFAWIPADVRALYRTAWEIPQRALIDMAAARTPYLDQSQSLNLFLETPTIGKLSSMYAY 708
Query: 746 TWSRGLKTGMYYLRS-----RAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSL 800
W GLKT YYLRS A A + + +V + PE V CSL
Sbjct: 709 AWKSGLKT-TYYLRSRPATRIARAARAQARPEATVPVRQAADPE----------AVACSL 757
Query: 801 TNREECMAC 809
N E C AC
Sbjct: 758 ENPESCEAC 766
>gi|386845601|ref|YP_006263614.1| ribonucleoside-diphosphate reductase subunit alpha [Actinoplanes
sp. SE50/110]
gi|359833105|gb|AEV81546.1| ribonucleoside-diphosphate reductase alpha chain [Actinoplanes sp.
SE50/110]
Length = 822
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 299/771 (38%), Positives = 446/771 (57%), Gaps = 44/771 (5%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ GL + DP+ V+ K +G+Y G TT +LD+L+
Sbjct: 18 MRVRKRNGEFEPVDVNKIVTAVERWITGL--DEVDPLRVATKTISGLYDGATTEELDKLS 75
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + + + ++ +FSE+I+ G LI
Sbjct: 76 IQTAAELIGEEPQYSRLAARLLIDLVEQEVREQGATTFSESIE---------LGFAQGLI 126
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
DD + ++ + A LD+ + D ++YFG +T+ YLL+ ++ VE PQ+ LMRV
Sbjct: 127 GDDAHAFVVAHRAELDAAVDVANDLRFEYFGLRTVADRYLLRHPIKRVPVETPQYFLMRV 186
Query: 175 SIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ G+ + AI Y +M+ + +SPTLFN+GT Q+SSCFLV D ++ IYE
Sbjct: 187 ACGLSQT-AQEAIGFYRLMASLAYLPSSPTLFNSGTRHTQMSSCFLVDSPKDELDSIYER 245
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG++ +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 246 YHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGKSNGIVPFLKTLDAGVAAVNQGG-RRK 304
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA VYLEPWH D+ EFL L+ N G+E R +L A W+PD FM RV+ + WSL P+
Sbjct: 305 GAACVYLEPWHPDVEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADEDWSLIDPS 364
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRK 414
+A L D +G F + Y E+ KA K ++A+ L+ ++ + +TG +M FKD N
Sbjct: 365 DAPELPDLFGDAFTEAYRIAEK--KAVKKIKARELYGRMMRTLAQTGNGWMTFKDRSNAL 422
Query: 415 SNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGS 472
SNQ TI SNLCTEI+E S ETAVCNL SI L V
Sbjct: 423 SNQTGAPGNTIHLSNLCTEILEVNSDDETAVCNLGSINLGAHTTADGV------------ 470
Query: 473 RGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+E+L L+++ID+NYYP + A SN R RP+G+G+ GL D F
Sbjct: 471 --------DWERLRATVRTAVVFLDRVIDINYYPSQQAAVSNPRWRPVGLGLMGLQDAFF 522
Query: 533 LLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNV 592
L + F+SP A++L+ + E I+ +L+ S+ +A + G + Y + ++G L P++W
Sbjct: 523 TLRLPFDSPAAKELSTRVQEEIFLTSLEASAGLAEQFGAHPAYAETRAAQGDLHPELWGA 582
Query: 593 IPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+ W +++ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 583 PMTQGARWAAVKERIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 642
Query: 653 FVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVD 712
F+ +N +L+ +L G+W+P I+ I +GSVQ I +P ++K I++T WE+ Q L+D
Sbjct: 643 FLQINNYLVRELKSRGLWTPEIREAIKRAEGSVQDIAALPADVKEIFRTAWELPQRALID 702
Query: 713 MAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAA 763
+A R +IDQSQSLN+ + P K++S++ W GLKT YYLRSR A
Sbjct: 703 LAAARAPFIDQSQSLNLFLAAPTIGKLSSMYLYAWKSGLKTS-YYLRSRPA 752
>gi|453055153|gb|EMF02600.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 805
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 308/794 (38%), Positives = 448/794 (56%), Gaps = 51/794 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK-- 92
DP V+ G + G ++L LA E AA + + P+Y+ LAAR+ + +
Sbjct: 43 DPGKVAAAALRGRHPGSDEAELRSLATEAAAGLISEEPEYSRLAARLLTLAIAEEAAGQG 102
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFD----YDYF 146
SFS ++ +G + LIADD + ++A LD+ + + YF
Sbjct: 103 AVSFSASVA---------TGHREGLIADDTAAFVREHAERLDALVDAALADGADDRFGYF 153
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + V+E PQH L+RV+ G+ +D ++ + Y + S +
Sbjct: 154 GLRTLHSRYLLRHPITRNVIETPQHFLLRVACGLAEDHSVRALEDVAELYRLTSTLSYLP 213
Query: 201 ASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IR+ GS
Sbjct: 214 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGS 273
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGK 320
IRGTNG SNGIVP LR + + V+QGG +RKGA VYLE WHADI EFL L+ N G+
Sbjct: 274 LIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADIEEFLELRDNTGE 332
Query: 321 EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKA 380
E R +L A W+PD FM RV+ + WSLF P + L D +G EF+ Y YE EGKA
Sbjct: 333 EARRTHNLNIAHWIPDEFMRRVEADADWSLFSPADTPDLVDLYGDEFDAAYRRYEAEGKA 392
Query: 381 KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSP 438
K + A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T+
Sbjct: 393 VKTIPARVLYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGQVVHSSNLCTEILEVTND 452
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
ETAVCNL S+ L +H +G+ G D+EKL L++
Sbjct: 453 GETAVCNLGSVNL-----------AAH----LGADGE----MDWEKLDRTVRTAVTFLDR 493
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
++D+N+YP E A SN R RP+G+G+ GL D F L + F+SPEA+ L+ I E I A
Sbjct: 494 VVDINFYPTEQAGSSNSRWRPVGLGLMGLQDVFFRLRLPFDSPEAKALSTRISERIMLAA 553
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMW-NVIPS--DRWDWGVLRDMISKNGVRNS 615
+ S+++A + GP+ + + ++G+L PD + N P+ +RWD LR I+ G+RNS
Sbjct: 554 YEASADLAERHGPHPAWSATRTARGVLHPDHYPNTEPTWAERWD--ALRARIASVGMRNS 611
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIK 675
LL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W +
Sbjct: 612 LLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNTYLVEDLKKLGVWDRATR 671
Query: 676 NKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPN 735
+ + +GS+Q + IP+E++ +Y+T WEI Q L+DMA R Y+DQSQSLN+ M P
Sbjct: 672 DAMTDANGSIQDMAWIPQEVRDLYRTAWEIPQRALIDMAAARTPYLDQSQSLNLFMASPT 731
Query: 736 FKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQ 795
K++S++ W +G+KT YYLRSR A + + V
Sbjct: 732 IGKLSSMYAYAWKQGIKT-TYYLRSRPATRIARAASGGAAASSSAPATVPVQQAAPDADA 790
Query: 796 VVCSLTNREECMAC 809
+ CSL N E C AC
Sbjct: 791 IACSLENPESCEAC 804
>gi|297192179|ref|ZP_06909577.1| class Ia ribonucleotide-diphosphate reductase large subunit protein
[Streptomyces pristinaespiralis ATCC 25486]
gi|297151244|gb|EDY64084.2| class Ia ribonucleotide-diphosphate reductase large subunit protein
[Streptomyces pristinaespiralis ATCC 25486]
Length = 800
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 304/789 (38%), Positives = 437/789 (55%), Gaps = 57/789 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G G ++L LA E AA + + P Y+ LAAR+ + +
Sbjct: 54 DPGKVAAAALRGRNAGSDAAELHSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 113
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
SF+ ++ +G + LIAD + +AA LD+ I D + YFG +T
Sbjct: 114 ASSFTASVA---------TGHREGLIADRTAAFVALHAARLDALIDLGADDRFGYFGLRT 164
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDDIDSAIKT----YHMMSQRWFTHASPT 204
L YLL+ + +V+E PQH ++RV+ G+ +DD A++ Y +MS+ + +SPT
Sbjct: 165 LYSRYLLRHPITRQVIETPQHFMLRVACGLAEDDSPRALEEVAALYRLMSRLDYLPSSPT 224
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IY + A +SK AGGIG+S IRA GS IRG
Sbjct: 225 LFNSGTRHPQMSSCYLLDSPLDELDSIYGRYHQVARLSKHAGGIGLSYSRIRARGSLIRG 284
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G++ R
Sbjct: 285 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARR 343
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A W+PD FM RV+ + QWSLF P + L D WG +F+ Y E G A++ V
Sbjct: 344 THNLNLAHWIPDEFMRRVEADAQWSLFSPVDVPELVDLWGEDFDAAYRRAEAAGLARRTV 403
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETA 442
A++L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T ETA
Sbjct: 404 SARDLYGRMMRTLAQTGNGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTDDGETA 463
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L FV + D+E+L L++++D+
Sbjct: 464 VCNLGSVNLGAFVSGDGI--------------------DWERLDATVRTAVTFLDRVVDI 503
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP E A RSN R RP+G+G GL D F L + F+S EA+ L+ I E I A + S
Sbjct: 504 NFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSAEARALSTRIAERIMLAAYEAS 563
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
++A + GP + + ++G+L PD ++ + W LR ++ G+RNSLL+A P
Sbjct: 564 CDLAERNGPLPAWAETRTARGVLHPDHYDTTLNWPERWEALRARVAAVGMRNSLLLAIAP 623
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 624 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLKRLGVWDAQTREALREAS 683
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ +PEE++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P K++S+
Sbjct: 684 GSVQGFTWVPEEIRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSSM 743
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK--PEKPELVVDDETKMAQVVCSL 800
+ W +GLKT YYLRSR A + + PE V CSL
Sbjct: 744 YAYAWKQGLKT-TYYLRSRPATRIARAASAAVPVPAQVTPED------------AVACSL 790
Query: 801 TNREECMAC 809
N E C AC
Sbjct: 791 ENPESCEAC 799
>gi|38344004|emb|CAC17631.2| class I ribonucleotide-diphosphate reductase large chain
[Streptomyces microflavus]
Length = 793
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 305/787 (38%), Positives = 440/787 (55%), Gaps = 49/787 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK-- 92
DP V+ G + G T++L ELA E AA + P Y+ LAAR+ + +
Sbjct: 43 DPGRVAAAALRGRHPGSDTAELRELATEAAAGLIAEDPAYSRLAARLLTLTIAEEAAGQG 102
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
SFSE++ +G + LIA+ E +A LDS I D + YFG +T
Sbjct: 103 AVSFSESVA---------TGHREGLIAERTAEFAALHADRLDSAIDPAGDDRFGYFGLRT 153
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KV+E PQH ++ V+ G+ +DD +D Y +MS+ + +SPT
Sbjct: 154 LYSRYLLRHPITRKVIETPQHFMLGVAAGLAEDDSVRALDEVTALYGLMSRLDYLPSSPT 213
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG++ IRA GS IRG
Sbjct: 214 LFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 273
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G++ R
Sbjct: 274 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARR 332
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A W+PD FM RV + WSLF P + L D +GAEF+ Y E +G A+K +
Sbjct: 333 THNLNLAHWIPDEFMRRVNADADWSLFSPADVPELVDLYGAEFDAAYVAAEAKGLARKTM 392
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEIIE T ETA
Sbjct: 393 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTAEPGSVVHSSNLCTEIIEVTDDGETA 452
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L FV + + D+E+L L++++D+
Sbjct: 453 VCNLGSVKLGAFV------------------DTASGELDWERLDATVRTAVTFLDRVVDI 494
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP E A RSN R RP+G+G GL D F L + F+S EA+ L+ I E I A + S
Sbjct: 495 NFYPTEQAGRSNSRWRPVGLGAMGLQDVFFQLKLPFDSAEARALSTRISERIMLAAYEAS 554
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
+++A + GP + + ++G+L D ++V + W LR I++ G+RNSLL+A P
Sbjct: 555 ADLAERNGPLPAWDKTRTARGVLHHDHYDVELTWPERWAALRARIAEVGMRNSLLLAIAP 614
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W + +
Sbjct: 615 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKRLGVWDAETREALRESS 674
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ +P E + +Y+T WEI Q L+DMA R ++DQ+QSLN+ M+ P K++S+
Sbjct: 675 GSVQDFAWVPAETRALYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFMETPTIGKLSSM 734
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W +GLKT YYLRSR A + + + + P+ + CSL N
Sbjct: 735 YAYAWKQGLKT-TYYLRSRPATRIARAARAAAPVPAQSQAPD--------ADAIACSLEN 785
Query: 803 REECMAC 809
E C AC
Sbjct: 786 PESCEAC 792
>gi|254388986|ref|ZP_05004217.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
clavuligerus ATCC 27064]
gi|294814922|ref|ZP_06773565.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
gi|326443294|ref|ZP_08218028.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
clavuligerus ATCC 27064]
gi|197702704|gb|EDY48516.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
clavuligerus ATCC 27064]
gi|218078698|emb|CAB90707.4| class Ia ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces clavuligerus ATCC 27064]
gi|294327521|gb|EFG09164.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
Length = 810
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 310/789 (39%), Positives = 440/789 (55%), Gaps = 52/789 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK-- 92
DP V+ G + G ++L LA + AA + P Y+ LAAR+ + +
Sbjct: 59 DPGRVAAAALRGRHPGSDAAELRGLATDAAAGLIAEDPAYSRLAARLLTLTIGDEARSQG 118
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
SFS ++ G LIAD + ++A LD+ I D D + YFG +T
Sbjct: 119 AVSFSASVA---------VGHTEGLIADRTAAFVALHSARLDALIDLDADDRFGYFGLRT 169
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KVVE PQH ++RV+ G+ +DD +D Y +MS+ + +SPT
Sbjct: 170 LYSRYLLRHPITRKVVETPQHFMLRVACGLAEDDTERALDEVAALYRLMSRLDYLPSSPT 229
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IY + A +SK AGGIG+S IR+ GS IRG
Sbjct: 230 LFNSGTRHPQMSSCYLLDSPQDELDSIYGRYHQVARLSKHAGGIGLSYSRIRSRGSLIRG 289
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G++ R
Sbjct: 290 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARR 348
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A W+PD FM RVQ + +WSLF P + L D WG EF+ Y E G A++ +
Sbjct: 349 THNLNLAHWIPDEFMRRVQADTEWSLFSPADVPELVDLWGDEFDAAYRKAEAAGLARRTL 408
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ L T+ SSNLCTEI+E T ETA
Sbjct: 409 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 468
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L FV D+ D+E+L L++++D+
Sbjct: 469 VCNLGSVNLGAFVSGGDI--------------------DWERLDATVRTAVTFLDRVVDI 508
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
N+YP E A RSN + RP+G+G GL D F L + F+S EA+ L+ I E I A + S
Sbjct: 509 NFYPTEQAGRSNTKWRPVGLGAMGLQDVFFQLRLPFDSAEARALSTRIAERIMLAAYEAS 568
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWD--WGVLRDMISKNGVRNSLLVAP 620
+++A + GP + + ++G+L PD + V W W LR+ ++ G+RNSLL+A
Sbjct: 569 ADLAERHGPLPAWEKTRTARGVLHPDHYGV--EQHWPERWAALRERVATTGMRNSLLLAI 626
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W + +
Sbjct: 627 APTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVAELKRLGVWDAQTREALRD 686
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
GS+Q +P+E++ +Y+T WEI Q L+DMA R YIDQSQSLN+ M+ P K++
Sbjct: 687 ASGSIQGFNWVPDEVRELYRTAWEIPQRGLIDMAAARTPYIDQSQSLNLFMETPTIGKLS 746
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSL 800
S++ W +GLKT YYLRSR A + T+ + V D V CSL
Sbjct: 747 SMYAYAWKQGLKT-TYYLRSRPATRIARAASGTAAAAPATVPVQQVPQD-----AVACSL 800
Query: 801 TNREECMAC 809
N E C AC
Sbjct: 801 ENPESCEAC 809
>gi|357411277|ref|YP_004923013.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
flavogriseus ATCC 33331]
gi|320008646|gb|ADW03496.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
flavogriseus ATCC 33331]
Length = 797
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 312/813 (38%), Positives = 455/813 (55%), Gaps = 62/813 (7%)
Query: 19 TARLKKLSYGLSTE--HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
TA L+ L+ GL+ + DP V+ G ++L LA E AA + + P Y+
Sbjct: 24 TALLRTLT-GLTADLPDTDPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPSYSR 82
Query: 77 LAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLD 132
LAAR+ + SFS ++ G + LIAD E + +AA LD
Sbjct: 83 LAARLLTRAVADEAAGQGAVSFSASVA---------VGHREGLIADRTAEFVTLHAAALD 133
Query: 133 SEIIYDR------DFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDDID 184
+ + DR D + YFG +TL YLL+ + +V E PQH ++RV+ G+ +D +
Sbjct: 134 A--LVDRALADGADDRFGYFGLRTLHSRYLLRHPLTRQVTETPQHFMLRVAAGLAEDTSE 191
Query: 185 SAIKT----YHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
A++ Y +M++ + +SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A
Sbjct: 192 RALEEVAALYGLMNRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPMDELDSIYDRYHQVAR 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SK AGGIG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVY
Sbjct: 252 LSKHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVY 310
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LE WHADI EFL L+ N G+++ R +L A W+PD FM RV + QWSLF P +A L
Sbjct: 311 LETWHADIEEFLELRDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTQWSLFSPADAPELV 370
Query: 361 DCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--Q 418
D WG EF+ Y E +G A++ + A+ L+ ++ + +TG +M FKD NR +NQ +
Sbjct: 371 DLWGDEFDAAYRAAEAKGLARRTLPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAE 430
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
+ SSNLCTEI+E T ETAVCNL S+ L FV E +
Sbjct: 431 PGRVVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFVAEGTI------------------ 472
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
D+E+L L++++D+N+YP E A RSN R RP+G+G GL D F L + F
Sbjct: 473 --DWERLDATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPF 530
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN--VIPSD 596
+SPEA+ L+ I E I A + S ++A + GP + + ++G+L PD ++ + +
Sbjct: 531 DSPEARALSTKISERIMLAAYEASCDLAERSGPLPAWSETRAARGVLHPDHYDTELHWPE 590
Query: 597 RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
RWD LR +++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ V
Sbjct: 591 RWD--ALRARVARTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQV 648
Query: 657 NKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVD 716
N +L+ +L ++G+W + + GSVQ IPE+++ +Y+T WEI Q L+DMA
Sbjct: 649 NAYLVDELKKLGVWDARTREALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAA 708
Query: 717 RGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVF 776
R ++DQSQSLN+ ++ P K++S++ W +GLKT YYLRSR A + +
Sbjct: 709 RTPFLDQSQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQAPA 767
Query: 777 KEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
D + + CSL N E C AC
Sbjct: 768 AATVPVQASAPDADA----LACSLENPESCEAC 796
>gi|256391239|ref|YP_003112803.1| ribonucleoside-diphosphate reductase subunit alpha [Catenulispora
acidiphila DSM 44928]
gi|256357465|gb|ACU70962.1| ribonucleoside-diphosphate reductase, alpha subunit [Catenulispora
acidiphila DSM 44928]
Length = 841
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 302/781 (38%), Positives = 437/781 (55%), Gaps = 57/781 (7%)
Query: 39 VSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK----KSF 94
V +K AG+ G Q+ +LA ++AA + P Y+ LAAR+ + + SF
Sbjct: 107 VVRKTFAGLPPGAGADQVADLAVQSAAELIGEEPQYSKLAARLLSGVIAREAAGQGATSF 166
Query: 95 SETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERS 154
S ++ G + LI D +I AA D+ I D ++YFG +T+
Sbjct: 167 SASVA---------VGHREGLIGDVTEALITGAAARFDAAIDPAGDLRFEYFGLRTVYDR 217
Query: 155 YLLK--VQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR 212
YLL+ V +V+E PQH L+RV+ G+ +D A+ Y +MS + +SPTLFN+GT
Sbjct: 218 YLLRHPVTRRVIETPQHFLLRVAAGLSQDP-QEAVGFYRLMSSLAYLPSSPTLFNSGTRH 276
Query: 213 PQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGI 272
Q+SSC+LV D ++ IY+ + A +SK AGGIG+ +R+ G+ IR TNG SNGI
Sbjct: 277 TQMSSCYLVDSPLDELDSIYDRYHQVARLSKFAGGIGIGFSRVRSRGALIRSTNGRSNGI 336
Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYAL 332
VP LR + + V+QGG +RKGA VYLEPWH DI EFL L+ N G++ R +L A
Sbjct: 337 VPFLRTLDSSVAAVNQGG-RRKGAACVYLEPWHPDIEEFLQLRDNTGEDARRTHNLNLAN 395
Query: 333 WVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFE 392
W+PD FM RV+ +G WSL P++ L D WGAEF+ Y E EG+ + V A+ L+ +
Sbjct: 396 WIPDEFMRRVEADGVWSLMDPDQVPELPDLWGAEFDAAYRKAEAEGRYSRQVSARELYGK 455
Query: 393 ILTSQIETGTPYMLFKDTCNRKSNQQNL--GTIKSSNLCTEIIEYTSPTETAVCNLASIA 450
++ + +TG +M FKD N+ NQ + T+ SNLCTEIIE +S TETAVCNL SI
Sbjct: 456 MMRTLAQTGNGWMTFKDASNQLCNQTGVPGNTVHLSNLCTEIIEVSSDTETAVCNLGSIN 515
Query: 451 LPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETA 510
L + P+R D+++L L+++ID+NYYP E
Sbjct: 516 LAAHL---------TPARDA---------VDWDRLRATVRTAVVFLDRVIDINYYPSEQT 557
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG 570
SN R RP+G+G+ GL D F L + F+ A++L+ I E IY AL+TS+ +A + G
Sbjct: 558 AASNPRWRPVGLGLMGLQDVFFALRLPFDDERARELSTRISEEIYLTALETSAGLAEEFG 617
Query: 571 PYETYHNSPVSKGILQPDMWNVI--PSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQ 628
+ + ++ +KG LQPD+WNV P W +R ++ G+RNSLLVA PTA+ +
Sbjct: 618 AHPAFADTRAAKGDLQPDLWNVATSPELATRWNAVRGRVAATGLRNSLLVAIAPTATIAS 677
Query: 629 ILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKI 688
I G EC EP SN++ R LSGEF+ +N L+ +L +G+W+P ++ I +GSVQ +
Sbjct: 678 IAGCYECIEPQVSNLFKRETLSGEFLQINSALVGELKALGLWTPAVREAIKRAEGSVQGV 737
Query: 689 PEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWS 748
+P E++ +Y+T WE+ Q L+D+A RG +IDQSQSLN+ + P K++S++ W
Sbjct: 738 EALPAEVRALYRTAWELPQRALIDLAAARGPFIDQSQSLNLFLAAPTIGKLSSMYMYAWK 797
Query: 749 RGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMA 808
GLK+ YYLRSR A + + V CSL N E C A
Sbjct: 798 AGLKS-TYYLRSRPAT-----------------RIQQATVAVAAEEAVACSLENPESCEA 839
Query: 809 C 809
C
Sbjct: 840 C 840
>gi|269839639|ref|YP_003324331.1| ribonucleoside-diphosphate reductase subunit alpha [Thermobaculum
terrenum ATCC BAA-798]
gi|269791369|gb|ACZ43509.1| ribonucleoside-diphosphate reductase, alpha subunit [Thermobaculum
terrenum ATCC BAA-798]
Length = 819
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 312/804 (38%), Positives = 463/804 (57%), Gaps = 56/804 (6%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
VV +G + D++ L+ GL CDP ++ +V +Y VT Q+
Sbjct: 15 VVSPEGGLVPLDPDRVRRHLQHACRGLP--ECDPDELANEVVRSLYDRVTPEQIRSAMIL 72
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNT------KKSFSETIKDMYNHYNERSGLKAPLI 116
A A P Y +A+R+ + +++ + + + T ++M+ Y + A +
Sbjct: 73 AARARIERDPAYDKVASRLMLEQIYQESWGWVPSEAELAATYREMFPRY-----VHACIS 127
Query: 117 ADDIYEIIMK-NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
A + E + + + A L S + +RD Y G +TL YLL V+G+ +E PQ+ MRV+
Sbjct: 128 AGRLSEELARFDLARLASALRPERDEKLRYIGLQTLYDRYLLDVEGRRLEAPQYFWMRVA 187
Query: 176 IGI--HKDDIDS-AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ +DD ++ A + Y ++S F A+PTLFN+GTP PQLSSC+L ++DD +E I+
Sbjct: 188 MGLALREDDPNARAAQFYDLLSSLRFVSATPTLFNSGTPHPQLSSCYLSTVEDD-LEHIF 246
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ + + A +SK AGG+G +RATG+ IRGT+G S G++P L++ NDTA V+QGG K
Sbjct: 247 KVIGDNAKLSKWAGGLGNDWTRVRATGALIRGTHGKSQGVIPFLKIVNDTAVAVNQGG-K 305
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLEPWH D EFL L+KN G E R D+ A WVPDLFM RVQ G W+LF
Sbjct: 306 RKGAVCCYLEPWHLDFEEFLELRKNTGDERRRTHDMHTASWVPDLFMRRVQEGGTWTLFS 365
Query: 353 PNEASGLADCWGAEFEKLYTHYER---EGKAK--KVVQAQNLWFEILTSQIETGTPYMLF 407
PNE L + +G FE+ Y YER EGK + K V A+ LW ++L+ ETG P++ F
Sbjct: 366 PNEVPDLHELYGRAFERRYVEYERMAEEGKLRQHKRVDAKMLWRKMLSMLWETGHPWIAF 425
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD N +S Q ++G I SSNLCTEI+ TS ETAVCNL SI L +
Sbjct: 426 KDPSNIRSAQDHVGVIHSSNLCTEILLPTSREETAVCNLGSINLVEHL------------ 473
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
D KLAE L+ +ID+N+YP ARRSNLRHRPIG+G+ G
Sbjct: 474 --------SGDGLDEAKLAETVRTAVRMLDNVIDINFYPTPEARRSNLRHRPIGLGIMGF 525
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D + L + + SP+A + + E I +HA+ SSE+AA+ G Y +Y S S+G+L
Sbjct: 526 HDALLALRIPYASPQAVEFSDQTMELISWHAIMASSELAAERGRYPSYQGSKWSRGLLPI 585
Query: 588 DMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ +R DWG +R+ +++ GVRNS ++A PTA+ S I G ++
Sbjct: 586 DTIELLERERGGDLEMDRTARLDWGPVREAVARWGVRNSQIMAIAPTATISNIAGVSQSI 645
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP+ N++ + LSG+F +VN +L+ DL +G+WS + ++I Y DGS+ I EIP+E+K
Sbjct: 646 EPHYRNLFVKSNLSGDFTIVNPYLVEDLKRLGLWSQEMLDRIKYYDGSILPIEEIPDEVK 705
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
+Y T EI + L++ A R ++D QSLNI++ +P+ KK+ ++F W +GLKT Y
Sbjct: 706 HLYLTAHEIDPLWLIECASRRQKWVDMGQSLNIYVAEPSGKKLHEIYFAAWRKGLKT-TY 764
Query: 757 YLRSRAAADAIKFTVDTSVFKEKP 780
YLR+ A + K ++D + F +P
Sbjct: 765 YLRAVGATNVEKASMDINRFGVQP 788
>gi|302536806|ref|ZP_07289148.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. C]
gi|302445701|gb|EFL17517.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. C]
Length = 798
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 311/795 (39%), Positives = 449/795 (56%), Gaps = 57/795 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI---AVSN-LHKNT 90
DP V+ G ++L LA E AA + + P Y+ LAAR+ AV++
Sbjct: 40 DPGRVAAAALRGRSASADEAELRGLATEAAAGLISEDPAYSRLAARLLTLAVADEAAGQG 99
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIY----DRDFDYDYF 146
SF+E++ G + LIAD E + +AA LD+ + + D + +F
Sbjct: 100 ATSFAESVA---------VGHREGLIADRTAEFVAAHAARLDALVEHALAEGADDRFGFF 150
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + +V+E PQ+ ++RV+ G+ +DD ++ Y +MS+ +
Sbjct: 151 GLRTLHSRYLLRHPITRQVIETPQYFMLRVACGLAEDDSVQAVEEVASLYRLMSRLDYLP 210
Query: 201 ASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS
Sbjct: 211 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 270
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G+
Sbjct: 271 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 329
Query: 321 EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKA 380
++ R +L A W+PD FM RV + WSLF P + L D +G EF+ Y E G A
Sbjct: 330 DQRRTHNLNLAHWIPDEFMRRVNADADWSLFSPADVPELVDLYGDEFDAAYVKAEAAGLA 389
Query: 381 KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNL-GTI-KSSNLCTEIIEYTSP 438
KK + A++L+ ++ + +TG +M FKD NR +NQ L GT+ SSNLCTEIIE T+
Sbjct: 390 KKTMPARDLYGRMMRTLAQTGQGWMTFKDASNRTANQTALPGTVVHSSNLCTEIIEVTND 449
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
ETAVCNL S+ L FV + ++ D+ +L E L++
Sbjct: 450 GETAVCNLGSVNLGAFVADGEM--------------------DWARLDETVRTAVTFLDR 489
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
++D+N+YP E A RSN + RP+G+G GL D F L + F+S EA+ L+ I E I A
Sbjct: 490 VVDINFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKALSTKISERIMLAA 549
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP--SDRWDWGVLRDMISKNGVRNSL 616
+ S ++A + GP + + ++G+L PD + +RWD LR I+K G+RNSL
Sbjct: 550 YEASCDLAERSGPLPAWAETRTAQGVLHPDHYETERHWPERWD--ALRARIAKTGMRNSL 607
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W +
Sbjct: 608 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNGYLVEDLKQLGVWDAQTRE 667
Query: 677 KIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNF 736
+ GSVQ IP E++ +Y+T WEI Q L+DMA R Y+DQSQSLN+ ++ P
Sbjct: 668 ALRESSGSVQGFGWIPAEIRELYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTI 727
Query: 737 KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPEL--VVDDETKMA 794
K++S++ W +GLKT YYLRSR A + + +L +D E
Sbjct: 728 GKLSSMYAYAWKQGLKT-TYYLRSRPATKIARAASGAAAVPAAATPAQLPQALDAEA--- 783
Query: 795 QVVCSLTNREECMAC 809
+ CSL N E C AC
Sbjct: 784 -LACSLENPESCEAC 797
>gi|373448933|gb|AEY74312.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 383
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 250/383 (65%), Positives = 315/383 (82%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+T+H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
AE AA TT HPDYA LAARIAVSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHK 180
+I+ K L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRV++GIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY+TLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLA 360
LEPWH+DI FL+LKKN G EEHR RDLF ALW+PDLFM+RV+ +G+WSL C +E SGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCLDECSGLN 360
Query: 361 DCWGAEFEKLYTHYEREGKAKKV 383
+ WG EFE+LYT YERE + K +
Sbjct: 361 NVWGDEFERLYTQYEREKRYKTI 383
>gi|357401661|ref|YP_004913586.1| Ribonucleoside-diphosphate reductase large subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|386357724|ref|YP_006055970.1| ribonucleoside-diphosphate reductase large subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337768070|emb|CCB76783.1| Ribonucleoside-diphosphate reductase large subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365808232|gb|AEW96448.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 788
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/787 (39%), Positives = 441/787 (56%), Gaps = 49/787 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G + G ++L +LA E AA + + P Y+ LAAR+ + +
Sbjct: 38 DPGRVAAAALRGRHAGSDAAELRDLATEAAAGLISEDPQYSFLAARLLARAITEEAAGQQ 97
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKT 150
SFS +I +G + LIAD +A LD+ I D + YFG +T
Sbjct: 98 VTSFSSSIA---------TGHREGLIADATAAFTAAHAGRLDALIDPAGDDRFGYFGLRT 148
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVSIGIHKDDIDSAIKT----YHMMSQRWFTHASPT 204
L YLL+ V +VVE PQH L+RV+ G+ DD +A++ Y +MS+ + +SPT
Sbjct: 149 LYSRYLLRHPVTRQVVETPQHFLLRVACGLAADDSAAAVEEVASLYRLMSRLDYLPSSPT 208
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+ IR+ GS IRG
Sbjct: 209 LFNSGTRHPQMSSCYLLDSPLDELDSIYQRYHQVARLSKHAGGIGLPFSRIRSRGSLIRG 268
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG SNGIVP LR + + V+QGG +RKGA VYLE WHAD+ EFL L+ N G++ R
Sbjct: 269 TNGRSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADVEEFLELRDNTGEDARR 327
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVV 384
+L A W+PD FM RV+ + +WSLF P + L D WG EF+ Y E G+ K V
Sbjct: 328 THNLNLAHWIPDEFMRRVEADAEWSLFSPADVPELVDLWGEEFDAAYRAAEAAGRQIKRV 387
Query: 385 QAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETA 442
A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T ETA
Sbjct: 388 PARQLYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGSVVHSSNLCTEILEVTDDGETA 447
Query: 443 VCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDV 502
VCNL S+ L + + + D+EKL L++++D+
Sbjct: 448 VCNLGSVNLAAHL-------------------TADASVDWEKLDATVRTAVTFLDRVVDI 488
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTS 562
NYYP E A SN R RP+G+GV GL D F L + F+SPEA+ L+ I E + A + S
Sbjct: 489 NYYPTEQAAASNSRWRPVGLGVMGLQDVFFRLRLPFDSPEARALSTRIAERVMLAAYEQS 548
Query: 563 SEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMP 622
+A + GP+ + + ++G+L PD + P+ W LR+ IS+ G+RNSLL+A P
Sbjct: 549 CALAERHGPHPAWERTRAARGVLHPDHFPTEPAWPDRWTALRERISRTGLRNSLLLAIAP 608
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W + + +
Sbjct: 609 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNTYLVADLKKLGVWDARTREALREAN 668
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GSVQ + IP ++ +Y+T WE+ Q L+DMA DR Y+DQSQSLN+ M P K++S+
Sbjct: 669 GSVQDLGWIPAGVRALYRTAWELPQRALIDMAADRTPYLDQSQSLNLFMAAPTIGKLSSM 728
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTN 802
+ W +GLKT YYLRSR A + + P++ D E + CSL N
Sbjct: 729 YAYAWKKGLKT-TYYLRSRPATRIARAAGAATATAAVPQQ---APDAEA----IACSLEN 780
Query: 803 REECMAC 809
E C AC
Sbjct: 781 PESCEAC 787
>gi|149916692|ref|ZP_01905194.1| ribonucleoside-diphosphate reductase, alpha subunit [Plesiocystis
pacifica SIR-1]
gi|149822409|gb|EDM81798.1| ribonucleoside-diphosphate reductase, alpha subunit [Plesiocystis
pacifica SIR-1]
Length = 792
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 305/762 (40%), Positives = 434/762 (56%), Gaps = 41/762 (5%)
Query: 56 LDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGL 111
LDEL A TA PDY+ LAARI + + SF +++ ++ R GL
Sbjct: 63 LDELLARTAVGWIVEEPDYSKLAARILAGAIAREAASQGVTSFLNSVETLH-----RLGL 117
Query: 112 KAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQH 169
+AA L++ + + D ++YFG +T+ YL++ +V+E PQH
Sbjct: 118 GNA----RALNFARAHAATLEAALDREGDRRFEYFGLRTVFDRYLMRHPKTRRVLETPQH 173
Query: 170 MLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
MRV+ + D D A+ Y + S+ + +SPTLFNAGT R QLSSCFL+ D +
Sbjct: 174 FFMRVAAALAVDP-DEAVALYGLFSRLDYLPSSPTLFNAGTHREQLSSCFLLDSPADHLV 232
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
IYE + A +SK +GGIG++ H +R+ GS I TNG SNGIVP L+ + + V+QG
Sbjct: 233 DIYERYTDVAKLSKFSGGIGLAYHRVRSRGSLIGDTNGHSNGIVPWLKTLDASVAAVNQG 292
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G +RKGA VYLE WHAD+ EFL L+ N G E RA +L A W+PD FM RV + WS
Sbjct: 293 G-RRKGACCVYLETWHADLPEFLELRDNTGNEYARAHNLNLANWIPDEFMRRVAADEGWS 351
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
LF P D +G F + Y ER G A + A+ L+ ++ + +TG +M FKD
Sbjct: 352 LFDPKTVRHFPDLYGEAFTRAYVEAERAGLAVATLPARELYARMMRTLAQTGNGWMCFKD 411
Query: 410 TCNRKSNQQNLG--TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
CN NQ T+ SNLCTEI+E TSP ETAVCNL SI L +R D
Sbjct: 412 RCNSTCNQTARPGRTVHLSNLCTEIVEVTSPEETAVCNLGSINLGHHLRPID-------- 463
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
G + D+ KL + L+++ID+N+YP+ETA +SN R RP+G+G GL
Sbjct: 464 ---GGGTQADWEVDWAKLGRSVTLAVRALDRVIDLNFYPLETAAKSNARWRPVGLGTMGL 520
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D + LG+ F+SP A++L + + E +Y+HAL+TS ++A + GP+ + + + G LQ
Sbjct: 521 HDLLLRLGLDFDSPAARELARRVAEHVYFHALRTSCDLARQHGPHPAFPETRAADGQLQF 580
Query: 588 DMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
D+W V P + W LR ++ +G+RNSLLVA PTA+ + I G EC EP SN+ R
Sbjct: 581 DLWGVEPGEDLPWDTLRRDVASHGLRNSLLVAVAPTATIASIAGCYECIEPAVSNLVKRE 640
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
LSGEF+ VN++L+ +L +G+W ++ + D+GSVQ I +PE L+ ++T WE+
Sbjct: 641 TLSGEFIQVNRYLIDELRRLGLWDEAMRAALKRDNGSVQGIARVPEALRRRFRTAWELPM 700
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
L+DMA RG +IDQSQSLN+ ++ P+ ++++++F W GLKT YYLRSR A+
Sbjct: 701 RALIDMAAARGPFIDQSQSLNLFVESPDLTRLSAMYFYAWKAGLKT-TYYLRSRPASGIA 759
Query: 768 KFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
K TVD + K K E + CSL N E C AC
Sbjct: 760 KATVDPANAKPKQRSAE----------ALACSLENPEACEAC 791
>gi|444731994|gb|ELW72321.1| Ribonucleoside-diphosphate reductase large subunit [Tupaia
chinensis]
Length = 447
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 290/537 (54%), Positives = 357/537 (66%), Gaps = 91/537 (16%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
D ++++ KV G+Y GVT +LD LAAETAA +TT HPDYA LAARIAVSNLHK TKK F
Sbjct: 2 DFLVLTMKVIQGLYSGVTMVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKMF 61
Query: 95 SETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERS 154
S+ ++D+YN+ N +G + ++A +I++ N CL+S IIYDRDF Y+YFGFK LE+S
Sbjct: 62 SDVMEDLYNYINPHNGKHSSMVAKSTLDIVLANKDCLNSAIIYDRDFSYNYFGFKALEQS 121
Query: 155 YLLKVQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQ 214
YLLK+ GKV +RPQHMLMRVS+GIHK+DID+AI+TY+++S++WFTHASPTLFNAGT RP+
Sbjct: 122 YLLKISGKVADRPQHMLMRVSVGIHKEDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPE 181
Query: 215 LSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVP 274
LS+ FL+ MKDDSIEGIY+TLK+CA+ISKSAGGIGV+V IRATGSY+ GTNG SNG+VP
Sbjct: 182 LSTYFLLNMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYLAGTNGNSNGLVP 241
Query: 275 MLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWV 334
MLRV+++TARYVDQ
Sbjct: 242 MLRVYSNTARYVDQ---------------------------------------------- 255
Query: 335 PDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEIL 394
DLFM+ V+TN WSL CPNE GL + WG EFEKLY YE++G KVV+AQ L
Sbjct: 256 -DLFMKWVETNQDWSLMCPNECPGLDEVWGEEFEKLYEKYEKQGHIHKVVKAQQL----- 309
Query: 395 TSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRF 454
NQQNLG IK SNLCTEI+EYTS E AVCNLAS+AL +
Sbjct: 310 --------------------CNQQNLGAIKCSNLCTEIVEYTSKEEVAVCNLASLALNMY 349
Query: 455 VREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSN 514
V + +DF+KLAEVT ++ NLNKII+ NYYP+ A SN
Sbjct: 350 V-------------------TSEHTYDFKKLAEVTEVIVRNLNKIINRNYYPIPEAYVSN 390
Query: 515 LRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
RH PIGIGVQ LAD FIL+ FESPE Q LNK IF+TIYY AL+ S ++A + GP
Sbjct: 391 KRHHPIGIGVQVLADAFILMRYPFESPEVQLLNKQIFQTIYYGALEASCDLAKEYGP 447
>gi|154269831|ref|XP_001535822.1| hypothetical protein HCAG_09248 [Ajellomyces capsulatus NAm1]
gi|150409470|gb|EDN04916.1| hypothetical protein HCAG_09248 [Ajellomyces capsulatus NAm1]
Length = 524
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/437 (60%), Positives = 316/437 (72%), Gaps = 35/437 (8%)
Query: 341 RVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIET 400
RV+ NG+W+LFCPNEA GLAD +G EFE LY YE+EG+ KK V+AQ LW+ IL +Q ET
Sbjct: 1 RVEKNGEWTLFCPNEAPGLADVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTET 60
Query: 401 GTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDV 460
G P+ML+KD+CNRKSNQ+NLGTI+SSNLCTEIIEY SP E AVCNLASIALP FV
Sbjct: 61 GNPFMLYKDSCNRKSNQKNLGTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD---- 116
Query: 461 PVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
P+ RG +DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI
Sbjct: 117 PI----------RGE----YDFGKLHEVTQVVVRNLNKIIDRNYYPVEEAKRSNFRHRPI 162
Query: 521 GIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPV 580
GVQGLAD F+ L + F+SPEA+QLN IFETIY+ L S E+A +GPY TY SPV
Sbjct: 163 ACGVQGLADAFLALRLPFDSPEAKQLNIQIFETIYHAGLTASCELAKVDGPYSTYEGSPV 222
Query: 581 SKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
S+GILQ DMWNV P+D WDW L+ I+K+G ILG NECFEPYT
Sbjct: 223 SQGILQYDMWNVTPTDLWDWDSLKQDIAKHG-----------------ILGFNECFEPYT 265
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYK 700
SNIYSRRVL+GEF +VN LL DL +MG+WS +KN+II + GS+Q IP IP+++K +YK
Sbjct: 266 SNIYSRRVLAGEFQIVNPWLLKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPQDIKALYK 325
Query: 701 TVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRS 760
TVWEI Q T+V MA DRG +IDQSQSLNIH+ +P K+TS+HF W GLKTGMYYLR+
Sbjct: 326 TVWEISQRTIVQMAADRGAFIDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRT 385
Query: 761 RAAADAIKFTVDTSVFK 777
AA+ I+FTVD K
Sbjct: 386 MAASAPIQFTVDQEQLK 402
>gi|345009209|ref|YP_004811563.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
violaceusniger Tu 4113]
gi|344035558|gb|AEM81283.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
violaceusniger Tu 4113]
Length = 804
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 311/822 (37%), Positives = 453/822 (55%), Gaps = 43/822 (5%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTE--HCDPVLVSQKVCAGVYKGVTTSQLDELAA 61
V +A H TA L+ L+ GL+ + DP V+ G + G ++L LA
Sbjct: 9 VSEQAVSQAAHDAPGTALLRTLT-GLTADLPATDPGKVAAAALRGRHPGSDEAELRGLAI 67
Query: 62 ETAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIA 117
E AA + P+Y+ LAAR+ + + SFS +++ R GL A A
Sbjct: 68 EAAAGLIAEEPEYSRLAARLLALTITEEAAGQGAVSFSTSVQ-----VGHREGLLADSTA 122
Query: 118 DDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVS 175
+ + A ++ + D + YFG +TL YLL+ + +V+E PQH L+RV+
Sbjct: 123 EFAAAHAARLDALVERALADGADKRFGYFGLRTLYSRYLLRHPITRQVIETPQHFLLRVA 182
Query: 176 IGIHKD----DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGI 231
G+ +D +D + Y + S + +SPTLFN+GT PQ+SSC+L+ D ++ I
Sbjct: 183 CGLAEDLSERALDDVAELYRLTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSI 242
Query: 232 YETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGG 291
Y + A +SK AGGIG+S IRA GS IRGTNG SNGIVP LR + + V+QGG
Sbjct: 243 YNRYHQVARLSKHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG- 301
Query: 292 KRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLF 351
+RKGA VYLE WHAD+ EFL L+ N G+E R +L A W+PD FM RV+ + WSLF
Sbjct: 302 RRKGAACVYLETWHADLEEFLELRDNTGEEARRTHNLNIAHWIPDEFMRRVEADADWSLF 361
Query: 352 CPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTC 411
P +A L D WG EF+ Y E EG+A K V A+ L+ ++ + +TG +M FKD
Sbjct: 362 SPVDAPALVDLWGDEFDAAYRKAEAEGRAVKQVPARQLYARMMRTLAQTGNGWMTFKDAA 421
Query: 412 NRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
NR +NQ + + SSNLCTEI+E T+ ETAVCNL S+ L + E
Sbjct: 422 NRTANQTAEPGRVVHSSNLCTEILEVTNDGETAVCNLGSVNLAAHLDE------------ 469
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
+ D+E+L L++++D+N+YP + A SN R RP+G+G+ GL D
Sbjct: 470 -------DGQVDWERLDATVHTAVTFLDRVVDINFYPTDEAGASNSRWRPVGLGLMGLQD 522
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
F L + F+SPEA+ L+ I E I A + S E+A + GP+ + + ++G+L PD
Sbjct: 523 VFFRLRLPFDSPEAKALSTRISERIMLAAYEASCELAERHGPHPAWSETRTARGVLHPDH 582
Query: 590 W-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+ + + + W LR ++K+G+RNSLL+A PTA+ + I G EC EP SN++ R
Sbjct: 583 YTDAVATWPERWEALRTRMAKSGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRET 642
Query: 649 LSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQM 708
LSGEF+ VN +L+ DL ++G+W + + +GSVQ+ +P +++ +Y+T WEI Q
Sbjct: 643 LSGEFLQVNSYLVDDLKKLGVWDAHTREALRESNGSVQEFSWVPADVRDLYRTAWEIPQR 702
Query: 709 TLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIK 768
L++MA R Y+DQSQSLN+ M P K++S++ W RG+KT YYLRSR A +
Sbjct: 703 ALIEMAAARTPYLDQSQSLNLFMASPTIGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQ 761
Query: 769 FTVDTSVFKEKPEKPELVVDDETKMAQ-VVCSLTNREECMAC 809
P + V A + CSL N E C AC
Sbjct: 762 SARGGGAAATAPAPALIPVQQAPAEADAIACSLENPESCEAC 803
>gi|386839867|ref|YP_006244925.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374100168|gb|AEY89052.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451793161|gb|AGF63210.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 698
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 286/712 (40%), Positives = 412/712 (57%), Gaps = 42/712 (5%)
Query: 110 GLKAPLIADDIYEIIMKNAACLD----SEIIYDRDFDYDYFGFKTLERSYLLK--VQGKV 163
G + LIAD E + +A LD S + D + YFG +TL YLL+ V KV
Sbjct: 16 GRREGLIADGTAEFVRTHAERLDALVESAVAEGADDRFGYFGLRTLYSRYLLRHPVTRKV 75
Query: 164 VERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCF 219
+E PQH L+RV+ G+ +DD +D Y +MS+ + +SPTLFN+GTP PQ+S+C+
Sbjct: 76 IETPQHFLLRVASGLAEDDTSRSVDEVAALYGLMSRLDYLPSSPTLFNSGTPHPQMSACY 135
Query: 220 LVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVF 279
L+ D ++ IY+ + A +SK AGGIG+S IR+ GS IRGTNG SNGIVP L+
Sbjct: 136 LLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIRGTNGHSNGIVPFLKTL 195
Query: 280 NDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFM 339
+ + V+QGG +RKGA AVYLE WH+DI EFL L+ N G++ R +L A W+PD FM
Sbjct: 196 DASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHNLNLAHWIPDEFM 254
Query: 340 ERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIE 399
RV + QWSLF P + L D WG +F+ Y E G AKK + A++L+ ++ + +
Sbjct: 255 RRVNADEQWSLFSPADVPELVDLWGEDFDAAYRKAEAAGLAKKTIAARDLYGRMMRTLAQ 314
Query: 400 TGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVRE 457
TG +M FKD NR +NQ + + SSNLCTEI+E T+ ETAVCNL S+ L FV
Sbjct: 315 TGNGWMTFKDAANRTANQTAEPGNVVHSSNLCTEILEVTNDGETAVCNLGSVNLGAFVDA 374
Query: 458 KDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
+ D+E+L + L++++D+N+YP E A RSN +
Sbjct: 375 ASGDI------------------DWERLDQTVRTAVTFLDRVVDINFYPTEQAGRSNAKW 416
Query: 518 RPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHN 577
RP+G+G GL D F L + F+S EA+ L+ I E I A +TS+++A + GP +
Sbjct: 417 RPVGLGAMGLQDVFFKLRLPFDSAEAKALSTRIAERIMLAAYETSADLAERNGPLPAWDQ 476
Query: 578 SPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
+ ++G+L PD ++V + W LR+ ++ G+RN+L++A PT++ + I G EC E
Sbjct: 477 TRAARGVLHPDHYDVQFTWPERWAALRERVAAVGMRNALMLAIAPTSTIASIAGVYECIE 536
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P SN++ R LSGEF+ VN +L+ DL +G+W + + +GS+Q P IPEE +
Sbjct: 537 PQVSNLFKRETLSGEFLQVNSYLVQDLKNLGVWDARTREALRDSNGSIQDFPWIPEETRA 596
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
+Y+T WEI Q L+DMA R Y+DQ QSLN+ M+ P K++S++ W GLKT YY
Sbjct: 597 LYRTAWEIPQRGLIDMAAARTPYLDQGQSLNLFMETPTIGKLSSMYAYAWKSGLKT-TYY 655
Query: 758 LRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
LRSR A + T ++ P+ + CSL N E C AC
Sbjct: 656 LRSRPATRIARAAQATVPAQQPAPDPD----------AIACSLENPESCEAC 697
>gi|365866749|ref|ZP_09406353.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces sp. W007]
gi|364003828|gb|EHM24964.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces sp. W007]
Length = 773
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 302/793 (38%), Positives = 441/793 (55%), Gaps = 54/793 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR+ +
Sbjct: 16 DPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIADEAAGQG 75
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLD---SEIIYD-RDFDYDYF 146
SFS ++ G + LIAD + ++A LD + + D D + YF
Sbjct: 76 ATSFSASVA---------VGHREGLIADRTAAFVALHSAALDRLVEQALADGADDRFGYF 126
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D+ +D Y +MS+ +
Sbjct: 127 GLRTLHSRYLLRHPLTRQVIETPQHFMLRVAAGLAEDESARALDEVAALYGLMSRLDYLP 186
Query: 201 ASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS
Sbjct: 187 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 246
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G+
Sbjct: 247 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 305
Query: 321 EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKA 380
++ R +L A W+PD FM RV + +WSLF P + L D WG F+ Y E +G A
Sbjct: 306 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDAFDAAYRAAEAKGLA 365
Query: 381 KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSP 438
++ + A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T
Sbjct: 366 RRTIPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTDD 425
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
ETAVCNL S+ L FV + + D+++L L++
Sbjct: 426 GETAVCNLGSVNLGAFVADGSI--------------------DWDRLDATVRTAVTFLDR 465
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
++D+N+YP E A RSN R RP+G+G GL D F L + F+SPEA+ L+ I E I A
Sbjct: 466 VVDINFYPTEQAGRSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTRISERIMLAA 525
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS--DRWDWGVLRDMISKNGVRNSL 616
+ S ++A + GP + + ++G+L PD + + +RWD LR I+K G+RNSL
Sbjct: 526 YEASCDLAERSGPLPAWSETRAARGVLHPDHYATELNWPERWD--ALRARIAKTGMRNSL 583
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W +
Sbjct: 584 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKQLGVWDARTRE 643
Query: 677 KIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNF 736
+ GSVQ IPE+++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P
Sbjct: 644 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 703
Query: 737 KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQV 796
K++S++ W +GLKT YYLRSR A + + + D +A
Sbjct: 704 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPIPVQQASAPDADAIA-- 760
Query: 797 VCSLTNREECMAC 809
CSL N E C AC
Sbjct: 761 -CSLENPESCEAC 772
>gi|326776717|ref|ZP_08235982.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseus XylebKG-1]
gi|326657050|gb|EGE41896.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseus XylebKG-1]
Length = 804
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 303/793 (38%), Positives = 438/793 (55%), Gaps = 54/793 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR+ +
Sbjct: 47 DPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIADEAAGQG 106
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLD---SEIIYD-RDFDYDYF 146
SFS ++ G + LIAD + +A LD + + D D + YF
Sbjct: 107 ATSFSASVA---------VGHREGLIADRTAAFVALHATALDQLVGQALTDGADDRFGYF 157
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D+ +D Y +MS+ +
Sbjct: 158 GLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESVRALDEVAALYGLMSKLDYLP 217
Query: 201 ASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS
Sbjct: 218 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 277
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G+
Sbjct: 278 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 336
Query: 321 EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKA 380
++ R +L A W+PD FM RV + +WSLF P + L D WG F+ Y E +G A
Sbjct: 337 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDAFDAAYRAAEAKGLA 396
Query: 381 KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSP 438
+K + A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T
Sbjct: 397 RKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTDD 456
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
ETAVCNL S+ L FV N D+++L L++
Sbjct: 457 GETAVCNLGSVNLGAFV--------------------ANGSIDWDRLDATVRTAVTFLDR 496
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
++D+N+YP E A SN R RP+G+G GL D F L + F+SPEA+ L+ I E I A
Sbjct: 497 VVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTKISERIMLAA 556
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS--DRWDWGVLRDMISKNGVRNSL 616
+ S ++A + GP + + ++G+L PD + + DRWD LR ++K G+RNSL
Sbjct: 557 YEASCDLAERSGPLPAWSRTRAARGVLHPDHYATELNWPDRWD--ALRARVAKTGMRNSL 614
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W +
Sbjct: 615 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKKLGVWDARTRE 674
Query: 677 KIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNF 736
+ GSVQ IPE+++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P
Sbjct: 675 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 734
Query: 737 KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQV 796
K++S++ W +GLKT YYLRSR A + + + D +A
Sbjct: 735 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPLPVQQASAPDADAIA-- 791
Query: 797 VCSLTNREECMAC 809
CSL N E C AC
Sbjct: 792 -CSLENPESCEAC 803
>gi|182436092|ref|YP_001823811.1| ribonucleoside-diphosphate reductase large subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178464608|dbj|BAG19128.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 804
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 303/793 (38%), Positives = 438/793 (55%), Gaps = 54/793 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR+ +
Sbjct: 47 DPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIADEAAGQG 106
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLD---SEIIYD-RDFDYDYF 146
SFS ++ G + LIAD + +A LD + + D D + YF
Sbjct: 107 ATSFSASVA---------VGHREGLIADRTAAFVALHATALDQLVGQALTDGADDRFGYF 157
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D+ +D Y +MS+ +
Sbjct: 158 GLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESVRALDEVAALYGLMSKLDYLP 217
Query: 201 ASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS
Sbjct: 218 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 277
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G+
Sbjct: 278 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 336
Query: 321 EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKA 380
++ R +L A W+PD FM RV + +WSLF P + L D WG F+ Y E +G A
Sbjct: 337 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDAFDAAYRAAEAKGLA 396
Query: 381 KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSP 438
+K + A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T
Sbjct: 397 RKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTDD 456
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
ETAVCNL S+ L FV N D+++L L++
Sbjct: 457 GETAVCNLGSVNLGAFV--------------------ANGSIDWDRLDSTVRTAVTFLDR 496
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
++D+N+YP E A SN R RP+G+G GL D F L + F+SPEA+ L+ I E I A
Sbjct: 497 VVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTKISERIMLAA 556
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS--DRWDWGVLRDMISKNGVRNSL 616
+ S ++A + GP + + ++G+L PD + + DRWD LR ++K G+RNSL
Sbjct: 557 YEASCDLAERSGPLPAWSKTRAARGVLHPDHYATELNWPDRWD--ALRARVAKTGMRNSL 614
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W +
Sbjct: 615 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKKLGVWDARTRE 674
Query: 677 KIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNF 736
+ GSVQ IPE+++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P
Sbjct: 675 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 734
Query: 737 KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQV 796
K++S++ W +GLKT YYLRSR A + + + D +A
Sbjct: 735 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPLPVQQASAPDADAIA-- 791
Query: 797 VCSLTNREECMAC 809
CSL N E C AC
Sbjct: 792 -CSLENPESCEAC 803
>gi|239990629|ref|ZP_04711293.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces roseosporus NRRL 11379]
gi|291447644|ref|ZP_06587034.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
roseosporus NRRL 15998]
gi|291350591|gb|EFE77495.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
roseosporus NRRL 15998]
Length = 807
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 301/793 (37%), Positives = 439/793 (55%), Gaps = 54/793 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR+ ++
Sbjct: 50 DPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTLSIADEAAGQG 109
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDS----EIIYDRDFDYDYF 146
SFS ++ G + LIAD + +A LD + D + YF
Sbjct: 110 ATSFSASVA---------VGHREGLIADRTAAFVELHAKALDELVERTLAEGADDRFGYF 160
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D+ +D Y +MS+ +
Sbjct: 161 GLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESVRALDEVAALYGLMSKLDYLP 220
Query: 201 ASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS
Sbjct: 221 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 280
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G+
Sbjct: 281 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 339
Query: 321 EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKA 380
++ R +L A W+PD FM RV + +WSLF P + L D WG F+ Y E +G A
Sbjct: 340 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDAFDAAYRAAEAKGLA 399
Query: 381 KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSP 438
+K + A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T+
Sbjct: 400 RKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTND 459
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
ETAVCNL S+ L FV N D+++L L++
Sbjct: 460 GETAVCNLGSVNLGAFV--------------------ANGSIDWDRLDSTVRTAVTFLDR 499
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
++D+N+YP E A SN R RP+G+G GL D F L + F+SPEA+ L+ I E I A
Sbjct: 500 VVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTKISERIMLAA 559
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS--DRWDWGVLRDMISKNGVRNSL 616
+ S ++A + GP + + ++G+L PD ++ + +RWD LR ++K G+RNSL
Sbjct: 560 YEASCDLAERSGPLPAWSETRAARGVLHPDHYDTELNWPERWD--ALRARVAKTGMRNSL 617
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W +
Sbjct: 618 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKKLGVWDARTRE 677
Query: 677 KIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNF 736
+ GSVQ IPE+++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P
Sbjct: 678 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 737
Query: 737 KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQV 796
K++S++ W +GLKT YYLRSR A + + + D +A
Sbjct: 738 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPIPVQQASAPDADAIA-- 794
Query: 797 VCSLTNREECMAC 809
CSL N E C AC
Sbjct: 795 -CSLENPESCEAC 806
>gi|411004497|ref|ZP_11380826.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
globisporus C-1027]
Length = 807
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 302/793 (38%), Positives = 439/793 (55%), Gaps = 54/793 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR+ ++
Sbjct: 50 DPGRVAAAALRGRNARSDEAELRMLATEAAAGLISEDPAYSRLAARLLTLSIADEAAGQG 109
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDS----EIIYDRDFDYDYF 146
SFS ++ G + LIAD + +A LD + D + YF
Sbjct: 110 ATSFSASVT---------VGHREGLIADRTAAFVELHAKALDELVERTLAEGADDRFGYF 160
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVSIGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D+ +D Y +MS+ +
Sbjct: 161 GLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESARALDEVAALYGLMSKLDYLP 220
Query: 201 ASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT PQ+SSC+L+ D ++ IY+ + A +SK AGGIG+S IRA GS
Sbjct: 221 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 280
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL L+ N G+
Sbjct: 281 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 339
Query: 321 EEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKA 380
++ R +L A W+PD FM RV + +WSLF P + L D WG EF+ Y E +G A
Sbjct: 340 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDEFDAAYRAAEAKGLA 399
Query: 381 KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQ--QNLGTIKSSNLCTEIIEYTSP 438
+K + A+ L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E T+
Sbjct: 400 RKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTND 459
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
ETAVCNL S+ L FV N D+++L L++
Sbjct: 460 GETAVCNLGSVNLGAFV--------------------ANGSIDWDRLDSTVRTAVTFLDR 499
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
++D+N+YP E A SN R RP+G+G GL D F L + F+SPEA+ L+ I E I A
Sbjct: 500 VVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTKISERIMLAA 559
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPS--DRWDWGVLRDMISKNGVRNSL 616
+ S ++A + GP + + ++G+L PD + + +RWD LR ++K G+RNSL
Sbjct: 560 YEASCDLAERSGPLPAWSETRAARGVLHPDHYATELNWPERWD--ALRARVAKTGMRNSL 617
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W +
Sbjct: 618 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKKLGVWDARTRE 677
Query: 677 KIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNF 736
+ GSVQ IPE+++ +Y+T WEI Q L+DMA R ++DQSQSLN+ ++ P
Sbjct: 678 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 737
Query: 737 KKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQV 796
K++S++ W +GLKT YYLRSR A + + + D +A
Sbjct: 738 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPIPVQQASAPDADAIA-- 794
Query: 797 VCSLTNREECMAC 809
CSL N E C AC
Sbjct: 795 -CSLENPESCEAC 806
>gi|340783272|ref|YP_004749879.1| ribonucleotide reductase of class Ia (aerobic) subunit alpha
[Acidithiobacillus caldus SM-1]
gi|340557423|gb|AEK59177.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Acidithiobacillus caldus SM-1]
Length = 945
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 316/804 (39%), Positives = 447/804 (55%), Gaps = 47/804 (5%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAA 65
DG ++ + +++ + + GL D +L Q +Y G++ ++L +
Sbjct: 142 DGSEQPLDLERLRQVIGEACSGLGEAVSVDAIL--QATQRNLYDGISEAELFQAPILACR 199
Query: 66 AMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNE------RSGLKAPLIADD 119
+ P YA AR+ + + + T +M Y E R+G++ L+
Sbjct: 200 VLIEQDPAYAHATARLLLDRVRREVLGE-PATHAEMAQRYPEYFKDYLRTGIQHELLDPR 258
Query: 120 IYEIIM-KNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI 178
+ + + + AA L E RD D+ Y G + L Y L V+ + +E PQ MRV++G+
Sbjct: 259 LAQFDLDRIAAALRPE----RDLDFQYLGLQILYDRYFLHVRERRIELPQAFWMRVAMGL 314
Query: 179 HKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
++ID AI Y ++S+ F ++PTLFNAGT RPQLSSCFL + DD ++GIYE +
Sbjct: 315 ALEEIDREEQAIAFYEVLSRFEFVSSTPTLFNAGTLRPQLSSCFLTTVADD-LDGIYEAI 373
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+ A++SK +GG+G +RA GSYI+GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 374 KDNALLSKYSGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 432
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
A YLE WH DI EFL L+KN G + R D+ A W+PDLFMERV+ NGQW+LF PNE
Sbjct: 433 AVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMERVEANGQWTLFSPNE 492
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIETGTPYMLFKDT 410
+ L D G F++ Y HYER A ++ + A LW ++LT ETG P++ FKD
Sbjct: 493 VADLHDLTGQAFKERYEHYERLADAGEITLFKRLPALQLWRKMLTMLFETGHPWITFKDP 552
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L +R P + +
Sbjct: 553 CNLRSPQQHVGVVHSSNLCTEITLNTSDKEIAVCNLGSVNLVAHLRA------GLPGQGL 606
Query: 471 GSRGSKNRFF---DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
+ S + D +KLA + L+ +ID+NYY V AR SNLRHRP+G+G+ G
Sbjct: 607 RTEASADELLALVDTDKLARTVRVAMRMLDNVIDMNYYAVAKARNSNLRHRPVGLGLMGF 666
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
+D + L + + S A + E I YHA+ S+++A + G Y ++ S S+GIL
Sbjct: 667 SDALLALRIPYASQAAVEFADISQELISYHAIDASADLARERGSYRSFPGSLWSQGILPL 726
Query: 588 DMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ S R DW LR + K G+RNS +A PTA+ S I+G ++
Sbjct: 727 DSIELLARSRVAGVDVDRSQRLDWESLRTKV-KGGMRNSNCLAIAPTATISNIVGVSQGI 785
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF VVN +L+ DL +W + N + Y DGSV I IPE LK
Sbjct: 786 EPIYQNLYVKSNLSGEFTVVNAYLVRDLKAADLWDEVMVNDLKYFDGSVVPIDRIPEALK 845
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
+Y +EI LV+ A R ++DQSQSLN++ QP+ KK+ + W RGLKT Y
Sbjct: 846 PLYANAFEIDPQWLVEAAARRQKWLDQSQSLNLYFGQPSGKKIDETYRLAWRRGLKT-TY 904
Query: 757 YLRSRAAADAIKFTVDTSVFKEKP 780
YLRS A A K TV V P
Sbjct: 905 YLRSLGATAAEKSTVSKGVLNAVP 928
>gi|149927166|ref|ZP_01915423.1| ribonucleotide-diphosphate reductase alpha subunit [Limnobacter sp.
MED105]
gi|149824105|gb|EDM83326.1| ribonucleotide-diphosphate reductase alpha subunit [Limnobacter sp.
MED105]
Length = 969
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/835 (37%), Positives = 459/835 (54%), Gaps = 64/835 (7%)
Query: 16 DKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYA 75
+ + A ++ + GL+ D + ++ +Y GV ++ + A + AM N P Y
Sbjct: 157 EALKALIESAAVGLN--EIDVAHLQKETLKNLYDGVKIDEVFKSAILASRAMIENEPSYT 214
Query: 76 SLAARIAVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAPLIADDIYEIIMKNAAC 130
+ +R+ + + + ++ + + +Y Y + G+ A L+ + + + MK
Sbjct: 215 LVTSRLLLHTIRREIIGREIAQDEMAQVYPEYFPQFIKKGIAAGLLDNRLAQFDMKK--- 271
Query: 131 LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AI 187
L + + Y+RD +DY G +TL Y L V+G +E PQ MRV++G+ +++D AI
Sbjct: 272 LGAALKYERDLQFDYLGLQTLYDRYFLHVEGTRIEMPQAFYMRVAMGLALNEVDREARAI 331
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGG 247
+ Y ++S F ++PTLFN+GT R QLSSC+L + DD ++ IYE +KE A++SK AGG
Sbjct: 332 EFYEVLSTFDFMSSTPTLFNSGTIRSQLSSCYLTTIGDD-LDDIYEGIKENALLSKFAGG 390
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH D
Sbjct: 391 LGNDWTPVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHMD 449
Query: 308 IFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEF 367
I EFL L+KN G + R D+ A W+PDLFM+RV G W+LF P++ L D +G F
Sbjct: 450 IEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGNWTLFSPSDCPDLHDLYGKAF 509
Query: 368 EKLYTHYEREG-----KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGT 422
EK Y YE + K K V+A LW +IL+ ETG P++ FKD CN +S QQ++G
Sbjct: 510 EKAYVGYEEKAARGDLKLFKTVEAAKLWRKILSMLFETGHPWITFKDPCNIRSPQQHVGV 569
Query: 423 IKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDF 482
+ SSNLCTEI T+ E AVCNL S+ L R ++ D + D
Sbjct: 570 VHSSNLCTEITLNTNENEIAVCNLGSVNLTRHLKPAD---------------NGELVLDH 614
Query: 483 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPE 542
EKL + + L+ +ID+NYY V AR SNLRHRP+G+G+ G D ++ + S +
Sbjct: 615 EKLQKTVGVAMRMLDNVIDINYYAVAKARNSNLRHRPVGMGMMGFQDALHMMRKPYASRD 674
Query: 543 AQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-------- 594
A + + E I Y+A + S+E+AA+ G Y T+ S KGI+ D ++
Sbjct: 675 AVEFADESMEAICYYAYEASTELAAERGAYSTFKGSLWDKGIMPLDSLKLLEEERGGYVE 734
Query: 595 ---SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
S R DW LR I K+G+RNS VA PTA+ S I+G EP N+Y + LSG
Sbjct: 735 VDTSSRMDWDALRARIKKHGMRNSNCVAIAPTATISNIIGVAASIEPTFQNLYVKSNLSG 794
Query: 652 EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLV 711
EF +VN+HL+ DL +GIW + + + Y DGSV KI IPE+LK +Y T +E+ LV
Sbjct: 795 EFTIVNEHLVRDLKRLGIWDEVMISDLKYFDGSVMKIDRIPEDLKRLYATAFEMDPRWLV 854
Query: 712 DMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
+ A R +IDQ QSLNI+M + K++ + W RGLKT YYLR+ A A K T+
Sbjct: 855 EAAARRQKWIDQGQSLNIYMAGVSGKRLDDTYKLAWIRGLKT-TYYLRTIGATHAEKSTL 913
Query: 772 -------------DTSVFKEKPEKPELVVDDETKMAQVVCSL----TNREECMAC 809
++ F P + E ++ VC++ +EC AC
Sbjct: 914 AGGELNSVNAEGGASAAFTSAPATGLVPNLPEQEIEGKVCTMRPGDAGFDECEAC 968
>gi|345001979|ref|YP_004804833.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
sp. SirexAA-E]
gi|344317605|gb|AEN12293.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SirexAA-E]
Length = 803
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 311/818 (38%), Positives = 448/818 (54%), Gaps = 56/818 (6%)
Query: 11 EAVHFDKITARLKKLS-YGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTT 69
EA + TA L+ L+ + DP V+ G ++L LA E AA + +
Sbjct: 22 EATNDGPGTALLRTLTDLTVDLPDTDPGRVAAAALRGRNARSDEAELRSLATEAAAGLIS 81
Query: 70 NHPDYASLAARIAVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDIYEIIM 125
P Y+ LAAR+ + SFS ++ G + LIAD +
Sbjct: 82 EDPAYSRLAARLLTLTIADEAAGQGATSFSASVA---------VGHREGLIADRTAAFVE 132
Query: 126 KNAACLDS----EIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRVSIGIH 179
++A LD+ + D + YFG +TL YLL+ +V+E PQH ++RV+ G+
Sbjct: 133 QHAQVLDALVERTLADGADDRFGYFGLRTLHSRYLLRHPHTRQVIETPQHFMLRVAAGLA 192
Query: 180 KDDI----DSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
+D+ D Y +MS+ + +SPTLFN+GT PQ+SSC+L+ D ++ IY+
Sbjct: 193 EDESVRARDEVAALYGLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRY 252
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
+ A +SK AGGIG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKG
Sbjct: 253 HQVARLSKHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKG 311
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
A AVYLE WHADI EFL L+ N G+++ R +L A W+PD FM RV + +WSLF P +
Sbjct: 312 AAAVYLETWHADIEEFLELRDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPAD 371
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKS 415
L D WG F+ Y E G A+K + A+ L+ ++ + +TG +M FKD NR +
Sbjct: 372 VPELTDLWGDAFDAAYRAAEARGLARKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTA 431
Query: 416 NQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSR 473
NQ + + SSNLCTEI+E T ETAVCNL S+ L FV S
Sbjct: 432 NQTAEPGRVVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFV----------------SG 475
Query: 474 GSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
GS D+E+L L++++D+N+YP E A SN R RP+G+G GL D F
Sbjct: 476 GS----IDWERLDATVRTAVTFLDRVVDINFYPTEQAGTSNARWRPVGLGAMGLQDVFFQ 531
Query: 534 LGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVI 593
L + F+SPEA+ L+ I E I A + S ++A + GP + + ++G+L PD +
Sbjct: 532 LRLPFDSPEARALSTRISERIMLAAYEASCDLAERSGPLPAWSETRAARGVLHPDHYATE 591
Query: 594 PS--DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
+ +RWD LR I+K G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 592 LNWPERWD--ALRARIAKTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSG 649
Query: 652 EFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLV 711
EF+ VN +L+ +L ++G+W + + GSVQ IPE+++ +Y+T WEI Q L+
Sbjct: 650 EFLQVNGYLVEELKKLGVWDARTREALREASGSVQGFGWIPEDVRALYRTAWEIPQRGLI 709
Query: 712 DMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
DMA R ++DQSQSLN+ ++ P K++S++ W +GLKT YYLRSR A +
Sbjct: 710 DMAAARTPFLDQSQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAS 768
Query: 772 DTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ P + D + + CSL N E C AC
Sbjct: 769 GRTASAALPAQQAQAPDADA----IACSLENPESCEAC 802
>gi|255019899|ref|ZP_05291974.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Acidithiobacillus caldus ATCC 51756]
gi|254970679|gb|EET28166.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Acidithiobacillus caldus ATCC 51756]
Length = 945
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 316/804 (39%), Positives = 446/804 (55%), Gaps = 47/804 (5%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAA 65
DG ++ + +++ + + GL D +L Q +Y G++ +L +
Sbjct: 142 DGSEQPLDLERLRQVIGEACSGLGEAVSVDAIL--QATQRNLYDGISEEELFQAPILACR 199
Query: 66 AMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNE------RSGLKAPLIADD 119
+ P YA AR+ + + + T +M Y E R+G++ L+
Sbjct: 200 VLIEQDPAYAHATARLLLDRVRREVLGE-PATHAEMAQRYPEYFKDYLRTGIQHELLDPR 258
Query: 120 IYEIIM-KNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI 178
+ + + + AA L E RD D+ Y G + L Y L V+ + +E PQ MRV++G+
Sbjct: 259 LAQFDLDRIAAALRPE----RDLDFQYLGLQILYDRYFLHVRERRIELPQAFWMRVAMGL 314
Query: 179 HKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
++ID AI Y ++S+ F ++PTLFNAGT RPQLSSCFL + DD ++GIYE +
Sbjct: 315 ALEEIDREEQAIAFYEVLSRFEFVSSTPTLFNAGTLRPQLSSCFLTTVADD-LDGIYEAI 373
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+ A++SK +GG+G +RA GSYI+GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 374 KDNALLSKYSGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 432
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
A YLE WH DI EFL L+KN G + R D+ A W+PDLFMERV+ NGQW+LF PNE
Sbjct: 433 AVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMERVEANGQWTLFSPNE 492
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIETGTPYMLFKDT 410
+ L D G F++ Y HYER A ++ + A LW ++LT ETG P++ FKD
Sbjct: 493 VADLHDLTGQAFKERYEHYERLADAGEITLFKRLPALQLWRKMLTMLFETGHPWITFKDP 552
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L +R P + +
Sbjct: 553 CNLRSPQQHVGVVHSSNLCTEITLNTSDKEIAVCNLGSVNLVAHLRA------GLPGQGL 606
Query: 471 GSRGSKNRFF---DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
+ S + D +KLA + L+ +ID+NYY V AR SNLRHRP+G+G+ G
Sbjct: 607 RTEASADELLALVDTDKLARTVRVAMRMLDNVIDMNYYAVAKARNSNLRHRPVGLGLMGF 666
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
+D + L + + S A + E I YHA+ S+++A + G Y ++ S S+GIL
Sbjct: 667 SDALLALRIPYASQAAVEFADISQELISYHAIDASADLARERGSYRSFPGSLWSQGILPL 726
Query: 588 DMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ S R DW LR + K G+RNS +A PTA+ S I+G ++
Sbjct: 727 DSIELLARSRVAGVDVDRSQRLDWESLRTKV-KGGMRNSNCLAIAPTATISNIVGVSQGI 785
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF VVN +L+ DL +W + N + Y DGSV I IPE LK
Sbjct: 786 EPIYQNLYVKSNLSGEFTVVNAYLVRDLKAADLWDEVMVNDLKYFDGSVVPIDRIPEALK 845
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
+Y +EI LV+ A R ++DQSQSLN++ QP+ KK+ + W RGLKT Y
Sbjct: 846 PLYANAFEIDPQWLVEAAARRQKWLDQSQSLNLYFGQPSGKKIDETYRLAWRRGLKT-TY 904
Query: 757 YLRSRAAADAIKFTVDTSVFKEKP 780
YLRS A A K TV V P
Sbjct: 905 YLRSLGATAAEKSTVSKGVLNAVP 928
>gi|271967541|ref|YP_003341737.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
gi|270510716|gb|ACZ88994.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
Length = 731
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 311/759 (40%), Positives = 436/759 (57%), Gaps = 57/759 (7%)
Query: 59 LAAETAAAMTTNHPD----YASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAP 114
LA E AAA P+ A L A + + ++FSE++ + A
Sbjct: 21 LAIEEAAARVITDPENSRIAAGLLAELIADEAAGHGVRAFSESVAATH---------AAG 71
Query: 115 LIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLM 172
L+ D + + +AA LD+ + D D ++YFG +T+ YLL+ +V+ERPQH +
Sbjct: 72 LVQDGLAAFVAAHAAELDALVAQDADDRFEYFGLRTVYDRYLLRHPRTRQVLERPQHFFL 131
Query: 173 RVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
RV+ G+ + ++ A + Y +MS + +SPTLFN+G+ RPQLSSCFL+ D +E IY
Sbjct: 132 RVACGL-SETVEEAAELYALMSTLSYLPSSPTLFNSGSRRPQLSSCFLLDSPRDELEAIY 190
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E + A +SK AGGIG++ +R+ GS IRGTNG SNGIVP LR + + V+QGG +
Sbjct: 191 ERYGQVARLSKYAGGIGIAWTRVRSRGSLIRGTNGHSNGIVPWLRTLDSSVAAVNQGG-R 249
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA VYLE WHAD+ EFL L+ N G+E R +L A W+PD FM RV+ +G WSLF
Sbjct: 250 RKGAACVYLESWHADVEEFLELRDNTGEEARRTHNLNLANWIPDEFMRRVEADGVWSLFD 309
Query: 353 PNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCN 412
P E L D +GA FE+ Y E EG+ K + A++L+ ++ + +TG +M FKD N
Sbjct: 310 PKEVPHLTDLYGAAFEEAYRAAEAEGRYVKQIPARSLYGRMMRTLAQTGNGWMTFKDAAN 369
Query: 413 RKSNQ--QNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
R SNQ + I SNLCTEI+E T+ ETAVCNL SI L + +DV
Sbjct: 370 RTSNQTARPENVIHLSNLCTEILEVTNDAETAVCNLGSINLAAHLDGRDV---------- 419
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
D+ +L L++ ID+ +YP A +N + RPIG+GV GLAD
Sbjct: 420 ----------DWTRLRRTVRTAVRFLDRTIDLGFYPTPEAGTANRKWRPIGLGVMGLADV 469
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW 590
L + F+SP+A +L+ I E I A TSS++A + G + +Y ++ + G+L PD +
Sbjct: 470 LFALRLPFDSPQALELSTRISEEIALAAYATSSDLAVERGRHPSYDDTRAAAGVLHPDHY 529
Query: 591 NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLS 650
S +W LRD I++ G+RNSL++A PTA+ + I G EC EP SNI+ R LS
Sbjct: 530 GAARSP--EWAALRDRIAETGLRNSLMIAIAPTATIASIAGCYECIEPQVSNIFKRETLS 587
Query: 651 GEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTL 710
GEF+ VN++L+ DL G+W+P I++ I DGSVQ +P +PE+LK +Y+T WE+ Q L
Sbjct: 588 GEFLQVNRYLVRDLQARGLWTPQIRDAIKRADGSVQDVPGMPEDLKSLYRTAWELPQKAL 647
Query: 711 VDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFT 770
+D+A R YIDQSQSLN+ M P K++S++ W GLKT YYLRSR A + T
Sbjct: 648 IDLAAARTPYIDQSQSLNLFMATPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRIAQTT 706
Query: 771 VDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
V +V PE V CSL N E C AC
Sbjct: 707 VAQAV--PDPEA-------------VACSLENPEYCDAC 730
>gi|75677069|ref|YP_319490.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrobacter
winogradskyi Nb-255]
gi|74421939|gb|ABA06138.1| ribonucleotide reductase large subunit [Nitrobacter winogradskyi
Nb-255]
Length = 969
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 310/797 (38%), Positives = 440/797 (55%), Gaps = 62/797 (7%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DG A+ ++TA +++ GL +L + +Y G++ +L + A
Sbjct: 157 DGSLIALDTPRLTAVVEEACAGLGDVSASAILT--ETHRNLYDGISVDELAQAPILAART 214
Query: 67 MTTNHPDYASLAARI------------AVSNLHKNTKKSFSETIKDMYNHYNERSGLKAP 114
+ PDYA ++AR+ L + T+ +E D + Y R+G+
Sbjct: 215 LVETDPDYAKVSARLLLDKMRREALSFVAGRLEQATQAEMAERYADYFLSY-VRAGIDHE 273
Query: 115 LIADDIYEIIM-KNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMR 173
L+ +I + + AA L E RD +DY G +TL Y L V+ E PQ MR
Sbjct: 274 LLDPEIGRFDLDRLAAALKPE----RDLRFDYLGLQTLYDRYFLHVRSVRFELPQAFFMR 329
Query: 174 VSIGIHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
V+ G+ +ID AI Y ++S F ++PTLFNAGT RPQLSSCFL + DD ++G
Sbjct: 330 VACGLALREIDREEKAIAFYDLLSSFDFMASTPTLFNAGTLRPQLSSCFLTTVADD-LDG 388
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I++ +K+ A++SK AGG+G +R G++I+GTNG S G+VP L+V NDTA V+QGG
Sbjct: 389 IFKAIKDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGESQGVVPFLKVANDTAIAVNQGG 448
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KRKGA YLE WH DI EFL+L+KN G + R D+ A WVPDLFM+RV+ +G W+L
Sbjct: 449 -KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEEDGMWTL 507
Query: 351 FCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYM 405
F P+E L D G F Y +YE E + K V+A +LW +LT ETG P++
Sbjct: 508 FSPDETPDLHDLTGKAFAGRYAYYEEKAARGELRVTKQVRAVDLWRRMLTMLFETGHPWI 567
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
FKD CN +S QQ+ G + SSNLCTEI TS TE AVCNL S+ L +++ +
Sbjct: 568 TFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSNTEVAVCNLGSVNLVNHIKDGKL----- 622
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
D E LA I L+ ++DVN+Y + AR SNLRHRP+G+G+
Sbjct: 623 ---------------DHEHLARTVRIAMRMLDNVLDVNFYTIPEARTSNLRHRPVGLGIM 667
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
G D +L + + S EA + E I YHA+ S E+AA+ G Y +Y S SKG+L
Sbjct: 668 GFQDALNILRLPYASDEAVSFADESMEAIAYHAISGSVELAAERGRYPSYQGSLWSKGVL 727
Query: 586 QPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
D ++ S R DW LR + G+RNS +A PTA+ S I G ++
Sbjct: 728 PLDSLELVDEARGAEVDIDRSSRLDWDSLRQRVMTIGMRNSNCMAIAPTATISNICGVSQ 787
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
EP N+Y + +SG+F VVN HL+ DL G+W + + + Y DGSV +I +P++
Sbjct: 788 SIEPAYQNLYVKSNMSGDFTVVNAHLVRDLKARGLWDEVMISDLKYFDGSVGEIDRVPDD 847
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
LK +Y T +EI L+D A R +IDQ+QSLN+++ P+ KK+ +L+ W RGLKT
Sbjct: 848 LKALYATAFEIDSAWLIDAAARRQKWIDQAQSLNLYIANPSGKKLDALYRHAWKRGLKT- 906
Query: 755 MYYLRSRAAADAIKFTV 771
YYLRSR+A K T+
Sbjct: 907 TYYLRSRSATHVEKSTL 923
>gi|357391821|ref|YP_004906662.1| putative ribonucleoside-diphosphate reductase subunit alpha
[Kitasatospora setae KM-6054]
gi|311898298|dbj|BAJ30706.1| putative ribonucleoside-diphosphate reductase subunit alpha
[Kitasatospora setae KM-6054]
Length = 804
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 313/812 (38%), Positives = 448/812 (55%), Gaps = 43/812 (5%)
Query: 15 FDKITARLKKLSYGLSTE--HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHP 72
F A L +L ST+ DP V+ G + G ++L LA E AA+M P
Sbjct: 18 FTDPGAALLRLLTDRSTDLPQVDPGHVAAAALRGRHAGSDFAELRGLAVEAAASMIAEDP 77
Query: 73 DYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNA 128
Y+ LAAR+ + SFS ++ G LI D + +A
Sbjct: 78 QYSKLAARLLALEIRDEAATQQVTSFSSSVA---------VGHAEGLIGDATAAFVAAHA 128
Query: 129 ACLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVS----IGIHKDD 182
DS + D ++YFG +T++ YLL+ + KVVE PQH L+RV+ +G ++
Sbjct: 129 DLFDSLVDEAGDDRFEYFGLRTVQSRYLLRHPITRKVVETPQHFLLRVAAGLAVGTSEES 188
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVIS 242
+ + Y +MS+ + +SPTLFN+GT PQ+SSC+L+ D+++ IY + A +S
Sbjct: 189 VREVAELYTLMSRLEYLTSSPTLFNSGTRHPQMSSCYLLDSPLDNLDSIYNRYAQIARLS 248
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K AGGIG+S IR+ GS IRGTNG SNGIVP LR + + V+QGG +RKGA VYLE
Sbjct: 249 KHAGGIGLSYSRIRSRGSLIRGTNGQSNGIVPFLRTLDSSVAAVNQGG-RRKGAACVYLE 307
Query: 303 PWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADC 362
WHADI EFL L+ N G+E R +L A W+PD FM RV N WSLF P + L D
Sbjct: 308 TWHADIEEFLELRDNTGEEARRTHNLNLAHWIPDEFMRRVNANADWSLFSPADVPELVDL 367
Query: 363 WGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG- 421
WGA+F++ Y E GKA + + AQ L+ ++ + +TG +M FKD NR +NQ L
Sbjct: 368 WGADFDEAYVKAELAGKAVRTIPAQTLYARMMRTLAQTGNGWMTFKDASNRAANQTALPG 427
Query: 422 -TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFF 480
T+ SSNLCTEI+E T +ETAVCNL S+ L V P + +
Sbjct: 428 RTVHSSNLCTEILEVTDDSETAVCNLGSVNLGAHV----APGATAADLL--------NAM 475
Query: 481 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFES 540
D+++L L+++ID+N+YP A SN R RP+G+GV GL D F L + F+S
Sbjct: 476 DWDRLDATVRTAVTFLDRVIDINFYPTTEAGTSNSRWRPVGLGVMGLQDVFFQLRIDFDS 535
Query: 541 PEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW---NVIPSDR 597
EA L+ I E I A + S+++A + G +E Y + ++G L D + N ++R
Sbjct: 536 AEAVALSTLIAERIMLTAYERSADLAERFGRHEAYGETRAARGQLHVDHFGAANPQWTER 595
Query: 598 WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WD LR I++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN
Sbjct: 596 WD--ALRARIAEVGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVN 653
Query: 658 KHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDR 717
+L+ +L E+G+W ++ + +GS+Q+ +P+E++ +Y+T WE+ Q L+D+A R
Sbjct: 654 PYLVRELKELGVWDQQTRDALRDANGSIQEFNWLPQEVRSLYRTAWELPQRALIDLAAAR 713
Query: 718 GCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFK 777
YIDQSQSLN+ M P K++S++ W GLKT YYLRSR A I +
Sbjct: 714 QPYIDQSQSLNLFMAAPTIGKLSSMYSYAWKVGLKT-TYYLRSRPATR-IAQAAPGAART 771
Query: 778 EKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
P + + + + CSL N E C AC
Sbjct: 772 AAPVPVQTPTLSQAEQDAIACSLENPESCEAC 803
>gi|34497742|ref|NP_901957.1| ribonucleotide-diphosphate reductase subunit alpha [Chromobacterium
violaceum ATCC 12472]
gi|34103598|gb|AAQ59959.1| ribonucleoside-diphosphate reductase system [Chromobacterium
violaceum ATCC 12472]
Length = 972
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 317/836 (37%), Positives = 462/836 (55%), Gaps = 58/836 (6%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V+++DGR+ + ++ A ++ S L+ D +L + +Y GV ++ + A
Sbjct: 165 VLRKDGRKLPLDVPRLRASIEAASKNLAGIDVDAILA--ETLKNIYDGVPEEEVGKSAIL 222
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHK---NTKKSFSETIKDMYNHYNE--RSGLKAPLIA 117
A +M P Y + AR+ + N+ S E K ++ + + G+ A L+
Sbjct: 223 AARSMIEQDPAYDYVTARLLMGNIRLEILGEAVSQDEMGKQYAPYFADYIKKGIAAELLD 282
Query: 118 DDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ + E +K A LD+E RD + Y G +TL Y L V G +E PQ MRV++
Sbjct: 283 EKLAEYDLKKLGAALDAE----RDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFYMRVAM 338
Query: 177 GIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +++ D AI+ Y ++S F ++PTLFN+GT R QLSSC+L + DD ++GIYE
Sbjct: 339 GLALNEVNREDRAIEFYKVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTIADD-LDGIYE 397
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 398 GIKENALLSKFAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KR 456
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WHADI EFL L+KN G + R D+ A W+PDLFM+RV G WSLF P
Sbjct: 457 KGAVCAYLETWHADIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWSLFSP 516
Query: 354 NEASGLADCWGAEFEKLYTHYEREG-----KAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
+E L D +G FEK YT YE G K K + A +LW ++LT ETG P++ FK
Sbjct: 517 SETPDLHDLYGQAFEKAYTAYEARGARGELKVYKRIPALSLWRKMLTMLFETGHPWVTFK 576
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D CN +S QQ++G + SSNLCTEI T+ E AVCNL S+ L ++E
Sbjct: 577 DPCNIRSPQQHMGVVHSSNLCTEITLNTNDDEIAVCNLGSVNLSAHLKED---------- 626
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
GS D +KL L+ +ID+N+YPV+ AR SNL+HRP+G+G+ G
Sbjct: 627 -----GS----LDADKLQRTIRTALRMLDNVIDINFYPVKKARNSNLKHRPVGMGIMGFQ 677
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D + + + S A + + E + Y A S+E+A + G Y +Y S +G+L D
Sbjct: 678 DCLHIKRVPYGSNAAVEFADESMEMVAYFAYLASTELAEERGRYPSYSGSLWDRGVLPHD 737
Query: 589 MWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
N++ ++R DW LR+ I ++G+RNS +A PTA+ + I+G + E
Sbjct: 738 SINLLAAERGGYLEVDRTERMDWNKLRERIKQHGMRNSNCLAIAPTATIANIIGVSASIE 797
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N++ + LSGEF V N++L+ DL G+W + + Y DGS+ +I +P ELK
Sbjct: 798 PTYQNLFVKSNLSGEFTVTNEYLVRDLKAAGLWDEVMVADLKYFDGSLGQIDRVPAELKA 857
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
IY T +E+ LV+ A R +IDQ+QSLN++M + KK+ L+ W RGLKT YY
Sbjct: 858 IYATAFEVDPKWLVEAASRRQKWIDQAQSLNLYMAGASGKKLDELYKHAWLRGLKT-TYY 916
Query: 758 LRSRAAADAIKFTVD----TSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
LR+ AA A K T +V + P VD+ CS+ N +C +C
Sbjct: 917 LRTLAATSAEKSTGRGGELNAVSSQAQTAPAAAVDNTPATDAKFCSIDN-PDCESC 971
>gi|134294682|ref|YP_001118417.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
vietnamiensis G4]
gi|387901271|ref|YP_006331610.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Burkholderia sp. KJ006]
gi|134137839|gb|ABO53582.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
vietnamiensis G4]
gi|387576163|gb|AFJ84879.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Burkholderia sp. KJ006]
Length = 996
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 316/782 (40%), Positives = 436/782 (55%), Gaps = 56/782 (7%)
Query: 28 GLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNL 86
GL T + DP++ + +Y GV SQ+ + A A M P Y+ + ARI L
Sbjct: 182 GLGTAVNADPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---L 236
Query: 87 HKNTKKSFSETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYD 138
H ++ E + DM Y E + G+ A L+ D + + +K L + +
Sbjct: 237 HTIRREILGEEVVQADMSARYAEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDAN 293
Query: 139 RDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQ 195
RD + Y G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S
Sbjct: 294 RDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSS 353
Query: 196 RWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNI 255
F ++PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +
Sbjct: 354 FDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRV 412
Query: 256 RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLK 315
RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+
Sbjct: 413 RALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELR 471
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYE 375
KN G + R D+ A W+PDLFM+RV W+LF P+ L D +GA+FEK YT YE
Sbjct: 472 KNTGDDRRRTHDMNTANWIPDLFMKRVMEGSDWTLFSPSTCPDLHDKFGADFEKAYTAYE 531
Query: 376 R-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCT 430
E K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCT
Sbjct: 532 DKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCT 591
Query: 431 EIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVT 489
EI TS TE AVCNL S+ L V++ D GS D +KL
Sbjct: 592 EITLNTSDTEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTI 635
Query: 490 AIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKD 549
++ L+ +ID+NYY V AR SNL+HRP+G+G+ G D LL + S A +
Sbjct: 636 SVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADR 695
Query: 550 IFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRW 598
E + Y+A S+E+A + G Y +Y S +GIL D ++ S+
Sbjct: 696 SMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESL 755
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW LR I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN+
Sbjct: 756 DWSTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNE 815
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
+L+ DL E G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R
Sbjct: 816 YLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQ 875
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE 778
+IDQ+QSLNI+M + KK+ ++ W RGLKT YYLR+ AA K TV
Sbjct: 876 KWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNA 934
Query: 779 KP 780
P
Sbjct: 935 VP 936
>gi|107021672|ref|YP_619999.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia AU 1054]
gi|116688618|ref|YP_834241.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia HI2424]
gi|170731917|ref|YP_001763864.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia MC0-3]
gi|105891861|gb|ABF75026.1| Ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia AU 1054]
gi|116646707|gb|ABK07348.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia HI2424]
gi|169815159|gb|ACA89742.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia MC0-3]
Length = 1001
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/774 (40%), Positives = 434/774 (56%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 245 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ L D +GA+FEK YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 540 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTISVAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S EA + E + Y+
Sbjct: 644 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASQEAVEFADRSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 704 AYHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWTALRAR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 IATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 884 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|161525958|ref|YP_001580970.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
multivorans ATCC 17616]
gi|221202416|ref|ZP_03575448.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2M]
gi|221208124|ref|ZP_03581129.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2]
gi|160343387|gb|ABX16473.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans ATCC 17616]
gi|221172027|gb|EEE04469.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2]
gi|221177693|gb|EEE10108.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2M]
Length = 995
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 431/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 189 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + + +K L + RD + Y
Sbjct: 244 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLKR---LGEALDASRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G+W+LF P+ L D +GA+FE YT YE E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D D +KL ++ L+
Sbjct: 599 TEIAVCNLGSVNLVAHLVKQPD----------------GTYALDHDKLKRTISVAMRMLD 642
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 643 NVIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 702
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 703 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRAR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 763 IATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 822
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 823 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 883 LNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|221213240|ref|ZP_03586215.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD1]
gi|221166692|gb|EED99163.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD1]
Length = 995
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 431/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 189 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + + +K L + RD + Y
Sbjct: 244 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLKR---LGEALDASRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G+W+LF P+ L D +GA+FE YT YE E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D D +KL ++ L+
Sbjct: 599 TEIAVCNLGSVNLVAHLVKQPD----------------GTYALDHDKLKRTISVAMRMLD 642
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 643 NVIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 702
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 703 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRAR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 763 IATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 822
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 823 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 883 LNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|189349323|ref|YP_001944951.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
multivorans ATCC 17616]
gi|189333345|dbj|BAG42415.1| ribonucleoside-diphosphate reductase alpha chain [Burkholderia
multivorans ATCC 17616]
Length = 997
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 431/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 191 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 245
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + + +K L + RD + Y
Sbjct: 246 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLKR---LGEALDASRDLQFGYL 302
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 303 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 362
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 363 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 421
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 422 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 480
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G+W+LF P+ L D +GA+FE YT YE E
Sbjct: 481 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 540
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 541 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 600
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D D +KL ++ L+
Sbjct: 601 TEIAVCNLGSVNLVAHLVKQPD----------------GTYALDHDKLKRTISVAMRMLD 644
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 645 NVIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 704
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 705 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRAR 764
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 IATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 824
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 825 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQS 884
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 885 LNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 937
>gi|421477360|ref|ZP_15925187.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans CF2]
gi|400226640|gb|EJO56703.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans CF2]
Length = 957
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 431/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 189 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + + +K L + RD + Y
Sbjct: 244 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLKR---LGEALDASRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G+W+LF P+ L D +GA+FE YT YE E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D D +KL ++ L+
Sbjct: 599 TEIAVCNLGSVNLVAHLVKQPD----------------GTYALDHDKLKRTISVAMRMLD 642
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 643 NVIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 702
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 703 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRAR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 763 IATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 822
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 823 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 883 LNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|421473516|ref|ZP_15921619.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans ATCC BAA-247]
gi|400220732|gb|EJO51244.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans ATCC BAA-247]
Length = 939
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 431/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 189 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + + +K L + RD + Y
Sbjct: 244 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLKR---LGEALDASRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G+W+LF P+ L D +GA+FE YT YE E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D D +KL ++ L+
Sbjct: 599 TEIAVCNLGSVNLVAHLVKQPD----------------GTYALDHDKLKRTISVAMRMLD 642
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 643 NVIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 702
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 703 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRAR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 763 IATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 822
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 823 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 883 LNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|291615086|ref|YP_003525243.1| ribonucleoside-diphosphate reductase, subunit alpha [Sideroxydans
lithotrophicus ES-1]
gi|291585198|gb|ADE12856.1| ribonucleoside-diphosphate reductase, alpha subunit [Sideroxydans
lithotrophicus ES-1]
Length = 946
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/795 (39%), Positives = 449/795 (56%), Gaps = 59/795 (7%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNL------HKNTKKSFSETIKD 100
+Y GV ++ + A +A + P Y+ + AR+ ++N+ + ++ +E +
Sbjct: 178 LYDGVAVEEVRKCAILSARTLIEQDPAYSFVTARLLLNNICCEILGGQVSQADMAERYAE 237
Query: 101 MYNHYNERSGLKAPLIADDIYEIIM-KNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + +R G++A L+ +++ + + A LDS RD ++Y G +TL Y L V
Sbjct: 238 YFPKFIKR-GIEAELLNEELGHFDLDRLAGALDSS----RDLQFNYLGLQTLYDRYFLHV 292
Query: 160 QGKVVERPQHMLMRVSIGIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
G+ +E PQ MRV++G+ ++I + AI+ Y ++S F ++PTLFN+GT R QLS
Sbjct: 293 DGQRIELPQAFFMRVAMGLSLNEINREERAIEFYRLLSSFDFMSSTPTLFNSGTRRSQLS 352
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+I+GTNG S G+VP L
Sbjct: 353 SCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKGTNGKSQGVVPFL 411
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ + W+PD
Sbjct: 412 KVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTSNWIPD 470
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWF 391
LFM+RV G+W+LF P+ L D +GAEFEK YT YE E K K V AQ+LW
Sbjct: 471 LFMKRVMEGGEWTLFSPSTCPDLHDKFGAEFEKAYTAYEAKVASGELKLFKKVPAQSLWR 530
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
++LT ETG P++ FKD CN +S QQ++G + SSNLCTEI TS +E AVCNL S+ L
Sbjct: 531 KMLTMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTSDSEIAVCNLGSVNL 590
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
+ K H +K D +KL + L+ +ID+NYY V AR
Sbjct: 591 AAHLFPK-----GH---------AKAGQIDHDKLKRTVSTAMRMLDNVIDINYYAVAKAR 636
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SNL+HRP+G+G+ G D L + + S A + E + Y+A S+++AA+ G
Sbjct: 637 NSNLKHRPVGLGIMGFQDCLHDLRIPYSSDAAIEFADRSMEAVCYYAYWASTDLAAERGR 696
Query: 572 YETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAP 620
Y +Y S KGIL D N++ R DW LR I +NG+RNS VA
Sbjct: 697 YASYRGSLWDKGILPQDSLNLLLEQRGGYVEVDMSSNLDWDALRARIQQNGMRNSNCVAI 756
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ S I+G + C EP NI+ + LSGEF V+N HL++DL +G+W + + Y
Sbjct: 757 APTATISNIIGVSACIEPTYQNIFVKSNLSGEFTVINDHLVNDLKALGLWDEVMIADLKY 816
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
DGS+ KI IP EL+ +Y T +E++ L++ A R +IDQ+QSLNI+M + +K+
Sbjct: 817 FDGSLAKIDRIPAELRELYATAFEVEPKWLIEAASRRQKWIDQAQSLNIYMSGVSGRKLD 876
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE------KPEKPELVVDDETKMA 794
+ W RGLKT YYLR+ A A K T E V +E K
Sbjct: 877 ETYKLAWLRGLKT-TYYLRALGATSAEKSTSRAGSLNAVSSGGGAGEMSASPVVEEAKF- 934
Query: 795 QVVCSLTNREECMAC 809
CS+ N EC AC
Sbjct: 935 ---CSIDN-PECEAC 945
>gi|350545920|ref|ZP_08915360.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Candidatus Burkholderia kirkii UZHbot1]
gi|350526296|emb|CCD40808.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Candidatus Burkholderia kirkii UZHbot1]
Length = 1013
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 307/772 (39%), Positives = 427/772 (55%), Gaps = 49/772 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNT--- 90
DP++ + +Y GV SQ+ + A A M P Y+ + ARI + + +
Sbjct: 193 ADPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEG 250
Query: 91 ---KKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFG 147
+ E + + + +R G++A L+ D + + +K L + + +RD + Y G
Sbjct: 251 EVPQAEMGERYAEYFPLFIKR-GVEAGLLDDKLQQFDLKR---LGTALDTNRDLQFGYLG 306
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L V G +E PQ MRV++G+ ++ID AI+ Y ++S F ++PT
Sbjct: 307 LQTLYDRYFLHVDGTRIELPQAFFMRVAMGLSLNEIDREARAIEFYQVLSSFDFMSSTPT 366
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+G
Sbjct: 367 LFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 425
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R
Sbjct: 426 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRR 484
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGK 379
D+ A W+PDLFM+RV G W+LF P+ L D +GA+FEK YT YE E K
Sbjct: 485 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEEKAARGEIK 544
Query: 380 AKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS T
Sbjct: 545 LFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDT 604
Query: 440 ETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKI 499
E AVCNL S+ L + E+ D KL ++ L+ +
Sbjct: 605 EIAVCNLGSVNLVAHIVEQ---------------ADSTYALDHAKLKRTISVAMRMLDNV 649
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHAL 559
ID+NYY V AR SNLRHRP+G+G+ G D LL + S EA + E + Y+A
Sbjct: 650 IDINYYAVPKARNSNLRHRPVGMGIMGFQDCLYLLRTPYASAEAVEFADRSMEAVCYYAY 709
Query: 560 KTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMIS 608
S+E+A + G Y +Y S +GIL D ++ R DW LR IS
Sbjct: 710 YASTELAEERGRYSSYRGSLWDRGILPQDSLKLLAEARGGYVEVDTSASMDWPALRSRIS 769
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G
Sbjct: 770 TYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 829
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+W + + + Y DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QSLN
Sbjct: 830 LWDEVMVSDLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAAAHRQKWIDQAQSLN 889
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
I+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 890 IYMAGASGKKLDEVYKLAWIRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 940
>gi|416907777|ref|ZP_11931087.1| ribonucleotide-diphosphate reductase subunit alpha, partial
[Burkholderia sp. TJI49]
gi|325528899|gb|EGD05935.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. TJI49]
Length = 963
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/774 (40%), Positives = 432/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 191 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 245
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + RD + Y
Sbjct: 246 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGDALDASRDLQFGYL 302
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 303 GLQTLYDRYFLHVGGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 362
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 363 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 421
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 422 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 480
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G+W+LF P+ L D +GAEFE YT YE E
Sbjct: 481 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGAEFEAAYTAYEEKVARGEI 540
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 541 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTSD 600
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 601 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTISVAMRMLD 644
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 645 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 704
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 705 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWTALRAR 764
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 IAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 824
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 825 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 884
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 885 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 937
>gi|224825452|ref|ZP_03698557.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudogulbenkiania ferrooxidans 2002]
gi|224602373|gb|EEG08551.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudogulbenkiania ferrooxidans 2002]
Length = 949
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 317/842 (37%), Positives = 463/842 (54%), Gaps = 69/842 (8%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
VV+++G + + K+ A ++ GL+ D +L + +Y GV+ ++++ A
Sbjct: 141 VVRKNGAKLPLDIAKLRATIESACVGLAETDVDAILT--ETLKNIYDGVSEEEVNKSAIL 198
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYNHYNERS---GLKAPLIA 117
A AM P Y + AR+ ++N+ + E + + Y Y ++ G+ A L+
Sbjct: 199 AARAMIEQDPAYDYVTARLLLNNIRLEILGEAVSQEEMGECYVSYFPQAIKKGIAAELLD 258
Query: 118 DDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ + E +K A LD+ RD + Y G +TL Y L V G +E PQ MRV++
Sbjct: 259 ERLGEYDLKKLGAALDAS----RDLQFGYLGLQTLYDRYFLHVNGTRIEMPQAFYMRVAM 314
Query: 177 GIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ ++++ AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIYE
Sbjct: 315 GLALNEVEREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTIADD-LDGIYE 373
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 374 GIKENALLSKFAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KR 432
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EF+ L+KN G + R D+ A W+PDLFM+RV +W+L P
Sbjct: 433 KGAVCAYLETWHLDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVMDGAEWTLLSP 492
Query: 354 NEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
+E L D GA FEK Y YE E K K + A +LW ++LT ETG P++ FK
Sbjct: 493 SECPDLHDLVGAAFEKRYQEYEAMAARGEIKVSKRIPALSLWRKMLTMLFETGHPWITFK 552
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D CN +S Q ++G + SSNLCTEI T+ E AVCNL S+ L R ++
Sbjct: 553 DPCNIRSPQGHMGVVHSSNLCTEITLNTNDDEIAVCNLGSVNLARHMQADGT-------- 604
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
D KL I L+ +ID+N+YPV+ AR SNL+HRP+G+G+ G
Sbjct: 605 -----------LDGAKLQRTIRIAMRMLDNVIDINFYPVKKARNSNLKHRPVGMGIMGFQ 653
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D + + + S EA + + E + YHA SSE+A + G Y +Y S +G+L D
Sbjct: 654 DCLHMKRIPYASQEAVEFADESMELVAYHAYWASSELAQERGRYPSYKGSLWDRGVLPHD 713
Query: 589 MWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
N++ ++R DW LR+ I ++G+RNS +A PTA+ + I+G + E
Sbjct: 714 SINLLAAERGGYLDVDRTERLDWNKLRERIKEHGMRNSNCLAIAPTATIANIIGVSASIE 773
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N++ + LSGEF V N+HL+ DL ++G+W + + + Y DGS+ +I IP ELK
Sbjct: 774 PTYQNLFVKSNLSGEFTVTNEHLVRDLKKLGLWDEVMVSDLKYFDGSLGRIDRIPAELKA 833
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
IY T +E+ LVD A R +IDQ+QSLN++M + KK+ L+ W RGLKT YY
Sbjct: 834 IYATAFEMDPKWLVDAASRRQKWIDQAQSLNLYMAGASGKKLDELYKYAWVRGLKT-TYY 892
Query: 758 LRSRAAADAIKFT----------VDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECM 807
LR+ AA A K T T PE VD+ CS+ N +C
Sbjct: 893 LRTLAATSAEKSTGRGGELNAVSATTPAVSAAPE-----VDNTPATDAKFCSIDN-PDCE 946
Query: 808 AC 809
AC
Sbjct: 947 AC 948
>gi|167586059|ref|ZP_02378447.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
ubonensis Bu]
Length = 990
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 312/774 (40%), Positives = 432/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 188 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 242
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 243 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGDALDANRDLQFGYL 299
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 300 GLQTLYDRYFLHVDGSRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 359
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 360 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 418
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 419 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 477
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ L D +GAEFE YT YE E
Sbjct: 478 RTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFETAYTAYEDKVARGEI 537
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 538 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 597
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 598 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTVSVAMRMLD 641
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 642 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASQAAVEFADRSMEAVCYY 701
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 702 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWSELRSR 761
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 762 IAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 821
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I +P +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 822 RGLWDEVMVADLKYFDGMLSRIDRVPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 881
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 882 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 934
>gi|347539724|ref|YP_004847149.1| ribonucleoside-diphosphate reductase subunit alpha
[Pseudogulbenkiania sp. NH8B]
gi|345642902|dbj|BAK76735.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudogulbenkiania sp. NH8B]
Length = 949
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 317/842 (37%), Positives = 463/842 (54%), Gaps = 69/842 (8%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
VV+++G + + K+ A ++ GL+ D +L + +Y GV+ ++++ A
Sbjct: 141 VVRKNGAKLPLDIAKLRATIESACTGLAETDVDAILT--ETLKNIYDGVSEEEVNKSAIL 198
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYNHYNERS---GLKAPLIA 117
A AM P Y + AR+ ++N+ + E + + Y Y ++ G+ A L+
Sbjct: 199 AARAMIEQDPAYDYVTARLLLNNIRLEILGEAVSQEEMGECYVSYFPQAIKKGIAAELLD 258
Query: 118 DDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ + E +K A LD+ RD + Y G +TL Y L V G +E PQ MRV++
Sbjct: 259 ERLGEYDLKKLGAALDAS----RDLQFGYLGLQTLYDRYFLHVNGTRIEMPQAFYMRVAM 314
Query: 177 GIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ ++++ AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIYE
Sbjct: 315 GLALNEVEREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTIADD-LDGIYE 373
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 374 GIKENALLSKFAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KR 432
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EF+ L+KN G + R D+ A W+PDLFM+RV +W+L P
Sbjct: 433 KGAVCAYLETWHLDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVMDGAEWTLLSP 492
Query: 354 NEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
+E L D GA FEK Y YE E K K + A +LW ++LT ETG P++ FK
Sbjct: 493 SECPDLHDLVGAAFEKRYQEYEAMAARGEIKVSKRIPALSLWRKMLTMLFETGHPWITFK 552
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D CN +S Q ++G + SSNLCTEI T+ E AVCNL S+ L R ++
Sbjct: 553 DPCNIRSPQGHMGVVHSSNLCTEITLNTNDDEIAVCNLGSVNLARHMQADGT-------- 604
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
D KL I L+ +ID+N+YPV+ AR SNL+HRP+G+G+ G
Sbjct: 605 -----------LDGAKLQRTIRIAMRMLDNVIDINFYPVKKARNSNLKHRPVGMGIMGFQ 653
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D + + + S EA + + E + YHA SSE+A + G Y +Y S +G+L D
Sbjct: 654 DCLHMKRIPYASQEAVEFADESMELVAYHAYWASSELAQERGRYPSYKGSLWDRGVLPHD 713
Query: 589 MWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
N++ ++R DW LR+ I ++G+RNS +A PTA+ + I+G + E
Sbjct: 714 SINLLAAERGGYLDVDRTERLDWNKLRERIKEHGMRNSNCLAIAPTATIANIIGVSASIE 773
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N++ + LSGEF V N+HL+ DL ++G+W + + + Y DGS+ +I IP ELK
Sbjct: 774 PTYQNLFVKSNLSGEFTVTNEHLVRDLKKLGLWDEVMVSDLKYFDGSLGRIDRIPAELKA 833
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
IY T +E+ LVD A R +IDQ+QSLN++M + KK+ L+ W RGLKT YY
Sbjct: 834 IYATAFEMDPKWLVDAASRRQKWIDQAQSLNLYMAGASGKKLDELYKYAWVRGLKT-TYY 892
Query: 758 LRSRAAADAIKFT----------VDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECM 807
LR+ AA A K T T PE VD+ CS+ N +C
Sbjct: 893 LRTLAATSAEKSTGRGGELNAVSATTPAVSAAPE-----VDNTPATDAKFCSIDN-PDCE 946
Query: 808 AC 809
AC
Sbjct: 947 AC 948
>gi|115350551|ref|YP_772390.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
ambifaria AMMD]
gi|115280539|gb|ABI86056.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria AMMD]
Length = 999
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 431/774 (55%), Gaps = 53/774 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
+P + + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 188 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 245 GEEVLQAEMTTRYTEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV W+LF P+ L D +GAEFE YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTISVAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 644 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 704 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 IAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 884 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|186477387|ref|YP_001858857.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
phymatum STM815]
gi|184193846|gb|ACC71811.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
phymatum STM815]
Length = 997
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 307/762 (40%), Positives = 427/762 (56%), Gaps = 53/762 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNH 104
+Y GV SQ+ + A A M P Y+ + +RI LH ++ E + +M
Sbjct: 195 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRIL---LHTIRREILEEEVTQAEMAGR 251
Query: 105 YNE------RSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLL 157
Y E + G+ A L+ D + + +K A LD+ +RD + Y G +TL Y L
Sbjct: 252 YAEYFPLFIKRGVNAELLDDKLLQFDLKRLGAALDA----NRDLQFGYLGLQTLYDRYFL 307
Query: 158 KVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQ 214
+ G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R Q
Sbjct: 308 HIDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQ 367
Query: 215 LSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVP 274
LSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP
Sbjct: 368 LSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVP 426
Query: 275 MLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWV 334
L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+
Sbjct: 427 FLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWI 485
Query: 335 PDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNL 389
PDLFM+RV G W+LF P+ L D +GAEFE YT YE E K K + A L
Sbjct: 486 PDLFMKRVLEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQL 545
Query: 390 WFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASI 449
W ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+
Sbjct: 546 WRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSV 605
Query: 450 ALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVET 509
L ++E+ D +KL ++ L+ +ID+NYY V
Sbjct: 606 NLVAHLKEQ---------------ADGTLALDHDKLKRTISVAMRMLDNVIDINYYAVAK 650
Query: 510 ARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKE 569
AR SNL+HRP+G+G+ G D +L + S EA + E + Y+A S+E+A +
Sbjct: 651 ARNSNLKHRPVGMGIMGFQDCLHVLRTPYASQEAVEFADRSMEAVCYYAYWASTELAEER 710
Query: 570 GPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLV 618
G Y TY S +GIL D ++ S+ DW LR I+ +G+RNS V
Sbjct: 711 GRYSTYRGSLWDRGILPQDTLKLLADARGGYVEVDSSESMDWASLRSRIATHGMRNSNCV 770
Query: 619 APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKI 678
A PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL G+W + +
Sbjct: 771 AIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKARGLWDEVMVADL 830
Query: 679 IYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKK 738
Y DGS+ +I +P +L+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK
Sbjct: 831 KYFDGSLSRIDRVPADLRAIYATAFEVDATWLVEAASRRQKWIDQAQSLNIYMAGASGKK 890
Query: 739 VTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 891 LDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 931
>gi|206561766|ref|YP_002232531.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia J2315]
gi|198037808|emb|CAR53752.1| putative ribonucleoside reductase [Burkholderia cenocepacia J2315]
Length = 1003
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 312/774 (40%), Positives = 432/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 192 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 246
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 247 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 303
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 304 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 363
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 364 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 422
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 423 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 481
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV W+LF P+ L D +GA+FEK YT YE E
Sbjct: 482 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 541
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 542 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 601
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 602 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTISVAMRMLD 645
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 646 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 705
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 706 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSR 765
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 766 IAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 825
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 826 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 885
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 886 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 938
>gi|444364598|ref|ZP_21164888.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia BC7]
gi|444365873|ref|ZP_21165977.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia K56-2Valvano]
gi|443592687|gb|ELT61473.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia BC7]
gi|443605444|gb|ELT73298.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia K56-2Valvano]
Length = 1001
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 312/774 (40%), Positives = 432/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 245 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV W+LF P+ L D +GA+FEK YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTISVAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 644 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 704 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 IAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 884 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|421867552|ref|ZP_16299210.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Burkholderia cenocepacia H111]
gi|358072490|emb|CCE50088.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Burkholderia cenocepacia H111]
Length = 1001
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 312/774 (40%), Positives = 432/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 245 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV W+LF P+ L D +GA+FEK YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTISVAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 644 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 704 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 IAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 884 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|413958909|ref|ZP_11398148.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. SJ98]
gi|413941489|gb|EKS73449.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. SJ98]
Length = 1000
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/761 (40%), Positives = 427/761 (56%), Gaps = 51/761 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI + + + T+ E +
Sbjct: 200 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 259
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + +R G++A L+ D + + +K A LD +RD + Y G +TL Y L V
Sbjct: 260 YFPQFIKR-GVEAGLLDDKLQQFDLKRLGAALDQ----NRDLQFGYLGLQTLYDRYFLHV 314
Query: 160 QGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLS
Sbjct: 315 DGTRIELPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLS 374
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L
Sbjct: 375 SCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFL 433
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PD
Sbjct: 434 KVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPD 492
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWF 391
LFM+RV G W+LF P+ L D +GA+FEK Y YE E K K + A LW
Sbjct: 493 LFMKRVVEGGDWTLFSPSTCPDLHDLFGADFEKAYVAYEEKAARGEIKLFKKLPAAQLWR 552
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L
Sbjct: 553 KMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSETEIAVCNLGSVNL 612
Query: 452 -PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETA 510
V++ D GS D KL ++ L+ +ID+NYY V A
Sbjct: 613 VAHMVKQAD-----------GSYA-----LDHAKLKRTISVAMRMLDNVIDINYYAVPKA 656
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG 570
R SNL+HRP+G+G+ G D LL + S EA + E + Y+A S+E+A + G
Sbjct: 657 RNSNLKHRPVGMGIMGFQDCLHLLRTPYASGEAVEFADRSMEAVCYYAYYASTELAEERG 716
Query: 571 PYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVA 619
Y TY S +GIL D ++ S+ DW LR IS G+RNS VA
Sbjct: 717 RYATYRGSLWDRGILPQDSLKLLAEARGGYVEVDTSETMDWAQLRSRISTYGMRNSNCVA 776
Query: 620 PMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKII 679
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G+W + + +
Sbjct: 777 IAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVSDLK 836
Query: 680 YDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKV 739
Y DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 837 YFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKL 896
Query: 740 TSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
++ W RGLKT YYLR+ AA K TV P
Sbjct: 897 DEVYKLAWIRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|172059583|ref|YP_001807235.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
ambifaria MC40-6]
gi|171992100|gb|ACB63019.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria MC40-6]
Length = 999
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 431/774 (55%), Gaps = 53/774 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
+P + + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 188 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 245 GEEVLQAEMATRYTEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV W+LF P+ L D +GAEFE YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDQDKLKRTISVAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 644 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 704 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 IAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 884 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|375107585|ref|ZP_09753846.1| ribonucleoside-diphosphate reductase, alpha subunit
[Burkholderiales bacterium JOSHI_001]
gi|374668316|gb|EHR73101.1| ribonucleoside-diphosphate reductase, alpha subunit
[Burkholderiales bacterium JOSHI_001]
Length = 972
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 312/810 (38%), Positives = 450/810 (55%), Gaps = 62/810 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDEL 59
++V R G++ + F + A ++ GL E +P+L + +Y GV ++ +
Sbjct: 147 LHVTDR-GQRVPLDFAALQALVESSCAGLGAEVKAEPILAETR--RNLYDGVPIDEVYKA 203
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSE--TIKDMYNHYNE------RSGL 111
A A + P Y AR+ LH K+ E T M Y E + G+
Sbjct: 204 AILAARTLIEKDPAYTRATARLL---LHTVRKEIVGEELTQAQMATRYAEYFPQFIKKGI 260
Query: 112 KAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHML 171
+A + + + + A L + I +RD +DY G +TL Y + V + +E PQ
Sbjct: 261 EAERLDAKMAQF---DLAALGAAIQPERDMQFDYLGLQTLYDRYFIHVDERRIEMPQAFF 317
Query: 172 MRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSI 228
MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD +
Sbjct: 318 MRVAMGLALNEIDREARAIEFYNVLSTFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-L 376
Query: 229 EGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
+GIYE LKE A++SK AGG+G +RA GSYI+GTNG S G+VP L+V NDTA V+Q
Sbjct: 377 DGIYEALKENALLSKFAGGLGNDWTRVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQ 436
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQW 348
GG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV G W
Sbjct: 437 GG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDW 495
Query: 349 SLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTP 403
+LF P+ L D +GA+FE YT YE E K K V A++LW ++LT ETG P
Sbjct: 496 TLFSPSTCPDLHDKFGADFEAAYTAYEAKADRGELKLFKRVPAKDLWRKMLTMLFETGHP 555
Query: 404 YMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVE 463
++ FKD CN +S QQ+ G + SSNLCTEI TS TE AVCNL S+ L + +++ +
Sbjct: 556 WVTFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLAQHLKDGSI--- 612
Query: 464 SHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIG 523
D +KL + A L+ +ID+NYY V+ AR SNLRHRP+G+G
Sbjct: 613 -----------------DHDKLKKTVATAMRMLDNVIDINYYAVKKARDSNLRHRPVGLG 655
Query: 524 VQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKG 583
+ G D L + + S EA + E + YHA SS++AA+ G Y +Y S +G
Sbjct: 656 IMGFQDALYQLRLPYASAEAVEFADRSMEAVCYHAYAASSDLAAERGRYSSYRGSLWDRG 715
Query: 584 ILQPDMWNVIPSDR-------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQIL 630
IL D +++ R DW LR I+++G+RNS VA PTA+ S I+
Sbjct: 716 ILPHDTLDLLAQARGGAEFVQVDRSATLDWDALRARIAQHGMRNSNCVAIAPTATISNII 775
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPE 690
G + EP N+ + LSGEF +VN++L+ DL ++G+W + + + DGS+++I
Sbjct: 776 GVDASIEPCFGNLSVKSNLSGEFTIVNEYLVRDLKKLGLWDDVMVMDLKHFDGSLRRIDR 835
Query: 691 IPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRG 750
+P E+K +Y T +E+ LV+ A R +IDQ+QSLNI++ + KK+ ++ W RG
Sbjct: 836 VPPEVKALYATAFEVDAQWLVEAAARRQKWIDQAQSLNIYLAGASGKKLDEIYKLAWLRG 895
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LKT YYLR+ A A K TV P
Sbjct: 896 LKT-TYYLRTMGATHAEKSTVSAGSMNAVP 924
>gi|170699975|ref|ZP_02891002.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria IOP40-10]
gi|170135123|gb|EDT03424.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria IOP40-10]
Length = 999
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 431/774 (55%), Gaps = 53/774 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
+P + + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 187 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 244 GEEVLQAEMSTRYTEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV W+LF P+ L D +GAEFE YT YE E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGTDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 599 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTISVAMRMLD 642
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 643 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 702
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 703 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 763 IAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 822
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 823 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 883 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|374620691|ref|ZP_09693225.1| ribonucleoside-diphosphate reductase, alpha subunit [gamma
proteobacterium HIMB55]
gi|374303918|gb|EHQ58102.1| ribonucleoside-diphosphate reductase, alpha subunit [gamma
proteobacterium HIMB55]
Length = 962
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 315/837 (37%), Positives = 456/837 (54%), Gaps = 59/837 (7%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
VV DG + + ++I + + LS + + +Y GVT +L
Sbjct: 154 VVGADGTSKPLDIERIRTIVAEACMDLS--DVSEAAIIDEALKNLYNGVTEQELSTSLVI 211
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSF-----SETIKDMYNHYNERSGLKAPLIA 117
TA M P+Y+S+AAR+ + NL + SF S T DM +Y + LK+ +
Sbjct: 212 TARTMIEQEPNYSSVAARLLLDNL-RAEGLSFLNVAESATQGDMATYYPQ--ALKSFISR 268
Query: 118 DDIYEIIMKNAACLDSEIIYD-----RDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
E++ N A D +++ D RD + Y G +TL Y + E PQ M
Sbjct: 269 GIELELLAPNLAEYDLDMLGDALLPERDLQFSYLGLQTLYDRYFIHSDETRFELPQLFFM 328
Query: 173 RVSIGI--HKDDIDS-AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
RV++G+ +DD ++ AI+ Y ++S + ++PTLFN+GT RPQLSSC+L + DD +
Sbjct: 329 RVAMGLATREDDKNARAIEFYQLLSSFDYMSSTPTLFNSGTLRPQLSSCYLTTVPDD-LH 387
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIY +++ A++SK AGG+G +RA G+YI+GTNG S G+VP L+V NDTA V+QG
Sbjct: 388 GIYGAIQDNAMLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGVVPFLKVVNDTAVAVNQG 447
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G KRKGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G W+
Sbjct: 448 G-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVFEDGDWT 506
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREG-----KAKKVVQAQNLWFEILTSQIETGTPY 404
LF PN+ L D +G FE+ YT YE + K K ++AQ LW ++L ETG P+
Sbjct: 507 LFSPNDVPDLHDLYGTAFEERYTQYEEQARTGELKLHKTLKAQALWRKMLGMIFETGHPW 566
Query: 405 MLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVES 464
+ FKD CN +S QQ+ G + SSNLCTEI TS E AVCNL S+ LP+ +
Sbjct: 567 ITFKDPCNIRSPQQHCGVVHSSNLCTEITLNTSKDEIAVCNLGSVNLPQHI--------- 617
Query: 465 HPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
+N + +KL + L+ +ID+NYY VET+ SN++HRPIG+G+
Sbjct: 618 -----------ENGELNIDKLRKTVTTAIRMLDNVIDINYYSVETSENSNMKHRPIGLGL 666
Query: 525 QGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGI 584
G D +++ S +A + E I Y A+ S+++AA+ G Y +Y S S+GI
Sbjct: 667 MGFQDALYKTDISYASEQAVEFADKSMEAISYFAISASTDLAAERGAYSSYEGSLWSQGI 726
Query: 585 LQPDMWNVIPSDR------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
D N++ R DW LR +++ G+RNS ++A PTA+ + I G
Sbjct: 727 FPIDSLNMLVEQRGADYISVNQDSSMDWDALRGKVAQQGMRNSNVMAIAPTATIANITGV 786
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIP 692
++ EP N+Y + LSGEF VVN +L+ DL E G+W + N + Y DGSVQ + IP
Sbjct: 787 SQSIEPTYQNLYVKSNLSGEFTVVNPYLVRDLKERGLWDKVMVNDLKYFDGSVQAVDRIP 846
Query: 693 EELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLK 752
+LK Y T +E++ LVD A R +IDQ+QSLN++++ + KK+ + W GLK
Sbjct: 847 ADLKAKYATAFEVEPRWLVDAASRRQKWIDQAQSLNLYINNASGKKLDVTYRMAWYSGLK 906
Query: 753 TGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
T YYLRS AA K TV+T ++ + CSL + +C AC
Sbjct: 907 T-TYYLRSLAATGTEKSTVNTGQLNAVSQQAAEAAPVQPAPVPKACSLDD-PDCEAC 961
>gi|171318521|ref|ZP_02907673.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria MEX-5]
gi|171096307|gb|EDT41213.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria MEX-5]
Length = 1001
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/774 (40%), Positives = 431/774 (55%), Gaps = 53/774 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
+P + + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 188 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 245 GEEVLQAEMSTRYTEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV W+LF P+ L D +GA+FEK YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 540 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTISVAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 644 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 704 AYHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWTALRAR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 IAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 884 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|390576355|ref|ZP_10256425.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
terrae BS001]
gi|420255797|ref|ZP_14758673.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. BT03]
gi|389931694|gb|EIM93752.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
terrae BS001]
gi|398044510|gb|EJL37328.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. BT03]
Length = 997
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/760 (40%), Positives = 426/760 (56%), Gaps = 49/760 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKD 100
+Y GV +Q+ + A A M P Y+ + ARI + + + T+ E +
Sbjct: 195 LYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEDEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + +R G+ A L+ + + + +K A LD+ +RD + Y G +TL Y L
Sbjct: 255 YFPLFIKR-GVNAELLDEKLLQFDLKRLGAALDA----NRDLQFGYLGLQTLYDRYFLHS 309
Query: 160 QGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLS
Sbjct: 310 DGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLS 369
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L
Sbjct: 370 SCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFL 428
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PD
Sbjct: 429 KVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPD 487
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWF 391
LFM+RV G W+LF P+ L D +GA+FEK YT YE E K K + A LW
Sbjct: 488 LFMKRVHEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEEKAARGEIKLFKKIPAAQLWR 547
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L
Sbjct: 548 KMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL 607
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
++E+ D +KL ++ L+ +ID+NYY V AR
Sbjct: 608 VAHLKEQ---------------ADGTVVLDHDKLKRTISVAMRMLDNVIDINYYAVAKAR 652
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SNL+HRP+G+G+ G D +L + S EA + E + Y+A S+E+A + G
Sbjct: 653 NSNLKHRPVGMGIMGFQDCLHVLRTPYASQEAVEFADRSMEAVCYYAYWASTELAEERGR 712
Query: 572 YETYHNSPVSKGILQPDMWNVI-----------PSDRWDWGVLRDMISKNGVRNSLLVAP 620
Y TY S +GIL D ++ S+ DW LR IS +G+RNS VA
Sbjct: 713 YATYRGSLWDRGILPQDTLKLLEEARGGYIEVDSSESMDWASLRSRISTHGMRNSNCVAI 772
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G+W + + Y
Sbjct: 773 APTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKY 832
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
DGS+ +I +P +L+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 833 FDGSLSRIDRVPGDLRAIYATAFEVDATWLVEAASRRQKWIDQAQSLNIYMAGASGKKLD 892
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
++ W RGLKT YYLR+ AA K TV P
Sbjct: 893 EVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 931
>gi|254253305|ref|ZP_04946623.1| Ribonucleotide reductase alpha subunit [Burkholderia dolosa AUO158]
gi|124895914|gb|EAY69794.1| Ribonucleotide reductase alpha subunit [Burkholderia dolosa AUO158]
Length = 997
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 430/774 (55%), Gaps = 53/774 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
+P + + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 188 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E R G++A L+ D + + +K L + +RD + Y
Sbjct: 245 GEEVVQSEMSTRYAEYFPQFLRRGVEAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV W+LF P+ L D +GAEFE YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEEKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVKQPD-----------GSYA-----LDHDKLKRTISVAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+
Sbjct: 644 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 704 AYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDMSETLDWAALRAR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 IATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RG KT YYLR+ AA K TV P
Sbjct: 884 LNIYMAGASGKKLDEVYKLAWLRGKKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|365857691|ref|ZP_09397679.1| ribonucleoside-diphosphate reductase, alpha subunit
[Acetobacteraceae bacterium AT-5844]
gi|363715878|gb|EHL99300.1| ribonucleoside-diphosphate reductase, alpha subunit
[Acetobacteraceae bacterium AT-5844]
Length = 947
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/815 (38%), Positives = 454/815 (55%), Gaps = 64/815 (7%)
Query: 28 GLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIA----- 82
GL+ +PVL + +Y G+++ +L + A + P+YA ++AR+
Sbjct: 163 GLADVFPEPVLTEAR--RNLYDGISSEELSQALILAARTLIEQEPNYAYVSARLLLAVAR 220
Query: 83 ------VSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEII 136
V + T+ + D + Y + G++A L+ ++ + A L + +
Sbjct: 221 REATGFVQGIAVQTQAEMATAYPDYFTAYVGK-GIEAQLLNPELARF---DLARLGAALK 276
Query: 137 YDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMM 193
+RD + Y GF+TL YLL+ QG E PQ MRV++G+ ++ID AI+ Y ++
Sbjct: 277 PERDLQFQYLGFQTLYDRYLLQTQGVRFEMPQAFFMRVAMGLALNEIDREERAIEFYDLI 336
Query: 194 SQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVH 253
S F ++PTLFN+GT QLSSCFL + DD ++GI+ +K+ A+++K +GGIG S
Sbjct: 337 SSFDFMCSTPTLFNSGTRHSQLSSCFLTSVPDD-LDGIFGAIKDNALLAKYSGGIGNSWT 395
Query: 254 NIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLN 313
+R G++IRGTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH D+ EFL+
Sbjct: 396 RVRGLGAHIRGTNGQSQGVVPFLKVANDTAIAVNQGG-KRKGAVCAYLETWHIDVEEFLD 454
Query: 314 LKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTH 373
L+KN G + R D+ A WVPDLFM+RV+ +G+W+LF P+E L + +G F++ Y
Sbjct: 455 LRKNTGDDRRRTHDMNTANWVPDLFMQRVEADGEWTLFSPDEVPDLHNLYGIPFKEAYER 514
Query: 374 YEREGKA-----KKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNL 428
YE + KA K V+A +LW +LT ETG P+M FKD CN +S Q++ G + SSNL
Sbjct: 515 YEAKAKAGEIKVHKTVRAVDLWRRMLTMLFETGHPWMTFKDPCNLRSPQRHAGVVHSSNL 574
Query: 429 CTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEV 488
CTEI TS +E AVCNL SI L R V EK + D E+LA
Sbjct: 575 CTEITLNTSDSEVAVCNLGSINLGRHVTEKGL--------------------DRERLART 614
Query: 489 TAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNK 548
L+ +IDVN+Y + ARRSNLRHRPIG+G+ G D L + S EA +
Sbjct: 615 VRTAMRMLDNVIDVNFYTIPQARRSNLRHRPIGMGLMGFQDALHALRLPLASEEAVRFAD 674
Query: 549 DIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR---------WD 599
+ E I Y+A++ S ++AA+ G Y ++ S S+G+L D + R D
Sbjct: 675 ESMEVISYYAIEASVDLAAERGAYASFQGSLWSQGVLPVDSIRYVAEARGETLDQSTTMD 734
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ + G+RNS +A PTA+ S I+G + EP N+Y + +SG+F VVN
Sbjct: 735 WESLRERVKTIGMRNSNTMAIAPTATISNIVGATQSIEPTFRNLYVKANMSGDFTVVNPA 794
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL G+W + + + Y DGS+ I IP++LK +Y T +E+ LV+ A R
Sbjct: 795 LVADLKARGLWDAVMVSDLKYYDGSLGPIDRIPDDLKDLYATAFEVDASWLVEAAARRQK 854
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS----- 774
+IDQ+QSLN+++ PN +K+ +L+ W RGLKT YYLR+++A K T+ S
Sbjct: 855 WIDQAQSLNLYLANPNGRKLDALYRLAWKRGLKT-TYYLRTQSATHVEKSTLKKSDGKLN 913
Query: 775 VFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
K P+ PE + A VC L + C AC
Sbjct: 914 AVKVAPQ-PESAFEATPLDAPKVCMLDD-PTCEAC 946
>gi|385208004|ref|ZP_10034872.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. Ch1-1]
gi|385180342|gb|EIF29618.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. Ch1-1]
Length = 1001
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 306/764 (40%), Positives = 429/764 (56%), Gaps = 51/764 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN---- 89
DP++ + +Y GV SQ+ + A A M P Y+ + ARI + + +
Sbjct: 184 ADPIIA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEE 241
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYF 146
T+ E + + + +R G++A L+ D + + +K A LD+ +RD + Y
Sbjct: 242 EVTQTEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKRLGAALDN----NRDLQFGYL 296
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 297 GLQTLYDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSTFDFMSSTP 356
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 357 TLFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 415
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 416 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 474
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ L D +GAEFEK YT YE E
Sbjct: 475 RTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEKAYTAYEDKVARGEI 534
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 535 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 594
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
E AVCNL S+ L ++E+ D +KL ++ L+
Sbjct: 595 AEIAVCNLGSVNLVAHLKEQ---------------ADGTLVLDHDKLKRTVSVAMRMLDN 639
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S EA + E + Y+A
Sbjct: 640 VIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYA 699
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMI 607
S+E+A + G Y +Y S +GIL D ++ S+ DW LR I
Sbjct: 700 YYASTELAQERGRYSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRI 759
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 760 ATYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKAR 819
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W + + Y DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QSL
Sbjct: 820 GLWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSL 879
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + KK+ ++ W RGLKT YYLR+ AA K TV
Sbjct: 880 NIYMGGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTV 922
>gi|377821696|ref|YP_004978067.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. YI23]
gi|357936531|gb|AET90090.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. YI23]
Length = 1001
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 308/774 (39%), Positives = 433/774 (55%), Gaps = 53/774 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN---- 89
DP++ + +Y GV SQ+ + A A M P Y+ + +RI + + +
Sbjct: 190 ADPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRILLHTIRREILEG 247
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYF 146
T+ E + + + +R G++A L+ D + + +K A LD+ +RD + Y
Sbjct: 248 EVTQAEMGERYAEYFPLFIKR-GVEAGLLDDKLQQFDLKRLGAALDA----NRDLQFGYL 302
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 303 GLQTLYDRYFLHVEGTRIELPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 362
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 363 TLFNSGTHRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 421
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 422 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 480
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ L D +GA+FEK Y YE E
Sbjct: 481 RTHDMNTANWIPDLFMKRVVEGGDWTLFSPSTCPDLHDLFGADFEKAYVAYEEKAARGEI 540
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 541 KLFKKLPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSE 600
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
TE AVCNL S+ L V++ D D KL ++ L+
Sbjct: 601 TEIAVCNLGSVNLVAHMVKQAD----------------GTYALDHAKLKRTISVAMRMLD 644
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S +A + E + Y+
Sbjct: 645 NVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASGDAVEFADRSMEAVCYY 704
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y TY S +GIL D ++ S+ DW LR
Sbjct: 705 AYYASTELAEERGRYATYRGSLWDRGILPQDSLKLLADARGGYVEVDSSESMDWPALRSR 764
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
IS+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 765 ISQYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKA 824
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + + Y DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 825 RGLWDEVMVSDLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQS 884
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 885 LNIYMAGASGKKLDEVYKLAWIRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 937
>gi|187925408|ref|YP_001897050.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
phytofirmans PsJN]
gi|187716602|gb|ACD17826.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
phytofirmans PsJN]
Length = 1001
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 305/764 (39%), Positives = 429/764 (56%), Gaps = 51/764 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN---- 89
DP++ + +Y GV SQ+ + A A M P Y+ + ARI + + +
Sbjct: 184 ADPIIA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILKE 241
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYF 146
T+ E + + + +R G++A L+ D + + +K A LD+ +RD + Y
Sbjct: 242 EVTQTEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKRLGAALDN----NRDLQFGYL 296
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 297 GLQTLYDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 356
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 357 TLFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 415
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 416 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 474
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ L D +GA+FEK YT YE E
Sbjct: 475 RTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEDKVARGEI 534
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 535 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 594
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
E AVCNL S+ L ++E+ D +KL ++ L+
Sbjct: 595 AEIAVCNLGSVNLVAHLKEQ---------------ADGTLVLDHDKLKRTVSVAMRMLDN 639
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S EA + E + Y+A
Sbjct: 640 VIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYA 699
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMI 607
S+E+A + G Y +Y S +GIL D ++ S+ DW LR I
Sbjct: 700 YYASTELAQERGRYSSYRGSLWDRGILPQDSVKLLADARGGYVEVDSSESMDWTELRSRI 759
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 760 ATYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKAR 819
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W + + Y DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QSL
Sbjct: 820 GLWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSL 879
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + KK+ ++ W RGLKT YYLR+ AA K TV
Sbjct: 880 NIYMGGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTV 922
>gi|167580511|ref|ZP_02373385.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis TXDOH]
Length = 950
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 316/805 (39%), Positives = 437/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + A
Sbjct: 157 VTDNGVMRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSAILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMSTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLYKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL F S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPFASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|167920555|ref|ZP_02507646.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei BCC215]
Length = 952
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 315/805 (39%), Positives = 437/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL + S EA + E + YHA S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPYASDEAVEFADRSMEAVCYHAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|91785258|ref|YP_560464.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
xenovorans LB400]
gi|91689212|gb|ABE32412.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
LB400]
Length = 1001
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 305/764 (39%), Positives = 429/764 (56%), Gaps = 51/764 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN---- 89
DP++ + +Y GV SQ+ + A A M P Y+ + ARI + + +
Sbjct: 184 ADPIIA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEE 241
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYF 146
T+ E + + + +R G++A L+ D + + +K A LD+ +RD + Y
Sbjct: 242 EVTQTEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKRLGAALDN----NRDLQFGYL 296
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 297 GLQTLYDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSTFDFMSSTP 356
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 357 TLFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 415
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 416 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 474
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ L D +GAEFE YT YE E
Sbjct: 475 RTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFETAYTAYEDKVARGEI 534
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 535 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 594
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
E AVCNL S+ L ++E+ D +KL ++ L+
Sbjct: 595 AEIAVCNLGSVNLVAHLKEQ---------------ADGTLVLDHDKLKRTVSVAMRMLDN 639
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S EA + E + Y+A
Sbjct: 640 VIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVRFADTSMEAVCYYA 699
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMI 607
S+E+A + G Y +Y S +GIL D ++ S+ DW LR I
Sbjct: 700 YYASTELAQERGRYSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRI 759
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
++ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 760 AQYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKAR 819
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W + + Y DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QSL
Sbjct: 820 GLWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSL 879
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + KK+ ++ W RGLKT YYLR+ AA K TV
Sbjct: 880 NIYMGGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTV 922
>gi|388566435|ref|ZP_10152880.1| ribonucleotide-diphosphate reductase subunit alpha [Hydrogenophaga
sp. PBC]
gi|388266449|gb|EIK91994.1| ribonucleotide-diphosphate reductase subunit alpha [Hydrogenophaga
sp. PBC]
Length = 966
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/790 (38%), Positives = 445/790 (56%), Gaps = 53/790 (6%)
Query: 8 GRQEAVHFDKITARLKKLSYGLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
G++ + D +T + GL + DP++ K +Y GV ++ + A A
Sbjct: 155 GQRVPLDIDALTRLITDACAGLGADVKADPIVAETK--RNLYDGVPIDEVYKAAILAART 212
Query: 67 MTTNHPDYASLAARIAVSNLHKNT------KKSFSETIKDMYNHYNERSGLKAPLIADDI 120
+ PDY AR+ + + + + + D + + ++ G+ A L+ D+
Sbjct: 213 LIEKDPDYTYATARLLLHTIVREILGAEVPQAEMGQRYADYFPQFIQK-GVDAELLNPDM 271
Query: 121 YEI-IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH 179
+ + + A L E RD +DY G +TL Y L V+ +E PQ MRV++G+
Sbjct: 272 LQFDLTRLGAALKPE----RDLQFDYLGLQTLYDRYFLHVRKSRIELPQAFFMRVAMGLS 327
Query: 180 KDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
++ID AI+ Y ++S F ++PTLFN+GT R QLSSC+L + DD ++GIYE++K
Sbjct: 328 LNEIDREARAIEFYEILSTFDFMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LDGIYESIK 386
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
E A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 387 ENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGA 445
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV G+WSLF P+
Sbjct: 446 VCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVLEKGEWSLFSPSNT 505
Query: 357 SGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTC 411
L D +G +FEK Y YE E K + V A +LW ++L+ ETG P++ FKD C
Sbjct: 506 PDLHDKFGTDFEKAYVAYEEKAARGEIKPYRKVPASDLWRKMLSMLFETGHPWITFKDAC 565
Query: 412 NRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVG 471
N +S QQ+ G + SSNLCTEI TS TETAVCNL S+ L R +++
Sbjct: 566 NVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLRHLKD-------------- 611
Query: 472 SRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
G + D EKL + A L+ +ID+NYY V+ AR SNLRHRP+G+GV G D
Sbjct: 612 --GENGKVLDHEKLKKTIATAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGVMGFQDAL 669
Query: 532 ILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN 591
L + + S EA + E + Y+A S+E++ + G Y ++ S KGIL PD +
Sbjct: 670 YELRVPYASNEAVEFADRSMEAVCYYAYWASTELSKERGRYSSFKGSLWDKGILPPDTLD 729
Query: 592 VIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
++ +R DW LR I+++G+RNS VA PTA+ S I+G + EP
Sbjct: 730 LLAKERGGYVDVDRSSSLDWDALRQKIARDGMRNSNCVAIAPTATISNIIGVDASIEPCF 789
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYK 700
N+ + LSGEF V+N +L+ DL +G+W + + + DGS++ I +P+++K +Y
Sbjct: 790 GNLSVKSNLSGEFTVINGYLVKDLKRLGLWDDVMVMDLKHFDGSLRPIDRVPQDVKALYA 849
Query: 701 TVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRS 760
T +E++ + LV+ A R +IDQ+QSLNI+M + KK+ + W RGLKT YYLR+
Sbjct: 850 TAFEVEPVWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYYLRT 908
Query: 761 RAAADAIKFT 770
+A K T
Sbjct: 909 TSATQIEKST 918
>gi|85714831|ref|ZP_01045817.1| ribonucleotide-diphosphate reductase alpha subunit [Nitrobacter sp.
Nb-311A]
gi|85698317|gb|EAQ36188.1| ribonucleotide-diphosphate reductase alpha subunit [Nitrobacter sp.
Nb-311A]
Length = 956
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/757 (40%), Positives = 423/757 (55%), Gaps = 60/757 (7%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------------TKKSF 94
+Y G++ +L A + PDYA +AR+ + L + T+
Sbjct: 182 LYDGISVDELALAPILAARTLVETDPDYAKASARLLLDKLRREALSFVSGRSEQATQAEM 241
Query: 95 SETIKDMYNHYNERSGLKAPLIADDIYEIIM-KNAACLDSEIIYDRDFDYDYFGFKTLER 153
+E D + Y R+G+ L+ +I + + AA L E RD +DY G +TL
Sbjct: 242 AERYADYFRAY-VRTGIDNELLDLEIGRFDLDRLAAALKPE----RDLRFDYLGLQTLYD 296
Query: 154 SYLLKVQGKVVERPQHMLMRVSIGIHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGT 210
Y L V+G E PQ MRV+ G+ +ID AI Y ++S F ++PTLFNAGT
Sbjct: 297 RYFLHVRGVRFELPQAFFMRVACGLALREIDREEKAIAFYDLLSSFDFMASTPTLFNAGT 356
Query: 211 PRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSN 270
RPQLSSCFL + DD ++GI++ +K+ A++SK AGG+G +R G++I+GTNG S
Sbjct: 357 LRPQLSSCFLTTVADD-LDGIFKAIKDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGESQ 415
Query: 271 GIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFY 330
G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+L+KN G + R D+
Sbjct: 416 GVVPFLKVANDTAIAVNQGG-KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNT 474
Query: 331 ALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQ 385
A WVPDLFM RV+ +G W+LF P+E L D G F + Y YE E + K V+
Sbjct: 475 ANWVPDLFMRRVEEDGMWTLFSPDETPDLHDLTGKAFTERYACYEEKAARGELRVTKQVR 534
Query: 386 AQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCN 445
A +LW +LT ETG P++ FKD CN +S QQ+ G + SSNLCTEI TS TE AVCN
Sbjct: 535 AVDLWRRMLTMLFETGHPWITFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSNTEVAVCN 594
Query: 446 LASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYY 505
L S+ L +++ + D E LA I L+ ++DVN+Y
Sbjct: 595 LGSVNLVSHIKDGKL--------------------DHEHLARTVRIAMRMLDNVLDVNFY 634
Query: 506 PVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEI 565
+ AR SNLRHRP+G+GV G D +L + + S A + E I Y+A+ S E+
Sbjct: 635 TIPEARTSNLRHRPVGLGVMGFQDALNILRLPYASNGAVSFADESMEAIAYYAISGSVEL 694
Query: 566 AAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRN 614
AA+ G Y +Y S SKGIL D ++ S R DW LR+ + G+RN
Sbjct: 695 AAERGRYPSYQGSLWSKGILPLDSLTLVDEARGAAVDIDRSSRLDWDSLRESVMTIGMRN 754
Query: 615 SLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTI 674
S +A PTA+ S I G ++ EP N+Y + +SG+F VVN HL+ DL G+W +
Sbjct: 755 SNCMAIAPTATISNICGVSQSIEPAYQNLYVKSNMSGDFTVVNAHLVRDLKARGLWDEVM 814
Query: 675 KNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQP 734
+ + Y DGSV +I +P++LK +Y T +EI L+D A R +IDQ+QSLN+++ P
Sbjct: 815 ISDLKYFDGSVGQIDRVPDDLKALYATAFEIDSSWLIDAAARRQKWIDQAQSLNLYIANP 874
Query: 735 NFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
+ KK+ +L+ W RGLKT YYLRSR+A K T+
Sbjct: 875 SGKKLDALYRHAWKRGLKT-TYYLRSRSATHVEKSTL 910
>gi|167618619|ref|ZP_02387250.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis Bt4]
Length = 953
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 315/805 (39%), Positives = 437/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + A
Sbjct: 157 VTDNGVMRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSAILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMSTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLYKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|83719828|ref|YP_441700.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis E264]
gi|257137869|ref|ZP_05586131.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis E264]
gi|83653653|gb|ABC37716.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
thailandensis E264]
Length = 995
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 315/805 (39%), Positives = 437/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + A
Sbjct: 157 VTDNGVMRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSAILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMSTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLYKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|402567672|ref|YP_006617017.1| ribonucleotide reductase subunit alpha [Burkholderia cepacia GG4]
gi|402248869|gb|AFQ49323.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Burkholderia cepacia GG4]
Length = 997
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/775 (40%), Positives = 432/775 (55%), Gaps = 57/775 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + +RI LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDY 145
E + +M Y E + G+ A L+ D + + + + LD+ +RD + Y
Sbjct: 245 GEEVVQSEMSARYAEYFPQFLKRGVDAGLLDDKLLQFDLTRLGEALDA----NRDLQFGY 300
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L V+G +E PQ MRV++G+ ++ID AI+ Y+++S F ++
Sbjct: 301 LGLQTLYDRYFLHVEGSRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSST 360
Query: 203 PTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I
Sbjct: 361 PTLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHI 419
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 420 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDR 478
Query: 323 HRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----E 377
R D+ A W+PDLFM+RV W+LF P+ L D +GAEFE YT YE E
Sbjct: 479 RRTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGE 538
Query: 378 GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTS 437
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 539 IKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTS 598
Query: 438 PTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENL 496
TE AVCNL S+ L V++ D GS D +KL + L
Sbjct: 599 DTEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLQRTIRVAMRML 642
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYY 556
+ +ID+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y
Sbjct: 643 DNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCY 702
Query: 557 HALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRD 605
+A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 703 YAYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSEALDWTSLRS 762
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL
Sbjct: 763 RIAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLK 822
Query: 666 EMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQ 725
E G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+Q
Sbjct: 823 ERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQ 882
Query: 726 SLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
SLNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 883 SLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|282890381|ref|ZP_06298909.1| hypothetical protein pah_c016o113 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499763|gb|EFB42054.1| hypothetical protein pah_c016o113 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 921
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 314/842 (37%), Positives = 482/842 (57%), Gaps = 63/842 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV DG + ++ K+ ++++ E C+P + +++ +Y GV +L+E A
Sbjct: 109 LYVTYPDGTKSPLNTQKMQSKMEHACADFK-ELCNPQELIEEMLKHLYDGVLFKELNESA 167
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF---SETIKDMYNHYNE--RSGLKAPL 115
+A + P Y +AAR+ + +++ + SE +H+ + R G+ A
Sbjct: 168 IFSARSKIEKEPAYNYVAARLLLQDIYNEVFEQECHPSEVANLHVSHFEQYIRKGVMAKR 227
Query: 116 IADDIYEI-IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
+ +++ + K A LDS RD + Y G +TL YL+ V+ +E PQ+ MRV
Sbjct: 228 LTPELFGYDLEKLAQNLDS----SRDKLFTYIGVQTLYDRYLIHVKNDRIETPQYFWMRV 283
Query: 175 SIGIHKDDIDS----AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
++G+ ++ ++ AI+ Y+++SQ F ++PTLFN+G+ PQLSSC+L ++DD +
Sbjct: 284 AMGLALNEKENREERAIEFYNVLSQFHFISSTPTLFNSGSLHPQLSSCYLSTVQDDLV-N 342
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I++ + + A +SK +GGIG NIRATG+ I GTNG + G+VP L+V NDTA V+QGG
Sbjct: 343 IFKVIADNASLSKWSGGIGNDWTNIRATGATIHGTNGLTQGVVPFLKVANDTAVAVNQGG 402
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KRKGA YLE WH DI +F+ L+KN G E R D+ A W+PDLFM+RV+ W+L
Sbjct: 403 -KRKGAVCAYLETWHLDIEDFVELRKNTGDERRRTHDMNTANWIPDLFMKRVREQSVWTL 461
Query: 351 FCPNEASGLADCWGAEFEKLYTHYER---EGKAK--KVVQAQNLWFEILTSQIETGTPYM 405
F P++ L D +G EFEK Y YER EGK K KV+ A +LW +++T ETG P+M
Sbjct: 462 FNPSDTPDLHDLYGIEFEKRYCEYERLAQEGKIKLFKVIPAMDLWRKMITMLFETGHPWM 521
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
FKD N +S Q + G + SSNLCTEI+ TS ETAVCNL SI L +
Sbjct: 522 TFKDPSNIRSPQSHAGVVHSSNLCTEILLNTSENETAVCNLGSINLAAHI---------- 571
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
K F D + LA+ L+ +ID+NYYP + AR SNLRHRP+G+G+
Sbjct: 572 ----------KGDFLDEQFLAKTIRTAMRMLDNVIDINYYPTKEARESNLRHRPVGLGLM 621
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
G D +A++S EA + E I YHA+ S+E+A + G Y +Y S S+GIL
Sbjct: 622 GFQDALYHFRIAYDSQEAVEFADASMEMISYHAILASTELAKERGVYSSYRGSKWSQGIL 681
Query: 586 QPDMWNVIPSDRW-----------DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
D ++ ++R DW V+R I K+G+RN +A PTA+ + I G ++
Sbjct: 682 PIDSIALLDNERKGYLHMDRTSKKDWSVVRKEIQKHGMRNCNTMAIAPTATIAHISGLSQ 741
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
EP S +Y + LSGEF V+N+ L+ DL E +W+ + +++ Y DGSVQ+I + PE+
Sbjct: 742 SIEPTFSLLYVKSNLSGEFAVLNEWLVKDLKERDLWNQDMLDELKYYDGSVQEIEQFPED 801
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
LK +YKT +EI+ L++ A R +ID QSLN++++ P+ +K++ ++ W +GLKT
Sbjct: 802 LKGLYKTAFEIEPKWLIECASRRQKWIDMGQSLNLYVNAPDGRKLSDMYLLAWEKGLKT- 860
Query: 755 MYYLRSRAAADAIKFTVDTSV-------FKEKPEKPELVVDDETKMAQVVCSLTNREECM 807
YYLRS+AA K T+D + K + + V+ ++ + + CSL+ +EC
Sbjct: 861 TYYLRSKAATQVEKSTLDINKKGIQPRWMKSRSASGSIRVERDSSIPK-SCSLSG-DECE 918
Query: 808 AC 809
+C
Sbjct: 919 SC 920
>gi|406942476|gb|EKD74701.1| hypothetical protein ACD_44C00359G0004 [uncultured bacterium]
Length = 939
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 305/810 (37%), Positives = 445/810 (54%), Gaps = 64/810 (7%)
Query: 30 STEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHK- 88
+ E DP L++++ +++G + + L + +A AM P+Y +AAR+ ++ L
Sbjct: 163 TLESVDPQLITKEAQRNLFQGASLTDLKKALQLSAKAMIEKEPNYGYVAARLLLAELRSE 222
Query: 89 ----------NTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYD 138
N+ +E ++H+ R G+ L+ + +K L + ++ D
Sbjct: 223 ALEFLQLPSINSSADMAEAYPRYFDHFIHR-GIDVELLDPRLANFNLKK---LGAALLAD 278
Query: 139 RDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI---HKDDIDSAIKTYHMMSQ 195
RD ++Y G +TL Y L G E PQ MRV++G+ +D + AI+ Y ++S
Sbjct: 279 RDLKFNYLGLQTLYDRYFLHHHGTHFELPQAFFMRVAMGLAMNEEDKENRAIEFYLLLSS 338
Query: 196 RWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNI 255
+ ++PTLFN+GT RPQLSSCFL + DD ++ IY +K+ A++SK AGG+G +
Sbjct: 339 FDYMSSTPTLFNSGTLRPQLSSCFLSTVPDD-LDSIYGAIKDNALLSKFAGGLGNDWTPV 397
Query: 256 RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLK 315
RA GS+I+GTNG S G+VP L V N +A V+QGG KR+GA YLE WH DI EFL L+
Sbjct: 398 RAMGSHIKGTNGKSQGVVPFLNVANASAVAVNQGG-KRQGAVCAYLETWHLDIEEFLELR 456
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYE 375
KN G + R D+ A W+PDLFM+RV NGQW+LF P+E L D +GAEFEK+Y YE
Sbjct: 457 KNTGDDRRRTHDMNTANWIPDLFMKRVHENGQWTLFSPSETPELHDLYGAEFEKVYIEYE 516
Query: 376 R-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCT 430
E + K + A +LW ++L+ ETG P++ FKD CN +S QQ+ G I SSNLCT
Sbjct: 517 NKAARCELRQYKTIPAISLWRKMLSMLFETGHPWITFKDPCNLRSPQQHTGVIHSSNLCT 576
Query: 431 EIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTA 490
EI TS E AVCNL SI L + +K + + EKL +
Sbjct: 577 EITLNTSQDEIAVCNLGSINLSTHITDKGL--------------------NIEKLEKTVR 616
Query: 491 IVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDI 550
L+ +ID+NYY V ARRSNL+HRPIG+G+ G D+ L + + S A +
Sbjct: 617 TAIRMLDNVIDMNYYAVPQARRSNLKHRPIGLGLMGFQDSLYQLHIPYSSDMAVEFADRS 676
Query: 551 FETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WD 599
E I Y A+K S+E+A + G Y ++ S SKGIL D ++ +R D
Sbjct: 677 MEYISYFAIKASNELAKERGSYASFEGSLWSKGILPIDSLELLQKERKQYLQLNKEKNLD 736
Query: 600 WGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I G+RNS +A PTA+ S I G ++ EP N++ + LSGEF V+N +
Sbjct: 737 WETLRIAIRTTGMRNSNTMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGEFTVINPY 796
Query: 660 LLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGC 719
L+ DL + +W + N + Y +GS+ K+ +P ELK +Y T +EI + L++ A R
Sbjct: 797 LVADLKALNLWDDVMINDLKYFNGSLNKLTRVPTELKQLYATAFEIDPLWLIEAAARRQK 856
Query: 720 YIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEK 779
+IDQ QSLN+++ Q + KK+ +L+ W RGLKT YYLR+ A +A K T+
Sbjct: 857 WIDQGQSLNLYLAQASGKKLDTLYRFAWLRGLKT-TYYLRTLGATNAEKSTIHDHALNAV 915
Query: 780 PEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ VCS+ N +C AC
Sbjct: 916 TTVATDTTAAK------VCSI-NDPDCEAC 938
>gi|332526549|ref|ZP_08402661.1| ribonucleotide-diphosphate reductase subunit alpha [Rubrivivax
benzoatilyticus JA2]
gi|332110817|gb|EGJ10994.1| ribonucleotide-diphosphate reductase subunit alpha [Rubrivivax
benzoatilyticus JA2]
Length = 950
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/829 (37%), Positives = 456/829 (55%), Gaps = 56/829 (6%)
Query: 8 GRQEAVHFDKITARLKKLSYGLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
G++ + D + + +++ GL + +P+L + +Y GV ++ + A +
Sbjct: 150 GQRLPLDLDALRSLVEQACAGLGEDVRAEPILAETR--RNLYDGVPLDEVYKAAILASRT 207
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKS--FSETIKDMYNHYNE---RSGLKAPLIADDIY 121
+ P Y AR+ + + + + E + Y Y R G++A L+ +++
Sbjct: 208 LIEKDPAYTRATARLLLHTIRREILGADVRPEAMAARYAEYFPAYVRQGVQAELLDEELQ 267
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+ A L + + +RD +DY G +TL Y L V G+ +E PQ MRV++G+ +
Sbjct: 268 RF---DLARLGAALKPERDLQFDYLGLQTLYDRYFLHVDGRRIELPQAFFMRVAMGLALN 324
Query: 182 DIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
+ID AI+ Y ++S F ++PTLFN+GT R QLSSC+L + DD +EGIYE LKE
Sbjct: 325 EIDREARAIEFYDVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKEN 383
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 384 ALLSKFAGGLGNDWTPVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVC 442
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV G W+LF P+
Sbjct: 443 AYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSSCPD 502
Query: 359 LADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNR 413
L D +GA FE+ Y YER E + K + A++LW ++LT ETG P++ FKD CN
Sbjct: 503 LHDKFGAAFEQAYVAYERKADRGEIRPFKRLPARDLWRKMLTMLFETGHPWITFKDACNL 562
Query: 414 KSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSR 473
+S QQ++G + SSNLCTEI TS E AVCNL SI L + V +
Sbjct: 563 RSPQQHVGVVHSSNLCTEITLNTSAGEIAVCNLGSINLAQHVAGGGI------------- 609
Query: 474 GSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
D KL + L+ +ID+NYY V+ AR +NLRHRP+G+G+ G D
Sbjct: 610 -------DQAKLKRTVSTAMRMLDNVIDINYYAVKKARDANLRHRPVGLGLMGFQDCLYQ 662
Query: 534 LGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVI 593
L + + S A + E + YHA SSE+A + G Y +Y S +G+L D +++
Sbjct: 663 LRLPYASDAAVEFADRSMEALCYHAYWASSELAEERGRYSSYRGSLWDRGVLPQDTLDLL 722
Query: 594 PSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
++R DW LR I+ +G+RNS VA PTA+ S I+G + EP N
Sbjct: 723 AAERGGHVEVDRSETLDWAALRARIAVHGMRNSNCVAIAPTATISNIIGVDASIEPCFGN 782
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTV 702
+ + LSGEF VVN++L+ DL +G+W + + + DGS++ + +P+ELK +Y T
Sbjct: 783 LSVKSNLSGEFTVVNEYLVRDLKRLGLWDDVMVMDLKHFDGSLRAVDRVPDELKQLYATA 842
Query: 703 WEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRA 762
+E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W+RGLKT YYLR+ +
Sbjct: 843 FEVDARWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWTRGLKT-TYYLRTMS 901
Query: 763 AADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVV--CSLTNREECMAC 809
A A K TV P L + A V CS+ N +C AC
Sbjct: 902 ATHAEKSTVAPGAMNAVPRHGGLEAAAAAEPASDVRFCSIDN-PDCEAC 949
>gi|30250347|ref|NP_842417.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrosomonas
europaea ATCC 19718]
gi|30181142|emb|CAD86335.1| Ribonucleotide reductase large subunit [Nitrosomonas europaea ATCC
19718]
Length = 955
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 308/833 (36%), Positives = 462/833 (55%), Gaps = 53/833 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++VV+ +G++ + ++ AR++ L D L+ + + +Y GV ++ + A
Sbjct: 151 LHVVE-NGQKIPLDPAQLMARIESACQNLGNT-VDAALIVKSMLKDLYDGVPAEEVRKSA 208
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAPL 115
+A A+ P Y+ + AR+ + N+ ++ E ++ Y Y R G++A L
Sbjct: 209 ILSARALIEKEPAYSFVTARLLLDNIRYEVLGEEVAHEAMQSRYAEYFPEFVRKGIEAGL 268
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ + + + + A L + DRD + Y G +TL Y L V + +E PQ MRV+
Sbjct: 269 LDERLGQF---DLARLSEALAADRDLQFGYLGLQTLYDRYFLHVSERRIELPQIFFMRVA 325
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ YH++S+ F ++PTLFN+GT R QLSSC+L + D S++GIY
Sbjct: 326 MGLALNEIDREARAIEFYHLLSKFDFMSSTPTLFNSGTRRSQLSSCYLSTVPD-SLDGIY 384
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E +KE A++SK AGG+G +RA G+ I+GTNG S G+VP L+V +DTA V+QGG K
Sbjct: 385 EAIKENALLSKFAGGLGNDWTPVRAMGARIKGTNGKSQGVVPFLKVVSDTAVAVNQGG-K 443
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A+WVPDLFM+R+Q + +W+LF
Sbjct: 444 RKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTAVWVPDLFMKRMQEDQEWTLFS 503
Query: 353 PNEASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIETGTPYMLF 407
P++ L D +G FE+ Y YE + ++ + A+ LW ++LT ETG P++ F
Sbjct: 504 PSDTPDLHDKFGRAFEEAYIAYEEQAAQGRLTLFKRIPARQLWRKMLTMLFETGHPWITF 563
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD CN +S Q ++G + SSNLCTEI TS E AVCNL S+ L +
Sbjct: 564 KDPCNIRSPQNHVGVVHSSNLCTEITLNTSEKEIAVCNLGSVNLL--------------A 609
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
IV + D +L + L+ +ID+N+Y V AR +N RHRP+G+G+ G
Sbjct: 610 HIVDGK------LDQARLKQTVTTAMRMLDNVIDINFYAVAKARNANFRHRPVGLGIMGF 663
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D LG+++ SPEA + E + YH S+E+A + G Y TY S +GIL
Sbjct: 664 QDCLHKLGISYASPEAVEFADRSMEAVAYHTYWASTELAEERGTYATYRGSLWDRGILPQ 723
Query: 588 DMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ +R DW LRD I + G+RNS +A PTA+ S I+G +
Sbjct: 724 DTLELLREERGGHVEIDTSSTQDWDALRDRIRQYGMRNSNCLAIAPTATISNIIGVSASI 783
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF VVN+ L++DL + +W + + + DG+V KI +PE L+
Sbjct: 784 EPTYQNLYVKSNLSGEFTVVNQWLVNDLKKQDLWDEVMIADLKHYDGAVSKIDRVPENLR 843
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
+Y T +E+ LV+ A R +IDQ+QSLN++M + KK+ L+ W RGLKT Y
Sbjct: 844 NLYATAFEVDPRWLVEAASRRQKWIDQAQSLNLYMAGASGKKMDELYRLAWLRGLKT-TY 902
Query: 757 YLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
YLR+ A A K TV T P + E + A C++ N EC AC
Sbjct: 903 YLRALGATTAEKSTVHTGTLNAVPAQHEAHAGNLAHSAPQQCAIDN-PECEAC 954
>gi|406834442|ref|ZP_11094036.1| ribonucleoside-diphosphate reductase subunit alpha [Schlesneria
paludicola DSM 18645]
Length = 940
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 308/845 (36%), Positives = 470/845 (55%), Gaps = 66/845 (7%)
Query: 1 MYVVKRDGRQEAVHFD--KITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDE 58
++VV DG + V FD ++ RL++ + GL E D ++ V V+ G++ ++
Sbjct: 125 IHVVLDDGTR--VPFDPRRVEKRLEEAARGLE-EFVDVKSLADDVLRSVFDGISIGEIYR 181
Query: 59 LAAETAAAMTTNHPDYASLAARIAVSNLHKNT------KKSFSETIKDMYNHYNERSGLK 112
A + P + +AAR+ ++ ++K +S + D + HY G++
Sbjct: 182 TQILAARSRIERDPAFDVVAARLMLNVIYKEVLGATPDARSLPKLHHDQFEHY-VIDGIR 240
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
A ++ ++ ++ A + RD + Y G + + YLL V G+ +E PQ+ M
Sbjct: 241 AGRLSPELRRFDLERLA---KAMEPKRDAQFHYLGLQAIYDRYLLHVGGRRIETPQYFWM 297
Query: 173 RVSIGI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
RV++G+ + + AI+ Y M+S FT A+PTLFN+GTP PQLSSC+L + DD +
Sbjct: 298 RVAMGVALQEESREERAIEFYEMLSSFRFTSATPTLFNSGTPHPQLSSCYLSTVSDD-LG 356
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I++ + + AV+SK AGG+G NIRAT ++I GTNG S G++P L+V ND A V+QG
Sbjct: 357 HIFKVIADNAVLSKWAGGLGNDWTNIRATNAHIHGTNGRSQGVIPFLKVVNDAAVAVNQG 416
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G KRKGA YLE WH DI EFL+L+KN G + R D+ A W+PDLFM+RV+ NG W+
Sbjct: 417 G-KRKGAVCSYLETWHLDIEEFLDLRKNTGDDRRRTHDMHTANWIPDLFMKRVRQNGSWT 475
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIETGTPY 404
LF P+E S L D +G FE+ Y YER A ++ V A LW ++LT ETG P+
Sbjct: 476 LFSPDEVSDLHDLYGKAFEERYVEYERLADAGEMLLFRRVSAAELWRKMLTRLFETGHPW 535
Query: 405 MLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVES 464
+ FKD N +S Q ++G + SSNLCTEI+ TS ETAVCNL SI L V + +
Sbjct: 536 ITFKDPSNLRSPQDHVGVVHSSNLCTEILLNTSADETAVCNLGSINLAAHVVDGQL---- 591
Query: 465 HPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
D E+L + L+ +ID+NYYP A SN RHRPIG+G+
Sbjct: 592 ----------------DLERLRATVKVAVRMLDNVIDINYYPTPEAANSNRRHRPIGLGL 635
Query: 525 QGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGI 584
G D L ++F S +A + E I + A+ S+ +AA+ G Y +Y S +G+
Sbjct: 636 MGFQDALCKLRISFASEQAVEFADQSMEAISHAAILASATLAAERGAYGSYAGSKWQRGL 695
Query: 585 LQPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNN 633
L D +++ ++R DW V+R ++++G+RNS ++A PTA+ S I+G +
Sbjct: 696 LPIDTLDLLEAERGEQVPVQREGTLDWNVVRKAVAESGMRNSNVLAIAPTATISTIIGVS 755
Query: 634 ECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPE 693
+ EP ++Y++ LSGEF VN+ L+ +L E+G+W + +++ Y DG++Q I IP
Sbjct: 756 QSIEPAYKHLYAKSNLSGEFTQVNEILVAELKELGLWDAQMLDELKYFDGTLQNIGRIPL 815
Query: 694 ELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKT 753
EL+ + T +EI+ L++ A R +IDQ QSLN++M +PN +K+ ++F W +GLKT
Sbjct: 816 ELRRRFLTAFEIEPKWLIECAARRQKWIDQGQSLNLYMAEPNGRKMQDMYFMAWEKGLKT 875
Query: 754 GMYYLRSRAAADAIKFTVDTSVFKEKPE---------KPELVVDDETKMAQVVCSLTNRE 804
YYLRS AA K T+D + F +P+ E+ DET A +
Sbjct: 876 -TYYLRSLAATQVEKSTLDVNRFGVQPKWMKNRSSSSDIEIERSDETSSAVSAACRLDDP 934
Query: 805 ECMAC 809
C +C
Sbjct: 935 TCESC 939
>gi|238026166|ref|YP_002910397.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
glumae BGR1]
gi|237875360|gb|ACR27693.1| Ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
glumae BGR1]
Length = 999
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 310/775 (40%), Positives = 431/775 (55%), Gaps = 57/775 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 188 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 242
Query: 95 SETIK--DMYNHYNE------RSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDY 145
E + +M Y E + G++A L+ D + + +++ LD+ RD + Y
Sbjct: 243 GEEVSQGEMQARYAEYFPQFLKRGVEAELLDDKLLQFDLVRLGEALDA----GRDLQFGY 298
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L V G +E PQ MRV++G+ ++ID AI+ YH++S F ++
Sbjct: 299 LGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYHVLSSFDFMSST 358
Query: 203 PTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I
Sbjct: 359 PTLFNSGTRRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHI 417
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 418 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 476
Query: 323 HRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----E 377
R D+ A W+PDLFM+RV W+LF P+ L D +GAEFE Y YE E
Sbjct: 477 RRTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYLGYEEKVARGE 536
Query: 378 GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTS 437
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 537 LKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTS 596
Query: 438 PTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENL 496
+E AVCNL S+ L V++ D GS D +KL ++ L
Sbjct: 597 DSEIAVCNLGSVNLVAHLVKQAD-----------GSYA-----LDHDKLKRTVSVAMRML 640
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYY 556
+ +ID+NYY V AR SNL+HRP+G+G+ G D LL F S A + E + Y
Sbjct: 641 DNVIDINYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPFSSDAAVEFADRSMEAVCY 700
Query: 557 HALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRD 605
+A S+E++ + G Y +Y S +GIL D ++ R DW LR+
Sbjct: 701 YAYWASTELSEERGRYSSYRGSLWDRGILPQDTLKLLEEARGGYVEVDMSSSLDWTSLRE 760
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
IS +G+RNS +A PTA+ S I+G + C EP N++ + LSGEF VVN++L+ DL
Sbjct: 761 RISLHGMRNSNCIAIAPTATISNIIGVSPCIEPTFQNLFVKSNLSGEFTVVNEYLVRDLK 820
Query: 666 EMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQ 725
E G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+Q
Sbjct: 821 ERGLWDEVMVADLKYFDGMLSRIDRIPSDLRAIYATAFEVDPKWLVEAASRRQKWIDQAQ 880
Query: 726 SLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
SLNI M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 881 SLNIFMAGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 934
>gi|332530700|ref|ZP_08406631.1| ribonucleotide-diphosphate reductase subunit alpha [Hylemonella
gracilis ATCC 19624]
gi|332039868|gb|EGI76263.1| ribonucleotide-diphosphate reductase subunit alpha [Hylemonella
gracilis ATCC 19624]
Length = 988
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/794 (38%), Positives = 447/794 (56%), Gaps = 55/794 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V +G++ A+ +++ ++ LS + DP++ + +Y GV ++ + A
Sbjct: 156 VTDNGQRVALDLNRLQRLIESACANLSADVKADPIVA--ETLRNLYDGVPLEEVYKAAIL 213
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAPLIA 117
A + PDY AR+ + K + +K Y Y + G+ A L+
Sbjct: 214 AARTLIEKDPDYTYATARLLFHTIAKEVLGRDVQPSEMKQAYADYFPGFIKKGVDAELLN 273
Query: 118 DDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
++ + +K A L SE RD +DY G +TL Y L V+ +E PQ MRV++
Sbjct: 274 PELLQYDLKRLGAALKSE----RDQQFDYLGLQTLYDRYFLHVKKTRIELPQAFFMRVAM 329
Query: 177 GIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ ++ID AI+ Y ++S F ++PTLFN+GT R QLSSC+L + DD ++GIYE
Sbjct: 330 GLALNEIDREARAIEFYEVLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LDGIYE 388
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
++KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 389 SIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KR 447
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM RV G+W+LF P
Sbjct: 448 KGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMRRVMEKGEWTLFSP 507
Query: 354 NEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFK 408
++A L D +G+ FEK Y YE E K K V A +LW ++L+ ETG P++ FK
Sbjct: 508 SDAPDLHDLFGSAFEKAYVAYEAKAKRGELKPSKTVPAIDLWRKMLSMLFETGHPWITFK 567
Query: 409 DTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSR 468
D CN +S QQ+ G + SSNLCTEI TS TETAVCNL S+ L + + + +
Sbjct: 568 DACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLKQHITDGKL-------- 619
Query: 469 IVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
D EKL + + L+ +ID+NYY V+ AR SNLRHRP+G+GV
Sbjct: 620 ------------DHEKLKKTISTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGVMAFQ 667
Query: 529 DTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD 588
D + + + S A Q + E I Y+A S+E+A + G Y +Y S SKGIL PD
Sbjct: 668 DALYEMRIPYASDAAVQFADESMEAICYYAYWASTELARERGVYSSYQGSLWSKGILPPD 727
Query: 589 MWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
++ +R DW +LR I+ +G+RNS VA PTA+ S I+G + E
Sbjct: 728 TLELLARERGGYVEVDRSATLDWELLRKKIAADGMRNSNCVAIAPTATISNIIGVDASIE 787
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+ + LSGEF ++N +L+ DL +G+W + + + DGS+ I +P+++K
Sbjct: 788 PCFGNLSVKSNLSGEFTIINGYLVKDLKRLGLWDEVMVMDLKHFDGSLLPIDRVPQDIKA 847
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
+Y T +E++ LV+ A R +IDQ+QSLNI+M + KK+ + W+RGLKT YY
Sbjct: 848 LYATAFEVEPSWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWTRGLKT-TYY 906
Query: 758 LRSRAAADAIKFTV 771
LR+ +A A K TV
Sbjct: 907 LRTTSATQAEKSTV 920
>gi|167837967|ref|ZP_02464826.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis MSMB43]
Length = 956
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/804 (38%), Positives = 437/804 (54%), Gaps = 52/804 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + +P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVNPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + AR+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARVL---LHTIRREILGEEVTQAEMATRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV G W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L +H
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV-----------AH-- 614
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
+ + D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 615 --LAKQADGTYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 673 QDCLHLLRTPYASGEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVFKEKP 780
YLR+ AA K TV P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|338174004|ref|YP_004650814.1| ribonucleoside-diphosphate reductase subunit alpha [Parachlamydia
acanthamoebae UV-7]
gi|336478362|emb|CCB84960.1| ribonucleoside-diphosphate reductase subunit alpha [Parachlamydia
acanthamoebae UV-7]
Length = 951
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 314/842 (37%), Positives = 482/842 (57%), Gaps = 63/842 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+YV DG + ++ K+ ++++ E C+P + +++ +Y GV +L+E A
Sbjct: 139 LYVTYPDGTKSPLNTQKMQSKMEHACADFK-ELCNPQELIEEMLKHLYDGVLFKELNESA 197
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF---SETIKDMYNHYNE--RSGLKAPL 115
+A + P Y +AAR+ + +++ + SE +H+ + R G+ A
Sbjct: 198 IFSARSKIEKEPAYNYVAARLLLQDIYNEVFEQECHPSEVANLHVSHFEQYIRKGVMAKR 257
Query: 116 IADDIYEI-IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
+ +++ + K A LDS RD + Y G +TL YL+ V+ +E PQ+ MRV
Sbjct: 258 LTPELFGYDLEKLAQNLDS----SRDKLFTYIGVQTLYDRYLIHVKNDRIETPQYFWMRV 313
Query: 175 SIGIHKDDIDS----AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
++G+ ++ ++ AI+ Y+++SQ F ++PTLFN+G+ PQLSSC+L ++DD +
Sbjct: 314 AMGLALNEKENREERAIEFYNVLSQFHFISSTPTLFNSGSLHPQLSSCYLSTVQDDLV-N 372
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I++ + + A +SK +GGIG NIRATG+ I GTNG + G+VP L+V NDTA V+QGG
Sbjct: 373 IFKVIADNASLSKWSGGIGNDWTNIRATGATIHGTNGLTQGVVPFLKVANDTAVAVNQGG 432
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KRKGA YLE WH DI +F+ L+KN G E R D+ A W+PDLFM+RV+ W+L
Sbjct: 433 -KRKGAVCAYLETWHLDIEDFVELRKNTGDERRRTHDMNTANWIPDLFMKRVREQSVWTL 491
Query: 351 FCPNEASGLADCWGAEFEKLYTHYER---EGKAK--KVVQAQNLWFEILTSQIETGTPYM 405
F P++ L D +G EFEK Y YER EGK K KV+ A +LW +++T ETG P+M
Sbjct: 492 FNPSDTPDLHDLYGIEFEKRYCEYERLAQEGKIKLFKVIPAMDLWRKMITMLFETGHPWM 551
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
FKD N +S Q + G + SSNLCTEI+ TS ETAVCNL SI L +
Sbjct: 552 TFKDPSNIRSPQSHAGVVHSSNLCTEILLNTSENETAVCNLGSINLAAHI---------- 601
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
K F D + LA+ L+ +ID+NYYP + AR SNLRHRP+G+G+
Sbjct: 602 ----------KGDFLDEQFLAKTIRTAMRMLDNVIDINYYPTKEARESNLRHRPVGLGLM 651
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
G D +A++S EA + E I YHA+ S+E+A + G Y +Y S S+GIL
Sbjct: 652 GFQDALYHFRIAYDSQEAVEFADASMEMISYHAILASTELAKERGVYSSYRGSKWSQGIL 711
Query: 586 QPDMWNVIPSDRW-----------DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
D ++ ++R DW V+R I K+G+RN +A PTA+ + I G ++
Sbjct: 712 PIDSIALLDNERKGYLHMDRTSKKDWSVVRKEIQKHGMRNCNTMAIAPTATIAHISGLSQ 771
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
EP S +Y + LSGEF V+N+ L+ DL E +W+ + +++ Y DGSVQ+I + PE+
Sbjct: 772 SIEPTFSLLYVKSNLSGEFAVLNEWLVKDLKERDLWNQDMLDELKYYDGSVQEIEQFPED 831
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
LK +YKT +EI+ L++ A R +ID QSLN++++ P+ +K++ ++ W +GLKT
Sbjct: 832 LKGLYKTAFEIEPKWLIECASRRQKWIDMGQSLNLYVNAPDGRKLSDMYLLAWEKGLKT- 890
Query: 755 MYYLRSRAAADAIKFTVDTSV-------FKEKPEKPELVVDDETKMAQVVCSLTNREECM 807
YYLRS+AA K T+D + K + + V+ ++ + + CSL+ +EC
Sbjct: 891 TYYLRSKAATQVEKSTLDINKKGIQPRWMKSRSASGSIRVERDSSIPK-SCSLSG-DECE 948
Query: 808 AC 809
+C
Sbjct: 949 SC 950
>gi|54297687|ref|YP_124056.1| ribonucleotide-diphosphate reductase subunit alpha [Legionella
pneumophila str. Paris]
gi|53751472|emb|CAH12890.1| hypothetical protein lpp1738 [Legionella pneumophila str. Paris]
Length = 942
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 320/845 (37%), Positives = 460/845 (54%), Gaps = 81/845 (9%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + +G + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARI--------AVSNLHKNTKKSFSETIKDM---YNHYNER- 108
+A A+ P+Y ++AR+ A++ L+ ++ +F E + + Y E+
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 109 --SGLKAPLIAD-DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
G+ P +AD D+ + L ++ +RD + Y +TL Y + +G E
Sbjct: 260 IAQGMLDPKMADFDLDK--------LSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYE 311
Query: 166 RPQHMLMRVSIGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL 220
PQ MRV++G+ HK++ AI+ Y ++S + ++PTLFN+GT RPQLSSC+L
Sbjct: 312 LPQAFFMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYL 369
Query: 221 VCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 280
+ D ++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V +
Sbjct: 370 TTVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVAD 428
Query: 281 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFME 340
TA V+QGG KRKGA YLE WH D+ EFL L+KN G + R D+ ALWVPDLFM+
Sbjct: 429 ATAVAVNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMK 487
Query: 341 RVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYE---REG--KAKKVVQAQNLWFEILT 395
RV+ +G W+LF P+E L D +G FE LY YE R+G + K + A LW +L+
Sbjct: 488 RVREDGNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLS 547
Query: 396 SQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
ETG P++ FKD CN +S QQ+ G I SSNLCTEI TS E AVCNL S+ LP +
Sbjct: 548 MLFETGHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSVNLPAHI 607
Query: 456 REKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL 515
KN D +KL + L+ +ID+NYY V AR SNL
Sbjct: 608 --------------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNL 647
Query: 516 RHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETY 575
+HRPIG+G+ G D L M + S EA + E I Y+A++ S ++A + G Y TY
Sbjct: 648 QHRPIGLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTY 707
Query: 576 HNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTA 624
S SKGIL D N++ S + DW LR + G+RNS ++A PTA
Sbjct: 708 EGSLWSKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTA 767
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGS 684
+ S I G ++ EP N+Y + LSGEF VVN +L+ DL + +W + N + Y +GS
Sbjct: 768 TISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKTLNLWDEVMVNDLKYFNGS 827
Query: 685 VQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHF 744
VQ I IPEELK Y T +EI M LV+ A R +IDQ+QSLNI+M QP+ KK+ L+
Sbjct: 828 VQPISRIPEELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYM 887
Query: 745 RTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNRE 804
W RGLKT YYLRS A++A K TV ++D E K CS+T+
Sbjct: 888 HAWIRGLKT-TYYLRSLGASNAEKSTVTDGALNAVK-----LIDTEPK----ACSITD-P 936
Query: 805 ECMAC 809
+C AC
Sbjct: 937 DCEAC 941
>gi|170695323|ref|ZP_02886469.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
graminis C4D1M]
gi|170139723|gb|EDT07905.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
graminis C4D1M]
Length = 1001
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/751 (40%), Positives = 423/751 (56%), Gaps = 49/751 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI + + + T+ E +
Sbjct: 195 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + +R G++A L+ D + + +K A LD+ +RD + Y G +TL Y L
Sbjct: 255 YFPQFIKR-GVQAELLDDKLLQFDLKRLGAALDN----NRDLQFGYLGLQTLYDRYFLHH 309
Query: 160 QGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLS
Sbjct: 310 DGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLS 369
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L
Sbjct: 370 SCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFL 428
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PD
Sbjct: 429 KVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPD 487
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWF 391
LFM+RV G W+LF P+ L D +GAEFE YT YE E K K V A LW
Sbjct: 488 LFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKVPAAQLWR 547
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L
Sbjct: 548 KMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNL 607
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
++E+ D +KL ++ L+ +ID+NYY V AR
Sbjct: 608 VAHLKEQ---------------ADGTLVLDHDKLKRTVSVAMRMLDNVIDINYYAVAKAR 652
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SNL+HRP+G+G+ G D LL + S EA + E + Y+A S+E+A + G
Sbjct: 653 NSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAQERGR 712
Query: 572 YETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAP 620
Y +Y S +GIL D ++ S+ DW LR I+ G+RNS +A
Sbjct: 713 YSSYRGSLWDRGILPQDSVKLLADARGGYVEVDSSESMDWTELRQRIATYGMRNSNCIAI 772
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G+W + + Y
Sbjct: 773 APTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKY 832
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 833 FDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMGGASGKKLD 892
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++ W RGLKT YYLR+ AA K TV
Sbjct: 893 EIYKLAWVRGLKT-TYYLRTMAATHVEKSTV 922
>gi|307731038|ref|YP_003908262.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. CCGE1003]
gi|307585573|gb|ADN58971.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. CCGE1003]
Length = 1000
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 302/751 (40%), Positives = 423/751 (56%), Gaps = 49/751 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI + + + T+ E +
Sbjct: 195 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + +R G++A L+ D + + +K A LD+ +RD + Y G +TL Y L
Sbjct: 255 YFPQFIKR-GVQAELLDDKLLQFDLKRLGAALDA----NRDLQFGYLGLQTLYDRYFLHH 309
Query: 160 QGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLS
Sbjct: 310 DGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLS 369
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L
Sbjct: 370 SCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFL 428
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PD
Sbjct: 429 KVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPD 487
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWF 391
LFM+RV G W+LF P+ L D +GAEFE YT YE E K K + A LW
Sbjct: 488 LFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWR 547
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L
Sbjct: 548 KMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNL 607
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
++E+ D +KL ++ L+ +ID+NYY V AR
Sbjct: 608 VAHLKEQ---------------ADGTLALDHDKLKRTISVAMRMLDNVIDINYYAVAKAR 652
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SNL+HRP+G+G+ G D LL + S EA + E + Y+A S+E+A + G
Sbjct: 653 NSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAEERGR 712
Query: 572 YETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAP 620
Y +Y S +GIL D ++ S+ DW LR I+ G+RNS +A
Sbjct: 713 YSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWSELRQRIATYGMRNSNCIAI 772
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G+W + + Y
Sbjct: 773 APTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKY 832
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 833 FDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLD 892
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++ W RGLKT YYLR+ AA K TV
Sbjct: 893 EIYKLAWVRGLKT-TYYLRTMAATHVEKSTV 922
>gi|323527396|ref|YP_004229549.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. CCGE1001]
gi|323384398|gb|ADX56489.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. CCGE1001]
Length = 1006
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 302/751 (40%), Positives = 423/751 (56%), Gaps = 49/751 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI + + + T+ E +
Sbjct: 195 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + +R G++A L+ D + + +K A LD+ +RD + Y G +TL Y L
Sbjct: 255 YFPQFIKR-GVQAELLDDKLLQFDLKRLGAALDA----NRDLQFGYLGLQTLYDRYFLHH 309
Query: 160 QGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLS
Sbjct: 310 DGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLS 369
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L
Sbjct: 370 SCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFL 428
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PD
Sbjct: 429 KVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPD 487
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWF 391
LFM+RV G W+LF P+ L D +GAEFE YT YE E K K + A LW
Sbjct: 488 LFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWR 547
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L
Sbjct: 548 KMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNL 607
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
++E+ D +KL ++ L+ +ID+NYY V AR
Sbjct: 608 VAHLKEQ---------------ADGTLALDHDKLKRTVSVAMRMLDNVIDINYYAVAKAR 652
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SNL+HRP+G+G+ G D LL + S EA + E + Y+A S+E+A + G
Sbjct: 653 NSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAQERGR 712
Query: 572 YETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAP 620
Y +Y S +GIL D ++ S+ DW LR I+ G+RNS +A
Sbjct: 713 YSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIATYGMRNSNCIAI 772
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G+W + + Y
Sbjct: 773 APTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKY 832
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 833 FDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLD 892
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++ W RGLKT YYLR+ AA K TV
Sbjct: 893 EIYKLAWVRGLKT-TYYLRTMAATHVEKSTV 922
>gi|114332418|ref|YP_748640.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrosomonas
eutropha C91]
gi|114309432|gb|ABI60675.1| ribonucleoside-diphosphate reductase, alpha subunit [Nitrosomonas
eutropha C91]
Length = 957
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 310/835 (37%), Positives = 467/835 (55%), Gaps = 55/835 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+++V+ +G++ + ++TAR++ L + L+ + + +Y GV ++ + A
Sbjct: 151 LHIVE-NGQRIPLDPSRLTARIESACQHLGNV-VNAGLIVKAMLRDLYDGVPAEEVRKSA 208
Query: 61 AETAAAMTTNHPDYASLAARIAVSNL-HKNTKKSFS-ETIKDMYNHYNE---RSGLKAPL 115
+A A+ P Y+ + AR+ + N+ H+ + S E ++ Y Y R G++A L
Sbjct: 209 ILSARALIEKEPAYSFVTARLLLDNIRHEVLGEDVSHEAMQSRYADYFPGFIRQGMEAGL 268
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ + + + + A L +I DRD + Y G +TL Y L + + +E PQ MRV+
Sbjct: 269 LDERLGQF---DLARLSETLIADRDLQFGYLGLQTLYDRYFLHISERRIELPQAFFMRVA 325
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ YH++S F ++PTLFN+GT R QLSSC+L + D S++GIY
Sbjct: 326 MGLALNEIDREARAIEFYHLLSTFDFMSSTPTLFNSGTRRSQLSSCYLSTVPD-SLDGIY 384
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E +KE A++SK AGG+G +RA G+ I+GTNG S G+VP L+V +DTA V+QGG K
Sbjct: 385 EAIKENALLSKFAGGLGNDWTPVRAMGARIKGTNGKSQGVVPFLKVVSDTAVAVNQGG-K 443
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A+WVPDLFM+R+ + +W+LF
Sbjct: 444 RKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTAVWVPDLFMKRMLEDQEWTLFS 503
Query: 353 PNEASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIETGTPYMLF 407
P++ L + +G FE+ Y YE + ++ + A+ LW ++LT ETG P++ F
Sbjct: 504 PSDTPDLHEKYGKAFEEAYIAYEEQATQGRLALHKRIPARQLWRKMLTMLFETGHPWITF 563
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD CN +S Q ++G + SSNLCTEI T+ E AVCNL SI LP +
Sbjct: 564 KDPCNIRSPQNHVGVVHSSNLCTEITLNTNEKEIAVCNLGSINLP--------------A 609
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
IV + D KL + A L+ +ID+N+Y V AR +NLRHRP+G+G+ G
Sbjct: 610 HIVDGK------LDLTKLKQTVATAMRMLDNVIDINFYAVAKARNANLRHRPVGLGIMGF 663
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D LG+++ S EA + E + YH S+E+A + G Y TYH S +GIL
Sbjct: 664 QDCLHKLGISYASREAVEFADSSMEAVAYHTYWASTELAEERGTYATYHGSLWERGILPQ 723
Query: 588 DMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ +R DW LR+ I + G+RNS +A PTA+ S I+G +
Sbjct: 724 DSLALLQEERGGHVEVDTSSTLDWTPLRERIKQYGMRNSNCLAIAPTATISNIIGVSASI 783
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF VVN+ L++DL + +W + + + DG+ KI IPE L+
Sbjct: 784 EPTYQNLYVKSNLSGEFTVVNQSLVNDLKKQDLWDEVMIADLKHYDGAASKIDRIPENLR 843
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
+Y T +EI LV+ A R +IDQ+QSLN++M + KK+ L+ W RGLKT Y
Sbjct: 844 ALYATAFEIDPRWLVEAAARRQKWIDQAQSLNLYMSGASGKKMDDLYRLAWLRGLKT-TY 902
Query: 757 YLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKM--AQVVCSLTNREECMAC 809
YLR+ A A K TV T P + D ++ A C++ + EC AC
Sbjct: 903 YLRAMGATTAEKSTVHTGTLNAVPAQQNGHTDSSGQIHSATKQCAIDD-PECEAC 956
>gi|73542625|ref|YP_297145.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
eutropha JMP134]
gi|72120038|gb|AAZ62301.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
Length = 979
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 306/764 (40%), Positives = 432/764 (56%), Gaps = 51/764 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKS 93
+P+L ++ +Y+GV +Q+ + A A + PDY+ + ARI + + K +
Sbjct: 189 AEPIL--KETLKNLYEGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGA 246
Query: 94 FSETIKDMYNHYNE------RSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDYF 146
T +M Y E G+ A L+ + + + + A LD+ RDF ++Y
Sbjct: 247 -EVTQAEMTTRYAEYFPKFIARGIAAELLDEKLATFDLARLGAALDA----GRDFQFNYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L + +E PQ MRV++G+ ++ D AI+ Y ++S F ++P
Sbjct: 302 GLQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEADREARAIEFYQLLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD +EGIYE LKE A++SK AGG+G N+RA GS+I+
Sbjct: 362 TLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV NG+W+LF P+ L D G FE+ Y YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGKAFEQAYLGYEAKAASGEL 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K V A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+
Sbjct: 540 KLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTND 599
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
+E AVCNL S+ L +H ++ + + D KL + L+
Sbjct: 600 SEIAVCNLGSVNLV-----------AHLTK----QADGSYVLDHAKLQKTIRTAMRMLDN 644
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY VE AR SNLRHRP+G+G+ G D +L + S A + E + Y+A
Sbjct: 645 VIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYASDAAVKFADTSMEAVCYYA 704
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMI 607
+ S+E+A + G YETY S +GIL D ++ +R DW LR I
Sbjct: 705 YQASTELAEERGRYETYAGSLWDRGILPQDSLKLLAEERGGYLEVDHSSSMDWDSLRGRI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E
Sbjct: 765 KQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKER 824
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W + + Y DGS+ +I IP++L+ IY T +E++ LV+ A R +IDQ+QSL
Sbjct: 825 GLWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + KK+ + W RGLKT YYLR+ AA K TV
Sbjct: 885 NIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTV 927
>gi|295677727|ref|YP_003606251.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. CCGE1002]
gi|295437570|gb|ADG16740.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. CCGE1002]
Length = 1003
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 302/751 (40%), Positives = 424/751 (56%), Gaps = 49/751 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI + + + T+ E +
Sbjct: 196 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 255
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + +R G++A L+ D + + +K A LD+ +RD + Y G +TL Y L
Sbjct: 256 YFPQFIKR-GVQAELLDDKLLQFDLKRLGAALDA----NRDLQFGYLGLQTLYDRYFLHH 310
Query: 160 QGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
+E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLS
Sbjct: 311 DNVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLS 370
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L
Sbjct: 371 SCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFL 429
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PD
Sbjct: 430 KVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPD 488
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWF 391
LFM+RV G W+LF P+ L D +GAEFE YT YE E K K + A LW
Sbjct: 489 LFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFETAYTAYEDKVARGEIKLFKKIPAAQLWR 548
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L
Sbjct: 549 KMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNL 608
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
++E+ D +KL ++ L+ +ID+NYY V AR
Sbjct: 609 VAHLKEQ---------------ADGTVALDHDKLKRTISVAMRMLDNVIDINYYAVAKAR 653
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SNL+HRP+G+G+ G D +L + SPEA + E + Y+A S+E+A + G
Sbjct: 654 NSNLKHRPVGLGIMGFQDCLHVLRTPYASPEAVEFADRSMEAVCYYAYYASTELAEERGR 713
Query: 572 YETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAP 620
Y +Y S +GIL D ++ S+ DW LR I+ G+RNS VA
Sbjct: 714 YSSYRGSLWDRGILPQDSVALLAEARGGYVEVDSSESMDWPALRSRIATYGMRNSNCVAI 773
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G+W + + Y
Sbjct: 774 APTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKY 833
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
DG++ +I IP +L+ IY T +E+ + LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 834 FDGTLSRIDRIPADLRAIYATAFEVDPVWLVESASRRQKWIDQAQSLNIYMAGASGKKLD 893
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++ W RGLKT YYLR+ AA K TV
Sbjct: 894 EIYKLAWLRGLKT-TYYLRTMAATHVEKSTV 923
>gi|431805705|ref|YP_007232606.1| ribonucleotide reductase subunit alpha [Liberibacter crescens BT-1]
gi|430799680|gb|AGA64351.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Liberibacter crescens BT-1]
Length = 953
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 294/768 (38%), Positives = 446/768 (58%), Gaps = 59/768 (7%)
Query: 36 PVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNL--------- 86
P ++ ++ +Y G++ ++L+ + A + P+Y ++AR+ + L
Sbjct: 183 PAVILSEIKRNLYDGLSEAELELASILAARTLIETDPEYTKVSARLLLDKLRLEVLTFIY 242
Query: 87 ---HKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFD 142
K T+ +E D +++Y + G+ A L+ + + + AA L E RD
Sbjct: 243 KKPQKATQAKMTEYYADYFHNY-IKVGIDAELLNPSLSSFDLDSLAASLKPE----RDLS 297
Query: 143 YDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFT 199
++Y G +TL YLL V G E PQ MRV++G+ ++ + AI+ Y ++S F
Sbjct: 298 FEYLGLQTLYDRYLLHVDGIHFEMPQAFFMRVAMGLALNEDNQEKRAIEFYDLLSSFSFM 357
Query: 200 HASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATG 259
++PTLFN+GT RPQLSSCFL DD ++GI++++K+ A+++K +GGIG +R G
Sbjct: 358 CSTPTLFNSGTLRPQLSSCFLTTFPDD-LDGIFKSIKDNALLAKYSGGIGNDWTRVRGLG 416
Query: 260 SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHG 319
++IRGTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+L+KN G
Sbjct: 417 AHIRGTNGKSQGLVPFLKVTNDTAVAVNQGG-KRKGAVCAYLETWHIDIEEFLDLRKNTG 475
Query: 320 KEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER--- 376
+ R D+ A W+PDLFM+RV+ N W+LF P+E L + +G FE Y YE
Sbjct: 476 DDRRRTHDMNTANWIPDLFMKRVENNDVWTLFSPDETPDLHELYGRSFENAYKAYEEKAL 535
Query: 377 EGKAK--KVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIE 434
+GK K K VQA NLW ++LT ETG P++ FKD CN +S QQ++G + SSNLCTEI
Sbjct: 536 QGKIKIFKQVQAVNLWRKMLTMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEITL 595
Query: 435 YTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTE 494
TS E AVCNL SI L + ++ + D++KLA+
Sbjct: 596 NTSDDEVAVCNLGSINLA--------------AHLLSDK------LDYDKLAKTIYTAMR 635
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETI 554
L+ +ID+N+Y ++ A+ SNL+HRPIG+G+ G D L + + S +A L+ + E I
Sbjct: 636 MLDNVIDINFYTIKEAQNSNLKHRPIGMGIMGFQDVLHALRIPYASNKAIDLSDESMEYI 695
Query: 555 YYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR----------WDWGVLR 604
+HA+ S ++A + GPY ++ S SKGIL D +++ +R DW +LR
Sbjct: 696 SFHAISASVDLALERGPYASFQGSLWSKGILPIDSLHLLKDNRGELNVDFSSKLDWSILR 755
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
D + G+RNS +A PTA+ S I G ++ EP N++ + +SG+F +VN L+ DL
Sbjct: 756 DRVKSIGIRNSNCMAIAPTATISNICGVSQSIEPAYQNLFVKSNMSGDFTIVNASLVRDL 815
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
E G+W + + Y DGS+ KI IP++LK +Y T +EI+ + L++ A R +IDQ+
Sbjct: 816 KERGLWDTVMVFDLKYYDGSIGKIDRIPDDLKDLYATAFEIEPIWLIEAAARRQKWIDQA 875
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVD 772
QSLNI++ P+ KK+ ++ + W +GLKT YYLRS +A K T++
Sbjct: 876 QSLNIYLSNPSGKKLDFIYRKAWEKGLKT-TYYLRSSSATHVEKSTLN 922
>gi|192291020|ref|YP_001991625.1| ribonucleotide-diphosphate reductase subunit alpha
[Rhodopseudomonas palustris TIE-1]
gi|192284769|gb|ACF01150.1| ribonucleoside-diphosphate reductase, alpha subunit
[Rhodopseudomonas palustris TIE-1]
Length = 974
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 305/797 (38%), Positives = 439/797 (55%), Gaps = 62/797 (7%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DG + ++ A + + GL D VL + +Y G++ +L A
Sbjct: 155 DGTLHLIDMQRLAAIIAEACAGLDGVSVDAVLAETQ--RNLYDGISDDELALAPILAARI 212
Query: 67 MTTNHPDYASLAARIAVSNL------------HKNTKKSFSETIKDMYNHYNERSGLKAP 114
PDYA ++AR+ + L H+ T+ +E D ++ Y ++G+
Sbjct: 213 FVETEPDYAKVSARLLLDKLRREALSFVEGRPHQATQAQMAERYADYFSAY-VKAGIAHE 271
Query: 115 LIADDIYEI-IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMR 173
LI +I + K AA + E RD +DY G +TL Y L V G E PQ MR
Sbjct: 272 LIDPEIGRFDVSKLAAAIKPE----RDLQFDYLGLQTLYDRYFLHVHGTRFELPQAFFMR 327
Query: 174 VSIGIHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
V+ GI ++D AI+ Y ++S F ++PTLFNAGT RPQLSSCFL + DD ++G
Sbjct: 328 VACGIALREVDREAKAIEFYDLLSSFDFMASTPTLFNAGTLRPQLSSCFLTTVPDD-LDG 386
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I++++K+ A++SK AGG+G ++R G++I+GTNG S GIVP L+V NDTA V+QGG
Sbjct: 387 IFKSIKDNALLSKYAGGLGNDWTHVRGLGAHIKGTNGESQGIVPFLKVANDTAIAVNQGG 446
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KRKGA YLE WH DI EFL+L+KN G + R D+ A WVPDLFM+RV+ NG W+L
Sbjct: 447 -KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEQNGPWTL 505
Query: 351 FCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYM 405
F P+E L D G F + Y YE E + K ++A +LW +LT ETG P++
Sbjct: 506 FSPDETPDLHDLTGRAFAERYAFYEARAARGELRVTKQIRAVDLWRRMLTMLFETGHPWI 565
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
FKD CN +S QQ+ G + SSNLCTEI TS E AVCNL S+ L
Sbjct: 566 TFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSEREVAVCNLGSVNLV------------- 612
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
+ +V R D +L L+ +IDVN+Y + AR SNLRHRP+G+G+
Sbjct: 613 -NHVVDGR------LDCARLERTVTTAMRMLDNVIDVNFYTIPEARASNLRHRPVGLGLM 665
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
G D +L + + S EA + E I Y ++ S ++AA+ G Y +Y S S+GIL
Sbjct: 666 GFQDALNILRLPYASDEAVAFADESMEAIAYWSISASVDLAAERGRYASYDGSLWSQGIL 725
Query: 586 QPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
D +++ R DW LR ++ G+RNS ++A PTA+ S I G ++
Sbjct: 726 PLDSIDLLDEARGAAIEVDRGSRLDWEALRKRVTATGMRNSNVMAIAPTATISNICGVSQ 785
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
EP N+Y + +SG+F VVN HL+ DL G+W + + + Y DGS+ +I +P++
Sbjct: 786 SIEPAYQNLYVKSNMSGDFTVVNTHLVRDLKGRGLWDEVMISDLKYFDGSLGQIDRVPDD 845
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
LK +Y T +EI L++ A R +IDQ+QSLN+++ P+ K + +L+ W RGLKT
Sbjct: 846 LKALYATAFEIDATWLIEAAARRQKWIDQAQSLNLYLANPSGKTLDALYRLAWRRGLKT- 904
Query: 755 MYYLRSRAAADAIKFTV 771
YYLRSR+A K T+
Sbjct: 905 TYYLRSRSATHVEKSTL 921
>gi|254483512|ref|ZP_05096739.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[marine gamma proteobacterium HTCC2148]
gi|214036233|gb|EEB76913.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[marine gamma proteobacterium HTCC2148]
Length = 958
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 315/838 (37%), Positives = 451/838 (53%), Gaps = 66/838 (7%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V++ DG + A+ D++ + + + L E + + +Y GVT +L
Sbjct: 155 VIQPDGSRVALDLDRLHTVVSEACFEL--EDVVESAILDEALKNLYDGVTAEELATSLVI 212
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIAD 118
TA M P+Y+ +AAR+ NL + + T DM Y + L A +
Sbjct: 213 TARTMIEQDPNYSYVAARLLCDNLRAEALSFLGVATNATQADMGQLYAK--ALPAYIARG 270
Query: 119 DIYEIIMKNAACLDSE-----IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMR 173
E++ N A D + ++ +RD + Y G +TL Y + E PQ MR
Sbjct: 271 IELELLSPNLAGYDLQRLGEALLPERDLQFTYLGLQTLYDRYFIHSDETRFELPQVFFMR 330
Query: 174 VSIGIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
V++G+ ++ D AI+ Y ++S + ++PTLFNAGT RPQLSSC+L + DD + G
Sbjct: 331 VAMGLAAEEANRNDRAIEFYELLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LHG 389
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
IY +++ A++SK AGG+G +RA G+YI+GTNG S GIVP L+V NDTA V+QGG
Sbjct: 390 IYGAIQDNAMLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGIVPFLKVVNDTAVAVNQGG 449
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KRKGA YLE WH D+ EF+ L+KN G + R D+ A W+PDLFM+RV W+L
Sbjct: 450 -KRKGAVCAYLETWHMDVEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVFNGEDWTL 508
Query: 351 FCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYM 405
F P++ L D +G FE+ Y HYE E K K V+A+NLW ++L ETG P+M
Sbjct: 509 FSPSDVPDLHDLYGVAFEQRYAHYEAMAAAGEIKLFKTVKAENLWRKMLGMLFETGHPWM 568
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
FKD CN +S QQ++G + SSNLCTEI T+ E AVCNL S+ LP+ + E +
Sbjct: 569 TFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSVNLPQHIDENGL----- 623
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
+ EKL L+ +ID+NYY V A+ SNL HRP+G+G+
Sbjct: 624 ---------------NLEKLRNTVRTAVRMLDNVIDINYYSVPQAKNSNLMHRPVGLGLM 668
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
G D +A+ S +A E I Y+A++ SSE+AA+ G Y +Y S S+G+
Sbjct: 669 GFQDALYKQHLAYGSEQAVSFADHSMEAISYYAIEASSELAAERGAYSSYEGSLWSQGVF 728
Query: 586 QPDMWNVIPSDR------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNN 633
D + +R DW LR + +NG+RNS ++A PTA+ + I G +
Sbjct: 729 PIDSLQRLIDERGADYIQVDQTESMDWQALRSQVQQNGMRNSNVMAIAPTATIANITGVS 788
Query: 634 ECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPE 693
+ EP N+Y + LSGEF VVN +L+ DL E G+W + N + Y DGSVQ I IP
Sbjct: 789 QSIEPTYQNLYVKSNLSGEFTVVNPYLVRDLKERGLWDGVMVNDLKYYDGSVQAIDRIPA 848
Query: 694 ELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKT 753
++K IY T +E++ LVD A R +IDQ+QSLN++++ N KK+ + W GLKT
Sbjct: 849 DIKGIYSTAFEVEPRWLVDAASRRQKWIDQAQSLNLYINNANGKKLDITYRMAWYSGLKT 908
Query: 754 GMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQV--VCSLTNREECMAC 809
YYLRS AA K T+DT V ++ A V CSL + +C AC
Sbjct: 909 -TYYLRSLAATGTEKSTIDTGTLNA-------VSNEAAGPAPVPQACSLDD-PDCEAC 957
>gi|78065155|ref|YP_367924.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. 383]
gi|77965900|gb|ABB07280.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
Length = 998
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 309/774 (39%), Positives = 430/774 (55%), Gaps = 55/774 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + +RI LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + + +K L + +RD + Y
Sbjct: 245 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRV++G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV W+LF P+ L D +GAEFE YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 540 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
+E AVCNL S+ L V++ D GS D +KL ++ L+
Sbjct: 600 SEIAVCNLGSVNLVAHLVKQAD-----------GSFA-----LDHDKLKRTISVAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V AR SNL+HRP+G+G+ G D LL + S A E + Y+
Sbjct: 644 NVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVAFADRSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 704 AYHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWTSLRSR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 IATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
LNI+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 884 LNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|167721299|ref|ZP_02404535.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei DM98]
Length = 942
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 315/805 (39%), Positives = 438/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL +V++ V +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLGNAVSPEPIVAETV-KNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|407714790|ref|YP_006835355.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
phenoliruptrix BR3459a]
gi|407236974|gb|AFT87173.1| ribonucleoside-diphosphate reductase alpha chain [Burkholderia
phenoliruptrix BR3459a]
Length = 1000
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 302/751 (40%), Positives = 423/751 (56%), Gaps = 49/751 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI + + + T+ E +
Sbjct: 195 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + +R G++A L+ D + + +K A LD+ +RD + Y G +TL Y L
Sbjct: 255 YFPQFIKR-GVQAELLDDKLLQFDLKRLGAALDA----NRDLQFGYLGLQTLYDRYFLHH 309
Query: 160 QGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLS
Sbjct: 310 DGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLS 369
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L
Sbjct: 370 SCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFL 428
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PD
Sbjct: 429 KVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPD 487
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWF 391
LFM+RV G W+LF P+ L D +GAEFE YT YE E K K + A LW
Sbjct: 488 LFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWR 547
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L
Sbjct: 548 KMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNL 607
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
++E+ D +KL ++ L+ +ID+NYY V AR
Sbjct: 608 VAHLKEQ---------------ADGTLALDHDKLKRTVSVAMRMLDNVIDINYYAVAKAR 652
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SNL+HRP+G+G+ G D LL + S EA + E + Y+A S+E+A + G
Sbjct: 653 NSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAQERGR 712
Query: 572 YETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAP 620
Y +Y S +GIL D ++ S+ DW LR I+ G+RNS +A
Sbjct: 713 YSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIATYGMRNSNCIAI 772
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G+W + + Y
Sbjct: 773 APTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKY 832
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
DG++ +I IP +L+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 833 FDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLD 892
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++ W RGLKT YYLR+ AA K TV
Sbjct: 893 EIYKLAWVRGLKT-TYYLRTMAATHVEKSTV 922
>gi|397664228|ref|YP_006505766.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
gi|395127639|emb|CCD05838.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
Length = 942
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 317/840 (37%), Positives = 456/840 (54%), Gaps = 71/840 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + +G + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARI--------AVSNLHKNTKKSFSET--IKDMYNHYNERSG 110
+A A+ P+Y ++AR+ A++ L+ ++ +F E I +Y G
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 111 LKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHM 170
+ ++ + + + L ++ +RD + Y +TL Y + +G E PQ
Sbjct: 260 IAQGMLDPKMTDFDLDK---LSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAF 316
Query: 171 LMRVSIGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
MRV++G+ HK++ AI+ Y ++S + ++PTLFN+GT RPQLSSC+L + D
Sbjct: 317 FMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD 374
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V + TA
Sbjct: 375 -HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVA 433
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
V+QGG KRKGA YLE WH D+ EFL L+KN G + R D+ ALWVPDLFM+RV+ +
Sbjct: 434 VNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVRED 492
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYE---REG--KAKKVVQAQNLWFEILTSQIET 400
G W+LF P+E L D +G FE LY YE R+G + K + A LW +L+ ET
Sbjct: 493 GNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSMLFET 552
Query: 401 GTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDV 460
G P++ FKD CN +S QQ+ G I SSNLCTEI TS E AVCNL SI LP +
Sbjct: 553 GHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI----- 607
Query: 461 PVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
KN D +KL + L+ +ID+NYY V AR SNL+HRPI
Sbjct: 608 ---------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQHRPI 652
Query: 521 GIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPV 580
G+G+ G D L M + S EA + E I Y+A++ S ++A + G Y TY S
Sbjct: 653 GLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLW 712
Query: 581 SKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQI 629
SKGIL D N++ S + DW LR + G+RNS ++A PTA+ S I
Sbjct: 713 SKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNI 772
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIP 689
G ++ EP N+Y + LSGEF VVN +L+ DL + +W + N + Y +GSVQ I
Sbjct: 773 CGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKTLNLWDEVMVNDLKYFNGSVQPIS 832
Query: 690 EIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSR 749
IPEELK Y T +EI M LV+ A R +IDQ+QSLNI+M QP+ KK+ L+ W R
Sbjct: 833 RIPEELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIR 892
Query: 750 GLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
GLKT YYLRS A++A K TV ++D E K CS+T+ +C AC
Sbjct: 893 GLKT-TYYLRSLGASNAEKSTVTDGALNAVK-----LIDTEPK----ACSITD-PDCEAC 941
>gi|53720600|ref|YP_109586.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei K96243]
gi|53726101|ref|YP_104056.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei ATCC 23344]
gi|67643594|ref|ZP_00442339.1| ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Burkholderia mallei GB8 horse 4]
gi|76810342|ref|YP_334882.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1710b]
gi|121601276|ref|YP_991781.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei SAVP1]
gi|124384186|ref|YP_001027274.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei NCTC 10229]
gi|126439753|ref|YP_001060485.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 668]
gi|126448585|ref|YP_001082789.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei NCTC 10247]
gi|126454560|ref|YP_001067749.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1106a]
gi|134280283|ref|ZP_01766994.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 305]
gi|166998594|ref|ZP_02264452.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei PRL-20]
gi|167825889|ref|ZP_02457360.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 9]
gi|217420768|ref|ZP_03452273.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 576]
gi|226196789|ref|ZP_03792368.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pakistan 9]
gi|237813880|ref|YP_002898331.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei MSHR346]
gi|242315545|ref|ZP_04814561.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1106b]
gi|254178878|ref|ZP_04885532.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei ATCC 10399]
gi|254180585|ref|ZP_04887183.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1655]
gi|254190978|ref|ZP_04897484.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|254199123|ref|ZP_04905538.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei S13]
gi|254202775|ref|ZP_04909138.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei FMH]
gi|254208117|ref|ZP_04914467.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei JHU]
gi|254257988|ref|ZP_04949042.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1710a]
gi|254299328|ref|ZP_04966778.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 406e]
gi|386860430|ref|YP_006273379.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026b]
gi|403520184|ref|YP_006654318.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei BPC006]
gi|418538893|ref|ZP_13104494.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026a]
gi|418539663|ref|ZP_13105246.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258a]
gi|418545913|ref|ZP_13111151.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258b]
gi|418552364|ref|ZP_13117229.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 354e]
gi|52211014|emb|CAH37002.1| putative ribonucleoside reductase [Burkholderia pseudomallei
K96243]
gi|52429524|gb|AAU50117.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei ATCC 23344]
gi|76579795|gb|ABA49270.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1710b]
gi|121230086|gb|ABM52604.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei SAVP1]
gi|124292206|gb|ABN01475.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei NCTC 10229]
gi|126219246|gb|ABN82752.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 668]
gi|126228202|gb|ABN91742.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1106a]
gi|126241455|gb|ABO04548.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei NCTC 10247]
gi|134248290|gb|EBA48373.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 305]
gi|147747022|gb|EDK54099.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei FMH]
gi|147752011|gb|EDK59078.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei JHU]
gi|157809187|gb|EDO86357.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 406e]
gi|157938652|gb|EDO94322.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|160694792|gb|EDP84800.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei ATCC 10399]
gi|169656953|gb|EDS88350.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei S13]
gi|184211124|gb|EDU08167.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1655]
gi|217396180|gb|EEC36197.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 576]
gi|225931049|gb|EEH27057.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pakistan 9]
gi|237505593|gb|ACQ97911.1| ribonucleoside-diphosphate reductase subunit alpha (Ribonucleotide
reductase) [Burkholderia pseudomallei MSHR346]
gi|238524966|gb|EEP88396.1| ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Burkholderia mallei GB8 horse 4]
gi|242138784|gb|EES25186.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1106b]
gi|243065277|gb|EES47463.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei PRL-20]
gi|254216677|gb|EET06061.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1710a]
gi|385346574|gb|EIF53249.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026a]
gi|385364108|gb|EIF69851.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258a]
gi|385365931|gb|EIF71584.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258b]
gi|385373198|gb|EIF78264.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 354e]
gi|385657558|gb|AFI64981.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026b]
gi|403075827|gb|AFR17407.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei BPC006]
Length = 995
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 314/805 (39%), Positives = 437/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|194290771|ref|YP_002006678.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
taiwanensis LMG 19424]
gi|193224606|emb|CAQ70617.1| Ribonucleoside-diphosphate reductase alpha subunit [Cupriavidus
taiwanensis LMG 19424]
Length = 979
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 309/765 (40%), Positives = 429/765 (56%), Gaps = 53/765 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKS 93
+P+L ++ +Y+GV +Q+ + A A + PDY+ + ARI + + K +
Sbjct: 189 AEPIL--KETLKNLYEGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGT 246
Query: 94 FSETIKDMYNHYNE------RSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDYF 146
T +M Y E G+ A L+ + + + + A LD+ RDF ++Y
Sbjct: 247 -EVTQAEMATRYAEYFPKFIARGIAAELLDEKLATFDLARLGAALDA----GRDFQFNYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGI---HKDDIDSAIKTYHMMSQRWFTHASP 203
G +TL Y L + +E PQ MRV++G+ KD AI+ Y ++S F ++P
Sbjct: 302 GLQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEKDREARAIEFYQLLSSFDFMSSTP 361
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD +EGIYE LKE A++SK AGG+G N+RA GS+I+
Sbjct: 362 TLFNSGTQRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV N +W+LF P+ L D G FEK Y YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMENAEWTLFSPSTCPDLHDKVGKAFEKAYLGYEAKAANGEL 539
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K V A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+
Sbjct: 540 KLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTND 599
Query: 439 TETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
+E AVCNL S+ L ++ D GS D KL + L+
Sbjct: 600 SEIAVCNLGSVNLVAHLAKQAD-----------GSYA-----LDHAKLQKTIRTAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY VE AR SNLRHRP+G+G+ G D +L + S A + E + Y+
Sbjct: 644 NVIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYSSDAAVKFADTSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDM 606
A + S+E+A + G YETY S +GIL D ++ +R DW LR
Sbjct: 704 AYQASTELAEERGRYETYTGSLWDRGILPQDSLKLLAEERGGYLDVDMSSSMDWTSLRAR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E
Sbjct: 764 IKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DGS+ +I IP++L+ IY T +E++ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
LNI+M + KK+ + W RGLKT YYLR+ AA K TV
Sbjct: 884 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTV 927
>gi|167912608|ref|ZP_02499699.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 112]
Length = 953
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 314/805 (39%), Positives = 437/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|167740268|ref|ZP_02413042.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 14]
gi|167817488|ref|ZP_02449168.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 91]
gi|167847375|ref|ZP_02472883.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei B7210]
Length = 954
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 314/805 (39%), Positives = 437/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|424902823|ref|ZP_18326336.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis MSMB43]
gi|390930696|gb|EIP88097.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis MSMB43]
Length = 965
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 311/804 (38%), Positives = 437/804 (54%), Gaps = 52/804 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + +P + + +Y GV +Q+ + +
Sbjct: 127 VTDNGVTRALDLNALRALIVSACEGLG-DAVNPEPIVAETVKNLYDGVPMTQVYDSSILA 185
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + AR+ LH ++ E + +M Y E + G++A L
Sbjct: 186 ARTMIEKDPAYSQVTARVL---LHTIRREILGEEVTQAEMATRYAEYFPQFLKRGVEAEL 242
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 243 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 299
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 300 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 358
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 359 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 417
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV G W+LF
Sbjct: 418 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFS 477
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 478 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 537
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L +H
Sbjct: 538 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV-----------AH-- 584
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
+ + D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 585 --LAKQADGTYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 642
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 643 QDCLHLLRTPYASGEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 702
Query: 588 DMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 703 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 762
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L+
Sbjct: 763 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 822
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT Y
Sbjct: 823 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TY 881
Query: 757 YLRSRAAADAIKFTVDTSVFKEKP 780
YLR+ AA K TV P
Sbjct: 882 YLRTMAATHVEKSTVAHGALNAVP 905
>gi|167895963|ref|ZP_02483365.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 7894]
Length = 995
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 314/805 (39%), Positives = 437/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|383760081|ref|YP_005439067.1| ribonucleoside-diphosphate reductase, alpha subunit NrdA
[Rubrivivax gelatinosus IL144]
gi|381380751|dbj|BAL97568.1| ribonucleoside-diphosphate reductase, alpha subunit NrdA
[Rubrivivax gelatinosus IL144]
Length = 951
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 313/838 (37%), Positives = 458/838 (54%), Gaps = 60/838 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDEL 59
++VV R G++ + + + + +++ GL + +P+L + +Y GV ++ +
Sbjct: 144 LHVVDR-GQRVPLDLEGLRSLVEQACAGLGDDVRAEPILAETR--RNLYDGVPLDEVYKA 200
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHKNTKKS--FSETIKDMYNHYNE---RSGLKAP 114
+ A + P Y AR+ + + + + E + Y Y R G++A
Sbjct: 201 SILAARTLIEKDPAYTRATARLLLHTIRREILGADVRPEAMAARYAEYFPEYVRQGVQAE 260
Query: 115 LIADDIYEI-IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMR 173
L+ +++ +++ A L E RD +DY G +TL Y L V G+ +E PQ MR
Sbjct: 261 LLDEELQRFDLVRLGAALKPE----RDLQFDYLGLQTLYDRYFLHVDGRRIELPQAFFMR 316
Query: 174 VSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
V++G+ ++ID AI+ Y ++S F ++PTLFN+GT R QLSSC+L + DD +EG
Sbjct: 317 VAMGLALNEIDREARAIEFYDVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LEG 375
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
IYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG
Sbjct: 376 IYEALKENALLSKFAGGLGNDWTPVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 435
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KRKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV G W+L
Sbjct: 436 -KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTL 494
Query: 351 FCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYM 405
F P+ L D +GA FE Y YER E + K + A++LW ++LT ETG P++
Sbjct: 495 FSPSSCPDLHDKFGAAFEDAYVAYERKADQGEMRPFKRLPAKDLWRKMLTMLFETGHPWI 554
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
FKD CN +S QQ++G + SSNLCTEI TS +E AVCNL SI L + V +
Sbjct: 555 TFKDACNLRSPQQHVGVVHSSNLCTEITLNTSASEIAVCNLGSINLAQHVAGGGI----- 609
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
D KL + L+ +ID+NYY V+ AR +NLRHRP+G+G+
Sbjct: 610 ---------------DQAKLKRTVSTAMRMLDNVIDINYYAVKKARDANLRHRPVGLGLM 654
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
G D L + + S A + E + YHA SSE+A + G Y +Y S +G+L
Sbjct: 655 GFQDCLYQLRLPYASEAAVEFADRSMEALCYHAYWASSELAEERGRYSSYRGSLWDRGVL 714
Query: 586 QPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
D +++ + R DW LR I+ +G+RNS VA PTA+ S I+G +
Sbjct: 715 PQDTLDLLAAARGGHVEVDRSETLDWAALRARIAAHGMRNSNCVAIAPTATISNIIGVDA 774
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
EP N+ + LSGEF VVN++L+ DL +G+W + + + DGS++ I +P+E
Sbjct: 775 SIEPCFGNLSVKSNLSGEFTVVNEYLVRDLKRLGLWDDVMVMDLKHFDGSLRAIDRVPDE 834
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
LK +Y T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W+RGLKT
Sbjct: 835 LKQLYATAFEVDARWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWTRGLKT- 893
Query: 755 MYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQV---VCSLTNREECMAC 809
YYLR+ +A A K TV P+ L CS+ N +C AC
Sbjct: 894 TYYLRTMSATHAEKSTVAPGAMNAVPQHGGLDASAAAAEPASDVRFCSIDN-PDCEAC 950
>gi|397667501|ref|YP_006509038.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
gi|395130912|emb|CCD09161.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
Length = 942
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 319/845 (37%), Positives = 460/845 (54%), Gaps = 81/845 (9%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + +G + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRNLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARI--------AVSNLHKNTKKSFSETIKDM---YNHYNER- 108
+A A+ P+Y ++AR+ A++ L+ ++ +F E + + Y E+
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 109 --SGLKAPLIAD-DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
G+ P +AD D+ + L ++ +RD + Y +TL Y + +G E
Sbjct: 260 IAQGMLDPKMADFDLDK--------LSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYE 311
Query: 166 RPQHMLMRVSIGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL 220
PQ MRV++G+ HK++ AI+ Y ++S + ++PTLFN+GT RPQLSSC+L
Sbjct: 312 LPQAFFMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYL 369
Query: 221 VCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 280
+ D ++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V +
Sbjct: 370 TTVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVAD 428
Query: 281 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFME 340
TA V+QGG KRKGA YLE WH D+ EFL L+KN G + R D+ ALWVPDLFM+
Sbjct: 429 ATAVAVNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMK 487
Query: 341 RVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYE---REG--KAKKVVQAQNLWFEILT 395
RV+ +G W+LF P+E L D +G FE LY YE R+G + K + A LW +L+
Sbjct: 488 RVREDGNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLS 547
Query: 396 SQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
ETG P++ FKD CN +S QQ+ G I SSNLCTEI TS E AVCNL SI LP +
Sbjct: 548 MLFETGHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI 607
Query: 456 REKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL 515
KN D +KL + L+ +ID+NYY V AR SNL
Sbjct: 608 --------------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNL 647
Query: 516 RHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETY 575
+HRP+G+G+ G D L M + S EA + E I Y+A++ S ++A + G Y TY
Sbjct: 648 QHRPVGLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTY 707
Query: 576 HNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTA 624
S SKGIL D N++ S + DW LR + G+RNS ++A PTA
Sbjct: 708 EGSLWSKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTA 767
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGS 684
+ S I G ++ EP N+Y + LSGEF VVN +L+ DL + +W + N + Y +GS
Sbjct: 768 TISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGS 827
Query: 685 VQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHF 744
VQ I IP+ELK Y T +EI M LV+ A R +IDQ+QSLNI+M QP+ KK+ L+
Sbjct: 828 VQPISRIPDELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYM 887
Query: 745 RTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNRE 804
W RGLKT YYLRS A++A K TV ++D E K CS+T+
Sbjct: 888 HAWIRGLKT-TYYLRSLGASNAEKSTVTDGALNAVK-----LIDTEPK----ACSITD-P 936
Query: 805 ECMAC 809
+C AC
Sbjct: 937 DCEAC 941
>gi|52842001|ref|YP_095800.1| ribonucleotide-diphosphate reductase subunit alpha [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|296107365|ref|YP_003619065.1| ribonucleoside-diphosphate reductase subunit alpha [Legionella
pneumophila 2300/99 Alcoy]
gi|378777635|ref|YP_005186073.1| ribonucleoside-diphosphate reductase subunit alpha [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629112|gb|AAU27853.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|295649266|gb|ADG25113.1| ribonucleoside-diphosphate reductase alpha chain [Legionella
pneumophila 2300/99 Alcoy]
gi|307610474|emb|CBX00046.1| hypothetical protein LPW_18011 [Legionella pneumophila 130b]
gi|364508450|gb|AEW51974.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 942
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 320/845 (37%), Positives = 460/845 (54%), Gaps = 81/845 (9%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + +G + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARI--------AVSNLHKNTKKSFSETIKDM---YNHYNER- 108
+A A+ P+Y ++AR+ A++ L+ ++ +F E + + Y E+
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 109 --SGLKAPLIAD-DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
G+ P +AD D+ + L ++ +RD + Y +TL Y + +G E
Sbjct: 260 IAQGMLDPKMADFDLDK--------LSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYE 311
Query: 166 RPQHMLMRVSIGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL 220
PQ MRV++G+ HK++ AI+ Y ++S + ++PTLFN+GT RPQLSSC+L
Sbjct: 312 LPQAFFMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYL 369
Query: 221 VCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 280
+ D ++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V +
Sbjct: 370 TTVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVAD 428
Query: 281 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFME 340
TA V+QGG KRKGA YLE WH D+ EFL L+KN G + R D+ ALWVPDLFM+
Sbjct: 429 ATAVAVNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMK 487
Query: 341 RVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYE---REG--KAKKVVQAQNLWFEILT 395
RV+ +G W+LF P+E L D +G FE LY YE R+G + K + A LW +L+
Sbjct: 488 RVREDGNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLS 547
Query: 396 SQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
ETG P++ FKD CN +S QQ+ G I SSNLCTEI TS E AVCNL SI LP +
Sbjct: 548 MLFETGHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI 607
Query: 456 REKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL 515
KN D +KL + L+ +ID+NYY V AR SNL
Sbjct: 608 --------------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNL 647
Query: 516 RHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETY 575
+HRPIG+G+ G D L M + S EA + E I Y+A++ S ++A + G Y TY
Sbjct: 648 QHRPIGLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTY 707
Query: 576 HNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTA 624
S SKGIL D N++ S + DW LR + G+RNS ++A PTA
Sbjct: 708 EGSLWSKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTA 767
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGS 684
+ S I G ++ EP N+Y + LSGEF VVN +L+ DL + +W + N + Y +GS
Sbjct: 768 TISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGS 827
Query: 685 VQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHF 744
VQ I IP+ELK Y T +EI M LV+ A R +IDQ+QSLNI+M QP+ KK+ L+
Sbjct: 828 VQPISRIPDELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYM 887
Query: 745 RTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNRE 804
W RGLKT YYLRS A++A K TV ++D E K CS+T+
Sbjct: 888 HAWIRGLKT-TYYLRSLGASNAEKSTVTDGALNAVK-----LIDTEPK----ACSITD-P 936
Query: 805 ECMAC 809
+C AC
Sbjct: 937 DCEAC 941
>gi|312795098|ref|YP_004028020.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
rhizoxinica HKI 454]
gi|312166873|emb|CBW73876.1| Ribonucleoside-diphosphate reductase alpha chain (EC 1.17.4.1)
[Burkholderia rhizoxinica HKI 454]
Length = 1046
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 309/790 (39%), Positives = 434/790 (54%), Gaps = 56/790 (7%)
Query: 18 ITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
ITA L +S E P++ + +Y GV SQ+ + A A M P Y+ +
Sbjct: 227 ITAACDGLGEAVSAE---PIVA--ETVKNLYDGVPLSQVYDSAILAARTMIEKEPAYSQV 281
Query: 78 AARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAA 129
AR+ LH ++ E + +M Y E + G++A L+ + + + +K
Sbjct: 282 TARLL---LHTIRREILGEEVLQSEMGARYAEYFPQFLKRGVEAELLDEKLLQFDLKK-- 336
Query: 130 CLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---A 186
L + RD + Y G +TL Y L V G+ +E PQ MRV++G+ ++ID A
Sbjct: 337 -LGDALDASRDLKFGYLGLQTLYDRYFLHVDGQRIEMPQAFFMRVAMGLALNEIDREARA 395
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAG 246
I+ Y+++S F ++PTLFN+GT R QLSSC+L + DD +EGIYE LKE A++SK AG
Sbjct: 396 IEFYNVLSTFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LEGIYEALKENALLSKFAG 454
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
G+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH
Sbjct: 455 GLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHL 513
Query: 307 DIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAE 366
DI EFL L+KN G + R D+ A W+PDLFM+RV G W+LF P+ L D +GAE
Sbjct: 514 DIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVIEGGDWTLFSPSSCPDLHDKFGAE 573
Query: 367 FEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLG 421
FE+ Y YE E K K + A LW ++L ETG P++ FKD C +S QQ++G
Sbjct: 574 FEQAYVAYEEKAARGELKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCXVRSPQQHVG 633
Query: 422 TIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFD 481
+ SSNLCTEI TS E AVCNL S+ L +++ D
Sbjct: 634 VVHSSNLCTEITLNTSDNEIAVCNLGSVNLVAHMKQG---------------ADXGYVLD 678
Query: 482 FEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESP 541
+KL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G D LL + S
Sbjct: 679 HDKLKRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASQ 738
Query: 542 EAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR---- 597
+A + E I Y+A S+E+A++ G Y +Y S +GIL D ++ R
Sbjct: 739 QAVEFADRSMEAICYYAYWASTELASERGRYSSYRGSLWDRGILPQDTLKLLADSRGGYV 798
Query: 598 -------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLS 650
DW LR+ I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LS
Sbjct: 799 EVDSSETMDWAALRERIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLS 858
Query: 651 GEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTL 710
GEF VVN++L+ DL G+W + + Y DGS+ +I IP +L+ Y T +E+ L
Sbjct: 859 GEFTVVNEYLVRDLKARGLWDEVMVADLKYFDGSLARIDRIPADLRETYATAFEVDPKWL 918
Query: 711 VDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFT 770
V+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT YYLR+ AA K T
Sbjct: 919 VEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWLRGLKT-TYYLRTIAATHVEKST 977
Query: 771 VDTSVFKEKP 780
V P
Sbjct: 978 VAHGALNAVP 987
>gi|167574514|ref|ZP_02367388.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
oklahomensis C6786]
Length = 944
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 305/771 (39%), Positives = 424/771 (54%), Gaps = 49/771 (6%)
Query: 36 PVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------ 89
P + + +Y GV +Q+ + A A M P Y+ + ARI + + +
Sbjct: 188 PEPIVSETVKNLYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
T+ S + + + +R G++A L+ D + + +K L + RD + Y G +
Sbjct: 248 TQAEMSMRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLF 206
TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTN 266
N+GT R QLSSC+L + DD ++GIYE LK+ A++SK AGG+G +RA GS+I+GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAK 381
D+ A W+PDLFM+RV W+LF P+ L D +GAEFE Y YE E K
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 382 KVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTET 441
K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS TE
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKII 500
AVCNL S+ L ++ D GS D EKL + L+ +I
Sbjct: 602 AVCNLGSVNLVAHLAKQAD-----------GSYA-----LDQEKLKRTVGVAMRMLDNVI 645
Query: 501 DVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALK 560
D+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+A
Sbjct: 646 DINYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYAYY 705
Query: 561 TSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMISK 609
S+E+A + G Y +Y S +GIL D ++ R DW VLR I
Sbjct: 706 ASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPVLRARIDS 765
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGI 669
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E G+
Sbjct: 766 FGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGL 825
Query: 670 WSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNI 729
W + + Y DG + +I +P +L+ IY T +E+ LV+ A R +IDQ+QSLNI
Sbjct: 826 WDEVMVADLKYFDGMLSRIDRVPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNI 885
Query: 730 HMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 886 YMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|148359318|ref|YP_001250525.1| ribonucleoside-diphosphate reductase subunit alpha [Legionella
pneumophila str. Corby]
gi|148281091|gb|ABQ55179.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
pneumophila str. Corby]
Length = 917
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 320/845 (37%), Positives = 460/845 (54%), Gaps = 81/845 (9%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + +G + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 117 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 174
Query: 61 AETAAAMTTNHPDYASLAARI--------AVSNLHKNTKKSFSETIKDM---YNHYNER- 108
+A A+ P+Y ++AR+ A++ L+ ++ +F E + + Y E+
Sbjct: 175 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 234
Query: 109 --SGLKAPLIAD-DIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
G+ P +AD D+ + L ++ +RD + Y +TL Y + +G E
Sbjct: 235 IAQGMLDPKMADFDLDK--------LSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYE 286
Query: 166 RPQHMLMRVSIGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFL 220
PQ MRV++G+ HK++ AI+ Y ++S + ++PTLFN+GT RPQLSSC+L
Sbjct: 287 LPQAFFMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYL 344
Query: 221 VCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 280
+ D ++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V +
Sbjct: 345 TTVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVAD 403
Query: 281 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFME 340
TA V+QGG KRKGA YLE WH D+ EFL L+KN G + R D+ ALWVPDLFM+
Sbjct: 404 ATAVAVNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMK 462
Query: 341 RVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYE---REG--KAKKVVQAQNLWFEILT 395
RV+ +G W+LF P+E L D +G FE LY YE R+G + K + A LW +L+
Sbjct: 463 RVREDGNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLS 522
Query: 396 SQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
ETG P++ FKD CN +S QQ+ G I SSNLCTEI TS E AVCNL SI LP +
Sbjct: 523 MLFETGHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI 582
Query: 456 REKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNL 515
KN D +KL + L+ +ID+NYY V AR SNL
Sbjct: 583 --------------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNL 622
Query: 516 RHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETY 575
+HRPIG+G+ G D L M + S EA + E I Y+A++ S ++A + G Y TY
Sbjct: 623 QHRPIGLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTY 682
Query: 576 HNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTA 624
S SKGIL D N++ S + DW LR + G+RNS ++A PTA
Sbjct: 683 EGSLWSKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTA 742
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGS 684
+ S I G ++ EP N+Y + LSGEF VVN +L+ DL + +W + N + Y +GS
Sbjct: 743 TISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGS 802
Query: 685 VQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHF 744
VQ I IP+ELK Y T +EI M LV+ A R +IDQ+QSLNI+M QP+ KK+ L+
Sbjct: 803 VQPISRIPDELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYM 862
Query: 745 RTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNRE 804
W RGLKT YYLRS A++A K TV ++D E K CS+T+
Sbjct: 863 HAWIRGLKT-TYYLRSLGASNAEKSTVTDGALNAVK-----LIDTEPK----ACSITD-P 911
Query: 805 ECMAC 809
+C AC
Sbjct: 912 DCEAC 916
>gi|209521090|ref|ZP_03269820.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. H160]
gi|209498473|gb|EDZ98598.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. H160]
Length = 1003
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 302/751 (40%), Positives = 423/751 (56%), Gaps = 49/751 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI + + + T+ E +
Sbjct: 196 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 255
Query: 101 MYNHYNERSGLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + +R G+ A L+ D + + +K A LD+ +RD + Y G +TL Y L
Sbjct: 256 YFPQFIKR-GIGAGLLDDKLQQFDLKRLGAALDA----NRDLQFGYLGLQTLYDRYFLHH 310
Query: 160 QGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLS 216
G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLS
Sbjct: 311 DGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNILSSFDFMSSTPTLFNSGTHRSQLS 370
Query: 217 SCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L
Sbjct: 371 SCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFL 429
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPD 336
+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PD
Sbjct: 430 KVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPD 488
Query: 337 LFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWF 391
LFM+RV G W+LF P+ L D +GAEFE YT YE E K K + A LW
Sbjct: 489 LFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKLPAAQLWR 548
Query: 392 EILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL 451
++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS E AVCNL S+ L
Sbjct: 549 KMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNL 608
Query: 452 PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETAR 511
++E+ D +KL ++ L+ +ID+NYY V AR
Sbjct: 609 VAHLKEQ---------------ADGTLALDHDKLKRTVSVAMRMLDNVIDINYYAVAKAR 653
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP 571
SNL+HRP+G+G+ G D +L + S EA + E + Y+A S+E+A + G
Sbjct: 654 NSNLKHRPVGLGIMGFQDCLHMLRTPYASQEAVEFADRSMEAVCYYAYYASTELAEERGR 713
Query: 572 YETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAP 620
Y +Y S +GIL D ++ S+ DW LR I+ G+RNS VA
Sbjct: 714 YSSYRGSLWDRGILPQDSVALLAEARGGYVEVDSSESMDWPALRSRIATYGMRNSNCVAI 773
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIY 680
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G+W + + Y
Sbjct: 774 APTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKY 833
Query: 681 DDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVT 740
DG++ +I IP +L+ IY T +E+ + LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 834 FDGTLSRIDRIPADLRAIYATAFEVDPVWLVESASRRQKWIDQAQSLNIYMAGASGKKLD 893
Query: 741 SLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++ W RGLKT YYLR+ AA K TV
Sbjct: 894 EIYKLAWLRGLKT-TYYLRTMAATHVEKSTV 923
>gi|374370404|ref|ZP_09628408.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
basilensis OR16]
gi|373098056|gb|EHP39173.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
basilensis OR16]
Length = 980
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 305/765 (39%), Positives = 429/765 (56%), Gaps = 53/765 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN---- 89
+P+L ++ +Y GV +Q+ + A A + P Y+ + ARI + + K
Sbjct: 187 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPAYSQVTARILLHTIRKEILGA 244
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDI--YEIIMKNAACLDSEIIYDRDFDYDY 145
T+ D + + R G++A L+ + + Y++ AA LD++ RDF ++Y
Sbjct: 245 EVTQTEMVSRYADYFPKFIAR-GIEAELLDEKLATYDLARLGAA-LDAQ----RDFQFNY 298
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI---HKDDIDSAIKTYHMMSQRWFTHAS 202
G +TL Y L + +E PQ MRV++G+ KD AI+ Y ++S F ++
Sbjct: 299 LGLQTLYDRYFLHIDEVRIEMPQAFFMRVAMGLALGEKDREARAIEFYQLLSSFDFMSST 358
Query: 203 PTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R QLSSC+L + DD +EGIYE LKE A++SK AGG+G N+RA GS+I
Sbjct: 359 PTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 417
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 418 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 476
Query: 323 HRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----E 377
R D+ A W+PDLFM+RV G+W+LF P L D G FE+ Y YE E
Sbjct: 477 RRTHDMNTANWIPDLFMKRVMEAGEWTLFSPATCPDLHDLVGKAFEQAYLGYEAKAARGE 536
Query: 378 GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+
Sbjct: 537 LKLFKKIPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 596
Query: 438 PTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
+E AVCNL S+ L +++ + D KL + L+
Sbjct: 597 ESEIAVCNLGSVNLVAHLKQ---------------LADGTQVLDHAKLEKTVRTAMRMLD 641
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY VE AR SNLRHRP+G+G+ G D LL + + S A Q E + Y+
Sbjct: 642 NVIDINYYAVEKARSSNLRHRPVGMGIMGFQDCLHLLRLPYASDAAVQFADTSMEAVCYY 701
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDM 606
A + SSE+A + G Y TY S +GIL D ++ +R DW LR
Sbjct: 702 AYRASSELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLEVDHSSAMDWDSLRAR 761
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 762 IKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 821
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DG + +I IP++L+ IY T +E++ LV+ A R +IDQ+QS
Sbjct: 822 RGLWDEVMVADLKYFDGKLARIDRIPQDLRDIYATAFEVEPSWLVEAASRRQKWIDQAQS 881
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
LNI+M + KK+ + W RGLKT YYLR+ AA K TV
Sbjct: 882 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTV 925
>gi|262373380|ref|ZP_06066659.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
junii SH205]
gi|262313405|gb|EEY94490.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
junii SH205]
Length = 944
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 318/851 (37%), Positives = 462/851 (54%), Gaps = 71/851 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + +G+ + + D +TA ++ S GL E D + + +Y GV S +
Sbjct: 122 LQITDHNGQLQPLDLDALTATIETASEGL--EGIDVQAIVDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNE---RSGLKAPLIA 117
P+Y + AR+ + L + + N E + G++ L++
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLCNELVGTGLEFLGLSTDTSENDALEPFLKKGIELDLLS 239
Query: 118 DDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIG 177
D+ + A L + I +R + Y G +TL Y + G E PQ MRVS+G
Sbjct: 240 PDLLNF---DLAKLSAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSMG 296
Query: 178 I---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ ++ + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 297 LALNEENKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYGA 355
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 356 MRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KRK 414
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA YLE WH D+ EFL L+KN G + R D+ A WVPDLFM+RV + +W+LF P+
Sbjct: 415 GAVCAYLETWHLDVEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDAEWTLFTPS 474
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKDT 410
E L D GAEF + YTHYE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 475 ETPDLHDLTGAEFAERYTHYEAVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKDV 534
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
CN +S QQ++G + SSNLCTEI TS E AVCNL SI L + V
Sbjct: 535 CNLRSPQQHVGVVHSSNLCTEITLNTSQDEIAVCNLGSINLVQHV--------------- 579
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
+ D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 -----QGGVLDREKLARTIKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQDA 634
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD-- 588
+G+A+ S A + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 635 LYEMGIAYGSDAAVDFADESMEVISYYAIQTSSDLALERGAYSTFKGSLWDQGILPIDSL 694
Query: 589 ----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ EP
Sbjct: 695 ELVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIEP 754
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK I
Sbjct: 755 TFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKAI 814
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YYL
Sbjct: 815 FATAFEVETRWIVDAASRRQKWIDQAQSLNLYIAGANGKKLDITYKMAWLRGLKT-TYYL 873
Query: 759 RSRAAADAIKFTVDTSVFK-------EKP---------EKPELVVDDE--TKMAQV--VC 798
R+ A A K T++T E P +KPE V+++ T A V C
Sbjct: 874 RALGATSAEKSTINTGALNAVKPASVEAPVVAAQAVEEKKPEAQVEEDGFTTAAPVPMAC 933
Query: 799 SLTNREECMAC 809
S+ N +C AC
Sbjct: 934 SIDN-PDCEAC 943
>gi|167564162|ref|ZP_02357078.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
oklahomensis EO147]
Length = 953
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 305/771 (39%), Positives = 424/771 (54%), Gaps = 49/771 (6%)
Query: 36 PVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------ 89
P + + +Y GV +Q+ + A A M P Y+ + ARI + + +
Sbjct: 188 PEPIVSETVKNLYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
T+ S + + + +R G++A L+ D + + +K L + RD + Y G +
Sbjct: 248 TQAEMSMRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLF 206
TL Y L V G +E PQ MRV++G+ ++ID AI+ Y+++S F ++PTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTN 266
N+GT R QLSSC+L + DD ++GIYE LK+ A++SK AGG+G +RA GS+I+GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAK 381
D+ A W+PDLFM+RV W+LF P+ L D +GAEFE Y YE E K
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 382 KVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTET 441
K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS TE
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKII 500
AVCNL S+ L ++ D GS D EKL + L+ +I
Sbjct: 602 AVCNLGSVNLVAHLAKQAD-----------GSYA-----LDQEKLKRTVGVAMRMLDNVI 645
Query: 501 DVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALK 560
D+NYY V AR SNL+HRP+G+G+ G D LL + S A + E + Y+A
Sbjct: 646 DINYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYAYY 705
Query: 561 TSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMISK 609
S+E+A + G Y +Y S +GIL D ++ R DW VLR I
Sbjct: 706 ASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPVLRARIDS 765
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGI 669
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E G+
Sbjct: 766 FGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGL 825
Query: 670 WSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNI 729
W + + Y DG + +I +P +L+ IY T +E+ LV+ A R +IDQ+QSLNI
Sbjct: 826 WDEVMVADLKYFDGMLSRIDRVPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNI 885
Query: 730 HMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
+M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 886 YMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|268316002|ref|YP_003289721.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodothermus
marinus DSM 4252]
gi|262333536|gb|ACY47333.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodothermus
marinus DSM 4252]
Length = 926
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 304/798 (38%), Positives = 449/798 (56%), Gaps = 61/798 (7%)
Query: 5 KRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETA 64
+ DG + + + AR++ GL + DP LV +++ VY G+ +LD A
Sbjct: 120 RADGTEAPFPHEALRARIEAACDGL--DDVDPELVREELLRTVYPGIPEDELDRALILAA 177
Query: 65 AAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPL--------I 116
PDY +AAR+ + L++ F I R+G +A L +
Sbjct: 178 RTHIEREPDYTYVAARLLLDALYREV---FGRPIPPSEQAEACRAGFRAYLEHGVRLGRL 234
Query: 117 ADDIYEI--IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLL-KVQGKVVERPQHMLMR 173
+ + I + AA L E RD + + G +TL YLL + +G+ E PQ++ MR
Sbjct: 235 DERLLRTFDIDRLAAALHPE----RDRRFTFLGLQTLYDRYLLHEPEGRRFELPQYLWMR 290
Query: 174 VSIGI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
V++G+ D AI+ Y ++S F +++PTLFNAGTP PQLSSC+L ++DD +
Sbjct: 291 VAMGLALAEDDPTARAIQFYELLSSFRFMNSTPTLFNAGTPHPQLSSCYLTTVQDD-LGA 349
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I++ +++ A++SK AGG+G +RA G++IRGTNG S G++P L++ NDTA V+QGG
Sbjct: 350 IFKAIRDNALLSKWAGGLGNDWTPVRALGAHIRGTNGRSQGVIPFLKIVNDTAVAVNQGG 409
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KRKGA YLE WH DI EFL L++N G E R D+ A W+PDLFM+RV+ W+L
Sbjct: 410 -KRKGAVCAYLEVWHLDIEEFLELRRNTGDERRRTHDMNTACWIPDLFMQRVRERKHWTL 468
Query: 351 FCPNEASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIETGTPYM 405
F P+E L D +G F + Y HYERE +A ++ ++A LW ++L+ ETG P++
Sbjct: 469 FSPDEVPDLHDLYGRAFRERYEHYEREAEAGRIRNWRRIEAVALWRKMLSMLFETGHPWL 528
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
FKD CN +S Q ++G + SSNLCTEI TSP E AVCNL SI L V E+
Sbjct: 529 TFKDPCNIRSPQDHVGVVHSSNLCTEITLNTSPEEVAVCNLGSINLVAHVDEQGE----- 583
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
D EKL + L+ +ID+N+YP+ AR SNLRHRPIG+G+
Sbjct: 584 --------------LDREKLRDTIRTAVRMLDNVIDLNFYPIPEARTSNLRHRPIGLGLM 629
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
G D G+++ S A +L + E I Y A + SS++AA+ G Y T+ S +G+L
Sbjct: 630 GFQDVLYRRGLSYASEAAVELADEFMEFIAYCAYEASSDLAAERGAYPTFKGSKWDRGLL 689
Query: 586 --------QPDMWNVIP---SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
+ + +P + R DW LR+ I + G+RNS ++A PTA+ + I G +
Sbjct: 690 PLDTLDLLEAERGEPVPVPRTARLDWDALREKIRRQGMRNSNVLAIAPTATIANICGVSP 749
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
EP N+Y + LSGEF +N +L+ DL G+W + + + Y DGSVQ+I IP E
Sbjct: 750 SIEPTYKNLYVKSNLSGEFTQLNPYLVRDLKARGLWDKEMLDDLKYYDGSVQEIDRIPPE 809
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
LK Y+T +EI+ L++ A R +IDQSQSLN+++ +P+ +K++ ++ W GLKT
Sbjct: 810 LKARYRTAFEIEPRWLIECAARRQKWIDQSQSLNLYLAEPSGRKLSEMYQLAWQLGLKT- 868
Query: 755 MYYLRSRAAADAIKFTVD 772
YYLR+ AA K T+D
Sbjct: 869 TYYLRALAATQIEKSTLD 886
>gi|167904348|ref|ZP_02491553.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei NCTC 13177]
Length = 956
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 313/805 (38%), Positives = 436/805 (54%), Gaps = 54/805 (6%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V +G + + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRTLDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ D + + +K L + RD + Y G +TL Y L V G +E PQ MRV+
Sbjct: 273 LDDKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P+ L D +GAEFE Y YE E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVESHP 466
KD CN +S QQ++G + SSNLCTEI TS TE AVCNL S+ L ++ D
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLVAHLAKQAD------- 620
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
GS D EKL ++ L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 621 ----GSYA-----LDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMG 671
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D LL + S EA + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 672 FQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILP 731
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ R DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 732 QDTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSAC 791
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF VVN++L+ DL E G+W + + Y DG + +I IP +L
Sbjct: 792 IEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADL 851
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + KK+ ++ W RGLKT
Sbjct: 852 RAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-T 910
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ AA K TV P
Sbjct: 911 YYLRTMAATHVEKSTVAHGALNAVP 935
>gi|54294661|ref|YP_127076.1| ribonucleotide-diphosphate reductase subunit alpha [Legionella
pneumophila str. Lens]
gi|53754493|emb|CAH15977.1| hypothetical protein lpl1738 [Legionella pneumophila str. Lens]
Length = 942
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 317/840 (37%), Positives = 456/840 (54%), Gaps = 71/840 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + +G + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARI--------AVSNLHKNTKKSFSET--IKDMYNHYNERSG 110
+A A+ P+Y ++AR+ A++ L+ ++ +F E I +Y G
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 111 LKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHM 170
+ ++ + + + L ++ +RD + Y +TL Y + +G E PQ
Sbjct: 260 IAQGMLDPKMTDFDLDK---LSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAF 316
Query: 171 LMRVSIGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
MRV++G+ HK++ AI+ Y ++S + ++PTLFN+GT RPQLSSC+L + D
Sbjct: 317 FMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD 374
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V + TA
Sbjct: 375 -HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVA 433
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
V+QGG KRKGA YLE WH D+ EFL L+KN G + R D+ ALWVPDLFM+RV+ +
Sbjct: 434 VNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVRED 492
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYE---REG--KAKKVVQAQNLWFEILTSQIET 400
G W+LF P+E L D +G FE LY YE R+G + K + A LW +L+ ET
Sbjct: 493 GNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTIPAVKLWRRMLSMLFET 552
Query: 401 GTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDV 460
G P++ FKD CN +S QQ+ G I SSNLCTEI TS E AVCNL SI LP +
Sbjct: 553 GHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI----- 607
Query: 461 PVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
KN D +KL + L+ +ID+NYY V AR SNL+HRPI
Sbjct: 608 ---------------KNGKLDEQKLKRTISTAIRMLDNVIDINYYSVPQARNSNLQHRPI 652
Query: 521 GIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPV 580
G+G+ G D L M + S EA + E I Y+A++ S ++A + G Y TY S
Sbjct: 653 GLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLW 712
Query: 581 SKGILQPDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQI 629
SKGIL D N++ S + DW LR + G+RNS ++A PTA+ S I
Sbjct: 713 SKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNI 772
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIP 689
G ++ EP N+Y + LSGEF VVN +L+ DL + +W + N + Y +GSVQ I
Sbjct: 773 CGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKTLNLWDEVMVNDLKYFNGSVQPIS 832
Query: 690 EIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSR 749
IPEELK Y T +EI M LV+ A R +IDQ+QSLNI+M QP+ KK+ L+ W R
Sbjct: 833 RIPEELKSRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIR 892
Query: 750 GLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
GLKT YYLRS A++A K TV ++D E K CS+T+ +C AC
Sbjct: 893 GLKT-TYYLRSLGASNAEKSTVTDGALNAVK-----LIDTEPK----ACSITD-PDCEAC 941
>gi|381153010|ref|ZP_09864879.1| ribonucleoside-diphosphate reductase, alpha subunit
[Methylomicrobium album BG8]
gi|380884982|gb|EIC30859.1| ribonucleoside-diphosphate reductase, alpha subunit
[Methylomicrobium album BG8]
Length = 935
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 312/830 (37%), Positives = 451/830 (54%), Gaps = 68/830 (8%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V G + + A ++ GLS D V + +Y G+ + + +
Sbjct: 149 VDDGGHRRPLDSSAFIALCREACTGLS--DVDAERVWAQTLPNLYDGMPLAAVRQALVLA 206
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKDMYNHYNERSGLKAPLIA 117
A + PDYA +AAR+ +SNL + T+ +E D + + +G+ A L+
Sbjct: 207 ARTLIEAEPDYAKVAARLLLSNLRQEATGQPLTQADMAERYADCFAEFLA-AGVAAELLD 265
Query: 118 DDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIG 177
+ E + L + +RD +DY G +TL Y L V+G+ +E PQ MRV++G
Sbjct: 266 KRLLEFDLPR---LGRALQAERDLQFDYLGLQTLYDRYFLNVEGRRIELPQCFFMRVAMG 322
Query: 178 IHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ ++ID AI+ Y ++S F ++PTLFN+GT PQLSSC+L + DD ++GIY++
Sbjct: 323 LALNEIDRETKAIEFYQVLSSFDFMCSTPTLFNSGTRHPQLSSCYLTTVSDD-LDGIYQS 381
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A++ K AGG+G +RA GS I+GTNG S G++P L+V NDTA V+QGG KRK
Sbjct: 382 IKENALLQKYAGGLGNDWTPVRALGSRIKGTNGHSQGVIPFLKVVNDTAVAVNQGG-KRK 440
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA YLE WH D EFL L+KN G E RA D+ A WV DLFM+RV++NG W+LF P
Sbjct: 441 GAVCAYLENWHLDFEEFLELRKNTGDERRRAHDMNTAAWVSDLFMQRVRSNGDWTLFSPV 500
Query: 355 EASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
+ L D +G F + Y YE E K K V A LW ++LT ETG P++ FKD
Sbjct: 501 DVPDLHDLYGGAFAEAYQAYEAKAERGEIKLYKRVGAVQLWRKMLTMLFETGHPWITFKD 560
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ+ G I SSNLCTEI TS ETAVCNL S+ LP + E+D +
Sbjct: 561 ACNLRSPQQHAGVIHSSNLCTEITLNTSADETAVCNLGSVNLPAHLVERDGVWQ------ 614
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
D +KL A L+ +ID+N+Y AR +NLRHRP+G+G+ G +D
Sbjct: 615 ----------LDADKLQRTIATAMRMLDNVIDINFYATVKARNANLRHRPVGLGMMGFSD 664
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
LG+++ SPEA + E + Y+A + S+++A + G Y ++ S +G+L PD
Sbjct: 665 CLHKLGVSYASPEALEFADRSAEMLCYYAYRASADLAEQRGRYSSFVGSLWQQGVLPPDT 724
Query: 590 W----------NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
V S + DW LR+ I++ G+RNS VA PTA+ + I+G + EP
Sbjct: 725 LARLIETRGDLGVAASGQLDWHALRERIAQVGMRNSNCVAIAPTATIANIVGVSASIEPV 784
Query: 640 TSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIY 699
N+Y + LSGEF VVN L+ +L + +W + + Y DGS+ I +PE +K Y
Sbjct: 785 YQNLYVKSNLSGEFTVVNAALVRELKALDLWDAVMVADLKYFDGSLAAIERVPETIKARY 844
Query: 700 KTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLR 759
T +EI+ L++ A R +IDQSQSLN+++ P K+ L+ W RGLKT YYLR
Sbjct: 845 ATAFEIEPEWLIEAAARRQKWIDQSQSLNLYVAAPTGSKLDRLYRLAWQRGLKT-TYYLR 903
Query: 760 SRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
+ A T++ K D + A VCS+T+ +C AC
Sbjct: 904 TLGA---------TAMEK---------TGDGGEPAAKVCSITD-PDCEAC 934
>gi|339327268|ref|YP_004686961.1| ribonucleoside-diphosphate reductase subunit alpha [Cupriavidus
necator N-1]
gi|338167425|gb|AEI78480.1| ribonucleoside-diphosphate reductase subunit alpha [Cupriavidus
necator N-1]
Length = 977
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 304/763 (39%), Positives = 429/763 (56%), Gaps = 49/763 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN---- 89
+P+L ++ +Y GV +Q+ + A A + PDY+ + ARI + + K
Sbjct: 187 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGT 244
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFG 147
T+ S + + + R G++A L+ + ++ + A L + + RDF ++Y G
Sbjct: 245 EVTQAEMSSRYAEYFPKFIAR-GIQAELLDE---QLATYDLARLGAALDAGRDFQFNYLG 300
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVSIGI---HKDDIDSAIKTYHMMSQRWFTHASPT 204
+TL Y L + +E PQ MRV++G+ KD AI+ Y ++S F ++PT
Sbjct: 301 LQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEKDREARAIEFYQLLSSFDFMSSTPT 360
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R QLSSC+L + DD +EGIYE LKE A++SK AGG+G N+RA GS+I+G
Sbjct: 361 LFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 419
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R
Sbjct: 420 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 478
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGK 379
D+ A W+PDLFM+RV G+W+LF P L D G EFEK Y YE E K
Sbjct: 479 THDMNTANWIPDLFMKRVMEAGEWTLFSPATCPDLHDKVGKEFEKAYLGYEAKAASGELK 538
Query: 380 AKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+ +
Sbjct: 539 LFKKLPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNES 598
Query: 440 ETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKI 499
E AVCNL S+ L +H ++ + D KL + L+ +
Sbjct: 599 EIAVCNLGSVNLV-----------AHMTK----QADGTYALDHAKLQKTVRTAMRMLDNV 643
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHAL 559
ID+NYY V+ AR SNLRHRP+G+G+ G D +L + S A + E + Y+A
Sbjct: 644 IDINYYAVDKARNSNLRHRPVGMGIMGFQDCLHVLRTPYSSDAAVKFADTSMEAVCYYAY 703
Query: 560 KTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMIS 608
K S+E+A + G Y TY S +GIL D ++ +R DW LR I
Sbjct: 704 KASTELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLDVDLSSTMDWDALRARIK 763
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E G
Sbjct: 764 QHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKERG 823
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+W + + Y DGS+ +I IP++L+ IY T +E++ LV+ A R +IDQ+QSLN
Sbjct: 824 LWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQSLN 883
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
I+M + KK+ + W RGLKT YYLR+ AA K TV
Sbjct: 884 IYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTV 925
>gi|348617977|ref|ZP_08884510.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Candidatus Glomeribacter gigasporarum BEG34]
gi|347816682|emb|CCD29168.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Candidatus Glomeribacter gigasporarum BEG34]
Length = 950
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 314/831 (37%), Positives = 448/831 (53%), Gaps = 54/831 (6%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DG + + D +TA + + GL P + ++ +Y+G Q+ + A A
Sbjct: 145 DGVRRPLDLDALTALIAQACEGLGAA-VKPEPIIEQTLKNLYEGAPLKQIYDSAILAART 203
Query: 67 MTTNHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAPLIADDIY 121
+ P Y+ AARI + L + K+ + Y Y + G++A L+ + +
Sbjct: 204 LIEQEPAYSRAAARILLHILRREALGKEVTHAQMAARYARYFPVFVQRGVRAGLLDEKLL 263
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+ + A L ++ RD + Y G +TL Y L + G +E PQ LMRV++G+ +
Sbjct: 264 QF---DLAMLGQALVAARDLQFSYLGLQTLYDRYFLHIDGARLELPQTFLMRVAMGLALN 320
Query: 182 DIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
+ D A++ YH++S+ F ++PTLFNAGT R QLSSC+L + DD +EGIYE LKE
Sbjct: 321 EADRNARAVEFYHLLSRFDFMSSTPTLFNAGTRRSQLSSCYLTTVADD-LEGIYEALKEN 379
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 380 ALLSKFAGGLGNDWTRVRALGAHIQGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVC 438
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
YLE WH DI EFL L+KN G + RA D+ A W+PDLFM+RV + QW+LF P++
Sbjct: 439 AYLETWHLDIEEFLELRKNTGDDRRRAHDMNTANWIPDLFMKRVLADAQWTLFSPSDCPD 498
Query: 359 LADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNR 413
L + +GA+FE Y YE E K K + A LW ++L ETG P++ FKD CN
Sbjct: 499 LHEKYGADFEAAYLDYEEKAARGEIKLFKKMPAAQLWRKMLGMLFETGHPWVTFKDPCNI 558
Query: 414 KSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSR 473
+S QQ++G + SSNLCTEI T+ +E AVCNL SI L +R D
Sbjct: 559 RSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSINLVAHLRAAD-------------N 605
Query: 474 GSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
G+ D +KL + L+ +ID+NYY V AR SNL+HRP+G+G+ G D
Sbjct: 606 GALR--LDHDKLKKTIQTALRMLDNVIDINYYAVAKARDSNLKHRPVGLGIMGFQDCLHA 663
Query: 534 LGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVI 593
L + + S A + E + Y+A S+E+A + G Y +Y S S+GIL D ++
Sbjct: 664 LRIPYASEVAVEFADRSMEAVCYYAYWASTELAQERGRYSSYDGSLWSRGILPQDTLALL 723
Query: 594 PSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
R DW LR I++ G+RNS VA PTA+ S I+G + C EP N
Sbjct: 724 AQARGGHVEVDESGTLDWEALRRRIARYGMRNSNCVAIAPTATISNIVGVSACIEPTYQN 783
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTV 702
++ + LSGEF VVN++L+ DL +W + + Y DG + +I +P +L+ +Y T
Sbjct: 784 LFVKSNLSGEFTVVNEYLVRDLKARDLWDAVMIADLKYFDGMLARIDRVPADLRDLYATA 843
Query: 703 WEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRA 762
+EI LV+ A R +IDQSQSLNI+M + KK+ ++ W RGLKT YYLR+ A
Sbjct: 844 FEIDPKWLVEAAARRQKWIDQSQSLNIYMAGASGKKLDEIYRLAWRRGLKT-TYYLRTMA 902
Query: 763 AADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSL----TNREECMAC 809
A K TV E A VC+L N E C C
Sbjct: 903 ATHIEKSTVAHGALNAVAMSSE----SSAHSAPQVCALRPDDVNFEACEVC 949
>gi|421809628|ref|ZP_16245461.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC035]
gi|410413988|gb|EKP65795.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC035]
Length = 943
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 317/851 (37%), Positives = 463/851 (54%), Gaps = 72/851 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLKFDLEKLA---AAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK----------------EKPEKPELVVDDETKMAQVV---C 798
LR+ A A K T++T + +KPE V +D A V C
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMAC 932
Query: 799 SLTNREECMAC 809
S+ N +C AC
Sbjct: 933 SIDN-PDCEAC 942
>gi|309783063|ref|ZP_07677782.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_7_47FAA]
gi|404397127|ref|ZP_10988920.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_2_56FAA]
gi|308918171|gb|EFP63849.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_7_47FAA]
gi|348610686|gb|EGY60372.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_2_56FAA]
Length = 994
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 303/767 (39%), Positives = 430/767 (56%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
E DP + ++ +Y+GV +Q+ + A + + P Y+ + ARI + + +
Sbjct: 184 EAVDPEPILKETVKNLYEGVPMTQVYDSAILASRTLIEKDPAYSQVTARILLHTIRREIL 243
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ S D + + ER G+ A L+ D + + + + A LD+ RDF ++
Sbjct: 244 GEEVTQAEMSTRYVDYFPQFIER-GINAELLDDKLAQFDLARLGAALDAS----RDFQFN 298
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + +E PQ MRV++G+ ++ID AI+ Y ++S F +
Sbjct: 299 YLGLQTLYDRYFLHINETRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSS 358
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 359 TPTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 417
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 418 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 476
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV G+W+LF P+ L D G FE+ Y YE
Sbjct: 477 RRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEQAYLAYEDKVARG 536
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 537 EIKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 596
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L V++ D V D EKL +
Sbjct: 597 NDSEIAVCNLGSVNLVAHLVKQPDGSV----------------VLDHEKLKKTVRTAMRM 640
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D +L + + S A Q E +
Sbjct: 641 LDNVIDINYYAVKKARDSNLRHRPVGMGIMGFQDALHVLRVPYASEAAVQFADTSMEAVC 700
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y +Y S +GIL D ++ +R DW LR
Sbjct: 701 YYAYWASTELAEERGRYSSYKGSLWDRGILPQDSLKLLAEERGGYLEADMSSTMDWDSLR 760
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 761 GRIKQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 820
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+
Sbjct: 821 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQA 880
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + KK+ + W RGLKT YYLR+ A K TV
Sbjct: 881 QSLNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 926
>gi|406035942|ref|ZP_11043306.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
parvus DSM 16617 = CIP 108168]
Length = 944
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 315/851 (37%), Positives = 461/851 (54%), Gaps = 71/851 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + +G+ + + +TA ++ S GL E D + + +Y GV S +
Sbjct: 122 LQITDANGQLQPLDLSALTATIETASAGL--EGIDVQAIVDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNE---RSGLKAPLIA 117
P+Y + AR+ + L + + + + E + G++ L++
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLCNELVGTGLEFLGLSTDTLESDALEPFLKKGIELDLLS 239
Query: 118 DDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIG 177
D+ + A L + I +R + Y G +TL Y + G E PQ MRVS+G
Sbjct: 240 PDLLNF---DLAKLSAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSMG 296
Query: 178 I---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ ++ D AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 297 LALNEENKEDRAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYGA 355
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 356 MRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KRK 414
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV + +W+LF P+
Sbjct: 415 GAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDAEWTLFTPS 474
Query: 355 EASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKDT 410
E L D GAEF + YTHYE K + K ++A++LW ++L+ ETG P++ FKD
Sbjct: 475 ETPDLHDLTGAEFAERYTHYEAVAKEQNMLHKKIRAKDLWRKMLSMLFETGHPWITFKDV 534
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIV 470
CN +S QQ++G + SSNLCTEI TS E AVCNL SI L + V
Sbjct: 535 CNLRSPQQHVGVVHSSNLCTEITLNTSQDEIAVCNLGSINLVQHV--------------- 579
Query: 471 GSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
+ D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 -----QGGVLDREKLARTIKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQDA 634
Query: 531 FILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD-- 588
+G+A+ S A + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 635 LYEMGIAYGSDAAVDFADESMEVISYYAIQTSSDLALERGAYSTFKGSLWDQGILPIDSL 694
Query: 589 ----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ EP
Sbjct: 695 ELVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIEP 754
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK I
Sbjct: 755 TFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKAI 814
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
+ T +E+ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YYL
Sbjct: 815 FATAFEVDTRWIVDAASRRQKWIDQAQSLNLYIAGANGKKLDITYKMAWLRGLKT-TYYL 873
Query: 759 RSRAAADAIKFTVDTSVFKE-KP----------------EKPELVVDDETKMAQVV---C 798
R+ A A K T++T KP +KP++ V+++ A V C
Sbjct: 874 RALGATSAEKSTINTGALNAVKPASVEAPVVAAQAVVVEKKPDVQVEEDFATAAPVPLAC 933
Query: 799 SLTNREECMAC 809
S+ N +C AC
Sbjct: 934 SIDN-PDCEAC 943
>gi|169797063|ref|YP_001714856.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AYE]
gi|184157024|ref|YP_001845363.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ACICU]
gi|213156531|ref|YP_002318192.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB0057]
gi|215484524|ref|YP_002326759.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii AB307-0294]
gi|239501300|ref|ZP_04660610.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB900]
gi|260555645|ref|ZP_05827865.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|301345631|ref|ZP_07226372.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB056]
gi|301512782|ref|ZP_07238019.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB058]
gi|301596293|ref|ZP_07241301.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB059]
gi|332852153|ref|ZP_08433980.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6013150]
gi|332867552|ref|ZP_08437705.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6013113]
gi|332872598|ref|ZP_08440566.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6014059]
gi|384130703|ref|YP_005513315.1| nrdA [Acinetobacter baumannii 1656-2]
gi|384141990|ref|YP_005524700.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
baumannii MDR-ZJ06]
gi|385236292|ref|YP_005797631.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii TCDC-AB0715]
gi|387125061|ref|YP_006290943.1| ribonucleoside-diphosphate reductase,
adenosylcobalamin-dependent/ribonucleoside-diphosphate
reductase, alpha subunit [Acinetobacter baumannii
MDR-TJ]
gi|403673287|ref|ZP_10935588.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
sp. NCTC 10304]
gi|407931630|ref|YP_006847273.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii TYTH-1]
gi|416145354|ref|ZP_11600393.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB210]
gi|417544082|ref|ZP_12195168.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC032]
gi|417548718|ref|ZP_12199799.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-18]
gi|417553465|ref|ZP_12204534.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-81]
gi|417560452|ref|ZP_12211331.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC137]
gi|417565176|ref|ZP_12216050.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC143]
gi|417570545|ref|ZP_12221402.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC189]
gi|417573131|ref|ZP_12223985.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Canada BC-5]
gi|417577645|ref|ZP_12228490.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-17]
gi|417870671|ref|ZP_12515626.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH1]
gi|417872421|ref|ZP_12517323.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH2]
gi|417876818|ref|ZP_12521568.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH3]
gi|417881621|ref|ZP_12525934.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH4]
gi|421201407|ref|ZP_15658566.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC109]
gi|421204645|ref|ZP_15661763.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AC12]
gi|421456517|ref|ZP_15905859.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-123]
gi|421534674|ref|ZP_15980945.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AC30]
gi|421621934|ref|ZP_16062845.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC074]
gi|421625034|ref|ZP_16065890.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC098]
gi|421627999|ref|ZP_16068785.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC180]
gi|421632724|ref|ZP_16073371.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-13]
gi|421642485|ref|ZP_16083001.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-235]
gi|421649045|ref|ZP_16089441.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-251]
gi|421655829|ref|ZP_16096143.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-72]
gi|421659041|ref|ZP_16099267.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-83]
gi|421667566|ref|ZP_16107632.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC087]
gi|421670410|ref|ZP_16110408.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC099]
gi|421675150|ref|ZP_16115075.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC065]
gi|421677163|ref|ZP_16117056.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC111]
gi|421686844|ref|ZP_16126588.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-143]
gi|421692756|ref|ZP_16132406.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-116]
gi|421696464|ref|ZP_16136050.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-692]
gi|421699198|ref|ZP_16138733.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-58]
gi|421702437|ref|ZP_16141919.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ZWS1122]
gi|421706175|ref|ZP_16145593.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ZWS1219]
gi|421788140|ref|ZP_16224450.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-82]
gi|421792968|ref|ZP_16229106.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-2]
gi|421795235|ref|ZP_16231319.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-21]
gi|421799027|ref|ZP_16235035.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Canada BC1]
gi|421803401|ref|ZP_16239319.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-A-694]
gi|424053542|ref|ZP_17791074.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab11111]
gi|424061002|ref|ZP_17798493.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab33333]
gi|424062801|ref|ZP_17800286.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab44444]
gi|425752584|ref|ZP_18870491.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-113]
gi|445449207|ref|ZP_21444202.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-A-92]
gi|445468731|ref|ZP_21450944.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC338]
gi|445480431|ref|ZP_21455506.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-78]
gi|169149990|emb|CAM87884.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
baumannii AYE]
gi|183208618|gb|ACC56016.1| Ribonucleotide reductase, alpha subunit [Acinetobacter baumannii
ACICU]
gi|193076531|gb|ABO11187.2| ribonucleoside diphosphate reductase alpha subunit [Acinetobacter
baumannii ATCC 17978]
gi|213055691|gb|ACJ40593.1| ribonucleoside-diphosphate reductase alpha subunit [Acinetobacter
baumannii AB0057]
gi|213986949|gb|ACJ57248.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii AB307-0294]
gi|260410556|gb|EEX03854.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|322506923|gb|ADX02377.1| nrdA [Acinetobacter baumannii 1656-2]
gi|323516790|gb|ADX91171.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii TCDC-AB0715]
gi|332729525|gb|EGJ60864.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6013150]
gi|332733969|gb|EGJ65114.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6013113]
gi|332739127|gb|EGJ69986.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6014059]
gi|333366900|gb|EGK48914.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB210]
gi|342227413|gb|EGT92347.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH1]
gi|342233591|gb|EGT98307.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH2]
gi|342236993|gb|EGU01488.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH3]
gi|342238680|gb|EGU03108.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH4]
gi|347592483|gb|AEP05204.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
baumannii MDR-ZJ06]
gi|385879553|gb|AFI96648.1| ribonucleoside-diphosphate reductase,
adenosylcobalamin-dependent/ribonucleoside-diphosphate
reductase, alpha subunit [Acinetobacter baumannii
MDR-TJ]
gi|395523034|gb|EJG11123.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC137]
gi|395550993|gb|EJG17002.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC189]
gi|395556932|gb|EJG22933.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC143]
gi|395563439|gb|EJG25092.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC109]
gi|395570866|gb|EJG31528.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-17]
gi|398325798|gb|EJN41958.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AC12]
gi|400208699|gb|EJO39669.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Canada BC-5]
gi|400210945|gb|EJO41909.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-123]
gi|400381970|gb|EJP40648.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC032]
gi|400389017|gb|EJP52089.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-18]
gi|400389882|gb|EJP56929.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-81]
gi|404559401|gb|EKA64658.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-116]
gi|404561644|gb|EKA66870.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-692]
gi|404567307|gb|EKA72433.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-143]
gi|404571825|gb|EKA76874.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-58]
gi|404667680|gb|EKB35593.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab11111]
gi|404668954|gb|EKB36863.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab33333]
gi|404675171|gb|EKB42887.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab44444]
gi|407194179|gb|EKE65323.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ZWS1122]
gi|407194607|gb|EKE65746.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ZWS1219]
gi|407900211|gb|AFU37042.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii TYTH-1]
gi|408506852|gb|EKK08556.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-72]
gi|408513212|gb|EKK14846.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-235]
gi|408514294|gb|EKK15901.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-251]
gi|408696697|gb|EKL42226.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC074]
gi|408699459|gb|EKL44935.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC098]
gi|408708432|gb|EKL53706.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-13]
gi|408708520|gb|EKL53793.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC180]
gi|408708980|gb|EKL54242.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-83]
gi|409987340|gb|EKO43522.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AC30]
gi|410382697|gb|EKP35236.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC065]
gi|410383746|gb|EKP36266.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC087]
gi|410385089|gb|EKP37584.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC099]
gi|410393441|gb|EKP45794.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC111]
gi|410398228|gb|EKP50450.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-2]
gi|410402122|gb|EKP54251.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-21]
gi|410403711|gb|EKP55789.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-82]
gi|410411238|gb|EKP63118.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Canada BC1]
gi|410412992|gb|EKP64836.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-A-694]
gi|425498815|gb|EKU64881.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-113]
gi|444756950|gb|ELW81486.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-A-92]
gi|444771447|gb|ELW95576.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-78]
gi|444774966|gb|ELW99037.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC338]
gi|452948351|gb|EME53830.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii MSP4-16]
Length = 944
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 317/852 (37%), Positives = 463/852 (54%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLKFDLEKLA---AAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK-----------------EKPEKPELVVDDETKMAQVV--- 797
LR+ A A K T++T + +KPE V +D A V
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 932
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|187930115|ref|YP_001900602.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
pickettii 12J]
gi|187727005|gb|ACD28170.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12J]
Length = 994
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 302/767 (39%), Positives = 431/767 (56%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
E DP + ++ +Y+GV +Q+ + A + + P Y+ + ARI + + +
Sbjct: 184 EAVDPEPILKETVKNLYEGVPMTQVYDSAILASRTLIEKDPAYSQVTARILLHTIRREIL 243
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ S D + + +R G+ A L+ D + + + + A LD+ RDF ++
Sbjct: 244 GEEVTQAEMSTRYVDYFPQFIKR-GINAELLDDKLAQFDLARLGAALDAS----RDFQFN 298
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + +E PQ MRV++G+ ++ID AI+ Y ++S F +
Sbjct: 299 YLGLQTLYDRYFLHISETRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSS 358
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 359 TPTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 417
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 418 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 476
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV G+W+LF P+ L D G FE+ Y YE
Sbjct: 477 RRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEQAYLAYEDKVARG 536
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 537 EIKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 596
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L V++ D V D EKL +
Sbjct: 597 NDSEIAVCNLGSVNLVAHLVKQADGSV----------------VLDHEKLKKTVRTAMRM 640
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D +L + + S A Q E +
Sbjct: 641 LDNVIDINYYAVKKARDSNLRHRPVGMGIMGFQDALHVLRVPYASDAAVQFADTSMEAVC 700
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y +Y S +GIL D ++ +R DW LR
Sbjct: 701 YYAYWASTELAEERGRYSSYKGSLWDRGILPQDSLKLLAEERGGYLEADMSSTMDWDSLR 760
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 761 GRIKQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 820
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ + LV+ A R +IDQ+
Sbjct: 821 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPLWLVEAASRRQKWIDQA 880
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + KK+ + W RGLKT YYLR+ A K TV
Sbjct: 881 QSLNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 926
>gi|83746811|ref|ZP_00943859.1| Ribonucleoside-diphosphate reductase alpha chain [Ralstonia
solanacearum UW551]
gi|207744362|ref|YP_002260754.1| ribonucleoside reductase 1 (large chain) (partial sequence n
terminus) protein [Ralstonia solanacearum IPO1609]
gi|83726580|gb|EAP73710.1| Ribonucleoside-diphosphate reductase alpha chain [Ralstonia
solanacearum UW551]
gi|206595767|emb|CAQ62694.1| ribonucleoside reductase 1 (large chain) (partial sequence n
terminus) protein [Ralstonia solanacearum IPO1609]
Length = 987
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 305/767 (39%), Positives = 431/767 (56%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
+ DP + ++ +Y+GV SQ+ + A A + P Y+ ARI + + +
Sbjct: 180 DAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ + D + + +R G+ A L+ D + + + K A LD+ RD ++
Sbjct: 240 GEEVTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + K +E PQ MRV++G+ ++ID AI+ YH++S F +
Sbjct: 295 YLGLQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYHLLSSFDFMSS 354
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV NG+W+LF P+ L D G FE+ Y YE
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARG 532
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 533 EITLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L V++ D GS D +KL + I
Sbjct: 593 NDSEIAVCNLGSVNLVAHLVQQAD-----------GSYA-----LDHDKLKKTVRIAMRM 636
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+GV G D +L + + + A Q E +
Sbjct: 637 LDNVIDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANEAAVQFADTSMEAVC 696
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y TY S +GIL D ++ +R DW LR
Sbjct: 697 YYAYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSTMDWDSLR 756
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 757 GRIQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 816
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+
Sbjct: 817 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQA 876
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + K + + W RGLKT YYLR+ A K TV
Sbjct: 877 QSLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 922
>gi|169634185|ref|YP_001707921.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii SDF]
gi|169152977|emb|CAP02025.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
baumannii]
Length = 943
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 319/851 (37%), Positives = 464/851 (54%), Gaps = 72/851 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLKFDLEKLA---AAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVKFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N L+ L E G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPCLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFKE-KP---------------EKPELVVDDETKMAQVV---C 798
LR+ A A K T++T KP +KPE V +D A V C
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAPAVAPVVEAKKPEAVEEDGFTQAAPVPMAC 932
Query: 799 SLTNREECMAC 809
S+ N +C AC
Sbjct: 933 SIDN-PDCEAC 942
>gi|335042801|ref|ZP_08535828.1| ribonucleotide reductase, alpha subunit [Methylophaga
aminisulfidivorans MP]
gi|333789415|gb|EGL55297.1| ribonucleotide reductase, alpha subunit [Methylophaga
aminisulfidivorans MP]
Length = 1009
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 302/819 (36%), Positives = 458/819 (55%), Gaps = 59/819 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V+ DG + + D++ + + GL+ + D +L + ++ GV + +++
Sbjct: 177 LHVIAADGSRHPLDIDRLHNLITEACEGLAEVNRDAIL--RDTQRNLFDGVKEADVEKAL 234
Query: 61 AETAAAMTTNHPDYASLAARI--------AVSNLHKNTKKSFSETIKDMYNHYNE---RS 109
+A P Y++LAAR+ A+S ++K K++ + D+Y Y + +
Sbjct: 235 VMSARTFIEKDPAYSTLAARLLMDGIRREALSFVYKTPKQASQNEMGDLYADYFKTYIST 294
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
++ LI E+ + + L + + + DF++ Y G +TL Y + G E PQ
Sbjct: 295 AIEKELIDS---ELGLFDLDRLGNALKPELDFEFTYLGLQTLYDRYFIHFDGTRFELPQA 351
Query: 170 MLMRVSIGIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDD 226
MRV++G+ +++ + AI+ Y+++S F ++PTLFN+GT RPQLSSC+L + DD
Sbjct: 352 FYMRVAMGLAINELNREERAIEFYNLLSSFDFMSSTPTLFNSGTLRPQLSSCYLTTVPDD 411
Query: 227 SIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYV 286
+ GIY +++ A++SK AGG+G +R G++I+GTNG S G+VP L+V NDTA V
Sbjct: 412 -LSGIYNAMRDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGKSQGVVPFLKVANDTAVAV 470
Query: 287 DQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNG 346
+QGG KRKGA YLE WH D+ EFL+L+KN G + R D+ A W+PDLFM+RV G
Sbjct: 471 NQGG-KRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVAEEG 529
Query: 347 QWSLFCPNEASGLADCWGAEFEKLYTHYEREG-----KAKKVVQAQNLWFEILTSQIETG 401
QW+LF P E L D G +FE+ Y YE + + K + A +LW ++L ETG
Sbjct: 530 QWTLFSPEEVEDLHDLTGLDFERAYEAYEEKAARGDIRNFKQLPATDLWRKMLGMLFETG 589
Query: 402 TPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVP 461
P++ FKD CN +S QQ++G + SSNLCTEI TS E AVCNL S+ + + + E
Sbjct: 590 HPWITFKDPCNLRSPQQHVGVVHSSNLCTEITLNTSDKEIAVCNLGSVNMVKHIDE---- 645
Query: 462 VESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIG 521
N D EKL + L+ +I+ NYY V AR SNL+HRP+G
Sbjct: 646 ---------------NGKLDKEKLQKTVRTAMRMLDNVIEYNYYSVPQARHSNLQHRPVG 690
Query: 522 IGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVS 581
+G+ G D L + + S EA Q + E I Y+A++ SS++AA+ G Y+TY S S
Sbjct: 691 LGLMGFQDALYKLRIPYSSDEAVQFADESMEAISYYAIEASSDLAAERGKYQTYEGSLWS 750
Query: 582 KGILQPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQIL 630
KGIL D ++ R DW +LRD I + G+RNS +A PTA+ S I
Sbjct: 751 KGILPIDSIKLLKEARGEYLQQDESKTMDWDMLRDKIKRQGMRNSNTMAIAPTATISNIC 810
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPE 690
G ++ EP N++ + LSGEF V+N +++ DL +W + N + Y DGS+Q I
Sbjct: 811 GVSQSIEPTYQNLFVKSNLSGEFTVINPYMVEDLKARNLWDDVMINDLKYFDGSLQGIDR 870
Query: 691 IPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRG 750
IP ELK +Y T +E+ L++ A R ++DQ+QSLN++M +P+ KK+ +L+ W RG
Sbjct: 871 IPAELKSLYTTAFEMDARWLIEAASRRQKWLDQAQSLNLYMAEPSGKKMDNLYKLAWVRG 930
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVFKE--KPEKPELVV 787
LKT YYLRS A A K + + E P KP+ V
Sbjct: 931 LKT-TYYLRSMGATGAEKTSTAPTTATEAPAPSKPKPVA 968
>gi|388456663|ref|ZP_10138958.1| ribonucleotide-diphosphate reductase subunit alpha [Fluoribacter
dumoffii Tex-KL]
Length = 941
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/808 (38%), Positives = 437/808 (54%), Gaps = 67/808 (8%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI--------AV 83
EH V + +Y + + A + P+Y ++AR+ A+
Sbjct: 170 EHVQAEPVIKDAMRNLYNQAKFEDVHKALIMAARTLVEKEPNYTYVSARLLLDSLRMEAL 229
Query: 84 SNLHKNTKKSFSETIKDMYNHYNE---RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRD 140
S L + +F E + +Y Y + G+K ++ + + ++ L ++ +RD
Sbjct: 230 SKLEIQSDATFDE-MSALYPSYFKLYIAHGIKQGMLDAKMADFDLEK---LGKALLPERD 285
Query: 141 FDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI---HKDDIDSAIKTYHMMSQRW 197
+ Y +TL Y + G E PQ MRV++G+ KD D AI+ Y ++S
Sbjct: 286 MKFSYLSLQTLYDRYFIHEHGVRYELPQAFFMRVAMGLALREKDKEDKAIEFYQLLSSFD 345
Query: 198 FTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRA 257
+ ++PTLFN+GT RPQLSSC+L + D ++GIY +K+ A++SK AGG+G +RA
Sbjct: 346 YMSSTPTLFNSGTIRPQLSSCYLTTVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVRA 404
Query: 258 TGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKN 317
GS+I+GTNG S G+VP L V + TA V+QGG KRKGA YLE WH D+ EFL L+KN
Sbjct: 405 MGSHIKGTNGKSQGVVPFLNVADATAVAVNQGG-KRKGAVCAYLECWHKDVEEFLELRKN 463
Query: 318 HGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYERE 377
G + R D+ ALW+PDLFM RV+ NG W+LF P+E L D +G FE LY YE +
Sbjct: 464 TGDDRRRTHDMNTALWIPDLFMVRVRENGDWTLFSPDEVPDLHDQYGKAFETLYREYEEK 523
Query: 378 G-----KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEI 432
K K V A LW ++L+ ETG P+M FKD CN +S QQ+ G + SSNLCTEI
Sbjct: 524 AHQGLIKNAKTVSAVKLWRKMLSMLFETGHPWMTFKDPCNLRSPQQHTGVVHSSNLCTEI 583
Query: 433 IEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIV 492
TS E AVCNL SI LP +++ + D +KL
Sbjct: 584 TLNTSEEEIAVCNLGSINLPAHIKKGKL--------------------DTDKLRRTIKTA 623
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFE 552
L+ +ID+NYY V AR SNL+HRPIG+G+ G D L + + SPEA + E
Sbjct: 624 IRMLDNVIDINYYSVPQARNSNLKHRPIGLGLMGFQDALYELKIDYASPEAVEFADSSME 683
Query: 553 TIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWG 601
I Y+A++ S ++A + G Y TY S SKGIL D +++ S R DW
Sbjct: 684 LISYYAIEASCDLAKERGSYSTYEGSLWSKGILPIDSISLLQQARDKYLEQDRSQRLDWE 743
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR + G+RNS ++A PTA+ S I G ++ EP N+Y + LSGEF VVN +L+
Sbjct: 744 SLRIKVRTQGMRNSNVMAIAPTATISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLV 803
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
DL + +W + N + Y +GSVQ I IP ELK Y T +EI + LVD A R +I
Sbjct: 804 ADLKALNLWDEVMVNDLKYFNGSVQPISRIPAELKQRYATSFEIDPIWLVDAASRRQKWI 863
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPE 781
DQ+QSLNI+M QP+ KK+ L+ W RGLKT YYLRS A++A K TV
Sbjct: 864 DQAQSLNIYMAQPSGKKLDQLYMHAWMRGLKT-TYYLRSLGASNAEKSTVTDGALNAVK- 921
Query: 782 KPELVVDDETKMAQVVCSLTNREECMAC 809
++ DE K VCS+ + +C AC
Sbjct: 922 ----IILDEPK----VCSILD-PDCEAC 940
>gi|421650893|ref|ZP_16091266.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC0162]
gi|425747585|ref|ZP_18865588.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-348]
gi|445457674|ref|ZP_21446662.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC047]
gi|408509658|gb|EKK11329.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC0162]
gi|425493503|gb|EKU59735.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-348]
gi|444776291|gb|ELX00337.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC047]
Length = 944
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 317/852 (37%), Positives = 463/852 (54%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLKFDLEKLA---AAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK-----------------EKPEKPELVVDDETKMAQVV--- 797
LR+ A A K T++T + +KPE V +D A V
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 932
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|110635037|ref|YP_675245.1| ribonucleotide-diphosphate reductase subunit alpha [Chelativorans
sp. BNC1]
gi|110286021|gb|ABG64080.1| ribonucleoside-diphosphate reductase, alpha subunit [Chelativorans
sp. BNC1]
Length = 954
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 300/801 (37%), Positives = 446/801 (55%), Gaps = 59/801 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V+ DG + + ++TA +++ GL + +L + +Y G+T +L
Sbjct: 145 LQVMLEDGSKTPLDIARLTAVVEEACQGLEAVSAEAILSEAQ--RNLYDGITLDELSLAP 202
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKN---------TKKSFSETIKDMYNHYNE---R 108
A + P+Y+ ++AR+ + L + T+ + +E + + Y Y E
Sbjct: 203 ILAARTLVETEPNYSQVSARLLLDKLRREALTFVEGRPTQATQAEMV-ERYPAYFEGFIA 261
Query: 109 SGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
+G++A +I ++ +K L + + +RD + Y GF+TL Y L G E PQ
Sbjct: 262 AGIQAEMIDPELGRFDLKR---LGAALKPERDLRFQYLGFQTLYDRYFLHEDGVRYELPQ 318
Query: 169 HMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
MRV++G+ +ID AI+ Y ++S F ++PTLFNAGT RPQLSSCFL + D
Sbjct: 319 AFFMRVAMGLALREIDREARAIEFYDLISTFDFMCSTPTLFNAGTLRPQLSSCFLTTVSD 378
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
D ++GI++ +K+ A+++K +GG+G +R G+ I+GTNG S GIVP L+V NDTA
Sbjct: 379 D-LDGIFKAVKDNALLAKYSGGLGNDWTPVRGLGARIKGTNGKSQGIVPFLKVANDTAIA 437
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
V+QGG KRKGA YLE WH DI EFL+L+KN G + R D+ A WVPDLFMERV+ +
Sbjct: 438 VNQGG-KRKGAVCAYLETWHVDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMERVEAD 496
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIET 400
G+W+LF P+E L D +G F+ Y YE ++ V+A +LW +LT ET
Sbjct: 497 GEWTLFSPDETPDLHDLYGPAFKAAYEEYEARAARGEIRVFRQVRAVDLWRRMLTMLFET 556
Query: 401 GTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDV 460
G P++ FKD CN +S Q++ G + SSNLCTEI TS E AVCNL SI L V EK +
Sbjct: 557 GHPWITFKDPCNLRSPQRHAGVVHSSNLCTEITLNTSKDEVAVCNLGSINLAAHVSEKGL 616
Query: 461 PVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
D EKLA A L+ +ID+N+Y + ARRSNLRHRP+
Sbjct: 617 --------------------DMEKLARTVATAMRMLDNVIDINFYTIPEARRSNLRHRPV 656
Query: 521 GIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPV 580
G+G+ G D L + + S A + E I YHA+ S E+A + G Y ++ S
Sbjct: 657 GLGLMGFQDALQTLRLPYASEGAVEFADRSMEAIAYHAISASVELAKERGAYASFEGSLW 716
Query: 581 SKGILQPDMWNVIPSDR----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQIL 630
SKG+L D + + R DW LR + ++G+RNS +A PTA+ S I
Sbjct: 717 SKGVLPIDSLSFVAESRGVDGMDRGTTLDWESLRARVVEHGMRNSNTMAIAPTATISNIC 776
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPE 690
G ++ EP N++ + +SG+F VVN L+HDL G+W + + + Y DG + +I
Sbjct: 777 GVSQSIEPAYQNLFVKSNMSGDFTVVNAALVHDLKARGLWDEVMVSDLKYYDGLLGQIDR 836
Query: 691 IPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRG 750
+P++LK +Y T +EI L++ A R +IDQ+QSLN+++ P+ KK+ L+ W +G
Sbjct: 837 VPDDLKALYATAFEIDPAWLIEAASRRQKWIDQAQSLNLYIANPSGKKLDELYRLAWRKG 896
Query: 751 LKTGMYYLRSRAAADAIKFTV 771
LKT YYLRSR+A K T+
Sbjct: 897 LKT-TYYLRSRSATHVEKSTL 916
>gi|226940722|ref|YP_002795796.1| NrdA [Laribacter hongkongensis HLHK9]
gi|226715649|gb|ACO74787.1| NrdA [Laribacter hongkongensis HLHK9]
Length = 917
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 303/829 (36%), Positives = 457/829 (55%), Gaps = 56/829 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V + DG + + +++ +L+ +GL + P + +Y GVT ++++
Sbjct: 124 LHVTRPDGSRAPLDIERLGRQLEAACHGLEAD-TRPAALLADTLKNLYDGVTEAEVERAL 182
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
+A P Y + AR+ + + + + T +++ +R G++A L+ +
Sbjct: 183 ILSARQWIERDPAYDKVTARLLLDTIRREVAGGVAATYAEVFQQGIQR-GMQADLLDPRL 241
Query: 121 YEI-IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH 179
+ + + AA LD E RD + Y G +TL Y L V G+ +E PQ MRV++G+
Sbjct: 242 ADFDLPRLAAALDGE----RDRQFGYLGLQTLYDRYFLHVDGRRIEMPQTFFMRVAMGLA 297
Query: 180 KDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
++ D A++ Y ++S+ F ++PTLFNAGT QLSSC+L + D S++GI++ +K
Sbjct: 298 LNEADPTTQAMEFYDLLSRFDFMSSTPTLFNAGTRHSQLSSCYLTTIAD-SLDGIFDAIK 356
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
E A +SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 357 ENAQLSKFAGGLGNDWTPVRALGSHIKGTNGQSQGVVPFLKVANDTAVAVNQGG-KRKGA 415
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV N +W+LF P +
Sbjct: 416 VCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMQRVMENAEWTLFSPADV 475
Query: 357 SGLADCWGAEFEKLYTHYEREGKA-----KKVVQAQNLWFEILTSQIETGTPYMLFKDTC 411
L D G F + Y YE +A K ++A +LW ++LT ETG P++ +KD C
Sbjct: 476 PDLHDLTGRAFARRYAEYEAMARADTLRNAKTLRAVDLWRKMLTMLFETGHPWLTWKDAC 535
Query: 412 NRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVG 471
N +S QQ++G + SSNLCTEI TS E AVCNL S+ L ++E +
Sbjct: 536 NLRSPQQHVGRVHSSNLCTEITLNTSDDEIAVCNLGSVNLANHLKEGAL----------- 584
Query: 472 SRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
D EKLA + L+ +ID+N+YPVE AR +NLRHRP+G+GV G D
Sbjct: 585 ---------DQEKLARTVRVAMRMLDNVIDLNFYPVEKARTANLRHRPVGLGVMGFQDCL 635
Query: 532 ILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN 591
LL + + S A + E I YHA S+E+A G Y ++ S S+GIL D
Sbjct: 636 HLLRLPYGSQAAVGFADESMELIAYHAYLASTELAEMRGCYPSFEGSLWSQGILPQDSVE 695
Query: 592 VIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
++ S R DW +R+ I++ G+RNS +A PTA+ + I+G + EP
Sbjct: 696 LLAAERQGYLEVDRSSRLDWTPVRERIARFGMRNSNCLAIAPTATIANIIGVSASIEPTY 755
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYK 700
N++ + LSGEF VVN+ L+ DL +G+W + + Y DG + I IP+++K +Y
Sbjct: 756 KNLFVKSNLSGEFTVVNEFLVQDLKRLGLWDAVMLADLKYFDGDLAPIERIPQDIKTLYA 815
Query: 701 TVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRS 760
T +++ LV+ A R +IDQ+QSLN++M + KK+ +L+ W RGLKT YYLR+
Sbjct: 816 TAFDVDPGWLVEAASRRQKWIDQAQSLNLYMAGASGKKLDTLYKLAWVRGLKT-TYYLRT 874
Query: 761 RAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
AA A K T P + +V + + CS+ N +C AC
Sbjct: 875 LAATSAEKSTGRGGELNAVPIEGGMVAEPK------FCSIDN-PDCEAC 916
>gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 1306
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/791 (38%), Positives = 438/791 (55%), Gaps = 55/791 (6%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAA 65
+G++ + ++ R++ GL + P+L + +Y GV ++ + A A
Sbjct: 169 NGQRVPLDLAQLQFRIETACSGLGADVKAAPILA--ETMRNLYDGVPLDEVYKAAILAAR 226
Query: 66 AMTTNHPDYASLAARIAVSNLHKN------TKKSFSETIKDMYNHYNERSGLKAPLIADD 119
+ PDY AR+ + + + E D + + +R G+ A L+ +
Sbjct: 227 TLIEKDPDYTYATARLLFHTISREVLGRDVAQADMQEAYADYFPGFIKR-GIAAELLDEK 285
Query: 120 IYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH 179
+ + +K L S + RD +DY G +TL Y L +E PQ MRV++G+
Sbjct: 286 LQQFDLKR---LGSALKAGRDLQFDYLGLQTLYDRYFLHEGKTRIELPQAFFMRVAMGLS 342
Query: 180 KDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
++ID AI+ Y ++S F ++PTLFN+GT R QLSSC+L + DD ++GIYE++K
Sbjct: 343 LNEIDREARAIEFYEVLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LDGIYESIK 401
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
E A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 402 ENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGA 460
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
YLE WH DI EFL L+KN G + R D+ A W+PDLFM RV G W+LF P+
Sbjct: 461 VCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMRRVMEKGTWTLFSPSNV 520
Query: 357 SGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTC 411
L D +GAEFEK Y YE E K + VQA +LW ++LT ETG P++ FKD C
Sbjct: 521 PDLHDLFGAEFEKAYVAYEEKAARGEIKPSRTVQASDLWRKMLTMLFETGHPWITFKDAC 580
Query: 412 NRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVG 471
N +S QQ+ G + SSNLCTEI TS TETAVCNL S+ L + +
Sbjct: 581 NVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLQHL---------------- 624
Query: 472 SRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
K+ D KL + L+ +ID+NYY V+ AR SN+RHRP+G+G+ D+
Sbjct: 625 ----KDGALDHNKLKRTISTAMRMLDNVIDINYYAVKKARDSNMRHRPVGLGLMAFQDSL 680
Query: 532 ILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN 591
L + + S A + E I Y+A S+++A + G Y +Y S KG+L PD +
Sbjct: 681 YELRIPYASDAAVEFADQSMEAISYYAYWASTDLARERGKYHSYKGSLWDKGVLPPDTLD 740
Query: 592 VIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
++ + R DW LR+ I+ +G+RNS VA PTA+ S I+G + EP
Sbjct: 741 MLANARGGYVEVDRSSTLDWNALRNKIAADGMRNSNCVAIAPTATISNIIGVDASIEPCF 800
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYK 700
N+ + LSGEF V+N +L+ DL +G+W + + + DGS+ I +P+E+K +Y
Sbjct: 801 GNLSVKSNLSGEFTVINSYLVRDLKRLGLWDDVMVMDLKHFDGSLSPIDRVPQEIKQLYA 860
Query: 701 TVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRS 760
T +E++ LV+ A R +IDQ+QSLNI+M + KK+ + W RGLKT YYLR+
Sbjct: 861 TAFEVETRWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYYLRT 919
Query: 761 RAAADAIKFTV 771
+A A K TV
Sbjct: 920 MSATHAEKSTV 930
>gi|126640805|ref|YP_001083789.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ATCC 17978]
Length = 885
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 317/852 (37%), Positives = 463/852 (54%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 63 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 120
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 121 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 179
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 180 SPDLLKFDLEKLA---AAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 236
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 237 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 295
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 296 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 354
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 355 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 414
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 415 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 474
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 475 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 520
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 521 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 574
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 575 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 634
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 635 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 694
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK
Sbjct: 695 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 754
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 755 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 813
Query: 758 LRSRAAADAIKFTVDTSVFK-----------------EKPEKPELVVDDETKMAQVV--- 797
LR+ A A K T++T + +KPE V +D A V
Sbjct: 814 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 873
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 874 CSIDN-PDCEAC 884
>gi|300690380|ref|YP_003751375.1| ribonucleoside-diphosphate reductase subunit alpha [Ralstonia
solanacearum PSI07]
gi|299077440|emb|CBJ50066.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum PSI07]
gi|344169190|emb|CCA81513.1| ribonucleoside-diphosphate reductase, alpha subunit [blood disease
bacterium R229]
Length = 987
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 303/767 (39%), Positives = 429/767 (55%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
E DP + ++ +Y+GV SQ+ + A A + P Y+ + ARI + + +
Sbjct: 180 EAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQVTARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ + D + + +R G+ A L+ + + + + K A LD+ RD ++
Sbjct: 240 GEEVTQAEMAARYADYFPQFIKR-GINAGLLDEKLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + K +E PQ MRV++G+ ++ID AI+ Y ++S F +
Sbjct: 295 YLGLQTLFDRYFLHISEKRIEMPQAFFMRVAMGLSLNEIDRESRAIEFYQLLSSFDFMSS 354
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV NG+W+LF P+ L D G FE Y YE
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGKAFETAYLGYEEKVARG 532
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 533 EIKLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L V + D V D +KL +
Sbjct: 593 NDSEIAVCNLGSVNLVAHLVTQADGSVA----------------LDHDKLKKTVRTAMRM 636
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D +L + + S A Q + E +
Sbjct: 637 LDNVIDINYYAVKKARDSNLRHRPVGLGIMGFQDALHVLRIPYASDAAVQFADNSMEAVC 696
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y TY S +GIL D ++ +R DW LR
Sbjct: 697 YYAYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSSMDWDSLR 756
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 757 ARIQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 816
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+
Sbjct: 817 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQA 876
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + K + + W RGLKT YYLR+ A K TV
Sbjct: 877 QSLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 922
>gi|92119122|ref|YP_578851.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrobacter
hamburgensis X14]
gi|91802016|gb|ABE64391.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
Length = 966
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 303/796 (38%), Positives = 435/796 (54%), Gaps = 60/796 (7%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DG + ++ A +++ GL + +L + +Y G++ +L A
Sbjct: 154 DGSMAPLDTRRLAAVVEEACAGLEGVSAEAILT--ETHRNLYDGISADELALAPILAART 211
Query: 67 MTTNHPDYASLAARIAVSNLHKNT-----KKSFSETIKDMYNHYNE------RSGLKAPL 115
+ PDYA +AR+ + L + + T +M Y E ++G++ L
Sbjct: 212 LVETDPDYAKASARLLLDKLRREALSLIAGRPEQATQAEMTGRYAEYFLGYVQTGIENEL 271
Query: 116 IADDIYEIIM-KNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
+ +I + + AA L E RD +DY GF+TL Y L V+G E PQ MRV
Sbjct: 272 LDPEIGRFDLDRLAAALKPE----RDLQFDYLGFQTLYDRYFLHVRGTRFELPQAFFMRV 327
Query: 175 SIGIHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGI 231
+ G+ +ID AI Y+++S F ++PTLFNAGT R QLSSCFL + DD ++GI
Sbjct: 328 ACGLALREIDREDKAIAFYNLLSSFDFMASTPTLFNAGTQRAQLSSCFLTTVADD-LDGI 386
Query: 232 YETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGG 291
++ +K+ A++SK AGG+G +R G++I+GTNG S G+VP L+V NDTA V+QGG
Sbjct: 387 FKAIKDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGESQGVVPFLKVANDTAIAVNQGG- 445
Query: 292 KRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLF 351
KRKGA YLE WH DI EFL+L+KN G + R D+ A WVPDLFM+RV+ +G W+LF
Sbjct: 446 KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEEDGVWTLF 505
Query: 352 CPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYML 406
PNE L D G F + Y HYE E + K V+A +LW +LT ETG P++
Sbjct: 506 SPNETPDLHDLTGKAFAERYAHYEGKAARGEMRVTKQVRAVDLWRRMLTMLFETGHPWIT 565
Query: 407 FKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHP 466
FKD CN +S QQ+ G + SSNLCTEI TS TE AVCNL S+ L + + +
Sbjct: 566 FKDPCNLRSPQQHCGVVHSSNLCTEITLNTSNTEVAVCNLGSVNLVNHLHDGKL------ 619
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
D LA L+ +++VN+Y + AR SNLRHRP+G+G+ G
Sbjct: 620 --------------DHAHLARTVKTAMRMLDNVLNVNFYTIPEARTSNLRHRPVGLGLMG 665
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D +L + + EA + E I Y A+ S ++AA+ G Y +Y S SKGIL
Sbjct: 666 FQDALNILRLPYACDEAVSFADESMEAISYWAISGSVDLAAERGRYPSYQGSLWSKGILP 725
Query: 587 PDMWNVIP-----------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ S R DW LR + G+RNS +A PTA+ S I G ++
Sbjct: 726 LDSLALVDEARGAPIDLDRSSRLDWEALRQRVMTVGMRNSNCMAIAPTATISNICGVSQS 785
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + +SG+F VVN HL+ DL G+W + + + Y DG + +I +P++L
Sbjct: 786 IEPAYQNLYVKSNMSGDFTVVNAHLVRDLKARGLWDEVMISDLKYFDGGLSRIDRVPDDL 845
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
K +Y T +EI L+D A R +IDQ+QSLN+++ P+ KK+ +L+ W RGLKT
Sbjct: 846 KALYATAFEIDSAWLIDAAARRQKWIDQAQSLNLYIADPSGKKLDALYRHAWKRGLKT-T 904
Query: 756 YYLRSRAAADAIKFTV 771
YYLRSR+A K T+
Sbjct: 905 YYLRSRSATHVEKSTL 920
>gi|330815477|ref|YP_004359182.1| Ribonucleotide-diphosphate reductase alpha subunit [Burkholderia
gladioli BSR3]
gi|327367870|gb|AEA59226.1| Ribonucleotide-diphosphate reductase alpha subunit [Burkholderia
gladioli BSR3]
Length = 993
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 309/775 (39%), Positives = 431/775 (55%), Gaps = 57/775 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI LH ++
Sbjct: 188 DPIVA--ETVKNLYDGVPLSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 242
Query: 95 SETIK--DMYNHYNE------RSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDY 145
E + +M Y E + G++A L+ D + + +++ LD+ RD + Y
Sbjct: 243 GEEVAQGEMQARYAEYFPQFLKRGVEAELLDDKLLQFDLVRLGEALDAS----RDLQFGY 298
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L V+G +E PQ MRV++G+ ++ID AI+ Y+++S F ++
Sbjct: 299 LGLQTLYDRYFLHVEGTRIEMPQAFYMRVAMGLALNEIDREARAIEFYNVLSSFDFMSST 358
Query: 203 PTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G +RA GS+I
Sbjct: 359 PTLFNSGTRRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHI 417
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 418 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDR 476
Query: 323 HRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----E 377
R D+ A W+PDLFM+RV G W+LF P+ L D +GAEFE Y YE E
Sbjct: 477 RRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYLGYEEKVARGE 536
Query: 378 GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI TS
Sbjct: 537 LKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTS 596
Query: 438 PTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENL 496
+E AVCNL S+ L ++ D GS D +KL ++ L
Sbjct: 597 DSEIAVCNLGSVNLVAHLAKQAD-----------GSYA-----LDHDKLKRTVSVAMRML 640
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYY 556
+ +ID+NYY V AR SNL+HRP+G+G+ G D LL F S A + E + Y
Sbjct: 641 DNVIDINYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPFSSDTAVEFADRSMEAVCY 700
Query: 557 HALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRD 605
+A S+E+A + G Y +Y S +GIL D ++ S+ DW LR
Sbjct: 701 YAYWASTELAEERGRYSSYTGSLWDRGILPQDTLKLLEEARGGYVEVDMSESLDWTSLRG 760
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
IS +G+RNS +A PTA+ S I+G + C EP N++ + LSGEF VVN++L+ DL
Sbjct: 761 RISVHGMRNSNCIAIAPTATISNIIGVSPCIEPTFQNLFVKSNLSGEFTVVNEYLVRDLK 820
Query: 666 EMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQ 725
E G+W + + Y DG + +I IP +L+ IY T +E+ LV+ A R +IDQ+Q
Sbjct: 821 ERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQ 880
Query: 726 SLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKP 780
SLNI M + KK+ ++ W RGLKT YYLR+ AA K TV P
Sbjct: 881 SLNIFMAGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 934
>gi|91787005|ref|YP_547957.1| ribonucleotide-diphosphate reductase subunit alpha [Polaromonas sp.
JS666]
gi|91696230|gb|ABE43059.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
Length = 969
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 296/777 (38%), Positives = 438/777 (56%), Gaps = 58/777 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV ++ + + A + PDY AR+ +H ++
Sbjct: 182 DPIVA--ETMRNLYDGVPIDEVYKASILAARTLIEKDPDYTYATARLL---MHTIRREVL 236
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + ++M++ Y E G++ L+ + + + + A L + + +RD +DY
Sbjct: 237 GEEVSQEEMHSRYAEYFPKFIAKGVQNELLDEKLQQF---DLARLGAALKPERDLKFDYL 293
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+ + +E PQ MRV++G+ +ID AI+ Y ++S F ++P
Sbjct: 294 GLQTLFDRYFLHVRKQRIELPQAFFMRVAMGLSLGEIDREARAIEFYEILSSFDFMSSTP 353
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFNAGT R QLSSC+L + DD + GIY+ +KE A++SK AGG+G +RA G++I+
Sbjct: 354 TLFNAGTLRSQLSSCYLTTVADD-LGGIYDAIKENALLSKFAGGLGNDWTPVRALGAHIK 412
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 413 GTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 471
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM RV G W+LF P++ L D +G EFEK+YT YE E
Sbjct: 472 RTHDMNTANWIPDLFMRRVMEKGTWTLFSPSDTPDLHDKFGKEFEKIYTAYEARAERGEI 531
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K + +QA ++W ++L+ ETG P++ FKD CN +S QQ+ G + SSNLCTEI TS
Sbjct: 532 KPARKLQATDMWRKMLSMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSD 591
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
TETAVCNL S+ L + +++ + D +KL + L+
Sbjct: 592 TETAVCNLGSVNLVQHLKDGAI--------------------DHDKLKKTITTAMRMLDN 631
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY V+ AR SN+RHRP+G+G+ G D L + + S EA + E + YHA
Sbjct: 632 VIDINYYAVKKARDSNMRHRPVGLGIMGFQDCLYELRVPYASQEAVEFADKSMEAVCYHA 691
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMI 607
S+E+A + G Y +Y S KGIL D +++ +R DW LR I
Sbjct: 692 YWASTELAKERGKYASYKGSLWDKGILPLDTLDMLAEERGGYVEVDRSATLDWDALRQKI 751
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+++G+RNS VA PTA+ S I+G + C EP N+ + LSGEF V+N +L+ DL +
Sbjct: 752 AQDGMRNSNCVAIAPTATISNIIGVDACIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRL 811
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W + + + DGS++ + +P+E+K +Y T +E++ +V+ A R +IDQ+QSL
Sbjct: 812 GLWDDVMVVDLKHFDGSLRPVDRVPQEIKALYATAFEVETSWIVEAAARRQKWIDQAQSL 871
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPE 784
NI+M + KK+ + W RGLKT YYLR+ A A K TV PE
Sbjct: 872 NIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMGATHAEKSTVKAGKMNSVSSGPE 927
>gi|82703583|ref|YP_413149.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrosospira
multiformis ATCC 25196]
gi|82411648|gb|ABB75757.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
25196]
Length = 956
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 309/837 (36%), Positives = 457/837 (54%), Gaps = 62/837 (7%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V DGR+ + ++ A + GL E DP L+ + +Y GV ++ + +
Sbjct: 150 VLEDGRRVPLDTARLLALIGSCCEGLG-EGVDPALILKATLKDLYDGVPMEEVRKSVILS 208
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A A+ P Y+ + AR+ LH + E I ++M Y E + G++A L
Sbjct: 209 ARALLEKEPAYSYVTARLL---LHSLRFEVLGEEIVQREMAGRYMEYFPAFIKRGIEAEL 265
Query: 116 IADDIYEI-IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
+ + + + + + A L +E RD + Y G +TL Y L +Q + +E PQ MRV
Sbjct: 266 LDERLAQFDLPRLAQALHAE----RDLKFGYLGLQTLYDRYFLHIQERRIELPQAFFMRV 321
Query: 175 SIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGI 231
++G+ ++ID AI+ YH++S F ++PTLFN+GT R QLSSC+L + DD ++GI
Sbjct: 322 AMGLALNEIDREARAIEFYHVLSNFDFMSSTPTLFNSGTRRSQLSSCYLTTVPDD-LDGI 380
Query: 232 YETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGG 291
YE +KE A+++K AGG+G +RA GS+I+GTNG S G+VP L+V +DTA V+QGG
Sbjct: 381 YEGIKENALLAKYAGGLGNDWTRVRAMGSHIKGTNGKSQGVVPFLKVVSDTAVAVNQGG- 439
Query: 292 KRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLF 351
KRKGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV G+W+LF
Sbjct: 440 KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTATWVPDLFMKRVMEGGEWTLF 499
Query: 352 CPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYML 406
P++ L + +G FE+ Y YE E K + A LW ++L+ ETG P++
Sbjct: 500 SPSDVPDLHEKYGKAFEQAYLAYEDKVARGELDLYKTIPAVQLWRKMLSMLFETGHPWIT 559
Query: 407 FKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHP 466
FKD CN +S Q ++G + SSNLCTEI T+ E AVCNL SI L + +
Sbjct: 560 FKDACNIRSPQNHIGVVHSSNLCTEITLNTNDQEIAVCNLGSINLAAHIDD--------- 610
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
G K D +KL ++ L+ +ID+N+Y V AR SNLRHRP+G+G+ G
Sbjct: 611 -------GGK---LDADKLKRTVSLAMRMLDNVIDINFYAVAKARNSNLRHRPVGLGIMG 660
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D + + + S EA + E + YHA S+E+A + G Y +Y S +GIL
Sbjct: 661 FQDCLHRMRIPYASDEAVEFADRTMEAMAYHAYWASTELAEERGRYASYRGSLWDRGILP 720
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D +++ +R DW LR+ I +G+RNS +A PTA+ S I+G +
Sbjct: 721 QDTLDLLQEERGGYIEADRSSTLDWEALRERIRNHGMRNSNCLAIAPTATISNIVGVSAS 780
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF + N++L+ DL ++G+W + + I Y DG++ KI +P EL
Sbjct: 781 IEPTFKNLYVKSNLSGEFTIANQYLVSDLKKLGLWDEVMISDIKYFDGALGKIDRVPTEL 840
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ +Y T +E++ L++ A R +IDQSQSLNI++ + KK+ + W RGLKT
Sbjct: 841 RKLYATAFEVEPQWLIEAAARRQKWIDQSQSLNIYIASVSGKKLDETYKLAWVRGLKT-T 899
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQV---VCSLTNREECMAC 809
YYLRS A A K TV P + L + CS+ + EC +C
Sbjct: 900 YYLRSLGATSAEKSTVQAGSLNAVPAEGSLPAMGAAAVPATDVSFCSVDD-PECESC 955
>gi|260551038|ref|ZP_05825243.1| ribonucleotide reductase [Acinetobacter sp. RUH2624]
gi|260405986|gb|EEW99473.1| ribonucleotide reductase [Acinetobacter sp. RUH2624]
Length = 944
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 314/852 (36%), Positives = 463/852 (54%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL + ++ + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALKATVNRAAEGLEGIEVEAII--DETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLKFDLEKLA---AAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + VR
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHVR------------- 580
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 581 -------GGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDTLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L + G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKDRGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK-----------------EKPEKPELVVDDETKMAQVV--- 797
LR+ A A K T++T + +KPE V +D A V
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 932
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|445404933|ref|ZP_21431070.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-57]
gi|444782251|gb|ELX06160.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-57]
Length = 944
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 316/852 (37%), Positives = 463/852 (54%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLKFDLEKLA---AAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GA+F + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAKFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK-----------------EKPEKPELVVDDETKMAQVV--- 797
LR+ A A K T++T + +KPE V +D A V
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 932
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|387127722|ref|YP_006296327.1| ribonucleotide reductase subunit alpha [Methylophaga sp. JAM1]
gi|386274784|gb|AFI84682.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Methylophaga sp. JAM1]
Length = 955
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 295/798 (36%), Positives = 444/798 (55%), Gaps = 57/798 (7%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V DG ++ + D++ + + GL+ D + + ++ GV+ +++
Sbjct: 133 LHVTLNDGTRQPLDIDRLRNLIDEACEGLA--QVDNAAILRDTQRNIFDGVSEKDVEKAL 190
Query: 61 AETAAAMTTNHPDYASLAARI--------AVSNLHKNTKKSFSETIKDMYNHYNE---RS 109
+A P Y++LAAR+ A+S ++++ +++ + D Y Y + ++
Sbjct: 191 VMSARTFIEKDPAYSTLAARLLMDSIRREALSFVYQSPRQASQGEMADQYKDYFKTYIKT 250
Query: 110 GLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
++ LI E+ + + L S + + DF + Y G +TL Y + G E PQ
Sbjct: 251 AIENELIDS---ELSLYDLERLGSALKPENDFSFTYLGLQTLYDRYFIHCDGTRFELPQA 307
Query: 170 MLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDD 226
MRV++G+ ++ID AI+ Y+++S F ++PTLFNAGT RPQLSSC+L + DD
Sbjct: 308 FYMRVAMGLAINEIDREARAIEFYNLLSSFDFMSSTPTLFNAGTLRPQLSSCYLTTVPDD 367
Query: 227 SIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYV 286
+ GIY +++ A++SK AGG+G +R G++I+GTNG S G+VP L+V NDTA V
Sbjct: 368 -LSGIYSAMRDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGKSQGVVPFLKVANDTAVAV 426
Query: 287 DQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNG 346
+QGG KRKGA YLE WH D+ EFL+L+KN G + R D+ A W+PDLFM+RV G
Sbjct: 427 NQGG-KRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVAEEG 485
Query: 347 QWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETG 401
QW+LF P E L D G FEK Y YE E + K + A +LW ++L ETG
Sbjct: 486 QWTLFSPEEVPDLHDLTGLGFEKAYAEYEEKAARGEIRNFKTMPATDLWRKMLGMLFETG 545
Query: 402 TPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVP 461
P++ FKD CN +S QQ++G + SSNLCTEI TS E AVCNL SI + + +
Sbjct: 546 HPWITFKDPCNLRSPQQHIGVVHSSNLCTEITLNTSDQEIAVCNLGSINMVQHI------ 599
Query: 462 VESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIG 521
N D EKL L+ +I+ NYY V AR SNL HRP+G
Sbjct: 600 -------------DANGKLDKEKLNRTVKTAMRMLDNVIEYNYYSVPQARHSNLLHRPVG 646
Query: 522 IGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVS 581
+G+ G D L + + + EA + + E + Y+A+ SS++AA+ G Y++Y S S
Sbjct: 647 LGIMGFQDALYKLRIPYSTEEAVKFADESMEAVSYYAIDASSDLAAERGKYKSYEGSLWS 706
Query: 582 KGILQPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQIL 630
KGIL D ++ R DW LRD + + G+RNS +A PTA+ S I
Sbjct: 707 KGILPIDSIKILKEARGEYLQQDESQTMDWDALRDKVKRQGMRNSNTMAIAPTATISNIC 766
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPE 690
G ++ EP N++ + LSGEF V+N +++ DL + G+W + N + Y DGS+Q I
Sbjct: 767 GVSQSIEPTYQNLFVKSNLSGEFTVINPYMVEDLKQRGLWDDVMINDLKYYDGSLQAIDR 826
Query: 691 IPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRG 750
+P ELK +Y T +E+ L++ A R ++DQ+QSLN++M +P+ KK+ +L+ W RG
Sbjct: 827 VPAELKALYTTAFEMDARWLIEAASRRQKWLDQAQSLNLYMAEPSGKKMDNLYKLAWVRG 886
Query: 751 LKTGMYYLRSRAAADAIK 768
LKT YYLRS A A K
Sbjct: 887 LKT-TYYLRSMGATGAEK 903
>gi|113869189|ref|YP_727678.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
eutropha H16]
gi|113527965|emb|CAJ94310.1| Ribonucleoside-diphosphate reductase alpha subunit [Ralstonia
eutropha H16]
Length = 977
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 303/764 (39%), Positives = 428/764 (56%), Gaps = 51/764 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN---- 89
+P+L ++ +Y GV +Q+ + A A + PDY+ + ARI + + K
Sbjct: 187 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGT 244
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDYF 146
T+ S + + + R G++A L+ + + + + A LD+ RDF ++Y
Sbjct: 245 EVTQAEMSTRYAEYFPKFIAR-GIEAELLDEQLATFDLARLGAALDA----GRDFQFNYL 299
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGI---HKDDIDSAIKTYHMMSQRWFTHASP 203
G +TL Y L + +E PQ MRV++G+ KD AI+ Y ++S F ++P
Sbjct: 300 GLQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEKDREARAIEFYQLLSSFDFMSSTP 359
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R QLSSC+L + DD +EGIYE LKE A++SK AGG+G N+RA GS+I+
Sbjct: 360 TLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIK 418
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 419 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 477
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM+RV G+W+LF P L D G EFEK Y YE E
Sbjct: 478 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPATCPDLHDKVGKEFEKAYLGYEAKAASGEL 537
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+
Sbjct: 538 KLFKKLPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNE 597
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
+E AVCNL S+ L +H ++ + D KL + L+
Sbjct: 598 SEIAVCNLGSVNLV-----------AHMAK----QADGTYALDHAKLQKTVRTAMRMLDN 642
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY V+ AR SNLRHRP+G+G+ G D +L + S A + E + Y+A
Sbjct: 643 VIDINYYAVDKARNSNLRHRPVGMGIMGFQDCLHVLRTPYSSDAAVKFADTSMEAVCYYA 702
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMI 607
S+E+A + G Y +Y S +GIL D ++ +R DW LR I
Sbjct: 703 YHASTELAEERGRYSSYEGSLWDRGILPQDSLKLLAEERGGYLDVDMSATMDWDALRARI 762
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E
Sbjct: 763 KQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKER 822
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W + + Y DGS+ +I IP++L+ IY T +E++ LV+ A R +IDQ+QSL
Sbjct: 823 GLWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQSL 882
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + KK+ + W RGLKT YYLR+ AA K TV
Sbjct: 883 NIYMAGASGKKLDDTYKLAWVRGLKT-TYYLRTMAATHVEKSTV 925
>gi|344172466|emb|CCA85109.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
syzygii R24]
Length = 987
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 302/767 (39%), Positives = 430/767 (56%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
E DP + ++ +Y+GV SQ+ + A A + P Y+ + ARI + + +
Sbjct: 180 EAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQVTARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ + D + + +R G+ A L+ + + + + K A LD+ RD ++
Sbjct: 240 GEEVTQAEMAARYADYFPQFIKR-GINAGLLDEKLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + K +E PQ MRV++G+ ++ID AI+ Y ++S F +
Sbjct: 295 YLGLQTLFDRYFLHISEKRIEMPQAFFMRVAMGLSLNEIDRESRAIEFYQLLSSFDFMSS 354
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV NG+W+LF P+ L D G FE Y YE
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGKAFETAYLGYEEKVARG 532
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 533 EIKLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L +++ D V D +KL +
Sbjct: 593 NDSEIAVCNLGSVNLVAHLIKQADGSVA----------------LDHDKLKKTVRTAMRM 636
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D+ +L + + S A Q E +
Sbjct: 637 LDNVIDINYYAVKKARDSNLRHRPVGLGIMGFQDSLHVLRIPYASEVAVQFADTSMEAVC 696
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y TY S +GIL D ++ +R DW LR
Sbjct: 697 YYAYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSSMDWDSLR 756
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 757 ARIQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 816
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+
Sbjct: 817 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQA 876
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + K + + W RGLKT YYLR+ A K TV
Sbjct: 877 QSLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 922
>gi|421663679|ref|ZP_16103823.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC110]
gi|445487511|ref|ZP_21457782.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii AA-014]
gi|408713018|gb|EKL58193.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC110]
gi|444768401|gb|ELW92616.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii AA-014]
Length = 944
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 316/852 (37%), Positives = 462/852 (54%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLKFDLEKLA---AAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK-----------------EKPEKPELVVDDETKMAQVV--- 797
LR+ A A K T++T + +KPE +D A V
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAAEEDGFTQAAPVPMA 932
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|94312019|ref|YP_585229.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
metallidurans CH34]
gi|93355871|gb|ABF09960.1| Ribonucleoside-diphosphate reductase alpha subunit [Cupriavidus
metallidurans CH34]
Length = 979
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 307/765 (40%), Positives = 427/765 (55%), Gaps = 53/765 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKS 93
+P+L ++ +Y GV +Q+ + A A + P Y+ + ARI + + K +
Sbjct: 189 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPAYSQVTARILLHTIRKEILGA 246
Query: 94 FSETIKDMYNHYNE------RSGLKAPLIADDI--YEIIMKNAACLDSEIIYDRDFDYDY 145
T +M Y E G++A L+ + + Y++ AA LD+ RDF ++Y
Sbjct: 247 -EVTQTEMATKYAEYFPKFIARGIEAELLDEKLATYDLARLGAA-LDAS----RDFQFNY 300
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI---HKDDIDSAIKTYHMMSQRWFTHAS 202
G +TL Y L V +E PQ MRV++G+ KD AI+ Y ++S F ++
Sbjct: 301 LGLQTLYDRYFLHVDEVRIEMPQAFFMRVAMGLALEEKDREARAIEFYQLLSSFDFMSST 360
Query: 203 PTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R QLSSC+L + DD +EGIYE LKE A++SK AGG+G N+RA GS+I
Sbjct: 361 PTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 419
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 420 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 478
Query: 323 HRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----E 377
R D+ A W+PDLFM+RV NG+W+LF P L D G FE+ Y YE E
Sbjct: 479 RRTHDMNTANWIPDLFMKRVMENGEWTLFSPASCPDLHDKVGKAFEQAYLGYEAKAANGE 538
Query: 378 GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTS 437
K K V A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+
Sbjct: 539 LKLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 598
Query: 438 PTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
+E AVCNL S+ L + ++ D KL + L+
Sbjct: 599 ESEIAVCNLGSVNLVAHLMQQ---------------ADGTYVLDHAKLQKTIRTAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY VE AR SNLRHRP+G+G+ G D +L + S A + E + Y+
Sbjct: 644 NVIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYASDAAVKFADTSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDM 606
A + S+E+A + G Y TY S +GIL D ++ +R DW LR
Sbjct: 704 AYQASTELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLDVDLSSTMDWDSLRGR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E
Sbjct: 764 IKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DGS+ +I IP++L+ IY T +E++ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
LNI+M + KK+ + W RGLKT YYLR+ AA K TV
Sbjct: 884 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTV 927
>gi|424056802|ref|ZP_17794319.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
nosocomialis Ab22222]
gi|425740284|ref|ZP_18858458.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-487]
gi|407440335|gb|EKF46852.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
nosocomialis Ab22222]
gi|425495051|gb|EKU61241.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-487]
Length = 944
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 314/852 (36%), Positives = 463/852 (54%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL + ++ + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALKATVNRAAEGLEGIEVEAII--DETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLKFDLEKLA---AAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDTLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L + G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKDRGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK-----------------EKPEKPELVVDDETKMAQVV--- 797
LR+ A A K T++T + +KPE V +D A V
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 932
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|254282207|ref|ZP_04957175.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[gamma proteobacterium NOR51-B]
gi|219678410|gb|EED34759.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[gamma proteobacterium NOR51-B]
Length = 961
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 303/801 (37%), Positives = 437/801 (54%), Gaps = 58/801 (7%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
VV+ DG + + +++ + + GL+ + + +Y GV ++
Sbjct: 156 VVQADGSRSPLDIERVRTIVAEACEGLA--DVSEAAIIDEALRNLYDGVAAEEVSTALVI 213
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFS----ETIKDMYNHYNE------RSGLK 112
TA + P+Y+ AAR+ + NL T +DM HY + G++
Sbjct: 214 TARTLIEQEPNYSYAAARLLLDNLRAEGLSFMGVAELATQQDMTIHYPAALKAFIKRGIE 273
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
L+A D+ + ++ L S ++ +RD + Y G +TL Y + E PQ M
Sbjct: 274 LELLAPDLQDFDLEE---LGSALLPERDLQFSYLGLQTLYDRYFIHSDNTRFELPQIFFM 330
Query: 173 RVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
RV++G+ + AI+ Y ++S + ++PTLFNAGT RPQLSSC+L + DD +
Sbjct: 331 RVAMGLAAREEAKNARAIEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LF 389
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIY +++ A++SK AGG+G +RA G+YI+GTNG S GIVP L+V NDTA V+QG
Sbjct: 390 GIYGAIQDNAMLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGIVPFLKVVNDTAVAVNQG 449
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G KRKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV +G W+
Sbjct: 450 G-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGDWT 508
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPY 404
LF PN+ L D +G FE+ Y YE E K K ++AQ+LW ++L ETG P+
Sbjct: 509 LFSPNDVPDLHDLYGKAFEERYQQYEAMAASGELKLHKTLKAQSLWRKMLGMIFETGHPW 568
Query: 405 MLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVES 464
M FKD CN +S QQ+ G + SSNLCTEI TS E AVCNL S+ LP+ +
Sbjct: 569 MTFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSADEIAVCNLGSVNLPQHI--------- 619
Query: 465 HPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
+N + +KL L+ +ID+NYY V A +SN RHRPIG+GV
Sbjct: 620 -----------ENGVLNLDKLRSTIRTAIRMLDNVIDINYYSVPQAEQSNFRHRPIGMGV 668
Query: 525 QGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGI 584
G D L +A+ S +A E I Y+A++ SSE+A + G Y +Y S S+GI
Sbjct: 669 MGFQDALYKLDVAYGSDQAVSFADQSMEAISYYAIEASSELAEERGSYSSYEGSLWSQGI 728
Query: 585 LQPDMWNVIPSDR------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
D +++ R DW L+ ++ NG+RNS ++A PTA+ + I G
Sbjct: 729 FPHDSLDLLIQHRGEDYIQVNRDQSMDWAPLKAKVAANGMRNSNVMAIAPTATIANITGV 788
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIP 692
++ EP N+Y + LSGEF VVN +L+ DL G+W + N + Y DGSVQ I IP
Sbjct: 789 SQSIEPTYQNLYVKSNLSGEFTVVNPYLVKDLKARGLWDKVMVNDLKYYDGSVQAIDRIP 848
Query: 693 EELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLK 752
++LK Y T +E++ LVD A R +IDQ+QSLN++++ + KK+ + W GLK
Sbjct: 849 DDLKAKYATAFEVEPRWLVDSASRRQKWIDQAQSLNLYINNASGKKLDVTYRMAWFNGLK 908
Query: 753 TGMYYLRSRAAADAIKFTVDT 773
T YYLRS AA K TV++
Sbjct: 909 T-TYYLRSLAATGTEKSTVES 928
>gi|414172326|ref|ZP_11427237.1| ribonucleoside-diphosphate reductase, alpha subunit [Afipia
broomeae ATCC 49717]
gi|410894001|gb|EKS41791.1| ribonucleoside-diphosphate reductase, alpha subunit [Afipia
broomeae ATCC 49717]
Length = 972
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 308/853 (36%), Positives = 458/853 (53%), Gaps = 74/853 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
++V +G + + +++T +++ L PVL K +Y G++ +L
Sbjct: 149 LHVTLGNGTRVPLDVERLTLIIQEACANLDGVDAAPVLAETK--RNLYDGISQDELALAG 206
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNT-----KKSFSETIKDMYNHYNE------RS 109
A + P+YA ++AR+ + L S T DM Y E +
Sbjct: 207 IMAARTLVEQEPNYAYVSARLLLDKLRTEVLSFVHAAQISATQADMAARYVEYFPVYVKK 266
Query: 110 GLKAPLIADDIYEIIMKN-AACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
G++A L+ ++ +K AA L E RD + + G +TL Y L G +E PQ
Sbjct: 267 GIEAELLDPELARYDLKRIAAALKPE----RDLSFQFLGLQTLYDRYFLHQDGNRIELPQ 322
Query: 169 HMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
MRV++G+ +ID AI+ Y+++S F ++PTLFN+GT RPQLSSCFL + D
Sbjct: 323 AFFMRVAMGLAIREIDREARAIEFYNLLSSFDFMASTPTLFNSGTLRPQLSSCFLTTVAD 382
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
D ++GI++++K+ A+++K +GG+G +R G++I+GTNG S G+VP L+V NDTA
Sbjct: 383 D-LDGIFKSVKDNALLAKYSGGLGNDWTRVRGLGAHIKGTNGESQGVVPFLKVANDTAIA 441
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
V+QGG KRKGA YLE WH DI EFL+L+KN G + R D+ A WVPDLFM+RV+ +
Sbjct: 442 VNQGG-KRKGAVCAYLETWHVDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEAD 500
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIET 400
G+W+LF P+EA L D +G F + Y YE E + K ++A +LW +LT ET
Sbjct: 501 GEWTLFSPDEAPDLHDLYGKAFAERYAFYEAKAARGEMRVFKTLRATDLWRRMLTMLFET 560
Query: 401 GTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDV 460
G P++ FKD CN +S QQ++G I SSNLCTEI TS E AVCNL S+ L V E +
Sbjct: 561 GHPWITFKDPCNLRSPQQHVGVIHSSNLCTEITLNTSDDEVAVCNLGSVNLLNHVGEGGI 620
Query: 461 PVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
D +L + L+ +ID+N+Y + ARRSNL+HRP+
Sbjct: 621 --------------------DHARLKRTISTAMRMLDNVIDINFYTIPEARRSNLQHRPV 660
Query: 521 GIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPV 580
G+G+ G D L + S A E I +HA+ S ++AA+ G Y ++ S
Sbjct: 661 GLGLMGFQDALHALRIPMASDAAVAFADTSMEAISFHAISASVDLAAERGQYPSFKGSLW 720
Query: 581 SKGILQPDMWNVIPSDR------W----DWGVLRDMISKNGVRNSLLVAPMPTASTSQIL 630
S+GIL D ++ R W DW LR + G+RNS ++A PTA+ S I
Sbjct: 721 SRGILPIDSIEILADARGGLDADWSATLDWTALRARVQSVGMRNSNVMAIAPTATISNIC 780
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPE 690
G + EP N+Y + +SG+F VN+ L+ DL G+W + + + Y DGSV I
Sbjct: 781 GVAQSIEPAYQNLYVKSNMSGDFTEVNEFLVRDLKARGLWDEVMVSDLKYFDGSVGSIDR 840
Query: 691 IPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRG 750
+P++LK++Y T +EI L++ A R +IDQ+QSLN+++ P+ KK+ L+ W+RG
Sbjct: 841 VPDDLKLLYATAFEIDSAWLIEAAARRQKWIDQAQSLNLYIANPSGKKLDQLYRLAWTRG 900
Query: 751 LKTGMYYLRSRAAADAIKFT----------VDTSVFKEKPEKPELVVDDETKMAQ----V 796
LKT YYLRSR+A K T V ++ P +V+ + V
Sbjct: 901 LKT-TYYLRSRSATHVEKSTLKGTDGKLNAVSSTPLASLPVNKPIVISQASTAPDLSDAV 959
Query: 797 VCSLTNREECMAC 809
CS+ N +C AC
Sbjct: 960 ACSIDN-PDCEAC 971
>gi|241664220|ref|YP_002982580.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
pickettii 12D]
gi|240866247|gb|ACS63908.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12D]
Length = 994
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/767 (39%), Positives = 430/767 (56%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
+ DP + ++ +Y+GV +Q+ + A + + P Y+ + ARI + + +
Sbjct: 184 DAVDPEPILKETVKNLYEGVPMTQVYDSAILASRTLIEKDPAYSQVTARILLHTIRREIL 243
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ S D + + +R G+ A L+ D + + + + A LD+ RDF ++
Sbjct: 244 GEEVTQAEMSTRYVDYFPQFIKR-GINAELLDDKLAQFDLARLGAALDAS----RDFQFN 298
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + +E PQ MRV++G+ ++ID AI+ Y ++S F +
Sbjct: 299 YLGLQTLYDRYFLHINETRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSS 358
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 359 TPTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 417
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 418 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 476
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV G+W+LF P+ L D G FE+ Y YE
Sbjct: 477 RRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEQAYLAYEDKVARG 536
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 537 EIKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 596
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L V++ D V D EKL +
Sbjct: 597 NDSEIAVCNLGSVNLVAHLVKQADGSV----------------VLDHEKLKKTVRTAMRM 640
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D +L + + S A Q E +
Sbjct: 641 LDNVIDINYYAVKKARDSNLRHRPVGMGIMGFQDALHVLRVPYASEAAVQFADTSMEAVC 700
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y +Y S +GIL D ++ +R DW LR
Sbjct: 701 YYAYWASTELAEERGRYSSYKGSLWDRGILPQDSLKLLAEERGGYLEADMSSTMDWDSLR 760
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 761 GRIKQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 820
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+
Sbjct: 821 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQA 880
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + KK+ + W RGLKT YYLR+ A K TV
Sbjct: 881 QSLNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 926
>gi|430808366|ref|ZP_19435481.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus sp.
HMR-1]
gi|429499277|gb|EKZ97715.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus sp.
HMR-1]
Length = 979
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 307/765 (40%), Positives = 427/765 (55%), Gaps = 53/765 (6%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKS 93
+P+L ++ +Y GV +Q+ + A A + P Y+ + ARI + + K +
Sbjct: 189 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPAYSQVTARILLHTIRKEILGA 246
Query: 94 FSETIKDMYNHYNE------RSGLKAPLIADDI--YEIIMKNAACLDSEIIYDRDFDYDY 145
T +M Y E G++A L+ + + Y++ AA LD+ RDF ++Y
Sbjct: 247 -EVTQTEMATKYAEYFPKFIARGIEAELLDEKLATYDLARLGAA-LDAS----RDFQFNY 300
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI---HKDDIDSAIKTYHMMSQRWFTHAS 202
G +TL Y L V +E PQ MRV++G+ KD AI+ Y ++S F ++
Sbjct: 301 LGLQTLYDRYFLHVDEVRIEMPQAFFMRVAMGLALEEKDREARAIEFYQLLSSFDFMSST 360
Query: 203 PTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R QLSSC+L + DD +EGIYE LKE A++SK AGG+G N+RA GS+I
Sbjct: 361 PTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 419
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 420 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 478
Query: 323 HRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----E 377
R D+ A W+PDLFM+RV NG+W+LF P L D G FE+ Y YE E
Sbjct: 479 RRTHDMNTANWIPDLFMKRVMENGEWTLFSPASCPDLHDKVGKAFEQAYLGYEAKAANGE 538
Query: 378 GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTS 437
K K V A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+
Sbjct: 539 LKLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 598
Query: 438 PTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
+E AVCNL S+ L + ++ D KL + L+
Sbjct: 599 ESEIAVCNLGSVNLVAHLMQQ---------------ADGTYVLDHAKLQKTIRTAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY VE AR SNLRHRP+G+G+ G D +L + S A + E + Y+
Sbjct: 644 NVIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYASDAAVKFADTSMEAVCYY 703
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDM 606
A + S+E+A + G Y TY S +GIL D ++ +R DW LR
Sbjct: 704 AYQASTELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLEVDLSSTMDWDSLRGR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E
Sbjct: 764 IKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKE 823
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DGS+ +I IP++L+ IY T +E++ LV+ A R +IDQ+QS
Sbjct: 824 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
LNI+M + KK+ + W RGLKT YYLR+ AA K TV
Sbjct: 884 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTV 927
>gi|294649453|ref|ZP_06726878.1| ribonucleoside-diphosphate reductase alpha subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|292824658|gb|EFF83436.1| ribonucleoside-diphosphate reductase alpha subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 944
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 318/852 (37%), Positives = 463/852 (54%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + G+ + + D +TA ++ S GL E D + + +Y GV S +
Sbjct: 122 LQITDAKGQLQPLDLDALTATIETASAGL--EGIDVQAIVDETVKNLYNGVKESDVATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ + L +T F ++T++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLCNEL-VSTGLEFLGLPTDTLEGDALETFLKKGIELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + A L + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLNF---DLAKLAAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ ++ + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEENKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH D+ EFL L+KN G + R D+ A WVPDLFM+RV + +W+LF P
Sbjct: 414 KGAVCAYLETWHLDVEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDAEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y HYE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAHYEAVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
+ D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------QGGVLDREKLARTIKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+G+A+ S A + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGIAYGSDAAVDFADESMEVISYYAIQTSSDLALERGAYSTFEGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDTLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E+ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVDTRWIVDAASRRQKWIDQAQSLNLYIAGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK-------EKP---------EKPELVVDDE--TKMAQV--V 797
LR+ A A K T++T E P +KPE V++E T A V
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPASVEAPVVAAQAVEDKKPEAQVEEEGFTTAAPVPMA 932
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|88705572|ref|ZP_01103282.1| ribonucleoside-diphosphate reductase, alpha subunit [Congregibacter
litoralis KT71]
gi|88700085|gb|EAQ97194.1| ribonucleoside-diphosphate reductase, alpha subunit [Congregibacter
litoralis KT71]
Length = 969
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 311/801 (38%), Positives = 438/801 (54%), Gaps = 58/801 (7%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
VV+ DG + + +++ + + GL + + + +Y GV+ +L
Sbjct: 165 VVQLDGSKAPLDLERLHIIVSEACAGL--DDVSETRILDEALRNLYDGVSMQELSTSLVI 222
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSF-----SETIKDMYNHYNERSGLKAPLIA 117
TA + P+Y +AR+ NL + SF S T DM Y + L A +
Sbjct: 223 TARTLIEQEPNYTYASARLLCDNL-RTEALSFLGVADSATQGDMDRLYAK--ALPAYIAR 279
Query: 118 DDIYEIIMKNAACLDSE-----IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
E++ A D E I+ +RD + Y G +TL Y + E PQ M
Sbjct: 280 GVELELLDPTLAEYDLERMGKAILPERDLQFTYLGLQTLYDRYFIHSDEVRFELPQIFFM 339
Query: 173 RVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
RV++G+ ++ D AI+ Y ++S + ++PTLFNAGT RPQLSSC+L + DD +
Sbjct: 340 RVAMGLAVEETDREARAIEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LH 398
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIY +++ A++SK AGG+G +RA GSYI+GTNG S G+VP L+V NDTA V+QG
Sbjct: 399 GIYGAIQDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQG 458
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G KRKGA YLE WH DI EF+ L+KN G + R D+ A W+PDLFM+RV +G W+
Sbjct: 459 G-KRKGAVCSYLETWHMDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGDWT 517
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPY 404
LF PN+ L D +G FE+ Y YE E K K V+AQNLW ++L ETG P+
Sbjct: 518 LFSPNDVPDLHDLYGKAFEERYCAYEAMAATGELKYSKTVKAQNLWRKMLGMLFETGHPW 577
Query: 405 MLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVES 464
M FKD CN +S QQ+ G + SSNLCTEI TS E AVCNL SI LP+ V E +
Sbjct: 578 MTFKDPCNLRSPQQHAGVVHSSNLCTEITLNTSADEIAVCNLGSINLPQHVDENGL---- 633
Query: 465 HPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
+ EKLAE L+ +ID+NYY V+TAR SN RHRP+G+G+
Sbjct: 634 ----------------NLEKLAETVRTAVRMLDNVIDINYYSVDTARNSNFRHRPVGLGL 677
Query: 525 QGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGI 584
G D +A+ S +A E I Y+A+ SS++A + G YE+Y S S+GI
Sbjct: 678 MGFQDALYKQHIAYGSEDAVTFADRSMEAISYYAIDASSKLAEERGAYESYEGSLWSQGI 737
Query: 585 LQPDMWNVIPSDR------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
L D + +R DW LR+ + G+RNS ++A PTA+ + I G
Sbjct: 738 LPIDSLGKLVEERGSDYIKVDDSMTMDWTSLREAVKARGMRNSNVMAIAPTATIANITGV 797
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIP 692
++ EP N+Y + LSGEF VVN +L++DL G+W + N + Y DGSVQ I IP
Sbjct: 798 SQSIEPTYQNLYVKSNLSGEFTVVNPYLVNDLKVRGLWDSVMVNDLKYYDGSVQAIERIP 857
Query: 693 EELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLK 752
+L+ IY +E++ +V+ A R +IDQ+QSLN++++ + KK+ + W GLK
Sbjct: 858 ADLRAIYSNAFEVEPRWIVECASRRQKWIDQAQSLNLYINNASGKKLDITYRMAWYSGLK 917
Query: 753 TGMYYLRSRAAADAIKFTVDT 773
T YYLRS AA K T+DT
Sbjct: 918 T-TYYLRSLAATGTEKSTIDT 937
>gi|445432867|ref|ZP_21439540.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC021]
gi|444758205|gb|ELW82707.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC021]
Length = 944
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 314/852 (36%), Positives = 463/852 (54%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL + ++ + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALKATVNRAAEGLEGIEVEAII--DETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + ++ A + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLKFDLEKLA---ATIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ +D + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV +G+W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y +YE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+GMA+ S EA + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDTLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L + G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKDRGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK-----------------EKPEKPELVVDDETKMAQVV--- 797
LR+ A A K T++T + +KPE V +D A V
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 932
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|171463020|ref|YP_001797133.1| ribonucleotide-diphosphate reductase subunit alpha
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171192558|gb|ACB43519.1| ribonucleoside-diphosphate reductase, alpha subunit
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 990
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 308/816 (37%), Positives = 450/816 (55%), Gaps = 57/816 (6%)
Query: 28 GLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLH 87
GL T H D + + +Y GV +Q+ + A + + P Y+ + ARI + +H
Sbjct: 197 GLGT-HIDASPIVTETIKNLYDGVPMAQVYDSAILASRTLIEKDPAYSQVTARILMHVIH 255
Query: 88 KNT--KKSFSETIKDMYNHYNER---SGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDF 141
K K+ ++ Y+ Y + G+ A L+ + E + + AA L++ RD
Sbjct: 256 KEILGKEVLQGDMQAEYSTYFAKYINEGISAELLDPRMREFDLPRLAAALNAS----RDL 311
Query: 142 DYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWF 198
++Y G +TL Y L ++ + +E PQ MRV++G+ +++D AI+ Y ++S F
Sbjct: 312 QFNYLGLQTLYDRYFLHIEDRRIEMPQAFFMRVAMGLSLNELDRERRAIEFYEILSTFDF 371
Query: 199 THASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRAT 258
++PTLFN+ T RPQLSSC+L ++DD ++GIYE LKE A++SK AGG+G N+RA
Sbjct: 372 MSSTPTLFNSATTRPQLSSCYLTTVEDD-LDGIYEALKENALLSKFAGGLGNDWTNVRAL 430
Query: 259 GSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNH 318
GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN
Sbjct: 431 GSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNT 489
Query: 319 GKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-- 376
G + R D+ + W+PDLFM+RV NG+W+LF P+ L +G FE+ Y YE+
Sbjct: 490 GDDRRRTHDMSTSNWIPDLFMKRVMENGEWTLFSPSNTPDLHGKFGKAFEEAYVAYEQKA 549
Query: 377 ---EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEII 433
E K + + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI
Sbjct: 550 DRGELKPFRRIPAQQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEIT 609
Query: 434 EYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVT 493
T+ E AVCNL S+ L +H + + + D EKL
Sbjct: 610 LNTNEDEIAVCNLGSVNLT-----------AH----MTTDANGKMILDHEKLQRTVRTAM 654
Query: 494 ENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFET 553
L+ +ID+NYY V AR SNL+HRP+G+G+ G D + + + S EA + E
Sbjct: 655 RMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHMQRIPYASDEAVKFADSSMEA 714
Query: 554 IYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGV 602
+ Y+A + S+E+A + G Y TY S +GIL D ++ ++R DW
Sbjct: 715 VCYYAYQASNELAEERGVYSTYKGSLWDRGILPQDSVALLAAERGGYLEVDSSSTMDWNG 774
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
LR I + G+RNS VA PTA+ S I+G + C EP N++ + LSGEF VVN++L+
Sbjct: 775 LRARIKQYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLFVKSNLSGEFTVVNEYLVR 834
Query: 663 DLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYID 722
DL + G+W + + Y DG++ KI IP++L+ +Y T +E+ LV+ A R +ID
Sbjct: 835 DLKDRGLWDEVMIADLKYFDGTLSKIDRIPQDLRDLYATAFEVDPTWLVEAASRRQKWID 894
Query: 723 QSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEK 782
Q+QSLNI+M + KK+ + W RGLKT YYLR+ AA K TV +
Sbjct: 895 QAQSLNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVASGQLNAVSSG 953
Query: 783 PELVVDDETKMAQV-----VCSL----TNREECMAC 809
+ D V VC++ EEC AC
Sbjct: 954 GGVNGTDAAAAGGVEADGPVCTMRPGDAGFEECEAC 989
>gi|300703001|ref|YP_003744603.1| ribonucleoside-diphosphate reductase subunit alpha [Ralstonia
solanacearum CFBP2957]
gi|299070664|emb|CBJ41959.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum CFBP2957]
Length = 987
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 304/764 (39%), Positives = 429/764 (56%), Gaps = 51/764 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN----- 89
DP + ++ +Y+GV SQ+ + A A + P Y+ ARI + + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 90 -TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDYFG 147
T+ + D + + +R G+ A L+ D + + + K A LD+ RD ++Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFNYLG 297
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L + K +E PQ MRV++G+ ++ID AI+ Y ++S F ++PT
Sbjct: 298 LQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSSTPT 357
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+I+G
Sbjct: 358 LFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 416
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGK 379
D+ A W+PDLFM+RV NG+W+LF P+ L D G FE+ Y YE E K
Sbjct: 476 THDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEIK 535
Query: 380 AKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+ +
Sbjct: 536 LFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS 595
Query: 440 ETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
E AVCNL S+ L V++ D GS D +KL + L+
Sbjct: 596 EIAVCNLGSVNLVAHLVQQAD-----------GSYA-----LDHDKLKKTVRTAMRMLDN 639
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY V+ AR SNLRHRP+G+GV G D +L + + + A Q E + Y+A
Sbjct: 640 VIDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANDAAVQFADTSMEAVCYYA 699
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMI 607
S+E+A + G Y TY S +GIL D ++ +R DW LR I
Sbjct: 700 YWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLETDLSSTMDWDSLRGRI 759
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 760 QQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKAR 819
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+QSL
Sbjct: 820 GLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSL 879
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + K + + W RGLKT YYLR+ A K TV
Sbjct: 880 NIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 922
>gi|124268398|ref|YP_001022402.1| ribonucleotide-diphosphate reductase subunit alpha [Methylibium
petroleiphilum PM1]
gi|124261173|gb|ABM96167.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
PM1]
Length = 971
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 302/796 (37%), Positives = 450/796 (56%), Gaps = 50/796 (6%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTE-HCDPVLVSQKVCAGVYKGVTTSQLDEL 59
++V+ R G++ + ++ A ++ L +E P+L + +Y GV ++ +
Sbjct: 150 LHVIDR-GQRVPLDTGRLQALVESACANLGSEVQAAPILAETQ--RNLYDGVPIDEVYKA 206
Query: 60 AAETAAAMTTNHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAP 114
A A + P Y AR+ + + + + E ++ Y Y + G++A
Sbjct: 207 AILAARTLIEKDPAYTRATARLLLHTIRREILGGEVLHEEMQQRYADYFPGFIKQGVEAE 266
Query: 115 LIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
L+ + + + ++ L + DRD +DY G +TL Y L V+ +E PQ MRV
Sbjct: 267 LLDERLMQYDLRR---LGEALKADRDLQFDYLGLQTLYDRYFLHVRKARIELPQAFFMRV 323
Query: 175 SIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGI 231
++G+ +++D AI+ Y ++S F ++PTLFN+GT R QLSSC+L + DD ++GI
Sbjct: 324 AMGLALNEVDREARAIEFYEVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGI 382
Query: 232 YETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGG 291
YE +KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG
Sbjct: 383 YEAIKENALLSKFAGGLGNDWTPVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG- 441
Query: 292 KRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLF 351
KRKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM RV G W+LF
Sbjct: 442 KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMRRVIEGGDWTLF 501
Query: 352 CPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYML 406
P+ L D +G FE+ YT YE+ E K K V A++LW ++L+ ETG P++
Sbjct: 502 SPSTCPDLHDKFGIAFEQAYTAYEQKADRGELKLYKRVPAKDLWRKMLSMLFETGHPWIT 561
Query: 407 FKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHP 466
FKD CN +S QQ++G + SSNLCTEI T+ +E AVCNL S+ L + +
Sbjct: 562 FKDACNVRSPQQHVGVVHSSNLCTEITLNTNGSEIAVCNLGSVNLAQHLMH--------- 612
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
G++ D KL + + L+ +ID+NYY V+ AR SNLRHRP+G+GV G
Sbjct: 613 -------GAEGLEIDHAKLRKTVSTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGVMG 665
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D+ L +A+ S +A + E + YHA S+E+A + G Y +Y S +GIL
Sbjct: 666 FQDSLYQLRIAYASQQAVEYADRSMEAVCYHAYWASTELAEERGRYSSYKGSLWDRGILP 725
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D +++ R DW LR I ++G+RNS VA PTA+ S I+G +
Sbjct: 726 IDSLDLLAEQRGGYVDVDRSTSLDWDALRARIQQHGMRNSNCVAIAPTATISNIIGVDAS 785
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP SN+ + LSGEF V+N++L+ DL ++G+W + + + DGS+++I +PEEL
Sbjct: 786 IEPSFSNLSVKSNLSGEFTVINEYLVRDLKKLGLWDDVMVMDLKHFDGSLRRIDRVPEEL 845
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
K +Y T +E++ LV+ A R +IDQ+QSLNI+M + KK+ + W RGLKT
Sbjct: 846 KSLYATAFEVEPTWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWQRGLKT-T 904
Query: 756 YYLRSRAAADAIKFTV 771
YYLR+ A A K TV
Sbjct: 905 YYLRTVGATHAEKSTV 920
>gi|421895461|ref|ZP_16325862.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum MolK2]
gi|206586626|emb|CAQ17212.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum MolK2]
Length = 987
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 304/767 (39%), Positives = 430/767 (56%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
+ DP + ++ +Y+GV SQ+ + A A + P Y+ ARI + + +
Sbjct: 180 DAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ + D + + +R G+ A L+ D + + + K A LD+ RD ++
Sbjct: 240 GEEVTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + K +E PQ MRV++G+ ++ID AI+ Y ++S F +
Sbjct: 295 YLGLQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSS 354
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV NG+W+LF P+ L D G FE+ Y YE
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARG 532
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 533 EITLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L V++ D GS D +KL + I
Sbjct: 593 NDSEIAVCNLGSVNLVAHLVQQAD-----------GSYA-----LDHDKLKKTVRIAMRM 636
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+GV G D +L + + + A Q E +
Sbjct: 637 LDNVIDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANEAAVQFADTSMEAVC 696
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y TY S +GIL D ++ +R DW LR
Sbjct: 697 YYAYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSTMDWDSLR 756
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 757 GRIQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 816
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+
Sbjct: 817 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQA 876
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + K + + W RGLKT YYLR+ A K TV
Sbjct: 877 QSLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 922
>gi|152979866|ref|YP_001354669.1| ribonucleotide-diphosphate reductase subunit alpha
[Janthinobacterium sp. Marseille]
gi|151279943|gb|ABR88353.1| ribonucleoside-diphosphate reductase alpha chain [Janthinobacterium
sp. Marseille]
Length = 963
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 299/800 (37%), Positives = 447/800 (55%), Gaps = 57/800 (7%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V DG++ + +++ + GL +H D + + +Y GV +L + A
Sbjct: 155 VTEDGQRRPLDMNQVRDLINAACIGLE-KHVDAEAILHETVKNLYDGVPVEELHKSAILA 213
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y+++ AR+ +H K+ F + D Y E + G++A L
Sbjct: 214 ARALMEKDPAYSTVTARLL---MHTIRKEVFGLEVAQADAPAQYLEYFPKFIKKGIEAEL 270
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ + + +K L ++ +RD + Y G +TL Y L ++ +E PQ MRV+
Sbjct: 271 LDAKLGQFDLKK---LGDALVPERDLQFGYLGLQTLYDRYFLHIRDTRIEMPQAFYMRVA 327
Query: 176 IGIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++I + AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 328 MGLALNEINREERAIEFYNLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LDGIY 386
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E +KE A+++K AGG+G +R+ G++I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 387 EAIKENALLAKYAGGLGNDWTPVRSLGAHIKGTNGRSQGVVPFLKVVNDTAVAVNQGG-K 445
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL+L+KN G + R D+ A W+PDLFM+RV G+W+LF
Sbjct: 446 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 505
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P++A L D G FE YT YE E K K +QA +LW ++L+ ETG P++ F
Sbjct: 506 PSDAPDLHDKVGKAFEAAYTGYEAKAARGELKLFKKIQALDLWRKMLSMLFETGHPWITF 565
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD CN +S QQ++G + SSNLCTEI T+ +E AVCNL S+ +P +++ +
Sbjct: 566 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNMPAHMKDGQL------- 618
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G
Sbjct: 619 -------------DHVKLQKTVRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGIMGF 665
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D ++ + + S EA Q E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 666 QDCLHMMRIPYASDEAVQFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQ 725
Query: 588 DMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ +R DW LR+ I + G+RNS VA PTA+ S I+G + C
Sbjct: 726 DSLKLLQEERGGYLEADLTETLDWTPLRERIKQFGMRNSNCVAIAPTATISNIIGVSACI 785
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF +N++L+ DL G+W + + + Y DGS+ KI IP++L+
Sbjct: 786 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMISDLKYFDGSLAKIDRIPQDLR 845
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
IY T +E++ LV+ A R +IDQ+QSLNI+M + KK+ + W RGLKT Y
Sbjct: 846 DIYSTAFEVEPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWLRGLKT-TY 904
Query: 757 YLRSRAAADAIKFTVDTSVF 776
YLR+ A K T T
Sbjct: 905 YLRTMGATHTEKSTSKTGAL 924
>gi|90022103|ref|YP_527930.1| ribonucleotide-diphosphate reductase subunit alpha [Saccharophagus
degradans 2-40]
gi|89951703|gb|ABD81718.1| ribonucleoside-diphosphate reductase class Ia alpha subunit
[Saccharophagus degradans 2-40]
Length = 969
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 302/808 (37%), Positives = 448/808 (55%), Gaps = 65/808 (8%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
VV +G + + D+I + + GL D +L ++ +Y GV+ + L+
Sbjct: 154 VVDHNGDRHPLDIDRIKTVVAEACAGLKDVDADAIL--KEAMRSLYDGVSLTDLNTALVI 211
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNT-------KKSFSETIKDMYNH----YNERSGL 111
+A + P+Y +R+ + L +++ ++ +Y Y E+ G+
Sbjct: 212 SARTLVEKEPNYTYATSRLLMDKLRAEALSFLGIAEEATQAEMETLYAKTLPAYIEK-GI 270
Query: 112 KAPLIADDI--YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ LI+ D+ Y++ M L + +I +RD + Y G +TL Y L +E PQ
Sbjct: 271 ELDLISPDLASYDLNM-----LGNALIAERDLQFTYLGLQTLYDRYFLHSNDVRIELPQI 325
Query: 170 MLMRVSIGI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDD 226
MRV++G+ ++ + A++ Y ++S + ++PTLFNAGT RPQLSSC+L + DD
Sbjct: 326 FFMRVAMGLAANEENKNERAVEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD 385
Query: 227 SIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYV 286
+ GIY +++ A++SK AGG+G +R G+YI+GTNG S G+VP L+V NDTA V
Sbjct: 386 -LHGIYGAMQDNAMLSKWAGGLGNDWTPVRGLGAYIKGTNGKSQGVVPFLKVANDTAVAV 444
Query: 287 DQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNG 346
+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV
Sbjct: 445 NQGG-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVFEEK 503
Query: 347 QWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIETG 401
+W+LF PN+ L D +G FE Y YER+ A K+ V+A +LW ++L ETG
Sbjct: 504 EWTLFSPNDVPDLHDLFGRAFEDRYEEYERQAAAGKIRVHKKVRALDLWRKMLGMLFETG 563
Query: 402 TPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTE-TAVCNLASIALPRFVREKDV 460
P++ FKD CN +S QQ+ G + SSNLCTEI T E AVCNL SI L + + + +
Sbjct: 564 HPWITFKDACNLRSPQQHAGVVHSSNLCTEITLNTKANEEIAVCNLGSINLAQHIVDGKL 623
Query: 461 PVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
D EKLA+ L+ +ID+NYY VE+AR SN+RHRP+
Sbjct: 624 --------------------DEEKLAQTVKTAVRMLDNVIDINYYAVESARTSNMRHRPV 663
Query: 521 GIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPV 580
G+G+ G D + +++ S +A E I YHA+K SSE+A + G Y T+ S
Sbjct: 664 GLGLMGFQDALYKMNISYSSDDAVTFADRSMEAISYHAIKASSELAKERGSYSTFDGSLW 723
Query: 581 SKGILQPDMWNVIPSDRW------------DWGVLRDMISKNGVRNSLLVAPMPTASTSQ 628
SKGIL D +++ +R DW LR+ + G+RNS ++A PTA+ +
Sbjct: 724 SKGILPLDSLDLLIENRGEKFIKVDKSSTHDWDTLRETVKTQGMRNSNVMAIAPTATIAN 783
Query: 629 ILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKI 688
I G ++ EP N+Y + LSGEF VVN +L+HDL E G+W + N + Y +GS+QKI
Sbjct: 784 ITGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVHDLKERGLWDSVMVNDLKYYEGSLQKI 843
Query: 689 PEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWS 748
IPE+LK +Y T +E++ +V+ A R +IDQ+QSLN+++ N KK+ + W
Sbjct: 844 DRIPEDLKALYSTAFEVEPRWIVEAASRRQKWIDQAQSLNLYIAGANGKKLDITYRMAWY 903
Query: 749 RGLKTGMYYLRSRAAADAIKFTVDTSVF 776
GLKT YYLR+ +A K TV +
Sbjct: 904 SGLKT-TYYLRALSATTTEKSTVTSGTL 930
>gi|226953557|ref|ZP_03824021.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
sp. ATCC 27244]
gi|226835694|gb|EEH68077.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
sp. ATCC 27244]
Length = 944
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 315/852 (36%), Positives = 459/852 (53%), Gaps = 73/852 (8%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + G+ + + D +TA ++ S GL E D + + +Y GV S +
Sbjct: 122 LQITDAKGQLQPLDLDALTATIETASAGL--EGIDVQAIVDETVKNLYNGVKESDVATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR+ + L +T F ++T++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLCNEL-VSTGLEFLGLPTDTLEGDALETFLKKGIELDLL 238
Query: 117 ADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSI 176
+ D+ + A L + I +R + Y G +TL Y + G E PQ MRVS+
Sbjct: 239 SPDLLNF---DLAKLAAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYE 233
G+ ++ + AI+ Y+++S + ++PTLFN+GT RPQLSSC+L + DD + IY
Sbjct: 296 GLALNEENKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCP 353
KGA YLE WH D+ EFL L+KN G + R D+ A WVPDLFM+RV + +W+LF P
Sbjct: 414 KGAVCAYLETWHLDVEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDAEWTLFTP 473
Query: 354 NEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQIETGTPYMLFKD 409
+E L D GAEF + Y HYE K + K V+A++LW ++L+ ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAHYEAVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ E AVCNL SI L + V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
+ D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------QGGVLDREKLARTIKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPD- 588
+G+A+ S A + E I Y+A++TSS++A + G Y T+ S +GIL D
Sbjct: 634 ALYEMGIAYGSDAAVDFADESMEVISYYAIQTSSDLALERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDTLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKM 697
P N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQKI IPEELK
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYY 757
I+ T +E+ +VD A R +IDQ+QSLN+++ N KK+ + W RGLKT YY
Sbjct: 814 IFATAFEVDTRWIVDAASRRQKWIDQAQSLNLYIAGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVFK-------EKPEKPELVVDDETKMAQV-------------V 797
LR+ A A K T++T E P V+D+ AQV
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPASVEAPVVAAQAVEDKKPEAQVEEDGFTTAAPVPMA 932
Query: 798 CSLTNREECMAC 809
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|300022336|ref|YP_003754947.1| ribonucleoside-diphosphate reductase subunit alpha [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524157|gb|ADJ22626.1| ribonucleoside-diphosphate reductase, alpha subunit [Hyphomicrobium
denitrificans ATCC 51888]
Length = 956
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 315/832 (37%), Positives = 446/832 (53%), Gaps = 76/832 (9%)
Query: 20 ARLKKL----SYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYA 75
ARL+KL GL+ + +L + +Y G+T +L + A + P+Y
Sbjct: 158 ARLRKLIEESCAGLADVSAEAILSETQ--RNLYDGITRDELADAPVLAARTLIETEPNYT 215
Query: 76 SLAARIAVSNLHK--------NTKKSFSETIKDMYNHYNERSGLKAPLIADDI-YEIIMK 126
+ AR+ + L + T ++ + + Y Y R+ + ++AD + E+
Sbjct: 216 FVTARLLMDKLRREALSFVAGRTDEARQSEMGERYPEYF-RAFIAKGIVADLLDPELARF 274
Query: 127 NAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDID-- 184
+ L + +RD + Y G +TL Y L+ G E PQ MRV++G+ +ID
Sbjct: 275 DLDRLGGALKPERDGIFQYLGLQTLYDRYFLQTHGIRFELPQAFFMRVAMGLALREIDRE 334
Query: 185 -SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISK 243
AI+ Y ++S F ++PTLFNAGTPRPQLSSCFL + DD ++GI++++K+ A+++K
Sbjct: 335 AKAIEFYDLISTFDFMCSTPTLFNAGTPRPQLSSCFLTTVPDD-LDGIFKSIKDNALLAK 393
Query: 244 SAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEP 303
+GG+G +R G++I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE
Sbjct: 394 YSGGLGNDWTRVRGLGAHIKGTNGESQGVVPFLKVANDTAIAVNQGG-KRKGAVCAYLET 452
Query: 304 WHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCW 363
WH DI EFL+L+KN G + R D+ A W+PDLFM+RV +GQW+LF P+E L D +
Sbjct: 453 WHIDIEEFLDLRKNAGDDRRRTHDMNTAHWIPDLFMQRVAEDGQWTLFSPDETPDLHDLY 512
Query: 364 GAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQ 418
G F + Y YE E K + V+A +LW +LT ETG P++ FKD CN +S QQ
Sbjct: 513 GTAFAERYEAYEEKAERMEMKVARRVRAVDLWRRMLTMLFETGHPWITFKDPCNLRSPQQ 572
Query: 419 NLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNR 478
+ G + SSNLC EI TS E AVCNL SI L V V
Sbjct: 573 HCGIVHSSNLCAEITLNTSNDEVAVCNLGSINLVAHVTNDGV------------------ 614
Query: 479 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAF 538
DF+KL L+ +ID+N+Y + ARRSNLRHRP+G+G+ G D L + +
Sbjct: 615 --DFDKLERTVKTAMRMLDNVIDINFYTIPEARRSNLRHRPVGMGLMGFQDALQALRINY 672
Query: 539 ESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR- 597
S EA E I +HA+ S ++AA+ G Y ++ S S+GIL D ++ S R
Sbjct: 673 GSEEAVAFADTSMEAISFHAISASVDLAAERGRYPSFDGSLWSQGILPIDSIELLKSARG 732
Query: 598 ----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
DW LRD + G+RNS +A PTA+ S I G + EP N+Y +
Sbjct: 733 TDLRLDTSSTLDWDGLRDRVRTTGMRNSNTMAIAPTATISNICGVAQSIEPAFRNLYVKS 792
Query: 648 VLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQ 707
+SG+F VVN L+ DL G+W + + + Y DGS+ I IPE+LK +Y T +EI
Sbjct: 793 NMSGDFTVVNPFLVRDLKARGLWDEVMISDLKYFDGSLGAIDRIPEDLKALYATAFEIDA 852
Query: 708 MTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAI 767
LVD A R +IDQ QSLN+++ PN +K+ +L+ W RGLKT YYLRS++A
Sbjct: 853 HWLVDAAARRQKWIDQGQSLNLYIAAPNGRKLDALYRLAWERGLKT-TYYLRSQSATHVE 911
Query: 768 KFT----------VDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
K T V +SV PE E MA C L + C AC
Sbjct: 912 KSTLKGTDGKLNAVSSSVHHSAPENIE-------AMAGKAC-LIDDPTCEAC 955
>gi|171057073|ref|YP_001789422.1| ribonucleotide-diphosphate reductase subunit alpha [Leptothrix
cholodnii SP-6]
gi|170774518|gb|ACB32657.1| ribonucleoside-diphosphate reductase, alpha subunit [Leptothrix
cholodnii SP-6]
Length = 958
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 302/806 (37%), Positives = 443/806 (54%), Gaps = 62/806 (7%)
Query: 36 PVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN------ 89
PVL + +Y GV+ ++ + + A + P Y+ + AR+ + + ++
Sbjct: 182 PVLAETR--RNLYDGVSIDEVYKASILAARTLIEKDPSYSRVTARLLMHTIRRDVLGEEV 239
Query: 90 TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFK 149
T+ + D + + ++ G+ A L+ + + + + A L + + +RD ++DY G +
Sbjct: 240 TQAEMAARYADYFPAFIKK-GVDAELLDERMAQF---DLARLGAALKAERDLNFDYLGLQ 295
Query: 150 TLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLF 206
TL Y L ++ + +E PQ MRV++G+ ++ID AI+ Y ++S F ++PTLF
Sbjct: 296 TLYDRYFLHIRKQRIEMPQAFFMRVAMGLALNEIDREARAIEFYEVLSAFDFMSSTPTLF 355
Query: 207 NAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTN 266
NAGT R QLSSC+L + DD +EGIY+ +K+ A++SK AGG+G +RA GS+I+GTN
Sbjct: 356 NAGTRRSQLSSCYLTTVPDD-LEGIYDAIKDNALLSKFAGGLGNDWTPVRALGSHIKGTN 414
Query: 267 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R
Sbjct: 415 GESQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTH 473
Query: 327 DLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKV--- 383
D+ A W+PDLFM+RV G W+LF P L D +G FE YT YE ++
Sbjct: 474 DMNTANWIPDLFMKRVMEGGDWTLFSPANCPDLHDLFGTAFEAAYTAYEARADRGEITFF 533
Query: 384 --VQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTET 441
V+A +LW +IL+ ETG P++ FKD CN +S QQ++G + SSNLCTEI T+ E
Sbjct: 534 KRVRAVDLWRKILSMLFETGHPWITFKDACNVRSPQQHVGVVHSSNLCTEITLNTNAGEI 593
Query: 442 AVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIID 501
AVCNL S+ L + V++ +V D KL L+ +ID
Sbjct: 594 AVCNLGSVNLAQHVKDGEV--------------------DQAKLCRTVTTAMRMLDNVID 633
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKT 561
+NYY V+ AR SNLRHRP+G+G+ G D L + + S EA + E + YHA
Sbjct: 634 INYYAVKKARDSNLRHRPVGLGIMGFQDALYQLRVPYASNEAVEFADRSMEAVCYHAYWA 693
Query: 562 SSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMISKN 610
S+E+AA+ G Y TY S +GIL D ++ R DW LR I++
Sbjct: 694 STELAAERGRYATYRGSLWDRGILPIDSIALLAEQRGGYLDVDTRTTLDWDALRARIAQY 753
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIW 670
G+RNS VA PTA+ S I+G + EP N+ + LSGEF VVN++L+ DL +G+W
Sbjct: 754 GMRNSNCVAIAPTATISNIIGVDASIEPCFGNLSVKSNLSGEFTVVNEYLVRDLKALGLW 813
Query: 671 SPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIH 730
+ + + DGS+++I +PEELK +Y T +E++ LV+ A R +IDQ+QSLNI+
Sbjct: 814 DDVMVMDLKHFDGSLRRIDRVPEELKRLYATAFEVETQWLVEAAARRQKWIDQAQSLNIY 873
Query: 731 MDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKE-------KPEKP 783
M + KK+ + W RGLKT YYLR+ A A K TV +P
Sbjct: 874 MAGASGKKLDETYKLAWLRGLKT-TYYLRTMGATHAEKSTVKAGSMNAVSNGAHGSASEP 932
Query: 784 ELVVDDETKMAQVVCSLTNREECMAC 809
V +E C++ + C AC
Sbjct: 933 AAVSSNEPATDVKFCAIDD-PSCEAC 957
>gi|337281113|ref|YP_004620585.1| ribonucleoside-diphosphate reductase subunit alpha [Ramlibacter
tataouinensis TTB310]
gi|334732190|gb|AEG94566.1| Candidate ribonucleoside-diphosphate reductase, alpha chain
[Ramlibacter tataouinensis TTB310]
Length = 968
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 301/791 (38%), Positives = 442/791 (55%), Gaps = 57/791 (7%)
Query: 8 GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAM 67
G + + ++ ++ GL + P ++ + +Y GV ++ + + A +
Sbjct: 154 GERVPLDLGRLKGLIEAACAGLGAD-VKPDPIAAETMRNLYDGVPIDEVYKASILAARTL 212
Query: 68 TTNHPDYASLAARIAVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIADD 119
PDY AR+ LH K+ I+ +M Y + + G++A L+ +
Sbjct: 213 IEKDPDYTYATARLL---LHTIFKEVLGRDIEPAEMAASYADYFPGFIKKGVEAELLNPE 269
Query: 120 IYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH 179
+ + ++ L + + DRD +DY G +TL Y L V+ +E PQ MRV++G+
Sbjct: 270 LLQYDLQR---LGAALKADRDLKFDYLGLQTLYDRYFLHVRKTRIELPQAFFMRVAMGLA 326
Query: 180 KDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
++ID AI+ Y ++S F ++PTLFN+GT R QLSSC+L + DD ++GIYE++K
Sbjct: 327 LNEIDREARAIEFYEVLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LDGIYESIK 385
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
E A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 386 ENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGA 444
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
YLE WH DI EFL L+KN G + R D+ A W+PDLFM RV G+W+LF P+
Sbjct: 445 VCTYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMRRVMEKGEWTLFSPSSV 504
Query: 357 SGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTC 411
L D +GA FEK Y YE E K K VQA ++W ++L+ ETG P++ FKD C
Sbjct: 505 PDLHDLFGAAFEKAYVAYEEKAKRGEIKPSKTVQATDMWRKMLSMLFETGHPWITFKDAC 564
Query: 412 NRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVG 471
N +S QQ+ G + SSNLCTEI TS ETAVCNL SI L + +++ V
Sbjct: 565 NVRSPQQHAGVVHSSNLCTEITLNTSDAETAVCNLGSINLLQHLKDGGV----------- 613
Query: 472 SRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
D KL A L+ +ID+NYY V+ AR SNLRHRP+G+GV D
Sbjct: 614 ---------DHAKLKRTIATAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGVMAFQDAL 664
Query: 532 ILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN 591
L + + S A + E + Y+A S+E+A + G Y +Y S KG+L PD
Sbjct: 665 YELRIPYASQAAVEFADRSMEAVCYYAYWASTELARERGRYSSYKGSLWDKGVLPPDTLE 724
Query: 592 VIPSDR--W---------DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
++ R W DW LR I+++G+RNS VA PTA+ S I+G + EP
Sbjct: 725 LLAQQRGGWVEVDRSATLDWDALRKKIAQDGMRNSNCVAIAPTATISNIIGVDASIEPCF 784
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYK 700
N+ + LSGEF V+N +L+ DL +G+W + + + DGS++ I +P+++K +Y
Sbjct: 785 GNLSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFDGSLRPIDRVPQDVKSLYA 844
Query: 701 TVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRS 760
T +E++ + LV+ A R +IDQ+QSLNI+M + KK+ + W+RGLKT YYLR+
Sbjct: 845 TAFEVEPVWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDETYKLAWTRGLKT-TYYLRT 903
Query: 761 RAAADAIKFTV 771
+A + K TV
Sbjct: 904 ISATHSEKSTV 914
>gi|405945196|gb|EKC17202.1| Ribonucleoside-diphosphate reductase subunit alpha [Crassostrea
gigas]
Length = 957
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 308/796 (38%), Positives = 453/796 (56%), Gaps = 69/796 (8%)
Query: 8 GRQEAVHF-DK--ITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETA 64
G ++ +HF DK + + KK+S GL ++ D V VC G+Y GV ++D L +
Sbjct: 133 GEEDILHFFDKQLMYEKFKKISAGL--KNVDSKEVLNLVCKGLYNGVHQKEIDHLTLKEI 190
Query: 65 AAMTTNHPDYASLAARIAVSNLHK----------NTKKSFSETIKDMYNHYNERSGLKAP 114
H DY ARI + L+K N +KS+ + + Y H G++
Sbjct: 191 EYKMEEHYDYGYFGARIVLDQLYKGVLHCSFASQNLEKSYHKRFAE-YVH----QGVEEE 245
Query: 115 LIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK------VVERPQ 168
++ + + + ++ L ++ +RD +DY G K L YLLK + K + E PQ
Sbjct: 246 ILTEKMRDFDLE---LLAKALVPERDLLFDYLGVKILYDRYLLKTRNKDEQKKLIFELPQ 302
Query: 169 HMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKD 225
M MRV++G+ ++ D A++ Y+++S + ++PTLFN+GT QLSSC+ + +
Sbjct: 303 WMWMRVAMGLAMEEEDKNARALEFYNVLSNHYLISSTPTLFNSGTRFMQLSSCY-INLVG 361
Query: 226 DSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DS+ I++ + A +SK AGGIG +RATGS I+GTNG S+GI+P +++FND A
Sbjct: 362 DSLSEIFKNFSDDAQLSKWAGGIGTDWTGVRATGSVIKGTNGASSGIIPFIKIFNDIAIA 421
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTN 345
V+QGG KR+GA A YLE WH D EFL LKKN G E RA D+ A++V DLFM+RV+ +
Sbjct: 422 VNQGG-KRRGAMAAYLENWHLDTEEFLELKKNTGDERRRAHDIHPAIFVSDLFMKRVEED 480
Query: 346 GQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAK-KVVQAQNLWFEILTSQIETGTPY 404
GQW LF P++A L + +G FE+ Y E+ KVV+A++LW ++LT ETG P+
Sbjct: 481 GQWMLFSPDDARFLHENYGKFFEEKYLELEKNPPINHKVVRAKDLWRKMLTMLYETGHPW 540
Query: 405 MLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVES 464
+ FKD N +S Q ++G + SSNLCTEI TS ETAVCNLAS+ L R VR+ +
Sbjct: 541 ITFKDAINVRSPQDHVGMVHSSNLCTEITLNTSTEETAVCNLASLNLSRMVRDGKLD--- 597
Query: 465 HPSRIVGSRGSKNRFFDFEKLAEVT-AIVTENLNKIIDVNYYPVETARRSNLRHRPIGIG 523
EKL E T A L+ +ID+N+YP E ARR+N+RHRP+G+G
Sbjct: 598 ------------------EKLMETTIATGMRMLDCVIDINFYPTEEARRANVRHRPVGLG 639
Query: 524 VQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKG 583
V G D LG+ + S + E I YHA+ TSS++A ++G Y TY S SKG
Sbjct: 640 VMGYHDALFKLGIPYSSDKQVDFADHTMEIISYHAILTSSKLAKEKGAYSTYEGSKWSKG 699
Query: 584 ILQPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
IL D +++ +R DW +R I+K+G+RNS +A PTA+ + I G
Sbjct: 700 ILPLDTLDLLEENRGQKIEINRAYRMDWDKVRRHIAKHGMRNSNCMAIAPTATIANIAGV 759
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIP 692
C EP NIY + LSG F ++N +L+ L E+ +W+ I ++I DGS+ I EIP
Sbjct: 760 VPCVEPIYKNIYMKENLSGNFFIINNYLIDRLKEINVWNRNIIDEIKLADGSIMNIKEIP 819
Query: 693 EELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLK 752
+ LK ++ V+EI Q ++ A R +IDQS S N+ +D + K+++ ++F W G+K
Sbjct: 820 DHLKNEFREVFEIDQKWIIKAAAARSKWIDQSASTNLFIDTRSGKEISDIYFLAWKMGMK 879
Query: 753 TGMYYLRSRAAADAIK 768
T YYLRSRA + K
Sbjct: 880 T-TYYLRSRAVSQITK 894
>gi|345302305|ref|YP_004824207.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodothermus
marinus SG0.5JP17-172]
gi|345111538|gb|AEN72370.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodothermus
marinus SG0.5JP17-172]
Length = 926
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 297/796 (37%), Positives = 453/796 (56%), Gaps = 57/796 (7%)
Query: 5 KRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETA 64
+ DG + + + AR++ GL + DP LV +++ VY G+ +LD+ A
Sbjct: 120 RADGTEAPFPHEALRARIEAACDGL--DDVDPELVREELLRTVYPGIPEDELDKALILAA 177
Query: 65 AAMTTNHPDYASLAARIAVSNLHKNT------KKSFSETIKDMYNHYNERSGLKAPLIAD 118
PDY +AAR+ + L++ + T + + Y E G++ + +
Sbjct: 178 RTHIEREPDYTYVAARLLLDALYREVFGRPVPPAEQAATCRRGFRAYLE-HGIRLGRLDE 236
Query: 119 DIYEI--IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLL-KVQGKVVERPQHMLMRVS 175
+ + + + AA L E RD + + G +TL YLL + +G+ E PQ++ MRV+
Sbjct: 237 RLLQTFDLDRLAAALRPE----RDRQFTFLGLQTLYDRYLLHEPEGRRFELPQYLWMRVA 292
Query: 176 IGI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ D AI+ Y ++S F +++PTLFNAGTP PQLSSC+L ++DD + I+
Sbjct: 293 MGLALAEDDPTARAIQFYELLSSFRFMNSTPTLFNAGTPHPQLSSCYLTTVQDD-LGAIF 351
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ +++ A++SK AGG+G +RA G++IRGTNG S G++P L++ NDTA V+QGG K
Sbjct: 352 KAIRDNALLSKWAGGLGNDWTPVRALGAHIRGTNGRSQGVIPFLKIVNDTAVAVNQGG-K 410
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL L++N G E R D+ A W+PDLFM+RV+ W+LF
Sbjct: 411 RKGAVCAYLEVWHLDIEEFLELRRNTGDERRRTHDMNTACWIPDLFMQRVRERRHWTLFS 470
Query: 353 PNEASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIETGTPYMLF 407
P+E L D +G F + Y HYERE +A ++ V+A +LW ++L+ ETG P++ F
Sbjct: 471 PDEVPDLHDLYGRAFRERYEHYEREAEAGRIRNWRRVEAVDLWRKMLSMLFETGHPWLTF 530
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD CN +S Q ++G + SSNLCTEI TSP E AVCNL SI L V E+
Sbjct: 531 KDPCNIRSPQDHVGIVHSSNLCTEITLNTSPEEVAVCNLGSINLVAHVDEQGE------- 583
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
D ++L + L+ +ID+N+YP+ AR SNLRHRPIG+G+ G
Sbjct: 584 ------------LDRDRLRDTIRTAVRMLDNVIDLNFYPIPEARTSNLRHRPIGLGLMGF 631
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL-- 585
D G+++ S A ++ ++ E I Y A + SS++A + G Y T+ S +G+L
Sbjct: 632 QDVLYRRGLSYASEAAVEMADELMEFIAYCAYEASSDLAVERGAYPTFKGSKWDRGLLPL 691
Query: 586 ------QPDMWNVIP---SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
+ + +P + R DW LR+ I + G+RN+ ++A PTA+ + I G +
Sbjct: 692 DTLDLLEAERGEPVPVPRTARLDWDALREKIRRQGMRNANVLAIAPTATIANICGVSPSI 751
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF +N +L+ DL G+W + + + Y DGSVQ+I IP ELK
Sbjct: 752 EPTYKNLYVKSNLSGEFTQLNPYLVRDLKARGLWDEEMLDDLKYYDGSVQEIDRIPPELK 811
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
Y+T +EI+ L++ A R +IDQSQSLN+++ +P+ +K++ ++ W GLKT Y
Sbjct: 812 ERYRTAFEIEPRWLIECAARRQKWIDQSQSLNLYLAEPSGRKLSEMYQLAWRLGLKT-TY 870
Query: 757 YLRSRAAADAIKFTVD 772
YLR+ AA K T+D
Sbjct: 871 YLRALAATQIEKSTLD 886
>gi|398809048|ref|ZP_10567903.1| ribonucleoside-diphosphate reductase, alpha subunit [Variovorax sp.
CF313]
gi|398086342|gb|EJL76961.1| ribonucleoside-diphosphate reductase, alpha subunit [Variovorax sp.
CF313]
Length = 971
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 301/791 (38%), Positives = 441/791 (55%), Gaps = 51/791 (6%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
+G A+ +++ ++ GL +V++ + +Y GV ++ + + A
Sbjct: 156 NGELVALDLNELKGLIESACEGLGDSITAAPIVAETM-RNLYDGVPLDEVYKASILAART 214
Query: 67 MTTNHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAPLIADDIY 121
+ PDY AR+ + + K ++ Y Y + G++ L+ + +
Sbjct: 215 LIEKDPDYTFATARLLLHTIFKEIIGREVMPVERATAYADYFPQFIKKGVENELLDEKLL 274
Query: 122 EIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKD 181
+ + L + + +RD +DY G +TL Y L V+ +E PQ MRV++G+ +
Sbjct: 275 QYDLPR---LGAALKAERDNQFDYLGLQTLYDRYFLHVRKTRIELPQAFFMRVAMGLSLN 331
Query: 182 DIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKEC 238
+ID AI+ Y ++S F ++PTLFNAGT R QLSSC+L + DD ++GIYE++KE
Sbjct: 332 EIDREARAIEFYEVLSSFDFMSSTPTLFNAGTLRSQLSSCYLTTVPDD-LDGIYESIKEN 390
Query: 239 AVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 391 ALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAVC 449
Query: 299 VYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASG 358
YLE WH DI EFL L+KN G + R D+ A W+PDLFM RV G W+LF P+
Sbjct: 450 TYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMRRVMEKGTWTLFSPSNVPD 509
Query: 359 LADCWGAEFEKLYTHYEREG-----KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNR 413
L D +GA+FEK Y YE + K + +QA +LW ++LT ETG P++ FKD CN
Sbjct: 510 LHDLFGADFEKAYVAYEEKAARGDIKPARTIQATDLWRKMLTMLFETGHPWITFKDACNV 569
Query: 414 KSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSR 473
+S QQ+ G + SSNLCTEI TS TETAVCNL S+ L + +++ V
Sbjct: 570 RSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLQHLKDGKV------------- 616
Query: 474 GSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
D EKL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D
Sbjct: 617 -------DQEKLKRTISTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGLMGFQDALYE 669
Query: 534 LGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVI 593
L + + S EA Q + E I YHA S+E+A + G Y +Y S KGIL D +++
Sbjct: 670 LRIPYASQEAVQFADESMEAICYHAYWASTELARERGKYSSYKGSLWDKGILPIDSLDLL 729
Query: 594 PSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
R DW LR I +G+RNS VA PTA+ S I+G + EP N
Sbjct: 730 EKARGGYVEVDRSATLDWDTLRQKIKADGMRNSNCVAIAPTATISNIIGVDASIEPCFGN 789
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTV 702
+ + LSGEF V+N +L+ DL +G+W + + + DGS++ I +P+++K +Y T
Sbjct: 790 LSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFDGSLRPIDRVPQDVKALYATA 849
Query: 703 WEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRA 762
+E++ LV+ A R +IDQ+QSLNI+M + KK+ + W RGLKT YYLR+++
Sbjct: 850 FEVETTWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWVRGLKT-TYYLRTQS 908
Query: 763 AADAIKFTVDT 773
A A K TV +
Sbjct: 909 ATHAEKSTVQS 919
>gi|399018405|ref|ZP_10720584.1| ribonucleoside-diphosphate reductase, alpha subunit [Herbaspirillum
sp. CF444]
gi|398101521|gb|EJL91737.1| ribonucleoside-diphosphate reductase, alpha subunit [Herbaspirillum
sp. CF444]
Length = 989
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 301/800 (37%), Positives = 444/800 (55%), Gaps = 57/800 (7%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V DG+ + ++ + GL +H D + + +Y GV +L + A
Sbjct: 160 VVEDGQSRLLDLGEVRTLITAACVGLE-KHVDADAILAETVKNLYDGVPVEELHKSAILA 218
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y+ + AR+ +H K+ F + + D Y E + G++A L
Sbjct: 219 ARALMEKDPAYSQVTARLL---MHTIRKEVFGKEVAQADAPAEYLEYFAKYIKKGIEAEL 275
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ + + +K L I +RD + Y G +TL Y L +QG +E PQ MRV+
Sbjct: 276 LDSKLAQFDLKK---LAEAIKPERDLQFGYLGLQTLYDRYFLHIQGTRIEMPQAFYMRVA 332
Query: 176 IGIHKDDIDSAIKT---YHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID +T Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 333 MGLSLNEIDREARTIEFYNLLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVADD-LDGIY 391
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E +KE A+++K AGG+G +R+ G++I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 392 EAIKENALLAKYAGGLGNDWTPVRSLGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 450
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL+L+KN G + R D+ A W+PDLFM+RV G+W+LF
Sbjct: 451 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 510
Query: 353 PNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLF 407
P++A L D +G FE+ YT YE E K K VQA +LW ++L+ ETG P++ F
Sbjct: 511 PSDAPDLHDKFGKAFEEAYTGYEAKAARGELKLFKKVQALDLWRKMLSMLFETGHPWITF 570
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD CN +S QQ++G + SSNLCTEI T+ +E AVCNL S+ +P + ++
Sbjct: 571 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIAVCNLGSVNMPAHLVNGEI------- 623
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G
Sbjct: 624 -------------DHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGIMGF 670
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D + + + S +A + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 671 QDCLHMKRVPYASMDAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 730
Query: 588 DMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ +R DW LR IS+ G+RNS VA PTA+ S I+G + C
Sbjct: 731 DSLKLLAQERGGYLEADMSETLDWPALRSRISEFGMRNSNCVAIAPTATISNIIGVSACI 790
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF +N++L+ DL G+W + + + Y DGS+ KI IP++L+
Sbjct: 791 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMISDLKYFDGSLAKIDRIPQDLR 850
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
IY T +E++ LV+ A R +IDQ+QSLNI+M + K++ + W RGLKT Y
Sbjct: 851 DIYATAFEVEPSWLVEAASRRQKWIDQAQSLNIYMAGASGKRLDETYKLAWLRGLKT-TY 909
Query: 757 YLRSRAAADAIKFTVDTSVF 776
YLR+ A K T T
Sbjct: 910 YLRTIGATHTEKSTSKTGAL 929
>gi|398803255|ref|ZP_10562361.1| ribonucleoside-diphosphate reductase, alpha subunit [Polaromonas
sp. CF318]
gi|398097134|gb|EJL87446.1| ribonucleoside-diphosphate reductase, alpha subunit [Polaromonas
sp. CF318]
Length = 969
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 297/764 (38%), Positives = 434/764 (56%), Gaps = 58/764 (7%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP++ + +Y GV ++ + + A + PDY AR+ +H ++
Sbjct: 182 DPIVA--ETMRNLYDGVPIDEVYKASILAARTLIEKDPDYTYATARLL---MHTIRREVL 236
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYF 146
E + DM Y E G++ L+ + + + + A L + + +RD +DY
Sbjct: 237 GEEVTQADMAVRYAEYFPQFIAKGVQNELLDEKLQQF---DLARLGAALKPERDLKFDYL 293
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+ + +E PQ MRV++G+ ++ID AI+ Y ++S F ++P
Sbjct: 294 GLQTLFDRYFLHVRKQRIELPQAFFMRVAMGLSLNEIDREERAIEFYEILSSFDFMSSTP 353
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFNAGT R QLSSC+L + DD + GIY+ +KE A++SK AGG+G +RA G++I+
Sbjct: 354 TLFNAGTLRSQLSSCYLTTVADD-LGGIYDAIKENALLSKFAGGLGNDWTPVRALGAHIK 412
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 413 GTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 471
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ A W+PDLFM RV G W+LF P++ L D +G +FEK+YT YE E
Sbjct: 472 RTHDMNTANWIPDLFMRRVMEKGSWTLFSPSDTPDLHDKFGKDFEKIYTAYEAKAERGEI 531
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K + VQA ++W ++L+ ETG P++ FKD CN +S QQ+ G + SSNLCTEI TS
Sbjct: 532 KPSRKVQATDMWRKMLSMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSD 591
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
TETAVCNL S+ L + +++ V D EKL + L+
Sbjct: 592 TETAVCNLGSVNLVQHLKDGAV--------------------DHEKLKKTITTAMRMLDN 631
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY V+ AR SN+RHRP+G+G+ G D L + + S EA + E + YHA
Sbjct: 632 VIDINYYAVKKARDSNMRHRPVGLGIMGFQDCLYELRVPYASQEAVEFADKSMEAVCYHA 691
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMI 607
S+E+A + G Y +Y S KG+L D +++ R DW LR I
Sbjct: 692 YWASTELAKERGKYASYKGSLWDKGVLPLDTLDMLAEQRGGYVEIDRSATLDWEALRKKI 751
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+K+G+RNS VA PTA+ S I+G + C EP N+ + LSGEF V+N +L+ DL +
Sbjct: 752 AKDGMRNSNCVAIAPTATISNIIGVDACIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRL 811
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
+W + + + DGS++ I +P+++K +Y T +EI+ +V+ A R +IDQ+QSL
Sbjct: 812 NLWDDVMVVDLKHFDGSLRPIDRVPQDVKALYATAFEIETSWIVEAAARRQKWIDQAQSL 871
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + KK+ + W RGLKT YYLR+++A A K TV
Sbjct: 872 NIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTQSATHAEKSTV 914
>gi|384086263|ref|ZP_09997438.1| ribonucleoside-diphosphate reductase subunit alpha
[Acidithiobacillus thiooxidans ATCC 19377]
Length = 950
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 303/803 (37%), Positives = 445/803 (55%), Gaps = 51/803 (6%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
DG Q A+ ++ A +++ GL L+S +Y G++ +L + +
Sbjct: 144 DGTQRALDLKRLRAVIEEACSGLGEAVSVDTLMS-NTSKNLYDGISEDELFQAPILASRV 202
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNE------RSGLKAPLIADDI 120
M P YA ++AR+ + + + T +M Y E ++G+ LI +
Sbjct: 203 MIERDPAYAYVSARLLLDRVRWEVLGE-AATQAEMAARYPEYFRDYLQTGIAHELIDPRL 261
Query: 121 --YEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGI 178
Y++ AA I +RD ++ Y G + L Y L V+ + +E PQ MRV++G+
Sbjct: 262 GQYDLDRITAA-----IKPERDLNFQYLGLQILYDRYFLHVRERHIELPQSFWMRVAMGL 316
Query: 179 HKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETL 235
+++D AI Y ++S F ++PTLFN+GT RPQLSSCFL + DD ++ IYE +
Sbjct: 317 AVNEVDREEQAIAFYEVLSSFDFVSSTPTLFNSGTLRPQLSSCFLTTVGDD-LDDIYEAI 375
Query: 236 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
KE A++SK +GG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 376 KENALLSKFSGGLGNDWTPVRALGSFIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 434
Query: 296 AFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNE 355
A YLE WH DI EFL L+KN G + R D+ A W+PDLFMERV++ W+LF PNE
Sbjct: 435 AVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMERVESGTAWTLFSPNE 494
Query: 356 ASGLADCWGAEFEKLYTHYEREGKAKKV-----VQAQNLWFEILTSQIETGTPYMLFKDT 410
+ L D G+ F + Y HYER A ++ + A LW ++LT ETG P++ FKD
Sbjct: 495 TADLHDLTGSAFRERYEHYERMADAGEIELYKKIPALQLWRKMLTMLFETGHPWITFKDP 554
Query: 411 CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVR------EKDVPVES 464
CN +S QQ++G + SSNLCTEI T+ E AVCNL S+ L ++ + + +S
Sbjct: 555 CNLRSPQQHVGVVHSSNLCTEITLNTNDKEIAVCNLGSVNLIAHLKNTAGTDQSALRTDS 614
Query: 465 HPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
P ++ D +KL+ L+ +ID+NYY V AR SN+RHRP+G+G+
Sbjct: 615 TPEDLL-------ELLDTDKLSRTIRTAMRMLDNVIDMNYYAVAKARNSNMRHRPVGLGL 667
Query: 525 QGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGI 584
G +D + + + + SP A E I Y+A++ S+++A + G Y ++ S S+G+
Sbjct: 668 MGFSDALLEMRIPYASPAAVAFADISQEVISYYAIEASADLAQERGSYPSFQGSLWSQGV 727
Query: 585 LQPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNN 633
L D ++ + R DW LRD + K G+RNS +A PTA+ S I+G +
Sbjct: 728 LPIDSIELLAASREHGVDVDRSMRLDWNGLRDKVRK-GIRNSNCLAIAPTATISNIVGVS 786
Query: 634 ECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPE 693
+ EP N+Y + LSGEF VVN +L+HDL G+W + N + Y DGSV + IP
Sbjct: 787 QGIEPIYQNLYVKSNLSGEFTVVNSYLVHDLKRQGLWDEVMVNDLKYFDGSVLPVDRIPA 846
Query: 694 ELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKT 753
LK +Y +E LV+ A R ++DQ+QSLN++ QP+ KK+ + W RGLKT
Sbjct: 847 ALKPLYANAFETDPEWLVEAAARRQKWLDQAQSLNLYFGQPSGKKIDETYRLAWKRGLKT 906
Query: 754 GMYYLRSRAAADAIKFTVDTSVF 776
YYLRS A A K TV T
Sbjct: 907 -TYYLRSLGATAAEKSTVQTGTL 928
>gi|17547524|ref|NP_520926.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
solanacearum GMI1000]
gi|17429828|emb|CAD16512.1| putative ribonucleoside reductase 1 (large chain) oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 987
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 302/767 (39%), Positives = 430/767 (56%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
E DP + ++ +Y+GV SQ+ + A A + P Y+ ARI + + +
Sbjct: 180 ESVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ + D + + +R G+ A L+ D + + + K A LD+ RD ++
Sbjct: 240 GEEVTQAEMAGRYADYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + K +E PQ MRV++G+ ++ID AI+ Y ++S F +
Sbjct: 295 YLGLQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSS 354
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV G+W+LF P+ L D G FE Y YE
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEAAYLGYEDKVARG 532
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 533 EIKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L V++ D GS D +KL +
Sbjct: 593 NDSEIAVCNLGSVNLVAHVVKQAD-----------GSYA-----LDHDKLKKTVRTAMRM 636
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D +L + + + A Q E +
Sbjct: 637 LDNVIDINYYAVKKARDSNLRHRPVGLGIMGFQDALHVLRIPYATDAAVQFADTSMEAVC 696
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y TY S +G+L D ++ +R DW LR
Sbjct: 697 YYAYWASTELAEERGRYSTYKGSLWDRGVLPQDSLKLLAQERGGYLEADLSSTMDWDGLR 756
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
+ I ++G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 757 ERIQQHGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 816
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+
Sbjct: 817 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQA 876
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + K + + W RGLKT YYLR+ A K TV
Sbjct: 877 QSLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 922
>gi|145588392|ref|YP_001154989.1| ribonucleotide-diphosphate reductase subunit alpha
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145046798|gb|ABP33425.1| ribonucleoside-diphosphate reductase, alpha subunit
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 993
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 305/814 (37%), Positives = 447/814 (54%), Gaps = 59/814 (7%)
Query: 33 HCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNT-- 90
H D + + +Y GV +Q+ + A + + P ++ + ARI + + K
Sbjct: 201 HIDATPIITETIKNLYDGVPMAQVYDSAILASRTLIEKDPAFSQVTARILMHVIRKEILG 260
Query: 91 KKSFSETIKDMYNHYNER---SGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDYF 146
K+ ++ Y Y + G+ A L+ + E + + AA L++ RD ++Y
Sbjct: 261 KEVLQGDMQSEYGTYFAKYINEGISAELLDPRMREFDLPRLAAALNAS----RDLQFNYL 316
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L ++ + +E PQ MRV++G+ +++D AI+ Y ++S F ++P
Sbjct: 317 GLQTLYDRYFLHIEDRRIEMPQAFFMRVAMGLSLNELDRERRAIEFYEILSTFDFMSSTP 376
Query: 204 TLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIR 263
TLFN+ T RPQLSSC+L ++DD ++GIYE LKE A++SK AGG+G N+RA GS+I+
Sbjct: 377 TLFNSATTRPQLSSCYLTTVEDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIK 435
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 436 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 494
Query: 324 RARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EG 378
R D+ + W+PDLFM+RV NG W+LF P+ L D +G FE+ Y YE+ E
Sbjct: 495 RTHDMNTSNWIPDLFMKRVMENGDWTLFSPSNTPDLHDKYGKAFEEAYVAYEQKADRGEL 554
Query: 379 KAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSP 438
K + + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+
Sbjct: 555 KPFRRIPAQQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEITLNTNE 614
Query: 439 TETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
TE AVCNL S+ L +H + + + D EKL L+
Sbjct: 615 TEIAVCNLGSVNLT-----------AH----MTTDANGKLVLDHEKLQRTVRTAMRMLDN 659
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D + + + S EA + E + Y+A
Sbjct: 660 VIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHMQRIPYASEEAVKFADSSMEAVCYYA 719
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMI 607
+ S+E+A + G Y TY S +GIL D ++ +R DW LR I
Sbjct: 720 YQASNELAEERGVYSTYTGSLWDRGILPQDSVALLAQERGGYLEVDNSSTMDWSGLRARI 779
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ G+RNS VA PTA+ S I+G + C EP N++ + LSGEF VVN++L+ DL +
Sbjct: 780 KQYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLFVKSNLSGEFTVVNEYLVRDLKDR 839
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W + + Y DG++ KI IP++L+ +Y T +E++ LV+ A R +IDQ+QSL
Sbjct: 840 GLWDEVMIADLKYFDGTLSKIDRIPQDLRDLYATAFEVEPSWLVEAASRRQKWIDQAQSL 899
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVV 787
NI+M + KK+ + W RGLKT YYLR+ AA K TV + +
Sbjct: 900 NIYMGGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVASGQLNSVSSGGGVNG 958
Query: 788 DDETKMAQV--------VCSL----TNREECMAC 809
D T + VC++ EEC AC
Sbjct: 959 TDATAASAAGGVEADGPVCTMRPGDAGFEECEAC 992
>gi|239813963|ref|YP_002942873.1| ribonucleotide-diphosphate reductase subunit alpha [Variovorax
paradoxus S110]
gi|239800540|gb|ACS17607.1| ribonucleoside-diphosphate reductase, alpha subunit [Variovorax
paradoxus S110]
Length = 971
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 297/751 (39%), Positives = 424/751 (56%), Gaps = 50/751 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYNH 104
+Y GV ++ + + A + PDY AR+ + + K ++ Y
Sbjct: 195 LYDGVPLDEVYKASILAARTLIEKDPDYTFATARLLLHTIFKEIIGREVMPAERATAYAD 254
Query: 105 YNE---RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG 161
Y + G++ L+ + + + + L + + +RD +DY G +TL Y L V+
Sbjct: 255 YFPQFIKKGVENDLLDEKLLQYDLPR---LGAALKAERDNQFDYLGLQTLYDRYFLHVRK 311
Query: 162 KVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSC 218
+E PQ MRV++G+ +ID AI+ Y ++S F ++PTLFNAGT R QLSSC
Sbjct: 312 SRIELPQAFFMRVAMGLSLGEIDREARAIEFYEVLSSFDFMSSTPTLFNAGTLRSQLSSC 371
Query: 219 FLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
+L + DD ++GIYE++KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V
Sbjct: 372 YLTTVPDD-LDGIYESIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKV 430
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLF 338
NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PDLF
Sbjct: 431 VNDTAVAVNQGG-KRKGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLF 489
Query: 339 MERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEI 393
M RV G W+LF P+ L D +GA+FEK Y YE E K + +QA +LW ++
Sbjct: 490 MRRVMEKGTWTLFSPSNVPDLHDLFGADFEKAYVAYEEKAARGEIKPARTIQASDLWRKM 549
Query: 394 LTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPR 453
LT ETG P++ FKD CN +S QQ+ G + SSNLCTEI TS TETAVCNL S+ L +
Sbjct: 550 LTMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLQ 609
Query: 454 FVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRS 513
+++ V D EKL + L+ +ID+NYY V+ AR S
Sbjct: 610 HLKDGKV--------------------DQEKLKRTISTAMRMLDNVIDINYYAVKKARDS 649
Query: 514 NLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYE 573
NLRHRP+G+G+ G D L + + S EA Q + E I YHA S+E+A + G Y
Sbjct: 650 NLRHRPVGLGLMGFQDALYELRIPYASQEAVQFADESMEAICYHAYWASTELARERGKYS 709
Query: 574 TYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMP 622
+Y S KGIL D +++ R DW LR I +G+RNS VA P
Sbjct: 710 SYKGSLWDKGILPIDTLDLLEKARGGYVEVDRSATLDWEALRQKIKADGMRNSNCVAIAP 769
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ S I+G + EP N+ + LSGEF V+N +L+ DL +G+W + + + D
Sbjct: 770 TATISNIIGVDASIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFD 829
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GS++ I +P+++K +Y T +E++ LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 830 GSLRPIDRVPQDVKALYATAFEVETTWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDDT 889
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDT 773
+ W RGLKT YYLR+++A A K TV +
Sbjct: 890 YKLAWLRGLKT-TYYLRTQSATHAEKSTVQS 919
>gi|299065647|emb|CBJ36819.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum CMR15]
Length = 987
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 301/767 (39%), Positives = 430/767 (56%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
E DP + ++ +Y+GV SQ+ + A A + P Y+ ARI + + +
Sbjct: 180 ESVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ + D + + +R G+ A L+ D + + + K A LD+ RD ++
Sbjct: 240 GEEVTQAEMAGRYADYFPQFIKR-GINAGLLDDKLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + K +E PQ MRV++G+ ++ID A++ Y ++S F +
Sbjct: 295 YLGLQTLYDRYFLHISEKRIEMPQAFFMRVAMGLSLNEIDREARAVEFYQLLSSFDFMSS 354
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV G+W+LF P+ L D G FE Y YE
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGRAFEAAYLGYEEKVARG 532
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 533 EIKLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L V++ D GS D +KL +
Sbjct: 593 NDSEIAVCNLGSVNLVAHVVKQAD-----------GSYA-----LDHDKLKKTVRTAMRM 636
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D+ +L + + + A Q E +
Sbjct: 637 LDNVIDINYYAVKKARDSNLRHRPVGLGIMGFQDSLHVLRIPYATDAAVQFADTSMEAVC 696
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y TY S +G+L D ++ +R DW LR
Sbjct: 697 YYAYWASTELAEERGRYSTYKGSLWDRGVLPQDSLKLLAQERGGYLEADLSSTMDWDGLR 756
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I ++G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 757 ARIQQHGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 816
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+
Sbjct: 817 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQA 876
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + K + + W RGLKT YYLR+ A K TV
Sbjct: 877 QSLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 922
>gi|146308171|ref|YP_001188636.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
mendocina ymp]
gi|145576372|gb|ABP85904.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
mendocina ymp]
Length = 968
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 302/803 (37%), Positives = 449/803 (55%), Gaps = 62/803 (7%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
+ DG + + ++ +++ GL+ D L+ ++ +Y GV ++
Sbjct: 149 ITAADGSLQPLDMGRLQTIIREACEGLA--EVDGALIERETLKNLYDGVAEKDVNTALVM 206
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKN-------TKKSFSETIKDMYNH----YNERSGL 111
TA + P+Y+ + AR+ + N+ T+ + + D+Y Y ++ G+
Sbjct: 207 TARTLVEREPNYSYVTARLLMDNIRAEALTFLGITQSATHHEMVDLYAKALPAYVDK-GV 265
Query: 112 KAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHML 171
+ L+ + E ++ L + ++RD + Y G +TL Y + G E PQ
Sbjct: 266 EFELLDPKLKEYDLEK---LGKALNHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFF 322
Query: 172 MRVSIGIH----KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDS 227
MRV++G+ K+ D AI+ Y+++S + ++PTLFNAGT RPQLSSC+L + DD
Sbjct: 323 MRVAMGLAIEEPKNREDRAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDD- 381
Query: 228 IEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ GIY + + A++SK AGG+G +RA GSYI+GTNG S G+VP L+V NDTA V+
Sbjct: 382 LSGIYSAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVN 441
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQ 347
QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV +G+
Sbjct: 442 QGG-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGK 500
Query: 348 WSLFCPNEASGLADCWGAEFEKLYTHYE---REGKAK--KVVQAQNLWFEILTSQIETGT 402
W+LF P+E L D G FE+ Y +YE GK K K +QA++LW ++L+ ETG
Sbjct: 501 WTLFSPSEVPDLHDLTGKAFEERYEYYEALIEYGKIKLYKTIQAKDLWRKMLSMLFETGH 560
Query: 403 PYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPV 462
P++ FKD CN +S QQ++G + SSNLCTEI T+ E AVCNL S+ L
Sbjct: 561 PWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSVNLV---------- 610
Query: 463 ESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
+ IV + D EKL L+ +ID+NYY V AR SNL+HRP+G+
Sbjct: 611 ----NHIVDGK------LDIEKLGRTVKTAVRMLDNVIDINYYSVPQARNSNLKHRPVGL 660
Query: 523 GVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSK 582
G+ G D L +A+ S A + E I Y+A++ S ++A + G Y T+ S SK
Sbjct: 661 GLMGFQDALYLQHIAYGSDAAIEFADRSMEAISYYAIQASCDLAEERGAYSTFEGSLWSK 720
Query: 583 GILQPDMWNVI------------PSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQIL 630
GIL D ++ S+ DW LR+ + K G+RNS ++A PTA+ S I+
Sbjct: 721 GILPLDSQQILIEARGQKYIDVDLSESLDWAPLRERV-KKGIRNSNIMAIAPTATISNII 779
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPE 690
G ++ EP N+Y + LSGEF V+N +L+ DL G+W P + N + Y DGSVQ+I
Sbjct: 780 GVSQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKNRGLWDPVMVNDLKYYDGSVQQIER 839
Query: 691 IPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRG 750
IP++LK +Y T +E++ +VD A R +IDQ+QSLN+++ + KK+ + W RG
Sbjct: 840 IPQDLKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRG 899
Query: 751 LKTGMYYLRSRAAADAIKFTVDT 773
LKT YYLR+ AA K T++T
Sbjct: 900 LKT-TYYLRALAATSTEKSTINT 921
>gi|421890673|ref|ZP_16321528.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum K60-1]
gi|378964040|emb|CCF98276.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum K60-1]
Length = 987
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 303/764 (39%), Positives = 428/764 (56%), Gaps = 51/764 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN----- 89
DP + ++ +Y+GV SQ+ + A A + P Y+ ARI + + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 90 -TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDYFG 147
T+ + D + + +R G+ A L+ D + + + K A LD+ RD ++Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFNYLG 297
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L + K +E PQ MRV++G+ ++ID AI+ Y ++S F ++PT
Sbjct: 298 LQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSSTPT 357
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+I+G
Sbjct: 358 LFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 416
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGK 379
D+ A W+PDLFM+RV NG+W+LF P+ L D G FE+ Y YE E
Sbjct: 476 THDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEIT 535
Query: 380 AKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+ +
Sbjct: 536 LFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS 595
Query: 440 ETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNK 498
E AVCNL S+ L V++ D GS D +KL + L+
Sbjct: 596 EIAVCNLGSVNLVAHLVQQAD-----------GSYA-----LDHDKLKKTVRTAMRMLDN 639
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHA 558
+ID+NYY V+ AR SNLRHRP+G+GV G D +L + + + A Q E + Y+A
Sbjct: 640 VIDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANDAAVQFADTSMEAVCYYA 699
Query: 559 LKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMI 607
S+E+A + G Y TY S +GIL D ++ +R DW LR I
Sbjct: 700 YWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLETDLSSTMDWDSLRGRI 759
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 760 QQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKAR 819
Query: 668 GIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSL 727
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+QSL
Sbjct: 820 GLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSL 879
Query: 728 NIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + K + + W RGLKT YYLR+ A K TV
Sbjct: 880 NIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 922
>gi|323446056|gb|EGB02379.1| hypothetical protein AURANDRAFT_13764 [Aureococcus anophagefferens]
Length = 343
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/359 (67%), Positives = 282/359 (78%), Gaps = 16/359 (4%)
Query: 159 VQGKVVERPQHMLMRVSIGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSC 218
+ G + ERPQHM+MRV++GIH DD+ A++TY MMSQ+ FTHA+PTLFNAGTPRPQLSSC
Sbjct: 1 LDGAIAERPQHMIMRVALGIHGDDLAGALETYEMMSQKMFTHATPTLFNAGTPRPQLSSC 60
Query: 219 FLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FL+ MK+DSIEGIY+TLK CA ISK AGGIG+SVHNIRAT SYI G+NGTSNGIVPMLRV
Sbjct: 61 FLLAMKEDSIEGIYDTLKRCAAISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRV 120
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLF 338
+NDTARYVDQGGG+RKG+FA+YLEPWHADI +L+LKKNHG E RARDLFY LW+PDLF
Sbjct: 121 YNDTARYVDQGGGRRKGSFAIYLEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLF 180
Query: 339 MERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAKKVVQAQNLWFEILTSQI 398
M+RV+ NG WSL CPNE GLADC GAEFE LY YE EG+A+K + AQ LWF IL SQ+
Sbjct: 181 MKRVEANGFWSLMCPNECPGLADCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQV 240
Query: 399 ETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK 458
ETGTPYML+KD CN KSNQ++LGTIKSSNLCTEI+EYT+ E AVC LASI L V
Sbjct: 241 ETGTPYMLYKDACNDKSNQKHLGTIKSSNLCTEIVEYTASDEIAVCTLASINLTAHV--- 297
Query: 459 DVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRH 517
FDF KL +VT+NLNK++DVNYYPVE A+ SNL+H
Sbjct: 298 -------------DGAGDAATFDFAKLRRTAYVVTKNLNKVVDVNYYPVEEAKSSNLKH 343
>gi|386332372|ref|YP_006028541.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum Po82]
gi|334194820|gb|AEG68005.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum Po82]
Length = 987
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 302/767 (39%), Positives = 429/767 (55%), Gaps = 51/767 (6%)
Query: 32 EHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKN-- 89
+ DP + ++ +Y+GV SQ+ + A A + P Y+ ARI + + +
Sbjct: 180 DAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYD 144
T+ + D + + +R G+ A L+ D + + + K A LD+ RD ++
Sbjct: 240 GEEVTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + K +E PQ MRV++G+ ++ID A++ Y ++S F +
Sbjct: 295 YLGLQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAVEFYQLLSSFDFMSS 354
Query: 202 SPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 EHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER----- 376
R D+ A W+PDLFM+RV NG+W+LF P+ L D G FE+ Y YE
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARG 532
Query: 377 EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYT 436
E K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T
Sbjct: 533 EITLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPTETAVCNLASIAL-PRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTEN 495
+ +E AVCNL S+ L V++ D GS D +KL +
Sbjct: 593 NDSEIAVCNLGSVNLVAHLVQQAD-----------GSYA-----LDHDKLKKTVRTAMRM 636
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIY 555
L+ +ID+NYY V+ AR SNLRHRP+G+GV G D +L + + + A Q E +
Sbjct: 637 LDNVIDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANEAAVQFADTSMEAVC 696
Query: 556 YHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLR 604
Y+A S+E+A + G Y TY S +GIL D ++ +R DW LR
Sbjct: 697 YYAYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSTMDWDSLR 756
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 757 GRIQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDL 816
Query: 665 TEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQS 724
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+
Sbjct: 817 KARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQA 876
Query: 725 QSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
QSLNI+M + K + + W RGLKT YYLR+ A K TV
Sbjct: 877 QSLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTV 922
>gi|300309721|ref|YP_003773813.1| ribonucleoside reductase large subunit [Herbaspirillum seropedicae
SmR1]
gi|300072506|gb|ADJ61905.1| ribonucleoside reductase (large chain) oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 994
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 303/795 (38%), Positives = 441/795 (55%), Gaps = 59/795 (7%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V DG+ + +++ + + GL EH D + + +Y GV +L + A
Sbjct: 158 VTEDGQSRPLDINEVRSLIAAACVGLE-EHVDGEAILAETVKNLYDGVPVEELYKSAILA 216
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y+ + +R+ +H K+ F + + D Y E + G++A L
Sbjct: 217 ARALMEKDPAYSQVTSRLL---MHTIRKEVFGKEVAQADAPAEYLEYFPQYVKKGIEAEL 273
Query: 116 IADDIYEI-IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
+ + + + K AA L E RD + Y G +TL Y L + G +E PQ MRV
Sbjct: 274 LDTKLAQFDLAKLAAALKPE----RDLQFGYIGLQTLYDRYFLHIGGTRIEMPQAFYMRV 329
Query: 175 SIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGI 231
++G+ ++ID AI+ Y ++S F ++PTLFN+GT R QLSSC+L + DD ++GI
Sbjct: 330 AMGLALNEIDRETRAIEFYDLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LDGI 388
Query: 232 YETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGG 291
YE +KE A+++K AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG
Sbjct: 389 YEAIKENALLAKFAGGLGNDWTPVRALGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG- 447
Query: 292 KRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLF 351
KRKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV G+W+LF
Sbjct: 448 KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLF 507
Query: 352 CPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYML 406
P++ L D +G FE+ YT YE E K K VQA +LW ++L+ ETG P++
Sbjct: 508 SPSDTPDLHDKFGRAFEEAYTAYEAKAARGELKLFKKVQANDLWRKMLSMLFETGHPWIT 567
Query: 407 FKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHP 466
FKD CN +S QQ++G + SSNLCTEI T+ +E AVCNL S+ LP +
Sbjct: 568 FKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNLPAHL----------- 616
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
N D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G
Sbjct: 617 ---------VNGELDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGMGIMG 667
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D + + + S +A + E + Y+A S+E+A + G Y +Y S +GIL
Sbjct: 668 FQDCLHIKRVPYASMDAVEFADRSMEAVCYYAYMASTELAEERGRYASYRGSLWDRGILP 727
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D ++ +R DW LR I+++G+RNS VA PTA+ S I+G + C
Sbjct: 728 QDSLKLLAQERGGYLETDSTETLDWAALRARIAEHGMRNSNCVAIAPTATISNIIGVSAC 787
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N+Y + LSGEF +N++L+ DL G+W + + Y DGS+ KI IP++L
Sbjct: 788 IEPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMVADLKYFDGSLAKIDRIPQDL 847
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ IY T +E+ LV+ A R +IDQ+QSLNI+M + K++ + W RGLKT
Sbjct: 848 RDIYATAFEVDPSWLVEAASRRQKWIDQAQSLNIYMAGASGKRLDETYKLAWLRGLKT-T 906
Query: 756 YYLRSRAAADAIKFT 770
YYLR+ A K T
Sbjct: 907 YYLRTIGATHTEKST 921
>gi|319791702|ref|YP_004153342.1| ribonucleoside-diphosphate reductase subunit alpha [Variovorax
paradoxus EPS]
gi|315594165|gb|ADU35231.1| ribonucleoside-diphosphate reductase, alpha subunit [Variovorax
paradoxus EPS]
Length = 971
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 297/751 (39%), Positives = 424/751 (56%), Gaps = 50/751 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNT--KKSFSETIKDMYNH 104
+Y GV ++ + + A + PDY AR+ + + K ++ Y
Sbjct: 195 LYDGVPLDEVYKASILAARTLIEKDPDYTFATARLLLHTIFKEIIGREVMPVDRATAYAD 254
Query: 105 YNE---RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG 161
Y + G++ L+ + + + + L + + +RD +DY G +TL Y L V+
Sbjct: 255 YFPQFIKKGVENDLLDEKLLQYDLPR---LGAALKAERDNQFDYLGLQTLYDRYFLHVRK 311
Query: 162 KVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSC 218
+E PQ MRV++G+ +ID AI+ Y ++S F ++PTLFNAGT R QLSSC
Sbjct: 312 TRIELPQAFFMRVAMGLSLGEIDREARAIEFYEVLSSFDFMSSTPTLFNAGTLRSQLSSC 371
Query: 219 FLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
+L + DD ++GIYE++KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V
Sbjct: 372 YLTTVPDD-LDGIYESIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKV 430
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLF 338
NDTA V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A W+PDLF
Sbjct: 431 VNDTAVAVNQGG-KRKGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLF 489
Query: 339 MERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEI 393
M RV G W+LF P+ L D +GA+FEK Y YE E K + +QA +LW ++
Sbjct: 490 MRRVMEKGTWTLFSPSNVPDLHDLFGADFEKAYVAYEEKAARGEIKPARTIQASDLWRKM 549
Query: 394 LTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPR 453
LT ETG P++ FKD CN +S QQ+ G + SSNLCTEI TS TETAVCNL S+ L +
Sbjct: 550 LTMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLQ 609
Query: 454 FVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRS 513
+++ V D EKL + L+ +ID+NYY V+ AR S
Sbjct: 610 HLKDGKV--------------------DQEKLKRTISTAMRMLDNVIDINYYAVKKARDS 649
Query: 514 NLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYE 573
NLRHRP+G+G+ G D L + + S EA Q + E I YHA S+E+A + G Y
Sbjct: 650 NLRHRPVGLGLMGFQDALYELRIPYASQEAVQFADESMEAICYHAYWASTELAKERGKYS 709
Query: 574 TYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMP 622
+Y S KGIL D +++ R DW LR I +G+RNS VA P
Sbjct: 710 SYKGSLWDKGILPIDTLDLLEQARGGYVEVDRSATLDWDALRAKIKADGMRNSNCVAIAP 769
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDD 682
TA+ S I+G + EP N+ + LSGEF V+N +L+ DL +G+W + + + D
Sbjct: 770 TATISNIIGVDASIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFD 829
Query: 683 GSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSL 742
GS++ I +P+++K +Y T +E++ LV+ A R +IDQ+QSLNI+M + KK+
Sbjct: 830 GSLRPIDRVPQDVKALYATAFEVETTWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDDT 889
Query: 743 HFRTWSRGLKTGMYYLRSRAAADAIKFTVDT 773
+ W RGLKT YYLR+++A A K TV +
Sbjct: 890 YKLAWLRGLKT-TYYLRTQSATHAEKSTVQS 919
>gi|33598410|ref|NP_886053.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
parapertussis 12822]
gi|33603350|ref|NP_890910.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
bronchiseptica RB50]
gi|410474442|ref|YP_006897723.1| ribonucleoside-diphosphate reductase subunit alpha [Bordetella
parapertussis Bpp5]
gi|427816360|ref|ZP_18983424.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica 1289]
gi|33574539|emb|CAE39186.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
parapertussis]
gi|33577474|emb|CAE34739.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica RB50]
gi|408444552|emb|CCJ51310.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
parapertussis Bpp5]
gi|410567360|emb|CCN24931.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica 1289]
Length = 975
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 304/792 (38%), Positives = 441/792 (55%), Gaps = 54/792 (6%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
+G + + + A ++ GL T++ D + ++ +Y GV ++ + A A A
Sbjct: 158 NGVRRPLDLAALRATIEAAGEGL-TQYTDTEAILKETVKNLYDGVPVDEVFKSAILAARA 216
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIAD 118
+ P Y+ + AR+ LH K+ E + DM Y E + G++ L+
Sbjct: 217 LVEKDPAYSQVTARLL---LHTIRKEVLGEEVSQADMATRYAEYFPAFIQRGIEGGLLDA 273
Query: 119 DIYEIIMKNAA-CLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIG 177
+ E ++ A LD RD + Y G +TL Y L V+G +E PQ MRV++G
Sbjct: 274 KLAEYDLERVAKALDGR----RDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 329
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + D AI+ Y ++S F ++PTLFN+GT QLSSC+L + DD +EGIY+
Sbjct: 330 LALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 388
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A+++K AGG+G +RA S+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA YLE WH DI EFL L+KN G E R D+ A W+PDLFM+RV NG+W+LF P+
Sbjct: 448 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPS 507
Query: 355 EASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
+ L D +G FE+ Y YE E K K + A +LW ++L+ ETG P++ FKD
Sbjct: 508 DCPDLHDKYGKAFEQAYAGYEAKVASGELKLFKKMPAVSLWRKMLSMLFETGHPWITFKD 567
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ TE AVCNL S+ L ++ PS
Sbjct: 568 PCNIRSPQQHVGVVHSSNLCTEITLNTNATEIAVCNLGSVNLVAHMK---------PSAN 618
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
G D +KL + L+ +ID+NYY V+ AR SN RHRP+G+G+ G D
Sbjct: 619 GGYE------LDHDKLKRTIGVAMRMLDNVIDINYYAVDKARNSNERHRPVGMGIMGFQD 672
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
++ + + S +A E + YHA SSE+A + G Y++Y S S+GIL D
Sbjct: 673 CLHVMRVPYASQDAIDFADRSMEAVCYHAYWASSELAQERGRYQSYEGSLWSRGILPQDT 732
Query: 590 WNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
++ +R DW LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 733 LAMLREERGGNVDVDDSSSLDWDTLRSRIKEHGMRNSNCIAIAPTATISNIIGVSACIEP 792
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
N+Y + LSGEF VVN +L+ DL ++G+W + + Y DGS+ +I +P EL+ +
Sbjct: 793 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPSELRKL 852
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
Y T +E++ LV+ A R +IDQ+QSLNI+M + KK+ + W RGLKT YYL
Sbjct: 853 YATAFEVEPSWLVECASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWQRGLKT-TYYL 911
Query: 759 RSRAAADAIKFT 770
R+ A A K T
Sbjct: 912 RTLGATSAEKST 923
>gi|330504345|ref|YP_004381214.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
mendocina NK-01]
gi|328918631|gb|AEB59462.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
mendocina NK-01]
Length = 968
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 298/794 (37%), Positives = 440/794 (55%), Gaps = 54/794 (6%)
Query: 8 GRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAM 67
G + + ++ +++ GL+ D L+ ++ +Y GV ++ TA +
Sbjct: 154 GEVQPLDMGRLQTIIREACEGLA--EVDGSLIERETLKNLYDGVAEKDVNTALVMTARTL 211
Query: 68 TTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDIYEIIMKN 127
P+Y+ + AR+ + N+ S ++ + P + E + +
Sbjct: 212 VEREPNYSYVTARLLMDNIRAEALSFLSIAASATHHEMADLYAKALPAYVEKGVEFELLD 271
Query: 128 AAC-------LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIH- 179
A L + I ++RD + Y G +TL Y + G E PQ MRV++G+
Sbjct: 272 AKLKTFDLEKLGAAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAI 331
Query: 180 ---KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLK 236
K+ D AI+ Y+++S + ++PTLFNAGT RPQLSSC+L + DD + GIY +
Sbjct: 332 EEPKNREDRAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDD-LSGIYGAIH 390
Query: 237 ECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
+ A++SK AGG+G +RA GSYI+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 391 DNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGA 449
Query: 297 FAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEA 356
YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV +G+W+LF P+E
Sbjct: 450 VCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGKWTLFSPSEV 509
Query: 357 SGLADCWGAEFEKLYTHYE---REGKAK--KVVQAQNLWFEILTSQIETGTPYMLFKDTC 411
L D G FE+ Y +YE GK K K +QA++LW ++L+ ETG P++ FKD C
Sbjct: 510 PDLHDLTGKAFEERYEYYEALIEYGKIKLYKTIQAKDLWRKMLSMLFETGHPWLTFKDPC 569
Query: 412 NRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVG 471
N +S QQ++G + SSNLCTEI T+ E AVCNL S+ L + IV
Sbjct: 570 NLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSVNLV--------------NHIVD 615
Query: 472 SRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
+ D EKL L+ +ID+NYY V+ AR SNL+HRP+G+G+ G D
Sbjct: 616 GK------LDIEKLGRTVKTAVRMLDNVIDINYYSVDQARNSNLKHRPVGLGLMGFQDAL 669
Query: 532 ILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN 591
L +A+ S A + E I Y+A++ S ++A + G Y T+ S SKGIL D
Sbjct: 670 YLQHIAYGSDAAIEFADKSMEAISYYAIQASCDLADERGSYSTFEGSLWSKGILPLDSQQ 729
Query: 592 VI------------PSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
++ S+ DW +R+ + K G+RNS ++A PTA+ S I+G ++ EP
Sbjct: 730 LLIEARGQKYIDVDLSESLDWAPIRERV-KKGIRNSNIMAIAPTATISNIIGVSQSIEPT 788
Query: 640 TSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIY 699
N+Y + LSGEF V+N +L+ DL G+W P + N + Y DGSVQ+I IP++LK +Y
Sbjct: 789 YQNLYVKSNLSGEFTVINPYLVRDLKNRGLWDPVMVNDLKYYDGSVQQIERIPQDLKDLY 848
Query: 700 KTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLR 759
T +E++ +VD A R +IDQ+QSLN+++ + KK+ + W RGLKT YYLR
Sbjct: 849 ATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TYYLR 907
Query: 760 SRAAADAIKFTVDT 773
+ AA K T++T
Sbjct: 908 ALAATSTEKSTINT 921
>gi|262376781|ref|ZP_06070009.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
lwoffii SH145]
gi|262308491|gb|EEY89626.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
lwoffii SH145]
Length = 945
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 317/868 (36%), Positives = 450/868 (51%), Gaps = 104/868 (11%)
Query: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
+ + +G+ + + +TA + K + GL E D + + +Y GV S +
Sbjct: 122 LQITDAEGKLKPLDLSALTAHVTKAAEGL--EGIDVQAIVDETVKNLYNGVKESDISTTM 179
Query: 61 AETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDI 120
P+Y + AR+ +L K GL + D
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDDLVATGLKFL---------------GLPVDTVEGDA 224
Query: 121 YEIIMKNA---------------ACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
E +K A L + I +R + Y G +TL Y + G E
Sbjct: 225 LETYLKKGIELELLSPELLNFDLAKLAAAIQPERSNQFTYLGLQTLFDRYFIHSDGVRFE 284
Query: 166 RPQHMLMRVSIGI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVC 222
PQ MRVS+G+ ++ D AI+ Y+++S + ++PTLFN+GT RPQLSSC+L
Sbjct: 285 LPQLFFMRVSMGLSLNEENREDRAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTT 344
Query: 223 MKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDT 282
+ DD + IY +++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDT
Sbjct: 345 I-DDDLYDIYGAMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDT 403
Query: 283 ARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERV 342
A V+QGG KRKGA YLE WH DI EFL L+KN G + R D+ A WVPDLFM+RV
Sbjct: 404 AVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRV 462
Query: 343 QTNGQWSLFCPNEASGLADCWGAEFEKLYTHYEREGKAK----KVVQAQNLWFEILTSQI 398
+ +W+LF P+E L D GAEF + Y HYE K K ++A++LW ++L+
Sbjct: 463 FEDAEWTLFTPSETPDLHDLTGAEFAERYAHYEAIAKETNMLHKKIRAKDLWRKMLSMLF 522
Query: 399 ETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREK 458
ETG P++ FKD CN +S QQ++G + SSNLCTEI TS E AVCNL SI L + V
Sbjct: 523 ETGHPWITFKDVCNLRSPQQHVGVVHSSNLCTEITLNTSKEEIAVCNLGSINLVQHV--- 579
Query: 459 DVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHR 518
+ D EKLA L+ +ID+NYY V AR SNL+HR
Sbjct: 580 -----------------QGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQARNSNLKHR 622
Query: 519 PIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNS 578
P+G+G+ G D + +A+ S A + + E I Y+A+ TSS++A + G YET+ S
Sbjct: 623 PVGMGIMGFQDALYEMNVAYGSDAAVEFADESMEVISYYAISTSSDLAVERGTYETFKGS 682
Query: 579 PVSKGILQPD------------MWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTAST 626
+GIL D M+ V + R DW LR + K+G+RNS ++A PTA+
Sbjct: 683 LWDQGILPIDSLDLVAKTRPERMFEVDRTQRLDWDTLRAKVQKDGMRNSNVMAIAPTATI 742
Query: 627 SQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQ 686
S I G ++ EP N+Y + LSGEF V+N +L+ L E G+W + N + + +GSVQ
Sbjct: 743 SNICGVSQSIEPTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDAVMVNDLKHFEGSVQ 802
Query: 687 KIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRT 746
KI IPEELK I+ T +E++ +VD A R +IDQ+QSLN+++ N KK+ +
Sbjct: 803 KISRIPEELKAIFATAFEVETRWIVDAASRRQKWIDQAQSLNLYIAGANGKKLDITYKMA 862
Query: 747 WSRGLKTGMYYLRSRAAADAIKFTVDTSVFK--------------------EKPEKPELV 786
W RGLKT YYLR+ A A K T++T +KPE P
Sbjct: 863 WLRGLKT-TYYLRALGATSAEKSTINTGALNAVKPATVAAPVVAAAPVVEAQKPEAPA-- 919
Query: 787 VDDETKMAQ-----VVCSLTNREECMAC 809
+E AQ + CS+ N +C AC
Sbjct: 920 --EEEGFAQAAPVPMACSIDN-PDCEAC 944
>gi|412341327|ref|YP_006970082.1| ribonucleoside-diphosphate reductase subunit alpha [Bordetella
bronchiseptica 253]
gi|408771161|emb|CCJ55960.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica 253]
Length = 975
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 304/792 (38%), Positives = 440/792 (55%), Gaps = 54/792 (6%)
Query: 7 DGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAA 66
+G + + + A ++ GL T++ D + ++ +Y GV ++ + A A A
Sbjct: 158 NGVRRPLDLAALRATIEAAGEGL-TQYTDTEAILKETVKNLYDGVPVDEVFKSAILAARA 216
Query: 67 MTTNHPDYASLAARIAVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIAD 118
+ P Y+ + AR+ LH K+ E + DM Y E + G++ L+
Sbjct: 217 LVEKDPAYSQVTARLL---LHTIRKEVLGEEVSQADMATRYAEYFPAFIQRGIEGGLLDA 273
Query: 119 DIYEIIMKNAA-CLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIG 177
+ E ++ A LD RD + Y G +TL Y L V+G +E PQ MRV++G
Sbjct: 274 KLAEYDLERVAKALDGR----RDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 329
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYET 234
+ + D AI+ Y ++S F ++PTLFN+GT QLSSC+L + DD +EGIY+
Sbjct: 330 LALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 388
Query: 235 LKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A+++K AGG+G +RA S+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPN 354
GA YLE WH DI EFL L+KN G E R D+ A W+PDLFM+RV NG+W+LF P+
Sbjct: 448 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPS 507
Query: 355 EASGLADCWGAEFEKLYTHYER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKD 409
+ L D +G FE+ Y YE E K K A +LW ++L+ ETG P++ FKD
Sbjct: 508 DCPDLHDKYGKAFEQAYAGYEAKVASGELKLFKKTPAVSLWRKMLSMLFETGHPWITFKD 567
Query: 410 TCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRI 469
CN +S QQ++G + SSNLCTEI T+ TE AVCNL S+ L ++ PS
Sbjct: 568 PCNIRSPQQHVGVVHSSNLCTEITLNTNATEIAVCNLGSVNLVAHMK---------PSAN 618
Query: 470 VGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
G D +KL + L+ +ID+NYY V+ AR SN RHRP+G+G+ G D
Sbjct: 619 GGYE------LDHDKLKRTIGVAMRMLDNVIDINYYAVDKARNSNERHRPVGMGIMGFQD 672
Query: 530 TFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDM 589
++ + + S +A E + YHA SSE+A + G Y++Y S S+GIL D
Sbjct: 673 CLHVMRVPYASQDAIDFADRSMEAVCYHAYWASSELAQERGRYQSYEGSLWSRGILPQDT 732
Query: 590 WNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
++ +R DW LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 733 LAMLREERGGNVDVDDSSSLDWDTLRSRIKEHGMRNSNCIAIAPTATISNIIGVSACIEP 792
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMI 698
N+Y + LSGEF VVN +L+ DL ++G+W + + Y DGS+ +I +P EL+ +
Sbjct: 793 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPSELRKL 852
Query: 699 YKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYL 758
Y T +E++ LV+ A R +IDQ+QSLNI+M + KK+ + W RGLKT YYL
Sbjct: 853 YATAFEVEPSWLVECASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWQRGLKT-TYYL 911
Query: 759 RSRAAADAIKFT 770
R+ A A K T
Sbjct: 912 RTLGATSAEKST 923
>gi|340789060|ref|YP_004754525.1| ribonucleotide reductase of class Ia (aerobic) subunit alpha
[Collimonas fungivorans Ter331]
gi|340554327|gb|AEK63702.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Collimonas fungivorans Ter331]
Length = 974
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 298/800 (37%), Positives = 447/800 (55%), Gaps = 57/800 (7%)
Query: 4 VKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAET 63
V DG++ + +++ + + GL +H D + + +Y GV +L + A
Sbjct: 155 VTEDGQRRVLDMEQVRSLITAACIGLE-KHVDAEAILAETVKNLYDGVPVEELHKSAILA 213
Query: 64 AAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y+++ AR+ +H K+ F + + D Y E + G++A L
Sbjct: 214 ARALMEKDPAYSTVTARLL---MHTIRKEVFGKEVAQADAPEAYLEYFPKFIKKGIEADL 270
Query: 116 IADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVS 175
+ + + +K L + +RD + Y G +TL Y L V+ +E PQ MRV+
Sbjct: 271 LDAKLAQFDLK---ALGEALKPERDLQFGYLGLQTLYDRYFLHVREIRIEMPQAFYMRVA 327
Query: 176 IGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIY 232
+G+ ++++ AI+ Y+++S F ++PTLFN+GT R QLSSC+L + DD ++GIY
Sbjct: 328 MGLALNEVNREARAIEFYNLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LDGIY 386
Query: 233 ETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
E +KE A+++K AGG+G +R+ G++I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 387 EAIKENALLAKYAGGLGNDWTPVRSLGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 445
Query: 293 RKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFC 352
RKGA YLE WH DI EFL+L+KN G + R D+ A W+PDLFM+RV G+W+LF
Sbjct: 446 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 505
Query: 353 PNEASGLADCWGAEFEKLYTHYE-REGKAK----KVVQAQNLWFEILTSQIETGTPYMLF 407
P++A L D G FE+ YT YE R + K +QA +LW ++L+ ETG P++ F
Sbjct: 506 PSDAPDLHDKVGKAFEEAYTGYEARAARGDLRLFKKIQALDLWRKMLSMLFETGHPWITF 565
Query: 408 KDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPS 467
KD CN +S QQ++G + SSNLCTEI T+ +E AVCNL S+ LP +++ +
Sbjct: 566 KDPCNIRSPQQHVGMVHSSNLCTEITLNTNESEIAVCNLGSVNLPAHMKDGQL------- 618
Query: 468 RIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G
Sbjct: 619 -------------DHAKLQKTINTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGIMGF 665
Query: 528 ADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQP 587
D ++ + + S A + E + YHA S+E+A + G Y +Y S +GIL
Sbjct: 666 QDCLHMMRVPYASQAAVEFADKSMEAVCYHAYWASTELAEERGRYSSYRGSLWDRGILPQ 725
Query: 588 DMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ +R DW LR I + G+RNS VA PTA+ S I+G + C
Sbjct: 726 DSLKLLAEERGGYLEADMSASLDWTELRGRIKEFGMRNSNCVAIAPTATISNIIGVSACI 785
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELK 696
EP N+Y + LSGEF +N++L+ DL G+W + + + Y DGS+ KI IP++L+
Sbjct: 786 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMISDLKYFDGSLAKIDRIPQDLR 845
Query: 697 MIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMY 756
IY T +E++ LV+ A R +IDQ+QSLNI+M + KK+ + W RGLKT Y
Sbjct: 846 DIYATAFEVEPSWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TY 904
Query: 757 YLRSRAAADAIKFTVDTSVF 776
YLR+ A K T T
Sbjct: 905 YLRTIGATHTEKSTSKTGAL 924
>gi|332286775|ref|YP_004418686.1| ribonucleotide-diphosphate reductase subunit alpha [Pusillimonas
sp. T7-7]
gi|330430728|gb|AEC22062.1| ribonucleotide-diphosphate reductase subunit alpha [Pusillimonas
sp. T7-7]
Length = 973
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 301/772 (38%), Positives = 439/772 (56%), Gaps = 54/772 (6%)
Query: 28 GLSTEH-CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNL 86
GL+ H D + ++ +Y G+ ++ + A +A AM N P Y+ + AR+ L
Sbjct: 173 GLNLPHNIDAEAILKETVKNIYDGIPVDEVFKSAILSARAMVENDPSYSQVTARLL---L 229
Query: 87 HKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIADDIYEI-IMKNAACLDSEIIY 137
H K+ E + DM Y E ++G++ L+ + + + + K AA L +E
Sbjct: 230 HTIRKEVLGEEVSQSDMATRYAEYFPQFLKAGIEGGLLDEKLAQFDLPKLAAALKAE--- 286
Query: 138 DRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDI---DSAIKTYHMMS 194
RD ++Y G +TL Y L ++G+ +E PQ MRV++G+ ++I + AI+ Y ++S
Sbjct: 287 -RDLQFNYLGLQTLYDRYFLHLRGRRIELPQVFFMRVAMGLALNEINREERAIEFYEILS 345
Query: 195 QRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHN 254
F ++PTLFN+GT QLSSC+L + DD + GIY+ +KE A+++K AGG+G
Sbjct: 346 SFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LAGIYDAIKENALLAKYAGGLGNDWTP 404
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNL 314
+RA S+I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L
Sbjct: 405 VRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLEL 463
Query: 315 KKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHY 374
+KN G E R D+ A W+PDLFM+RV NG+W+LF P++A L D +G +FE+ Y Y
Sbjct: 464 RKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSDAPDLHDKYGKDFEEAYLGY 523
Query: 375 ER-----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLC 429
E E K V A LW ++L+ ETG P++ FKD CN +S QQ++G + SSNLC
Sbjct: 524 EDKVARGELPLFKKVPANMLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLC 583
Query: 430 TEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVT 489
TEI T+ +E AVCNL S+ L +++ + D EKL
Sbjct: 584 TEITLNTNDSEIAVCNLGSVNLAAHLKQD---------------ANGQYVLDHEKLERTI 628
Query: 490 AIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKD 549
I L+ +ID+NYY V AR SN+RHRP+G+GV G D ++ + F S +A + +
Sbjct: 629 GIAMRMLDNVIDINYYAVPKARNSNVRHRPVGMGVMGFQDCLHMMRVPFASDDAVEFSDR 688
Query: 550 IFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------W 598
E Y+A SS++AA+ G Y ++ S +GIL D ++ +R
Sbjct: 689 SMEAACYYAYWASSKLAAERGHYASFKGSLWDRGILPQDTLALLREERGGYVEVDDSSTL 748
Query: 599 DWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW LR I ++G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN
Sbjct: 749 DWDSLRAHIKQHGMRNSNCVAIAPTATISNIIGVSPCIEPNYRNLYVKSNLSGEFTVVND 808
Query: 659 HLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRG 718
+L+ DL E +W + + + Y DGS+ +I IP +L+ +Y T +E+ +V+ A R
Sbjct: 809 YLVRDLKERKLWDEVMVSDLKYFDGSLARIDRIPADLRKLYATAFEVDPTWVVECAARRS 868
Query: 719 CYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFT 770
+IDQ+QSLNI M + KK+ ++ W RGLKT YYLRS A +A K T
Sbjct: 869 KWIDQAQSLNIFMAGVSGKKLDDIYKLAWVRGLKT-TYYLRSIGATNAEKST 919
>gi|72163400|ref|YP_291057.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
gi|71917132|gb|AAZ57034.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
Length = 821
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 294/763 (38%), Positives = 428/763 (56%), Gaps = 56/763 (7%)
Query: 39 VSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFS--- 95
V + G Y G+T ++L+ A PDY+ ++AR+ + L + S
Sbjct: 23 VIAEATRGFYPGITPAELELALIMAARTFVETDPDYSYVSARLLLDKLRREALTFLSGHP 82
Query: 96 --ETIKDMYNHYNE------RSGLKAPLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFG 147
T DM Y E G++ + ++ + + L + + +RD ++ Y G
Sbjct: 83 DEATHADMARRYPEYLRAFITRGIELEHLTPELADFDLDR---LGAALRPERDLNFTYLG 139
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVSIGI--HKDDIDS-AIKTYHMMSQRWFTHASPT 204
+TL Y L +G E PQ LMRV++G+ H+DD ++ AI+ Y ++S F ++PT
Sbjct: 140 LQTLYDRYFLHHEGTRYELPQAFLMRVAMGVALHEDDRNARAIEFYELLSSFDFMCSTPT 199
Query: 205 LFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRG 264
LFNAGT RPQLSSCFL + DD E I+ + A++SK +GG+G +R G++I+G
Sbjct: 200 LFNAGTRRPQLSSCFLTTVGDDLAE-IFRAISNNALLSKYSGGLGNDWTPVRGLGAHIKG 258
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHR 324
TNG S G+VP L++ NDTA V+QGG KRKGA YLE WH DI EFL+L+KN G E R
Sbjct: 259 TNGKSQGVVPFLKIANDTAVAVNQGG-KRKGAVCAYLETWHIDIEEFLDLRKNTGDERRR 317
Query: 325 ARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----EGK 379
D+ A WVPDLF+ERV+++ QW+LF P+E L D +G +F + Y YER E +
Sbjct: 318 THDMNTANWVPDLFLERVESDAQWTLFSPDEVPDLHDRYGEDFARAYVAYERAADRGEIR 377
Query: 380 AKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPT 439
+ V+A +LW +LT ETG P++ FKD CN +S QQ+ G + SSNLCTEI TS
Sbjct: 378 VFRRVRAVDLWRRMLTMLFETGHPWITFKDPCNLRSPQQHAGVVHSSNLCTEITLNTSLD 437
Query: 440 ETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKI 499
E AVCNL S+ L + VG G D E+L L+ +
Sbjct: 438 EVAVCNLGSVNL---------------ANHVGPDG-----LDAERLRRTVRTAVRMLDNV 477
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHAL 559
IDVN Y + A R+N+RHRPIG+G+ G D L + SPEA + + E + Y+A+
Sbjct: 478 IDVNLYTIPEAERANMRHRPIGLGLMGYQDALFTLRLPVASPEAVEFADESMELLSYYAI 537
Query: 560 KTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP-----------SDRWDWGVLRDMIS 608
+ S+++AA+ G Y ++ S S+GIL D ++ + R DW LR+ +
Sbjct: 538 EASADLAAERGSYSSFEGSLWSRGILPIDSLELLAEARRGDLDVDRTQRLDWDTLREKVR 597
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
G+RNS ++A PTA+ + I+G N EP N+Y + +SG+F VVN L+ DL E G
Sbjct: 598 TTGMRNSNVMAIAPTATIANIVGVNPSIEPLYRNLYVKANMSGDFTVVNPSLVRDLKERG 657
Query: 669 IWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLN 728
+W + + DGS+ I +PE+LK +Y T +EI + LVD A R +IDQ+QSLN
Sbjct: 658 LWDEEMVTALKLHDGSLGPIDRVPEDLKNLYATAFEIDPIWLVDAASRRQKWIDQAQSLN 717
Query: 729 IHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
++M +P+ +K+ L+ R W +GLKT YYLRS+ A K T+
Sbjct: 718 LYMAEPSGRKLDELYRRAWRKGLKT-TYYLRSQGATHVEKSTL 759
>gi|414163223|ref|ZP_11419470.1| ribonucleoside-diphosphate reductase, alpha subunit [Afipia felis
ATCC 53690]
gi|410881003|gb|EKS28843.1| ribonucleoside-diphosphate reductase, alpha subunit [Afipia felis
ATCC 53690]
Length = 966
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 294/770 (38%), Positives = 434/770 (56%), Gaps = 61/770 (7%)
Query: 34 CDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHK----- 88
DP V + +Y G++ +L + A + P+YA ++AR+ + L
Sbjct: 178 VDPAPVLAEARRNLYDGISQDELALASIMAARTLVEQEPNYAYVSARLLLDKLRSEVLSF 237
Query: 89 --NTKKSFSETIKDMYNHYNE------RSGLKAPLIADDIYEI-IMKNAACLDSEIIYDR 139
T + S++ DM Y E ++G+++ L+ ++ + + AA L E R
Sbjct: 238 VHGTPSNASQS--DMATRYAEYFPAYIKTGIESELLDPELGRFDLARLAAALKPE----R 291
Query: 140 DFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQR 196
D + + G +TL Y L V G +E PQ MRV++G+ +ID AI+ Y+++S
Sbjct: 292 DLQFQFLGLQTLYDRYFLHVHGARIELPQAFFMRVAMGLAVREIDREARAIEFYNLLSSF 351
Query: 197 WFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIR 256
F ++PTLFN+GT RPQLSSCFL + DD ++GI++ +K+ A+++K +GG+G +R
Sbjct: 352 DFMASTPTLFNSGTLRPQLSSCFLTTVADD-LDGIFKAVKDNALLAKYSGGLGNDWTPVR 410
Query: 257 ATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKK 316
G++I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+L+K
Sbjct: 411 GLGAHIKGTNGESQGVVPFLKVANDTAIAVNQGG-KRKGAVCAYLETWHIDIEEFLDLRK 469
Query: 317 NHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER 376
N G + R D+ A WVPDLFM+RV+ +G+W+LF PNE L D +G F+ Y YE
Sbjct: 470 NTGDDRRRTHDMNTANWVPDLFMQRVEADGEWTLFSPNETPDLHDLYGPAFKTAYEGYEA 529
Query: 377 -----EGKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTE 431
E + K V+A +LW +LT ETG P++ FKD CN +S QQ+ G + SSNLCTE
Sbjct: 530 KAARGEIRVFKQVRATDLWRRMLTMLFETGHPWITFKDPCNLRSPQQHTGVVHSSNLCTE 589
Query: 432 IIEYTSPTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAI 491
I TS E AVCNL SI L +H +R D +KL
Sbjct: 590 ITLNTSADEVAVCNLGSINL-----------LNHTTR---------EGLDRDKLQRTITT 629
Query: 492 VTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIF 551
L+ +ID+N+Y + ARRSNL+HRP+G+G+ G D + + S A +
Sbjct: 630 AVRMLDNVIDINFYTIPEARRSNLKHRPVGMGLMGFQDALHVQRIPIASDAAVAFADESM 689
Query: 552 ETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR----------WDWG 601
E I YHA+ S ++A + G Y ++ S S+GIL D ++ R DW
Sbjct: 690 EIISYHAISASVDLAVERGRYPSFDGSLWSQGILPIDSVAILSKARDGAPLNASATLDWS 749
Query: 602 VLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR+ + K+G+RNS ++A PTA+ S I G + EP N++ + +SG+F VVN+HL+
Sbjct: 750 SLRERVRKDGMRNSNVMAIAPTATISNICGVAQSIEPSYQNLFVKSNMSGDFTVVNEHLV 809
Query: 662 HDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYI 721
HDL G+W + + + Y DGSV +I +P++LK +Y T +EI L++ A R +I
Sbjct: 810 HDLKSRGLWDEVMVSDLKYFDGSVGQIDRVPDDLKALYATAFEIDTSWLIESAARRQKWI 869
Query: 722 DQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTV 771
DQ+QSLN+++ P+ KK+ L+ W GLKT YYLRSR+A K T+
Sbjct: 870 DQAQSLNLYIANPSGKKLDQLYRLAWQLGLKT-TYYLRSRSATHVEKSTL 918
>gi|87311396|ref|ZP_01093516.1| ribonucleotide-diphosphate reductase alpha subunit [Blastopirellula
marina DSM 3645]
gi|87285808|gb|EAQ77722.1| ribonucleotide-diphosphate reductase alpha subunit [Blastopirellula
marina DSM 3645]
Length = 973
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 296/806 (36%), Positives = 455/806 (56%), Gaps = 59/806 (7%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V + DG +E ++ R+ GL ++C + ++ +Y G+T ++
Sbjct: 155 VKQEDGAKEPFDATRLRRRVYSAVRGLE-QNCSAEELVEETYRSLYDGITPQEIYRAMIL 213
Query: 63 TAAAMTTNHPDYASLAARI--------AVSNLHKNTKKSFSETIKDMYNHYNERSGLKAP 114
+ + PDY +AAR+ A+ LH K+ +E + ++ Y +G++A
Sbjct: 214 ASRSRIERDPDYDKVAARLMLMVIYNEAIGRLHP--KEDIAEVTRREFSTYIS-TGIEAG 270
Query: 115 LIADDIYEI-IMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMR 173
+A+ + + + K +A L E RD + Y G +T+ YLL + G+ +E PQ+ MR
Sbjct: 271 RLAERLRDFDLEKISAALRPE----RDAAFPYLGLQTIYDRYLLHIDGRRIETPQYFWMR 326
Query: 174 VSIGI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEG 230
V++G+ ++ + AI+ Y+++S FT A+PTLFN+GT PQLSSC+L + DD +E
Sbjct: 327 VAMGLAWNEENKEERAIEFYNILSTFRFTSATPTLFNSGTLHPQLSSCYLSTV-DDDLEH 385
Query: 231 IYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I++ + + A++SK AGG+G NIRAT ++I+GTNG S G++P L+V NDTA V+QGG
Sbjct: 386 IFKVVSDNAMLSKWAGGLGNDWTNIRATNAHIKGTNGQSQGVIPFLKVVNDTAIAVNQGG 445
Query: 291 GKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSL 350
KRKGA YLE WH D+ EFL+L+KN G + R D+ A W+PDLFM+RV+ N W+L
Sbjct: 446 -KRKGAVCSYLESWHLDVEEFLDLRKNTGDDRRRTHDMHTANWIPDLFMKRVRENADWTL 504
Query: 351 FCPNEASGLADCWGAEFEKLYTHYER---EGKAK--KVVQAQNLWFEILTSQIETGTPYM 405
F P+E L D G++F+ Y YE+ EGK + + + A LW ++LT ETG P++
Sbjct: 505 FSPDETPDLHDLCGSKFQARYEEYEKLADEGKMRLFRRLPANELWRKMLTRLFETGHPWI 564
Query: 406 LFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESH 465
+KD N +S Q ++G + SSNLCTEI+ TS E AVCNL SI L +R
Sbjct: 565 TWKDPSNVRSPQDHVGVVHSSNLCTEILLNTSKDEIAVCNLGSINLVAHIR--------- 615
Query: 466 PSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
N D EKL E L+ +ID+NYYP A+ SN RHRP+G+G+
Sbjct: 616 -----------NGELDLEKLQETVTTAARMLDNVIDINYYPTGEAKTSNARHRPVGMGLM 664
Query: 526 GLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL 585
G D LG+++ S EA + E I Y A+ SS++AA+ G YETY S +GIL
Sbjct: 665 GFQDALSSLGVSYASQEAVEFADRSMEAISYFAILASSQLAAERGTYETYAGSKWDRGIL 724
Query: 586 QPDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
D +++ +R DW V+RD + ++G+RNS ++A PTA+ S I+G ++
Sbjct: 725 PIDSLDILEQERGLPIEVDRSSTLDWQVVRDSVREHGMRNSNVMAIAPTATISTIVGVSQ 784
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEE 694
EP N++ + LSGEF +N ++ DL G+W + I Y DG + +I +P+
Sbjct: 785 SIEPTYKNLFVKSNLSGEFPQLNIRMVQDLKAEGLWDSDMVEAIKYYDGELTEIDRVPDH 844
Query: 695 LKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTG 754
LK+ Y T +E+ L++ R +ID QSLN++M QP+ +K+ ++ W+ GLKT
Sbjct: 845 LKLRYLTAFEVDSKWLIECGARRQKWIDMGQSLNLYMAQPSGRKLHDMYMLAWNVGLKT- 903
Query: 755 MYYLRSRAAADAIKFTVDTSVFKEKP 780
YYLR+ +A K T+D + F +P
Sbjct: 904 TYYLRTLSATQVEKSTIDVNRFGIQP 929
>gi|241589541|ref|YP_002979566.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12D]
gi|240868253|gb|ACS65912.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12D]
Length = 949
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 308/787 (39%), Positives = 439/787 (55%), Gaps = 60/787 (7%)
Query: 59 LAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIKDMYNHYNE------RSGLK 112
LAA T M P Y AAR+ ++ + + T ++ + Y E + +
Sbjct: 186 LAARTKIEM---EPAYTKAAARLVLALQLGHDVFGKAITFDELASSYGEAFARGIKEAVS 242
Query: 113 APLIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
A L+ADD+ + L + I +RD +DY G +TL YLL + GK +E PQ LM
Sbjct: 243 AELLADDMTRGF--DLQRLANAIRPERDCLWDYLGMQTLYDRYLLHIDGKRIELPQAFLM 300
Query: 173 RVSIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIE 229
RV++G+ +++++ AI+ Y ++S + ++PTLFN G+ R QLSSC+L + DD +E
Sbjct: 301 RVAMGLARNEVEREVRAIEFYEVLSTFDYMASTPTLFNTGSLRSQLSSCYLTTISDD-LE 359
Query: 230 GIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIY+ LKE A++SK AGG+G +RA GSYI+GTNG S GIVP L+V NDTA V+QG
Sbjct: 360 GIYDGLKENALLSKFAGGLGNDWTRVRALGSYIKGTNGKSQGIVPFLKVVNDTAVAVNQG 419
Query: 290 GGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWS 349
G KRKGA YLE WH DI EFL L+KN G + R D+ A W+PDLFM+RV W+
Sbjct: 420 G-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVHEGADWT 478
Query: 350 LFCPNEASGLADCWGAEFEKLYTHYEREGKAK-----KVVQAQNLWFEILTSQIETGTPY 404
LF PN+ L D +G++FE+ Y HYE A K A +LW ++L ETG P+
Sbjct: 479 LFSPNDVPDLHDLYGSKFEERYKHYEALADAGTLKHFKRAPAVDLWRKMLGLLFETGHPW 538
Query: 405 MLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIAL-PRFVREKDVPVE 463
+ FKD CN +S QQ++G + SSNLCTEI T+ +E AVCNL S+ L V++ D V
Sbjct: 539 ITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNLVAHLVKQADGSVA 598
Query: 464 SHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIG 523
D KL I L+ +ID+N+Y V AR SN+RHRP+G+G
Sbjct: 599 ----------------LDHVKLRRTIRIAMRMLDNVIDMNFYAVSKARTSNMRHRPVGLG 642
Query: 524 VQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKG 583
+ G D +LG+ F S A + + E I Y+A + SS++A + G Y +Y+ S SKG
Sbjct: 643 MMGYQDALYVLGIPFGSEAAVEFSDRSMEAICYYAYEASSDLAVERGVYPSYNGSLWSKG 702
Query: 584 ILQPDMWNVIPSDR------------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILG 631
IL D +++ +R DW LR+ I + G+RNS VA PTA+ S I+G
Sbjct: 703 ILPFDSIDLLVQERGEGYLDVDRSSSMDWDALREKIGRQGMRNSNCVAIAPTATISNIVG 762
Query: 632 NNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEI 691
+ EP N+Y + LSGEF +VN++L+ DL ++GIW + + + + DGSVQKI +
Sbjct: 763 VSASNEPQFQNLYVKSNLSGEFTLVNEYLVADLKKLGIWDEVMLSDLKFYDGSVQKIDRV 822
Query: 692 PEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGL 751
P ++K Y T +EI+ V+ R +IDQ+QSLNI+M + KK+ ++ W RGL
Sbjct: 823 PADIKARYATAFEIEPSWSVEAGARRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGL 882
Query: 752 KTGMYYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQ-----VVCSLT----N 802
KT YYLR+ AA K TV ++ T+ ++ VC +
Sbjct: 883 KT-TYYLRTIAATSVEKSTVPLGTLNAVAPSSQMATQQTTQSSEPDVEGRVCMFRPGDPD 941
Query: 803 REECMAC 809
E C AC
Sbjct: 942 FEGCQAC 948
>gi|302877616|ref|YP_003846180.1| ribonucleoside-diphosphate reductase subunit alpha [Gallionella
capsiferriformans ES-2]
gi|302580405|gb|ADL54416.1| ribonucleoside-diphosphate reductase, alpha subunit [Gallionella
capsiferriformans ES-2]
Length = 944
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 308/834 (36%), Positives = 453/834 (54%), Gaps = 58/834 (6%)
Query: 3 VVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAE 62
V +DG + + +++ ++ GL E D LV Q +Y GV ++ +
Sbjct: 141 VTGKDGVVQPLDLARLSVLVQSACEGLG-EVVDAELVLQVALKDMYDGVPLHEVHKCLIL 199
Query: 63 TAAAMTTNHPDYASLAARIAVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAP 114
+A +M P Y + AR+ ++N+ + E + DM Y + + G+ A
Sbjct: 200 SARSMIEKEPAYNFVTARLLLNNI---CSEVLGEDVAPADMATRYADYFPKFIKRGIAAE 256
Query: 115 LIADDIYEIIMKNAACLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
L+ + + + L +E+ RD + Y G +TL Y L + G +E PQ MRV
Sbjct: 257 LLDEKLAGFDLPR---LAAELDASRDLQFGYLGLQTLYDRYFLHIGGTRIEAPQVFFMRV 313
Query: 175 SIGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGI 231
++G+ ++ID AI+ Y ++S F ++PTLFN+G+ R QLSSC+L ++D+ +EGI
Sbjct: 314 AMGLALNEIDREARAIEFYRLLSGFDFMCSTPTLFNSGSRRSQLSSCYLSTVEDN-LEGI 372
Query: 232 YETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGG 291
Y+ +K+ A+++K AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG
Sbjct: 373 YDAIKDNALLAKFAGGLGNDWTPVRALGAHIKGTNGESQGVVPFLKVVNDTAVAVNQGG- 431
Query: 292 KRKGAFAVYLEPWHADIFEFLNLKKNHGKEEHRARDLFYALWVPDLFMERVQTNGQWSLF 351
KRKGA YLE WH DI EFL+L+KN G + R D+ + W+PDLFM+RV G W+LF
Sbjct: 432 KRKGAVCAYLETWHLDIEEFLDLRKNTGDDRRRTHDMNTSNWIPDLFMKRVMEGGNWTLF 491
Query: 352 CPNEASGLADCWGAEFEKLYTHYEREGKAK-----KVVQAQNLWFEILTSQIETGTPYML 406
P++ L D +G +FE YT YE + A K VQA +LW ++LT ETG P++
Sbjct: 492 SPSDVKDLHDLFGIDFEIAYTAYEEKAAAGQIKLYKTVQAASLWRKMLTMLFETGHPWIT 551
Query: 407 FKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKDVPVESHP 466
FKD CN +S QQ++G + SSNLCTEI T+ E AVCNL S+ LP + E H
Sbjct: 552 FKDPCNIRSPQQHVGVVHSSNLCTEITLNTNADEIAVCNLGSVNLPAHLYP-----EGHD 606
Query: 467 SRIVGSRGSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
+ G D KL L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 607 --LAGQ-------IDHAKLRRTINTAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMG 657
Query: 527 LADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQ 586
D L + + S EA + E + Y+A S+E+A + G Y +Y S GIL
Sbjct: 658 FQDCLHQLRLPYSSMEAVEFADRSMEAVCYYAYWASTELAEERGRYASYKGSLWDCGILP 717
Query: 587 PDMWNVIPSDR-----------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D +++ +R DW LR I + G+RNS VA PTA+ S I+G + C
Sbjct: 718 QDTLDLLREERGGYVEVDTSVSMDWDALRARIGQYGMRNSNCVAIAPTATISNIIGVSAC 777
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPTIKNKIIYDDGSVQKIPEIPEEL 695
EP N++ + LSGEF V+N HL+ +L +G+W + + + Y DGS+ KI IP EL
Sbjct: 778 IEPTYQNLFVKSNLSGEFTVINDHLVAELKRLGLWDEVMISDLKYFDGSLAKIDRIPAEL 837
Query: 696 KMIYKTVWEIKQMTLVDMAVDRGCYIDQSQSLNIHMDQPNFKKVTSLHFRTWSRGLKTGM 755
+ +Y T +E++ L++ A R +IDQ+QSLNI+M + +K+ + W RGLKT
Sbjct: 838 RSLYATAFEVEPSWLIEAASRRQKWIDQAQSLNIYMAGVSGRKLDDTYKLAWVRGLKT-T 896
Query: 756 YYLRSRAAADAIKFTVDTSVFKEKPEKPELVVDDETKMAQVVCSLTNREECMAC 809
YYLR+ A A K T + V D CS+ N EC AC
Sbjct: 897 YYLRTLGATSAEKSTGRAGALN------AVSVGDAPAETTQFCSIDN-PECEAC 943
>gi|393778161|ref|ZP_10366443.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia sp.
PBA]
gi|392714896|gb|EIZ02488.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia sp.
PBA]
Length = 975
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 303/768 (39%), Positives = 424/768 (55%), Gaps = 53/768 (6%)
Query: 35 DPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIAVSNLHKNTKKSF 94
DP + + +Y GV SQ+ + A A + P Y+ + ARI LH K+
Sbjct: 185 DPEPILAETIKNLYDGVPMSQVYDSAILAARTLIEQDPAYSQVTARIL---LHTIRKEIL 241
Query: 95 SETIK--DMYNHYNE------RSGLKAPLIADDIYEI-IMKNAACLDSEIIYDRDFDYDY 145
E + +M Y E + G+ A L+ + + + + K A LD+ RDF ++Y
Sbjct: 242 GEEVTQGEMVTRYAEYFPKYIKRGIDAELLDEKLAQFDLQKLGAALDAS----RDFQFNY 297
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVSIGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L +E PQ MRV++G+ ++ID AI+ Y ++S F ++
Sbjct: 298 LGLQTLYDRYFLHHNDVRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSST 357
Query: 203 PTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R QLSSC+L + DD ++GIYE LKE A++SK AGG+G N+RA GS+I
Sbjct: 358 PTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 416
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLNLKKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL L+KN G +
Sbjct: 417 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 475
Query: 323 HRARDLFYALWVPDLFMERVQTNGQWSLFCPNEASGLADCWGAEFEKLYTHYER-----E 377
R D+ A W+PDLFM+RV G W+LF P+ L D +G FE+ Y YE E
Sbjct: 476 RRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGKAFEEAYVAYEDKVARGE 535
Query: 378 GKAKKVVQAQNLWFEILTSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI T+
Sbjct: 536 LKLFKKIPAVQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 595
Query: 438 PTETAVCNLASIALPRFVREKDVPVESHPSRIVGSRGSKNRFFDFEKLAEVTAIVTENLN 497
+E AVCNL S+ L ++ + S D +KL + L+
Sbjct: 596 DSEIAVCNLGSVNLLAHMK---------------ADASGAMVLDHDKLKKTIRTAMRMLD 640
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D + + + S A Q E + Y+
Sbjct: 641 NVIDINYYAVKKARDSNLRHRPVGMGIMGFQDCLHAMRVPYASDAAVQFADTSMEAVCYY 700
Query: 558 ALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDR-----------WDWGVLRDM 606
A S+E+A + G Y +Y S +GIL D ++ +R DW LR
Sbjct: 701 AYWASTELAEERGRYSSYRGSLWDRGILPQDSLKLLAEERGGYVEVDHSSTMDWDSLRGR 760
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN L+ DL
Sbjct: 761 IKSYGMRNSNCIAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDFLVRDLKA 820
Query: 667 MGIWSPTIKNKIIYDDGSVQKIPEIPEELKMIYKTVWEIKQMTLVDMAVDRGCYIDQSQS 726
G+W + + Y DGS+ +I IP++L+ +Y T +E++ LV+ A R +IDQ+QS
Sbjct: 821 NGLWDEVMVADLKYFDGSLARIDRIPQDLRALYATAFEVEPQWLVEAASRRQKWIDQAQS 880
Query: 727 LNIHMDQPNFKKVTSLHFRTWSRGLKTGMYYLRSRAAADAIKFTVDTS 774
LNI+M + KK+ + W RGLKT YYLR+ A A K TV S
Sbjct: 881 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHAEKSTVSRS 927
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,720,063,846
Number of Sequences: 23463169
Number of extensions: 544728673
Number of successful extensions: 1255888
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6134
Number of HSP's successfully gapped in prelim test: 508
Number of HSP's that attempted gapping in prelim test: 1212996
Number of HSP's gapped (non-prelim): 10576
length of query: 811
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 660
effective length of database: 8,816,256,848
effective search space: 5818729519680
effective search space used: 5818729519680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)