Query         003562
Match_columns 810
No_of_seqs    495 out of 4049
Neff          7.9 
Searched_HMMs 29240
Date          Tue Mar 26 18:17:03 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/003562.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1610-1613//hhsearch_pdb/003562hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3e7a_A PP-1A, serine/threonine   1.0       1       1  559.5  30.2  291  456-762     8-298 (299)
  2 1fjm_A Protein serine/threonin   1.0       1       1  540.6  30.2  318  456-799     9-327 (330)
  3 3icf_A PPT, serine/threonine-p   1.0       1       1  537.1  28.8  291  452-766    13-322 (335)
  4 3ll8_A Serine/threonine-protei   1.0       1       1  535.5  30.3  288  456-766    30-328 (357)
  5 3h63_A Serine/threonine-protei   1.0       1       1  532.3  30.4  292  451-766    11-308 (315)
  6 1aui_A Calcineurin, serine/thr   1.0       1       1  527.8  30.8  288  456-766    43-341 (521)
  7 2ie4_C PP2A-alpha;, serine/thr   1.0       1       1  511.6  29.9  288  454-765     8-295 (309)
  8 1wao_1 Serine/threonine protei   1.0       1       1  493.6  34.2  291  452-766   165-461 (477)
  9 2z72_A Protein-tyrosine-phosph   1.0       1       1  305.5  11.5  243  495-752    60-322 (342)
 10 3ii7_A Kelch-like protein 7; p   1.0       1       1  281.1  32.1  262    1-307    25-290 (306)

No 1  
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=1.00  E-value=1  Score=559.51  Aligned_cols=291  Identities=47%  Similarity=0.880  Sum_probs=275.5

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999998399988899885322599999999999999983199557533985999167899899999999819999999
Q 003562          456 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  535 (810)
Q Consensus       456 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~pi~vvGDiHG~~~~L~~~l~~~~~~~~~~  535 (810)
                      .+.+|++|++.+.+++..  ...++++++..||++|+++|.+||+++++++|++||||||||+.+|+++|+..++++.. 
T Consensus         8 ~d~~i~~l~~~~~~~~~~--~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~-   84 (299)
T 3e7a_A            8 LDSIIGRLLEVQGSRPGK--NVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES-   84 (299)
T ss_dssp             HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred             HHHHHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCC-
T ss_conf             999999997322568875--56789999999999999999749873602897799951889999999999980999976-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             96301499963646899982999999999765089967993378620000110288589998609887611122101002
Q 003562          536 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  615 (810)
Q Consensus       536 ~~~~~~~vfLGDyvDrG~~s~e~l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  615 (810)
                           +|||||||||||++|+||+.+|+++|+++|+++++||||||.+.++..|||++||..+|+    ..+|+.+.++|
T Consensus        85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~----~~l~~~~~~~f  155 (299)
T 3e7a_A           85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF  155 (299)
T ss_dssp             -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHH----HHHHHHHHHHH
T ss_conf             -----189688614778882999999999875479828998268501110123331178888755----89999999998


Q ss_pred             CCCCEEEEECCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHH
Q ss_conf             46750699859389841886786542544310258810499952544300389999997879776999994034299999
Q 003562          616 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV  695 (810)
Q Consensus       616 ~~lPl~a~i~~~il~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~  695 (810)
                      ++||+++++++++|||||||+|.+.++++|+.+.||.+++..+ +++|+|||||..  ...+|.+|+||.| +.||++++
T Consensus       156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~--~~~~~~~~~RG~~-~~fG~~~~  231 (299)
T 3e7a_A          156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV  231 (299)
T ss_dssp             TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred             HHCCCEEEECCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCH-HHHHHHCCCCCC--CCCCCCCCCCCCC-EEECHHHH
T ss_conf             6298338987829998576686557899997364887688610-356643378644--5567565889860-21388999


Q ss_pred             HHHHHHCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCC
Q ss_conf             9999865970899802212356079539928999725787798898399999938623997990489
Q 003562          696 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPL  762 (810)
Q Consensus       696 ~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~  762 (810)
                      ++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+++++++|.
T Consensus       232 ~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~  298 (299)
T 3e7a_A          232 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA  298 (299)
T ss_dssp             HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred             HHHHHHCCCEEEEECCEEEECCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCC
T ss_conf             9999987982999857020046599069949999897542789885179999989984889995689


No 2  
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=1.00  E-value=1  Score=540.63  Aligned_cols=318  Identities=45%  Similarity=0.815  Sum_probs=287.6

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999998399988899885322599999999999999983199557533985999167899899999999819999999
Q 003562          456 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  535 (810)
Q Consensus       456 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~pi~vvGDiHG~~~~L~~~l~~~~~~~~~~  535 (810)
                      ++++|.+|++.+.+++.  ....|+++++..||++++++|.+||+++++..|++||||||||+++|+++|+..++++.+ 
T Consensus         9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~-   85 (330)
T 1fjm_A            9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES-   85 (330)
T ss_dssp             HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred             HHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCC-
T ss_conf             99999999725356776--467789999999999999999749986852476588437878899999999985899866-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             96301499963646899982999999999765089967993378620000110288589998609887611122101002
Q 003562          536 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  615 (810)
Q Consensus       536 ~~~~~~~vfLGDyvDrG~~s~e~l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  615 (810)
                           .|||||||||||++|+||+.+|++||+.||.++++||||||.+.++..|||++||..+|+    ..+|..+.++|
T Consensus        86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f  156 (330)
T 1fjm_A           86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF  156 (330)
T ss_dssp             -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHH
T ss_conf             -----289689867888876999999998655258855786077357665433212366654313----99999999999


Q ss_pred             CCCCEEEEECCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHH
Q ss_conf             46750699859389841886786542544310258810499952544300389999997879776999994034299999
Q 003562          616 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRV  695 (810)
Q Consensus       616 ~~lPl~a~i~~~il~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~  695 (810)
                      +.||++++++++++|||||++|.+.++++|+.+.||.+.+..+ +++|+|||||..  ...+|.+|.||.+ +.||++++
T Consensus       157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~--~~~~w~~~~rG~~-~~fG~~~~  232 (330)
T 1fjm_A          157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV  232 (330)
T ss_dssp             TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred             HHCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCC-HHHHHHHCCCCC--CCCCCCCCCCCCC-EEECHHHH
T ss_conf             8298559985829998067785547788876640676576522-477887528765--5578675568970-33373779


Q ss_pred             HHHHHHCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             99998659708998022123560795399289997257877988983999999386239979904899999999999721
Q 003562          696 SDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPER  775 (810)
Q Consensus       696 ~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  775 (810)
                      .+||+++++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+++++|+|.+... .       
T Consensus       233 ~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~~~~~~-~-------  304 (330)
T 1fjm_A          233 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNK-G-------  304 (330)
T ss_dssp             HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECCCC------------
T ss_pred             HHHHHHCCCCEEECCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC-C-------
T ss_conf             99998589864766664225875881699499981884103377876799998799857689962786443-3-------


Q ss_pred             CCHHHHHHH-HHCCCCCCCCCCCCC
Q ss_conf             110468887-421899999999999
Q 003562          776 VIDDMWMQE-LNIQRPPTPTRGRPQ  799 (810)
Q Consensus       776 ~~~~~~~~~-~~~~~~~~~~~~~~~  799 (810)
                        ...|+.+ ....||+||||++++
T Consensus       305 --~~~~~~~~~~~~~~~~~~~~~~~  327 (330)
T 1fjm_A          305 --KYGQFSGLNPGGRPITPPRNSAK  327 (330)
T ss_dssp             -------------------------
T ss_pred             --CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             --32221100013589989987411


No 3  
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=1.00  E-value=1  Score=537.09  Aligned_cols=291  Identities=35%  Similarity=0.646  Sum_probs=270.2

Q ss_pred             CHHHHHHHH-HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC------EEEEECCCCCHHHHHHH
Q ss_conf             604799999-99839998889988532259999999999999998319955753398------59991678998999999
Q 003562          452 PQGLHKKII-STLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP------VKVFGDLHGQFGDLMRL  524 (810)
Q Consensus       452 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~p------i~vvGDiHG~~~~L~~~  524 (810)
                      ...+++++| +.+.+.+          .|+++++..||++++++|++||+++++..|      ++||||||||+++|+++
T Consensus        13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l   82 (335)
T 3icf_A           13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL   82 (335)
T ss_dssp             CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHH
T ss_conf             99999999999998289----------99999999999999999984998688437766672489980577799999999


Q ss_pred             HHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHHHHCCCCC
Q ss_conf             99819999999963014999636468999829999999997650899679933786200001102885899986098876
Q 003562          525 FDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDG  604 (810)
Q Consensus       525 l~~~~~~~~~~~~~~~~~vfLGDyvDrG~~s~e~l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~  604 (810)
                      |+..++++...     +|||||||||||++|+||+.+|+++|+++|+++++||||||.+.++..|||.+||..+|+    
T Consensus        83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~----  153 (335)
T 3icf_A           83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS----  153 (335)
T ss_dssp             HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred             HHHCCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCHHHHHHCC----
T ss_conf             99708999896-----899958833777571999999999744178827996575365332110242067675404----


Q ss_pred             CCCCCCCCCCCCCCCEEEEECCCEEEECCCC-CCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             1112210100246750699859389841886-786542544310258810499952544300389999997879776999
Q 003562          605 IWAWTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNAR  683 (810)
Q Consensus       605 ~~~~~~~~~~f~~lPl~a~i~~~il~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~r  683 (810)
                      ..+|+.+.++|++||+++++++++||||||+ +|.+.++++|+.+.|+.+++..+ +++|+|||||..   ..+|.+|+|
T Consensus       154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~---~~g~~~s~R  229 (335)
T 3icf_A          154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQE---ANGMGPSQR  229 (335)
T ss_dssp             HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECCC
T ss_pred             HHHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCC-CHHHHHCCCCCC---CCCCCCCCC
T ss_conf             8999999999863510279768089964786887657789997576654431123-212210368877---687563778


Q ss_pred             CCCEEEECHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECC-----------CC
Q ss_conf             9940342999999999865970899802212356079539928999725787798898399999938-----------62
Q 003562          684 GPGLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGR-----------GL  752 (810)
Q Consensus       684 g~~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~-----------~~  752 (810)
                      |.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++           ++
T Consensus       230 G~g-~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~  308 (335)
T 3icf_A          230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQ  308 (335)
T ss_dssp             C---EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCT
T ss_pred             CCC-EEECHHHHHHHHHHCCCEEEEECCCEECCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf             875-0248899999999889848997474004738996699389997786437788972699998065454333455667


Q ss_pred             EEEEEEECCCCCCC
Q ss_conf             39979904899999
Q 003562          753 VVVPKLIHPLPPPL  766 (810)
Q Consensus       753 ~~~~~~~~~~~~~~  766 (810)
                      .+.++.|.+.|...
T Consensus       309 ~~~~~~f~~~~~~~  322 (335)
T 3icf_A          309 NLIIETFEAVEHPD  322 (335)
T ss_dssp             TEEEEEECCCCCCS
T ss_pred             CEEEEEEECCCCCC
T ss_conf             52389974589999


No 4  
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=1.00  E-value=1  Score=535.49  Aligned_cols=288  Identities=36%  Similarity=0.624  Sum_probs=264.8

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999998399988899885322599999999999999983199557533985999167899899999999819999999
Q 003562          456 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  535 (810)
Q Consensus       456 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~pi~vvGDiHG~~~~L~~~l~~~~~~~~~~  535 (810)
                      .+.+++.+.+.+          .++++++.+||++++++|++||+++++.+|++||||||||+.+|+++|+..+.++.. 
T Consensus        30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~-   98 (357)
T 3ll8_A           30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT-   98 (357)
T ss_dssp             HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred             HHHHHHHHHHCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCC-
T ss_conf             999999998579----------899999999999999999849986876364005316888899999999962899986-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             96301499963646899982999999999765089967993378620000110288589998609887611122101002
Q 003562          536 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  615 (810)
Q Consensus       536 ~~~~~~~vfLGDyvDrG~~s~e~l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  615 (810)
                           +|||||||||||++|+||+.+|+++|++||+++++||||||.+.++..|||++||..+|+    ..+|+.+.++|
T Consensus        99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~----~~l~~~~~~~f  169 (357)
T 3ll8_A           99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF  169 (357)
T ss_dssp             -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCHHHHHHCCC----HHHHHHHHHHH
T ss_conf             -----799888705788675999999998665469848998276565432112672356553133----36899999999


Q ss_pred             CCCCEEEEECCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCC----CCCCCC-CCCCCCEEEE
Q ss_conf             46750699859389841886786542544310258810499952544300389999997----879776-9999940342
Q 003562          616 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDS----IEGLRP-NARGPGLVTF  690 (810)
Q Consensus       616 ~~lPl~a~i~~~il~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~----~~~~~~-n~rg~~~~~f  690 (810)
                      ++||++++++++++||||||+|.+.++++|+.+.|+.+++..+ .++|+|||||.+...    ..+|.+ ++||+| +.|
T Consensus       170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g-~~F  247 (357)
T 3ll8_A          170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY  247 (357)
T ss_dssp             HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSS-EEE
T ss_pred             HHCCCCEEECCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCC-CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-EEE
T ss_conf             7388205972528999267685547798875244665577667-16676605863224666655424457778872-388


Q ss_pred             CHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCC------EEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCC
Q ss_conf             9999999998659708998022123560795399------2899972578779889839999993862399799048999
Q 003562          691 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQG------QLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP  764 (810)
Q Consensus       691 g~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~~  764 (810)
                      |++++++||++|++++||||||++++||++++++      +|||||||||||+.++|+||+|.++++. ..++.|.+.|-
T Consensus       248 G~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~~~-~~~~~f~~~~h  326 (357)
T 3ll8_A          248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH  326 (357)
T ss_dssp             CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEETTE-EEEEEECCCCC
T ss_pred             CHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCC-CEEEEECCCCC
T ss_conf             95899999998799599980313116048845886789985899979986589888537999998996-35999568899


Q ss_pred             CC
Q ss_conf             99
Q 003562          765 PL  766 (810)
Q Consensus       765 ~~  766 (810)
                      .+
T Consensus       327 p~  328 (357)
T 3ll8_A          327 PY  328 (357)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             88


No 5  
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=1.00  E-value=1  Score=532.30  Aligned_cols=292  Identities=32%  Similarity=0.583  Sum_probs=271.1

Q ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC----EEEEECCCCCHHHHHHHHH
Q ss_conf             960479999999839998889988532259999999999999998319955753398----5999167899899999999
Q 003562          451 SPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFD  526 (810)
Q Consensus       451 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~p----i~vvGDiHG~~~~L~~~l~  526 (810)
                      -...+.+++|+.+.+.+          .|++.++.+||.+|+++|++||++++++.|    ++||||||||+.+|+++|+
T Consensus        11 ~~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~   80 (315)
T 3h63_A           11 VTISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFE   80 (315)
T ss_dssp             CCHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf             89999999999998079----------99999999999999999985998478724888427998058878999999999


Q ss_pred             HHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHHHHCCCCCCC
Q ss_conf             81999999996301499963646899982999999999765089967993378620000110288589998609887611
Q 003562          527 EYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIW  606 (810)
Q Consensus       527 ~~~~~~~~~~~~~~~~vfLGDyvDrG~~s~e~l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~  606 (810)
                      ..++++...     .|||||||||||++|+||+.+|++||+++|+++++||||||.+.++..|||.+||..+|+    ..
T Consensus        81 ~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~----~~  151 (315)
T 3h63_A           81 LNGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQ  151 (315)
T ss_dssp             HHCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HH
T ss_pred             HHCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH----HH
T ss_conf             747998887-----899968842778572999999998413269847998367511000101330078898740----67


Q ss_pred             CCCCCCCCCCCCCEEEEECCCEEEECCCC-CCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             12210100246750699859389841886-78654254431025881049995254430038999999787977699999
Q 003562          607 AWTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGP  685 (810)
Q Consensus       607 ~~~~~~~~f~~lPl~a~i~~~il~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~  685 (810)
                      +|+.+.++|++||++++++++++|||||+ +|.+.++++|+.+.|+.+.+..+ +++|+|||||..   ..+|.+|+||.
T Consensus       152 l~~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~---~~g~~~s~RG~  227 (315)
T 3h63_A          152 MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGV  227 (315)
T ss_dssp             HHHHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSS
T ss_pred             HHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCC-HHHHHEECCCCC---CCCCCCCCCCC
T ss_conf             89999999852983899869789967987876668899998474666543344-055403068987---78857489985


Q ss_pred             CEEEECHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEC-CCCEEEEEEECCCCC
Q ss_conf             4034299999999986597089980221235607953992899972578779889839999993-862399799048999
Q 003562          686 GLVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVG-RGLVVVPKLIHPLPP  764 (810)
Q Consensus       686 ~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~-~~~~~~~~~~~~~~~  764 (810)
                      | +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.++ ++++..++.|.+.|.
T Consensus       228 g-~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~  306 (315)
T 3h63_A          228 S-CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPH  306 (315)
T ss_dssp             S-EEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCC
T ss_pred             E-EEECHHHHHHHHHHCCCCEEEEECEEECCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCC
T ss_conf             2-787889999999986991899826240388599359939999898653778886379999987987074699746899


Q ss_pred             CC
Q ss_conf             99
Q 003562          765 PL  766 (810)
Q Consensus       765 ~~  766 (810)
                      ..
T Consensus       307 ~~  308 (315)
T 3h63_A          307 PN  308 (315)
T ss_dssp             CS
T ss_pred             CC
T ss_conf             98


No 6  
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=1.00  E-value=1  Score=527.83  Aligned_cols=288  Identities=37%  Similarity=0.629  Sum_probs=265.3

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             99999998399988899885322599999999999999983199557533985999167899899999999819999999
Q 003562          456 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG  535 (810)
Q Consensus       456 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~pi~vvGDiHG~~~~L~~~l~~~~~~~~~~  535 (810)
                      ++.++.++.+.+          .|+++++..||+++.++|.+||+++++..|++|||||||||++|+++|+..+.++.. 
T Consensus        43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d-  111 (521)
T 1aui_A           43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT-  111 (521)
T ss_dssp             HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred             HHHHHHHHHHCC----------CCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCC-
T ss_conf             999999997079----------899999999999999999868985764363023047877799999999960799765-


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             96301499963646899982999999999765089967993378620000110288589998609887611122101002
Q 003562          536 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF  615 (810)
Q Consensus       536 ~~~~~~~vfLGDyvDrG~~s~e~l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~f  615 (810)
                           .|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||++||..+|+    ..+|..+.++|
T Consensus       112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~----~~l~~~~~~~f  182 (521)
T 1aui_A          112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF  182 (521)
T ss_dssp             -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred             -----EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHH----HHHHHHHHHHH
T ss_conf             -----699717757888787999999999750178808996377508999877175378888640----58899999999


Q ss_pred             CCCCEEEEECCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCC----CCCCCCC-CCCCCEEEE
Q ss_conf             46750699859389841886786542544310258810499952544300389999997----8797769-999940342
Q 003562          616 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDS----IEGLRPN-ARGPGLVTF  690 (810)
Q Consensus       616 ~~lPl~a~i~~~il~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~----~~~~~~n-~rg~~~~~f  690 (810)
                      ++||++++++++++|||||++|.+.++++|+.+.|+.+++..+ +++|+|||||.....    ..+|.+| .||++ +.|
T Consensus       183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g-~~F  260 (521)
T 1aui_A          183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY  260 (521)
T ss_dssp             TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred             HHCCCEEEECCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCC-HHHHHEECCCCCCCCCCCCCCCEECCCCCCCC-CCC
T ss_conf             8588027964872687777675657777764225776787412-13431234752124655567640026677866-544


Q ss_pred             CHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCC------EEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCC
Q ss_conf             9999999998659708998022123560795399------2899972578779889839999993862399799048999
Q 003562          691 GPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQG------QLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPP  764 (810)
Q Consensus       691 g~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~~  764 (810)
                      |++++++||++|++++||||||++++||++++++      +|||||||||||+.++|+||+|.++++ .+.++.|.+.+.
T Consensus       261 G~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~~-~~~~~~f~~~~~  339 (521)
T 1aui_A          261 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH  339 (521)
T ss_dssp             CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred             CHHHHHHHHHHCCCCEEEECCCHHCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECC-CCEEEEECCCCC
T ss_conf             8899999999869938997662020640541488678898289991886647788843899998089-634899558898


Q ss_pred             CC
Q ss_conf             99
Q 003562          765 PL  766 (810)
Q Consensus       765 ~~  766 (810)
                      .+
T Consensus       340 p~  341 (521)
T 1aui_A          340 PY  341 (521)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             87


No 7  
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=1.00  E-value=1  Score=511.58  Aligned_cols=288  Identities=40%  Similarity=0.713  Sum_probs=269.9

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf             47999999983999888998853225999999999999999831995575339859991678998999999998199999
Q 003562          454 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPST  533 (810)
Q Consensus       454 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~pi~vvGDiHG~~~~L~~~l~~~~~~~~  533 (810)
                      .-++.+|+.+.+..          .++++++..||++|+++|++||+++++..|++||||||||+++|.++|+..+.++.
T Consensus         8 ~~~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~   77 (309)
T 2ie4_C            8 KELDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPD   77 (309)
T ss_dssp             HHHHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTT
T ss_pred             HHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCC
T ss_conf             99999999997379----------98999999999999999975898773368779981577889999999997499999


Q ss_pred             CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             99963014999636468999829999999997650899679933786200001102885899986098876111221010
Q 003562          534 AGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQ  613 (810)
Q Consensus       534 ~~~~~~~~~vfLGDyvDrG~~s~e~l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~  613 (810)
                      .      .|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||.+||..+|+..   .+|+.+.+
T Consensus        78 ~------~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~  148 (309)
T 2ie4_C           78 T------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTD  148 (309)
T ss_dssp             S------CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHH
T ss_pred             C------EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCH---HHHHHHHH
T ss_conf             8------89991886688877099999999987637883799847888888744644428877631417---89999999


Q ss_pred             CCCCCCEEEEECCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHH
Q ss_conf             02467506998593898418867865425443102588104999525443003899999978797769999940342999
Q 003562          614 LFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPD  693 (810)
Q Consensus       614 ~f~~lPl~a~i~~~il~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~  693 (810)
                      +|++||++++++++++|||||++|.+.++++|+.+.|+.+.+..+ .++|+|||||..   ..+|.+++||.| +.||++
T Consensus       149 ~~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~---~~~~~~s~RG~g-~~fG~~  223 (309)
T 2ie4_C          149 LFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQD  223 (309)
T ss_dssp             HTTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHH
T ss_pred             HHHHCCCEEEECCCEEEECCCCCCCCCCHHHHHHHCCCCCCCHHH-HHHHHHHCCCCC---CCCCCCCCCCCC-CCCCHH
T ss_conf             998398159986819997888887666788887530566687167-789874179754---555445778862-133889


Q ss_pred             HHHHHHHHCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCC
Q ss_conf             999999865970899802212356079539928999725787798898399999938623997990489999
Q 003562          694 RVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPP  765 (810)
Q Consensus       694 ~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~~~~~~~~~~~~~~~~  765 (810)
                      ++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+.++.|.|.+..
T Consensus       224 ~~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~~~~~~  295 (309)
T 2ie4_C          224 ISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR  295 (309)
T ss_dssp             HHHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEECCCC--
T ss_pred             HHHHHHHHCCCEEEEECCCCEECCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf             999999984972898168012387799429939999798640357787079999878985768998578986


No 8  
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=1.00  E-value=1  Score=493.65  Aligned_cols=291  Identities=33%  Similarity=0.595  Sum_probs=267.6

Q ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC----EEEEECCCCCHHHHHHHHHH
Q ss_conf             60479999999839998889988532259999999999999998319955753398----59991678998999999998
Q 003562          452 PQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDE  527 (810)
Q Consensus       452 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~e~~~l~~~~p----i~vvGDiHG~~~~L~~~l~~  527 (810)
                      .....+.++..+.+.+          .+++.++..||.++.++|.+||++++++.|    ++||||||||+.+|.++|+.
T Consensus       165 tl~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~  234 (477)
T 1wao_1          165 TISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFEL  234 (477)
T ss_dssp             CHHHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCC----------CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf             1799999999997679----------899999999999999997269975973058876069981787877999999997


Q ss_pred             HCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHHHHCCCCCCCC
Q ss_conf             19999999963014999636468999829999999997650899679933786200001102885899986098876111
Q 003562          528 YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA  607 (810)
Q Consensus       528 ~~~~~~~~~~~~~~~vfLGDyvDrG~~s~e~l~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~  607 (810)
                      .+.++..+     .|||||||||||++|+||+.+|+++|+++|.++++||||||.+.++..|||..||..+|+.    .+
T Consensus       235 ~~~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~  305 (477)
T 1wao_1          235 NGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QM  305 (477)
T ss_dssp             HCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----TH
T ss_pred             CCCCCCCC-----EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHH----HH
T ss_conf             59998767-----4898366457783629999999999864899668605774077775306839999998629----99


Q ss_pred             CCCCCCCCCCCCEEEEECCCEEEECCCC-CCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2210100246750699859389841886-786542544310258810499952544300389999997879776999994
Q 003562          608 WTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPG  686 (810)
Q Consensus       608 ~~~~~~~f~~lPl~a~i~~~il~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~~~~~~~n~rg~~  686 (810)
                      |..+.++|++||+++++++++||||||+ +|...++++|+.+.|+.+.+..+ .++|+|||||..   ..+|.+++||.+
T Consensus       306 ~~~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~---~~~~~~~~rg~~  381 (477)
T 1wao_1          306 YELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS  381 (477)
T ss_dssp             HHHHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSCEECTTSSS
T ss_pred             HHHHHHHHCCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHH-HHHHHCCCCCCC---CCCCCCCCCCCC
T ss_conf             9999998602883799748289977997866668988997366878895255-554311378876---678685888875


Q ss_pred             EEEECHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEE-CCCCEEEEEEECCCCCC
Q ss_conf             03429999999998659708998022123560795399289997257877988983999999-38623997990489999
Q 003562          687 LVTFGPDRVSDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVV-GRGLVVVPKLIHPLPPP  765 (810)
Q Consensus       687 ~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~-~~~~~~~~~~~~~~~~~  765 (810)
                       +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+ ++++++.++.|.+.+..
T Consensus       382 -~~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~  460 (477)
T 1wao_1          382 -CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHP  460 (477)
T ss_dssp             -EEECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCC
T ss_pred             -EEECHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCC
T ss_conf             -5678899999999849769998998873986991599499996786214688865799999879872778998478999


Q ss_pred             C
Q ss_conf             9
Q 003562          766 L  766 (810)
Q Consensus       766 ~  766 (810)
                      .
T Consensus       461 ~  461 (477)
T 1wao_1          461 N  461 (477)
T ss_dssp             S
T ss_pred             C
T ss_conf             9


No 9  
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=1.00  E-value=1  Score=305.51  Aligned_cols=243  Identities=18%  Similarity=0.216  Sum_probs=189.6

Q ss_pred             HHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCC--CEEEEEEECCCCCCCCCHHHHHHHHHHHHH---CC
Q ss_conf             8319955753398599916789989999999981999999996--301499963646899982999999999765---08
Q 003562          495 FMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDI--TYIDYLFLGDYVDRGQHSLETITLLLALKI---EY  569 (810)
Q Consensus       495 ~~~e~~~l~~~~pi~vvGDiHG~~~~L~~~l~~~~~~~~~~~~--~~~~~vfLGDyvDrG~~s~e~l~ll~~lk~---~~  569 (810)
                      |..|+++++...+++|||||||++.+|.++|+..++++....|  ....+||||||||||++|.||+.+|++++.   ++
T Consensus        60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~  139 (342)
T 2z72_A           60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA  139 (342)
T ss_dssp             TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             03676355389978999789899999999999659995323446788789998987688879899999999988888637


Q ss_pred             CCCEEEECCCCCCCCHHHCC----CCHHHHHHHHCCCCCCCCCC---CCCCCCCCCCEEEEECCCEEEECCCCCCCCC--
Q ss_conf             99679933786200001102----88589998609887611122---1010024675069985938984188678654--
Q 003562          570 PENVHLIRGNHEAADINALF----GFRLECIERMGENDGIWAWT---RFNQLFNCLPLAALIEKKIICMHGGIGRSIH--  640 (810)
Q Consensus       570 P~~v~llrGNHE~~~~~~~~----gf~~e~~~~~~~~~~~~~~~---~~~~~f~~lPl~a~i~~~il~vHgGi~~~~~--  640 (810)
                      |.++++||||||.+.++..+    ..+......+... ...+|.   ...+||..||++++++ +++|||||++|.+.  
T Consensus       140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~  217 (342)
T 2z72_A          140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISR  217 (342)
T ss_dssp             TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHT
T ss_pred             CCEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHCCC-HHHHHHHHHHHHHHHHHCCEEEEEC-CEEEEECCCCHHHCCC
T ss_conf             8828999368757775173032454213699986655-7999987389999985098599989-9999977888211335


Q ss_pred             --CHHHHHCCCCCCCCCC----CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             --2544310258810499----9525443003899999978797769999940342999999999865970899802212
Q 003562          641 --SVEQIEKLERPITMDA----GSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVSDFCKRNKLQLIIRAHECV  714 (810)
Q Consensus       641 --~~~~i~~~~rp~~~~~----~~~~~~dllWsdp~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~~~~iir~H~~~  714 (810)
                        ++++|+.+.|+.....    .....+++||+||..     .|   .||.....||++++++||+.+++++|||||+++
T Consensus       218 ~~~l~~i~~~~r~~~~~~~~~~~~~~~~~~lwsd~~~-----~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~~  289 (342)
T 2z72_A          218 ELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGP-----TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTSQ  289 (342)
T ss_dssp             TCCHHHHHHHHHHHTTSCHHHHHHSHHHHHHHSTTST-----TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSCC
T ss_pred             CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC-----CC---CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             7999999987654025542243437778834189999-----87---677666057758899999777991999999700


Q ss_pred             CCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCC
Q ss_conf             35607953992899972578779889839999993862
Q 003562          715 MDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGL  752 (810)
Q Consensus       715 ~~G~~~~~~~~~itifSa~~y~~~~~n~~a~l~~~~~~  752 (810)
                      ++ +...+++++|||||+++|.    |.++++.++++.
T Consensus       290 ~~-~~~~~~~~~i~Idsg~~~g----g~la~l~i~~~~  322 (342)
T 2z72_A          290 ER-VLGLFHNKVIAVDSSIKVG----KSGELLLLENNR  322 (342)
T ss_dssp             SS-CEEETTTTEEECCCCGGGS----SCCCEEEEETTE
T ss_pred             CC-HHHHCCCCEEEEECCCCCC----CCEEEEEEECCE
T ss_conf             15-3301399899998889888----857999998997


No 10 
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=1.00  E-value=1  Score=281.07  Aligned_cols=262  Identities=18%  Similarity=0.219  Sum_probs=223.7

Q ss_pred             CEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCC
Q ss_conf             92997569994799668999996345427778799999997308999864748999922893189998625999986402
Q 003562            1 MMFSLENGPAGVCRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYG   80 (810)
Q Consensus         1 ~l~~~d~~~~~W~~l~~~~~~P~~R~~haa~~v~~~Iyv~GG~~~~~~~~~dv~~lDl~t~~~~W~~i~~~g~~P~~R~~   80 (810)
                      .+|.||+.+.+|+++.   .+|.+|.+|+++++++.||++||..  ....+++|+||+.+++  |..++.   .|.+|++
T Consensus        25 ~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~--W~~~~~---~p~~r~~   94 (306)
T 3ii7_A           25 SCRYFNPKDYSWTDIR---CPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDS--WYSKLG---PPTPRDS   94 (306)
T ss_dssp             SEEEEETTTTEEEECC---CCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTE--EEEEEC---CSSCCBS
T ss_pred             EEEEECCCCCCEECCC---CCCCCCCEEEEEEECCEEEEEECCC--CCCCCEEEEEECCCCE--EEECCC---CCCCCCC
T ss_conf             1898669889783078---8875456368999999999993889--9875337998279992--977898---8764321


Q ss_pred             CEEEEECCCEEEEECCCC-CCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCC---
Q ss_conf             589998991899990699-9987894899965899707999058999998563108999679499999312899996---
Q 003562           81 HVMDLVSQRYLVSVSGND-GKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP---  156 (810)
Q Consensus        81 Hs~~~v~~~~l~VfGG~~-g~~~~~dv~~yd~~~~~~~W~~i~~~g~~P~~R~~hsa~~~~~~~l~i~GG~~~~g~~---  156 (810)
                      |+++++++. +|++||.+ +...++++|+||+.++  +|+++..   +|.+|.+|++++. ++.+|++||.......   
T Consensus        95 ~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~  167 (306)
T 3ii7_A           95 LAACAAEGK-IYTSGGSEVGNSALYLFECYDTRTE--SWHTKPS---MLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRV  167 (306)
T ss_dssp             CEEEEETTE-EEEECCBBTTBSCCCCEEEEETTTT--EEEEECC---CSSCCBSCEEEEE-TTEEEEECCEESCTTTCEE
T ss_pred             EEEEEECCE-EEEECCCCCCCCEEEEEEEEECCCC--CEEECCC---CCCCCCEEEEEEE-CCEEEEECCCCCCCCCCCC
T ss_conf             069999999-9998988778847006999818999--5685899---7677615479998-9999998787899976621


Q ss_pred             CCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCC
Q ss_conf             23379999178880999838999999553217999899999984657998777788609999888880998346755788
Q 003562          157 LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSR  236 (810)
Q Consensus       157 ~~d~~~l~~~~~~~W~~i~~~g~~P~~R~~hsav~~~~~l~V~GG~~~~~~~~~~~~~i~~yd~~t~~W~~v~~~~~~~~  236 (810)
                      +++++.++.... +|+.+.   ..|.+|+.|+++.++++|||+||.....    ..+++++||+++++|+.+..+     
T Consensus       168 ~~~~~~yd~~~~-~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~-----  234 (306)
T 3ii7_A          168 LNSCEVYDPATE-TWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGLG----GLDNVEYYDIKLNEWKMVSPM-----  234 (306)
T ss_dssp             CCCEEEEETTTT-EEEEEC---CCSSCCBSCEEEEETTEEEEECCEETTE----EBCCEEEEETTTTEEEECCCC-----
T ss_pred             CCEEEEECCCCC-EEEECC---CCCCHHHCCEEEEECCEEEEEECCCCCC----CCCEEEEEECCCCCEEECCCC-----
T ss_conf             133898479989-277998---7633022626999999999995988898----776499962799968787889-----


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88999999998798863003999969999999489999887827998579986567898877899988867
Q 003562          237 TSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPFQSDVNSPLLTSERAPTHTG  307 (810)
Q Consensus       237 ~~~~~~~~~~~~~p~~R~~hs~~~~~~~I~I~GG~~~~~~l~D~~~~d~~~~~~~~~~~~~~~~~~~~~~~  307 (810)
                                   |.+|..|+++.++++|||+||.++...++++++||+.+.+|....+++  .++..++.
T Consensus       235 -------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~--~~r~~~~~  290 (306)
T 3ii7_A          235 -------------PWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR--AFPVTSCL  290 (306)
T ss_dssp             -------------SCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE--CCSCTTCE
T ss_pred             -------------CCCCCCEEEEEECCEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCC--CCCCEEEE
T ss_conf             -------------877662059998999999937679812124899758999178689766--65661489


Done!