BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003564
(810 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484307|ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 884
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/822 (60%), Positives = 601/822 (73%), Gaps = 44/822 (5%)
Query: 25 KPQSQCSNSFRSIRIGICFSHLTIQAQ-------LGTTRTKRKVKPSFFEQIRHKWSHKV 77
+PQ+ SN+FR+++ S+ +IQ L TT+ KRK +PSFFEQIR KWS K+
Sbjct: 17 QPQAHYSNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTTKAKRKPRPSFFEQIRDKWSLKI 76
Query: 78 ISPREKFPWQEEEEEEEEVQNE--PETDVESRVRSEPFSSALPNRFVSAPWIHGTDSKEI 135
SPREKFPWQE+ EE + P+++V P SSA +RFVS P IH + +
Sbjct: 77 NSPREKFPWQEQAEETQNSSGVVVPDSEVIDSSVGSPVSSASESRFVSVPCIHESKPRNP 136
Query: 136 KFDS-PQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVIELDKEGDYNKELKTDEVKI 194
+ S P+ + ++ + G GS H A ++ KE D + + + + V++
Sbjct: 137 RLVSEPEISQNSCEQGVNVVGF-GS------HRASVDEWSKSFQKEVDSDGKFEGEGVEV 189
Query: 195 DANPIELSKDRHREVG------SLNQK---------QIKGYHEVDDPSVLPWKRNT---- 235
D PI + E+ SLN+K +G+ LPWKR
Sbjct: 190 DEIPIGVLGTEKTEIEMGDANVSLNEKPPGGDEDFGNFEGFSGNSSLIELPWKRREGLQP 249
Query: 236 ---DRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDE 292
D R NT +AE+M+PEHEL+RL+NI+LRMLER KVG+AG+TQ+LVD+IHEKW+ DE
Sbjct: 250 VERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDE 309
Query: 293 VVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKH---- 348
VVKLKFE P S MKRTHEILE RTGGLVIWR+GSSVVL+RGMAYKL CVQS+ K
Sbjct: 310 VVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERDN 369
Query: 349 -NHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELG 407
N ++ +QD N +++++G ES + DSA L++LS+EELMDL ELN+LLDELG
Sbjct: 370 VNISEYSQDAANVIIQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLDELG 429
Query: 408 PRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHF 467
PRFKDW GREPLPVDADLLP VV +YKPP RLLPYG++ LR+ E T RRLAR PPHF
Sbjct: 430 PRFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMPPHF 489
Query: 468 ALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDY 527
ALGR+RELQGLA AMVKLWE+SAIAKIAIKR V NT N+RMAEELK LTGGTL+ RNKDY
Sbjct: 490 ALGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRNKDY 549
Query: 528 IVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLA 587
IVFYRGNDFLPP V +A+KER KL D++QDEEE+ARH ASALI+ KA+ G LVAGTLA
Sbjct: 550 IVFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALIDSKARSAKGPLVAGTLA 609
Query: 588 ETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQE 647
ETLAATSRWG +PS EDV KM+RDS L+RHASL+RY+ +KLA AK KLK +KAL KVQE
Sbjct: 610 ETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRKVQE 669
Query: 648 SLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKI 707
L+PAELP DLET+++EERFL RK+GLSMKP+LLLG RGI+DGT+ENMHLHWKYRELVKI
Sbjct: 670 DLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKI 729
Query: 708 IVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRR 767
IVKGK+FAQVK IAISLEAESGGVLVS+D+TPKG AIIVYRGKNY RP LRP+NLLT+R
Sbjct: 730 IVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKR 789
Query: 768 QALARSVELQRREGLKHHILDLQERIELVKSELEEIEGGKTM 809
QALARS+ELQR E LKHHI DL+ERI+L+KS EE++ G +
Sbjct: 790 QALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGI 831
>gi|297738658|emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/828 (60%), Positives = 598/828 (72%), Gaps = 58/828 (7%)
Query: 3 HVVVLQAKYSPLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQ-------LGTT 55
H+ V+ A SP +L L+PQ+ SN+FR+++ S+ +IQ L TT
Sbjct: 38 HLSVVMA-LSPSPSNLHLHLLLQPQAHYSNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTT 96
Query: 56 RTKRKVKPSFFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE--PETDVESRVRSEPF 113
+ KRK +PSFFEQIR KWS K+ SPREKFPWQE+ EE + P+++V P
Sbjct: 97 KAKRKPRPSFFEQIRDKWSLKINSPREKFPWQEQAEETQNSSGVVVPDSEVIDSSVGSPV 156
Query: 114 SSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKT 173
SSA +RFVS P IH E K +P ++ ++ E + V KT
Sbjct: 157 SSASESRFVSVPCIH-----ESKPRNP--RLVSEPE----------ISQNSCEQGVNVKT 199
Query: 174 VIELDKEGDYNKELKTDEVKIDANPIELSKDRHREVGSLNQKQIKGYHEVDDPSVLPWKR 233
IE+ GD N V ++ P G + +G+ LPWKR
Sbjct: 200 EIEM---GDAN-------VSLNEKP---------PGGDEDFGNFEGFSGNSSLIELPWKR 240
Query: 234 NT-------DRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHE 286
D R NT +AE+M+PEHEL+RL+NI+LRMLER KVG+AG+TQ+LVD+IHE
Sbjct: 241 REGLQPVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHE 300
Query: 287 KWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFT 346
KW+ DEVVKLKFE P S MKRTHEILE RTGGLVIWR+GSSVVL+RGMAYKL CVQS+
Sbjct: 301 KWRKDEVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYI 360
Query: 347 KH-----NHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNY 401
K N ++ +QD N +++++G ES + DSA L++LS+EELMDL ELN+
Sbjct: 361 KQERDNVNISEYSQDAANVIIQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNH 420
Query: 402 LLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLAR 461
LLDELGPRFKDW GREPLPVDADLLP VV +YKPP RLLPYG++ LR+ E T RRLAR
Sbjct: 421 LLDELGPRFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLAR 480
Query: 462 KTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLL 521
PPHFALGR+RELQGLA AMVKLWE+SAIAKIAIKR V NT N+RMAEELK LTGGTL+
Sbjct: 481 TMPPHFALGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLV 540
Query: 522 CRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSL 581
RNKDYIVFYRGNDFLPP V +A+KER KL D++QDEEE+ARH ASALI+ KA+ G L
Sbjct: 541 SRNKDYIVFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALIDSKARSAKGPL 600
Query: 582 VAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKA 641
VAGTLAETLAATSRWG +PS EDV KM+RDS L+RHASL+RY+ +KLA AK KLK +KA
Sbjct: 601 VAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKA 660
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
L KVQE L+PAELP DLET+++EERFL RK+GLSMKP+LLLG RGI+DGT+ENMHLHWKY
Sbjct: 661 LRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKY 720
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
RELVKIIVKGK+FAQVK IAISLEAESGGVLVS+D+TPKG AIIVYRGKNY RP LRP+
Sbjct: 721 RELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPK 780
Query: 762 NLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIEGGKTM 809
NLLT+RQALARS+ELQR E LKHHI DL+ERI+L+KS EE++ G +
Sbjct: 781 NLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGI 828
>gi|255546121|ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical protein [Ricinus communis]
Length = 930
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/846 (56%), Positives = 593/846 (70%), Gaps = 60/846 (7%)
Query: 23 PLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPSFFEQIRHKWSHKVISPRE 82
PL Q++ + F++ S+ + Q+ T+TKRK +PSFFEQIR KWS KV S R+
Sbjct: 46 PLFLQARSHSPFKAFNFETNCSY-SRSIQVSATKTKRKPRPSFFEQIRDKWSLKVPSTRD 104
Query: 83 KFPW---------------QEEEEEEEEVQ----NEPETDVE-SRVRSEPFSSALPNRFV 122
FPW EEE E E+ ++ E D S + + S +LPN
Sbjct: 105 TFPWQEPEQQQEHQGQGKNDEEEIERCEISGVTLSKAEIDANPSSIDDDSVSVSLPNHLT 164
Query: 123 SAPWIHGTDSKEIKFDS-PQTKITTKKEDIGDD-GLLGSFEKTVVHS--AVKEKTVIELD 178
+APW+HGT K+ F S P+ + D+ ++ + EK V + KE ++ +D
Sbjct: 165 TAPWVHGTRPKKNHFSSRPKIGENVVQNDVHTVVDIVENLEKEVTCNDKFKKEDNILHVD 224
Query: 179 ------KEGDYNKELKTDEVKIDANPIELSKDRH-------REVGSLNQKQIK---GYH- 221
KE +Y+K+ K +V++ +EL +D + +N+K GY
Sbjct: 225 NAERLVKEVNYDKKFKEAKVQVGGFSVELKRDNEIARAKYSKSPSYINEKPFGANGGYGV 284
Query: 222 --EVDDPSV---LPWKR--------NTDRRRRSNTELAEKMIPEHELQRLRNISLRMLER 268
DD S LPW++ R +RSNTELAE+M+PEHEL+RLRN++LRM ER
Sbjct: 285 QVSYDDNSSSIELPWEKERVMESVEGYLRGKRSNTELAERMLPEHELKRLRNVALRMYER 344
Query: 269 TKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSS 328
KVG+AGI Q LVD++HEKW+LDEVVKLKFEEP S M+RTHEILE RTGGLVIWRSGSS
Sbjct: 345 IKVGAAGINQDLVDAVHEKWRLDEVVKLKFEEPLSFNMRRTHEILENRTGGLVIWRSGSS 404
Query: 329 VVLFRGMAYKLPCVQSFTKHNHTQQT-----QDVTNEVMRNVGEHPPRSAMESYVPDSAN 383
VVL+RG++YKL CV+SF+K + + ++VT+ N+G ESY+PD A
Sbjct: 405 VVLYRGISYKLHCVRSFSKQDEAGKEILAHPEEVTSNATLNIGVKHFIGTTESYIPDRAK 464
Query: 384 NLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYG 443
L++LS+EEL D ELN LDELGPRF+DW GREPLPVDADLL V P YKPP RLLPYG
Sbjct: 465 YLKDLSREELTDFTELNQFLDELGPRFEDWCGREPLPVDADLLLAVDPGYKPPFRLLPYG 524
Query: 444 IKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 503
++ L D E T FRRLAR PPHFALGRNR+LQGLAKA+VKLWE+SAI KIAIKR V NT
Sbjct: 525 VRHCLTDKEMTIFRRLARTVPPHFALGRNRQLQGLAKAIVKLWERSAIVKIAIKRGVQNT 584
Query: 504 RNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERAR 563
RNERMAEELK LTGG LL RNK+YIVFYRGNDFLPP + +KER KLT ++QDEEE+AR
Sbjct: 585 RNERMAEELKVLTGGILLSRNKEYIVFYRGNDFLPPAIVKTLKERKKLTYLKQDEEEQAR 644
Query: 564 HVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY 623
+A A +E AK LVAGTLAET+AATS W Q D+++M+R++ L++ ASL+++
Sbjct: 645 QMALASVESSAKTSKVPLVAGTLAETVAATSHWRDQRGSPDIDEMLREAVLAKRASLVKH 704
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
LE KLALAK KL+ A+KALAKV E LDP+ LP+DLETI++EERFL RK+GLSMKPYL LG
Sbjct: 705 LENKLALAKGKLRKAEKALAKVHEHLDPSGLPTDLETISDEERFLFRKIGLSMKPYLFLG 764
Query: 684 RRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIA 743
+RG+YDGTIENMHLHWKYRELVK+IV+GKSFAQVK IAISLEAESGGVLVS+++T KG A
Sbjct: 765 KRGVYDGTIENMHLHWKYRELVKVIVRGKSFAQVKHIAISLEAESGGVLVSIERTTKGYA 824
Query: 744 IIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEI 803
IIVYRGKNY+ P +RP+NLLT+RQAL RS+ELQRRE LKHHI DLQERIEL+K ELE++
Sbjct: 825 IIVYRGKNYLHPEVMRPKNLLTKRQALVRSIELQRREALKHHISDLQERIELLKLELEDM 884
Query: 804 EGGKTM 809
E GK +
Sbjct: 885 ESGKEI 890
>gi|224091282|ref|XP_002309217.1| predicted protein [Populus trichocarpa]
gi|222855193|gb|EEE92740.1| predicted protein [Populus trichocarpa]
Length = 977
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/714 (62%), Positives = 527/714 (73%), Gaps = 49/714 (6%)
Query: 138 DSPQTKITTKKEDIGD--DGLLGSFEKTVVHSAV-----KEKTVIELDKEGDYNKELKTD 190
DS + + KKE +G + L F+ +++V KEK+++ D N +
Sbjct: 218 DSREDNVANKKESVGKKINCNLNKFKDKHYYNSVELPGDKEKSIVT-----DLNDVVSLT 272
Query: 191 EVKIDANP-----IELSKDRHRE------------VGSLNQKQIKGYHEVD-------DP 226
E D + IE+ D H + V S+ +KQ+ + V+ +
Sbjct: 273 EKPFDGDDGDFGNIEVCNDGHCDSFENLSCKDSNGVVSVTKKQLGDFENVEVSNNGVSNS 332
Query: 227 SVLPWKRNTD--------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQ 278
+ LPWKR + R++SNT+LAE+M+PEHEL+RLRN++LRMLER KVG+ GITQ
Sbjct: 333 NELPWKRTSGLDSLGEDKSRKKSNTDLAERMLPEHELKRLRNVALRMLERIKVGATGITQ 392
Query: 279 ALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYK 338
LVD+IHEKWKLDEVVKLKFE P S MKRTHEILE RTGGL+IWRSGSSVV++RG YK
Sbjct: 393 DLVDAIHEKWKLDEVVKLKFEWPLSCNMKRTHEILESRTGGLIIWRSGSSVVMYRGTTYK 452
Query: 339 LPCVQSFTKHNHT-----QQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEEL 393
CVQS+TK N Q ++ TN + G MES +PD+A L++LS+EEL
Sbjct: 453 FQCVQSYTKQNEAGMDVLQYAEEATNSATSSAGMKDLARTMESIIPDAAKYLKDLSQEEL 512
Query: 394 MDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCET 453
MD ELN+LLDELGPR+KDW GREPLPVDADLLP VVP YK PLRLLPYG+KP L + T
Sbjct: 513 MDFSELNHLLDELGPRYKDWCGREPLPVDADLLPAVVPGYKSPLRLLPYGVKPCLSNKNT 572
Query: 454 TEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELK 513
T FRRLAR TPPHF LGRNRELQGLA AMVKLWE+SAIAKIAIKR V TRNE MAEELK
Sbjct: 573 TNFRRLARTTPPHFVLGRNRELQGLANAMVKLWERSAIAKIAIKRGVQYTRNEIMAEELK 632
Query: 514 KLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELK 573
+LTGGTLL RNK+YIVFYRGNDFLPPV+ + +KER KL + QDEE++AR + SA I
Sbjct: 633 RLTGGTLLSRNKEYIVFYRGNDFLPPVINETLKERRKLAFLYQDEEDQARQMTSAFIGSS 692
Query: 574 AKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKR 633
K G LVAGTL ET+AA SRWG QPS EDVE+M+RDS L+RHASL+++LE KLA AK
Sbjct: 693 VKTTKGPLVAGTLVETVAAISRWGNQPSSEDVEEMIRDSALARHASLVKHLENKLAQAKG 752
Query: 634 KLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIE 693
KLK ++K LAKVQE+L+P ELP+DLETI++EERFL RK+GLSMKPYL LGRRG++DGTIE
Sbjct: 753 KLKKSEKDLAKVQENLEPTELPTDLETISDEERFLFRKIGLSMKPYLFLGRRGVFDGTIE 812
Query: 694 NMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYV 753
NMHLHWKYRELVKIIV+ K AQVK IAISLEAESGGVLVS+D+T KG AIIVYRGKNY+
Sbjct: 813 NMHLHWKYRELVKIIVERKGIAQVKHIAISLEAESGGVLVSVDRTTKGYAIIVYRGKNYM 872
Query: 754 RPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIEGGK 807
RP +RP+NLLTRRQALARSVELQR E LKHHI DLQERIELV SELEE+E K
Sbjct: 873 RPQAMRPENLLTRRQALARSVELQRYEALKHHITDLQERIELVTSELEEMEADK 926
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 25/185 (13%)
Query: 22 LPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPSFFEQIRHKWSHKVISPR 81
L L+PQ+ +F+ C S+ T+Q ++KRK KPSFFEQI HKWS K+ S R
Sbjct: 15 LLLQPQNPSPITFKFTTY--CPSNRTVQVH--AAKSKRKPKPSFFEQIHHKWSLKLTSTR 70
Query: 82 EKFPWQEEEEEEEEVQNEPETDVESRVR--------SEPFSSALPNRFVSAPWIHGTDSK 133
+KFPWQE+E+++++ Q E E + E ++ S+ S LPNR + PWIHG K
Sbjct: 71 DKFPWQEQEQQQQQQQEEEEEEEEEDIKEVDAVPSVSDTVSFNLPNRLTTPPWIHGATPK 130
Query: 134 EIKFDSPQTKITTKKEDIGDDGLLGSFEK---TVVHSAVKEKTVIELDKEGDYNKELKTD 190
+ FD K GD+ + G FE VV+ + ++ IE KE + + K
Sbjct: 131 QAHFDYQPRK--------GDNSIHGVFENREDNVVNGVIDKEERIE--KEVNLDNNFKEQ 180
Query: 191 EVKID 195
V D
Sbjct: 181 VVDFD 185
>gi|449452735|ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 846
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/832 (55%), Positives = 579/832 (69%), Gaps = 70/832 (8%)
Query: 18 AVHYLPLKPQSQCSNSFRSI------RIGICFSHLTIQAQLGTTRTKRKVKPSFFEQIRH 71
++ + P + + CSN+ + RI + F + KRK +PSF EQIRH
Sbjct: 38 SIIFTPQRFKIHCSNNTIQVETQPPRRIRVDFE----------VKKKRKPRPSFLEQIRH 87
Query: 72 KWSHKVISPREKFPWQEEEEEEEEVQNEP---------------ETDVESRVRSEPFSSA 116
KWS K IS FPWQ++E++ Q+E +T V + + A
Sbjct: 88 KWSTKPISSTHTFPWQQQEQDRHHKQDEGEGEEEEEEEEEQVANQTSVSIPESTTDVTQA 147
Query: 117 LP-NRFVSAPWIHGTDSKEIKFD----SPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKE 171
+P R +SAPW HG+ S+ +FD +P ++ + I D ++ +
Sbjct: 148 VPITRSISAPWAHGSQSRNTQFDFKPKTPNGEVINEISKISTDD-----------TSNRN 196
Query: 172 KTVIELDKEGDYNKELKTDEVKIDANPIELSKDRHREVGSLNQKQIKGYHEVDDPSV--- 228
+ I +D+ D + E DE +ID + +++ R +L++K + +D +
Sbjct: 197 ASTISIDEISDDSSE---DEAEIDTVVLPVTEKR----STLSKKIVHSVSSDNDDNGRVD 249
Query: 229 LPWKRNTDR-------RRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALV 281
LPWKR R +RRS T LAE+M+PEHEL+RLRNISLRM+ER +VG GITQ L+
Sbjct: 250 LPWKREPRRDSEVDAGQRRSKTLLAEQMLPEHELRRLRNISLRMVERIEVGVKGITQELL 309
Query: 282 DSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC 341
DSIHEKWK+DEVVKLKFE P ++ MKR HE LE RTGGLVIWRSGS +VL+RGM Y LPC
Sbjct: 310 DSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLYRGMTYHLPC 369
Query: 342 VQSFTKHNHTQ-QTQDVTN-----EVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMD 395
VQS+ K N + T DV N ++ RN H M + V ++ + + LSK+ELM+
Sbjct: 370 VQSYAKQNQAKSNTLDVPNNVESDDITRNEKLHTTVGTMSTIVSGASKHTKTLSKKELME 429
Query: 396 LCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTE 455
L +LN+LLDE+GPRFKDW G EP+PVDADLLP +VP YKPP R+LPYG++ LR+ E T
Sbjct: 430 LSDLNHLLDEIGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILPYGVRHCLRNKEVTI 489
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
FRRLARK PPHFALGRNR+LQGLA AMVKLWEK AIAKIAIKR V NTRNERMAEEL+ L
Sbjct: 490 FRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMAEELRIL 549
Query: 516 TGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAK 575
TGGTLL RNK+YIVFYRGND+LPP +T+A+KER KL D +QD EE+ R VASA IE K K
Sbjct: 550 TGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKLADRQQDVEEQVRQVASAAIESKVK 609
Query: 576 GFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKL 635
LVAGTL ET+AATSRWG QPS D+E M DS L++ SL+ YL++KLALAK K+
Sbjct: 610 ASNAPLVAGTLTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALAKCKV 669
Query: 636 KMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENM 695
K A+K +AK+QE +P++LP+DLETIT+EER L RK+GLSMKPYLLLGRRG+YDGT+ENM
Sbjct: 670 KNAEKIIAKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENM 729
Query: 696 HLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
HLHWK+RELVKIIV+GK+ QVK +AISLEAES GV++SLDKT KG +IVYRGKNY RP
Sbjct: 730 HLHWKFRELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRP 789
Query: 756 LKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIEGGK 807
+RP+N+LTRRQALARS+ELQRRE LKHHILDL+E+IEL+K+ELEE + GK
Sbjct: 790 DAMRPKNMLTRRQALARSIELQRREALKHHILDLEEKIELLKAELEERKSGK 841
>gi|449529423|ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like, partial [Cucumis sativus]
Length = 789
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/788 (57%), Positives = 564/788 (71%), Gaps = 54/788 (6%)
Query: 56 RTKRKVKPSFFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNEP--------------- 100
+ KRK +PSF EQIRHKWS K IS FPWQ++E++ Q+E
Sbjct: 15 KKKRKPRPSFLEQIRHKWSTKPISSTHTFPWQQQEQDRHHKQDEGEGEEEEEEEEEQVAN 74
Query: 101 ETDVESRVRSEPFSSALP-NRFVSAPWIHGTDSKEIKFD----SPQTKITTKKEDIGDDG 155
+T V + + A+P R +SAPW HG+ S+ +FD +P ++ + I D
Sbjct: 75 QTSVSIPESTTDVTQAVPITRSISAPWAHGSQSRNTQFDFKPKTPNGEVINEISKISTDD 134
Query: 156 LLGSFEKTVVHSAVKEKTVIELDKEGDYNKELKTDEVKIDANPIELSKDRHREVGSLNQK 215
++ + + I +D+ D + E DE +ID + +++ R +L++K
Sbjct: 135 -----------TSNRNASTISIDEISDDSSE---DEAEIDTVVLPVTEKR----STLSKK 176
Query: 216 QIKGYHEVDDPSV---LPWKRNTDR-------RRRSNTELAEKMIPEHELQRLRNISLRM 265
+ +D + LPWKR R +RRS T LAE+M+PEHEL+RLRNISLRM
Sbjct: 177 IVHSVSSDNDDNGRVDLPWKREPRRDSEVDAGQRRSKTLLAEQMLPEHELRRLRNISLRM 236
Query: 266 LERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRS 325
+ER +VG GITQ L+DSIHEKWK+DEVVKLKFE P ++ MKR HE LE RTGGLVIWRS
Sbjct: 237 VERIEVGVKGITQELLDSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRS 296
Query: 326 GSSVVLFRGMAYKLPCVQSFTKHNHTQ-QTQDVTN-----EVMRNVGEHPPRSAMESYVP 379
GS +VL+RGM Y LPCVQS+ K N + T DV N ++ RN H M + V
Sbjct: 297 GSLIVLYRGMTYHLPCVQSYAKQNQAKSNTLDVPNNVESDDITRNEKLHTTVGTMSTIVS 356
Query: 380 DSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRL 439
++ + + LSK+ELM+L +LN+LLDE+GPRFKDW G EP+PVDADLLP +VP YKPP R+
Sbjct: 357 GASKHTKTLSKKELMELSDLNHLLDEIGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRI 416
Query: 440 LPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRD 499
LPYG++ LR+ E T FRRLARK PPHFALGRNR+LQGLA AMVKLWEK AIAKIAIKR
Sbjct: 417 LPYGVRHCLRNKEVTIFRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRG 476
Query: 500 VMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEE 559
V NTRNERMAEEL+ LTGGTLL RNK+YIVFYRGND+LPP +T+A+KER KL D +QD E
Sbjct: 477 VENTRNERMAEELRILTGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKLADRQQDVE 536
Query: 560 ERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHAS 619
E+ R VASA IE K K LVAGTL ET+AATSRWG QPS D+E M DS L++ S
Sbjct: 537 EQVRQVASAAIESKVKASNAPLVAGTLTETIAATSRWGSQPSGHDIENMREDSALAKLDS 596
Query: 620 LLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPY 679
L+ YL++KLALAK K+K A+K +AK+QE +P++LP+DLETIT+EER L RK+GLSMKPY
Sbjct: 597 LIEYLKKKLALAKCKVKNAEKIIAKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKPY 656
Query: 680 LLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTP 739
LLLGRRG+YDGT+ENMHLHWK+RELVKIIV+GK+ QVK +AISLEAES GV++SLDKT
Sbjct: 657 LLLGRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKTT 716
Query: 740 KGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSE 799
KG +IVYRGKNY RP +RP+N+LTRRQALARS+ELQRRE LKHHILDL+E+IEL+K+E
Sbjct: 717 KGYEVIVYRGKNYTRPDAMRPKNMLTRRQALARSIELQRREALKHHILDLEEKIELLKAE 776
Query: 800 LEEIEGGK 807
LEE + GK
Sbjct: 777 LEERKSGK 784
>gi|356564786|ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 794
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/585 (65%), Positives = 464/585 (79%), Gaps = 18/585 (3%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
++RRSNTELAE+ IPEHEL+RLR I+LRM+ER VG GITQ LV S+H+KW+ EVVK
Sbjct: 188 KKRRSNTELAERTIPEHELRRLRKIALRMMERFDVGVKGITQELVASVHQKWRDAEVVKF 247
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHN------- 349
KF P S MK+ H+ILE + GG+VIWRSGSS+VL+RGMAYKLPC++++ K N
Sbjct: 248 KFGIPLSAHMKKAHQILESKIGGIVIWRSGSSIVLYRGMAYKLPCIENYKKVNLAKENAV 307
Query: 350 ----HTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDE 405
H D V VG ES + +SA L+++S+EELM++C+LN+LLDE
Sbjct: 308 DHSLHVGNGSDGQASVNETVG------TAESVIQESAEYLKDMSEEELMEMCDLNHLLDE 361
Query: 406 LGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPP 465
LGPRFKDW GR+PLPVDADLLP VVP YK P RLLPY I+P L + E T FRRLAR T P
Sbjct: 362 LGPRFKDWTGRQPLPVDADLLPAVVPGYKTPFRLLPYRIRPCLTNKEMTNFRRLARTTAP 421
Query: 466 HFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNK 525
HFALGRNRELQGLA+AMVKLWE SAIAKIAIKR V NT N+RMAEEL+KLTGGTLL RNK
Sbjct: 422 HFALGRNRELQGLARAMVKLWETSAIAKIAIKRGVPNTCNDRMAEELRKLTGGTLLSRNK 481
Query: 526 DYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGT 585
+YIVFYRGNDFLPPVVT+ + ER KLT ++QDEE++AR +AS++ +K L+AGT
Sbjct: 482 EYIVFYRGNDFLPPVVTNTLNERQKLTLLQQDEEDKARQIASSITVSNSKAAQVPLIAGT 541
Query: 586 LAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKV 645
L ET AAT+ WG QPS +++E M+RDS +++ ++L+++ E+KLALAK K + A+KALAKV
Sbjct: 542 LTETRAATTNWGHQPSKQEIENMIRDSAMNKLSALVKHHEKKLALAKSKFRKAEKALAKV 601
Query: 646 QESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELV 705
Q LDPA++PSDLET+TNEERFL RK+GLSMKPYLLLGRR +Y GTIENMHLHWKYRELV
Sbjct: 602 QRDLDPADIPSDLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELV 661
Query: 706 KIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG-IAIIVYRGKNYVRPLKLRPQNLL 764
K+IVKG++ AQVK I+ISLEAESGGVLVS+DK +G IIVYRGKNY P +RP+NLL
Sbjct: 662 KLIVKGRNSAQVKHISISLEAESGGVLVSVDKDTRGHHTIIVYRGKNYFSPRVVRPKNLL 721
Query: 765 TRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIEGGKTM 809
TRRQALARSVELQRRE LKHHI DL+ERI L+KSELE+++ GK +
Sbjct: 722 TRRQALARSVELQRREALKHHISDLEERIGLLKSELEDMKNGKEI 766
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 62 KPSFFEQIRHKWSHKVISPREKFPWQEEE 90
+PSF QI+ KWS K+ S REKFPWQE++
Sbjct: 55 RPSFLHQIQDKWSLKLGSQREKFPWQEQK 83
>gi|334187011|ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|332660271|gb|AEE85671.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 841
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/759 (53%), Positives = 521/759 (68%), Gaps = 82/759 (10%)
Query: 65 FFEQIRHKWSHKVISPREKFPWQEEEEE--------------------EEEVQNEPETDV 104
FFE+I KWS ++ EK PWQ++EE+ ++ TD
Sbjct: 83 FFEEISDKWSSRISPKTEKLPWQKQEEQIQHHEDEEDEEGDESSSNLSSGNGLSDKRTD- 141
Query: 105 ESRVRS--EPFSSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEK 162
+R+ S EP+S P+ ++SAPW++ SK + F + S E+
Sbjct: 142 SNRLYSANEPWSFPRPSGYMSAPWVNNGGSKGVNFTT-------------------SSEQ 182
Query: 163 TVVHSAVKEKTVIELDKEGDYNKELKTDEVKIDANPIELSKDRHREVGSLNQKQIKGYHE 222
+ S+ + T ++ Y ++ + + +D++ L + S N K I
Sbjct: 183 GIQSSSFHDVTTVD-----RYRRDNDSSDRAVDSD---LDDGERGMIDSGNNKGI----- 229
Query: 223 VDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVD 282
W R R+SNT AE+++PEHEL+RLRN++LRM+ER KVGSAGITQALV+
Sbjct: 230 --------W-----RTRKSNTVEAERIVPEHELKRLRNVALRMVERVKVGSAGITQALVE 276
Query: 283 SIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCV 342
+IHEKW++DEVVKLKF EP+SL MKRTHE+LE++TGGLVIWRSGSSVVL+RG++YKL CV
Sbjct: 277 AIHEKWEVDEVVKLKFSEPYSLNMKRTHEVLEKKTGGLVIWRSGSSVVLYRGISYKLKCV 336
Query: 343 QSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYL 402
Q+F K N+ + E+ R+V YV + N +N+ KE+L +LCELN L
Sbjct: 337 QTFIKQNNLE----ANPEIHRSV-------EARDYVQEDGNYPKNVPKEQLSELCELNDL 385
Query: 403 LDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARK 462
LDE+GPRF DW G P PVDADLLP V Y+ P R+LP G+KP L + E TE RRLAR
Sbjct: 386 LDEVGPRFHDWTGCAPFPVDADLLPGYVEGYRCPFRILPQGVKPCLSNTEMTEMRRLART 445
Query: 463 TPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLC 522
+PPHFALGR+RELQGLAKAMVKLW KSAIAKIAIKR V NTRNERMAEELK+LT G L+
Sbjct: 446 SPPHFALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNERMAEELKRLTRGVLVS 505
Query: 523 RNKDYIVFYRGNDFLPPVVTDAVKERSK-LTDIRQDEEERARHVAS--ALIELKAKGFVG 579
RNK+YIVFYRGNDF+PP V +A+ ER K +T++ Q +E++AR +AS A + +AK
Sbjct: 506 RNKEYIVFYRGNDFMPPAVAEALTERQKEITEVLQAKEDQAREMASTRATLTSQAKSPKT 565
Query: 580 SLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMAD 639
L+AGTLAET+AA+SRW S D+E++ R+S + A+L+R LE +L K+KL+ A+
Sbjct: 566 QLLAGTLAETIAASSRWAPNASSVDIEELKRESASIKRAALIRDLELRLLYGKQKLRRAE 625
Query: 640 KALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHW 699
+ LAKVQ+ LDP+ELP+D E IT EER L RK+GLSM P+LLLGRR +YDGTIENMHLHW
Sbjct: 626 RDLAKVQKDLDPSELPTDSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHW 685
Query: 700 KYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLR 759
K+RELVK+IV+GKS QVK IAISLEAESGGVLVS+DKT KG AII+YRGKNY P +LR
Sbjct: 686 KHRELVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFRLR 745
Query: 760 PQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKS 798
P NLLTR++A ARS+ELQRRE LK+H+ DL+ERIEL+K+
Sbjct: 746 PSNLLTRKKAFARSIELQRREALKYHVADLEERIELLKT 784
>gi|242044486|ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
gi|241923491|gb|EER96635.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
Length = 962
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/735 (52%), Positives = 489/735 (66%), Gaps = 59/735 (8%)
Query: 114 SSALPNRFVSAPWIHGTDSKEIKFDSP--QTKITTKKEDIGDDGLLGSFEKTVVHSAVKE 171
S L ++ VSAPWIHG +S + P + + D+ DD L S E ++
Sbjct: 180 SYLLGSQPVSAPWIHGEESTSDRVSGPVAEGEEGMDMSDVSDDEL--SLED-------RD 230
Query: 172 KTVIELDKE---GDYNKELKTDEVKIDANP---IELSKDRHREVGSLNQ----------- 214
K I+ +E G ++L D N ++LS DR G ++
Sbjct: 231 KEEIDDGEELPTGSSEEQLYDDYATPTVNSSYEVDLSADRDSYGGRFDRSMRQGSVNTIV 290
Query: 215 KQIKGYHEVDDPS------------------VLPWKRNTDRR---------RRSNTELAE 247
K ++G E DP+ +LPW+R + RRSNTELAE
Sbjct: 291 KTLRGSMEESDPNAAIELSNAEDFVQKLGPVLLPWEREEEDDEAFSGGRVGRRSNTELAE 350
Query: 248 KMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMK 307
+ IPE EL+RLR+ +LRM ER KVG G+TQ +V+SIH KWK+DEVVK++FE P SL MK
Sbjct: 351 RTIPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMK 410
Query: 308 RTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGE 367
RTH++LE RTGG+VIWRSG SVVL+RGM Y L CVQS+ K T ++V ++ V
Sbjct: 411 RTHDLLEDRTGGVVIWRSGRSVVLYRGMNYNLQCVQSYAKSIETDSGKEV-DDASSAVSS 469
Query: 368 HPPRSAMESYVPDSA--NNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADL 425
H + +S + + EN S E + +++ LD+LGPR++DW GR P+PVDADL
Sbjct: 470 HGGHNLQDSREAGAKRLTSTENFSLES-SETFDIDNFLDQLGPRYRDWSGRGPVPVDADL 528
Query: 426 LPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKL 485
LP VV YKPP R+LPY IK LRD E T RRL+R+T PHFALGRNRE QGLA AMVKL
Sbjct: 529 LPGVVHGYKPPFRVLPYKIKSTLRDKEMTTLRRLSRQTAPHFALGRNREHQGLAAAMVKL 588
Query: 486 WEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAV 545
WEKSAIAKIAIKR V NT N+RMAEE+KKLTGG LL RNK+YIVFYRGNDF+ P V +
Sbjct: 589 WEKSAIAKIAIKRGVPNTCNDRMAEEIKKLTGGVLLSRNKEYIVFYRGNDFIAPKVRQVL 648
Query: 546 KERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDV 605
E+ + +QDEEE AR ASA I KG G LVAGTL ET A SRWG + +
Sbjct: 649 VEKQEQAITQQDEEELARLKASASIITVPKGIKGPLVAGTLTETTEAKSRWGMSLNDKQR 708
Query: 606 EKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEE 665
E+ M+ +L +H SLL+ L++KL LAK K+ A++ALAKVQE L PAELP+DLET+T+EE
Sbjct: 709 EEEMKRLSLLKHTSLLKNLKRKLILAKTKVAKAERALAKVQEFLSPAELPTDLETVTDEE 768
Query: 666 RFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLE 725
RFL R++GL M+ +L+LGRR ++DGT++NMHLHWK+RELVKIIV+GKSFAQVK IAISLE
Sbjct: 769 RFLFRRIGLKMRAFLMLGRREVFDGTVQNMHLHWKHRELVKIIVRGKSFAQVKHIAISLE 828
Query: 726 AESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHH 785
AES GVL+SLDKT KG AII YRGKNY RP ++P+NLLTRRQALARS+ELQRRE LKHH
Sbjct: 829 AESEGVLISLDKTSKGYAIIFYRGKNYRRPQIMKPRNLLTRRQALARSIELQRREALKHH 888
Query: 786 ILDLQERIELVKSEL 800
I LQ +I ++S+L
Sbjct: 889 ISSLQGKIWKLQSQL 903
>gi|115478793|ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|48716728|dbj|BAD23409.1| putative CRS1 [Oryza sativa Japonica Group]
gi|50726191|dbj|BAD33710.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113631223|dbj|BAF24904.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|125591023|gb|EAZ31373.1| hypothetical protein OsJ_15500 [Oryza sativa Japonica Group]
Length = 947
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/731 (51%), Positives = 493/731 (67%), Gaps = 49/731 (6%)
Query: 109 RSEPFSSALPNRFVSAPWIHGTDSKEIKFDSPQT-KITTKKEDIGDDGLL---------- 157
R EP S L +R VSAPW+HG + P T ++ + +E + DG
Sbjct: 170 RPEP-SFLLGSRPVSAPWMHGEEE-------PMTNQLVSDEEGLDGDGASEDEMGLVDGD 221
Query: 158 -------------------GSFEKTVVHSAVKEKTVIE-----LDKEGDYNKELKTDEVK 193
G F + A ++++ + G + + + V
Sbjct: 222 GDEDEDLGSEEETLSESSDGEFSEDYAAPAANSSSMMDSVLDHVSSGGGFYRGTRRSSVN 281
Query: 194 IDANPIELSKDRHREVGSLNQKQIKGYHEVDDPSVLPWKR--NTDR-RRRSNTELAEKMI 250
N + S + ++ + + + + P +LPW+R + DR R+RSNTELAE+ I
Sbjct: 282 SIVNTMRNSMEESSRNAAIECPETEDFVQKLGPVLLPWEREGDVDRPRKRSNTELAERTI 341
Query: 251 PEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTH 310
PEHEL+RLR+++LRM ER +VG G+TQ +V+SIH+KW+++EVVKL+FE P SL MKRTH
Sbjct: 342 PEHELRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTH 401
Query: 311 EILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVG-EHP 369
+ILE RTGG+VIWRSG SVVL+RGM Y L CVQS+T+ + V++ + + EH
Sbjct: 402 DILEERTGGIVIWRSGRSVVLYRGMNYNLRCVQSYTQTTEVNFDKRVSSNSVEPIHVEHK 461
Query: 370 PRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPV 429
+ + + SA + S E+ + +++ LD+LGPR+KDW GR P+PVDADLLP V
Sbjct: 462 FQKSGADGLNRSAYIVN--SSEKPTETFDIDSFLDQLGPRYKDWSGRGPIPVDADLLPGV 519
Query: 430 VPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKS 489
VP YK P RLLPY +K LR+ E T RRLAR+T PHFALGRNRE QGLA A+VKLWEKS
Sbjct: 520 VPGYKTPFRLLPYMVKSTLRNKEMTALRRLARQTAPHFALGRNREHQGLATAIVKLWEKS 579
Query: 490 AIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERS 549
+IAKIAIKR V NT N+RMAEE++KLTGG LL RNK+YIVFYRGNDF+ P V + E+
Sbjct: 580 SIAKIAIKRGVPNTCNDRMAEEIRKLTGGVLLSRNKEYIVFYRGNDFITPKVRQVLVEKQ 639
Query: 550 KLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMM 609
+ QDEEE AR ASA I +K K F VAGTLAET A SRWG + E +K
Sbjct: 640 EQAITWQDEEELARLKASASISVKPKVFKNPPVAGTLAETREAKSRWGDSINAELRKKEK 699
Query: 610 RDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLL 669
L++H SLLR L++KL LAK K+ A+KALAKVQE L PAELP+DLET+T+EERFLL
Sbjct: 700 NHMILTKHTSLLRNLKRKLILAKTKVIKAEKALAKVQEFLSPAELPTDLETVTDEERFLL 759
Query: 670 RKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESG 729
R++GL MK +L+LGRR ++DGT++NMHLHWK+RELVK++VKGKSF QVK IAISLEAESG
Sbjct: 760 RRIGLKMKAFLMLGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQVKHIAISLEAESG 819
Query: 730 GVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDL 789
GVL+S+DKT KG AII+YRGKNY P L+P+NLL+RR+ALARS+ELQRREGL HHI +L
Sbjct: 820 GVLISVDKTTKGYAIILYRGKNYKTPQILKPRNLLSRRKALARSIELQRREGLNHHISNL 879
Query: 790 QERIELVKSEL 800
+++I +KS+L
Sbjct: 880 RDKIWKLKSQL 890
>gi|297803062|ref|XP_002869415.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
gi|297315251|gb|EFH45674.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
Length = 775
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/757 (50%), Positives = 488/757 (64%), Gaps = 121/757 (15%)
Query: 65 FFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNEPETDVESRVR--------------- 109
FFE+I KWS ++ EK PWQ++EE+ +Q+ + ESR
Sbjct: 83 FFEEISDKWSSRISPKTEKLPWQKQEEQ---IQHHKDDGDESRSNLSSGYGLSDKRTDSN 139
Query: 110 -----SEPFSSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTV 164
+EP + P+ ++SAPW++ SK + F + SFE+ V
Sbjct: 140 RLYSANEPSTFPRPSGYMSAPWVNNGGSKGVNFTT-------------------SFEQGV 180
Query: 165 VHSAVKEKTVIELDKEGDYNKELKTDEVKIDANPIELSKDRHREVGSLNQKQIKGYHEVD 224
S+ + VI +D+ Y ++ + +D++ + E G ++ + KG
Sbjct: 181 ESSSFDD--VITVDR---YRRDNDSSNRGVDSDLDD------GERGMIDSGKDKGI---- 225
Query: 225 DPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSI 284
WK RRSNT AE+++PEHEL+RLR+++LRM+ER KVGSAGITQ LV +I
Sbjct: 226 ------WKT-----RRSNTAEAERVVPEHELRRLRSVALRMVERVKVGSAGITQVLVQAI 274
Query: 285 HEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQS 344
HEKW++DEVVKLKF EP SL MKRTHE+LE
Sbjct: 275 HEKWEVDEVVKLKFGEPFSLNMKRTHEVLENNLN-------------------------- 308
Query: 345 FTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLD 404
TKH + YVP+ AN +N+ KE+L +LCELN LLD
Sbjct: 309 -TKHVEAR-----------------------DYVPEDANYPKNVPKEQLSELCELNDLLD 344
Query: 405 ELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTP 464
ELGPRF DW G P PVDADLLP V Y+ P R+LP G+KP L + E TE RRLAR +P
Sbjct: 345 ELGPRFHDWTGCAPFPVDADLLPGYVEGYRCPFRILPQGVKPCLSNTEMTEMRRLARTSP 404
Query: 465 PHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRN 524
PHFALGR+RELQGLAKAMVKLW KSAIAKIAIKR V NTRNERMAEELK+LT G L+ RN
Sbjct: 405 PHFALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNERMAEELKRLTRGVLVSRN 464
Query: 525 KDYIVFYRGNDFLPPVVTDAVKERSK-LTDIRQDEEERARHVASALIEL--KAKGFVGSL 581
K+YIVFYRGNDF+PP V +A+ ER K +T++ Q +E++ R +AS + L +AK L
Sbjct: 465 KEYIVFYRGNDFMPPAVAEALTERQKEITEVLQTKEDQVREMASTRVTLTSQAKSPKTQL 524
Query: 582 VAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKA 641
+AGTLAET+AA+SRW S D+E++ R+S + A+L+R LE +L K+KL+ A++
Sbjct: 525 LAGTLAETIAASSRWAPDASSVDIEELKRESASIKRAALIRDLELRLLYGKQKLRRAERD 584
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
LAKVQ+ LDP+ELP+D ETIT EER L RK+GLSM P+LLLGRR +YDGTIENMHLHWK+
Sbjct: 585 LAKVQKDLDPSELPTDSETITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKH 644
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
RELVK+IV+GKS QVK IAISLEAESGGVLVS+DKT KG +II+YRGKNY P +LRP
Sbjct: 645 RELVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYSIILYRGKNYQMPFRLRPS 704
Query: 762 NLLTRRQALARSVELQRREGLKHHILDLQERIELVKS 798
NLLTR++A ARS+ELQRRE LK+H+ DL+ERIEL+K+
Sbjct: 705 NLLTRKKAFARSIELQRREALKYHVADLEERIELLKT 741
>gi|414885161|tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
Length = 964
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/720 (52%), Positives = 477/720 (66%), Gaps = 46/720 (6%)
Query: 123 SAPWIHGTDSKEIKFDSPQTKITTKKEDIGD--DGLLGSFEKTVVHSAVKEKTV---IEL 177
SAPWIH +S + S ++ DI D D LG ++ + E+ + +E
Sbjct: 192 SAPWIHREESTNDRGVSGPVAEEEERLDIRDASDDELGLVDEDKEETDNGEELLTGGLED 251
Query: 178 DKEGDY-----NKELKTDEVKIDANPIELSKDRHREVGSLNQ--KQIKGYHEVDD----- 225
+ DY N D + +D + DR S+N K ++ E D
Sbjct: 252 EFYDDYATPTMNSSYGVD-LSVDKDAYGSRFDRSMMQSSVNTIVKTLRNSMEESDPNATV 310
Query: 226 -------------PSVLPWKRNTDRR---------RRSNTELAEKMIPEHELQRLRNISL 263
P++LPW+R + RRSNTELAE+ IPE EL+RLR+ +L
Sbjct: 311 ELSNAEDFVQKLGPALLPWEREEEDDEAFSGGRAVRRSNTELAERSIPEPELRRLRDTAL 370
Query: 264 RMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIW 323
RM ER KVG G+TQ +V+SIH KWK+DEVVK++FE P SL MKRTH++LE RTGG+VIW
Sbjct: 371 RMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVIW 430
Query: 324 RSGSSVVLFRGMAYKLPCVQSFTKH---NHTQQTQDVTNEVMRNVGEHPPRSAMESYVPD 380
RSG SVVL+RGM Y CVQS+ K + + D + V+ + G + S +
Sbjct: 431 RSGRSVVLYRGMNYNFQCVQSYAKFIEIDSGKGVSDANSAVLSHDGHNLQASRADGMKSL 490
Query: 381 SANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLL 440
++ +L E D ++ LD+LGPR+KDW GR P+PVDADLLP VV YKPP R+L
Sbjct: 491 TSTGNFSLESSETFD---IDNFLDQLGPRYKDWSGRGPIPVDADLLPGVVHGYKPPFRVL 547
Query: 441 PYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDV 500
PY IK LRD E T RRLAR+T PHFALGRNRE QGLA AMVKLWEKSAIAKIAIKR +
Sbjct: 548 PYKIKSTLRDKEMTTLRRLARQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGI 607
Query: 501 MNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEE 560
NT N+RMAEE+KKLTGG LL RNK++IVFYRGNDF+ P V + E+ + +QDEEE
Sbjct: 608 PNTCNDRMAEEIKKLTGGVLLSRNKEFIVFYRGNDFIAPKVRQVLVEKQEQAITQQDEEE 667
Query: 561 RARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASL 620
AR ASA I K G LVAGTLAET A SRWG+ + + E+ M+ +L +H SL
Sbjct: 668 LARLKASASIITIPKDIKGPLVAGTLAETTEAKSRWGKSVNDKQREEEMKHLSLLKHTSL 727
Query: 621 LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYL 680
L+ L++KL LAK K+ A+KALAKVQE L PAELP+DLET+T+EERFL R++GL M+ +L
Sbjct: 728 LKNLKRKLILAKTKVAKAEKALAKVQEFLTPAELPTDLETVTDEERFLFRRIGLKMRAFL 787
Query: 681 LLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPK 740
+LGRR ++DGT++NMHLHWK+RELVKI+V+GKSFAQ K IAISLEAES GVL+SLDKT K
Sbjct: 788 MLGRREVFDGTVQNMHLHWKHRELVKIVVRGKSFAQAKHIAISLEAESEGVLISLDKTTK 847
Query: 741 GIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
G II YRGKNY RP ++P+NLLTRRQALARS+ELQRRE LKHHI LQ +I ++S+L
Sbjct: 848 GYVIIFYRGKNYRRPQIMKPRNLLTRRQALARSIELQRREALKHHISSLQGKISKLQSQL 907
>gi|125549065|gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indica Group]
Length = 893
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/829 (46%), Positives = 500/829 (60%), Gaps = 147/829 (17%)
Query: 56 RTKRKVKPSFFEQIRHKWSHKVISPREKFPW-----------QEEEEEEEEVQNEPETDV 104
+ +R +KPSF +Q +WS + S R FPW + E ++E + +
Sbjct: 70 KKRRSLKPSFEKQAIRRWSARAPSQRASFPWQQQQQQQPAGGEGEAAGDQESGWSGSSTL 129
Query: 105 ESRV-----------------------------------RSEPFSSALPNRFVSAPWIHG 129
+S V R EP S L +R VSAPW+HG
Sbjct: 130 QSIVDYFDFDYDSSDGDGDGDGDGVVVGGEAAEAQEDGPRPEP-SFLLGSRPVSAPWMHG 188
Query: 130 TDSKEIKFDSPQT-KITTKKEDIGDDGLL-----------------------------GS 159
+ P T ++ + +E + DG G
Sbjct: 189 EEE-------PMTNQLVSDEEGLDGDGASEDEMGLVDGDGDEDEDLGSEEETLSESSDGE 241
Query: 160 FEKTVVHSAVKEKTVIE-----LDKEGDYNKELKTDEVKIDANPIELSKDRHREVGSLNQ 214
F + A ++++ + G + + + V N + S + ++
Sbjct: 242 FSEDYAAPAANSSSMMDSVLDHVSSGGGFYRGTRRSSVNSIVNTMRNSMEESSRNAAIEC 301
Query: 215 KQIKGYHEVDDPSVLPWKR--NTDR-RRRSNTELAEKMIPEHELQRLRNISLRMLERTKV 271
+ + + + P +LPW+R + DR R+RSNTELAE+ IPEHEL+RLR+++LRM ER +V
Sbjct: 302 PETEDFVQKLGPVLLPWEREGDVDRPRKRSNTELAERTIPEHELRRLRDVALRMKERMRV 361
Query: 272 GSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVL 331
G G+TQ +V+SIH+KW+++EVVKL+FE P SL MKRTH+ILE RTGG+VIWRSG SVVL
Sbjct: 362 GPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRSVVL 421
Query: 332 FRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKE 391
+RGM Y L CVQS+ TQ T
Sbjct: 422 YRGMNYNLRCVQSY-----TQTT------------------------------------- 439
Query: 392 ELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDC 451
ELGPR+KDW GR P+PVDADLLP VVP YK P RLLPY +K LR+
Sbjct: 440 -------------ELGPRYKDWSGRGPIPVDADLLPGVVPGYKTPFRLLPYMVKSTLRNK 486
Query: 452 ETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEE 511
E T RRLAR+T PHFALGRNRE QGLA A+VKLWEKS+IAKIAIKR V NT N+RMAEE
Sbjct: 487 EMTALRRLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCNDRMAEE 546
Query: 512 LKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIE 571
++KLTGG LL RNK+YIVFYRGNDF+ P V + E+ + QDEEE AR ASA I
Sbjct: 547 IRKLTGGVLLSRNKEYIVFYRGNDFITPKVRQVLVEKQEQAITWQDEEELARLKASASIS 606
Query: 572 LKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALA 631
+K K F VAGTLAET A SRWG + E +K L++H SLLR L++KL LA
Sbjct: 607 VKPKVFKNPPVAGTLAETREAKSRWGDSINAELRKKEKNHMILTKHTSLLRNLKRKLILA 666
Query: 632 KRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGT 691
K K+ A+KALAKVQE L PAELP+DLET+T+EERFLLR++GL MK +L+LGRR ++DGT
Sbjct: 667 KTKVIKAEKALAKVQEFLSPAELPTDLETVTDEERFLLRRIGLKMKAFLMLGRREVFDGT 726
Query: 692 IENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN 751
++NMHLHWK+RELVK++VKGKSF QVK IAISLEAESGGVL+S+DKT KG AII+YRGKN
Sbjct: 727 VQNMHLHWKHRELVKVLVKGKSFPQVKHIAISLEAESGGVLISVDKTTKGYAIILYRGKN 786
Query: 752 YVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
Y P L+P+NLL+RR+ALARS+ELQRREGL HHI +L+++I +KS+L
Sbjct: 787 YKTPQILKPRNLLSRRKALARSIELQRREGLNHHISNLRDKIWKLKSQL 835
>gi|357158137|ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 962
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/763 (49%), Positives = 484/763 (63%), Gaps = 60/763 (7%)
Query: 96 VQNEPETDVESRVRSEPFSSALPNRFVSAPWIHGTDSKEIK------FDSPQTKITTKKE 149
E D + S+P S + +R VSAPW+HG + + + ++ T
Sbjct: 161 AHGEAAQDRDEESHSQP-SYLIGSRPVSAPWMHGEEEPSVDQLVSGPVGGDEEEVDTNGM 219
Query: 150 DIGDDGLLGSFEKTVVHSAVKEKTVIELDKEGDYNKELKTDEVKIDANP---IELSKDRH 206
+ GL+ E+ + V E+ + + EG EL D AN ++ D+
Sbjct: 220 VDDELGLVDGNEECAYNDDVFEEEPMNGNLEG----ELFEDSATPTANSSFLMDFVVDQG 275
Query: 207 REVGSLN------------------------QKQIKGYHEVD-----DPSVLPWKRNTD- 236
G ++ I HE D +LPW+R D
Sbjct: 276 SRGGGIDRSIRRSSVSSIVSTLRNSMEESGPNATIGCSHEEDFVQKLGSVLLPWEREDDD 335
Query: 237 ------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKL 290
+ RSNTELAEK IPE EL+RLR+ +LRM ER ++G G+TQA+V SIH KW +
Sbjct: 336 AFDGVRQGNRSNTELAEKTIPEPELRRLRDAALRMKERMRIGPGGVTQAIVKSIHSKWSV 395
Query: 291 DEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNH 350
DEVVK++FE P SL MKRTHEILE RTGG VIWRSG S+VL+RGM Y L CVQS+ K
Sbjct: 396 DEVVKMRFEGPPSLNMKRTHEILEDRTGGTVIWRSGRSIVLYRGMNYNLRCVQSYAKIAE 455
Query: 351 TQQTQDVTN--EVMRNVGEHPPRSAMESYVPDSANNLENL--SKEELMDLCELNYLLDEL 406
++ V++ V+ + EH ++ D N ++ S + + +++ LD+L
Sbjct: 456 VDSSKKVSDVSTVVPSCVEH----NLQKSSADGVNRSTSIVSSSQGATETFDIDSFLDQL 511
Query: 407 GPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPH 466
GPR+KDW GR P+PVDADLLP VVPDYKPP R LPY K LRD E T RRLAR+T PH
Sbjct: 512 GPRYKDWSGRSPIPVDADLLPGVVPDYKPPFRQLPYRTKLSLRDKEMTALRRLARQTAPH 571
Query: 467 FALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKD 526
FALGRNRE QGLA A+VKLWEKS I KIAIKR V NT N+RMAEE+KKLTGG L+ RNK+
Sbjct: 572 FALGRNREHQGLASAIVKLWEKSTIVKIAIKRGVPNTCNDRMAEEIKKLTGGVLISRNKE 631
Query: 527 YIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTL 586
YI+FYRGNDF+ P + + E+ + +QD+EE AR ASA I L VAGTL
Sbjct: 632 YIIFYRGNDFMTPKIRQVLVEQQQQAITQQDQEELARLKASASITLIPNALKNPQVAGTL 691
Query: 587 AETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQ 646
AET A SRWG + +K L++H SLL+ + +KL LAK K+ A+ ALAKVQ
Sbjct: 692 AETREAESRWGDLINDGRRKKERNHLILAKHTSLLKNMTRKLILAKTKVAKAEMALAKVQ 751
Query: 647 ESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVK 706
E L PAELP+DLET+T+EERFL R++GL MK +L+LGRR ++ GT++NMHLHWK+RELVK
Sbjct: 752 EFLSPAELPTDLETVTDEERFLFRRIGLKMKAFLMLGRREVFAGTVQNMHLHWKHRELVK 811
Query: 707 IIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTR 766
IIVKGKSFAQVK IAISLEAESGGVL+SLDKT KG +IIVYRGKNY RP L+P+NLLTR
Sbjct: 812 IIVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYSIIVYRGKNYKRPQILKPRNLLTR 871
Query: 767 RQALARSVELQRREGLKHHILDLQERIELVKSELEE--IEGGK 807
R+A+ARS+ELQRRE L HHI L+++I +KS+L + + GGK
Sbjct: 872 RRAMARSIELQRREALNHHISILRQKIWKLKSQLAQMRVAGGK 914
>gi|5123569|emb|CAB45335.1| putative protein [Arabidopsis thaliana]
gi|7269874|emb|CAB79733.1| putative protein [Arabidopsis thaliana]
Length = 776
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/759 (48%), Positives = 481/759 (63%), Gaps = 124/759 (16%)
Query: 65 FFEQIRHKWSHKVISPREKFPWQEEEEE--------------------EEEVQNEPETDV 104
FFE+I KWS ++ EK PWQ++EE+ ++ TD
Sbjct: 83 FFEEISDKWSSRISPKTEKLPWQKQEEQIQHHEDEEDEEGDESSSNLSSGNGLSDKRTD- 141
Query: 105 ESRVRS--EPFSSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEK 162
+R+ S EP+S P+ ++SAPW++ SK + F + S E+
Sbjct: 142 SNRLYSANEPWSFPRPSGYMSAPWVNNGGSKGVNFTT-------------------SSEQ 182
Query: 163 TVVHSAVKEKTVIELDKEGDYNKELKTDEVKIDANPIELSKDRHREVGSLNQKQIKGYHE 222
+ S+ + T ++ Y ++ + + +D++ L + S N K I
Sbjct: 183 GIQSSSFHDVTTVD-----RYRRDNDSSDRAVDSD---LDDGERGMIDSGNNKGI----- 229
Query: 223 VDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVD 282
W R R+SNT AE+++PEHEL+RLRN++LRM+ER KVGSAGITQALV+
Sbjct: 230 --------W-----RTRKSNTVEAERIVPEHELKRLRNVALRMVERVKVGSAGITQALVE 276
Query: 283 SIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCV 342
+IHEKW++DEVVKLKF EP+SL MKRTHE+LE
Sbjct: 277 AIHEKWEVDEVVKLKFSEPYSLNMKRTHEVLE---------------------------- 308
Query: 343 QSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYL 402
+ E+ R+V YV + N +N+ KE+L +LCELN L
Sbjct: 309 ----------NNLEANPEIHRSV-------EARDYVQEDGNYPKNVPKEQLSELCELNDL 351
Query: 403 LDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARK 462
LDE+GPRF DW G P PVDADLLP V Y+ P R+LP G+KP L + E TE RRLAR
Sbjct: 352 LDEVGPRFHDWTGCAPFPVDADLLPGYVEGYRCPFRILPQGVKPCLSNTEMTEMRRLART 411
Query: 463 TPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLC 522
+PPHFALGR+RELQGLAKAMVKLW KSAIAKIAIKR V NTRNERMAEELK+LT G L+
Sbjct: 412 SPPHFALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNERMAEELKRLTRGVLVS 471
Query: 523 RNKDYIVFYRGNDFLPPVVTDAVKERSK-LTDIRQDEEERARHVAS--ALIELKAKGFVG 579
RNK+YIVFYR V +A+ ER K +T++ Q +E++AR +AS A + +AK
Sbjct: 472 RNKEYIVFYR--------VAEALTERQKEITEVLQAKEDQAREMASTRATLTSQAKSPKT 523
Query: 580 SLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMAD 639
L+AGTLAET+AA+SRW S D+E++ R+S + A+L+R LE +L K+KL+ A+
Sbjct: 524 QLLAGTLAETIAASSRWAPNASSVDIEELKRESASIKRAALIRDLELRLLYGKQKLRRAE 583
Query: 640 KALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHW 699
+ LAKVQ+ LDP+ELP+D E IT EER L RK+GLSM P+LLLGRR +YDGTIENMHLHW
Sbjct: 584 RDLAKVQKDLDPSELPTDSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHW 643
Query: 700 KYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLR 759
K+RELVK+IV+GKS QVK IAISLEAESGGVLVS+DKT KG AII+YRGKNY P +LR
Sbjct: 644 KHRELVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFRLR 703
Query: 760 PQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKS 798
P NLLTR++A ARS+ELQRRE LK+H+ DL+ERIEL+K+
Sbjct: 704 PSNLLTRKKAFARSIELQRREALKYHVADLEERIELLKT 742
>gi|357441009|ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355479830|gb|AES61033.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 838
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 321/606 (52%), Positives = 429/606 (70%), Gaps = 18/606 (2%)
Query: 217 IKGYHEVDDPSV-LPWKR---------NTDRRRRSNTELAEKMIPEHELQRLRNISLRML 266
I Y D V PW++ T R++S T +AE +PE EL+RL ++
Sbjct: 168 IGSYGSGDGGEVRFPWEKPVVDEEVEERTSSRKKSKTSMAELTLPESELRRLLKLTFMKK 227
Query: 267 ERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSG 326
+T++G G+TQA VD IHE+WK E+V+LKFE +L MKR HEILE++TGGLVIWRSG
Sbjct: 228 HKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILEKKTGGLVIWRSG 287
Query: 327 SSVVLFRGMAYKLPCVQSFTK-HNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNL 385
+SV L+RG++YK P +Q + + +++ + + P +S S L
Sbjct: 288 NSVSLYRGVSYKDPSIQQNKQLYRKNEKSLKFLSAPSDDFEVEPSEFTTDSETKTSLEKL 347
Query: 386 ENLS-KEELMDLCELNY------LLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLR 438
E+ + ++E ++L +++Y LLD LGPR+ DWPG EPLPVDAD+LPP VP Y+PP R
Sbjct: 348 ESTNDQKEKVNLPKISYEDEVDKLLDGLGPRYTDWPGCEPLPVDADMLPPTVPGYQPPFR 407
Query: 439 LLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKR 498
+LP+G++P L E T RR+AR PPHFALGRNR+LQGLA AM+KLWEKS+IAK+A+KR
Sbjct: 408 VLPFGVRPTLGFKEATSLRRIARGLPPHFALGRNRQLQGLAAAMIKLWEKSSIAKVALKR 467
Query: 499 DVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDE 558
V T +ERMAEE+KKLTGG +L RNKD++VFYRG +FL P VT A+ ER K+ QDE
Sbjct: 468 GVQLTTSERMAEEIKKLTGGIILSRNKDFLVFYRGKNFLSPDVTQALLEREKMAKSMQDE 527
Query: 559 EERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHA 618
EE+AR AS+LI S AGTL ETL A ++WG+ +K+MR+ RHA
Sbjct: 528 EEQARLRASSLILPAINTSELSAEAGTLGETLDADAKWGKTLDECHEQKVMREVEQLRHA 587
Query: 619 SLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKP 678
+++R LE+KL+LA+RK++ A++AL KV+ SL P+E +D E+IT+EERF+ RK+GL MK
Sbjct: 588 NIVRKLEEKLSLAERKIRRAERALMKVEVSLKPSETRADPESITDEERFMFRKLGLRMKA 647
Query: 679 YLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKT 738
+LLLGRRG++DGTIENMHLHWKYRELVKIIVK +F VK+IA++LEAESGGVLVS+DK
Sbjct: 648 FLLLGRRGVFDGTIENMHLHWKYRELVKIIVKANNFEHVKKIALALEAESGGVLVSVDKV 707
Query: 739 PKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKS 798
KG +I+VYRGK+Y RP LRP+NLLT+R+ALARS+ELQR E L HI LQ ++E ++S
Sbjct: 708 SKGYSILVYRGKDYQRPSMLRPKNLLTKRKALARSIELQRHEALSSHISTLQSKVEKLRS 767
Query: 799 ELEEIE 804
E+E+IE
Sbjct: 768 EIEQIE 773
>gi|356576487|ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 835
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 321/603 (53%), Positives = 425/603 (70%), Gaps = 17/603 (2%)
Query: 219 GYHEVDDPSV-LPWKR--------NTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERT 269
G DD V PW++ R RS T LAE +PE EL+RL ++ +T
Sbjct: 171 GSFGSDDREVRFPWEKPVVEELEERKSMRSRSKTSLAELTLPESELKRLLKLTFEKKHKT 230
Query: 270 KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 329
++G +G+TQA+VD IHE+WK E+V+LKFE +L MKR HEILER+TGGLVIWRSG+SV
Sbjct: 231 RIGRSGVTQAVVDKIHERWKTSEIVRLKFEGEAALNMKRMHEILERKTGGLVIWRSGNSV 290
Query: 330 VLFRGMAYKLPCVQSFTK-HNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENL 388
L+RG++Y++P VQ K + ++ + + N +P A S LE+
Sbjct: 291 SLYRGVSYEVPSVQQNKKIYRKSENSSKLLPTPSYNSVGNPSDIASNSGTSAPLAKLEST 350
Query: 389 SKEELMD-LCELNY------LLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLP 441
+ E+ D L ++NY LLD LGPR+ DWPG +PLPVDAD+LP VP Y+PP R+LP
Sbjct: 351 NDEKERDYLPKVNYEHEVDKLLDGLGPRYTDWPGCDPLPVDADMLPVTVPGYQPPFRVLP 410
Query: 442 YGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVM 501
+G++ L E T RR+AR PPHFALGRNR+LQGLA AM+KLWE S+IAK+A+KR V
Sbjct: 411 FGVRATLGLREATALRRIARTLPPHFALGRNRQLQGLAVAMIKLWEISSIAKVALKRGVQ 470
Query: 502 NTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEER 561
T +ERMAEE+KKLTGG LL RNKD++VF+RG +FL VT A+ ER ++ + QDEEE+
Sbjct: 471 LTTSERMAEEIKKLTGGILLSRNKDFLVFFRGKNFLSADVTQALLERERMAKVMQDEEEQ 530
Query: 562 ARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLL 621
AR AS+L+ S AGTL ETL A ++WG+ +K+MR+ RHA+L+
Sbjct: 531 ARLRASSLLIPTNNTSELSAEAGTLGETLDADAKWGKTLDERHKQKIMREVEQLRHANLV 590
Query: 622 RYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLL 681
+ LEQKL+ A+RKL+ A+KAL KV+ L P+E +D E+IT+EERF+ RK+GL MK +LL
Sbjct: 591 KKLEQKLSFAERKLRRAEKALMKVESFLKPSEYKADPESITDEERFMFRKLGLRMKAFLL 650
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGRRG++DGTIENMHLHWKYRELVKIIVK K+F QVK+IA++LEAESGGVLVS+DK KG
Sbjct: 651 LGRRGVFDGTIENMHLHWKYRELVKIIVKAKTFEQVKKIALALEAESGGVLVSVDKVSKG 710
Query: 742 IAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELE 801
++IVYRGK+Y RP LRP+NLLT+R+ALARS+ELQR E L +HI LQ ++ ++SE+E
Sbjct: 711 YSVIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRHEALMNHISTLQSKVGRIRSEIE 770
Query: 802 EIE 804
++E
Sbjct: 771 QME 773
>gi|224111046|ref|XP_002315729.1| predicted protein [Populus trichocarpa]
gi|222864769|gb|EEF01900.1| predicted protein [Populus trichocarpa]
Length = 894
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 311/586 (53%), Positives = 426/586 (72%), Gaps = 29/586 (4%)
Query: 238 RRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLK 297
R +S T LAE +PE EL+RLRN++ +T+VG G+TQ +VD+IH+KWK E+ ++K
Sbjct: 200 RSKSRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARVK 259
Query: 298 FEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYK------------------- 338
E +L MKR HEILE +TGGLVIWRSG++V L+RG++Y+
Sbjct: 260 VEGAPALNMKRMHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKETSSN 319
Query: 339 -LPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLC 397
LP S T + ++ + D NE+ H PR E V ++AN E ++ ++
Sbjct: 320 SLPAATSITIGSQSKNSPD--NEI------HAPRPKTEINV-EAANQKETKTQTDVKYED 370
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E++ LLD LGPR+ DWPG +PLPVDAD+LP V+P Y+PP R+LPYG++P L ++T R
Sbjct: 371 EVDKLLDGLGPRYTDWPGLDPLPVDADMLPGVIPGYQPPFRILPYGVRPTLGRQDSTSLR 430
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLAR PPHFA+GR+R+LQGLA AM+KLWEKS+I K+A+KR V T +ERMAE++KKLTG
Sbjct: 431 RLARVLPPHFAVGRSRQLQGLAVAMIKLWEKSSIVKVALKRGVQLTTSERMAEDIKKLTG 490
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
G LL RNKD++VFYRG DFL P V++A+ ER +L QDEEE+AR ASAL+ +
Sbjct: 491 GLLLSRNKDFLVFYRGKDFLSPEVSEALLERERLAKSLQDEEEQARLRASALVIPSDEIM 550
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKM 637
S +AG+L ETL A ++WG++ EK++R++ + RHAS++R LE+KLA A+RKL+
Sbjct: 551 EESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEIVRHASIVRRLEKKLAFAQRKLRR 610
Query: 638 ADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHL 697
A++ L KV+ L P+E +D E+IT+EERF+ RK+GL MK +LLLGRRG++DGT+ENMHL
Sbjct: 611 AERTLNKVEGFLKPSERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHL 670
Query: 698 HWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLK 757
HWKYRELVKII+K KSF QVK+IA++LEAESGGVLVS+DK KG AIIVYRGK+Y RP
Sbjct: 671 HWKYRELVKIILKAKSFEQVKKIALALEAESGGVLVSVDKISKGYAIIVYRGKDYQRPSM 730
Query: 758 LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEI 803
LRP+NLLT+R+ALARS+E+QR E L++H+ L+ ++E ++SE+E++
Sbjct: 731 LRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKIRSEIEQM 776
>gi|225432918|ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product [Vitis vinifera]
Length = 902
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 319/596 (53%), Positives = 426/596 (71%), Gaps = 22/596 (3%)
Query: 229 LPWKR----NTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSI 284
PW+R R +S T LAE +PE EL+RLRN+++R +TK+G G+TQA+VD I
Sbjct: 195 FPWERPKVEEGSVRIKSRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMI 254
Query: 285 HEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC--- 341
EKWK E+VKLK E +L M+R HEILER+TGGLVIWRSG+SV L+RG++Y++P
Sbjct: 255 REKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVPVQLN 314
Query: 342 --VQSFTKHNHTQQTQDVTNEVM----RNVGEHPPRSAMESYVPDSAN----NLENLSKE 391
V + +H+ + N + G P + ++ A + EN E
Sbjct: 315 KRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGSNQNVHASQATLNITDGENKDTE 374
Query: 392 -ELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRD 450
E+ E++ LLD LGPR+ DWPG +PLP+DADLLP + Y+PP R+LPYG++ L
Sbjct: 375 SEVKYEDEIDKLLDGLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGL 434
Query: 451 CETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAE 510
E T RRLAR PPHFALGR+R+L+GLA AM+KLWE+S+IAK+A+KR V T +ERMAE
Sbjct: 435 KEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAE 494
Query: 511 ELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALI 570
++KKLTGG LL RNKD++VFYRG +FL VT+A+ ER +L QDEEE+AR AS LI
Sbjct: 495 DIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLI 554
Query: 571 E--LKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKL 628
+ VGS AGTL ETL A +RWG++ D +KM++ + ++RHA+L+R LE++L
Sbjct: 555 TPTVGITEQVGS--AGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRL 612
Query: 629 ALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
ALA+RKL A+ AL+KV+E L PA P+D E+IT+EERF+ RK+GL MK +LLLGRRG++
Sbjct: 613 ALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVF 672
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
GT+ENMHLHWKYRELVKIIVK K+F QVK+ A++LE+ESGGVLVS+DK KG AI+V+R
Sbjct: 673 SGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFR 732
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
GK+Y RP LRP+NLLT+R+ALARS+ELQRRE L +HI LQ +E ++SE+E+++
Sbjct: 733 GKDYQRPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMD 788
>gi|255551945|ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
gi|223543652|gb|EEF45180.1| conserved hypothetical protein [Ricinus communis]
Length = 773
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 308/577 (53%), Positives = 419/577 (72%), Gaps = 10/577 (1%)
Query: 238 RRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLK 297
R +S T+LAE +PE EL+RLRN++ ++ + +V AG+TQ +VDSIH++WK E+V++K
Sbjct: 93 RSKSRTQLAELTLPESELRRLRNLTYQIKSKVRVKGAGVTQEVVDSIHDRWKTSEIVRVK 152
Query: 298 FEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDV 357
E +L M+R HEILER+TGGLVIWRSG+SV L+RG++Y+ P VQ + + +
Sbjct: 153 VEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVSYEDPSVQLNKQILKRNELSNN 212
Query: 358 TNEVMRNVGEHPPRSAMESYVP----DSANNLENLSKEELMDLCELNY------LLDELG 407
+ + P +SA S + +S + E K+E+ E+ Y LL+ LG
Sbjct: 213 SLSTATGIIRSPSKSAASSDLNMPHLNSDSTAEGEEKKEIEMETEVKYEDEVDKLLEGLG 272
Query: 408 PRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHF 467
PR+ DW G +PLPVDAD+LP ++P Y+PP R+LPYG++ L E T RRLAR PPHF
Sbjct: 273 PRYTDWAGLDPLPVDADMLPGIIPGYQPPFRILPYGVRSSLGQKEATSLRRLARILPPHF 332
Query: 468 ALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDY 527
ALGR+R+LQGLA AM+KLWEKS+IAKI++KR V T +ERMAE++KKLTGG LL RNKD+
Sbjct: 333 ALGRSRQLQGLADAMIKLWEKSSIAKISLKRGVQLTTSERMAEDIKKLTGGMLLSRNKDF 392
Query: 528 IVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLA 587
+VFYRG DFL P VT+A+ ER +L QD+EE+AR ASAL A+ AGTL
Sbjct: 393 LVFYRGKDFLSPEVTEALVERERLAQSLQDKEEQARLRASALFVQTAETLEQPGTAGTLE 452
Query: 588 ETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQE 647
ETL A +RWG+ EK+MR++ ++RHA+L+R LE KLA A++KL A++AL+KV+
Sbjct: 453 ETLDADARWGKCLDQNHREKIMREAEIARHANLVRKLESKLAFAEKKLMKAERALSKVEV 512
Query: 648 SLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKI 707
L PAE +D E+IT+EERF+ RK+GL MK +LLLGRRG++DGT+ENMHLHWKYRELVKI
Sbjct: 513 FLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI 572
Query: 708 IVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRR 767
I+K K+ QVK+IA++LEAESGG+LVS+D+ KG AIIV+RGK+Y RP KLRP NLLT+R
Sbjct: 573 ILKAKNIEQVKKIALALEAESGGILVSVDRVSKGYAIIVFRGKDYQRPSKLRPGNLLTKR 632
Query: 768 QALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
+ALARS+E+QR E L HI LQ++++ ++ E+ ++E
Sbjct: 633 KALARSIEIQRSEALLKHISALQKKVDKIRYEIAQME 669
>gi|147852748|emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 318/596 (53%), Positives = 425/596 (71%), Gaps = 22/596 (3%)
Query: 229 LPWKR----NTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSI 284
PW+R R +S T LAE +PE EL+RLRN+++R +TK+G G+TQA+VD I
Sbjct: 195 FPWERPKVEEGSVRIKSRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMI 254
Query: 285 HEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC--- 341
EKWK E+VKLK E +L M+R HEILER+TGGLVIWRSG+SV L+RG++Y++P
Sbjct: 255 REKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVPVQLN 314
Query: 342 --VQSFTKHNHTQQTQDVTNEVM----RNVGEHPPRSAMESYVPDSAN----NLENLSKE 391
V + +H+ + N + G P + ++ A + EN E
Sbjct: 315 KRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGSNQNVHASQATLXITDGENKDTE 374
Query: 392 -ELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRD 450
E+ E++ LLD LGPR+ DWP +PLP+DADLLP + Y+PP R+LPYG++ L
Sbjct: 375 SEVKYEDEIDKLLDGLGPRYTDWPXCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGL 434
Query: 451 CETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAE 510
E T RRLAR PPHFALGR+R+L+GLA AM+KLWE+S+IAK+A+KR V T +ERMAE
Sbjct: 435 KEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAE 494
Query: 511 ELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALI 570
++KKLTGG LL RNKD++VFYRG +FL VT+A+ ER +L QDEEE+AR AS LI
Sbjct: 495 DIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLI 554
Query: 571 E--LKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKL 628
+ VGS AGTL ETL A +RWG++ D +KM++ + ++RHA+L+R LE++L
Sbjct: 555 TPTVGITEQVGS--AGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRL 612
Query: 629 ALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
ALA+RKL A+ AL+KV+E L PA P+D E+IT+EERF+ RK+GL MK +LLLGRRG++
Sbjct: 613 ALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVF 672
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
GT+ENMHLHWKYRELVKIIVK K+F QVK+ A++LE+ESGGVLVS+DK KG AI+V+R
Sbjct: 673 SGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFR 732
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
GK+Y RP LRP+NLLT+R+ALARS+ELQRRE L +HI LQ +E ++SE+E+++
Sbjct: 733 GKDYQRPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMD 788
>gi|449432614|ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 874
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/595 (52%), Positives = 415/595 (69%), Gaps = 22/595 (3%)
Query: 229 LPWKR-------NTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALV 281
PW++ + D RR + LA+ +PE EL+RLRN++ + + K+G G+TQA+V
Sbjct: 209 FPWEKPKEKEDTHGDSTRRGSASLAQLTLPEPELRRLRNLTFQKRHKMKIGGGGVTQAVV 268
Query: 282 DSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC 341
D IHEKWK E+V+LK P +L MKR HEILER+TGGLVIWRSG+S+ L+RG++Y+LP
Sbjct: 269 DVIHEKWKSSEIVRLKILGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYELPE 328
Query: 342 VQSFTKHNHTQ-------QTQDVT-----NEVMRNVGEHPPRSAMESYVPDSANNLENLS 389
F K + + +T T + RNV + A S + + E L+
Sbjct: 329 APQFNKRIYKRNEITALPKTGASTIAPSESSSHRNVYALQQKRAETSIEGEHCS--EQLT 386
Query: 390 KEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLR 449
K ++ E+N LLD LGPR+ DWPG +PLPVDAD+LP VVPDY+PP R+LPYG++ +
Sbjct: 387 KVQVNYEDEVNKLLDGLGPRYTDWPGLDPLPVDADMLPGVVPDYEPPFRILPYGVRSSIG 446
Query: 450 DCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMA 509
E T +RLAR+ PPHFALGRNR+LQGLA AM KLWE+S IAKIA+KR V T +ERMA
Sbjct: 447 VKEATALKRLARRLPPHFALGRNRQLQGLAIAMTKLWERSLIAKIALKRGVQLTTSERMA 506
Query: 510 EELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASAL 569
EE+KKLTGG LL RNKD++VFYRG FL P VT+A+ ER +L QD+EE+AR ASA
Sbjct: 507 EEIKKLTGGMLLSRNKDFLVFYRGKSFLSPEVTEALLERERLAKSLQDKEEQARLKASAF 566
Query: 570 IELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLA 629
+ + + S AG+L ETL A +RWG+ + E +MR++ RH L+R LE+KLA
Sbjct: 567 V-VPIEKTEQSGTAGSLEETLDADARWGKALDDKHKENVMREAEQLRHTDLVRKLERKLA 625
Query: 630 LAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYD 689
A+RKL A++ LAKV+ + PA+ ++ ++IT EERF+ RK+GL MK +LLLGRR ++D
Sbjct: 626 FAERKLVKAERTLAKVEAFMTPAKRQAEPDSITEEERFMFRKLGLRMKAFLLLGRREVFD 685
Query: 690 GTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
GT+ENMHLHWKYRELVKI++K SF VK IA+ LEAESGGVLVS+DK KG AIIVYRG
Sbjct: 686 GTVENMHLHWKYRELVKIMIKANSFDHVKNIALQLEAESGGVLVSIDKVSKGYAIIVYRG 745
Query: 750 KNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
K+Y RP LRP+NLLT+R+ALARS+ELQR E L HI +Q ++ + SE+E++E
Sbjct: 746 KDYKRPSLLRPKNLLTKRKALARSIELQRHEALLKHISAMQSKVGKLNSEIEQME 800
>gi|162459980|ref|NP_001106061.1| CRM family member 3 [Zea mays]
gi|156789080|gb|ABU96081.1| CRM family member 3 [Zea mays]
Length = 842
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/590 (53%), Positives = 407/590 (68%), Gaps = 18/590 (3%)
Query: 229 LPWKR------NTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVD 282
PW+R R RS T +AE +P EL+RLR+ ++R+ RTKVG AG+T+ +V+
Sbjct: 142 FPWERPMPPPEAAPRSARSPTWMAELTLPAAELRRLRHAAIRIKSRTKVGGAGVTREIVE 201
Query: 283 SIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCV 342
I EKWK +EVV++K +L M+ HEILER+TGGLVIWRSG+SV L+RG+ Y P
Sbjct: 202 KIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVDYDEPEP 261
Query: 343 QSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNL-ENLSKEELMDLC---- 397
+K N D + N P +A + V DS L N +KEEL+
Sbjct: 262 TKKSKKNSQSLAMDFPIKGSSNPSLLPTETA--NSVRDSNVALVSNAAKEELVVQAPEIK 319
Query: 398 ---ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETT 454
E++ LLDELGPR+ DWPG +PLPVDADLLP +P YKPP R+LPYG++P L +TT
Sbjct: 320 YEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPANMPGYKPPFRVLPYGVRPSLSRRDTT 379
Query: 455 EFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKK 514
RRLAR PPHFALGR+R+LQGLA AMVKLWEKS+IAKIA+KR V T +ERMAE++KK
Sbjct: 380 NLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKK 439
Query: 515 LTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKA 574
LTGG +L RN ++IVFYRG DFL + + + ER +L QDEEE R AS A
Sbjct: 440 LTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERERLAKSLQDEEEARRKAASYFS--SA 497
Query: 575 KGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRK 634
+ + VAGTL ETL A S++G + +KM R +RHA L+R LE KL+LA++K
Sbjct: 498 ETYAQPTVAGTLGETLEANSKYGTKHDENHADKMARTIEAARHADLVRKLEWKLSLAQKK 557
Query: 635 LKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIEN 694
++ A++ L KV+ +L P E ETIT+EERF+ RK+GL MK +LLLGRRG++DGTIEN
Sbjct: 558 MEKAERVLGKVETALRPTEDSRPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIEN 617
Query: 695 MHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVR 754
MHLHWKYRELVKI+VK KSFA VK+IA+SLEAESGG+LVS+DK KG AI+V+RGKNY R
Sbjct: 618 MHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRR 677
Query: 755 PLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
P LRP+NLL++R+ALARS+ELQR + L H L ++E +K+EL ++E
Sbjct: 678 PSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKAELVQME 727
>gi|414591664|tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
Length = 1523
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/590 (53%), Positives = 407/590 (68%), Gaps = 18/590 (3%)
Query: 229 LPWKR------NTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVD 282
PW+R R RS T +AE +P EL+RLR+ ++R+ RTKVG AG+T+ +V+
Sbjct: 823 FPWERPMPPPEAAPRSARSPTWMAELTLPAAELRRLRHAAIRIKSRTKVGGAGVTREIVE 882
Query: 283 SIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCV 342
I EKWK +EVV++K +L M+ HEILER+TGGLVIWRSG+SV L+RG+ Y P
Sbjct: 883 KIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVDYDEPEP 942
Query: 343 QSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNL-ENLSKEELMDLC---- 397
+K N D + N P +A + V DS L N +KEEL+
Sbjct: 943 TKKSKKNSQSLAMDFPIKGSSNPSLLPTETA--NSVRDSNVALVSNAAKEELVVQAPEIK 1000
Query: 398 ---ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETT 454
E++ LLDELGPR+ DWPG +PLPVDADLLP +P YKPP R+LPYG++P L +TT
Sbjct: 1001 YEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPANMPGYKPPFRVLPYGVRPSLSRRDTT 1060
Query: 455 EFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKK 514
RRLAR PPHFALGR+R+LQGLA AMVKLWEKS+IAKIA+KR V T +ERMAE++KK
Sbjct: 1061 NLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKK 1120
Query: 515 LTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKA 574
LTGG +L RN ++IVFYRG DFL + + + ER +L QDEEE R AS A
Sbjct: 1121 LTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERERLAKSLQDEEEARRKAASYFS--SA 1178
Query: 575 KGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRK 634
+ + VAGTL ETL A S++G + +KM R +RHA L+R LE KL+LA++K
Sbjct: 1179 ETYAQPTVAGTLGETLEANSKYGTKHDENHADKMARTIEAARHADLVRKLEWKLSLAQKK 1238
Query: 635 LKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIEN 694
++ A++ L KV+ +L P E ETIT+EERF+ RK+GL MK +LLLGRRG++DGTIEN
Sbjct: 1239 MEKAERVLGKVETALRPTEDSRPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIEN 1298
Query: 695 MHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVR 754
MHLHWKYRELVKI+VK KSFA VK+IA+SLEAESGG+LVS+DK KG AI+V+RGKNY R
Sbjct: 1299 MHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRR 1358
Query: 755 PLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
P LRP+NLL++R+ALARS+ELQR + L H L ++E +K+EL ++E
Sbjct: 1359 PSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKAELVQME 1408
>gi|242071513|ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
gi|241936876|gb|EES10021.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
Length = 895
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 308/573 (53%), Positives = 405/573 (70%), Gaps = 12/573 (2%)
Query: 240 RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFE 299
RS T +AE +P EL+RLR+ ++R+ RTKVG AG+T+ +V+ I EKWK +EVV++K
Sbjct: 164 RSPTWMAELTLPAAELRRLRHAAIRIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVS 223
Query: 300 EPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTN 359
+L M+ HEILER+TGGLVIWRSG+SV L+RG+ Y P +K N Q+ + +
Sbjct: 224 GTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVDYDEPETTKGSKKN--SQSLSMKS 281
Query: 360 EVMRNVGEHPPRSAMESYVPDSANNL-ENLSKEELMDLC-------ELNYLLDELGPRFK 411
+ + P + + V D L N KEE++ E++ LLDELGPR+
Sbjct: 282 PIKGSPNPPLPPTEKANSVQDRNGPLVSNAGKEEIVVQAPEIKYEDEIDKLLDELGPRYT 341
Query: 412 DWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGR 471
DWPG +PLPVDADLLP VP YKPP R+LPYG++P L +TT RRLAR PPHFALGR
Sbjct: 342 DWPGSDPLPVDADLLPATVPGYKPPFRVLPYGVRPSLSRMDTTNLRRLARGLPPHFALGR 401
Query: 472 NRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFY 531
+R+LQGLA AMVKLWEKS+IAK+A+KR V T +ERMAE++KKLTGG +L RN ++IVFY
Sbjct: 402 SRQLQGLANAMVKLWEKSSIAKVALKRGVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFY 461
Query: 532 RGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLA 591
RG DFL + + + ER +L QDEEE AR A++ A+ +V VAGTL ETL
Sbjct: 462 RGKDFLSSELAEVLLERERLAKSLQDEEE-ARRKAASYFSSSAEKYVQPTVAGTLGETLE 520
Query: 592 ATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDP 651
A S++G + +KM R +RHA L+R LE KL+LA++K++ A++ L KV+ +L P
Sbjct: 521 ANSKYGTKLDENHEDKMARTVEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRP 580
Query: 652 AELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKG 711
E S ETIT+EERF+ RK+GL MK +LLLGRRG++DGTIENMHLHWKYRELVKI+VK
Sbjct: 581 TE-DSRPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKA 639
Query: 712 KSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALA 771
KSFA VK+IA+SLEAESGG+LVS+DK KG AI+V+RGKNY RP LRP+NLL++R+ALA
Sbjct: 640 KSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALA 699
Query: 772 RSVELQRREGLKHHILDLQERIELVKSELEEIE 804
RS+ELQR + L H L ++ +K+EL ++E
Sbjct: 700 RSIELQRHQALSRHFAKLNRKVAQLKAELVQME 732
>gi|77551737|gb|ABA94534.1| CRS1/YhbY domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 886
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 306/579 (52%), Positives = 404/579 (69%), Gaps = 11/579 (1%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
R RS +AE +PE EL+RLR+ +R+ R KVG AG+T+ +V+ I ++W+ DEVV++
Sbjct: 163 RAARSKAWMAELTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERIRDRWRNDEVVRI 222
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQD 356
K +L M+ HEILER+TGGLVIWRSG+SV L+RG+AY +P T N QT
Sbjct: 223 KVTGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYDIPEPTKGTSKN--TQTLG 280
Query: 357 VTNEVMRNVGEHP-PRSAMESYVPDSANNLENLSKEELMDLC-------ELNYLLDELGP 408
+ + + G P + ++ + N K+ L++ E++ LLDELGP
Sbjct: 281 MKSSIKEPPGHSLLPNEKVNEMQDNNGALVSNAEKDTLVEPVPEIKYEDEIDKLLDELGP 340
Query: 409 RFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFA 468
R+ DWP +P PVDADLLP VP YKPP R+LPYG++P L +TT RRLAR PPHFA
Sbjct: 341 RYDDWPRPDPSPVDADLLPATVPGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFA 400
Query: 469 LGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYI 528
LGR+R+LQGLA AMVKLWEKS+IAKIA+KR V T +ERMAE++KKLTGG +L RN D++
Sbjct: 401 LGRSRQLQGLAAAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFM 460
Query: 529 VFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAE 588
VFYRG DFL P + + + ER + QDEE+ AR A++ + + V VAGTL E
Sbjct: 461 VFYRGKDFLSPELAEKLLERERWAKSLQDEEQ-ARLNAASSFSSRTEAPVEPTVAGTLGE 519
Query: 589 TLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQES 648
TL A S++G + KM R +RHA L+R LE KL LA++K++ A++ L KV+ +
Sbjct: 520 TLEANSKYGNKLDENYENKMTRTVEAARHADLVRKLEWKLQLAQKKIEKAERVLGKVETA 579
Query: 649 LDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKII 708
L P E ETIT+EERF+ RK+GL MK +LLLGRRG++DGTIENMHLHWKYRELVKI+
Sbjct: 580 LKPTEGIQPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIL 639
Query: 709 VKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQ 768
VK KSF VK+IA+SLEAESGG+LVS+DK KG AI+V+RGK+Y RP KLRP+NLL++R+
Sbjct: 640 VKAKSFGDVKKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRK 699
Query: 769 ALARSVELQRREGLKHHILDLQERIELVKSELEEIEGGK 807
ALARS+E+QRRE L HHI L R++ +K+EL ++EG K
Sbjct: 700 ALARSIEIQRREALSHHIATLNRRVKKLKAELLQMEGVK 738
>gi|297831030|ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
gi|297329237|gb|EFH59656.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
Length = 873
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 307/577 (53%), Positives = 412/577 (71%), Gaps = 17/577 (2%)
Query: 238 RRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLK 297
++ + LAE +PE EL+RLRN++ R + ++ AG+TQ VD+I EKWK E+V+LK
Sbjct: 207 KKENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGAGVTQVAVDAIKEKWKSAEIVRLK 266
Query: 298 FEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQ-- 355
E +L M++ HEILE++TGGLVIWRSG+S+ L+RG++Y+LP K N ++ +
Sbjct: 267 IEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPS----GKWNKQRREETP 322
Query: 356 -----DVTNEVMRNVGE-HPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPR 409
+ T V + G+ H P+ V S + S+ ++ E++ LLD LGPR
Sbjct: 323 PSSLPETTTMVDNSDGKVHLPQLEQ---VTTSVEKKDQTSQPDVEYEDEIDELLDGLGPR 379
Query: 410 FKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFAL 469
F DWPG PLPVDADLLP +P Y+PP R+LPYG++ L E T RRLAR PPHFAL
Sbjct: 380 FMDWPGDNPLPVDADLLPGAIPGYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFAL 439
Query: 470 GRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIV 529
GR+R+LQGLA AMV+LWEKS +AKIAIKR V +T +ERMAE+LKKLTGG LL RNKD++V
Sbjct: 440 GRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGILLSRNKDFLV 499
Query: 530 FYRGNDFLPPVVTDAVKERSKLTDIRQDEEERAR-HVASALIELKAKGFVGSLVAGTLAE 588
FYRG +FL V DA+ E+ + QDEEE+AR +SALI + + AGTL E
Sbjct: 500 FYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPCIEPPKKLVSAGTLGE 559
Query: 589 TLAATSRWGRQPSYED-VEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQE 647
TL AT +WG+ +D +++ ++ + RH +L+R LE+KLA A+RKL A++ LAKV+E
Sbjct: 560 TLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEE 619
Query: 648 SLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKI 707
L PAE D ++IT+EERF+ RK+GL MK +LLLGRRG++DGT+ENMHLHWKYRELVKI
Sbjct: 620 CLKPAEQREDPDSITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI 679
Query: 708 IVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRR 767
IVK K+F VK++A++LEAESGG+LVS+DK KG AIIVYRGK+Y RP LRP+NLLT+R
Sbjct: 680 IVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGKDYKRPTMLRPKNLLTKR 739
Query: 768 QALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
+ALARS+ELQRREGL HI +Q + E +++E+E++E
Sbjct: 740 KALARSIELQRREGLLKHISTMQAKAEQLRAEIEQME 776
>gi|326492672|dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/576 (52%), Positives = 400/576 (69%), Gaps = 27/576 (4%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
+AE +PE EL+RLR+ ++R+ +T+VG AG+T+ +V I EKW+ DEVV++K +L
Sbjct: 180 MAELTLPEPELRRLRHAAMRIKSKTQVGGAGVTREIVAKIKEKWRTDEVVRVKVNGTPAL 239
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
M+ HEILER+TGGLVIWRSG+SV L+RG+AY +P T + QDV M++
Sbjct: 240 NMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYDVPD----TTKGTNRTWQDVG---MKS 292
Query: 365 VGEHPPRSAMESYVPDSANN---------LENLSKEELMDLC-------ELNYLLDELGP 408
+ PP + S +P+ N + N KEE ++ E+ LLDELGP
Sbjct: 293 SIKGPP---IPSSIPNEKVNSMQGSNGGLVSNTEKEEAIETVPEIKYEEEIGRLLDELGP 349
Query: 409 RFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFA 468
R+ DWPG PLPVDADLLP +P YKPP R+LPYG++ L +TT RRLAR PPHFA
Sbjct: 350 RYSDWPGSNPLPVDADLLPATIPGYKPPFRVLPYGVRRSLSRKDTTNLRRLARGLPPHFA 409
Query: 469 LGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYI 528
LGR+R+LQGLA AMVKLWE+S+IAK+A+KR V T +ERMAE++KKLTGG +L RN D++
Sbjct: 410 LGRSRQLQGLAAAMVKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFV 469
Query: 529 VFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAE 588
VFYRG DFL + +A+ ER + QDEE+ AR A + F+ S VAGTL E
Sbjct: 470 VFYRGKDFLSTELAEALLERERSMKSLQDEEQ-ARLNAKLSFTSSTEAFIESTVAGTLGE 528
Query: 589 TLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQES 648
TL A S++G + V+KM R ++HA L+R LE KLALA++++ A++ L KV+ +
Sbjct: 529 TLEANSKYGNELVDNHVDKMTRTVEAAKHADLVRKLEWKLALAEKRIAKAERVLGKVETA 588
Query: 649 LDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKII 708
L P E ETIT+EERF+ RK+GL MK +LLLGRRG++DGTIENMHLHWKYRELVKI+
Sbjct: 589 LKPTEDTKPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIL 648
Query: 709 VKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQ 768
VK KSFA VK+ A+SLE ESGGVLVS+DK KG AI+V+RGK+Y RP LRP+NLL++R+
Sbjct: 649 VKAKSFADVKRTALSLEVESGGVLVSVDKVSKGYAIVVFRGKDYKRPSMLRPRNLLSKRK 708
Query: 769 ALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
ALARS+ELQR E L HI L R+ ++SEL ++E
Sbjct: 709 ALARSIELQRMEALGRHIEKLNRRVNQLRSELVQME 744
>gi|30686898|ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana]
gi|332643191|gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana]
Length = 881
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 302/570 (52%), Positives = 409/570 (71%), Gaps = 14/570 (2%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
LAE +PE EL+RLRN++ R + ++ G+TQ VD+I EKWK E+V+LK E +L
Sbjct: 216 LAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASAL 275
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
M++ HEILE++TGGLVIWRSG+S+ L+RG++Y+LP K N ++ + V+ N
Sbjct: 276 NMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPS----GKWNKQRREETPPEAVIEN 331
Query: 365 VGEHPP---RSAMESYVPDSANNLENLSKEE-----LMDLCELNYLLDELGPRFKDWPGR 416
E +S + ++P ++ K++ + EL+ LLD+LGPRF DWPG
Sbjct: 332 HDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELLDDLGPRFMDWPGD 391
Query: 417 EPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQ 476
PLPVDADLLP +PDY+PP R+LPYG++ L E T RRLAR PPHFALGR+R+LQ
Sbjct: 392 NPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQ 451
Query: 477 GLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDF 536
GLA AMV+LWEKS +AKIAIKR V +T +ERMAE+LKKLTGG +L RNKD++VFYRG +F
Sbjct: 452 GLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNF 511
Query: 537 LPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLV-AGTLAETLAATSR 595
L V DA+ E+ + QDEEE+AR S+ + + + LV AGTL ETL AT +
Sbjct: 512 LSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGK 571
Query: 596 WGRQPSYED-VEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAEL 654
WG+ +D +++ ++ + RH +L+R LE+KLA A+RKL A++ LAKV+ L PAE
Sbjct: 572 WGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQ 631
Query: 655 PSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSF 714
D E+IT+EERF+ RK+GL MK +LLLGRRG++DGT+ENMHLHWKYRELVKIIVK K+F
Sbjct: 632 REDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTF 691
Query: 715 AQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSV 774
VK++A++LEAESGG+LVS+DK KG AIIVYRG++Y RP LRP+NLLT+R+ALARS+
Sbjct: 692 DGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSI 751
Query: 775 ELQRREGLKHHILDLQERIELVKSELEEIE 804
ELQRREGL HI +Q + + +++E+E++E
Sbjct: 752 ELQRREGLLKHISTMQAKAKQLRAEIEQME 781
>gi|9294196|dbj|BAB02098.1| unnamed protein product [Arabidopsis thaliana]
Length = 850
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 302/577 (52%), Positives = 412/577 (71%), Gaps = 14/577 (2%)
Query: 238 RRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLK 297
++ + LAE +PE EL+RLRN++ R + ++ G+TQ VD+I EKWK E+V+LK
Sbjct: 178 KKENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLK 237
Query: 298 FEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDV 357
E +L M++ HEILE++TGGLVIWRSG+S+ L+RG++Y+LP K N ++ +
Sbjct: 238 IEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPS----GKWNKQRREETP 293
Query: 358 TNEVMRNVGEHPP---RSAMESYVPDSANNLENLSKEE-----LMDLCELNYLLDELGPR 409
V+ N E +S + ++P ++ K++ + EL+ LLD+LGPR
Sbjct: 294 PEAVIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELLDDLGPR 353
Query: 410 FKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFAL 469
F DWPG PLPVDADLLP +PDY+PP R+LPYG++ L E T RRLAR PPHFAL
Sbjct: 354 FMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFAL 413
Query: 470 GRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIV 529
GR+R+LQGLA AMV+LWEKS +AKIAIKR V +T +ERMAE+LKKLTGG +L RNKD++V
Sbjct: 414 GRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLV 473
Query: 530 FYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLV-AGTLAE 588
FYRG +FL V DA+ E+ + QDEEE+AR S+ + + + LV AGTL E
Sbjct: 474 FYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGE 533
Query: 589 TLAATSRWGRQPSYED-VEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQE 647
TL AT +WG+ +D +++ ++ + RH +L+R LE+KLA A+RKL A++ LAKV+
Sbjct: 534 TLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEV 593
Query: 648 SLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKI 707
L PAE D E+IT+EERF+ RK+GL MK +LLLGRRG++DGT+ENMHLHWKYRELVKI
Sbjct: 594 CLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI 653
Query: 708 IVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRR 767
IVK K+F VK++A++LEAESGG+LVS+DK KG AIIVYRG++Y RP LRP+NLLT+R
Sbjct: 654 IVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKR 713
Query: 768 QALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
+ALARS+ELQRREGL HI +Q + + +++E+E++E
Sbjct: 714 KALARSIELQRREGLLKHISTMQAKAKQLRAEIEQME 750
>gi|357156286|ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 881
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 302/601 (50%), Positives = 403/601 (67%), Gaps = 33/601 (5%)
Query: 229 LPWKR------NTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVD 282
PW+R R +S +AE +PE EL+RLR+ ++R+ R +VG AG+T+ +V
Sbjct: 143 FPWERPMPPPEAAARATKSPVWMAELTLPEAELRRLRHATMRIKSRIQVGGAGVTREIVA 202
Query: 283 SIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCV 342
I EKWK DEVV++K +L M+ HEILER+TGGLVIWRSG+SV L+RG+AY +P
Sbjct: 203 KIKEKWKTDEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYDVPET 262
Query: 343 QSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDS-ANNLEN--------LSKEEL 393
T N M++ PP M S +P+ N +++ EE
Sbjct: 263 TKGTNRNWQALG-------MKSSINIPP---MPSSLPNEKVNGMQDRVGALVAVTENEET 312
Query: 394 MDLC-------ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKP 446
+ E++ LLDELGPR+ DWPG PLPVDADLLP VP YKPP R+LPYG++
Sbjct: 313 AETVPEIKYEEEIDRLLDELGPRYSDWPGSNPLPVDADLLPATVPGYKPPFRVLPYGVRR 372
Query: 447 GLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNE 506
L +TT RRL R PPHFALGR+R+LQGLA AMVKLWE+S+IAKIA+KR V T +E
Sbjct: 373 SLSRKDTTNLRRLGRGLPPHFALGRSRQLQGLAAAMVKLWERSSIAKIALKRGVQLTTSE 432
Query: 507 RMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVA 566
RMAE+LKKLTGG +L RN D++VFYRG DFL + + + ER + QDEE+ AR
Sbjct: 433 RMAEDLKKLTGGVMLSRNNDFVVFYRGKDFLSSELAEVLLERERSMKSLQDEEQ-ARLDR 491
Query: 567 SALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQ 626
+ + F+ VAGTL ETL A S++G + ++KM + ++HA ++R LE
Sbjct: 492 TPSFASSTEAFIEPSVAGTLEETLEANSKYGNKVDENHMDKMTKTVEAAKHADVVRKLEW 551
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL+LA++++ A++ L KV+ +L P+E + ETIT EERF+ RK+GL MK +LLLGRRG
Sbjct: 552 KLSLAEKRIAKAERVLGKVETALKPSEDTNPHETITEEERFMFRKLGLRMKAFLLLGRRG 611
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
++DGTIENMHLHWKYRELVKI+VK KSF +VK+IA+SLE ESGG+LVS+DK KG AI+V
Sbjct: 612 VFDGTIENMHLHWKYRELVKILVKVKSFTEVKRIALSLEVESGGILVSVDKVSKGYAIVV 671
Query: 747 YRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIEGG 806
+RGK+Y RP LRP+NLL++R+ALARS+E+QR + L HI L R+ ++SEL +IEG
Sbjct: 672 FRGKDYRRPSMLRPRNLLSKRKALARSIEIQRMQALNRHIGKLNRRVNQLRSELVQIEGA 731
Query: 807 K 807
K
Sbjct: 732 K 732
>gi|222616258|gb|EEE52390.1| hypothetical protein OsJ_34482 [Oryza sativa Japonica Group]
Length = 560
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 295/554 (53%), Positives = 387/554 (69%), Gaps = 11/554 (1%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
R RS +AE +PE EL+RLR+ +R+ R KVG AG+T+ +V+ I ++W+ DEVV++
Sbjct: 9 RAARSKAWMAELTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERIRDRWRNDEVVRI 68
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQD 356
K +L M+ HEILER+TGGLVIWRSG+SV L+RG+AY +P T N QT
Sbjct: 69 KVTGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYDIPEPTKGTSKN--TQTLG 126
Query: 357 VTNEVMRNVGEHP-PRSAMESYVPDSANNLENLSKEELMDLC-------ELNYLLDELGP 408
+ + + G P + ++ + N K+ L++ E++ LLDELGP
Sbjct: 127 MKSSIKEPPGHSLLPNEKVNEMQDNNGALVSNAEKDTLVEPVPEIKYEDEIDKLLDELGP 186
Query: 409 RFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFA 468
R+ DWP +P PVDADLLP VP YKPP R+LPYG++P L +TT RRLAR PPHFA
Sbjct: 187 RYDDWPRPDPSPVDADLLPATVPGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFA 246
Query: 469 LGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYI 528
LGR+R+LQGLA AMVKLWEKS+IAKIA+KR V T +ERMAE++KKLTGG +L RN D++
Sbjct: 247 LGRSRQLQGLAAAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFM 306
Query: 529 VFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAE 588
VFYRG DFL P + + + ER + QDEE+ AR A++ + + V VAGTL E
Sbjct: 307 VFYRGKDFLSPELAEKLLERERWAKSLQDEEQ-ARLNAASSFSSRTEAPVEPTVAGTLGE 365
Query: 589 TLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQES 648
TL A S++G + KM R +RHA L+R LE KL LA++K++ A++ L KV+ +
Sbjct: 366 TLEANSKYGNKLDENYENKMTRTVEAARHADLVRKLEWKLQLAQKKIEKAERVLGKVETA 425
Query: 649 LDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKII 708
L P E ETIT+EERF+ RK+GL MK +LLLGRRG++DGTIENMHLHWKYRELVKI+
Sbjct: 426 LKPTEGIQPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIL 485
Query: 709 VKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQ 768
VK KSF VK+IA+SLEAESGG+LVS+DK KG AI+V+RGK+Y RP KLRP+NLL++R+
Sbjct: 486 VKAKSFGDVKKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRK 545
Query: 769 ALARSVELQRREGL 782
ALARS+E+QRRE L
Sbjct: 546 ALARSIEIQRREVL 559
>gi|334186525|ref|NP_193187.3| CRM family member 3B [Arabidopsis thaliana]
gi|332658053|gb|AEE83453.1| CRM family member 3B [Arabidopsis thaliana]
Length = 907
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/650 (46%), Positives = 412/650 (63%), Gaps = 66/650 (10%)
Query: 210 GSLNQKQIKGYHEVDDPSVLPWKRNTD------------RRRRSNTELAEKMIPEHELQR 257
G +++ G + +D PW++ + ++ S LAE + E EL R
Sbjct: 170 GGFSEESPFGVYGGNDEVKFPWEKVSSMEKKELVNGEWTAKKESRYSLAEMTLSEFELNR 229
Query: 258 LRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRT 317
LRN+ R + +V AG+TQA+VD+I EKWK E+V+LK E +L M+R HEILER+T
Sbjct: 230 LRNVMFRTKSKMRVTGAGVTQAVVDAIQEKWKGSEIVRLKIEGSSALNMRRMHEILERKT 289
Query: 318 GGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHP---PRSAM 374
GGLVIWRSG+S+ L+ ++ ++ + ++ +V R P P S +
Sbjct: 290 GGLVIWRSGTSIALY-----------NYKGGSNRDGSGNMNKQVYRRAERLPSSLPTSTV 338
Query: 375 ESYV-----------PDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDA 423
+ V P N + S +E+ E+N LL+ LGPR+ DW G PLPVDA
Sbjct: 339 DQSVQLVNLPQLEKEPTVVGNKDRTSPQEVEYEDEINELLEGLGPRYTDWQGGYPLPVDA 398
Query: 424 DLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMV 483
DLLP +VP Y+PP R LPYG++ L E T RR+A PPHFALGR+R+LQGLA AMV
Sbjct: 399 DLLPGIVPGYEPPFRALPYGVRSTLGTKEATSLRRIATVLPPHFALGRSRQLQGLATAMV 458
Query: 484 KLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTD 543
KLW+KS IAK+A+KR V T +ERMAE++K+LTGG LL RNKD++VFYRG FL V +
Sbjct: 459 KLWQKSLIAKVALKRGVQLTTSERMAEDIKRLTGGMLLSRNKDFLVFYRGKSFLSLEVGE 518
Query: 544 AVKERSKLTDIRQDEEERARHVA----------------------------SALIELKAK 575
A+ E+ L QDEEE+AR A SAL+ K
Sbjct: 519 ALMEKEMLVRTLQDEEEQARLRASSALVVPSIKANQQLARTLQDKEEQARPSALVLPSTK 578
Query: 576 GFVGSLVAGTLAETLAATSRWGRQPSYED-VEKMMRDSTLSRHASLLRYLEQKLALAKRK 634
+ AGTL ETL AT +WG+ +D VE+M ++ R A L+R LE+KLA A++K
Sbjct: 579 ANQNLVSAGTLGETLDATGKWGKNLDNDDHVEEMKQEVEKVRSAKLVRKLERKLAFAEKK 638
Query: 635 LKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIEN 694
L A++ALAKV+ESL PAE +DLE IT EERF+ +K+GL MK +LLLGRRG++DGT+EN
Sbjct: 639 LLKAERALAKVEESLKPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVEN 698
Query: 695 MHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVR 754
MHLHWKYREL+KI+VK K+ +++A++LEAESGG+LVS+DK KG A+IVYRGK+Y R
Sbjct: 699 MHLHWKYRELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKR 758
Query: 755 PLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
P LRP+NLLT+R+ALARS+ELQ+RE L HI +Q R E +++E+E++E
Sbjct: 759 PTTLRPKNLLTKRKALARSLELQKREALIKHIEAIQTRSEQLRAEIEQVE 808
>gi|297800788|ref|XP_002868278.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
gi|297314114|gb|EFH44537.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
Length = 919
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 304/619 (49%), Positives = 403/619 (65%), Gaps = 57/619 (9%)
Query: 238 RRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLK 297
++ S LAE+ + E EL RLRN+ R + +V AG+TQA+VD+I EKWK E+V+LK
Sbjct: 200 KKESRYSLAERTLSESELNRLRNVMFRTKSKMRVTGAGVTQAVVDAIQEKWKSSEIVRLK 259
Query: 298 FEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFR----------GMAYKLPCVQSFTK 347
E +L M+R HEILER+TGGLVIWRSG+S+ L+ G K ++ T
Sbjct: 260 IEGASALNMRRMHEILERKTGGLVIWRSGTSIALYNYKGGNNRDGSGNMNKQIYRRAETL 319
Query: 348 HNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELG 407
+ ++ ++ V H P+ E P N + S E+ E+N LL+ LG
Sbjct: 320 QSSLPTNTSTVDQSVQLV--HLPQLEKE---PTVVGNKDRTSPHEVEYEDEINELLEGLG 374
Query: 408 PRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHF 467
PR+ DW G PLPVDADLLP +VP Y+PP R+LPYG++ L E T RR+A PPHF
Sbjct: 375 PRYTDWQGGYPLPVDADLLPGIVPVYEPPFRVLPYGVRSTLGTKEATSLRRIATVLPPHF 434
Query: 468 ALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKK------------- 514
ALGR+R+LQGLA AMVKLW+KS IAK+A+KR V T +ERMAE++K
Sbjct: 435 ALGRSRQLQGLATAMVKLWQKSLIAKVALKRGVQLTTSERMAEDIKVIRIHIRVTFDCLI 494
Query: 515 LTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERAR-HVASALI--E 571
LTGG LL RNKD++VFYRG FL P V +A+ E+ +L QDEEE+AR +SAL+
Sbjct: 495 LTGGMLLSRNKDFLVFYRGKSFLSPEVAEALMEKERLVRTLQDEEEQARLRASSALVVPS 554
Query: 572 LKA-------------------------KGFVGSLVAGTLAETLAATSRWGRQPSYED-V 605
+KA K + AGTL ETL AT +WG+ +D V
Sbjct: 555 IKANQNLARTLQDEEKQSRPSTLVVPSTKANQNLVSAGTLGETLDATGKWGKSLDNDDHV 614
Query: 606 EKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEE 665
E+M ++ R A L+R LE+KLA A++KL A++ALAKV+ESL PAE +DLE IT EE
Sbjct: 615 EEMKQEVERMRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEEE 674
Query: 666 RFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLE 725
RF+ +K+GL MK +LLLGRRG++DGT+ENMHLHWKYREL+KI+VK KS K++A++LE
Sbjct: 675 RFMFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKSLEGAKKVAMALE 734
Query: 726 AESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHH 785
AESGG+LVS+DK KG A+IVYRGK+Y RP LRP+NLLT+R+ALARS+ELQ+RE L H
Sbjct: 735 AESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKREALIKH 794
Query: 786 ILDLQERIELVKSELEEIE 804
I +Q R E +++E+E++E
Sbjct: 795 IEAVQTRSEQLRAEIEQVE 813
>gi|2244807|emb|CAB10230.1| hypothetical protein [Arabidopsis thaliana]
gi|7268157|emb|CAB78493.1| hypothetical protein [Arabidopsis thaliana]
Length = 918
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 304/675 (45%), Positives = 412/675 (61%), Gaps = 91/675 (13%)
Query: 210 GSLNQKQIKGYHEVDDPSVLPWKRNTD------------RRRRSNTELAEKMIPEHELQR 257
G +++ G + +D PW++ + ++ S LAE + E EL R
Sbjct: 156 GGFSEESPFGVYGGNDEVKFPWEKVSSMEKKELVNGEWTAKKESRYSLAEMTLSEFELNR 215
Query: 258 LRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRT 317
LRN+ R + +V AG+TQA+VD+I EKWK E+V+LK E +L M+R HEILER+T
Sbjct: 216 LRNVMFRTKSKMRVTGAGVTQAVVDAIQEKWKGSEIVRLKIEGSSALNMRRMHEILERKT 275
Query: 318 GGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHP---PRSAM 374
GGLVIWRSG+S+ L+ ++ ++ + ++ +V R P P S +
Sbjct: 276 GGLVIWRSGTSIALY-----------NYKGGSNRDGSGNMNKQVYRRAERLPSSLPTSTV 324
Query: 375 ESYV-----------PDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDA 423
+ V P N + S +E+ E+N LL+ LGPR+ DW G PLPVDA
Sbjct: 325 DQSVQLVNLPQLEKEPTVVGNKDRTSPQEVEYEDEINELLEGLGPRYTDWQGGYPLPVDA 384
Query: 424 DLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMV 483
DLLP +VP Y+PP R LPYG++ L E T RR+A PPHFALGR+R+LQGLA AMV
Sbjct: 385 DLLPGIVPGYEPPFRALPYGVRSTLGTKEATSLRRIATVLPPHFALGRSRQLQGLATAMV 444
Query: 484 KLWEKSAIAKIAIKRDVMNTRNERMAEEL-------------------------KKLTGG 518
KLW+KS IAK+A+KR V T +ERMAE++ K+LTGG
Sbjct: 445 KLWQKSLIAKVALKRGVQLTTSERMAEDIKVIRFHSRVTFNCFYINVDIIRINDKRLTGG 504
Query: 519 TLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVA------------ 566
LL RNKD++VFYRG FL V +A+ E+ L QDEEE+AR A
Sbjct: 505 MLLSRNKDFLVFYRGKSFLSLEVGEALMEKEMLVRTLQDEEEQARLRASSALVVPSIKAN 564
Query: 567 ----------------SALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYED-VEKMM 609
SAL+ K + AGTL ETL AT +WG+ +D VE+M
Sbjct: 565 QQLARTLQDKEEQARPSALVLPSTKANQNLVSAGTLGETLDATGKWGKNLDNDDHVEEMK 624
Query: 610 RDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLL 669
++ R A L+R LE+KLA A++KL A++ALAKV+ESL PAE +DLE IT EERF+
Sbjct: 625 QEVEKVRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEEERFMF 684
Query: 670 RKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESG 729
+K+GL MK +LLLGRRG++DGT+ENMHLHWKYREL+KI+VK K+ +++A++LEAESG
Sbjct: 685 QKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKVAMALEAESG 744
Query: 730 GVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDL 789
G+LVS+DK KG A+IVYRGK+Y RP LRP+NLLT+R+ALARS+ELQ+RE L HI +
Sbjct: 745 GILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKREALIKHIEAI 804
Query: 790 QERIELVKSELEEIE 804
Q R E +++E+E++E
Sbjct: 805 QTRSEQLRAEIEQVE 819
>gi|297734212|emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 293/594 (49%), Positives = 381/594 (64%), Gaps = 20/594 (3%)
Query: 222 EVDDPSVLPWKRNTD-----------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTK 270
E +D +LPW+R + RR LAE I + EL+RLR + + + ER
Sbjct: 175 EDEDDMILPWERGEERQEEEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERIN 234
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
V AGITQA++ IHEKW+ +E+V+LKF E + MK HEI+ERRTGGLV WRSGS +V
Sbjct: 235 VPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMV 294
Query: 331 LFRGMAYKLPC----VQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLE 386
+FRG Y+ P V V N MRN P S + + E
Sbjct: 295 VFRGTNYEGPPKPQPVDGEGDSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPVRNPVHAE 354
Query: 387 NLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKP 446
N+++EE E N LLD LGPRF DW G LPVD DLLP +P YK PLR+LP G++P
Sbjct: 355 NMTEEE----AEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRP 410
Query: 447 GLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNE 506
L + E T R+LA+ P HFALGRNR QGLA A++KLWEKS + KIA+K + NT N+
Sbjct: 411 RLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNK 470
Query: 507 RMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVA 566
MAEE+K LTGG LL RNK YIV YRG DFLP V A+ ER +LT Q EE+ R
Sbjct: 471 LMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEKVRTGG 530
Query: 567 SALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQ 626
+ I G VG +AGTLAE A +RWGR+ S E+ EKM+ +++ ++ A +++ +E
Sbjct: 531 AEAIPSGEDG-VGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEH 589
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KLALA+ K A++ LAK++ S+ PA D ETIT+EERF+ R++GL MK YLLLG RG
Sbjct: 590 KLALAQAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRG 649
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
++DG IENMHLHWK+RELVK+I K K+ A V+ A LE ESGG+LV++++ PKG A+I
Sbjct: 650 VFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIY 709
Query: 747 YRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
YRGKNY RP+ LRP+NLLT+ +AL RSV +QR E L HI +L+ IE +K E+
Sbjct: 710 YRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEI 763
>gi|147815878|emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
Length = 850
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 292/594 (49%), Positives = 380/594 (63%), Gaps = 20/594 (3%)
Query: 222 EVDDPSVLPWKRNTD-----------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTK 270
E +D +LPW+R + RR LAE I + EL+RLR + + + ER
Sbjct: 175 EDEDDMILPWERGEERQEEEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERIN 234
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
V AGITQA++ IHEKW+ +E+V+LKF E + MK HEI+ERRTGGLV WRSGS +V
Sbjct: 235 VPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMV 294
Query: 331 LFRGMAYKLPC----VQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLE 386
+FRG Y+ P V V N MRN P S + + E
Sbjct: 295 VFRGTNYEGPPKPQPVDGEGDSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPVRNPVHAE 354
Query: 387 NLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKP 446
N+++EE E N LLD LGPRF DW G LPVD DLLP +P YK PLR+LP G++P
Sbjct: 355 NMTEEE----AEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTGMRP 410
Query: 447 GLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNE 506
L + E T R+LA+ P HFALGRNR QGLA A++KLWEKS + KIA+K + NT N+
Sbjct: 411 RLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNTNNK 470
Query: 507 RMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVA 566
MAEE+K LTGG LL RNK YIV YRG DFLP V A+ ER +LT Q EE+ R
Sbjct: 471 LMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEKVRTGG 530
Query: 567 SALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQ 626
+ I G VG +AGTLAE A +RWGR+ S E+ EKM+ +++ ++ A +++ +E
Sbjct: 531 AEAIPSGEDG-VGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEH 589
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KLALA+ K ++ LAK++ S+ PA D ETIT+EERF+ R++GL MK YLLLG RG
Sbjct: 590 KLALAQAKKLRPERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRG 649
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
++DG IENMHLHWK+RELVK+I K K+ A V+ A LE ESGG+LV++++ PKG A+I
Sbjct: 650 VFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIY 709
Query: 747 YRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
YRGKNY RP+ LRP+NLLT+ +AL RSV +QR E L HI +L+ IE +K E+
Sbjct: 710 YRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEI 763
>gi|224118814|ref|XP_002317913.1| predicted protein [Populus trichocarpa]
gi|222858586|gb|EEE96133.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 289/595 (48%), Positives = 388/595 (65%), Gaps = 26/595 (4%)
Query: 225 DPSVLPWKRN------------TDRRRRSNT-ELAEKMIPEHELQRLRNISLRMLERTKV 271
D SVLPW+R + R+RR LAE I + EL+RLR + + + ER +
Sbjct: 163 DESVLPWEREERGAVEMEGGIESGRKRRGKAPTLAELTIEDEELRRLRRMGMFIRERISI 222
Query: 272 GSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVL 331
AGIT A++++IH++W+ +E+V+LKF E + MK HEI+ERRTGGLVIWR+GS +V+
Sbjct: 223 PKAGITNAVLENIHDRWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRAGSVMVV 282
Query: 332 FRGMAYKLPC--VQSFTKHNHTQQTQDV--TNEVMRNVGEHPPRSAMES-YVPDSANNLE 386
FRG Y+ P +Q + DV T+ VM S+ +S V E
Sbjct: 283 FRGTNYQGPPSKLQPADREGDALFVPDVSSTDSVMTRSSNIATSSSEKSKLVMRITEPTE 342
Query: 387 NLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKP 446
N+++EE ELN LLD+LGPRF++W G LPVDADLLPP VP YK P RLLP G++
Sbjct: 343 NMTEEE----AELNSLLDDLGPRFEEWWGTGLLPVDADLLPPKVPCYKTPFRLLPVGMRA 398
Query: 447 GLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNE 506
L + E T R+LA+ P HFALGRNR QGLA A++KLWEKS +AKIA+KR + NT N+
Sbjct: 399 RLTNAEMTNMRKLAKALPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNK 458
Query: 507 RMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVA 566
MA+ELK LTGG LL RNK YIV +RG DFLP V A+ ER ++T QD EER R
Sbjct: 459 LMADELKMLTGGVLLLRNKYYIVIFRGKDFLPQSVAAALAERQEVTKQIQDVEERVR--- 515
Query: 567 SALIELKAKG-FVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLE 625
S +E G G +AGTLAE A +RWGR S E+ EKM+ +++ ++ A L++ E
Sbjct: 516 SNSVEAAPSGEDEGKALAGTLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTE 575
Query: 626 QKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRR 685
KLA+A+ K A+ L+K++ ++ P+ D ETI+ EER + R++GL MK YL LG R
Sbjct: 576 HKLAIAQAKKLRAESLLSKIETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIR 635
Query: 686 GIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAII 745
G++DG IENMHLHWK+RELVK+I K K+ A V+ A LE ESGGVLV++++ PKG A+I
Sbjct: 636 GVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKGFALI 695
Query: 746 VYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
YRGKNY RP+ +RP+NLLT+ +AL RSV +QR E L HI +L++ IE + E+
Sbjct: 696 YYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIFELEKNIEEMVKEM 750
>gi|357128578|ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/603 (45%), Positives = 380/603 (63%), Gaps = 39/603 (6%)
Query: 225 DPSVLPWKRNTD-------------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKV 271
D +VLPW+R+ D R+R LAE + + EL+RLR + + + +R V
Sbjct: 142 DQAVLPWERDQDTDGGMDEEEGGAKRKRVKAPSLAELTMDDAELRRLRGMGMTLRDRITV 201
Query: 272 GSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVL 331
AG+TQA+ + IH+ W+ E+V+LKF E + MK HE++ERRTGGL+IWR+GS +V+
Sbjct: 202 PKAGVTQAVTEKIHDAWRKSELVRLKFHEDLANDMKTAHELVERRTGGLIIWRAGSVMVV 261
Query: 332 FRGMAYKLPC-VQSFTKHNHTQQTQDVT-------------NEVMRNVGEHPPRSAMESY 377
+RG Y P Q+ + T++ +D T N+ +H S +
Sbjct: 262 YRGNNYTRPTKSQTLDGTSSTRKGEDNTLFIPDASSPAENDNQGKDLTAQHDNLSRL--- 318
Query: 378 VPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPL 437
+ +N +++++EEL E N +LDELGPRF DW G LPVDADLLP +P YK P
Sbjct: 319 ---NIHNTDDMTEEEL----EFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKAPF 371
Query: 438 RLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIK 497
RLLP G++ L + E T R+LAR P HFALGRNR QGLA A++KLWEKS + KIA+K
Sbjct: 372 RLLPTGMRTSLTNAELTNLRKLARSLPCHFALGRNRNHQGLASAIIKLWEKSLVVKIAVK 431
Query: 498 RDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQD 557
R + NT NE M++E+KKLTGGTLL RNK +IV YRG DFLP V A+ ER +LT Q+
Sbjct: 432 RGIQNTNNELMSDEIKKLTGGTLLLRNKYFIVIYRGKDFLPQSVAVALAEREELTKDIQN 491
Query: 558 EEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRH 617
EE+ R + + GF G + GTLAE A +RWGR + ++ E+M S+
Sbjct: 492 VEEQRR--CTPIAHSPEDGFDGHALVGTLAEFQEAQARWGRDVTSKEQEEMKEASSRLEK 549
Query: 618 ASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMK 677
+ R LE KL++A+ K+ A K L+K++ S+ A D E IT+EER + R++GL MK
Sbjct: 550 EKIFRRLEHKLSIAQAKIHRAGKLLSKIEASMILANPSDDREMITDEERSVFRRIGLKMK 609
Query: 678 PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDK 737
YL +G RG++DG IENMHLHWK+RE+VK+I K K+ A V + A LE ESGG+LV++++
Sbjct: 610 AYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAFVNETARLLEYESGGILVAVER 669
Query: 738 TPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVK 797
PKG A+I YRGKNY RP+ +RP+NLLT+ +AL R+V +QR E L HI L+ ++ +K
Sbjct: 670 VPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAQLESNMKQMK 729
Query: 798 SEL 800
+L
Sbjct: 730 FDL 732
>gi|125553229|gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
Length = 801
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 274/597 (45%), Positives = 378/597 (63%), Gaps = 28/597 (4%)
Query: 225 DPSVLPWKRNTDRRRRSNTE------------LAEKMIPEHELQRLRNISLRMLERTKVG 272
D SVLPW+R+ R R N E LAE I + EL+RLR + + + +R V
Sbjct: 151 DESVLPWERDEVARGRENEEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVP 210
Query: 273 SAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLF 332
AG+TQA+ + IH+ W+ E+V+LKF E + MK HE++ERRTGGL+IWRSGS +V++
Sbjct: 211 KAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVY 270
Query: 333 RGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPP---------RSAMESYVPDSAN 383
RG YK P ++S T ++ + + P + E +
Sbjct: 271 RGSNYKRP-LKSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQREIAARLNMQ 329
Query: 384 NLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYG 443
N E++++EEL E N +LDELGPRF DW G LPVDADLLP +P YK P RLLP G
Sbjct: 330 NTEDMTEEEL----EFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTG 385
Query: 444 IKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 503
++ L + E T R+LAR P HFALGRNR QGLA A+VKLWEKS + KIA+KR + NT
Sbjct: 386 MRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNT 445
Query: 504 RNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERAR 563
N+ M+EE+K LTGGTLL RNK YIV YRG DFLP V A+ ER +LT Q+ EE+ R
Sbjct: 446 NNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKR 505
Query: 564 HVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY 623
+ ++ G +AGTLAE A +RWGR+ + ++ E+M S+ S L +
Sbjct: 506 CIP--VVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKR 563
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
LE KL++A+ K+ A++ L+K++ S+ A D E IT+EER + R++GL +K YL +G
Sbjct: 564 LEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVG 623
Query: 684 RRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIA 743
RG++DG IENMHLHWK+RE+VK+I K K+ V++ A LE ESGG+LV++++ PKG A
Sbjct: 624 IRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESGGILVAIERVPKGYA 683
Query: 744 IIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
+I YRGKNY RP+ +RP+NLLT+ +AL R+V +QR E L HI +L+ I +K +L
Sbjct: 684 LIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAELENNIRQMKLDL 740
>gi|326507446|dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 775
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/595 (45%), Positives = 381/595 (64%), Gaps = 26/595 (4%)
Query: 225 DPSVLPWKRNTD----------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSA 274
D +VLPW+R+ + R+R LAE + + EL+RLR + + + +R V A
Sbjct: 142 DEAVLPWERDRESDGEEVDGVKRKRVRAPSLAELTMDDVELRRLRGMGMTLKDRITVPKA 201
Query: 275 GITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRG 334
G+TQA+ + IH+ W+ E+V+LKF E H+ MK HE++ERRTGGL+IWR+GS +V++RG
Sbjct: 202 GVTQAITEKIHDAWRKSELVRLKFHEDHANDMKTAHELVERRTGGLIIWRAGSVMVVYRG 261
Query: 335 MAYKLPC-VQSFTKHNHTQQTQDVT------NEVMRNVGEHPPRSAMESYVPD-SANNLE 386
Y P Q+ + ++ +D + + N + +A P +N E
Sbjct: 262 SNYTRPLKSQTLDGTSSPRKQEDSALFIPNGSSTVENDNQGKDLAAQHDNAPILDLHNTE 321
Query: 387 NLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKP 446
++++EEL E N +LDELGPRF DW G LPVDADLLP +P YK P R+LP G++
Sbjct: 322 DMTEEEL----EFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKAPFRVLPTGMRT 377
Query: 447 GLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNE 506
L + E T R+LAR P HFALGRNR QGLA A+VKLWEKS + KIA+KR + NT N+
Sbjct: 378 SLTNSELTNLRKLARNLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNK 437
Query: 507 RMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVA 566
M++E+K LTGGTLL RNK YIV YRG DFLP V A+ ER +LT Q+ EE+ R ++
Sbjct: 438 LMSDEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNLEEQRRSIS 497
Query: 567 SALIELKAK-GFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLE 625
IE + GF G + GTLAE A +RWGR + ++ ++M S S L R LE
Sbjct: 498 ---IEHSPEDGFEGHALVGTLAEFQEAQARWGRNVTSKEQQEMKEASFRSEKEKLFRRLE 554
Query: 626 QKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRR 685
KL++A+ K+ A K L+K++ S+ A D E IT EER + R++GL MK YL +G R
Sbjct: 555 HKLSIAQAKIHRAGKLLSKIEASMVLANPSDDREMITAEERSVFRRIGLKMKAYLPVGIR 614
Query: 686 GIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAII 745
G++DG IENMHLHWK+RE+VK+I K K+ A V++ A LE ESGG+LV++++ PKG A+I
Sbjct: 615 GVFDGVIENMHLHWKHREVVKLITKQKTLAFVEETARLLEYESGGILVAIERVPKGHALI 674
Query: 746 VYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
YRGKNY RP+ +RP+NLLT+ +AL R+V +QR E L HI L+ ++ +K +L
Sbjct: 675 FYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIDQLEINMKQMKRDL 729
>gi|297830494|ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
Length = 846
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/598 (45%), Positives = 381/598 (63%), Gaps = 34/598 (5%)
Query: 228 VLPWKRNTDRRRRSNTE-----------------LAEKMIPEHELQRLRNISLRMLERTK 270
+LPW++N + + E LAE + + EL+RLR + + R
Sbjct: 204 LLPWEKNEEEQAAERVEGEGGVAVMKKGRARAPSLAELTVEDSELRRLRRDGMYLRVRIN 263
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+ AG+TQA+++ I++ W+ +E+V+LKF E + MK HEI+ERRTGG+VIWR+GS +V
Sbjct: 264 IPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGGMVIWRAGSVMV 323
Query: 331 LFRGMAYKLPCVQS--FTKHNHTQQTQDVT---NEVMRNVGEHPPRSAMESYVPDSANNL 385
++RG+ YK P V S T DV+ +E P S ++ + +
Sbjct: 324 VYRGLDYKGPPVISNQMAGPKETLFVPDVSSAGDEATNAKDNQSPPSEIKDPIIKNPIRK 383
Query: 386 ENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIK 445
EN+++EE E N LLD LGPRF++W G LPVDADLLPP +P YK P RLLP G++
Sbjct: 384 ENMTEEE----AEFNSLLDSLGPRFQEWWGTGVLPVDADLLPPTIPGYKTPFRLLPTGMR 439
Query: 446 PGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRN 505
L + E T R++ + P HFALGRNR QGLA A++++WEKS IAKIA+KR + NT N
Sbjct: 440 SNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTNN 499
Query: 506 ERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHV 565
+ MA+E+K LTGG LL RNK YIV YRG DFLP V + ER +LT QD EER R+
Sbjct: 500 KLMADEVKALTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAERQELTKEIQDVEERVRNR 559
Query: 566 ASALIELKAKGFVGSLV---AGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLR 622
E++A VG V AGTLAE A +RWG++ + + EKM+ +++ +A +++
Sbjct: 560 -----EIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVK 614
Query: 623 YLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLL 682
++ KL LA+ K + A+K L+K++ S+ P D E I+ EER + RK+GL MK YL L
Sbjct: 615 RIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPL 674
Query: 683 GRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGI 742
G RG++DG IENMHLHWK+RELVK+I K K+ A V+ A LE ESGGVLV+++K PKG
Sbjct: 675 GIRGVFDGVIENMHLHWKHRELVKLISKQKNLAFVEDTARLLEYESGGVLVAIEKVPKGF 734
Query: 743 AIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
A+I YRGKNY RP+ LRP+NLLT+ +AL RS+ +QR E L HI +L+ IE ++SEL
Sbjct: 735 ALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSEL 792
>gi|47900539|gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 798
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 273/597 (45%), Positives = 377/597 (63%), Gaps = 28/597 (4%)
Query: 225 DPSVLPWKRNTDRRRRSNTE------------LAEKMIPEHELQRLRNISLRMLERTKVG 272
D SVLPW+R+ R R N E LAE I + EL+RLR + + + +R V
Sbjct: 148 DESVLPWERDEVARGRENEEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVP 207
Query: 273 SAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLF 332
AG+TQA+ + IH+ W+ E+V+LKF E + MK HE++ERRTGGL+IWRSGS +V++
Sbjct: 208 KAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVY 267
Query: 333 RGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPP---------RSAMESYVPDSAN 383
RG YK P ++S T ++ + + P + E +
Sbjct: 268 RGSNYKRP-LKSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQREIAARLNMQ 326
Query: 384 NLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYG 443
N E++++EEL E N +LDELGPRF DW G LPVDADLLP +P YK P RLLP G
Sbjct: 327 NTEDMTEEEL----EFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTG 382
Query: 444 IKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 503
++ L + E T R+LAR P HFALGRNR QGLA A+VKLWEKS + KIA+KR + NT
Sbjct: 383 MRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNT 442
Query: 504 RNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERAR 563
N+ M+EE+K LTGGTLL RNK YIV YRG DFLP V A+ ER +LT Q+ EE+ R
Sbjct: 443 NNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKR 502
Query: 564 HVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY 623
+ ++ G +AGTLAE A +RWGR+ + ++ E+M S+ S L +
Sbjct: 503 CIP--VVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKR 560
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
LE KL++A+ K+ A++ L+K++ S+ A D E IT+EER + R++GL +K YL +G
Sbjct: 561 LEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVG 620
Query: 684 RRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIA 743
RG++DG IENMHLHWK+RE+VK+I K K+ V++ A LE ESGG+LV++++ KG A
Sbjct: 621 IRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESGGILVAIERVTKGYA 680
Query: 744 IIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
+I YRGKNY RP+ +RP+NLLT+ +AL R+V +QR E L HI +L+ I +K +L
Sbjct: 681 LIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAELENNIRQMKLDL 737
>gi|15229636|ref|NP_188468.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|11994102|dbj|BAB01105.1| unnamed protein product [Arabidopsis thaliana]
gi|17380904|gb|AAL36264.1| unknown protein [Arabidopsis thaliana]
gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 848
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/598 (45%), Positives = 384/598 (64%), Gaps = 34/598 (5%)
Query: 228 VLPWKRNTD-----------------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTK 270
+LPW++N + +RR LAE + + EL+RLR + + R
Sbjct: 204 LLPWEKNEEEQAAERVVGEGGVAVMQKRRARAPSLAELTVEDSELRRLRRDGMYLRVRIN 263
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+ AG+TQA+++ I++ W+ +E+V+LKF E + MK HEI+ERRTGG+VIWR+GS +V
Sbjct: 264 IPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGGMVIWRAGSVMV 323
Query: 331 LFRGMAYKLPCVQS--FTKHNHTQQTQDVTNEVMRNVGEHPPRSA---MESYVPDSANNL 385
++RG+ YK P V S T DV++ +SA ++ + +
Sbjct: 324 VYRGLDYKGPPVISNQMAGPKETLFVPDVSSAGDEATNAKDNQSAPLVIKDPIIKNPIRK 383
Query: 386 ENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIK 445
EN+++EE+ E N LLD LGPRF++W G LPVDADLLPP +P YK P RLLP G++
Sbjct: 384 ENMTEEEV----EFNSLLDSLGPRFQEWWGTGVLPVDADLLPPTIPGYKTPFRLLPTGMR 439
Query: 446 PGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRN 505
L + E T R++ + P HFALGRNR QGLA A++++WEKS IAKIA+KR + NT N
Sbjct: 440 SNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTNN 499
Query: 506 ERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHV 565
+ MA+E+K LTGG LL RNK YIV YRG DFLP V + ER +LT QD EER R+
Sbjct: 500 KLMADEVKTLTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAERQELTKEIQDVEERVRNR 559
Query: 566 ASALIELKAKGFVGSLV---AGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLR 622
E++A VG V AGTLAE A +RWG++ + + EKM+ +++ +A +++
Sbjct: 560 -----EIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVK 614
Query: 623 YLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLL 682
++ KL LA+ K + A+K L+K++ S+ P D E I+ EER + RK+GL MK YL +
Sbjct: 615 RIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPI 674
Query: 683 GRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGI 742
G RG++DG IENMHLHWK+RELVK+I K K+ A V++ A LE ESGGVLV+++K PKG
Sbjct: 675 GIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETARLLEYESGGVLVAIEKVPKGF 734
Query: 743 AIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
A+I YRGKNY RP+ LRP+NLLT+ +AL RS+ +QR E L HI +L+ IE ++S+L
Sbjct: 735 ALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSQL 792
>gi|255582755|ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
gi|223528164|gb|EEF30228.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/541 (49%), Positives = 362/541 (66%), Gaps = 11/541 (2%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
LAE I + EL+RLR + + + ER V AG+T+ +V+ IH+KW+ +E+V+LKF E +
Sbjct: 205 LAELTIEDEELRRLRRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAH 264
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC--VQSFTKHNHTQQTQDVTN--- 359
MK HEI ERRTGGLVIWR+GS +V++RG +Y+ P Q + DV++
Sbjct: 265 DMKTAHEITERRTGGLVIWRAGSVMVVYRGSSYEGPPSKTQPVNREGDALFIPDVSSAGS 324
Query: 360 EVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPL 419
E M+ P + ++ +++++EE+ E + LD LGPRF++W G L
Sbjct: 325 ETMKGDNVAPSAAEKRELAMRRLDHSKDMTEEEI----EYDSFLDSLGPRFEEWWGTGIL 380
Query: 420 PVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLA 479
PVDADLLPP +PDYK P RLLP G++ L + E T R+LA+K P HFALGRNR QGLA
Sbjct: 381 PVDADLLPPKIPDYKTPFRLLPTGMRSRLTNAEMTNLRKLAKKLPCHFALGRNRNHQGLA 440
Query: 480 KAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPP 539
++K+WEKS +AKIA+KR + NT N+ MA+ELK LTGG LL RNK YIV YRG DFLP
Sbjct: 441 STILKVWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVIYRGKDFLPT 500
Query: 540 VVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQ 599
V A+ ER +LT QD EE+ R + + + +K G +AGTLAE A SRWG+
Sbjct: 501 SVAAALTERQELTKKIQDVEEKVR--SREIEAVPSKEEEGKPLAGTLAEFYEAQSRWGKD 558
Query: 600 PSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLE 659
S ED EKM+ D T ++ A +++ +E KLA+A+ K A++ LAK++ S+ P+ D E
Sbjct: 559 TSAEDREKMIEDDTRAKRARIVKRIEHKLAVAQAKKLRAERLLAKIEVSMLPSGPDYDQE 618
Query: 660 TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQ 719
TIT+EER + R++GL MK YL LG RG++DG IENMHLHWK+RELVK+I K K+ A +
Sbjct: 619 TITDEERAVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFAED 678
Query: 720 IAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRR 779
A LE ESGG+LV++++ PKG A+I YRGKNY RP+ LRP+NLLT+ +AL RSV +QR
Sbjct: 679 TARLLEYESGGILVAIERVPKGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQRH 738
Query: 780 E 780
E
Sbjct: 739 E 739
>gi|296087726|emb|CBI34982.3| unnamed protein product [Vitis vinifera]
Length = 1028
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 279/585 (47%), Positives = 370/585 (63%), Gaps = 49/585 (8%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
LAE +PE EL+RL+ I +++ ++ KVG AGIT+ +V+ IHE+W+ EVVK++ E+ L
Sbjct: 181 LAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKL 240
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
MKRTH+ILER+TGGLVIWRSGS ++L+RG YK P S + ++ M N
Sbjct: 241 NMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNN 300
Query: 365 VGEHPPRSA-------MESYVPDSANNLENLS-----------KEELMDLCEL----NYL 402
EH + ++S P AN + LS + +L +L + L
Sbjct: 301 -EEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRL 359
Query: 403 LDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARK 462
LD LGPRF DW G +PLP+DADLLP VVP Y+ P RLLPYG+KP L + E T RRL R
Sbjct: 360 LDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRP 419
Query: 463 TPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLC 522
P HFALGRNR+LQGLA +M+KLWEK IAKIA+KR V NT +E MAEELK LTGGTLL
Sbjct: 420 LPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLS 479
Query: 523 RNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLV 582
R++++IVFYRG DFLPP V+ A++ R K I + +++ H +
Sbjct: 480 RDREFIVFYRGKDFLPPAVSSAIEARRKY-GIHRGKQKIDHH----------------RL 522
Query: 583 AGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQ-------KLALAKRKL 635
A E+ TS + + +S R +LR E KL++A K
Sbjct: 523 AINAEESELGTSEHASDKDCDGTDDQKTNSLSKRR--MLRSAEAVVERTNIKLSMALEKK 580
Query: 636 KMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENM 695
+ A+K LA+++E+ P + D E IT EER++LRK+GL MKP+LLLGRRGI+DGT+ENM
Sbjct: 581 ERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENM 640
Query: 696 HLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
HLHWKYRELVKII G+S + +A +LEAESGG+LV++++ KG AII+YRGKNY RP
Sbjct: 641 HLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRP 700
Query: 756 LKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
LRPQ LL +R+AL RS+E QRRE LK H+L L I+ +K +L
Sbjct: 701 ASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQL 745
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 653 ELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVK 710
E+P ++N ER LLRK L MK P + +GR I G + + H++ L + VK
Sbjct: 891 EMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVK 950
Query: 711 GKS-FAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
G++ V+++ LE +G VLVS + + +I+YRG
Sbjct: 951 GRAKGTSVQEVIFKLEQATGAVLVSQEPS----KVILYRG 986
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 244 ELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL-----KF 298
E+ ++ I E E LR + LRM +G GI V+++H WK E+VK+
Sbjct: 600 EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSI 659
Query: 299 EEPHSLQMKRTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPC 341
E+ H + RT LE +GG+++ G +++++RG YK P
Sbjct: 660 EDIHGVA--RT---LEAESGGILVAVERVSKGYAIIMYRGKNYKRPA 701
>gi|225452572|ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1044
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 279/585 (47%), Positives = 370/585 (63%), Gaps = 49/585 (8%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
LAE +PE EL+RL+ I +++ ++ KVG AGIT+ +V+ IHE+W+ EVVK++ E+ L
Sbjct: 181 LAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKL 240
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
MKRTH+ILER+TGGLVIWRSGS ++L+RG YK P S + ++ M N
Sbjct: 241 NMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNN 300
Query: 365 VGEHPPRSA-------MESYVPDSANNLENLS-----------KEELMDLCEL----NYL 402
EH + ++S P AN + LS + +L +L + L
Sbjct: 301 E-EHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRL 359
Query: 403 LDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARK 462
LD LGPRF DW G +PLP+DADLLP VVP Y+ P RLLPYG+KP L + E T RRL R
Sbjct: 360 LDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRP 419
Query: 463 TPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLC 522
P HFALGRNR+LQGLA +M+KLWEK IAKIA+KR V NT +E MAEELK LTGGTLL
Sbjct: 420 LPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLS 479
Query: 523 RNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLV 582
R++++IVFYRG DFLPP V+ A++ R K I + +++ H +
Sbjct: 480 RDREFIVFYRGKDFLPPAVSSAIEARRKY-GIHRGKQKIDHH----------------RL 522
Query: 583 AGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQ-------KLALAKRKL 635
A E+ TS + + +S R +LR E KL++A K
Sbjct: 523 AINAEESELGTSEHASDKDCDGTDDQKTNSLSKRR--MLRSAEAVVERTNIKLSMALEKK 580
Query: 636 KMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENM 695
+ A+K LA+++E+ P + D E IT EER++LRK+GL MKP+LLLGRRGI+DGT+ENM
Sbjct: 581 ERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENM 640
Query: 696 HLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
HLHWKYRELVKII G+S + +A +LEAESGG+LV++++ KG AII+YRGKNY RP
Sbjct: 641 HLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRP 700
Query: 756 LKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
LRPQ LL +R+AL RS+E QRRE LK H+L L I+ +K +L
Sbjct: 701 ASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQL 745
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 653 ELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVK 710
E+P ++N ER LLRK L MK P + +GR I G + + H++ L + VK
Sbjct: 891 EMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVK 950
Query: 711 GKS-FAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
G++ V+++ LE +G VLVS + + +I+YRG
Sbjct: 951 GRAKGTSVQEVIFKLEQATGAVLVSQEPS----KVILYRG 986
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 244 ELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL-----KF 298
E+ ++ I E E LR + LRM +G GI V+++H WK E+VK+
Sbjct: 600 EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSI 659
Query: 299 EEPHSLQMKRTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPC 341
E+ H + RT LE +GG+++ G +++++RG YK P
Sbjct: 660 EDIHGVA--RT---LEAESGGILVAVERVSKGYAIIMYRGKNYKRPA 701
>gi|356527819|ref|XP_003532504.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 719
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/591 (46%), Positives = 369/591 (62%), Gaps = 48/591 (8%)
Query: 225 DPSVLPWKRNTD---------------RRRRSNTELAEKMIPEHELQRLRNISLRMLERT 269
D ++ PW + + ++ + + LAE+ + E EL+RLR + + + E+
Sbjct: 104 DQALFPWDKGQEEDAEEPGEQQKEMLKKKNVNASTLAEQTLVEEELRRLRTLGMSLKEKI 163
Query: 270 KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 329
+ AG+T+A++D IH W E+V+LKF E + MK H+I+E RT GLVIWRSGS +
Sbjct: 164 TIPKAGLTRAVLDRIHRHWSNCELVRLKFHEFLAQNMKLAHQIVEHRTRGLVIWRSGSYM 223
Query: 330 VLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLS 389
++RG Y+ P + T +E + GE N++
Sbjct: 224 WVYRGKNYQGPV--------ESDATSMEKSEAVWWKGE-------------------NMT 256
Query: 390 KEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLR 449
EE E N +LD GPRF +W G LPVDAD LPP+VP YK PLRLLP G++P L
Sbjct: 257 PEE----AEFNRMLDGFGPRFVEWWGTGILPVDADSLPPMVPGYKTPLRLLPAGMRPQLT 312
Query: 450 DCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMA 509
+ E T R+LA+ P HFALGRNR LQGLA A+++LWEKS +AKI +KR ++NT NE MA
Sbjct: 313 NDELTNMRKLAKSLPCHFALGRNRNLQGLASAILRLWEKSLVAKIGVKRGIVNTNNELMA 372
Query: 510 EELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASAL 569
+ELK LTGGTLL RNK YIV YRG DF+P V + ER +LT QD EE+ R AL
Sbjct: 373 QELKALTGGTLLLRNKYYIVIYRGKDFVPTSVAAVIAERQELTKQVQDVEEKVR--CKAL 430
Query: 570 IELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLA 629
+ + AG+LAE A + WGR S E+ E+MM++ +++A L++ +E KLA
Sbjct: 431 DSTPSGEDESTAQAGSLAEFYVAQACWGRDISTEERERMMQEVAKAKNAKLVKKIECKLA 490
Query: 630 LAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYD 689
+A+ K A+K LAK++ SL P D ETIT+EER + R +GL MK YL LG RG++D
Sbjct: 491 VAQAKRLRAEKLLAKIEASLLPVGPDYDKETITDEERVMFRSVGLRMKAYLPLGIRGVFD 550
Query: 690 GTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
G IENMHLHWK+RELVK+I K K+ A V+ A LE ESGG+LV++DK PKG ++I YRG
Sbjct: 551 GVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIDKVPKGFSLIYYRG 610
Query: 750 KNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
KNY RP+ LRP+NLLT+ +AL RSV +QR E L H+ +L E+IE +K +L
Sbjct: 611 KNYRRPMTLRPRNLLTKAKALQRSVVMQRHEALSQHVTELGEKIEEMKKKL 661
>gi|356522763|ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 734
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/580 (47%), Positives = 371/580 (63%), Gaps = 38/580 (6%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
+RR LA+ + + L+RLR +R+ ER V AG+TQ +++ IH++W+ +E+V+L
Sbjct: 171 KRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTQEVMEKIHKRWRKEELVRL 230
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQ------------- 343
KF E + M++ HEI+ERRTGGLV WRSGS ++++RG+ Y+ P Q
Sbjct: 231 KFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSQKEVNEKKGDGFFV 290
Query: 344 ---SFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELN 400
S + + T + +EV+ EHP EN+S+ E E N
Sbjct: 291 PDVSKREDSSTATSTSEKSEVVVREREHP----------------ENMSEAE----AEYN 330
Query: 401 YLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLA 460
LLD LGPRF W G LPVDADLLP VP YK P RLLP G++ L + E T R+LA
Sbjct: 331 ALLDGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLA 390
Query: 461 RKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTL 520
+ P HFALGRNR QGLA A++KLWEKS +AKIA+KR + NT NE MAEELK LTGGTL
Sbjct: 391 KSLPCHFALGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEELKMLTGGTL 450
Query: 521 LCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGS 580
L RNK +IV YRG DF+P V + ER +LT QD E++ R A I L +G +
Sbjct: 451 LLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPL-GQG-EAT 508
Query: 581 LVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADK 640
AGTLAE A +RWGR+ S E+ EKM+ ++ ++ A L+R +E K+ +A+ K A+K
Sbjct: 509 AQAGTLAEFYEAQARWGREISPEEREKMVEEAAKTKTAKLVRQIEHKIFIAQTKKLRAEK 568
Query: 641 ALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWK 700
LAK++ S+ PA D ETIT+EER + RK+GL MKPYL LG RG++DG +ENMHLHWK
Sbjct: 569 LLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWK 628
Query: 701 YRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRP 760
+RELVK++ K K+ A V+ A LE ESGG+LV+++K K A+I YRGKNY RP+ LRP
Sbjct: 629 HRELVKLMTKQKTVAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRP 688
Query: 761 QNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
+NLLT+ +AL R V +QR E L HI +L++ IE +K EL
Sbjct: 689 RNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKEL 728
>gi|356529577|ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 791
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/579 (46%), Positives = 370/579 (63%), Gaps = 37/579 (6%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
+RR LA+ + + L+RLR +R+ ER V AG+T+ +++ IH++W+ +E+V+L
Sbjct: 172 KRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTEEVMEKIHKRWRKEELVRL 231
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLP--------------CV 342
KF E + M++ HEI+ERRTGGLV WRSGS ++++RG+ Y+ P V
Sbjct: 232 KFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSRKELNEKKGDGFFV 291
Query: 343 QSFTK-HNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNY 401
+K + T + +EV+ EHP EN+S+ E E N
Sbjct: 292 PDVSKREDSTATSTSEKSEVVVREREHP----------------ENMSEAE----AEYNA 331
Query: 402 LLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLAR 461
LLD LGPRF W G LPVDADLLP VP YK P RLLP G++ L + E T R+LA+
Sbjct: 332 LLDGLGPRFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAK 391
Query: 462 KTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLL 521
P HFA+GRNR QGLA A++KLWEKS ++KIA+KR + NT NE MAEELK LTGGTLL
Sbjct: 392 SLPCHFAVGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELMAEELKMLTGGTLL 451
Query: 522 CRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSL 581
RNK +IV YRG DF+P V + ER +LT QD E++ R A+ + + +
Sbjct: 452 LRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVR--CRAVDAIPSGQGEATA 509
Query: 582 VAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKA 641
AGTLAE A +RWGR+ S ++ EKMM ++ ++ A L+R +E K+ +A+ K A+K
Sbjct: 510 QAGTLAEFYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFIAQTKKLRAEKL 569
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
LAK++ S+ PA D ETIT+EER + RK+GL MKPYL LG RG++DG +ENMHLHWK+
Sbjct: 570 LAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKH 629
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
RELVK++ K K+ A V+ A LE ESGG+LV+++K K A+I YRGKNY RP+ LRP+
Sbjct: 630 RELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRPR 689
Query: 762 NLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
NLLT+ +AL R V +QR E L HI +L++ IE +K EL
Sbjct: 690 NLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKEL 728
>gi|30678323|ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana]
gi|22531018|gb|AAM97013.1| unknown protein [Arabidopsis thaliana]
gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana]
gi|332640136|gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana]
Length = 1011
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 281/615 (45%), Positives = 368/615 (59%), Gaps = 57/615 (9%)
Query: 217 IKGYHEVDDPSVLPWKRNTDRRRRSNTE---LAEKMIPEHELQRLRNISLRMLERTKVGS 273
I YHE+ WK+ T+ R+ + LAE +P EL+RLR + +R+ ++ K+G
Sbjct: 134 ISRYHELKRV----WKKETEMERKKEEKVPSLAELTLPPAELRRLRTVGIRLTKKLKIGK 189
Query: 274 AGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFR 333
AGIT+ +V+ IHE+W+ EVVK+ E+ + MKRTH++LE +TGGLVIWRSGS ++L+R
Sbjct: 190 AGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIWRSGSKILLYR 249
Query: 334 GMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLEN--LSKE 391
G+ Y+ P S H + ++ V +S ES P N + L++
Sbjct: 250 GVNYQYPYFVSDRDLAH-EAASGASSMDQGVVDSREKQSIAESSAPSITNKMVKPMLTQG 308
Query: 392 -------------ELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLR 438
E+ + E + LL+ LGPRF DW +PLPVD DLLP VVPDY+ P R
Sbjct: 309 VGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFR 368
Query: 439 LLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKR 498
LLPYG+ P L D E T RRL R P HFALGRNR LQGLA A+VKLWEK +AKIA+KR
Sbjct: 369 LLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKR 428
Query: 499 DVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDI---- 554
V NT +E MAEELK LTGGTL+ R+KD+IV YRG DFLP V+ A++ER + T I
Sbjct: 429 GVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIMENS 488
Query: 555 -------RQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEK 607
++EEE IEL+AK + +T SR P
Sbjct: 489 SVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHI------QTHQMKSRQRNSPE------ 536
Query: 608 MMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERF 667
++L KL++A K A+K LA ++ P D E ITN+E++
Sbjct: 537 -----------AILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEKY 585
Query: 668 LLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAE 727
+LRK+GL MKP+LLLGRRG++DGTIENMHLHWKYRELVKII S ++A LEAE
Sbjct: 586 MLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAE 645
Query: 728 SGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHIL 787
SGG+LV+++ KG AIIVYRGKNY RP LRPQ LL++R+AL RSVE QRR+ LK H+L
Sbjct: 646 SGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVL 705
Query: 788 DLQERIELVKSELEE 802
L IE + +L E
Sbjct: 706 KLSNNIEELNRQLVE 720
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 661 ITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFA-QV 717
++N ER +LRK L MK P +GR + G + +H++ L + VKG++ V
Sbjct: 875 LSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSV 934
Query: 718 KQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
+++ L+ E+G +LVS + + +I+YRG
Sbjct: 935 QEVIAKLKEETGALLVSQEPS----KVILYRG 962
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 461 RKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTL 520
+K PP FA+GR+ + GLA+ + ++K+ +A + +K T + + +LK+ TG L
Sbjct: 891 KKRPP-FAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALL 949
Query: 521 LCRNKDYIVFYRG-------NDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIE 571
+ + ++ YRG F P + VK L R ++ HV+ ALIE
Sbjct: 950 VSQEPSKVILYRGWGAEEEMKSFYP---NNNVKSSINLPSTRSFVDD-PPHVSPALIE 1003
>gi|255552728|ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
gi|223543418|gb|EEF44949.1| conserved hypothetical protein [Ricinus communis]
Length = 1009
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/595 (45%), Positives = 370/595 (62%), Gaps = 41/595 (6%)
Query: 232 KRNTDRRRRSNT-ELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKL 290
K D++R + LAE + E EL+RLR I + + KVG AGIT+ +V+ IHE+W+
Sbjct: 139 KEREDKKREAKVPTLAELSLSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRR 198
Query: 291 DEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLP---------- 340
EVVK+ E+ + MKRTH++LER+TGGLV+WR+GS +VL+RG+ Y P
Sbjct: 199 SEVVKIVCEDLCRMNMKRTHDLLERKTGGLVVWRAGSKIVLYRGVNYIYPYFLSDNTTEN 258
Query: 341 -----CVQSFTKHNHTQQTQDVTNEV--MRNVGEHPPRSAMESYVPDSANNLENLSKEEL 393
VQ KHN + + + ++ V ++ G P A+ + L N + +L
Sbjct: 259 DTSIDAVQDTHKHNDSDKIKSCSSSVDGVKFSGPSPTNKAVRPALIQGVG-LPNRVRFQL 317
Query: 394 MDLCEL----NYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLR 449
+L + LL+ LGPRF DW G EPLPVDADLLP +VP Y+ P RLLPYGIKP L
Sbjct: 318 PGEAQLAEEVDSLLEGLGPRFSDWWGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILT 377
Query: 450 DCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMA 509
+ E T +RL R P HF LGRNR+LQGLA +++KLWEK IAKIA+KR V NT +E MA
Sbjct: 378 NDEMTTLKRLGRPLPCHFVLGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSEMMA 437
Query: 510 EELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASAL 569
EELK+LTGGTLL R++++IV YRG DFLP V+ A+KER + +ER + SA
Sbjct: 438 EELKRLTGGTLLSRDREFIVLYRGKDFLPSAVSSAIKERR--NHVFNVAKERTDNSTSAE 495
Query: 570 IELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASL----LRYLE 625
+A+ + TS G Q + + D + R S ++
Sbjct: 496 TAKEAE------------DVEDGTSNSGSQDEFHGNNEQSYDLSKQRKLSFTKEAIKRTS 543
Query: 626 QKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRR 685
+L++A K A K LA+++ S + D E IT+EER++LRK+GL MKP+LL+GRR
Sbjct: 544 IRLSMALEKKAKAVKLLAEIENSEMSQQPEIDKEGITDEERYMLRKVGLKMKPFLLIGRR 603
Query: 686 GIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAII 745
G++DGTIENMHLHWKYRELVKII K +S V ++A SLEAESGG+LV++++ KG AI+
Sbjct: 604 GVFDGTIENMHLHWKYRELVKIICKERSLNAVHEVAQSLEAESGGILVAVERVSKGYAIV 663
Query: 746 VYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
VYRGKNY RP LRP LL++R+A+ RS+E QRRE LK H+L L I +K +L
Sbjct: 664 VYRGKNYQRPALLRPPTLLSKREAMKRSLEAQRRESLKLHVLRLTRNINDLKLKL 718
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 653 ELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVK 710
E+ S ++N +R +LRK L MK P L +GR I G + + H+K L + VK
Sbjct: 853 EMQSSTICLSNRDRLMLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFKKYPLAIVNVK 912
Query: 711 GKS-FAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
G++ V+++ LE +GGVLVS + + +I+YRG
Sbjct: 913 GRAKGTSVQEVVFQLEQATGGVLVSQEPS----KVILYRG 948
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 459 LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGG 518
L K P A+GR+ + G+AK + ++K +A + +K T + + +L++ TGG
Sbjct: 874 LKMKNRPVLAVGRSNIVTGVAKTIKAHFKKYPLAIVNVKGRAKGTSVQEVVFQLEQATGG 933
Query: 519 TLLCRNKDYIVFYRG 533
L+ + ++ YRG
Sbjct: 934 VLVSQEPSKVILYRG 948
>gi|357500379|ref|XP_003620478.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355495493|gb|AES76696.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 820
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/598 (45%), Positives = 373/598 (62%), Gaps = 27/598 (4%)
Query: 224 DDPSVLPWKRNTDRRRRS------------------NTELAEKMIPEHELQRLRNISLRM 265
D+ V+PWKR +R RS LAE + + L+RLR + +
Sbjct: 169 DEKMVVPWKREEEREMRSIDSGGGIKEEGFKKRTLKAPSLAELTLEDELLRRLRREGMHL 228
Query: 266 LERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRS 325
ER V AG+TQ +++ IHE W+ E+V+LKF E + M+ H+I+ERRTGGLV WR+
Sbjct: 229 RERVSVPKAGLTQEVMEKIHESWRKKELVRLKFHEELAKNMRIAHQIVERRTGGLVTWRA 288
Query: 326 GSSVVLFRGMAYKLPCVQSF-TKHNHTQQTQDVTNEVMRNVGEHPPRSAMES--YVPDSA 382
GS ++++RG Y+ P K DV++ + + S++E+ V +
Sbjct: 289 GSVMIVYRGKNYQGPASPELDVKEGDGFFVPDVSSGSLSKTKDSNATSSLENSEQVGRNV 348
Query: 383 NNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPY 442
E +++EE E N LLD+LGPRF W G PVDADLLP VP YK P RLLP
Sbjct: 349 ELPEKMTEEE----AEYNALLDDLGPRFVGWWGTGIPPVDADLLPREVPGYKTPYRLLPT 404
Query: 443 GIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMN 502
G++ L E T+ R++A+ P HFALGRNR QGLA A++KLWE+S IAKIA+K + N
Sbjct: 405 GMRSRLTGAEMTDLRKIAKSLPCHFALGRNRNHQGLACAILKLWERSLIAKIAVKPGIQN 464
Query: 503 TRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERA 562
T N+ MA+EL LTGGTLL RN+ YIV YRG DF+P V + ER +LT QD EE+
Sbjct: 465 TNNKLMADELSTLTGGTLLLRNRFYIVIYRGKDFVPTGVAAVLAERQELTKQVQDVEEKV 524
Query: 563 RHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLR 622
R A++ + + AG+LAE A +RWGR S E+ E+M++++T +++ L++
Sbjct: 525 R--CKAVVATPSVQGEATAPAGSLAEFYEAQARWGRDVSSEEHERMIKEATKAKNVKLVK 582
Query: 623 YLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLL 682
+E K++LA KL A++ LAK++ S+ P D ETIT+EER + R++GL MK YL L
Sbjct: 583 QIEHKISLAANKLHRAERLLAKIESSMVPVGPDYDQETITDEERVVFRQIGLRMKAYLQL 642
Query: 683 GRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGI 742
G RG++DG IENMHLHWK+RELVK++ K K+ A V+ A LE ESGG+LV+++K K
Sbjct: 643 GIRGVFDGVIENMHLHWKHRELVKLVTKQKNRAFVEDTARLLEYESGGILVAIEKVSKEF 702
Query: 743 AIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
AII YRGKNY RPL LRP+NLLT+ +AL RSV + R E L +HI +L+ IE +K EL
Sbjct: 703 AIIYYRGKNYKRPLTLRPRNLLTKAKALKRSVAMLRHEALSNHITELETTIEQMKQEL 760
>gi|6692258|gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
Length = 1020
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 281/624 (45%), Positives = 368/624 (58%), Gaps = 66/624 (10%)
Query: 217 IKGYHEVDDPSVLPWKRNTDRRRRSNTE---LAEKMIPEHELQRLRNISLRMLERTKVGS 273
I YHE+ WK+ T+ R+ + LAE +P EL+RLR + +R+ ++ K+G
Sbjct: 134 ISRYHELKRV----WKKETEMERKKEEKVPSLAELTLPPAELRRLRTVGIRLTKKLKIGK 189
Query: 274 AGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFR 333
AGIT+ +V+ IHE+W+ EVVK+ E+ + MKRTH++LE +TGGLVIWRSGS ++L+R
Sbjct: 190 AGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIWRSGSKILLYR 249
Query: 334 GMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLEN--LSKE 391
G+ Y+ P S H + ++ V +S ES P N + L++
Sbjct: 250 GVNYQYPYFVSDRDLAH-EAASGASSMDQGVVDSREKQSIAESSAPSITNKMVKPMLTQG 308
Query: 392 -------------ELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLR 438
E+ + E + LL+ LGPRF DW +PLPVD DLLP VVPDY+ P R
Sbjct: 309 VGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFR 368
Query: 439 LLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKR 498
LLPYG+ P L D E T RRL R P HFALGRNR LQGLA A+VKLWEK +AKIA+KR
Sbjct: 369 LLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKR 428
Query: 499 DVMNTRNERMAEELKK---------LTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERS 549
V NT +E MAEELK LTGGTL+ R+KD+IV YRG DFLP V+ A++ER
Sbjct: 429 GVQNTNSELMAEELKVVGLLLVIKWLTGGTLISRDKDFIVLYRGKDFLPSAVSSAIEERR 488
Query: 550 KLTDI-----------RQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGR 598
+ T I ++EEE IEL+AK + +T SR
Sbjct: 489 RQTMIMENSSVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHI------QTHQMKSRQRN 542
Query: 599 QPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDL 658
P ++L KL++A K A+K LA ++ P D
Sbjct: 543 SPE-----------------AILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDK 585
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E ITN+E+++LRK+GL MKP+LLLGRRG++DGTIENMHLHWKYRELVKII S
Sbjct: 586 EGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAH 645
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQR 778
++A LEAESGG+LV+++ KG AIIVYRGKNY RP LRPQ LL++R+AL RSVE QR
Sbjct: 646 KVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQR 705
Query: 779 REGLKHHILDLQERIELVKSELEE 802
R+ LK H+L L IE + +L E
Sbjct: 706 RKSLKLHVLKLSNNIEELNRQLVE 729
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 661 ITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFA-QV 717
++N ER +LRK L MK P +GR + G + +H++ L + VKG++ V
Sbjct: 884 LSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSV 943
Query: 718 KQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
+++ L+ E+G +LVS + + +I+YRG
Sbjct: 944 QEVIAKLKEETGALLVSQEPS----KVILYRG 971
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 461 RKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTL 520
+K PP FA+GR+ + GLA+ + ++K+ +A + +K T + + +LK+ TG L
Sbjct: 900 KKRPP-FAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALL 958
Query: 521 LCRNKDYIVFYRG-------NDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIE 571
+ + ++ YRG F P + VK L R ++ HV+ ALIE
Sbjct: 959 VSQEPSKVILYRGWGAEEEMKSFYP---NNNVKSSINLPSTRSFVDD-PPHVSPALIE 1012
>gi|168024308|ref|XP_001764678.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683972|gb|EDQ70377.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 625
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/585 (44%), Positives = 368/585 (62%), Gaps = 19/585 (3%)
Query: 230 PWKRNT------------DRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGIT 277
PW +NT ++R + +AE IP+ EL+RLR + L++ R K+G G+T
Sbjct: 1 PWDKNTHEEVNEEEGQVAKKQRVRSPSMAELTIPDFELKRLRTLGLQLQGRLKIGRLGVT 60
Query: 278 QALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
+V++IHE+W+ E+ K+K + P S+ MK+ HE LER TGGLVIWRSGS+ V++RG Y
Sbjct: 61 PGIVEAIHERWRTCEIAKVKCDAPLSMNMKKAHEDLERLTGGLVIWRSGSAAVVYRGKDY 120
Query: 338 KLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLC 397
P V+ + ++ + ++ N+ E R + E K++ DL
Sbjct: 121 VHPSVREREEREERERRKLLS----LNLDEDEEREEQIDSTSTVSVEREAYLKKQENDLR 176
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
+ +LD LGPR+ DW GR P+PVD DLL ++K P RLLPYG+KP L + E TE R
Sbjct: 177 MVEEILDGLGPRYADWTGRRPVPVDGDLLLSSDFEFKRPFRLLPYGVKPKLNNFELTELR 236
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
LAR PPH LG+NR L G+A A+VKLWE+S I KI +KR V NT NERMAEELK+LTG
Sbjct: 237 HLARPIPPHIVLGKNRGLDGVAAAIVKLWERSEIVKIGVKRGVQNTSNERMAEELKRLTG 296
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASA--LIELKAK 575
GTLL R+K++IVF+RG DFLPP V A++ER ++ Q+EEER R + + ++
Sbjct: 297 GTLLSRDKEFIVFHRGKDFLPPAVQAALEERDQMAKALQEEEERFRMGGRSRPVQVVEET 356
Query: 576 GFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKL 635
+ G GTL E L ++W ++ K + + A + KL LA +K+
Sbjct: 357 RYQGVYKVGTLEEALETRAKWEAWLDSDEARKERIAARKRKRAQATDRIRSKLNLALKKM 416
Query: 636 KMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENM 695
+ A L KV+ PA + D E +++ ER++ RK+GL MK +LLLGRRG++ GT+ENM
Sbjct: 417 ERAQLELNKVEAKTTPANVTLDKEHLSDGERYMYRKLGLKMKAFLLLGRRGVFSGTVENM 476
Query: 696 HLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
HLHWKYRELVKI+VK S + ++IA LE ESGG+LV + T KG AI++YRGKNY RP
Sbjct: 477 HLHWKYRELVKILVK-TSLPEAERIAKILENESGGILVDIITTSKGQAIVMYRGKNYQRP 535
Query: 756 LKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
+LRP++LLT+RQAL RS+E+QR E L+ HI L++ IE +++ L
Sbjct: 536 SELRPRHLLTKRQALKRSLEMQRMESLEKHIRVLKKEIETMQAGL 580
>gi|222632479|gb|EEE64611.1| hypothetical protein OsJ_19463 [Oryza sativa Japonica Group]
Length = 601
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/559 (45%), Positives = 351/559 (62%), Gaps = 40/559 (7%)
Query: 263 LRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVI 322
+ + +R V AG+TQA+ + IH+ W+ E+V+LKF E + MK HE++ERRTGGL+I
Sbjct: 1 MTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLII 60
Query: 323 WRSGSSVVLFRGMAYKLPCVQSFTKHN---------------------HTQQTQDVTNEV 361
WRSGS +V++RG YK P N H Q +DV +
Sbjct: 61 WRSGSVMVVYRGSNYKRPLKSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQ- 119
Query: 362 MRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPV 421
E R M+ N E++++EEL E N +LDELGPRF DW G LPV
Sbjct: 120 ----REIAARLNMQ--------NTEDMTEEEL----EFNQMLDELGPRFVDWWGTGILPV 163
Query: 422 DADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKA 481
DADLLP +P YK P RLLP G++ L + E T R+LAR P HFALGRNR QGLA A
Sbjct: 164 DADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAA 223
Query: 482 MVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVV 541
+VKLWEKS + KIA+KR + NT N+ M+EE+K LTGGTLL RNK YIV YRG DFLP V
Sbjct: 224 IVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSV 283
Query: 542 TDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPS 601
A+ ER +LT Q+ EE+ R + ++ G +AGTLAE A +RWGR+ +
Sbjct: 284 AAALAEREELTKDIQNVEEQKRCIP--VVHSMDDSLDGHALAGTLAEFQEAQARWGREVT 341
Query: 602 YEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETI 661
++ E+M S+ S L + LE KL++A+ K+ A++ L+K++ S+ A D E I
Sbjct: 342 AKEQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMI 401
Query: 662 TNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIA 721
T+EER + R++GL +K YL +G RG++DG IENMHLHWK+RE+VK+I K K+ V++ A
Sbjct: 402 TDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETA 461
Query: 722 ISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREG 781
LE ESGG+LV++++ KG A+I YRGKNY RP+ +RP+NLLT+ +AL R+V +QR E
Sbjct: 462 RLLEYESGGILVAIERVTKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEA 521
Query: 782 LKHHILDLQERIELVKSEL 800
L HI +L+ I +K +L
Sbjct: 522 LSQHIAELENNIRQMKLDL 540
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 248 KMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMK 307
+MI + E R I LR+ VG G+ +++++H WK EVVKL ++ ++
Sbjct: 399 EMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVE 458
Query: 308 RTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPC 341
T +LE +GG+++ G +++ +RG Y+ P
Sbjct: 459 ETARLLEYESGGILVAIERVTKGYALIFYRGKNYRRPI 496
>gi|357496109|ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355493358|gb|AES74561.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 1096
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/580 (44%), Positives = 360/580 (62%), Gaps = 53/580 (9%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
LAE + + E+ RLR + +M ++ KVG AG+T+ +V+ IHE+W+ EVV++ E+ +
Sbjct: 146 LAELSLTDGEILRLRELGYQMKQKIKVGKAGVTEGIVNGIHERWRRSEVVRVVCEDLCRI 205
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQS----FTKHNHTQQTQDVTNE 360
MKRTH+ILER+TGGLV+WRSGS ++L+RG+ YK P S + + Q D +E
Sbjct: 206 NMKRTHDILERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDEVLREEESDALQPMDSDDE 265
Query: 361 VMRNVGEHPPRSAMESYVPDSAN------------------NLENLSKEELMDLCELNYL 402
+ H + ++ S+N + + EL++ E++ L
Sbjct: 266 SIDERKTHSSEMSSATHAGQSSNIKTVKPALVQGVGTPNRVRFQLPGEAELLE--EVDSL 323
Query: 403 LDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARK 462
L+ LGPRF DW G +P+PVDADLLP V+P ++PP RLLPYG++ L D E T +RL R
Sbjct: 324 LEGLGPRFTDWWGYDPVPVDADLLPAVIPGFRPPFRLLPYGVQSKLTDDEMTTLKRLGRT 383
Query: 463 TPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLC 522
P HFALGRN +LQG+A A++K WE+ I IA+KR V NT N +MAEE+K LTGGTLL
Sbjct: 384 LPCHFALGRNWKLQGVAAAIIKFWERCEIVNIAVKRGVQNTSNRKMAEEIKYLTGGTLLS 443
Query: 523 RNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLV 582
RNK+ IV YRG DFLP V+ A+K+R K +++ E R+ AS+ E K F+
Sbjct: 444 RNKEVIVIYRGKDFLPAAVSSAIKKRWKAVKNKENAENRSAITASSHSERKHMTFI---- 499
Query: 583 AGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKAL 642
E +EK + L + + ++ KLA A K + A+K L
Sbjct: 500 -----------------KDKETIEKPL----LMKAKAAIQRTSFKLAQALEKKEKAEKLL 538
Query: 643 AKVQ--ESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWK 700
++ ESL E+ D E+IT EER++LR++GL MKP+LLLGRRG++DGT+ENMHLHWK
Sbjct: 539 ESLEKDESLQEEEI--DKESITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWK 596
Query: 701 YRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRP 760
YRELVKII +S Q A +LEAESGG+LV++++ KG AIIVYRGKNY RP LRP
Sbjct: 597 YRELVKIICNQESVEYAHQTARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPDSLRP 656
Query: 761 QNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
+ LL ++QAL RS+E QRRE LK H+L L + I +K ++
Sbjct: 657 RTLLNKKQALKRSIEAQRREALKLHVLKLDKNINELKHQM 696
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 651 PAELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKII 708
P E S +++N ER LLRK L MK P + +G+ I G E + + V +
Sbjct: 907 PIEFSSRSSSLSNRERLLLRKQALRMKKIPIVPIGKSNIVAGLEEAIKNLLRRHPFVIVN 966
Query: 709 VKGKS-FAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
VKG++ V ++ LE +G VLVS + + II+YRG
Sbjct: 967 VKGRAKGTSVHELVSILEEATGAVLVSQEPS----KIILYRG 1004
>gi|449440945|ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449477054|ref|XP_004154915.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 560
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/499 (50%), Positives = 331/499 (66%), Gaps = 13/499 (2%)
Query: 306 MKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC-VQSFTKHNHTQQTQDV---TNEV 361
MK HEI+ERRTGGLV+WRSGS +V++RG Y+ P ++ T+ DV T
Sbjct: 1 MKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGPSKIKPLTRDGDGVFIPDVSSATTST 60
Query: 362 MRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPV 421
NV P M P +N E LS+EE E N LLD LGPRF +W G LPV
Sbjct: 61 SDNVAASVPEKTMMPIGPPMSN--EGLSEEE----AEYNQLLDGLGPRFVEWWGTGVLPV 114
Query: 422 DADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKA 481
DAD LPP +P YK P RLLP G++ L + E T+ R+LA+ P HFALGRNR QGLA A
Sbjct: 115 DADQLPPSIPGYKTPFRLLPTGMRSRLTNAEMTQMRKLAKSLPCHFALGRNRNHQGLAVA 174
Query: 482 MVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVV 541
++KLWEKS + KIA+KR + NT N+ MAEE+ LTGG LL RNK +IV YRG DFLPP V
Sbjct: 175 ILKLWEKSLVVKIAVKRGIQNTNNKLMAEEIGNLTGGVLLLRNKYFIVIYRGKDFLPPSV 234
Query: 542 TDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPS 601
A+ ER +LT QD EE+ R+ ++E + G AGTLAE A SRWGR+ +
Sbjct: 235 AVALTERQELTKQIQDVEEKVRN---KVVEATSLSINGQAPAGTLAEFYEAQSRWGREIT 291
Query: 602 YEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETI 661
E+ EKM+ +S+ ++ A L+R +E KL +A+ K A+K L+K++ S+ + D ETI
Sbjct: 292 AEEREKMVEESSRAKTARLVRRIEHKLGVAQAKKLRAEKLLSKIEASMILSSPDDDQETI 351
Query: 662 TNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIA 721
T+EER + R++GL M YL +G RG++DG +ENMHLHWK+RELVK+I K K+ A V++ A
Sbjct: 352 TDEERVMFRRVGLRMTAYLPMGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEETA 411
Query: 722 ISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREG 781
LE ESGG+LVS+D+ PKG A++ YRGKNY RP+ LRP+NLLT+ +AL RSV +QR E
Sbjct: 412 RLLEYESGGILVSIDRVPKGYALVYYRGKNYRRPIALRPRNLLTKAKALKRSVAMQRHEA 471
Query: 782 LKHHILDLQERIELVKSEL 800
L HI +L++ IE +K E+
Sbjct: 472 LSQHISELEQNIEQMKKEI 490
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
++ I + E R + LRM +G G+ +V+++H WK E+VKL ++ +
Sbjct: 348 QETITDEERVMFRRVGLRMTAYLPMGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFV 407
Query: 307 KRTHEILERRTGGLVI----WRSGSSVVLFRGMAYKLPC 341
+ T +LE +GG+++ G ++V +RG Y+ P
Sbjct: 408 EETARLLEYESGGILVSIDRVPKGYALVYYRGKNYRRPI 446
>gi|224059986|ref|XP_002300024.1| predicted protein [Populus trichocarpa]
gi|222847282|gb|EEE84829.1| predicted protein [Populus trichocarpa]
Length = 1012
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 281/616 (45%), Positives = 373/616 (60%), Gaps = 52/616 (8%)
Query: 215 KQIKGYHEVDDPSVLPWKRNTDRRRRSNT------ELAEKMIPEHELQRLRNISLRMLER 268
K I YHE+ +R R R + LAE +P EL+RLR I + +
Sbjct: 129 KAISRYHEL--------RREVKREREAKKGEAKVPSLAELSLPNEELRRLRTIGIAEKRK 180
Query: 269 TKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSS 328
KVG AGIT+ +V+ IHE+W+ EVVK+ E+ + MKRTH++LER+TGGLV+WR GS
Sbjct: 181 LKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRTHDLLERKTGGLVVWRVGSK 240
Query: 329 VVLFRGMAYKLPCVQSFTKH-NHTQ----QTQDVTNE-------VMRNV-GEHPP--RSA 373
+VL+RG YK P + T N T Q DV ++ V+ V G PP RS+
Sbjct: 241 IVLYRGADYKYPYFLAETSSVNETSPDAVQNIDVDDKEVDEEGSVLSAVDGAAPPEPRSS 300
Query: 374 MESYVPD------SANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLP 427
E P S N + E E + LLD LGPRF DW G +PLPVDADLLP
Sbjct: 301 DEIVRPSLVQGVGSPNRVRFQLPGEAQLTEEADQLLDGLGPRFNDWWGYDPLPVDADLLP 360
Query: 428 PVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWE 487
VV Y+ P RLLPYG+ P L + E T +RL R P HFALGRN + QGLA ++VKLWE
Sbjct: 361 AVVSGYRRPFRLLPYGVSPTLTNDEMTTLKRLGRPLPCHFALGRNTKHQGLAASIVKLWE 420
Query: 488 KSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKE 547
K IAKIA+KR V NT +E MA+ELK LTGGTLL R++++IV YRG DFLP V+ A+++
Sbjct: 421 KCEIAKIAVKRGVQNTNSELMAQELKWLTGGTLLSRDREFIVLYRGKDFLPSAVSSAIED 480
Query: 548 RSKLTDIRQDEEERARHVASA---LIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYED 604
R K R D ++R ++ ELK + + T A SR + +
Sbjct: 481 RRK----RGDMDKRWTDCITSNETSEELKDRSW----------RTTNAKSRDEIDDTNDR 526
Query: 605 VEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNE 664
+ + L + ++ KL++A K A+K L+++++S + D E IT E
Sbjct: 527 KHDLSENKNLRSTDAAIKRTSIKLSMALEKKAKAEKLLSELEKSEMSQQPEKDKEGITEE 586
Query: 665 ERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISL 724
ER++LRK+GL MKP+LL+G RG++DGTIENMHLHWKYRELVKII K KSF V+ +A +L
Sbjct: 587 ERYMLRKIGLKMKPFLLMGERGVFDGTIENMHLHWKYRELVKIICKEKSFQAVQAVARTL 646
Query: 725 EAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKH 784
EAESGG+LV+++ KG AII+YRGKNY RP LRP LL++RQA+ RS+E QRRE LK
Sbjct: 647 EAESGGILVAVEGVSKGYAIILYRGKNYTRPACLRPPTLLSKRQAMKRSLEAQRRESLKL 706
Query: 785 HILDLQERIELVKSEL 800
H+L L I+ +K +L
Sbjct: 707 HVLRLTSNIDHLKLQL 722
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 655 PSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGK 712
PS + ++N +R LLRK L MK P L +GR I G + + H++ + VKG+
Sbjct: 861 PSSVVCLSNRDRLLLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFQRHPFAIVHVKGR 920
Query: 713 S-FAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
+ V+++ LE +G VLVS + + +I+YRG
Sbjct: 921 AKGTSVQEVVSKLEEATGAVLVSQEPS----KVILYRG 954
>gi|302805129|ref|XP_002984316.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
gi|300148165|gb|EFJ14826.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
Length = 692
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/557 (45%), Positives = 357/557 (64%), Gaps = 20/557 (3%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
LAE IPE EL+RL+ I++R++ KVG G+T+A+V IH +W+ EVVK++ + P ++
Sbjct: 75 LAELTIPELELRRLQRIAIRVVNPIKVGYLGVTKAVVQDIHRRWQKCEVVKIQCDGPAAI 134
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVT-NEVMR 363
MK+TH+ LE +TGGLV+WR+G +L+RG Y S + Q + + E ++
Sbjct: 135 NMKQTHDELETKTGGLVVWRTGGMAILYRGKGYFARVDNSMVANLKKYQRRKINLMEAIK 194
Query: 364 NVGEHPPRSAMESYVPDSANNLENLSKE-ELMDLCELNYLLDELGPRFKDWPGREPLPVD 422
E R +S ++ + E + E E +D E++ LL+ELGPR+ DW GR+P+PVD
Sbjct: 195 IRDEDEDRDYSQSEHGEARRDSEKGNIEDEYLD--EIDALLEELGPRYDDWIGRKPVPVD 252
Query: 423 ADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAM 482
DLLP VP YKPPLR+LPY K L + E T RRL + PPHF LGRNR LQGLA A+
Sbjct: 253 GDLLPASVPGYKPPLRMLPYRAKKNLSNMELTVLRRLVKPLPPHFVLGRNRGLQGLASAI 312
Query: 483 VKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVT 542
+KLW+KS + KI +KR V NTRN+ MAEEL++LTGG LL R+K +I YRG DFLP V
Sbjct: 313 LKLWQKSELVKIGLKRGVQNTRNQLMAEELERLTGGVLLSRDKFFITLYRGKDFLPTSVA 372
Query: 543 DAVKERSKLTDIRQDEEERARHVASALIELKAKGFVG------SLVAGTLAETLAATSRW 596
++ER E R + +++ +G + V+G+L+E++ +W
Sbjct: 373 AVLRER----------ESNMRELLLKEDQVRIPAQIGDGQNRTTPVSGSLSESMEMRRQW 422
Query: 597 GRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPS 656
Q S +D E + ++ + LE KLA A K + AD + K++ SL +E P
Sbjct: 423 EAQRSEKDDEMDRNAAVVALKVREQKRLEAKLAAAISKKRRADLQIVKLERSLLLSEHPR 482
Query: 657 DLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ 716
D ETIT EER++ +K+GL M +LL+GRRG++DG IENMHLHWK+RELVK+I+K K A
Sbjct: 483 DRETITEEERYMFKKLGLRMDAFLLIGRRGVFDGVIENMHLHWKHRELVKLILKEKDKAI 542
Query: 717 VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVEL 776
++A LE ESGG+LV + T KG AIIVYRGKNY RP +LRP++LLT+R+ALARS E+
Sbjct: 543 ALEVAKMLEIESGGILVGVVTTSKGQAIIVYRGKNYQRPAELRPRSLLTKRKALARSKEI 602
Query: 777 QRREGLKHHILDLQERI 793
QR++ L+ HI L+E I
Sbjct: 603 QRKKALQLHIEKLEELI 619
>gi|356573408|ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1027
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/598 (42%), Positives = 362/598 (60%), Gaps = 45/598 (7%)
Query: 225 DPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSI 284
DP+ W + +RR LAE + + E++RL L M ++ +VG AG+T+ +V+ I
Sbjct: 109 DPT---WAKR-ERREDKVPTLAELSLSDAEIRRLTTAGLAMRQKLRVGKAGLTEGIVNGI 164
Query: 285 HEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQS 344
HE+W+ EVV++ E+ MKRTH++LER+TGGLV+WRSGS ++L+RG YK P S
Sbjct: 165 HERWRSFEVVRIVCEDLSRFNMKRTHDLLERKTGGLVVWRSGSKIILYRGTDYKYPYFLS 224
Query: 345 --FTKHNHTQQTQDVTNEVMRNVGE---HPPRSAMESYVPDSAN------------NLEN 387
++ ++T +E +N + H +Y S+N N
Sbjct: 225 DKVSRDDNTGDAMQHMDEDAKNFDKRESHSSEKNSVTYAGKSSNVKTAKPALIQGVGSPN 284
Query: 388 LSKEELMDLCEL----NYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYG 443
+ +L EL + LL +GPRF DW G +PLPVDADLLP V+P Y+ P RLLPYG
Sbjct: 285 KVRFQLPGEAELAKDADSLLTGIGPRFIDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYG 344
Query: 444 IKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 503
+KP L D E T RRL + P HFALGRN++L GLA A++KLWE+ I KIAIKR V+NT
Sbjct: 345 VKPKLTDDEMTTMRRLGKHLPCHFALGRNKKLHGLAAAIIKLWERCEIVKIAIKRGVLNT 404
Query: 504 RNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERAR 563
E MAEE+K LTGGTL+ R+K++IVFYRG DFLP V+ A+++R +
Sbjct: 405 NGELMAEEIKYLTGGTLIARDKEFIVFYRGKDFLPTAVSSAIEQRRSI------------ 452
Query: 564 HVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY 623
+ +LK + SL + T + + +K + L+ + ++
Sbjct: 453 ----GMYKLKTR---NSLSVTDDPDLKDGTIECDSEVKGMNFKKDTKQGMLTEAEAAIKS 505
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
KL++A + A+K L++++ + P E + E IT EE+++LR++GL M P+LLLG
Sbjct: 506 TSIKLSMALEEKAKAEKLLSELENAESPQEEEINKEGITEEEKYMLRRIGLKMSPFLLLG 565
Query: 684 RRGIYDGTIENMHLHWKYRELVKIIV-KGKSFAQVKQIAISLEAESGGVLVSLDKTPKGI 742
RRG++DGT+ENMHLHWKYRELVKII K S V+QIA +LEAESGG+L+++++ K
Sbjct: 566 RRGVFDGTVENMHLHWKYRELVKIICNKQMSLEDVQQIAQTLEAESGGILIAVERVNKSY 625
Query: 743 AIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
AIIVYRGKNY RP LRP+ LL ++QAL RS+E QR E LK H+L L I +K ++
Sbjct: 626 AIIVYRGKNYSRPASLRPRTLLNKKQALKRSIEAQRCESLKLHVLKLDRNINELKHQM 683
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 638 ADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENM 695
+D L+ + + ELPS ++N ER LLRK L MK P L +G+ I G + +
Sbjct: 876 SDPDLSALVRDMSSNELPSRSVYLSNRERLLLRKQALKMKKRPVLSVGKSNIVTGLAKAI 935
Query: 696 HLHWKYRELVKIIVKGKS-FAQVKQIAISLEAESGGVLVS--LDKTPKGIAIIVYRG 749
H++ L + VKG++ ++++ LE E+G VLVS L+K +I+YRG
Sbjct: 936 KAHFQKHPLAIVNVKGRAKGTSIQEVVSKLEQETGAVLVSQELNK------VILYRG 986
>gi|168038664|ref|XP_001771820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676951|gb|EDQ63428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1106
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 265/593 (44%), Positives = 364/593 (61%), Gaps = 34/593 (5%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
++R + +AE +PE EL+RLR + L++ R K+G G+T +V++IH++W+ E+ K+
Sbjct: 312 KKRVRSPSVAELTLPEPELRRLRTLGLQLQGRLKIGRLGVTPGIVEAIHDRWRTSELAKV 371
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHN--HTQQT 354
K + P S+ MK+ HE LER TGGLVIWR+GS+ V++RG Y P V +
Sbjct: 372 KCDAPLSMNMKKAHEDLERLTGGLVIWRAGSAAVVYRGKDYVHPFVLEREEKELLSLDLD 431
Query: 355 QDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLS--KEELM------DLCELNYLLDEL 406
+D E++ G MES + + + + S KE LM DL + LLD L
Sbjct: 432 EDEEQELLMEAGSE---VEMESSIEECFDVTGDQSGEKEFLMKQGQNADLMMMEELLDGL 488
Query: 407 GPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPH 466
GPR+ DW G++P+PVD DLL +K P RLLP+G+KP L D E T+ RRLAR PPH
Sbjct: 489 GPRYADWKGKDPVPVDGDLLLDSEFKFKRPFRLLPHGVKPKLNDFEMTQLRRLARPVPPH 548
Query: 467 FALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELK------------- 513
F LGRNR L GLA A++KLWEKS I KI +K+ V NT NE+MAEELK
Sbjct: 549 FVLGRNRGLDGLAAAIMKLWEKSEIVKIGVKKGVQNTSNEKMAEELKARITSKFPSSRIT 608
Query: 514 -KLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIEL 572
+LTGGTLL R+K+YIV RG DFLP V A++ER ++ Q+EEER R
Sbjct: 609 VRLTGGTLLARDKEYIVLSRGKDFLPSAVRVALEERDRMAKAVQEEEERIRLSGRK---- 664
Query: 573 KAKGFVGSLVAGTLAETLAATSRW-GRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALA 631
+ V + GTL E + + W G Q S E ++ + R ++ R + QK+ LA
Sbjct: 665 RVVQIVDTSKVGTLEEAMETRAAWEGWQKSDEARKERIAARKAKRGQAMDR-IRQKMKLA 723
Query: 632 KRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGT 691
+K + A LAK+ +P + P D E ++ ER++ R+ GL K YLLLGRRG++ GT
Sbjct: 724 LQKKERAMAELAKIDAKTNPTDAPLDKEFLSEAERYMYRQQGLKHKGYLLLGRRGVFGGT 783
Query: 692 IENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN 751
+ENMHLHWK+RELVKI+VK A+ +Q A LE ESGG+LV + T KG AIIVYRGKN
Sbjct: 784 VENMHLHWKHRELVKILVKA-PIAEAQQTAKMLERESGGILVDIVNTSKGQAIIVYRGKN 842
Query: 752 YVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
Y RP +LRP++LLT+RQAL RS+E+QR + L+ HI L IE +++ L ++E
Sbjct: 843 YQRPSELRPRHLLTKRQALKRSLEVQRMQSLEKHIQILMTEIETMQAGLNKME 895
>gi|449459492|ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 1032
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 274/616 (44%), Positives = 382/616 (62%), Gaps = 52/616 (8%)
Query: 217 IKGYHEVDDPSVLPWKRNTDRRRRSNTE----LAEKMIPEHELQRLRNISLRMLERTKVG 272
IK +HE+ V WK+ R + E LAE + E EL RLR I +R+ ++ VG
Sbjct: 128 IKRFHELRG-EVQKWKKRDGVREKKREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVG 186
Query: 273 SAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLF 332
AGIT+ +V++IHE W+ EVVK+ E+ L MKRTH++LER+TGG+V+WRSGS ++L+
Sbjct: 187 KAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILY 246
Query: 333 RGMAY-----------------KLPCVQSFTKHN-HTQQTQDVTNEVMRNVGEHPPRSAM 374
RG Y LP S N T+ T N+ R+ G P S++
Sbjct: 247 RGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSETESTLSCIND-ERSAG---PTSSV 302
Query: 375 ESYVPDSANNL--ENLSKEELMDLCEL----NYLLDELGPRFKDWPGREPLPVDADLLPP 428
+ P + N + +L EL LL+ LGPRF DW G +PLPVDADLLP
Sbjct: 303 KMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPA 362
Query: 429 VVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEK 488
+VP Y+ P RLLPYG+KP L + E T RRLAR P HFALGRNR+LQGLA ++++LWEK
Sbjct: 363 IVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEK 422
Query: 489 SAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKER 548
IAKIA+KR V NT N+ MAEEL+ LTGGTLL R++++IV YRG DFLP V+ A++++
Sbjct: 423 CEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQK 482
Query: 549 S--KLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVE 606
+L +++Q + A +E+ G T + S G + +
Sbjct: 483 RHMRLHEMKQTDNSPATTGQGLKLEINENG-----------PTNESQSITGWKKIVSERR 531
Query: 607 KMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEER 666
K+M T R S+ KL++A K A++ LAK++E + D E IT EER
Sbjct: 532 KLMSSETSMRKTSI------KLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEER 585
Query: 667 FLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEA 726
++L+K+GL MKP+LLLGRRG++DGT+ENMHLHWKYRELVKII +SF V +A +LEA
Sbjct: 586 YMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEA 645
Query: 727 ESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHI 786
ESGG+LV++++ + AII++RGKNY RP +LRP++LL +++AL RS+E QRR+ LK H+
Sbjct: 646 ESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHV 705
Query: 787 LDLQERIELVKSELEE 802
L L + +E +K +L+E
Sbjct: 706 LKLTQNVEELKLKLDE 721
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 651 PAELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKII 708
P P+++ ++N+ER LLR+ L MK P L +G+ + G + + H+K L +
Sbjct: 897 PGYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVN 956
Query: 709 VKGKS-FAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
VKG++ V++I LE +G VLVS + + +I+YRG
Sbjct: 957 VKGRAKGTSVQEIVFKLEQATGAVLVSQEPS----KVILYRG 994
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 446 PGLRDCETTEFRRLARKTP--PHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 503
P L + E RR A K P ++G++ + G+AKA+ + ++K ++A + +K T
Sbjct: 905 PQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGT 964
Query: 504 RNERMAEELKKLTGGTLLCRNKDYIVFYRG 533
+ + +L++ TG L+ + ++ YRG
Sbjct: 965 SVQEIVFKLEQATGAVLVSQEPSKVILYRG 994
>gi|356573410|ref|XP_003554854.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1028
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 261/601 (43%), Positives = 363/601 (60%), Gaps = 63/601 (10%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLER-TKVGSAGITQALVDSIHEKWKLDEVVK 295
RR+ LAE +P+ E++RL + ++ ++ AGIT+ +VD IHE+WK EVV+
Sbjct: 135 RRKELVPTLAELSLPDSEIRRLTTLGFSTTKKKVRLAKAGITEQIVDVIHERWKRSEVVR 194
Query: 296 LKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQ 355
+ EE M+RTH++LER+TGGLV+WRSG+ ++L+RG YK P F T+Q
Sbjct: 195 VFCEELSRDDMRRTHDLLERKTGGLVVWRSGTKIILYRGADYKYPY---FLSDKVTRQ-D 250
Query: 356 DVTNEVMRNVGEHPPRSAMESYVPDSANNL----------ENLSKE-------------- 391
+ +N+ +++V +A + Y S ++L EN + E
Sbjct: 251 NTSNDALQHV------NADDKYCDKSESHLSEKNSVACAVENSNAETAKPALILGVGTPN 304
Query: 392 ----ELMDLCEL----NYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYG 443
+L D EL + LL LGPRF DW G +PLPVDADLLP V+ Y+ P RLLPYG
Sbjct: 305 KVRFQLPDEAELAEDTDCLLTGLGPRFTDWWGGDPLPVDADLLPAVIHGYRKPFRLLPYG 364
Query: 444 IKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 503
+ P L D E T +RL + P HFALGRNR+LQGLA A++KLWE+ I KIA+KR V NT
Sbjct: 365 VNPKLTDDEMTTLKRLGKPLPCHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNT 424
Query: 504 RNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERAR 563
++ MA+ELK LTGG LL R++++ VFYRG D+LP V+ A+K++ +
Sbjct: 425 SSKIMAKELKHLTGGILLSRDREFFVFYRGKDYLPAAVSSAIKKQRNI------------ 472
Query: 564 HVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY 623
+ +LK F SL A T + + +K + L++ ++
Sbjct: 473 ----GMYKLK---FGNSLSATVTPNPKDGTIECNSEVKGMNFQKDTKQRMLTKAEEAIKR 525
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
KL++A K A+K L K+ + P E D E I+ EE+++LR++GL MKP+LLLG
Sbjct: 526 TSIKLSMALEKKAKAEKLLEKLINAESPQEQEIDKEGISKEEKYMLRRIGLMMKPFLLLG 585
Query: 684 RRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIA 743
RRG++DGT+ENMHLHWKYRELVKII G S +V QIA++LEAESGG+LV++++ KG A
Sbjct: 586 RRGVFDGTVENMHLHWKYRELVKIICNG-SLEEVHQIALTLEAESGGILVAVERVRKGFA 644
Query: 744 IIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEI 803
IIVYRGKNY P+ LRPQ LL +RQAL RS+E QRRE LK IL L + I +K ++ E
Sbjct: 645 IIVYRGKNYSVPVCLRPQTLLNKRQALKRSIEAQRRESLKLRILTLDKEINELKLQIVED 704
Query: 804 E 804
E
Sbjct: 705 E 705
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 625 EQKLALAKRKLKMADKALAKV-QESLDPA---ELPSDLETITNEERFLLRKMGLSMK-PY 679
+ +L ++ RK + +L+K +E L P LPS ++ +ER LLRK L +K P
Sbjct: 826 DTELHISNRKGMESSNSLSKNDREPLAPVIYMSLPSRSVHLSTKERLLLRKQALKIKQPV 885
Query: 680 LLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKS-FAQVKQIAISLEAESGGVLVSLDKT 738
L +G+ I G ++ + H++ L + VKG++ V+++ LE E+G +LVS + +
Sbjct: 886 LAIGKSNIVSGVVQTIKAHFEKHPLAVVNVKGRAKGTSVQELVFKLEQETGALLVSREPS 945
Query: 739 PKGIAIIVYRG 749
II+YRG
Sbjct: 946 ----NIILYRG 952
>gi|449515235|ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 1053
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 270/613 (44%), Positives = 377/613 (61%), Gaps = 45/613 (7%)
Query: 217 IKGYHEVDDPSVLPWKRNTDRRRRSNTE----LAEKMIPEHELQRLRNISLRMLERTKVG 272
IK +HE+ V WK+ R + E LAE + E EL RLR I +R+ ++ VG
Sbjct: 148 IKRFHELRG-EVQKWKKRDGVREKKREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVG 206
Query: 273 SAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLF 332
AGIT+ +V++IHE W+ EVVK+ E+ L MKRTH++LER+TGG+V+WRSGS ++L+
Sbjct: 207 KAGITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILY 266
Query: 333 RGMAYKLPCV----------QSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSA 382
RG Y P Q +H+ + E + + SYV +
Sbjct: 267 RGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSETESTLSCINDERSAGPTSYVKMPS 326
Query: 383 NNL------ENLSKEELMDLCEL----NYLLDELGPRFKDWPGREPLPVDADLLPPVVPD 432
L N + +L EL LL+ LGPRF DW G +PLPVDADLLP +VP
Sbjct: 327 PTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPG 386
Query: 433 YKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIA 492
Y+ P RLLPYG+KP L + E T RRLAR P HFALGRNR+LQGLA ++++LWEK IA
Sbjct: 387 YRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIA 446
Query: 493 KIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERS--K 550
KIA+KR V NT N+ MAEEL+ LTGGTLL R++++IV YRG DFLP V+ A++++ +
Sbjct: 447 KIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMR 506
Query: 551 LTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMR 610
L +++Q + A +E+ G T + S G + + K+M
Sbjct: 507 LHEMKQTDNSPATTGQGLKLEINENG-----------PTNESQSITGWKKIVSERRKLMS 555
Query: 611 DSTLSRHASLLRYLEQKLAL-AKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLL 669
T R S+ KL++ RK A++ LAK++E + D E IT EER++L
Sbjct: 556 SETSMRKTSI------KLSIVCIRKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYML 609
Query: 670 RKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESG 729
+K+GL MKP+LLLGRRG++DGT+ENMHLHWKYRELVKII +SF V +A +LEAESG
Sbjct: 610 KKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESG 669
Query: 730 GVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDL 789
G+LV++++ + AII++RGKNY RP +LRP++LL +++AL RS+E QRR+ LK H+L L
Sbjct: 670 GILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKL 729
Query: 790 QERIELVKSELEE 802
+ +E +K +L+E
Sbjct: 730 TQNVEELKLKLDE 742
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 651 PAELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKII 708
P P+++ ++N+ER LLR+ L MK P L +G+ + G + + H+K L +
Sbjct: 918 PGYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVN 977
Query: 709 VKGKS-FAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
VKG++ V++I LE +G VLVS + + +I+YRG
Sbjct: 978 VKGRAKGTSVQEIVFKLEQATGAVLVSQEPS----KVILYRG 1015
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 446 PGLRDCETTEFRRLARKTP--PHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 503
P L + E RR A K P ++G++ + G+AKA+ + ++K ++A + +K T
Sbjct: 926 PQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGT 985
Query: 504 RNERMAEELKKLTGGTLLCRNKDYIVFYRG 533
+ + +L++ TG L+ + ++ YRG
Sbjct: 986 SVQEIVFKLEQATGAVLVSQEPSKVILYRG 1015
>gi|302768979|ref|XP_002967909.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
gi|300164647|gb|EFJ31256.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
Length = 557
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/552 (42%), Positives = 340/552 (61%), Gaps = 22/552 (3%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
+RR LAE ++P+ EL+RLR + + ER KV GIT+ +V +IH+KW+ E+VKL
Sbjct: 20 QRRVRPPSLAELVLPDAELRRLRTMIIHTKERIKVKKLGITRNVVQAIHQKWRTSEIVKL 79
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQD 356
K ++ ++ M++ HE LE+RTGGLVIWR+G+++V++RG Y P + + + ++
Sbjct: 80 KCDQEVAMNMRKVHEELEKRTGGLVIWRAGTALVIYRGKDYAGPPKERWIPTESVSKPKE 139
Query: 357 VTNEVMRNVGEHPPRS-------AMESYVPDSANNLENLSKEELMDLCELNYLLDELGPR 409
E P +S +++ + N++ + E M +++ LL ELGPR
Sbjct: 140 SV--------EKPEKSHVSGELLGIDTQFKEFVNHIPFIEAEYEM---QMDRLLAELGPR 188
Query: 410 FKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFAL 469
+ DW G P+PVD D LP + ++K P RLLPYG++P L D E T RLAR+ PP F +
Sbjct: 189 YADWKGDRPVPVDGDKLPAIDHNFKSPYRLLPYGMEPKLSDKEFTNLVRLARQMPPQFVI 248
Query: 470 GRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIV 529
RN+ LQGLAKAMVKLWEK+ I K+AIK+ V +T N +MA+ELK+LTG LL R K +++
Sbjct: 249 SRNKGLQGLAKAMVKLWEKTEITKVAIKQSVQSTDNAKMADELKRLTGCVLLGREKTHMI 308
Query: 530 FYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAET 589
FYRG DFLP + A +ER ++ +D E++AR + + + K V E
Sbjct: 309 FYRGKDFLPAPIAAAFEEREAMSFANKDVEDKARMLPTGKVTEK---IVHVEQRPQETEA 365
Query: 590 LAATSRWGRQPSYEDVEKM-MRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQES 648
W + E + M+ + +R + R L+ + A RK + A++AL+KV++
Sbjct: 366 DIKLKEWIKNQEEEKRRAIVMKAARAARARRIERRLDIVSSFAIRKKEKAEEALSKVEKL 425
Query: 649 LDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKII 708
+ P E D ETIT EER+ L+++GL MK +LLLGRRG+Y G IENMHLHWKYRELVK++
Sbjct: 426 MKPREPSEDRETITEEERYTLQRVGLKMKAFLLLGRRGVYSGIIENMHLHWKYRELVKVV 485
Query: 709 VKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQ 768
KGK ++ A +E ESGG+L+ + KG + YRGKNY RP +LRP NLLT+R+
Sbjct: 486 YKGKDRMDIEDTAKMIECESGGILIGIYPVSKGQVFLYYRGKNYRRPEELRPHNLLTKRK 545
Query: 769 ALARSVELQRRE 780
ALAR E QRRE
Sbjct: 546 ALARYTETQRRE 557
>gi|302761182|ref|XP_002964013.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
gi|300167742|gb|EFJ34346.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
Length = 555
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/552 (42%), Positives = 342/552 (61%), Gaps = 25/552 (4%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
+RR LAE ++P+ EL+RLR + + ER KV GIT+ +V +IH+KW+ E+VKL
Sbjct: 21 QRRVRPPSLAELVLPDAELRRLRTMIIHTKERIKVKKLGITRNVVQAIHQKWRTSEIVKL 80
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQD 356
K ++ ++ M++ HE LE+RTGGLVIWR+G+++V++RG Y P + + + ++
Sbjct: 81 KCDQEVAMNMRKVHEELEKRTGGLVIWRAGAALVIYRGKDYAGPPKERWIPTESVSKPKE 140
Query: 357 VTNEVMRNVGEHPPRS-------AMESYVPDSANNLENLSKEELMDLCELNYLLDELGPR 409
E P +S +++ + N++ + E M +++ LL ELGPR
Sbjct: 141 SV--------EKPEKSHVSGELLGIDTQFKEFVNHIPFIEAEYEM---QMDRLLAELGPR 189
Query: 410 FKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFAL 469
+ DW G P+PVD D LP + ++K P RLLPYG++P L D E T RLAR+ PP F +
Sbjct: 190 YADWKGDRPVPVDGDKLPAIDHNFKSPYRLLPYGMEPKLSDREFTNLVRLARQMPPQFVI 249
Query: 470 GRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIV 529
RN+ LQGLAKAMVKLWEK+ I K+AIK+ V +T N +MA+ELK+LTG LL R K +++
Sbjct: 250 SRNKGLQGLAKAMVKLWEKTEITKVAIKQSVQSTDNAKMADELKRLTGCVLLGREKTHMI 309
Query: 530 FYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAET 589
FYRG DFLP + A +ER ++ +D E++AR + + + K V E
Sbjct: 310 FYRGKDFLPAPIAAAFEEREAMSFANKDVEDKARMLPTGKVTEK---IVHVEQRPQETEA 366
Query: 590 LAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESL 649
W + ++ EK + A+ R +E++L +A RK + A++AL+KV++ +
Sbjct: 367 DIKLKEWIKN---QEEEKRRAIVMKAARAARARRIERRLDIAVRKKEKAEEALSKVEKLM 423
Query: 650 DPAELPSDLETITNEERFLLRKMGLSMKPYLLL-GRRGIYDGTIENMHLHWKYRELVKII 708
P E D ETIT EER+ L+++GL MK +LLL GRRG+Y G IENMHLHWKYRELVK++
Sbjct: 424 KPREPSEDRETITEEERYTLQRVGLKMKAFLLLAGRRGVYSGIIENMHLHWKYRELVKVV 483
Query: 709 VKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQ 768
KGK ++ A +E ESGG+L+ + KG + YRGKNY RP +LRP NLLT+R+
Sbjct: 484 YKGKDRMDIEDTAKMIECESGGILIGIYPVSKGQVFLYYRGKNYRRPEELRPHNLLTKRK 543
Query: 769 ALARSVELQRRE 780
ALAR E QRRE
Sbjct: 544 ALARYTETQRRE 555
>gi|449441730|ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 760
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 252/612 (41%), Positives = 342/612 (55%), Gaps = 32/612 (5%)
Query: 217 IKGYHEVDDPSVLPWKRNTD-----RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKV 271
++G+ E +PW+++ D R ++ AE + L+RL+ + +M + KV
Sbjct: 151 LEGFEESGTRRRMPWEKDDDGIVLRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKV 210
Query: 272 GSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVL 331
G+TQ +V+ I W+ +E+ LKF+ P S M R EI+E +TGG+V+W +++V+
Sbjct: 211 NKVGVTQDVVNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVV 270
Query: 332 FRGMAYKLPCVQSFTKHNHT--QQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLS 389
+RG Y L S K H Q V + ++ H S + + D+ E S
Sbjct: 271 YRGCNYPLNLKHSTKKQVHISPQNPVKVETDTHFSLSGHY-ESGLNRSINDNDGEWEEAS 329
Query: 390 K------EELMDLC------ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPL 437
E L L E + LLD+LGPRF DW +PLPVDAD+LP VVP Y PP
Sbjct: 330 SFFLIRHENLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPF 389
Query: 438 RLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIK 497
R P K L D R+LA P HF LGRNR+LQGLA +++KLWEKS IAKIA+K
Sbjct: 390 RRCPPYTKQNLTDAGLQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALK 449
Query: 498 RDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQD 557
V NT NE+MA ELK LTGGTLL RNK I+ YRGNDFLP V D++ +R Q
Sbjct: 450 WGVPNTDNEQMALELKNLTGGTLLLRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQL 509
Query: 558 EEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRH 617
EE +R AS + AGTL++ T YED+ +S L
Sbjct: 510 HEENSRLKASEFFCFDTENMEERGKAGTLSDFKDITV------GYEDLSTGSTESRLQAE 563
Query: 618 ASL------LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRK 671
A LR E++L + K++ + K L K+ S E +D E ITNEER RK
Sbjct: 564 AEKGKIIRGLRMQERRLKILNFKVEKSTKELTKLNASWRRVEPDADQELITNEERICFRK 623
Query: 672 MGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGV 731
MGL M L LGRRG++DG IE +H HWK+RE+VK+I ++F QV A LEAESGG+
Sbjct: 624 MGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTAKLLEAESGGI 683
Query: 732 LVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQE 791
LVS+DK +G AII++RGKNY RPL +NLLT+R+AL+RS+E+QR LK Q+
Sbjct: 684 LVSVDKLKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQRQQ 743
Query: 792 RIELVKSELEEI 803
+I ++ ELE +
Sbjct: 744 KIYELQHELENV 755
>gi|449490080|ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 760
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 251/612 (41%), Positives = 342/612 (55%), Gaps = 32/612 (5%)
Query: 217 IKGYHEVDDPSVLPWKRNTD-----RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKV 271
++G+ E +PW+++ D R ++ AE + L+RL+ + +M + KV
Sbjct: 151 LEGFEESGTRRRMPWEKDDDGIVLRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKV 210
Query: 272 GSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVL 331
G+TQ +V+ I W+ +E+ LKF+ P S M R EI+E +TGG+V+W +++V+
Sbjct: 211 NKVGVTQDVVNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVI 270
Query: 332 FRGMAYKLPCVQSFTKHNHT--QQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLS 389
+RG Y L S K H Q V + ++ H S + + D+ E S
Sbjct: 271 YRGCNYPLNLKHSTKKQVHISPQNPVKVETDTHFSLSGHY-ESGLNRSINDNDGEWEEAS 329
Query: 390 K------EELMDLC------ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPL 437
E L L E + LLD+LGPRF DW +PLPVDAD+L VVP Y PP
Sbjct: 330 SFFLIRHENLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLQEVVPGYMPPF 389
Query: 438 RLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIK 497
R P K L D R+LA P HF LGRNR+LQGLA +++KLWEKS IAKIA+K
Sbjct: 390 RRCPPYTKQNLTDAGLQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALK 449
Query: 498 RDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQD 557
V NT NE+MA ELK LTGGTLL RNK I+ YRGNDFLP V D++ +R Q
Sbjct: 450 WGVPNTDNEQMALELKNLTGGTLLLRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQL 509
Query: 558 EEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRH 617
EE +R AS + AGTL++ T YED+ +S L
Sbjct: 510 HEENSRLKASEFFCFDTENMEERGKAGTLSDFKDITV------GYEDLSTGSTESRLQAE 563
Query: 618 ASL------LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRK 671
A LR E++L + K++ + K L K+ S E +D E ITNEER RK
Sbjct: 564 AEKXKIIRGLRMQERRLKILNFKVEKSTKELTKLNASWRRVEPDADQELITNEERICFRK 623
Query: 672 MGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGV 731
MGL M L LGRRG++DG IE +H HWK+RE+VK+I ++F QV A LEAESGG+
Sbjct: 624 MGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTAKLLEAESGGI 683
Query: 732 LVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQE 791
LVS+DK +G AII++RGKNY RPL +NLLT+R+AL+RS+E+QR LK Q+
Sbjct: 684 LVSVDKLKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQRQQ 743
Query: 792 RIELVKSELEEI 803
+I ++ ELE++
Sbjct: 744 KIYELQHELEKV 755
>gi|225452088|ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/580 (42%), Positives = 338/580 (58%), Gaps = 34/580 (5%)
Query: 255 LQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILE 314
L+RLR +++M + KV AG+T+++VD IH WK DE+ +KF+ P M R EILE
Sbjct: 207 LERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILE 266
Query: 315 RRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKH-------------------NHTQQTQ 355
+T GLVIW ++V++RG Y QS +KH N +
Sbjct: 267 IKTRGLVIWSKKDTLVVYRGSNY-----QSTSKHFQKMRPGLVAGADASNSKLNQSNFED 321
Query: 356 DVTNEVMR----NVGEHPPRSAMESYVPDSANNLENLSKEELMDLC----ELNYLLDELG 407
D+T ++ GE R E + +E + + ++ E + LLD LG
Sbjct: 322 DLTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLG 381
Query: 408 PRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHF 467
PRF DW +PLPVDADLLP V+P ++PP RL P + L D E T R+LA P HF
Sbjct: 382 PRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHF 441
Query: 468 ALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDY 527
LGRNR+LQGLA A++KLWEKS I KIAIK + NT+NE+MA ELK LTGG LL RNK +
Sbjct: 442 VLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFF 501
Query: 528 IVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLA 587
I+ YRG DFLP V + + ER Q EE AR A + K + GTL+
Sbjct: 502 IILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLS 561
Query: 588 ETLAATSRW-GRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQ 646
E + + G + ++E + ++ R L+ E+ L + KRK++ + K LAK+
Sbjct: 562 EFQNIETEFRGLKDGNTEIEVEL-EAEKERLEKELKKQERNLFILKRKIERSAKVLAKLN 620
Query: 647 ESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVK 706
+ PA+ +D E IT EER RK+G M LLLGRRG++DG IE +H HWK+RE+VK
Sbjct: 621 SAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVK 680
Query: 707 IIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTR 766
+I +SF+QV A LE+ESGGVLVS+DK +G AII+YRGKNY RP+KL P+NLLT+
Sbjct: 681 VITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTK 740
Query: 767 RQALARSVELQRREGLKHHILDLQERIELVKSELEEIEGG 806
R+AL RS+E+QR LK Q+ I +K +L +++ G
Sbjct: 741 REALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLADLQKG 780
>gi|110742047|dbj|BAE98956.1| hypothetical protein [Arabidopsis thaliana]
Length = 717
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/454 (49%), Positives = 306/454 (67%), Gaps = 14/454 (3%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
LAE +PE EL+RLRN++ R + ++ G+TQ VD+I EKWK E+V+LK E +L
Sbjct: 216 LAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASAL 275
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
M++ HEILE++TGGLVIWRSG+S+ L+RG++Y+LP K N ++ + V+ N
Sbjct: 276 NMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPS----GKWNKQRREETPPEAVIEN 331
Query: 365 VGEHPP---RSAMESYVPDSANNLENLSKEE-----LMDLCELNYLLDELGPRFKDWPGR 416
E +S + ++P ++ K++ + EL+ LLD+LGPRF DWPG
Sbjct: 332 HDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELLDDLGPRFMDWPGD 391
Query: 417 EPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQ 476
PLPVDADLLP +PDY+PP R+LPYG++ L E T RRLAR PPHFALGR+R+LQ
Sbjct: 392 NPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQ 451
Query: 477 GLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDF 536
GLA AMV+LWEKS +AKIAIKR V +T +ERMAE+LKKLTGG +L RNKD++VFYRG +F
Sbjct: 452 GLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNF 511
Query: 537 LPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLV-AGTLAETLAATSR 595
L V DA+ E+ + QDEEE+AR S+ + + + LV AGTL ETL AT +
Sbjct: 512 LSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGK 571
Query: 596 WGRQPSYED-VEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAEL 654
WG+ +D +++ ++ + RH +L+R LE+KLA A+RKL A++ LAKV+ L PAE
Sbjct: 572 WGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQ 631
Query: 655 PSDLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
D E+IT+EERF+ RK+GL MK +LLLG I+
Sbjct: 632 REDPESITDEERFMFRKLGLKMKAFLLLGFAPIF 665
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 669 LRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVK-GKSFAQVKQIAISLEAE 727
LR++ S+ P+ LGR G M W+ L KI +K G +++A L+
Sbjct: 431 LRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKL 490
Query: 728 SGGVLVSLDKTPKGIAIIVYRGKNYV 753
+GG+++S +K ++ YRGKN++
Sbjct: 491 TGGIMLSRNKD----FLVFYRGKNFL 512
>gi|357521157|ref|XP_003630867.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355524889|gb|AET05343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 676
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/589 (39%), Positives = 330/589 (56%), Gaps = 94/589 (15%)
Query: 243 TELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPH 302
E+ + + EL RLR + + + ++ + +G+T++++ IH +W +E+VKLKF +
Sbjct: 99 NEVTVPCLEKEELSRLRTMGIHLKQKISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQL 158
Query: 303 SLQMKRTHEILE------------------------------------------RRTGGL 320
M H I++ RRTGGL
Sbjct: 159 VQNMNLAHNIVQVSIPSSRIIPYRMVIVLQLVILCFFFHHRITNLVPSGLYLLVRRTGGL 218
Query: 321 VIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPD 380
VIWRSGS + ++RG +Y+ P + H + D +E + + P
Sbjct: 219 VIWRSGSVMWVYRGKSYQGPT----NGNQHESKGGDEKSESVVLNQQQP----------- 263
Query: 381 SANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLL 440
EN++ EE E N +LD+ GPRF DW G LPVDADLLPP +P Y+ PLR+L
Sbjct: 264 -----ENMTPEE----AEFNRMLDDFGPRFVDWWGTGILPVDADLLPPTIPGYRTPLRIL 314
Query: 441 PYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDV 500
P + P L + E T+ +LA+ P HFALGRNR LQGLA A++KLWEKS +AKIA+K V
Sbjct: 315 PARMHPRLTNDEHTKMLKLAKALPCHFALGRNRNLQGLACAILKLWEKSLVAKIAVKLGV 374
Query: 501 MNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKER-----SKLTDIR 555
NT NE MA ELKKLTGGTLL RNK YI+ YRG DF+P V + ER + D+
Sbjct: 375 QNTNNELMALELKKLTGGTLLLRNKYYILIYRGKDFIPTSVAAILSERQENVQCRAVDVS 434
Query: 556 QDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLS 615
++E A+ AG++AE A + GR+ S E+ EKMM+++ +
Sbjct: 435 GEDETSAQ-------------------AGSMAEFNEAQALCGREISTEECEKMMKEAAEA 475
Query: 616 RHASLLRYLEQKLAL----AKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRK 671
+ L++ +E+K A+ K A+K LAK+ S+ P + ETIT+EER + R
Sbjct: 476 TNVRLMKKIERKPAVIHEHTDTKKSRAEKLLAKIDSSMVPVGPDNRRETITDEERVMFRV 535
Query: 672 MGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGV 731
+GL +K YL L G++D IENMHLHW+ RELVK+I K KS A V++ A LE +SGG+
Sbjct: 536 VGLRLKVYLQLDTLGVFDSVIENMHLHWRQRELVKLITKQKSLAFVEETASLLEYKSGGI 595
Query: 732 LVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRRE 780
LV++D+ PKG ++I YRGK+Y RP+ LR +NLLT+ +AL S+ +QR E
Sbjct: 596 LVAIDRLPKGFSLIYYRGKDYKRPITLRHRNLLTKTKALQHSISMQRHE 644
>gi|356567264|ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 712
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 252/620 (40%), Positives = 349/620 (56%), Gaps = 51/620 (8%)
Query: 209 VGSLNQKQIKGY-------HEVDDPSVLPWKRN-----TDRRRRSNTELAEKMIPEHELQ 256
V SLN + GY EV +PW+++ +R AE + + L+
Sbjct: 118 VDSLNVENFGGYLEILKENEEVRSKGRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLR 177
Query: 257 RLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERR 316
RLRN + RM KV AG+TQ +VD I W+ +E+ +KF+ P M R EI+E +
Sbjct: 178 RLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETK 237
Query: 317 TGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMES 376
TGGLV+ +V++RG C NH ++E++ +H + ++ +
Sbjct: 238 TGGLVVLSKKDFLVVYRG------C-------NHH------SSEMLNWNADH--KDSIST 276
Query: 377 YVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPP 436
+ D L N S E E LLD LGPRF DW +PLPVDADLLP VP ++PP
Sbjct: 277 GIQDVNCQLVNGSLYER----ETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPP 332
Query: 437 LRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAI 496
RL P L D E T FR+LA+ P HF LGRN+ L+GLA A++KLWEKS IAKIAI
Sbjct: 333 FRLCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAI 392
Query: 497 KRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQ 556
K + NT NE MA ELK LTGG LL RNK YI+ YRGNDFLP V V++R RQ
Sbjct: 393 KYGIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQ 452
Query: 557 DEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSR 616
EE AR A + + + +GTL E Q ED + + DS +
Sbjct: 453 LHEEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKI------QTKLEDTKSVNVDSNIQL 506
Query: 617 HASLLRYLEQKLA-------LAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLL 669
A + R LE++L + +K+K +++ L+K+ + P+E +DLE +T+EER
Sbjct: 507 EAEICR-LEKELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECF 565
Query: 670 RKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESG 729
RK+GL M+ LLLGRRGI+DG +E +H HWK+RE+VK+I K F+QV A LE ESG
Sbjct: 566 RKIGLKMQSSLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESG 625
Query: 730 GVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDL 789
G+LVS+DK +G AII+YRGKNY RP +NLLT+R+AL RS+E+QR +K
Sbjct: 626 GILVSVDKLKEGHAIIIYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQR 685
Query: 790 QERIELVKSELEEIEGGKTM 809
++ I ++ +L +++ K +
Sbjct: 686 EQAISELEVKLADLQQKKEI 705
>gi|255551422|ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical protein [Ricinus communis]
Length = 742
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/548 (44%), Positives = 323/548 (58%), Gaps = 30/548 (5%)
Query: 264 RMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIW 323
+M + KV AG+TQ++VD I W+ +E+ +KF+ P M R EI+E +TGGLV+W
Sbjct: 212 KMRKWVKVMKAGVTQSVVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVW 271
Query: 324 RSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSAN 383
S+V++RG Y L TK +H T D E+ P S ++ D AN
Sbjct: 272 TRKDSLVIYRGCNYHL------TKSSHVS-TMDEKIGSKDGEEEYIPTSI---FIGDDAN 321
Query: 384 N-LENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPY 442
N S E E + LLD LGPRF DW R+PLPVDADLLP VV + PP R +
Sbjct: 322 TPTINGSLFER----ETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVAGFMPPSRF--H 375
Query: 443 GIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMN 502
+ L+D E T R+LA P HF LGRNR LQGLA A++KLWE+S IAKIA+K + N
Sbjct: 376 YARAKLKDDELTYLRKLAYALPTHFVLGRNRRLQGLAAAILKLWERSLIAKIAVKWGIPN 435
Query: 503 TRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERA 562
T NE+MA ELK LTGG LL RNK +I+ +RG DFLP V D V +R I Q EE A
Sbjct: 436 TDNEQMANELKHLTGGVLLLRNKFFIILFRGKDFLPCQVADLVVKRENELKICQLNEEGA 495
Query: 563 RHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASL-- 620
R A + V + GTL E R ++++ K RDS L A
Sbjct: 496 RLKAIETSFTDDELVVKATKIGTLNEFQDIQVR------FKELAKGYRDSKLQLEAEKEK 549
Query: 621 ----LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSM 676
LR E KL + K K++ + + L+K+ + PA+ +DLE +T EER LRK+GL M
Sbjct: 550 LERELRIQEHKLLILKSKIEKSARELSKLNSAWAPADQDADLEMMTEEERECLRKIGLKM 609
Query: 677 KPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLD 736
+ LLLGRRG++DG IE +H HWK+RE+VK+I + FAQV + A LEAE+GG+LVS+D
Sbjct: 610 RSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVIRTAKFLEAETGGILVSID 669
Query: 737 KTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELV 796
K +G AII+YRGKNY RP +L NLLT+R+AL RS+E+QR L+ Q I +
Sbjct: 670 KLKEGHAIIIYRGKNYRRPQRL-LNNLLTKRKALCRSLEMQRIGSLRFFAYQRQHSIREL 728
Query: 797 KSELEEIE 804
K +L +++
Sbjct: 729 KFQLAQLQ 736
>gi|357145812|ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 730
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/567 (39%), Positives = 329/567 (58%), Gaps = 13/567 (2%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKL-DEVVKLKFEEPHSL 304
AE+ + L+RLR + M + AG+T +V+ + +W E+ ++ EP
Sbjct: 159 AERELGPALLERLRRAARGMDRWARAKKAGVTDEVVEDVRSEWSSGQELAGVRIVEPLRR 218
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRG------MAYKLPCVQSFTKHNHTQQTQDVT 358
M R EILE +TGGLV+W G ++RG M Y V K Q+
Sbjct: 219 CMDRAREILEIKTGGLVVWTKGDIHFVYRGSDYVHNMKYSHNFVADIQKVRTPQEKYKSN 278
Query: 359 NEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCE--LNYLLDELGPRFKDWPGR 416
E++ G+H ++ DS+ +++ + L E +N LLD LGPRF DW
Sbjct: 279 VELL---GKHNGKAKGAFREKDSSIDIQTYEEPVKGTLYEREVNRLLDSLGPRFIDWWWN 335
Query: 417 EPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQ 476
PLPVDADLLP VV +K P R P G++P L D E T R+LAR P HFALGRN +LQ
Sbjct: 336 TPLPVDADLLPEVVLGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPAHFALGRNTKLQ 395
Query: 477 GLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDF 536
GLA A++KLWEKS +AKIA+K + NT NE+MA LK LTGGT++ RNKD+I+ YRG DF
Sbjct: 396 GLAAAILKLWEKSLVAKIAVKVGIENTNNEQMAWNLKHLTGGTIILRNKDFIILYRGKDF 455
Query: 537 LPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRW 596
LP V +V + D +Q +EE AR + +++ A AGT E
Sbjct: 456 LPAGVKQSVIQHEAQVDAQQVKEEEARLSGTESLQMFAGLPSVESSAGTFREYQDFQVNQ 515
Query: 597 GRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPS 656
+ + + + ++ R L+ E++L + +K++ +++ALAK+ S +P+E +
Sbjct: 516 AHETTINNKAMIELEAEKHRLEKELKDQERRLFILTKKIERSNQALAKLHSSWNPSEQSA 575
Query: 657 DLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ 716
D E +T EER + RK+GL M ++LLGRRG++DG IE +H HWK++E+VK+I K Q
Sbjct: 576 DKELLTEEERMIFRKIGLKMDEHVLLGRRGVFDGVIEEIHQHWKHKEIVKVITKQNQSYQ 635
Query: 717 VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVEL 776
+ ++ LE E+GGVL++ K P AII+YRGKNY RP K P NLLT+R+AL RSVE+
Sbjct: 636 ITYTSMLLEVETGGVLIATQKLPHSHAIILYRGKNYRRPEK-SPSNLLTKREALRRSVEV 694
Query: 777 QRREGLKHHILDLQERIELVKSELEEI 803
QRR +K+++ + Q+ IE ++ L +
Sbjct: 695 QRRGSMKYYVWERQKSIEELQWRLANV 721
>gi|414870652|tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 715
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/563 (40%), Positives = 322/563 (57%), Gaps = 27/563 (4%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKL-DEVVKLKFEEPHSL 304
AE + HEL RLR ++ + + AG+T +V + +W +E+ ++ EP
Sbjct: 166 AETELETHELHRLRRLARGIGRWARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRR 225
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
M R EILE +TGGLV+W G ++RG Y Q KH+HT + N
Sbjct: 226 SMDRAREILEIKTGGLVVWTKGDMHFVYRGSKY-----QQNAKHSHT---------FLTN 271
Query: 365 VGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDAD 424
V H + E+ E K L + E+N LLD LGPRF DW PLPVDAD
Sbjct: 272 V--HKDDAFQENDQSICGQKDEEPVKGTLYE-REVNRLLDTLGPRFVDWWWDTPLPVDAD 328
Query: 425 LLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVK 484
LLP VP +K P RL P G++P L D E T R+LAR P HFALGRN LQGLA A++K
Sbjct: 329 LLPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILK 388
Query: 485 LWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDA 544
LWEKS IAKIA+K + NT NE+MA LK LTGGT++ RNKD+I+ YRG DFLP V
Sbjct: 389 LWEKSLIAKIAVKIGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQT 448
Query: 545 VKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVA----GTLAETLAATSRWGRQP 600
V +R Q +EE AR A +++ VG L GT E +++ +
Sbjct: 449 VIQREAQVHDEQVKEEEARLKAVDSLQM-----VGELSEESSLGTFREYQGFHAKFVHEN 503
Query: 601 SYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLET 660
+ + ++ R L+ E KL++ +K++ +++ALAK+ S P+E +D E
Sbjct: 504 TENSNTMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADREH 563
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQI 720
+T EE+ + R++G M +LLGRRGI+DG IE +H HWK++E+VK+I K Q+
Sbjct: 564 LTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYA 623
Query: 721 AISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRRE 780
A LE E+GG+L++++K AII+YRGKNY RP K NLLT+R+AL RS+E+QRR
Sbjct: 624 ASLLEVETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRG 683
Query: 781 GLKHHILDLQERIELVKSELEEI 803
+K+ + + Q+ I +K +L +
Sbjct: 684 SMKYFVRERQKSILELKRKLRYV 706
>gi|222640429|gb|EEE68561.1| hypothetical protein OsJ_27045 [Oryza sativa Japonica Group]
Length = 725
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/591 (38%), Positives = 346/591 (58%), Gaps = 21/591 (3%)
Query: 228 VLPWKRNTDR------RRRSNTEL---AEKMIPEHELQRLRNISLRMLERTKVGSAGITQ 278
+PW D RR T + AE + EL+RLR + + AGIT
Sbjct: 124 AVPWAAARDEETKVVLRREKKTRVPTRAETELEAGELERLRRAARGKERWARAKKAGITD 183
Query: 279 ALVDSIHEKW-KLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
+V+ + +W K E+ ++ EP M R EILE +TGGLV+W G ++RG +Y
Sbjct: 184 EVVEEVRGQWAKGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTRGGIHFVYRGSSY 243
Query: 338 KLPCVQSFTKH----NHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEEL 393
+++ +H N+ ++ VT+ + G++ + + D A++ ++ +
Sbjct: 244 ----LENAKRHRDFVNYNEELSPVTSNNPTSQGKYWSKDETLTNDNDEADDKDDKPIKGT 299
Query: 394 MDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCET 453
+ E+N LLD LGPRF DW PLPVDADLLP VVPD+K P R P G++P L D E
Sbjct: 300 LYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVPDFKTPFRQCPPGVRPALADEEL 359
Query: 454 TEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELK 513
T R+ AR P HF LGRN +LQGLA A++KLWEKS IAK+A+K + NT +E+MA LK
Sbjct: 360 TYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQMARNLK 419
Query: 514 KLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERAR-HVASALIEL 572
+LTGGT++ RNKDYI+ YRG DFLP V ++V ER +Q +EE AR +A +L +
Sbjct: 420 RLTGGTVILRNKDYIIIYRGKDFLPGGVAESVIERESQVHDQQAKEEEARLKMADSLQMI 479
Query: 573 KAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAK 632
S V GT E R+ + E+ ++ ++ R L+ E +L++
Sbjct: 480 VGLSSERSYV-GTFREYQDFHDSHARR-TTENNFRIQLEAKKHRLEKELKDQEWRLSMLT 537
Query: 633 RKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTI 692
+K++ +++ LAK+ S P++ D E +T EER + RK+GL M ++LLGRRG+++G I
Sbjct: 538 KKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVI 597
Query: 693 ENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
E +H HWK++E+VK+I K +Q+ ++ LE E+GG L+++++ AII+YRGKNY
Sbjct: 598 EEIHQHWKHKEVVKVITKQNQASQITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNY 657
Query: 753 VRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEI 803
RP K P NLLT+R+AL RS+E+QRR +K+ + ++ I+ +K EL +
Sbjct: 658 RRPTKSAPSNLLTKREALQRSIEVQRRGSMKYFAQERKKSIDELKRELRNV 708
>gi|115476078|ref|NP_001061635.1| Os08g0360100 [Oryza sativa Japonica Group]
gi|75132343|sp|Q6YYA3.1|CRS1_ORYSJ RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|38637564|dbj|BAD03815.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113623604|dbj|BAF23549.1| Os08g0360100 [Oryza sativa Japonica Group]
Length = 725
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/591 (38%), Positives = 346/591 (58%), Gaps = 21/591 (3%)
Query: 228 VLPWKRNTDR------RRRSNTEL---AEKMIPEHELQRLRNISLRMLERTKVGSAGITQ 278
+PW D RR T + AE + EL+RLR + + AGIT
Sbjct: 124 AVPWAAARDEETKVVLRREKKTRVPTRAETELEAGELERLRRAARGKERWARAKKAGITD 183
Query: 279 ALVDSIHEKW-KLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
+V+ + +W K E+ ++ EP M R EILE +TGGLV+W G ++RG +Y
Sbjct: 184 EVVEEVRGQWAKGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTRGGIHFVYRGSSY 243
Query: 338 KLPCVQSFTKH----NHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEEL 393
+++ +H N+ ++ VT+ + G++ + + D A++ ++ +
Sbjct: 244 ----LENAKRHRDFVNYNEELSPVTSNNPTSQGKYWSKDETLTNDNDEADDKDDKPIKGT 299
Query: 394 MDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCET 453
+ E+N LLD LGPRF DW PLPVDADLLP VVPD+K P R P G++P L D E
Sbjct: 300 LYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVPDFKTPFRQCPPGVRPALADEEL 359
Query: 454 TEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELK 513
T R+ AR P HF LGRN +LQGLA A++KLWEKS IAK+A+K + NT +E+MA LK
Sbjct: 360 TYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQMARNLK 419
Query: 514 KLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERAR-HVASALIEL 572
+LTGGT++ RNKDYI+ YRG DFLP V ++V ER +Q +EE AR +A +L +
Sbjct: 420 RLTGGTVILRNKDYIIIYRGKDFLPGGVAESVIERESQVHDQQAKEEEARLKMADSLQMI 479
Query: 573 KAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAK 632
S V GT E R+ + E+ ++ ++ R L+ E +L++
Sbjct: 480 VGLSSERSYV-GTFREYQDFHDSHARR-TTENNFRIQLEAKKHRLEKELKDQEWRLSMLT 537
Query: 633 RKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTI 692
+K++ +++ LAK+ S P++ D E +T EER + RK+GL M ++LLGRRG+++G I
Sbjct: 538 KKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVI 597
Query: 693 ENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
E +H HWK++E+VK+I K +Q+ ++ LE E+GG L+++++ AII+YRGKNY
Sbjct: 598 EEIHQHWKHKEVVKVITKQNQASQITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNY 657
Query: 753 VRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEI 803
RP K P NLLT+R+AL RS+E+QRR +K+ + ++ I+ +K EL +
Sbjct: 658 RRPTKSAPSNLLTKREALQRSIEVQRRGSMKYFAQERKKSIDELKRELRNV 708
>gi|242078893|ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
gi|241940565|gb|EES13710.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
Length = 728
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/576 (39%), Positives = 326/576 (56%), Gaps = 39/576 (6%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKL-DEVVKLKFEEPHSL 304
AE + EL RLR ++ M + AG+T +V+ + +W +E+ ++ EP
Sbjct: 165 AETELETDELDRLRRLARGMGRWARAKKAGVTDEVVEEMRREWASGEELAAVRIVEPLRR 224
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
M R EILE +TGGLV+W G +++G Y Q KH+HT VTN +
Sbjct: 225 SMDRAREILEIKTGGLVVWTKGDIHFVYKGSKY-----QQNAKHSHTF----VTNVHKGS 275
Query: 365 VGEHPPRSAMESYVPDSANNLENLSKEELMDLC----ELNYLLDELGPRFKDWPGREPLP 420
+ + R + ++ ++ EE + E+N LLD LGPRF DW PLP
Sbjct: 276 LVKQNVRGEADDAFQENDQSICGQKDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLP 335
Query: 421 VDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAK 480
VDADLLP +P +K P R P G++P L D E T R+LAR P HFALGRN LQGLA
Sbjct: 336 VDADLLPEFIPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAA 395
Query: 481 AMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPV 540
A++KLWEKS IAKIA+K + NT NE+MA LK LTGGT++ RNKD+++ YRG DFLP
Sbjct: 396 AILKLWEKSLIAKIAVKVGIQNTNNEQMAWNLKHLTGGTVILRNKDFVILYRGKDFLPGG 455
Query: 541 VTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVA------GTL-------A 587
V V +R D Q +EE AR A +++ VG L + GT A
Sbjct: 456 VAQTVIQREAQVDDEQVKEEEARLKAVDSLQM-----VGELSSDEESSVGTFREYKDFHA 510
Query: 588 ETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQE 647
+ + A + + EK + L H E KL++ +K++ +++ALAK++
Sbjct: 511 DFVHANTEKSNTMIELEAEKYRLEKELKDH-------EWKLSILNKKIERSNQALAKLRS 563
Query: 648 SLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKI 707
S P+E +D E +T EE+ + R++G M +LLGRRGI+DG IE +H HWK++E+VK+
Sbjct: 564 SWSPSEQSADRELLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKV 623
Query: 708 IVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRR 767
I K Q+ A LE E+GG+L++++K AII+YRGKNY RP K NLLT+R
Sbjct: 624 ITKQNQARQIMYTANLLEVETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKR 683
Query: 768 QALARSVELQRREGLKHHILDLQERIELVKSELEEI 803
+AL RS+E+QRR +K+ + + Q+ I +K L +
Sbjct: 684 EALRRSLEVQRRGSMKYFVRERQKSISELKRRLRYV 719
>gi|326492786|dbj|BAJ90249.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 223/584 (38%), Positives = 326/584 (55%), Gaps = 38/584 (6%)
Query: 246 AEKMIPEHELQRLRNISLRMLER-TKVGSAGITQALVDSIHEKWKL-DEVVKLKFEEPHS 303
AE+++ EL RLR + + + AG+T +V+ + W E+ ++ EP
Sbjct: 150 AERLLDPAELDRLRRAARGTGDGWLRAKKAGVTDEVVEDVCRVWSGGQELAAVQVVEPLR 209
Query: 304 LQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY---------------KLP---CVQSF 345
M R EILE ++GGLV+W G ++RG +Y ++P C
Sbjct: 210 RCMDRAREILEIKSGGLVVWTKGDVHFVYRGSSYLENIKHRQKSIADIQRVPLEKCTAPG 269
Query: 346 TKHNHTQQTQDVTNE------VMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCEL 399
+ H + TN V R + P A+ +Y L E+
Sbjct: 270 PQWKHESNAEPSTNHNDDAHGVFRGID---PSLAVHAYEEPVEGTLYER---------EV 317
Query: 400 NYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRL 459
N LLD LGPRF DW PLPVDADLLP VVP +K P R P G++P L D E T R+L
Sbjct: 318 NRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEELTYLRKL 377
Query: 460 ARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGT 519
AR P HFALGRN LQGLA A++KLWEKS IAKIA+K + NT NE+MA LK LTGGT
Sbjct: 378 ARPLPTHFALGRNTRLQGLAAAVLKLWEKSLIAKIAVKVGIQNTNNEQMAWNLKHLTGGT 437
Query: 520 LLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVG 579
++ RNKD+++ YRG DFLP V +V E+ +Q +EE AR + +++ A
Sbjct: 438 IILRNKDFVILYRGKDFLPGGVKQSVIEQEARVYAQQVKEEEARLMVMDSLKMFAGLPSE 497
Query: 580 SLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMAD 639
G+ E ++ + ++ + ++ R L+ E++L + +K++ ++
Sbjct: 498 ESSVGSFREYQDFQLNHVQETTENNMALIELEAEKHRLEKELKDQERRLFILTKKIERSN 557
Query: 640 KALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHW 699
+ALAK+ S +P+E +D E +T EER + RK+GL M ++LLGRRGI+DG IE +H HW
Sbjct: 558 EALAKLHNSWNPSEQSADKELLTEEERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHW 617
Query: 700 KYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLR 759
K++E+VK+I K Q+ ++ LE E+GG+L++ K AII+YRGKNY RP K
Sbjct: 618 KHKEIVKVITKQNQAYQITYTSMLLEVETGGMLIATQKLTNSHAIILYRGKNYHRPTKSS 677
Query: 760 PQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEI 803
P NLLT+R+AL RSVE+QRR +K+++ + + IE ++ L +
Sbjct: 678 PSNLLTKREALRRSVEVQRRGSMKYYVWERHKSIEDLQWRLANV 721
>gi|326499694|dbj|BAJ86158.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 222/584 (38%), Positives = 325/584 (55%), Gaps = 38/584 (6%)
Query: 246 AEKMIPEHELQRLRNISLRMLER-TKVGSAGITQALVDSIHEKWKL-DEVVKLKFEEPHS 303
AE+++ EL RLR + + + AG+T +V+ + W E+ ++ EP
Sbjct: 150 AERLLDPAELDRLRRAARGTGDGWLRAKKAGVTDEVVEDVCRVWSGGQELAAVRVVEPLR 209
Query: 304 LQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY---------------KLP---CVQSF 345
M R EILE ++GGLV+W G ++RG +Y ++P C
Sbjct: 210 RCMDRAREILEIKSGGLVVWTKGDVHFVYRGSSYLENIKHRQKSIADIQRVPLEKCTAPG 269
Query: 346 TKHNHTQQTQDVTNE------VMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCEL 399
+ H + TN V R + P A+ +Y L E+
Sbjct: 270 PQWKHESNAEPSTNHNDDAHGVFRGID---PSLAVHAYEEPVEGTLYER---------EV 317
Query: 400 NYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRL 459
N LLD LGPRF DW PLPVDADLLP VVP +K P R P G++P L D E T R+L
Sbjct: 318 NRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEELTYLRKL 377
Query: 460 ARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGT 519
AR P HFALGRN LQGLA A++KLWEKS IAKIA+K + NT NE+MA LK LTGGT
Sbjct: 378 ARPLPTHFALGRNTRLQGLAAAVLKLWEKSLIAKIAVKVGIQNTNNEQMAWNLKHLTGGT 437
Query: 520 LLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVG 579
++ RNKD+++ YRG DFLP V +V E+ +Q +EE AR + +++ A
Sbjct: 438 IILRNKDFVILYRGKDFLPGGVKQSVIEQEARVYAQQVKEEEARLMVMDSLKMFAGLPSE 497
Query: 580 SLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMAD 639
G+ E ++ + ++ + ++ R L+ E++L + +K++ ++
Sbjct: 498 ESSVGSFREYQDFQLNHVQETTENNMALIELEAEKHRLEKELKDQERRLFILTKKIERSN 557
Query: 640 KALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHW 699
+ALAK+ S +P+E +D E +T EER + RK+GL M ++LLGRRGI+DG IE +H HW
Sbjct: 558 EALAKLHNSWNPSEQSADKELLTEEERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHW 617
Query: 700 KYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLR 759
K++E+VK+I K Q+ ++ LE E+GG+L++ K AII+YRGKNY RP K
Sbjct: 618 KHKEIVKVITKQNQAYQITYTSMLLEVETGGMLIATQKLTNSHAIILYRGKNYHRPTKSS 677
Query: 760 PQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEI 803
P NL T+R+AL RSVE+QRR +K+++ + + IE ++ L +
Sbjct: 678 PSNLRTKREALRRSVEVQRRGSMKYYVWERHKSIEDLQWRLANV 721
>gi|162463484|ref|NP_001105008.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic precursor [Zea mays]
gi|75173308|sp|Q9FYT6.1|CRS1_MAIZE RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|9837550|gb|AAG00595.1|AF290414_1 CRS1 [Zea mays]
Length = 715
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 221/535 (41%), Positives = 308/535 (57%), Gaps = 27/535 (5%)
Query: 274 AGITQALVDSIHEKWKL-DEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLF 332
AG+T +V + +W +E+ ++ EP M R EILE +TGGLV+W G ++
Sbjct: 194 AGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDMHFVY 253
Query: 333 RGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEE 392
RG Y Q KH+HT + NV H + E+ E K
Sbjct: 254 RGSKY-----QQNAKHSHT---------FLTNV--HKDDAFQENDQSICGQKDEEPVKGT 297
Query: 393 LMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCE 452
L + E+N LLD LGPRF DW PLPVDADLLP VP K P RL P G++P L D E
Sbjct: 298 LYER-EVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGSKTPYRLCPPGVRPTLADEE 356
Query: 453 TTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEEL 512
T R+LAR P HFALGRN LQGLA A++KLWEKS IAKIA+K + NT NE+MA L
Sbjct: 357 LTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMAWNL 416
Query: 513 KKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIEL 572
K LTGGT++ RNKD+I+ YRG DFLP V V +R Q +EE AR A +++
Sbjct: 417 KHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHDEQVKEEEARLKAVDSLQM 476
Query: 573 KAKGFVGSLVA----GTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKL 628
VG L GT E +++ + + + ++ R L+ E KL
Sbjct: 477 -----VGELSEESSLGTFREYQGFHAKFVHENTENSNTMIELEAEKYRLEKELKDHEWKL 531
Query: 629 ALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
++ +K++ +++ALAK+ S P+E +D E +T EE+ + R++G M +LLGRRGI+
Sbjct: 532 SVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRGIF 591
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
DG IE +H HWK++E+VK+I K Q+ A LE E+GG+L++++K AII+YR
Sbjct: 592 DGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIILYR 651
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEI 803
GKNY RP K NLLT+R+AL RS+E+QRR +K+ + + Q+ I +K +L +
Sbjct: 652 GKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYFVRERQKSILELKRKLRYV 706
>gi|218201029|gb|EEC83456.1| hypothetical protein OsI_28955 [Oryza sativa Indica Group]
Length = 514
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/498 (40%), Positives = 302/498 (60%), Gaps = 1/498 (0%)
Query: 306 MKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNV 365
M R EILE +TGGLV+W G ++RG +Y Q N+ ++ VT+ +
Sbjct: 1 MDRAREILEIKTGGLVVWTRGGIHFVYRGSSYLENAKQHRDFVNYNEELSPVTSNNPTSQ 60
Query: 366 GEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADL 425
G++ + + D A++ ++ + + E+N LLD LGPRF DW PLPVDADL
Sbjct: 61 GKYWSKDETLTNDNDEADDKDDKPIKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADL 120
Query: 426 LPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKL 485
LP VVPD+K P R P G++P L D E T R+ AR P HF LGRN +LQGLA A++KL
Sbjct: 121 LPEVVPDFKTPFRQCPPGVRPTLADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKL 180
Query: 486 WEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAV 545
WEKS IAK+A+K + N+ +E+MA LK+LTGGT++ RNKDYI+ YRG DFLP V ++V
Sbjct: 181 WEKSLIAKVAVKVGIQNSNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFLPGGVAESV 240
Query: 546 KERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDV 605
E+ +Q +EE AR + +++ GT E R+ + E+
Sbjct: 241 IEQESQVHDQQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSHARRTT-ENN 299
Query: 606 EKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEE 665
++ ++ R L+ E +L++ +K++ +++ LAK+ S P++ D E +T EE
Sbjct: 300 FRIQLEAKKHRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELLTEEE 359
Query: 666 RFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLE 725
R + RK+GL M ++LLGRRG+++G IE +H HWK++E+VK+I K Q+ ++ LE
Sbjct: 360 RRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQITYTSMMLE 419
Query: 726 AESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHH 785
E+GG L+++++ AII+YRGKNY RP K P NLLT+R+AL RS+E+QRR +K+
Sbjct: 420 VETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGSMKYF 479
Query: 786 ILDLQERIELVKSELEEI 803
+ ++ I+ +K EL +
Sbjct: 480 AQERKKSIDELKRELRNV 497
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 248 KMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMK 307
+++ E E + R I L+M E +G G+ + +++ IH+ WK EVVK+ ++ + Q+
Sbjct: 353 ELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQIT 412
Query: 308 RTHEILERRTGGLVI----WRSGSSVVLFRGMAYKLPC 341
T +LE TGG +I + + +++L+RG Y+ P
Sbjct: 413 YTSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPT 450
>gi|186523322|ref|NP_197122.2| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|332004875|gb|AED92258.1| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
Length = 720
Score = 355 bits (912), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 226/581 (38%), Positives = 317/581 (54%), Gaps = 57/581 (9%)
Query: 229 LPWKRNTDR------RRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVD 282
+PW+R +R ++ S AE ++ E L RLR + +M + V AG+T+ +V+
Sbjct: 180 MPWEREEERFILRRMKKESVPTTAELILDEGLLNRLRREASKMRKWVNVRKAGVTELVVN 239
Query: 283 SIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCV 342
I WKL+E+ ++F+ P M+R EI+E +TGGLV+ +V++RG
Sbjct: 240 KIKSMWKLNELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLVVYRG-------- 291
Query: 343 QSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYL 402
+++ + QD E+ ++ E E + L
Sbjct: 292 ----GPSYSSEGQD---EISSSLYER-----------------------------EADRL 315
Query: 403 LDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARK 462
LD LGPR+ DW R P PVDADLLP VV Y P R P + L D E T R +A+
Sbjct: 316 LDGLGPRYMDWWMRRPFPVDADLLPEVVNGYMTPSRRCPPNTRAKLTDEELTYLRNIAQP 375
Query: 463 TPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLC 522
P HF LGRN LQGLA A+VKLWEK IAKIAIK +NT NE MA+EL+ LTGG L+
Sbjct: 376 LPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELRYLTGGVLIL 435
Query: 523 RNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKG--FVGS 580
RNK IV YRG DFL V D V++R +L Q EE R L+E+ G +
Sbjct: 436 RNKYLIVLYRGKDFLSDEVADLVEDRERLLSRYQHFEETKRESDIELLEVVTNGKQLKET 495
Query: 581 LVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADK 640
+GTL E ++G D + ++ +R L+ E KL++ K K++ ++
Sbjct: 496 NKSGTLLEFQELQRKFGEM----DPRNLETEAEKARLEKELKSQEHKLSILKSKIEKSNM 551
Query: 641 ALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWK 700
L K+ P+E D+E +TNEER LR++GL M L+LGRRG++ G +E +H HWK
Sbjct: 552 ELFKLNSLWKPSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWK 611
Query: 701 YRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP-LKLR 759
+RE+ K+I K F++V A +LE ES GVL+S++K +G AI++YRGKNY RP KL
Sbjct: 612 HREVAKVITMQKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLM 671
Query: 760 PQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
QNLLT+R+AL RSV +QR LK + IE +K L
Sbjct: 672 AQNLLTKRKALQRSVVMQRLGSLKFFAYQRERAIEDLKVSL 712
>gi|242076096|ref|XP_002447984.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
gi|241939167|gb|EES12312.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
Length = 800
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 198/410 (48%), Positives = 265/410 (64%), Gaps = 32/410 (7%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF W G +PLPVDADLLP +VP Y+ P RLLP G+ P L D E T R
Sbjct: 388 EADKLLDGLGPRFSGWWGYDPLPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 447
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLA P H+ALGR+ LQGLA +M+KLWE+ +AKIA+KRD NT +E + EE+K LTG
Sbjct: 448 RLAHPLPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEIKDLTG 507
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDI-----RQDEEERARHVASALIEL 572
GTLL R+K+ IVFYRG DFLPP V+ A+++R KL + D EE +++++
Sbjct: 508 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKPKPDIEENMPTQDDSVLKV 567
Query: 573 KAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAK 632
V GT + A S ++ + +E +L+ A
Sbjct: 568 SNDVSVHIREEGTSVTEVRAKSL----------------------NTVAKNVEARLSQAI 605
Query: 633 RKLKMADKALAKVQES--LDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDG 690
+ + A+K L +++++ L AE+ ETI+ +ER++LRK+GL MK +LLLGRRG++DG
Sbjct: 606 AEKERAEKLLEELEKASPLSKAEV---RETISEDERYMLRKVGLKMKQFLLLGRRGVFDG 662
Query: 691 TIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGK 750
TIENMHLHWKYRELVKII K V+ A +LEAESGG+LV+++K KG AIIVYRGK
Sbjct: 663 TIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYRGK 722
Query: 751 NYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
NY RP KLRP+ LL++R AL RSVE QR + LK H+L L + I+ +K ++
Sbjct: 723 NYQRPSKLRPKTLLSKRDALKRSVENQRCKSLKVHVLKLSKNIDYLKDQM 772
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 74/94 (78%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
E +P EL+RL+ I +R+ +R KVG AGIT+ +V+ IHE+W+ EVVKL+ E+ ++ M
Sbjct: 142 ELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNM 201
Query: 307 KRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLP 340
+RTHEILER+TGGLVIWRSGS+++L+RG YK P
Sbjct: 202 RRTHEILERKTGGLVIWRSGSTIILYRGTNYKYP 235
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 669 LRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAES 728
L+ +G+ ++ L +G+ GI +G + +H W+ E+VK+ + +++ LE ++
Sbjct: 153 LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILERKT 212
Query: 729 GGVLVSLDKTPKGIAIIVYRGKNYVRP 755
GG+++ G II+YRG NY P
Sbjct: 213 GGLVIWR----SGSTIILYRGTNYKYP 235
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 250 IPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRT 309
I E E LR + L+M + +G G+ ++++H WK E+VK+ +E ++
Sbjct: 633 ISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVEYA 692
Query: 310 HEILERRTGGLVIW----RSGSSVVLFRGMAYKLPC 341
LE +GG+++ G +++++RG Y+ P
Sbjct: 693 ARTLEAESGGILVAVEKVSKGHAIIVYRGKNYQRPS 728
>gi|154986383|gb|ABS89145.1| CFM2 [Zea mays]
Length = 942
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 197/409 (48%), Positives = 259/409 (63%), Gaps = 30/409 (7%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF W G +P+PVDADLLP +VP Y+ P RLLP G+ P L D E T R
Sbjct: 286 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 345
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLA P H+ALGR+ LQGLA +M+KLWE+ +AKIA+KRD NT +E + EE+K+LTG
Sbjct: 346 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 405
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
GTLL R+K+ IVFYRG DFLPP V+ A+++R KL S+ I KAK
Sbjct: 406 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKL--------------GSSTI-YKAKPG 450
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKM 637
+ + L +S DV +R+ S + L + +L
Sbjct: 451 IEESMPTQNDSVLKVSS---------DVSVHVREEGTSVTENRAESLNTVAKDVETRLSQ 501
Query: 638 ADKALAKVQESLDPAELPSDL------ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGT 691
A AK ++ ++ E S L ETI+ +ER++LRK+GL MK +LLLGRRG++DGT
Sbjct: 502 AIAEKAKAEKLIEELEKASPLSKAEVRETISEDERYMLRKVGLKMKQFLLLGRRGVFDGT 561
Query: 692 IENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN 751
IENMHLHWKYRELVKII K V+ A +LEAESGG+LV+++K KG AIIVYRGKN
Sbjct: 562 IENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYRGKN 621
Query: 752 YVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
Y RP KLRP+ LL++R AL RS+E QR + LK H+L L + I+ ++ ++
Sbjct: 622 YKRPSKLRPKTLLSKRDALKRSLENQRCKSLKVHVLKLSKNIDYLRDQM 670
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 80/116 (68%), Gaps = 6/116 (5%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQ 305
AE +P EL+RL+ I +R+ +R KVG AGIT+ +V+ IHE+W+ EVVKL+ E+ ++
Sbjct: 42 AELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMN 101
Query: 306 MKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC------VQSFTKHNHTQQTQ 355
M+RTHEILER+TGGLVIWRSGS+++L+RG Y P V SF + Q+
Sbjct: 102 MRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESSDQSN 157
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 648 SLDPAELPSDLE-TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVK 706
S P+ PS E + +E L+ +G+ ++ L +G+ GI +G + +H W+ E+VK
Sbjct: 32 SGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVK 91
Query: 707 IIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
+ + +++ LE ++GG+++ G II+YRG NY P
Sbjct: 92 LRCEDVWAMNMRRTHEILERKTGGLVI----WRSGSTIILYRGTNYTYP 136
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 661 ITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ-V 717
++N+ER +LRK L MK P L +GR G + + H+K L + +K ++ +
Sbjct: 812 LSNQERLVLRKQALQMKKRPVLSIGRNNAITGVAKTIKTHFKKHPLAIVNIKNRADGTPI 871
Query: 718 KQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
+Q+ LE +G VLVS + +I+YRG
Sbjct: 872 QQLISELEEATGSVLVSRETN----KVILYRG 899
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 250 IPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRT 309
I E E LR + L+M + +G G+ ++++H WK E+VK+ +E ++
Sbjct: 531 ISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVEYA 590
Query: 310 HEILERRTGGLVIW----RSGSSVVLFRGMAYKLP 340
LE +GG+++ G +++++RG YK P
Sbjct: 591 ARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRP 625
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 436 PLRLLPYGIKPGLRDCETTEFRR--LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAK 493
PLR P L + E R+ L K P ++GRN + G+AK + ++K +A
Sbjct: 806 PLRAAP------LSNQERLVLRKQALQMKKRPVLSIGRNNAITGVAKTIKTHFKKHPLAI 859
Query: 494 IAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRG 533
+ IK T +++ EL++ TG L+ R + ++ YRG
Sbjct: 860 VNIKNRADGTPIQQLISELEEATGSVLVSRETNKVILYRG 899
>gi|224127512|ref|XP_002329296.1| predicted protein [Populus trichocarpa]
gi|222870750|gb|EEF07881.1| predicted protein [Populus trichocarpa]
Length = 687
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 224/573 (39%), Positives = 313/573 (54%), Gaps = 55/573 (9%)
Query: 229 LPWKR-----NTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDS 283
LPW R N ++ AE + + L+RLR + +M KV AG+TQ++VD
Sbjct: 117 LPWVREERVGNWRMKKEKVVSKAELSLDKELLERLRGEAAKMRTWVKVKKAGVTQSVVDE 176
Query: 284 IHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQ 343
I W+ E+ +KF P M R +I+E TGGLV+W V++RG Y+
Sbjct: 177 IRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TGGLVVWTRKDIHVVYRGCNYQW---- 230
Query: 344 SFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLL 403
K N T + N+ P ++ E + LL
Sbjct: 231 ---KKNFNTAT------IEENLNTQPINGSLFER--------------------ETDRLL 261
Query: 404 DELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKT 463
D LGPRF DW R+PLPVDADLLP VV ++ P RL P ++ L+D E T R+LA+
Sbjct: 262 DGLGPRFVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRMRSKLKDDELTYLRKLAQSL 321
Query: 464 PPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELK---------- 513
P HF LGRNR LQGLA A++KLWEK+ IAKIA+K V NT NE+MA+ELK
Sbjct: 322 PTHFVLGRNRRLQGLAAAILKLWEKTIIAKIAVKWGVPNTNNEQMADELKAKIFLMLMLY 381
Query: 514 --KLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIE 571
LTGG LL RNK +I+ YRG DFLP V + + +R Q EE AR A
Sbjct: 382 TQSLTGGVLLLRNKFFIILYRGKDFLPGQVANVIVDREIALRKCQTNEEGARMKAIETSY 441
Query: 572 LKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALA 631
+ G + GTL E ++ Q + + ++ ++ + LR E +L +
Sbjct: 442 MPG-GPTNTSRCGTLYEFQEFQIKF--QKTAKGDSEIQLEAYKEKLERELRNQEYRLRIL 498
Query: 632 KRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGT 691
K K++ K L+K+ + P+ +D +T EER RK+GL ++ L+LGRRG+++G
Sbjct: 499 KSKIEKPAKDLSKLNSAWVPSPRDADQGIMTEEERECFRKIGLKLRGSLVLGRRGVFEGV 558
Query: 692 IENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN 751
+E +H HWK+RE+VK+I + F+QV A LEAES G+LVS+DK +G AII+YRGKN
Sbjct: 559 MEGLHQHWKHREVVKVITMQRVFSQVIHTATLLEAESDGILVSVDKLKEGHAIIIYRGKN 618
Query: 752 YVRPLKLRPQNLLTRRQALARSVELQRREGLKH 784
Y RPL+L +NLLT+R+AL RS+ +QR LK+
Sbjct: 619 YKRPLRLLKKNLLTKREALKRSLLIQRVGSLKY 651
>gi|413918579|gb|AFW58511.1| CFM2 [Zea mays]
Length = 1039
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 194/415 (46%), Positives = 264/415 (63%), Gaps = 42/415 (10%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF W G +P+PVDADLLP +VP Y+ P RLLP G+ P L D E T R
Sbjct: 383 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 442
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLA P H+ALGR+ LQGLA +M+KLWE+ +AKIA+KRD NT +E + EE+K+LTG
Sbjct: 443 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 502
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTD-----IRQDEEERARHVASALIEL 572
GTLL R+K+ IVFYRG DFLPP V+ A+++R KL + EE +++++
Sbjct: 503 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKAKPGIEESMPTQNDSVLKV 562
Query: 573 KAKGFV-----GSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHAS--LLRYLE 625
+ V G+ V AE+L ++ DVE + + + + L+ LE
Sbjct: 563 SSDVSVHVREEGTSVTENRAESLNTVAK--------DVETRLSQAIAEKAKAEKLIEELE 614
Query: 626 QKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRR 685
+ L+K +++ ETI+ +ER++LRK+GL MK +LLLGRR
Sbjct: 615 KASPLSKAEVR----------------------ETISEDERYMLRKVGLKMKQFLLLGRR 652
Query: 686 GIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAII 745
G++DGTIENMHLHWKYRELVKII K V+ A +LEAESGG+LV+++K KG AII
Sbjct: 653 GVFDGTIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAII 712
Query: 746 VYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
VYRGKNY RP KLRP+ LL++R AL RS+E QR + LK H+L L + I+ ++ ++
Sbjct: 713 VYRGKNYKRPSKLRPKTLLSKRDALKRSLENQRCKSLKVHVLKLSKNIDYLRDQM 767
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 80/116 (68%), Gaps = 6/116 (5%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQ 305
AE +P EL+RL+ I +R+ +R KVG AGIT+ +V+ IHE+W+ EVVKL+ E+ ++
Sbjct: 139 AELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMN 198
Query: 306 MKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC------VQSFTKHNHTQQTQ 355
M+RTHEILER+TGGLVIWRSGS+++L+RG Y P V SF + Q+
Sbjct: 199 MRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESSDQSN 254
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 661 ITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ-V 717
++N+ER +LRK L MK P L +GR G + + H+K L + +K ++ +
Sbjct: 909 LSNQERLVLRKQALQMKKRPVLSIGRNNAITGVAKTIKTHFKKHPLAIVNIKNRADGTPI 968
Query: 718 KQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
+Q+ LE +G VLVS + +I+YRG
Sbjct: 969 QQLISELEEATGSVLVSRETN----KVILYRG 996
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 648 SLDPAELPSDLE-TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVK 706
S P+ PS E + +E L+ +G+ ++ L +G+ GI +G + +H W+ E+VK
Sbjct: 129 SGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVK 188
Query: 707 IIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
+ + +++ LE ++GG+++ G II+YRG NY P
Sbjct: 189 LRCEDVWAMNMRRTHEILERKTGGLVIWR----SGSTIILYRGTNYTYP 233
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 250 IPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRT 309
I E E LR + L+M + +G G+ ++++H WK E+VK+ +E ++
Sbjct: 628 ISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVEYA 687
Query: 310 HEILERRTGGLVIW----RSGSSVVLFRGMAYKLP 340
LE +GG+++ G +++++RG YK P
Sbjct: 688 ARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRP 722
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 436 PLRLLPYGIKPGLRDCETTEFRR--LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAK 493
PLR P L + E R+ L K P ++GRN + G+AK + ++K +A
Sbjct: 903 PLRAAP------LSNQERLVLRKQALQMKKRPVLSIGRNNAITGVAKTIKTHFKKHPLAI 956
Query: 494 IAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRG 533
+ IK T +++ EL++ TG L+ R + ++ YRG
Sbjct: 957 VNIKNRADGTPIQQLISELEEATGSVLVSRETNKVILYRG 996
>gi|9755828|emb|CAC01859.1| putative protein [Arabidopsis thaliana]
Length = 718
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 226/581 (38%), Positives = 316/581 (54%), Gaps = 59/581 (10%)
Query: 229 LPWKRNTDR------RRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVD 282
+PW+R +R ++ S AE ++ E L RLR + +M + V AG+T+ +V+
Sbjct: 180 MPWEREEERFILRRMKKESVPTTAELILDEGLLNRLRREASKMRKWVNVRKAGVTELVVN 239
Query: 283 SIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCV 342
I WKL+E+ ++F+ P M+R EI+E TGGLV+ +V++RG
Sbjct: 240 KIKSMWKLNELAMVRFDVPLCRNMERAQEIIE--TGGLVVLSKKEFLVVYRG-------- 289
Query: 343 QSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYL 402
+++ + QD E+ ++ E E + L
Sbjct: 290 ----GPSYSSEGQD---EISSSLYER-----------------------------EADRL 313
Query: 403 LDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARK 462
LD LGPR+ DW R P PVDADLLP VV Y P R P + L D E T R +A+
Sbjct: 314 LDGLGPRYMDWWMRRPFPVDADLLPEVVNGYMTPSRRCPPNTRAKLTDEELTYLRNIAQP 373
Query: 463 TPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLC 522
P HF LGRN LQGLA A+VKLWEK IAKIAIK +NT NE MA+EL+ LTGG L+
Sbjct: 374 LPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELRYLTGGVLIL 433
Query: 523 RNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKG--FVGS 580
RNK IV YRG DFL V D V++R +L Q EE R L+E+ G +
Sbjct: 434 RNKYLIVLYRGKDFLSDEVADLVEDRERLLSRYQHFEETKRESDIELLEVVTNGKQLKET 493
Query: 581 LVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADK 640
+GTL E ++G D + ++ +R L+ E KL++ K K++ ++
Sbjct: 494 NKSGTLLEFQELQRKFGEM----DPRNLETEAEKARLEKELKSQEHKLSILKSKIEKSNM 549
Query: 641 ALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWK 700
L K+ P+E D+E +TNEER LR++GL M L+LGRRG++ G +E +H HWK
Sbjct: 550 ELFKLNSLWKPSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWK 609
Query: 701 YRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP-LKLR 759
+RE+ K+I K F++V A +LE ES GVL+S++K +G AI++YRGKNY RP KL
Sbjct: 610 HREVAKVITMQKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLM 669
Query: 760 PQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
QNLLT+R+AL RSV +QR LK + IE +K L
Sbjct: 670 AQNLLTKRKALQRSVVMQRLGSLKFFAYQRERAIEDLKVSL 710
>gi|357516865|ref|XP_003628721.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355522743|gb|AET03197.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 387
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/391 (50%), Positives = 252/391 (64%), Gaps = 24/391 (6%)
Query: 261 ISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGL 320
++L M+ER VG AGIT LVD+IHEKW +DEVVK KF+ P S MKR ++ILE +TGG+
Sbjct: 1 MALMMVERFGVGVAGITHELVDAIHEKWMVDEVVKFKFDSPLSANMKRANQILESKTGGI 60
Query: 321 VIWRSGSSVVLFRGMAYKLPCVQSFTK-HNHTQQTQDVTNEVMRNVGEHPPRSAM----E 375
V+WR GSS+VL+RGM+YKLPCV+S+TK +N + D + +V M E
Sbjct: 61 VVWRLGSSIVLYRGMSYKLPCVESYTKVYNANENAVDNSVDVRSGSSVEVSVKVMVGPAE 120
Query: 376 SYVPDSANNLEN-LSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYK 434
S+ DSA L++ +EE M+ +LN LLDELGPRFKDW GREPL VDAD LP VVP YK
Sbjct: 121 SFNRDSAEYLKDMSEEEESMESIKLNLLLDELGPRFKDWTGREPLTVDADQLPVVVPGYK 180
Query: 435 PPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKI 494
P RLLPYG+KP L + E T RR+AR+T HFAL GLA+A+VKLWE SA+AKI
Sbjct: 181 TPFRLLPYGVKPCLSNKEMTVMRRIARRTALHFAL-------GLARAIVKLWETSAVAKI 233
Query: 495 AIKRDVMNTRNERMAEELKKLTGGTLLCRNKDY-----------IVFYRGNDFLPPVVTD 543
AI+ V T N+RMAEELK L + + FY + VT
Sbjct: 234 AIRHGVPYTSNDRMAEELKVFLINFCLMHQLKHEHIHSLIIFMGVSFYGAMTYCLLSVTK 293
Query: 544 AVKERSKLTDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYE 603
+ ER KLT ++QDEEE+AR AS++ +K L+AGTLAET AAT+ WG QPS +
Sbjct: 294 TLTERQKLTVLQQDEEEKARQNASSITLSNSKSSQMQLLAGTLAETRAATANWGHQPSKQ 353
Query: 604 DVEKMMRDSTLSRHASLLRYLEQKLALAKRK 634
+V KM+R+STL R +SL+R E KLAL K
Sbjct: 354 EVGKMIRESTLDRLSSLIRNHESKLALVSYK 384
>gi|302781424|ref|XP_002972486.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
gi|300159953|gb|EFJ26572.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
Length = 795
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 207/498 (41%), Positives = 293/498 (58%), Gaps = 35/498 (7%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
LAE IPE EL+RL+ I++R++ KVG G+T+A+V IH +W+ EVVK+ +P +
Sbjct: 207 LAELTIPELELRRLQRIAIRVVNPIKVGYLGVTKAVVQDIHRRWQKCEVVKI---QPKNW 263
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVT-NEVMR 363
+ WR+G L+RG Y S + Q + + E ++
Sbjct: 264 WLSSMEN-----------WRNGH---LYRGKGYFARVDNSMVANLKKYQRRKINLMEAIK 309
Query: 364 NVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDA 423
E R +S ++ + E + E+ L E++ LL+ELGPR+ DW GR+P+PVD
Sbjct: 310 IRDEDEDRDYSQSEHGEARRDSEKGNIEDEY-LDEIDALLEELGPRYDDWIGRKPVPVDG 368
Query: 424 DLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMV 483
DLLP VP YKPPLR+LPY K L + E T RRL + PPHF LGRNR LQGLA A++
Sbjct: 369 DLLPASVPGYKPPLRMLPYRAKKNLSNMELTVLRRLVKPLPPHFVLGRNRGLQGLASAIL 428
Query: 484 KLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTD 543
KLW+KS + KI +KR V NTRN+ MAEEL++LTGG LL R+K +I YRG DFLP V
Sbjct: 429 KLWQKSELVKIGLKRGVQNTRNQLMAEELERLTGGVLLSRDKFFITLYRGKDFLPTSVAA 488
Query: 544 AVKERSKLTDIRQDEEERARHVASALIELKAKGFVG------SLVAGTLAETLAATSRWG 597
++ER E R + +++ +G + V+G+L+E++ +W
Sbjct: 489 VLRER----------ESNMRELLLKEDQVRIPAQIGDGQNRTTPVSGSLSESMEMRRQWE 538
Query: 598 RQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSD 657
Q S +D E + ++ + LE KLA A K + AD + K++ SL +E P D
Sbjct: 539 AQRSEKDDEMDRNSAVVALKVREQKRLEAKLAAAISKKRRADLQIVKLERSLLLSEHPRD 598
Query: 658 LETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQV 717
ETIT EER++ +K+GL M +LL+GRRG++DG IENMHLHWK+RELVK+I+K K A
Sbjct: 599 RETITEEERYMFKKLGLRMDAFLLIGRRGVFDGVIENMHLHWKHRELVKLILKEKDKAIA 658
Query: 718 KQIAISLEAESGGVLVSL 735
++A LE ESGG+LV +
Sbjct: 659 LEVAKMLEIESGGILVGV 676
>gi|296087258|emb|CBI33632.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 198/410 (48%), Positives = 261/410 (63%), Gaps = 2/410 (0%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF DW +PLPVDADLLP V+P ++PP RL P + L D E T R
Sbjct: 73 EADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLR 132
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
+LA P HF LGRNR+LQGLA A++KLWEKS I KIAIK + NT+NE+MA ELK LTG
Sbjct: 133 KLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTG 192
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
G LL RNK +I+ YRG DFLP V + + ER Q EE AR A + K
Sbjct: 193 GVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDKPL 252
Query: 578 VGSLVAGTLAETLAATSRW-GRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLK 636
+ GTL+E + + G + ++E + ++ R L+ E+ L + KRK++
Sbjct: 253 ANTSTTGTLSEFQNIETEFRGLKDGNTEIEVEL-EAEKERLEKELKKQERNLFILKRKIE 311
Query: 637 MADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMH 696
+ K LAK+ + PA+ +D E IT EER RK+G M LLLGRRG++DG IE +H
Sbjct: 312 RSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLH 371
Query: 697 LHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPL 756
HWK+RE+VK+I +SF+QV A LE+ESGGVLVS+DK +G AII+YRGKNY RP+
Sbjct: 372 QHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPI 431
Query: 757 KLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIEGG 806
KL P+NLLT+R+AL RS+E+QR LK Q+ I +K +L +++ G
Sbjct: 432 KLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLADLQKG 481
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 239 RRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKF 298
R ++ + ++MI E E + R I +M +G G+ +++ +H+ WK E+VK+
Sbjct: 325 RPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVIT 384
Query: 299 EEPHSLQMKRTHEILERRTGGLVI----WRSGSSVVLFRGMAYKLP 340
+ Q+ T ++LE +GG+++ + G +++++RG Y+ P
Sbjct: 385 MQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRP 430
>gi|357167767|ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 1053
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 195/415 (46%), Positives = 262/415 (63%), Gaps = 43/415 (10%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF W G +PLPVDADLLP +VP ++ P RLLP G+ L D E T R
Sbjct: 392 EGDKLLDGLGPRFSGWWGYDPLPVDADLLPAIVPGFRRPFRLLPSGVPSKLTDREMTILR 451
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLAR P H+ALGR+ LQGLA +M+KLWE+ +AKIAIKR +E ++EELK LTG
Sbjct: 452 RLARPLPYHYALGRSSNLQGLAVSMIKLWERCEVAKIAIKRGAYCIDSELVSEELKGLTG 511
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
GTLL R+ IVFYRG DFL P V+ A+ E+R +H S +LK
Sbjct: 512 GTLLSRDNKSIVFYRGKDFLSPAVSLAI-------------EKRRKHSNSTTGKLKP--- 555
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHA---------SLLRYLEQKL 628
ET +TS Q + E KM D++++ H + L + Q +
Sbjct: 556 ----------ETEESTST---QDASE--LKMTSDASVNGHECHEEKNEGETSLNTVAQNV 600
Query: 629 ALAKRKLKMADKALAKVQESLDPAELPSDLET---ITNEERFLLRKMGLSMKPYLLLGRR 685
+ + + + K+ E L+ A PS ET I++EER++LRK+GL MKP+LLLGRR
Sbjct: 601 EIRLSQAIVEKEKAEKLLEELEKASQPSKAETREHISDEERYMLRKIGLQMKPFLLLGRR 660
Query: 686 GIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAII 745
G++DGTIENMHLHWKYRELVKII K S V+ A +LE++SGG+LV++++ KG AII
Sbjct: 661 GVFDGTIENMHLHWKYRELVKIICKEHSMKDVEYAARTLESQSGGILVAVERVSKGHAII 720
Query: 746 VYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
+YRGKNY RP LRP++LL +R AL RSVE QR++ LK H+L+L + I+ ++ ++
Sbjct: 721 MYRGKNYHRPSTLRPKSLLNKRDALKRSVEYQRQKSLKLHVLNLSKNIDYLRGQM 775
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 74/95 (77%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQ 305
AE +P EL+RL+ + +R+ +R KVG G+T+ +V+ IHE+W+ E+VK++ ++ ++
Sbjct: 136 AELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNVELVKIRCDDVSAMN 195
Query: 306 MKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLP 340
M+RTHEILER+TGGLVIWRSGS+++L+RG YK P
Sbjct: 196 MRRTHEILERKTGGLVIWRSGSTIILYRGTNYKYP 230
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 123/602 (20%), Positives = 222/602 (36%), Gaps = 135/602 (22%)
Query: 250 IPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEE-PHSLQMKR 308
+ + E+ LR ++ + +G + Q L S+ + W+ EV K+ + + + +
Sbjct: 442 LTDREMTILRRLARPLPYHYALGRSSNLQGLAVSMIKLWERCEVAKIAIKRGAYCIDSEL 501
Query: 309 THEILERRTGGLVIWRSGSSVVLFRGMAYKLPC----VQSFTKHNHTQ------------ 352
E L+ TGG ++ R S+V +RG + P ++ KH+++
Sbjct: 502 VSEELKGLTGGTLLSRDNKSIVFYRGKDFLSPAVSLAIEKRRKHSNSTTGKLKPETEEST 561
Query: 353 QTQD-----VTNEVMRNVGE-HPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDEL 406
TQD +T++ N E H ++ E+ + A N+E + +++ + LL+EL
Sbjct: 562 STQDASELKMTSDASVNGHECHEEKNEGETSLNTVAQNVEIRLSQAIVEKEKAEKLLEEL 621
Query: 407 GPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPH 466
+ P A+ + + D E R++ + P
Sbjct: 622 E--------KASQPSKAE-------------------TREHISDEERYMLRKIGLQMKPF 654
Query: 467 FALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLC---- 522
LGR G + M W+ + KI K M E A L+ +GG L+
Sbjct: 655 LLLGRRGVFDGTIENMHLHWKYRELVKIICKEHSMKDV-EYAARTLESQSGGILVAVERV 713
Query: 523 ---------RNKDY----------------------------------IVFYRGNDFLPP 539
R K+Y + + D+L
Sbjct: 714 SKGHAIIMYRGKNYHRPSTLRPKSLLNKRDALKRSVEYQRQKSLKLHVLNLSKNIDYLRG 773
Query: 540 VVTDAVKERSKLTDIRQDE---EERARHVASALIELKAKGFVGSLVAGTLAETLAATSRW 596
+ + E + D+ EE++ VA + + + S GTL T +
Sbjct: 774 QMVSFIHENKGINDLSNSSGTLEEKSEEVAPEGFDSEGQDSTSSGTDGTLNLTKSGVPLD 833
Query: 597 GRQ----------PSYEDVEKMMRDSTLSRHASLLRYLEQKLALA------------KRK 634
RQ S E + +S+ + ++ L + +L+ A R
Sbjct: 834 DRQNKLCFNKHKDDSSEASRPCLNESSSTVSSNDLIKYQNRLSSAIACHSDNDSESYSRD 893
Query: 635 LKMADKALA----KVQESLDPAELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIY 688
+++ A K+ E P LP ++N ER +LRK L MK P L +GR +
Sbjct: 894 VEIVKPCQALDEPKLDEKCTPY-LPFRTAPLSNRERLMLRKQALKMKKRPVLAIGRNNVI 952
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQ-VKQIAISLEAESGGVLVSLDKTPKGIAIIVY 747
G + + H+K L + +K ++ V+Q+ LE +G VLVS + +I+Y
Sbjct: 953 TGVAKTIQTHFKKHPLAIVNIKNRADGTPVQQLISELERATGSVLVSREPN----KVILY 1008
Query: 748 RG 749
RG
Sbjct: 1009 RG 1010
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 638 ADKALAKVQESLDPA--ELPSDLE-TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIEN 694
AD A + + D A PS E T+ +E L+ +G+ ++ L +G+ G+ +G +
Sbjct: 114 ADTARRRRRGGRDAAVPSPPSAAELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNG 173
Query: 695 MHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVR 754
+H W+ ELVKI S +++ LE ++GG+++ G II+YRG NY
Sbjct: 174 IHERWRNVELVKIRCDDVSAMNMRRTHEILERKTGGLVI----WRSGSTIILYRGTNYKY 229
Query: 755 P 755
P
Sbjct: 230 P 230
>gi|116310121|emb|CAH67138.1| OSIGBa0130P02.2 [Oryza sativa Indica Group]
Length = 1048
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 187/406 (46%), Positives = 259/406 (63%), Gaps = 18/406 (4%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF DW G +PLPVDADLLP +VP Y+ P RLLP G+ P L D E T R
Sbjct: 365 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYRRPFRLLPSGVPPRLTDREMTILR 424
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLAR P H+ALGR+ LQGLA +M+KLWE+ +AK+AIKR N ++ ++E+LK LTG
Sbjct: 425 RLARPLPYHYALGRSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 484
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
GTLL R+ + IVFYRG DFLP V+ A+++R R ++ I F
Sbjct: 485 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKR--------------RKYGNSTISNPKLNF 530
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY---LEQKLALAKRK 634
S + +A YE K + +R SL + +E +L+ A +
Sbjct: 531 DKSTPQNSSKLKMATDVSLDGHECYEKKHKDETAVSDNRAESLNVFTQNVEARLSQAIAE 590
Query: 635 LKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIEN 694
+ +K + +++ S +P+ + E I+ EER++LRK+GL MK +LLLGRRG++DGT+EN
Sbjct: 591 KEKTEKLIEELEMSSEPSRAETR-EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVEN 649
Query: 695 MHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVR 754
MHLHWKYRELVKII K + V+ A +LEAESGG+LV++++ K AII+YRGKNY R
Sbjct: 650 MHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQR 709
Query: 755 PLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
P LRP++LL ++ AL RSVE QR + LK H+L+L + I+ +K ++
Sbjct: 710 PSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 755
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
E +P EL+RL+ +R+ R KVG AG+T+ +V+ IHE+W+ E+VK++ ++ ++ M
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 307 KRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTN 359
KRTHEILER+TGGLVIWRSGS+++L+RG YK P Q N ++ + T+
Sbjct: 198 KRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFQDREMKNDMDESSEHTS 250
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 652 AELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIV 709
++LPS ++N ER +LRK L MK P L +GR + G + + H+K L + +
Sbjct: 908 SQLPSAAAPLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNI 967
Query: 710 KGKSFAQ-VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
K ++ ++Q+ LE +G VLVS + +I+YRG
Sbjct: 968 KNRADGTPIQQLISELEEATGSVLVSREPN----KVILYRG 1004
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 669 LRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAES 728
L+ G+ ++ L +G+ G+ +G + +H W+ ELVKI S +K+ LE ++
Sbjct: 149 LQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKT 208
Query: 729 GGVLVSLDKTPKGIAIIVYRGKNYVRP 755
GG+++ G II+YRG +Y P
Sbjct: 209 GGLVI----WRSGSTIILYRGTDYKYP 231
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 459 LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGG 518
L K P A+GRN + G+AKA+ ++K +A + IK T +++ EL++ TG
Sbjct: 930 LKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGS 989
Query: 519 TLLCRNKDYIVFYRG 533
L+ R + ++ YRG
Sbjct: 990 VLVSREPNKVILYRG 1004
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 248 KMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMK 307
++I E E LR + L+M +G G+ V+++H WK E+VK+ +E + ++
Sbjct: 614 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 673
Query: 308 RTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPCV 342
LE +GG+++ +++++RG Y+ P
Sbjct: 674 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST 712
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 469 LGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYI 528
+G+ +G+ + + W + + KI DV +R E L++ TGG ++ R+ I
Sbjct: 162 VGKAGVTEGIVNGIHERWRNAELVKIRCD-DVSAMNMKRTHEILERKTGGLVIWRSGSTI 220
Query: 529 VFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVAS 567
+ YRG D+ P D +++ D +E + H +S
Sbjct: 221 ILYRGTDYKYPYFQD--------REMKNDMDESSEHTSS 251
>gi|326497411|dbj|BAK05795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1070
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 192/411 (46%), Positives = 265/411 (64%), Gaps = 31/411 (7%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF +W G +PLPVDADLLP +VP ++ P RLLP G+ P L D E T R
Sbjct: 402 EDDKLLDGLGPRFSEWWGYDPLPVDADLLPAIVPGFRRPFRLLPSGVPPKLTDREMTILR 461
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLAR P H+ALGR+ LQGLA +++KLWE+ +AKIA+KR +E ++EELK LTG
Sbjct: 462 RLARPLPYHYALGRSSNLQGLAASIIKLWERCEVAKIAMKRGPYCIDSELVSEELKGLTG 521
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
GTLL R+ + IV YRG DFLP V+ A+ E+R +H S + + K +
Sbjct: 522 GTLLSRDNESIVLYRGKDFLPQAVSLAI-------------EKRRKHDNSMINKPKPE-- 566
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRH-----ASLLRYLEQKLALAK 632
+ ++ A+ + S E ++++S + ++ + +E +L+ A
Sbjct: 567 ----IEESIPTQDASELKIANDASVHGHECHEGETSVSEYRTESLNTVAQNMETRLSQAL 622
Query: 633 RKLKMADKALAKVQESLDPAELPSDLET---ITNEERFLLRKMGLSMKPYLLLGRRGIYD 689
+ + A+K L E L+ A S ET I+ EER++LRK+GL MKP+LLLGRRG++D
Sbjct: 623 TEKEKAEKLL----EELEKASRSSKAETREVISEEERYMLRKVGLQMKPFLLLGRRGVFD 678
Query: 690 GTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
GTIENMHLHWKYRELVKII K S V A +LEAESGG+LV++++ KG AII+YRG
Sbjct: 679 GTIENMHLHWKYRELVKIICKEHSMEDVTYAARTLEAESGGILVAVERVSKGHAIIMYRG 738
Query: 750 KNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
KNY RP LRP++LL ++ AL RSVELQRR+ LK H+L+L + I+ ++ +L
Sbjct: 739 KNYQRPSSLRPKSLLNKKDALKRSVELQRRKSLKLHVLNLSKNIDYLRGQL 789
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 7/110 (6%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
E +P EL+RL+ + +R+ +R KVG G+T+ +V+ IHE+W+ E+VK++ ++ ++ M
Sbjct: 139 ELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNAELVKIRCDDISAMNM 198
Query: 307 KRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQD 356
+RTHE+LER+TGGLVIWRSGS+++L+RG YK P + H QQ D
Sbjct: 199 RRTHEVLERKTGGLVIWRSGSTIILYRGTNYKYP-------YFHDQQKMD 241
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 654 LPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKG 711
LPS ++N ER +LRK L MK P L +GR + G + + H+K L + +K
Sbjct: 933 LPSKAAPLSNRERLVLRKQALQMKKRPVLAIGRNNVITGVAKTIRTHFKKHPLAVVNIKN 992
Query: 712 KSFAQ-VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
++ V+Q+ LE +G VLVS + +I+YRG
Sbjct: 993 RADGTPVQQLISELEEATGSVLVSREPN----KVILYRG 1027
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 660 TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQ 719
T+ +E L+ +G+ ++ L +G+ G+ +G + +H W+ ELVKI S +++
Sbjct: 141 TLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNAELVKIRCDDISAMNMRR 200
Query: 720 IAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
LE ++GG+++ G II+YRG NY P
Sbjct: 201 THEVLERKTGGLVIWRS----GSTIILYRGTNYKYP 232
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 236 DRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVK 295
++ RS+ ++I E E LR + L+M +G G+ ++++H WK E+VK
Sbjct: 636 EKASRSSKAETREVISEEERYMLRKVGLQMKPFLLLGRRGVFDGTIENMHLHWKYRELVK 695
Query: 296 LKFEEPHSLQ-MKRTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLP 340
+ +E HS++ + LE +GG+++ G +++++RG Y+ P
Sbjct: 696 IICKE-HSMEDVTYAARTLEAESGGILVAVERVSKGHAIIMYRGKNYQRP 744
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 459 LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGG 518
L K P A+GRN + G+AK + ++K +A + IK T +++ EL++ TG
Sbjct: 953 LQMKKRPVLAIGRNNVITGVAKTIRTHFKKHPLAVVNIKNRADGTPVQQLISELEEATGS 1012
Query: 519 TLLCRNKDYIVFYRG 533
L+ R + ++ YRG
Sbjct: 1013 VLVSREPNKVILYRG 1027
>gi|297807647|ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
gi|297317544|gb|EFH47966.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 232/619 (37%), Positives = 320/619 (51%), Gaps = 87/619 (14%)
Query: 229 LPWKRNTDR--RRRSNTE----LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVD 282
+PW R +R RR E AE ++ E L RLR + +M + V AG+T+ +V+
Sbjct: 149 MPWDREEERFIMRRMKKERVPTTAELILDEGLLNRLRREASKMRKWVNVRKAGVTETVVN 208
Query: 283 SIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCV 342
I WKL E+ ++F+ P M+R EI+E +TGGLV+ +V++RG P
Sbjct: 209 EIRLIWKLKELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLVVYRGG----PSY 264
Query: 343 QSFTKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYL 402
S ++T+ +E+ ++ E E + L
Sbjct: 265 SS-------EETRSGQDEISSSLYER-----------------------------EADRL 288
Query: 403 LDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARK 462
LD LGPR+ DW R P PVDADLLP VV Y+ P R P + L D E T R +A+
Sbjct: 289 LDGLGPRYLDWWMRRPFPVDADLLPQVVNGYRTPSRRCPPNTRAKLSDEELTYLRNIAQA 348
Query: 463 TPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLC 522
P HF LGRN LQGLA A+VKLWEK IAKIAIK +NT NE MA+ELK LTGG L+
Sbjct: 349 LPFHFVLGRNHGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELKHLTGGVLIL 408
Query: 523 RNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKG--FVGS 580
RNK I+ YRG DFL VTD V +R +L Q EE R ++E+ G +
Sbjct: 409 RNKYLIILYRGKDFLSDEVTDLVDDRERLLRGYQHFEETKREGDIEILEVVTDGKQLKET 468
Query: 581 LVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADK 640
+GTL E ++G + + ++ +R L+ E KL++ K K++ +
Sbjct: 469 SKSGTLLEFQELQRKFGEM----ETRNLETEAEKARLEKELKSQEHKLSILKSKIEKSTM 524
Query: 641 ALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMK------------------PYLL- 681
L K+ P+E D+E TNEER LR++GL M PY L
Sbjct: 525 ELFKLNSLWKPSERDDDIEIFTNEERECLRRIGLKMSSSLVLGRSNRIHSCLLLIPYPLA 584
Query: 682 ---------------LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEA 726
LGRRG++ G +E +H HWK+RE+ K+I K F++V A SLEA
Sbjct: 585 MRLIYINFIFVFVSFLGRRGVFVGIMEGLHQHWKHREVAKVITMQKIFSRVVYTAKSLEA 644
Query: 727 ESGGVLVSLDKTPKGIAIIVYRGKNYVRP-LKLRPQNLLTRRQALARSVELQRREGLKHH 785
ES GVL+S++K +G AI++YRGKNY RP KL QNLLT+R+AL RSV +QR LK
Sbjct: 645 ESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVAMQRLGSLKFF 704
Query: 786 ILDLQERIELVKSELEEIE 804
+ IE +K L +++
Sbjct: 705 AYQRERVIEDLKLSLVDLQ 723
>gi|154986387|gb|ABS89147.1| CFM2 alternative polyadenylation form 2 [Zea mays]
Length = 783
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/390 (49%), Positives = 255/390 (65%), Gaps = 36/390 (9%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF W G +P+PVDADLLP +VP Y+ P RLLP G+ P L D E T R
Sbjct: 376 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 435
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLA P H+ALGR+ LQGLA +M+KLWE+ +AKIA+KRD NT +E + EE+K+LTG
Sbjct: 436 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 495
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
GTLL R+K+ IVFYRG DFLPP V+ A+++R KL S+ I KAK
Sbjct: 496 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKL--------------GSSTI-YKAKPG 540
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDS----TLSRHASL---LRYLEQKLAL 630
+ + L +S DV +R+ T +R SL + +E +L+
Sbjct: 541 IEESMPTQNDSVLKVSS---------DVSVHVREEGTSVTENRAGSLNTVAKDVETRLSQ 591
Query: 631 AKRKLKMADKALAKVQES--LDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
A + A+K + +++++ L AE+ ETI+ +ER++LRK+GL MK +LLLGRRG++
Sbjct: 592 AIAEKAKAEKLIEELEKASPLSKAEV---RETISEDERYMLRKVGLKMKQFLLLGRRGVF 648
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
DGTIENMHLHWKYRELVKII K V+ A +LEAESGG+LV+++K KG AIIVYR
Sbjct: 649 DGTIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYR 708
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQR 778
GKNY RP KLRP+ LL++R AL RS+E QR
Sbjct: 709 GKNYKRPSKLRPKTLLSKRDALKRSLENQR 738
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 80/116 (68%), Gaps = 6/116 (5%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQ 305
AE +P EL+RL+ I +R+ +R KVG AGIT+ +V+ IHE+W+ EVVKL+ E+ ++
Sbjct: 132 AELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMN 191
Query: 306 MKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC------VQSFTKHNHTQQTQ 355
M+RTHEILER+TGGLVIWRSGS+++L+RG Y P V SF + Q+
Sbjct: 192 MRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESSDQSN 247
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 648 SLDPAELPSDLE-TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVK 706
S P+ PS E + +E L+ +G+ ++ L +G+ GI +G + +H W+ E+VK
Sbjct: 122 SGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVK 181
Query: 707 IIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
+ + +++ LE ++GG+++ G II+YRG NY P
Sbjct: 182 LRCEDVWAMNMRRTHEILERKTGGLVIWRS----GSTIILYRGTNYTYP 226
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 250 IPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRT 309
I E E LR + L+M + +G G+ ++++H WK E+VK+ +E ++
Sbjct: 621 ISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVEYA 680
Query: 310 HEILERRTGGLVIW----RSGSSVVLFRGMAYKLP 340
LE +GG+++ G +++++RG YK P
Sbjct: 681 ARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRP 715
>gi|357454755|ref|XP_003597658.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355486706|gb|AES67909.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 880
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 212/512 (41%), Positives = 287/512 (56%), Gaps = 66/512 (12%)
Query: 316 RTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN------VGE-- 367
+TGGLV+W ++V++RG YKL S TK + TN N +G+
Sbjct: 299 KTGGLVVWSKKDALVVYRGCNYKLTSKGS-TKIDTGYIPSRKTNSYEMNGVKLATIGDLY 357
Query: 368 --HPPRSAME--SYVPDSANNLENLSKEELMDLCELNY--------------LLDELGPR 409
RS E S+ D ++L D+ ++NY LLD LGPR
Sbjct: 358 RAESDRSTSELPSWNADHKHSLST-------DIHDMNYQPANGSLYERECDRLLDGLGPR 410
Query: 410 FKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFAL 469
F DW +PLPVDADLLP VVP ++PPLR+ P L D E T FRR++ P HF L
Sbjct: 411 FIDWWMHKPLPVDADLLPEVVPGFEPPLRICPPHASAKLTDGELTYFRRISHPLPTHFVL 470
Query: 470 GRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIV 529
GRNR LQGLA A++KLW KS IAKIAIK V NT NE MA ELK+LTGG LL RNK YI+
Sbjct: 471 GRNRGLQGLAAAILKLWHKSHIAKIAIKYGVQNTDNETMANELKRLTGGVLLLRNKFYIL 530
Query: 530 FYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVA----SALIELKAKGFVGSLVAGT 585
YRG DFLP V D V+ R Q +EE AR A S++ E G+ +GT
Sbjct: 531 LYRGKDFLPRRVADLVERRELELKSCQLDEEVARMKAIQAFSSIDEFPLPQ--GTSTSGT 588
Query: 586 LAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKA---- 641
L E Q ++++++ D ++ A + R LE++L +RK + +K
Sbjct: 589 LTEFRNI------QNKLDEMKEVNVDLSIPLEAEIYR-LEKELKEQQRKAFILNKKIERS 641
Query: 642 ---LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLL------------GRRG 686
L+K+ + P+ DLE +T+EER RKMGL M+ L+L GRRG
Sbjct: 642 TMELSKLNAAWKPSGEDIDLEIMTDEERECFRKMGLKMRSCLVLGKAISLHSTTSAGRRG 701
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
++DG +E +H HWK+RE+ K+I + ++V + LE ESGG+LVS+D+ +G AII+
Sbjct: 702 VFDGVLEGLHQHWKHREVAKVITMQRLISRVIYTSQFLERESGGILVSVDQLKEGYAIII 761
Query: 747 YRGKNYVRPLKLRPQNLLTRRQALARSVELQR 778
YRGKNY RP + +NLLT+R+AL RS+E+QR
Sbjct: 762 YRGKNYSRPSEKIAKNLLTKRKALRRSLEMQR 793
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 255 LQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILE 314
LQRLR+ + M KV AG+TQ +V+ I W+ +E+ +KF+ P M R EI+E
Sbjct: 171 LQRLRSEAAIMRIWVKVKKAGVTQDVVNQIKRTWRTNELAMVKFDIPLCQNMDRAREIVE 230
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 269 TKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVI----WR 324
T G G+ +++ +H+ WK EV K+ + ++ T + LER +GG+++ +
Sbjct: 695 TSAGRRGVFDGVLEGLHQHWKHREVAKVITMQRLISRVIYTSQFLERESGGILVSVDQLK 754
Query: 325 SGSSVVLFRGMAYKLP 340
G +++++RG Y P
Sbjct: 755 EGYAIIIYRGKNYSRP 770
>gi|168014862|ref|XP_001759970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688720|gb|EDQ75095.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 512
Score = 308 bits (789), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 197/502 (39%), Positives = 276/502 (54%), Gaps = 36/502 (7%)
Query: 312 ILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRNVGEHPPR 371
+L+R TGG+VIWR G +VV++RG Y +P K + ++ +++ E R
Sbjct: 1 LLQRLTGGIVIWREGPAVVIYRGKDY-VPV--WMRKMDLREEAYRKRLQLLDCDEEDESR 57
Query: 372 SAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVP 431
ME S + N+ +E E+ L+D+LGP+F W PVD DLL V
Sbjct: 58 QLMEE--GTSYDCQTNMIQES-----EIEDLMDDLGPQFVGWIEGGRAPVDGDLL--VNS 108
Query: 432 DYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAI 491
++ P R LPYG++P L + E TE R LA+K PPHF LG+ R L+GLA A+VKLWEKS +
Sbjct: 109 NFNSPFRRLPYGVRPRLTNFEMTEMRHLAKKLPPHFVLGQCRGLEGLASAIVKLWEKSEV 168
Query: 492 AKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKL 551
AKIA+KR V N+RMA EL +LTGG L+ RN YI YRGN FLP +V +KE+ +
Sbjct: 169 AKIAMKRGVSRIVNDRMASELIRLTGGDLIARNMSYIALYRGNSFLPAIVKGTLKEKDHI 228
Query: 552 TDIRQDEEERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRD 611
++EER R +A+ L A+ + L + + + S +
Sbjct: 229 ARTLLEDEERNR-LAAILARKAARDLARQRMQRILNSVSSFSYNFCIHRSSLKFGLFLLS 287
Query: 612 STLSRHASLL------RY--LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITN 663
S + ++ + R+ + L + +K+ A++ L + + P ++ + E +T
Sbjct: 288 SIFMKISAYMVIDIEIRFKPIRIGLNVVSQKISSAERELLNLNLKMKPKDMHASKEDVTE 347
Query: 664 EERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFA-----QVK 718
EE + LRK+GL MKPYLLLGRR ++ G IENMHLHWK+R+LVKIIVK F ++
Sbjct: 348 EEMYTLRKIGLRMKPYLLLGRREVFSGVIENMHLHWKWRQLVKIIVKKSYFMYRERDDIE 407
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLK----------LRPQNLLTRRQ 768
IA LE ESGGVLV + P G AIIVYRGKNY RP LRP LLT++Q
Sbjct: 408 NIARMLEIESGGVLVGICTIPVGEAIIVYRGKNYQRPNDGISPQGHPDGLRPCGLLTKKQ 467
Query: 769 ALARSVELQRREGLKHHILDLQ 790
A R + +R+ LDL
Sbjct: 468 AWERFNQKRRKRVYFSLSLDLN 489
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 250 IPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKR- 308
+ E E+ LR I LRM +G + +++++H WK ++VK+ ++ + + +R
Sbjct: 345 VTEEEMYTLRKIGLRMKPYLLLGRREVFSGVIENMHLHWKWRQLVKIIVKKSYFMYRERD 404
Query: 309 ----THEILERRTGGLVIWRS----GSSVVLFRGMAYKLP 340
+LE +GG+++ G +++++RG Y+ P
Sbjct: 405 DIENIARMLEIESGGVLVGICTIPVGEAIIVYRGKNYQRP 444
>gi|218194999|gb|EEC77426.1| hypothetical protein OsI_16218 [Oryza sativa Indica Group]
Length = 818
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 236/406 (58%), Gaps = 54/406 (13%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF DW G +PLPVDADLLP +VP Y+
Sbjct: 171 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------------- 207
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
R+ LQGLA +M+KLWE+ +AK+AIKR N ++ ++E+LK LTG
Sbjct: 208 -------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 254
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
GTLL R+ + IVFYRG DFLP V+ A+++R R ++ I F
Sbjct: 255 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKR--------------RKYGNSTISNPKLNF 300
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY---LEQKLALAKRK 634
S + +A YE K + +R SL + +E +L+ A +
Sbjct: 301 DKSTPQNSSKLKMATDVSLDGHECYEKKHKDETAVSDNRAESLNVFTQNVEARLSQAIAE 360
Query: 635 LKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIEN 694
+ +K + +++ S +P+ + E I+ EER++LRK+GL MK +LLLGRRG++DGT+EN
Sbjct: 361 KEKTEKLIEELEMSSEPSRAETR-EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVEN 419
Query: 695 MHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVR 754
MHLHWKYRELVKII K + V+ A +LEAESGG+LV++++ K AII+YRGKNY R
Sbjct: 420 MHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQR 479
Query: 755 PLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
P LRP++LL ++ AL RSVE QR + LK H+L+L + I+ +K ++
Sbjct: 480 PSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 525
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 304 LQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLP 340
+ MKRTHEILER+TGGLVIWRSGS+++L+RG YK P
Sbjct: 1 MNMKRTHEILERKTGGLVIWRSGSTIILYRGTDYKYP 37
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 652 AELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIV 709
++LPS ++N ER +LRK L MK P L +GR + G + + H+K L + +
Sbjct: 678 SQLPSAAAPLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNI 737
Query: 710 KGKSFAQ-VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
K ++ ++Q+ LE +G VLVS + P +I+YRG
Sbjct: 738 KNRADGTPIQQLISELEEATGSVLVS--REPN--KVILYRG 774
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 459 LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGG 518
L K P A+GRN + G+AKA+ ++K +A + IK T +++ EL++ TG
Sbjct: 700 LKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGS 759
Query: 519 TLLCRNKDYIVFYRG 533
L+ R + ++ YRG
Sbjct: 760 VLVSREPNKVILYRG 774
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 248 KMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMK 307
++I E E LR + L+M +G G+ V+++H WK E+VK+ +E + ++
Sbjct: 384 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 443
Query: 308 RTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPCV 342
LE +GG+++ +++++RG Y+ P
Sbjct: 444 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST 482
>gi|125590660|gb|EAZ31010.1| hypothetical protein OsJ_15093 [Oryza sativa Japonica Group]
Length = 818
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 236/406 (58%), Gaps = 54/406 (13%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF DW G +PLPVDADLLP +VP Y+
Sbjct: 171 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------------- 207
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
R+ LQGLA +M+KLWE+ +AK+AIKR N ++ ++E+LK LTG
Sbjct: 208 -------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 254
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
GTLL R+ + IVFYRG DFLP V+ A+++R R ++ I F
Sbjct: 255 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKR--------------RKYGNSTISNPKLNF 300
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY---LEQKLALAKRK 634
S + +A YE K + +R SL + +E +L+ A +
Sbjct: 301 DKSTPQNSSKLKMATDVSLDGHECYEKKHKDETAVSDNRAESLNVFAQNVEARLSQAIAE 360
Query: 635 LKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIEN 694
+ +K + +++ S +P+ + E I+ EER++LRK+GL MK +LLLGRRG++DGT+EN
Sbjct: 361 KEKTEKLIEELEMSSEPSRAETR-EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVEN 419
Query: 695 MHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVR 754
MHLHWKYRELVKII K + V+ A +LEAESGG+LV++++ K AII+YRGKNY R
Sbjct: 420 MHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQR 479
Query: 755 PLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
P LRP++LL ++ AL RSVE QR + LK H+L+L + I+ +K ++
Sbjct: 480 PSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 525
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 304 LQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLP 340
+ MKRTHEILER+TGGLVIWRSGS+++L+RG YK P
Sbjct: 1 MNMKRTHEILERKTGGLVIWRSGSTIILYRGTDYKYP 37
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 652 AELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIV 709
++LPS ++N ER +LRK L MK P L +GR + G + + H+K L + +
Sbjct: 678 SQLPSAAAPLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNI 737
Query: 710 KGKSFAQ-VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
K ++ ++Q+ LE +G VLVS + P +I+YRG
Sbjct: 738 KNRADGTPIQQLISELEEATGSVLVS--REPN--KVILYRG 774
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 459 LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGG 518
L K P A+GRN + G+AKA+ ++K +A + IK T +++ EL++ TG
Sbjct: 700 LKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGS 759
Query: 519 TLLCRNKDYIVFYRG 533
L+ R + ++ YRG
Sbjct: 760 VLVSREPNKVILYRG 774
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 248 KMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMK 307
++I E E LR + L+M +G G+ V+++H WK E+VK+ +E + ++
Sbjct: 384 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 443
Query: 308 RTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPCV 342
LE +GG+++ +++++RG Y+ P
Sbjct: 444 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST 482
>gi|21741981|emb|CAD41031.1| OSJNBa0060P14.12 [Oryza sativa Japonica Group]
gi|32492164|emb|CAE04823.1| OSJNBb0048E02.3 [Oryza sativa Japonica Group]
Length = 1012
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 236/406 (58%), Gaps = 54/406 (13%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF DW G +PLPVDADLLP +VP Y+
Sbjct: 365 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------------- 401
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
R+ LQGLA +M+KLWE+ +AK+AIKR N ++ ++E+LK LTG
Sbjct: 402 -------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 448
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
GTLL R+ + IVFYRG DFLP V+ A+++R R ++ I F
Sbjct: 449 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKR--------------RKYGNSTISNPKLNF 494
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY---LEQKLALAKRK 634
S + +A YE K + +R SL + +E +L+ A +
Sbjct: 495 DKSTPQNSSKLKMATDVSLDGHECYEKKHKDETAVSDNRAESLNVFAQNVEARLSQAIAE 554
Query: 635 LKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIEN 694
+ +K + +++ S +P+ + E I+ EER++LRK+GL MK +LLLGRRG++DGT+EN
Sbjct: 555 KEKTEKLIEELEMSSEPSRAETR-EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVEN 613
Query: 695 MHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVR 754
MHLHWKYRELVKII K + V+ A +LEAESGG+LV++++ K AII+YRGKNY R
Sbjct: 614 MHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQR 673
Query: 755 PLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
P LRP++LL ++ AL RSVE QR + LK H+L+L + I+ +K ++
Sbjct: 674 PSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 719
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 78/113 (69%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
E +P EL+RL+ +R+ R KVG AG+T+ +V+ IHE+W+ E+VK++ ++ ++ M
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 307 KRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTN 359
KRTHEILER+TGGLVIWRSGS+++L+RG YK P N ++ + T+
Sbjct: 198 KRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDESSEHTS 250
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 652 AELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIV 709
++LPS ++N ER +LRK L MK P L +GR + G + + H+K L + +
Sbjct: 872 SQLPSAAAPLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNI 931
Query: 710 KGKSFAQ-VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
K ++ ++Q+ LE +G VLVS + P +I+YRG
Sbjct: 932 KNRADGTPIQQLISELEEATGSVLVS--REPN--KVILYRG 968
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 669 LRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAES 728
L+ G+ ++ L +G+ G+ +G + +H W+ ELVKI S +K+ LE ++
Sbjct: 149 LQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKT 208
Query: 729 GGVLVSLDKTPKGIAIIVYRGKNYVRP 755
GG+++ G II+YRG +Y P
Sbjct: 209 GGLVI----WRSGSTIILYRGTDYKYP 231
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 459 LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGG 518
L K P A+GRN + G+AKA+ ++K +A + IK T +++ EL++ TG
Sbjct: 894 LKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGS 953
Query: 519 TLLCRNKDYIVFYRG 533
L+ R + ++ YRG
Sbjct: 954 VLVSREPNKVILYRG 968
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 248 KMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMK 307
++I E E LR + L+M +G G+ V+++H WK E+VK+ +E + ++
Sbjct: 578 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 637
Query: 308 RTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPCV 342
LE +GG+++ +++++RG Y+ P
Sbjct: 638 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST 676
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 469 LGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYI 528
+G+ +G+ + + W + + KI DV +R E L++ TGG ++ R+ I
Sbjct: 162 VGKAGVTEGIVNGIHERWRNAELVKIRCD-DVSAMNMKRTHEILERKTGGLVIWRSGSTI 220
Query: 529 VFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVAS 567
+ YRG D+ P D +++ D +E + H +S
Sbjct: 221 ILYRGTDYKYPYFHD--------REMKNDMDESSEHTSS 251
>gi|297602873|ref|NP_001053020.2| Os04g0464800 [Oryza sativa Japonica Group]
gi|255675534|dbj|BAF14934.2| Os04g0464800 [Oryza sativa Japonica Group]
Length = 1042
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 236/406 (58%), Gaps = 54/406 (13%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF DW G +PLPVDADLLP +VP Y+
Sbjct: 365 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------------- 401
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
R+ LQGLA +M+KLWE+ +AK+AIKR N ++ ++E+LK LTG
Sbjct: 402 -------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 448
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
GTLL R+ + IVFYRG DFLP V+ A+++R R ++ I F
Sbjct: 449 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKR--------------RKYGNSTISNPKLNF 494
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY---LEQKLALAKRK 634
S + +A YE K + +R SL + +E +L+ A +
Sbjct: 495 DKSTPQNSSKLKMATDVSLDGHECYEKKHKDETAVSDNRAESLNVFAQNVEARLSQAIAE 554
Query: 635 LKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIEN 694
+ +K + +++ S +P+ + E I+ EER++LRK+GL MK +LLLGRRG++DGT+EN
Sbjct: 555 KEKTEKLIEELEMSSEPSRAETR-EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVEN 613
Query: 695 MHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVR 754
MHLHWKYRELVKII K + V+ A +LEAESGG+LV++++ K AII+YRGKNY R
Sbjct: 614 MHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQR 673
Query: 755 PLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
P LRP++LL ++ AL RSVE QR + LK H+L+L + I+ +K ++
Sbjct: 674 PSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 719
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 78/113 (69%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
E +P EL+RL+ +R+ R KVG AG+T+ +V+ IHE+W+ E+VK++ ++ ++ M
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 307 KRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTN 359
KRTHEILER+TGGLVIWRSGS+++L+RG YK P N ++ + T+
Sbjct: 198 KRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDESSEHTS 250
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 652 AELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIV 709
++LPS ++N ER +LRK L MK P L +GR + G + + H+K L + +
Sbjct: 872 SQLPSAAAPLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNI 931
Query: 710 KGKSFAQ-VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
K ++ ++Q+ LE +G VLVS + +I+YRG
Sbjct: 932 KNRADGTPIQQLISELEEATGSVLVSREPN----KVILYRG 968
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 669 LRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAES 728
L+ G+ ++ L +G+ G+ +G + +H W+ ELVKI S +K+ LE ++
Sbjct: 149 LQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKT 208
Query: 729 GGVLVSLDKTPKGIAIIVYRGKNYVRP 755
GG+++ G II+YRG +Y P
Sbjct: 209 GGLVI----WRSGSTIILYRGTDYKYP 231
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 459 LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGG 518
L K P A+GRN + G+AKA+ ++K +A + IK T +++ EL++ TG
Sbjct: 894 LKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGS 953
Query: 519 TLLCRNKDYIVFYRG 533
L+ R + ++ YRG
Sbjct: 954 VLVSREPNKVILYRG 968
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 248 KMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMK 307
++I E E LR + L+M +G G+ V+++H WK E+VK+ +E + ++
Sbjct: 578 EVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVE 637
Query: 308 RTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPCV 342
LE +GG+++ +++++RG Y+ P
Sbjct: 638 YAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPST 676
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 469 LGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYI 528
+G+ +G+ + + W + + KI DV +R E L++ TGG ++ R+ I
Sbjct: 162 VGKAGVTEGIVNGIHERWRNAELVKIRCD-DVSAMNMKRTHEILERKTGGLVIWRSGSTI 220
Query: 529 VFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVAS 567
+ YRG D+ P D +++ D +E + H +S
Sbjct: 221 ILYRGTDYKYPYFHD--------REMKNDMDESSEHTSS 251
>gi|147852955|emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
Length = 1399
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 305/593 (51%), Gaps = 93/593 (15%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
LAE +PE EL+RL+ I +++ ++ KVG AGIT+ +V+ IHE+W+ EVVK++ E+ L
Sbjct: 373 LAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKL 432
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
MKRTH+ILER+TGGLVIWRSGS ++L+RG YK P S + ++ M N
Sbjct: 433 NMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNN 492
Query: 365 VGEHPPRSA-------MESYVPDSANNLENLSKEELMDLC---------------ELNYL 402
EH + ++S P AN + LS + + E + L
Sbjct: 493 E-EHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRL 551
Query: 403 LDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARK 462
LD LGPRF DW G +PLP+DADLLP VVP Y+ P RLLPYG+KP L + E T RRL R
Sbjct: 552 LDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRP 611
Query: 463 TPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLL- 521
P HFALGRNR+LQGLA +M+KLWEK IAKIA+KR V NT +E MAEELK +G ++
Sbjct: 612 LPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELK--SGSSIFG 669
Query: 522 -CRNKDY---IVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGF 577
C+N + IV + G E ++ + E V++ + + G+
Sbjct: 670 NCKNVGWYGSIVRFGGQLLFAYFGCHFGFENQ--INLDKSELILIGRVSNVMELVAIFGY 727
Query: 578 -VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLK 636
VG+L + L +L AT W ++ VE+ R ++LA+ KR K
Sbjct: 728 KVGALPSTYLGLSLGATHNW--VVVWDRVEERFR---------------KRLAMWKRS-K 769
Query: 637 MADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMH 696
A A V S+ PS N+ F +M+ +LL GI D +
Sbjct: 770 KAWVADLWVHSSIGGEWNPS-FSRPLNDWEF------ETMECFLL----GIQDKVV---- 814
Query: 697 LHWKYRELVKIIVKGKSFAQVKQIAISLEAE--SGGVLVSLDKTPKGIAIIVYRGKNYVR 754
+ + ++ ++ K SF+ ++I E +GG L+S D+ I+ YRGK+++
Sbjct: 815 VDEREDDVFWVVRKSGSFSVKSFLSILEEVRNLTGGTLLSRDRE----FIVFYRGKDFLP 870
Query: 755 PLKLRPQNLLTRRQALARSVELQRREG-------LKHHILDLQ-ERIELVKSE 799
P A++ ++E +R+ G + HH L + E EL SE
Sbjct: 871 P-------------AVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSE 910
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 177/280 (63%), Gaps = 26/280 (9%)
Query: 508 MAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVAS 567
+ EE++ LTGGTLL R++++IVFYRG DFLPP V+ A++ R K I + +++ H
Sbjct: 840 ILEEVRNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKY-GIHRGKQKIDHH--- 895
Query: 568 ALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQ- 626
+A E+ TS + + +S R +LR E
Sbjct: 896 -------------RLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRR--MLRSAEAV 940
Query: 627 ------KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYL 680
KL++A K + A+K LA+++E+ P + D E IT EER++LRK+GL MKP+L
Sbjct: 941 VERTSIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFL 1000
Query: 681 LLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPK 740
LLGRRGI+DGT+ENMHLHWKYRELVKII G+S + +A +LEAESGG+LV++++ K
Sbjct: 1001 LLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSK 1060
Query: 741 GIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRRE 780
G AII+YRGKNY RP LRPQ LL +R+A+ RS+E QRRE
Sbjct: 1061 GYAIIMYRGKNYKRPASLRPQTLLNKREAMKRSLEAQRRE 1100
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 653 ELPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVK 710
E+P ++N ER LLRK L MK P + +GR I G + + H++ L + VK
Sbjct: 1246 EMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVK 1305
Query: 711 GKS-FAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
G++ V+++ LE +G VLVS + + +I+YRG
Sbjct: 1306 GRAKGTSVQEVVFKLEQATGAVLVSQEPS----KVILYRG 1341
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 244 ELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHS 303
E+ ++ I E E LR + LRM +G GI V+++H WK E+VK+
Sbjct: 975 EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSI 1034
Query: 304 LQMKRTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPC 341
+ LE +GG+++ G +++++RG YK P
Sbjct: 1035 EDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPA 1076
>gi|326492864|dbj|BAJ90288.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 630
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 247/477 (51%), Gaps = 64/477 (13%)
Query: 246 AEKMIPEHELQRLRNISLRMLER-TKVGSAGITQALVDSIHEKWKL-DEVVKLKFEEPHS 303
AE+++ EL RLR + + + AG+T +V+ + W E+ ++ EP
Sbjct: 150 AERLLDPAELDRLRRAARGTGDGWLRAKKAGVTDEVVEDVCRVWSGGQELAAVRVVEPLR 209
Query: 304 LQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY---------------KLP---CVQSF 345
M R EILE ++GGLV+W G ++RG +Y ++P C
Sbjct: 210 RCMDRAREILEIKSGGLVVWTKGDVHFVYRGSSYLENIKHRQKSIADIQRVPLEKCTAPG 269
Query: 346 TKHNHTQQTQDVTNE------VMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCEL 399
+ H + TN V R + P A+ +Y L E+
Sbjct: 270 PQWKHESNAEPSTNHNDDAHGVFRGID---PSLAVHAYEEPVEGTLYER---------EV 317
Query: 400 NYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRL 459
N LLD LGPRF DW PLPVDADLLP VVP +K P R P G++P L D E T R+L
Sbjct: 318 NRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEELTYLRKL 377
Query: 460 ARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGT 519
AR P HFALGRN LQGLA A++KLWEKS IAKIA+K + NT NE+MA LK LTGGT
Sbjct: 378 ARPLPTHFALGRNTRLQGLAAAVLKLWEKSLIAKIAVKVGIQNTNNEQMAWNLKHLTGGT 437
Query: 520 LLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAKGFVG 579
++ RNKD+++ YRG DFLP V +V E+ +Q +EE AR + + LK
Sbjct: 438 IILRNKDFVILYRGKDFLPGGVKQSVIEQEARVYAQQVKEEEARLM--VMDSLK------ 489
Query: 580 SLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASL-------------LRYLEQ 626
+ AG +E + S G Y+D + T + +L L+ E+
Sbjct: 490 -MFAGLPSEESSVGSFRG----YQDFQLNHVQETTENNMALIELEAEKHRLEKELKDQER 544
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
+L + +K++ +++ALAK+ S +P+E +D E +T EER + RK+GL M ++LLG
Sbjct: 545 RLFILTKKIERSNEALAKLHNSWNPSEQSADKELLTEEERMIFRKIGLKMDEHVLLG 601
>gi|154986385|gb|ABS89146.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 668
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 174/298 (58%), Gaps = 42/298 (14%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF W G +P+PVDADLLP +VP Y+ P RLLP G+ P L D E T R
Sbjct: 370 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 429
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLA P H+ALGR+ LQGLA +M+KLWE+ +AKIA+KRD NT +E + EE+K+LTG
Sbjct: 430 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 489
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTD-----IRQDEEERARHVASALIEL 572
GTLL R+K+ IVFYRG DFLPP V+ A+++R KL + EE +++++
Sbjct: 490 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKAKPGIEESMPTQNDSVLKV 549
Query: 573 KAKGFV-----GSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHAS--LLRYLE 625
+ V G+ V AE+L ++ DVE + + + + L+ LE
Sbjct: 550 SSDVSVHVREEGTSVTENRAESLNTVAK--------DVETRLSQAIAEKAKAEKLIEELE 601
Query: 626 QKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
+ L+K +++ ETI+ +ER++LRK+GL MK +LLLG
Sbjct: 602 KASPLSKAEVR----------------------ETISEDERYMLRKVGLKMKQFLLLG 637
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 80/116 (68%), Gaps = 6/116 (5%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQ 305
AE +P EL+RL+ I +R+ +R KVG AGIT+ +V+ IHE+W+ EVVKL+ E+ ++
Sbjct: 126 AELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMN 185
Query: 306 MKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC------VQSFTKHNHTQQTQ 355
M+RTHEILER+TGGLVIWRSGS+++L+RG Y P V SF + Q+
Sbjct: 186 MRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESSDQSN 241
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 648 SLDPAELPSDLE-TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVK 706
S P+ PS E + +E L+ +G+ ++ L +G+ GI +G + +H W+ E+VK
Sbjct: 116 SGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVK 175
Query: 707 IIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
+ + +++ LE ++GG+++ G II+YRG NY P
Sbjct: 176 LRCEDVWAMNMRRTHEILERKTGGLVIWR----SGSTIILYRGTNYTYP 220
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 654 LPSDLET-ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGK 712
LPS + +T+ E +LR++ ++ + LGR G +M W+ E+ KI +K
Sbjct: 412 LPSGVPPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRD 471
Query: 713 SFAQVKQ-IAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
+ + I ++ +GG L+S DK +I+ YRGK+++ P
Sbjct: 472 AHNTDSELITEEVKELTGGTLLSRDKE----SIVFYRGKDFLPP 511
>gi|413918578|gb|AFW58510.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 681
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 174/298 (58%), Gaps = 42/298 (14%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E + LLD LGPRF W G +P+PVDADLLP +VP Y+ P RLLP G+ P L D E T R
Sbjct: 383 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 442
Query: 458 RLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTG 517
RLA P H+ALGR+ LQGLA +M+KLWE+ +AKIA+KRD NT +E + EE+K+LTG
Sbjct: 443 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 502
Query: 518 GTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTD-----IRQDEEERARHVASALIEL 572
GTLL R+K+ IVFYRG DFLPP V+ A+++R KL + EE +++++
Sbjct: 503 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKAKPGIEESMPTQNDSVLKV 562
Query: 573 KAKGFV-----GSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHAS--LLRYLE 625
+ V G+ V AE+L ++ DVE + + + + L+ LE
Sbjct: 563 SSDVSVHVREEGTSVTENRAESLNTVAK--------DVETRLSQAIAEKAKAEKLIEELE 614
Query: 626 QKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
+ L+K +++ ETI+ +ER++LRK+GL MK +LLLG
Sbjct: 615 KASPLSKAEVR----------------------ETISEDERYMLRKVGLKMKQFLLLG 650
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 80/116 (68%), Gaps = 6/116 (5%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQ 305
AE +P EL+RL+ I +R+ +R KVG AGIT+ +V+ IHE+W+ EVVKL+ E+ ++
Sbjct: 139 AELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMN 198
Query: 306 MKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPC------VQSFTKHNHTQQTQ 355
M+RTHEILER+TGGLVIWRSGS+++L+RG Y P V SF + Q+
Sbjct: 199 MRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESSDQSN 254
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 648 SLDPAELPSDLE-TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVK 706
S P+ PS E + +E L+ +G+ ++ L +G+ GI +G + +H W+ E+VK
Sbjct: 129 SGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVK 188
Query: 707 IIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
+ + +++ LE ++GG+++ G II+YRG NY P
Sbjct: 189 LRCEDVWAMNMRRTHEILERKTGGLVIWR----SGSTIILYRGTNYTYP 233
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 654 LPSDLET-ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGK 712
LPS + +T+ E +LR++ ++ + LGR G +M W+ E+ KI +K
Sbjct: 425 LPSGVPPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRD 484
Query: 713 SF-AQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
+ + I ++ +GG L+S DK +I+ YRGK+++ P
Sbjct: 485 AHNTDSELITEEVKELTGGTLLSRDKE----SIVFYRGKDFLPP 524
>gi|414870651|tpg|DAA49208.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 496
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 153/287 (53%), Gaps = 25/287 (8%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKL-DEVVKLKFEEPHSL 304
AE + HEL RLR ++ + + AG+T +V + +W +E+ ++ EP
Sbjct: 166 AETELETHELHRLRRLARGIGRWARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRR 225
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
M R EILE +TGGLV+W G ++RG Y Q KH+HT T +V +
Sbjct: 226 SMDRAREILEIKTGGLVVWTKGDMHFVYRGSKY-----QQNAKHSHTFLT-NVHKGYLVK 279
Query: 365 VGEHPPRSAMESYVPDSANNL---ENLSKEELMDLC---------------ELNYLLDEL 406
H S P NN ++ +E +C E+N LLD L
Sbjct: 280 HNVHTTLLKYGSIGPVLINNYGEADDAFQENDQSICGQKDEEPVKGTLYEREVNRLLDTL 339
Query: 407 GPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPH 466
GPRF DW PLPVDADLLP VP +K P RL P G++P L D E T R+LAR P H
Sbjct: 340 GPRFVDWWWDTPLPVDADLLPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTH 399
Query: 467 FALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELK 513
FALGRN LQGLA A++KLWEKS IAKIA+K + NT NE+MA LK
Sbjct: 400 FALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMAWNLK 446
>gi|414870653|tpg|DAA49210.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 467
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/269 (43%), Positives = 149/269 (55%), Gaps = 18/269 (6%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKL-DEVVKLKFEEPHSL 304
AE + HEL RLR ++ + + AG+T +V + +W +E+ ++ EP
Sbjct: 166 AETELETHELHRLRRLARGIGRWARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRR 225
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
M R EILE +TGGLV+W G ++RG Y Q KH+HT + N
Sbjct: 226 SMDRAREILEIKTGGLVVWTKGDMHFVYRGSKY-----QQNAKHSHT---------FLTN 271
Query: 365 VGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDAD 424
V H + E+ E K L + E+N LLD LGPRF DW PLPVDAD
Sbjct: 272 V--HKDDAFQENDQSICGQKDEEPVKGTLYER-EVNRLLDTLGPRFVDWWWDTPLPVDAD 328
Query: 425 LLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVK 484
LLP VP +K P RL P G++P L D E T R+LAR P HFALGRN LQGLA A++K
Sbjct: 329 LLPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILK 388
Query: 485 LWEKSAIAKIAIKRDVMNTRNERMAEELK 513
LWEKS IAKIA+K + NT NE+MA LK
Sbjct: 389 LWEKSLIAKIAVKIGIQNTNNEQMAWNLK 417
>gi|9837552|gb|AAG00596.1|AF290415_1 CRS1 [Zea mays]
Length = 267
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 127/223 (56%), Gaps = 17/223 (7%)
Query: 291 DEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNH 350
+E+ ++ EP M R EILE +TGGLV+W G ++RG Y Q KH+H
Sbjct: 12 EELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDMHFVYRGSKY-----QQNAKHSH 66
Query: 351 TQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRF 410
T + NV H + E+ E K L + E+N LLD LGPRF
Sbjct: 67 T---------FLTNV--HKDDAFQENDQSICGQKDEEPVKGTLYER-EVNRLLDTLGPRF 114
Query: 411 KDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALG 470
DW PLPVDADLLP VP +K P RL P G++P L D E T R+LAR P HFALG
Sbjct: 115 VDWWWDTPLPVDADLLPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALG 174
Query: 471 RNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELK 513
RN LQGLA A++KLWEKS IAKIA+K + NT NE+MA LK
Sbjct: 175 RNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMAWNLK 217
>gi|167998334|ref|XP_001751873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696971|gb|EDQ83308.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 590
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
LE++L+L RK K +K LAK+ + A+ P E I++EER++ K+GL M+ LL+G
Sbjct: 110 LEERLSLVARKKKYVEKELAKLDGQMKLADAPPAKEQISDEERYMFMKLGLRMRARLLMG 169
Query: 684 -----RRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKT 738
RRG++DG +ENMHLHWK+RELVK+I KG F + +Q A LE ESGGVLV + T
Sbjct: 170 KLSSGRRGVFDGVVENMHLHWKHRELVKVIFKGPIF-EAEQTAKILEMESGGVLVGIVTT 228
Query: 739 PKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKS 798
KG AII YRGKNY RP +LRP++LL++RQA RS+E+QR+ L+ H+L L++ I ++
Sbjct: 229 TKGQAIIFYRGKNYQRPSELRPRHLLSKRQAYERSLEMQRKRSLEQHMLKLEKEIGKLQV 288
Query: 799 ELEEIEGGKT 808
L E G +
Sbjct: 289 GLYETGEGNS 298
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 138/325 (42%), Gaps = 51/325 (15%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSA-----GITQALVDSIHEKWKLDEVVKLKFEE 300
A++ I + E + LRM R +G G+ +V+++H WK E+VK+ F+
Sbjct: 143 AKEQISDEERYMFMKLGLRMRARLLMGKLSSGRRGVFDGVVENMHLHWKHRELVKVIFKG 202
Query: 301 PHSLQMKRTHEILERRTGGLVIW----RSGSSVVLFRGMAYKLPCV----------QSFT 346
P + ++T +ILE +GG+++ G +++ +RG Y+ P Q++
Sbjct: 203 P-IFEAEQTAKILEMESGGVLVGIVTTTKGQAIIFYRGKNYQRPSELRPRHLLSKRQAYE 261
Query: 347 KHNHTQQTQDVTNEVMR-------------NVGEHPPRSAME-----SYVPDSANNLENL 388
+ Q+ + + +++ GE ME + LE+
Sbjct: 262 RSLEMQRKRSLEQHMLKLEKEIGKLQVGLYETGEGNSGLEMEEKNLLALSEPLGTVLEDF 321
Query: 389 SKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGL 448
EE N L + RF W +P P VV D P + P IK +
Sbjct: 322 DDEEFRSDENYNENLADDIERF-GWKREKPNP------RGVVLD--PIFKAQPLTIKERI 372
Query: 449 RDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERM 508
R + L + P H +G++ + GLAKA+ ++K A + +K +T E +
Sbjct: 373 RLRQEA----LKQSDPMHINIGKSNMVAGLAKAIRLYFQKQPFAIVGVKGRAKDTPVEEI 428
Query: 509 AEELKKLTGGTLLCRNKDYIVFYRG 533
++L++ TG L+ R + ++ YRG
Sbjct: 429 IQQLEEATGAVLVSREPNKLILYRG 453
>gi|326521980|dbj|BAK04118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 120/167 (71%)
Query: 634 KLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIE 693
K+ A K L+K++ S+ A D E IT EER + R++GL MK YL +G RG++DG IE
Sbjct: 20 KIHRAGKLLSKIEASMVLANPSDDREMITAEERSVFRRIGLKMKAYLPVGIRGVFDGVIE 79
Query: 694 NMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYV 753
NMHLHWK+RE+VK+I K K+ A V++ A LE ESGG+LV++++ PKG A+I YRGKNY
Sbjct: 80 NMHLHWKHREVVKLITKQKTLAFVEETARLLEYESGGILVAIERVPKGHALIFYRGKNYR 139
Query: 754 RPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
RP+ +RP+NLLT+ +AL R+V +QR E L HI L+ ++ +K +L
Sbjct: 140 RPINIRPRNLLTKAKALKRAVAMQRHEALSQHIDQLEINMKQMKRDL 186
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 249 MIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKR 308
MI E R I L+M VG G+ +++++H WK EVVKL ++ ++
Sbjct: 46 MITAEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAFVEE 105
Query: 309 THEILERRTGGLVIWR----SGSSVVLFRGMAYKLPC 341
T +LE +GG+++ G +++ +RG Y+ P
Sbjct: 106 TARLLEYESGGILVAIERVPKGHALIFYRGKNYRRPI 142
>gi|297612106|ref|NP_001068192.2| Os11g0592400 [Oryza sativa Japonica Group]
gi|255680227|dbj|BAF28555.2| Os11g0592400, partial [Oryza sativa Japonica Group]
Length = 108
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 92/102 (90%)
Query: 681 LLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPK 740
L GRRG++DGTIENMHLHWKYRELVKI+VK KSF VK+IA+SLEAESGG+LVS+DK K
Sbjct: 6 LSGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSK 65
Query: 741 GIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGL 782
G AI+V+RGK+Y RP KLRP+NLL++R+ALARS+E+QRRE L
Sbjct: 66 GYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREVL 107
>gi|413946392|gb|AFW79041.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 197
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 106/140 (75%)
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQI 720
IT+EE+ + R++GL +K YL LG RG++DG IENMHLHWK+RE+VK+I K K+ + V++
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 721 AISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRRE 780
A L ESGG+LV++++ PKG A+I YRGKNY RP+ +RP+NLLT+ +AL R+V +QR E
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHE 121
Query: 781 GLKHHILDLQERIELVKSEL 800
L HI L+ I+ +K +L
Sbjct: 122 ALSQHIDQLESNIKQMKLDL 141
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 249 MIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKR 308
MI + E R I LR+ +G G+ +++++H WK EVVKL ++ ++
Sbjct: 1 MITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEE 60
Query: 309 THEILERRTGGLVIWRS----GSSVVLFRGMAYKLPC 341
T +L +GG+++ G +++ +RG Y+ P
Sbjct: 61 TARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPI 97
>gi|413946391|gb|AFW79040.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 266
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 106/140 (75%)
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQI 720
IT+EE+ + R++GL +K YL LG RG++DG IENMHLHWK+RE+VK+I K K+ + V++
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 721 AISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRRE 780
A L ESGG+LV++++ PKG A+I YRGKNY RP+ +RP+NLLT+ +AL R+V +QR E
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHE 121
Query: 781 GLKHHILDLQERIELVKSEL 800
L HI L+ I+ +K +L
Sbjct: 122 ALSQHIDQLESNIKQMKLDL 141
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 249 MIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKR 308
MI + E R I LR+ +G G+ +++++H WK EVVKL ++ ++
Sbjct: 1 MITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEE 60
Query: 309 THEILERRTGGLVIWR----SGSSVVLFRGMAYKLP 340
T +L +GG+++ G +++ +RG Y+ P
Sbjct: 61 TARLLAYESGGILVAIERVPKGYALIFYRGKNYRRP 96
>gi|413946390|gb|AFW79039.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 132
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 95/120 (79%)
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQI 720
IT+EE+ + R++GL +K YL LG RG++DG IENMHLHWK+RE+VK+I K K+ + V++
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 721 AISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRRE 780
A L ESGG+LV++++ PKG A+I YRGKNY RP+ +RP+NLLT+ +AL R+V +QR E
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHE 121
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 249 MIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKR 308
MI + E R I LR+ +G G+ +++++H WK EVVKL ++ ++
Sbjct: 1 MITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEE 60
Query: 309 THEILERRTGGLVIWR----SGSSVVLFRGMAYKLP 340
T +L +GG+++ G +++ +RG Y+ P
Sbjct: 61 TARLLAYESGGILVAIERVPKGYALIFYRGKNYRRP 96
>gi|147838476|emb|CAN69859.1| hypothetical protein VITISV_037991 [Vitis vinifera]
Length = 371
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 92/125 (73%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
GRRG++DG IE +H HWK+RE+VK+I +SF+QV A LE+ESGGVLVS+DK +G
Sbjct: 118 FGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEG 177
Query: 742 IAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELE 801
AII+YRGKNY RP+KL P+NLLT+R+AL RS+E+QR LK Q+ I +K +L
Sbjct: 178 HAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLA 237
Query: 802 EIEGG 806
+++ G
Sbjct: 238 DLQKG 242
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVI----WRSG 326
G G+ +++ +H+ WK E+VK+ + Q+ T ++LE +GG+++ + G
Sbjct: 118 FGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEG 177
Query: 327 SSVVLFRGMAYKLP 340
+++++RG Y+ P
Sbjct: 178 HAIIIYRGKNYRRP 191
>gi|212723506|ref|NP_001132081.1| uncharacterized protein LOC100193495 [Zea mays]
gi|194693368|gb|ACF80768.1| unknown [Zea mays]
gi|414586598|tpg|DAA37169.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
gi|414586599|tpg|DAA37170.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 485
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 110/177 (62%), Gaps = 6/177 (3%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL LA++K + AL K+ E DP+E D E +T EE F KMG K Y+ +GRRG
Sbjct: 153 KLKLARKKEERLVVALKKI-EPEDPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRG 211
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + +++IVK + +VK+IAI L SGG+++ + G II+
Sbjct: 212 IYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLDIQ---DGNTIIM 268
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELE 801
YRGKNY +P + P+ L+R++AL +S +++ L+ +I L++ +E + ++++
Sbjct: 269 YRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQMK 325
>gi|238007578|gb|ACR34824.1| unknown [Zea mays]
gi|414586597|tpg|DAA37168.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 342
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 109/176 (61%), Gaps = 6/176 (3%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL LA++K + AL K+ E DP+E D E +T EE F KMG K Y+ +GRRG
Sbjct: 10 KLKLARKKEERLVVALKKI-EPEDPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRG 68
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + +++IVK + +VK+IAI L SGG+++ + G II+
Sbjct: 69 IYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLDIQ---DGNTIIM 125
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
YRGKNY +P + P+ L+R++AL +S +++ L+ +I L++ +E + +++
Sbjct: 126 YRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQM 181
>gi|357167884|ref|XP_003581379.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 485
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 112/182 (61%), Gaps = 7/182 (3%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL LA++K + AL K++ + DP+E D E +T EE F KMG K Y+ +GRRG
Sbjct: 153 KLKLARKKEERLLAALKKIEPN-DPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRG 211
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + +++IVK + +VK+IA L SGG+++S+ +G II+
Sbjct: 212 IYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIASELAILSGGIVLSIQ---EGNTIIM 268
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
YRGKNY +P + P+ L R++AL +S R L+ +I L++ +E + +++ ++
Sbjct: 269 YRGKNYAQPPPEIMSPKIALPRKKALDKSKYRDRLRALRRYIPRLEQELEDLHAQM-KLS 327
Query: 805 GG 806
GG
Sbjct: 328 GG 329
>gi|242073570|ref|XP_002446721.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
gi|241937904|gb|EES11049.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
Length = 484
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 109/177 (61%), Gaps = 6/177 (3%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL LA++K + AL K+ E DP+E D E +T EE F KMG K Y+ +GRRG
Sbjct: 152 KLKLARKKEERLVAALKKI-EPEDPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRG 210
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + +++IVK + +VK+IA L SGG+++ + G II+
Sbjct: 211 IYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIATELARLSGGIVLDIQ---DGNTIIM 267
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELE 801
YRGKNY +P + P+ L+R++AL +S +++ L+ +I L++ +E + ++++
Sbjct: 268 YRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQMK 324
>gi|255572670|ref|XP_002527268.1| conserved hypothetical protein [Ricinus communis]
gi|223533361|gb|EEF35112.1| conserved hypothetical protein [Ricinus communis]
Length = 458
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 110/176 (62%), Gaps = 12/176 (6%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL A++K + +AL K+ E +D +E D E +T EE F KMGL K Y+ +GRRG
Sbjct: 138 KLKKAQKKEERYVQALKKI-EPVDSSETTHDPEILTPEEHFFFLKMGLKCKNYVPVGRRG 196
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + V+++VK S +VK+IA L +GG+++ + + II+
Sbjct: 197 IYQGVILNMHLHWKKHQTVQVVVKTFSPEEVKEIAAELARLTGGIVLDIHEEN---TIIM 253
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGL---KHHILDLQERIELVK 797
YRGKNY +P + P+ L+R++AL +S + R+GL +++I L++ +EL+K
Sbjct: 254 YRGKNYSQPPTEIMSPRITLSRKKALDKS---KYRDGLRAVRNYIPRLEQDLELLK 306
>gi|115459160|ref|NP_001053180.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|21740788|emb|CAD41533.1| OSJNBb0091E11.2 [Oryza sativa Japonica Group]
gi|38346227|emb|CAE02049.2| OJ990528_30.7 [Oryza sativa Japonica Group]
gi|90265163|emb|CAH67731.1| H0522A01.2 [Oryza sativa Indica Group]
gi|113564751|dbj|BAF15094.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|116310744|emb|CAH67539.1| H0425E08.7 [Oryza sativa Indica Group]
gi|125548841|gb|EAY94663.1| hypothetical protein OsI_16441 [Oryza sativa Indica Group]
Length = 479
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL LA+ K + AL K+ E DP+E D E +T EE F KMG K Y+ +GRRG
Sbjct: 146 KLKLARNKEERLVAALTKI-EPDDPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRG 204
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + +++IVK + +VK+IA L SGG+++ + +G II+
Sbjct: 205 IYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLSGGIVLDIQ---EGNTIIM 261
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
YRGKNY +P + P+ L R++AL +S +R L+ +I L++ +
Sbjct: 262 YRGKNYAQPPPEIMSPKVTLPRKKALDKSKYRERLRALRRYIPRLEQEL 310
>gi|356501797|ref|XP_003519710.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 382
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL A++K + +AL K+ E + +E D E +T EE F KMGL K Y+ +GRRG
Sbjct: 85 KLLKARKKEERLCEALKKI-EPAESSETTHDPEILTPEEHFFFLKMGLKSKNYVPVGRRG 143
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + +K++VK S +VK+IA L SGG+++ + + II+
Sbjct: 144 IYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIATELARLSGGIVLDIHEDN---TIIM 200
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
YRGKNY +P + P+ L+R++AL +S ++ HI L++ +E+++++
Sbjct: 201 YRGKNYSQPPTEIMSPRVSLSRKKALDKSKYRDALRAVRRHIPRLEQELEILRAQF 256
>gi|413946393|gb|AFW79042.1| hypothetical protein ZEAMMB73_840751, partial [Zea mays]
Length = 140
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 90/143 (62%), Gaps = 4/143 (2%)
Query: 508 MAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLT-DIRQDEEERARHVA 566
MAEE+K LTGGTLL RNK YIV YRG DFLP V + ER +LT DI EE+R R +
Sbjct: 1 MAEEIKNLTGGTLLLRNKFYIVIYRGKDFLPTSVAAVLAEREELTKDIYNMEEQRRRVL- 59
Query: 567 SALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQ 626
+ + G G +AGTLAE A +RWGR+ + ++ E+M S+ S L R LE
Sbjct: 60 --ITQPSDDGLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSEKQKLYRKLEH 117
Query: 627 KLALAKRKLKMADKALAKVQESL 649
KL++A+ K+ A++ L+K++ SL
Sbjct: 118 KLSIAQAKIHRAERLLSKIEASL 140
>gi|9279724|dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]
Length = 1115
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 110/182 (60%), Gaps = 8/182 (4%)
Query: 625 EQKLALAKRKLKMADKALAKVQESLDP---AELPSDLETITNEERFLLRKMGLSMKPYLL 681
E+K+ RK + ++ L + + L+P AE D E +T EE F KMGL K Y+
Sbjct: 809 EEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 868
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
+GRRGIY G I NMHLHWK + +++++K + +VK+IA+ L +GG+++ + +G
Sbjct: 869 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVH---EG 925
Query: 742 IAIIVYRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSE 799
II+YRGKNYV+P + P+ L R++AL +S ++ +I L++ ++L++++
Sbjct: 926 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 985
Query: 800 LE 801
E
Sbjct: 986 AE 987
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
E + PE L+ + L+ VG GI Q ++ ++H WK + +++ + ++
Sbjct: 846 EILTPEEHFYYLK-MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEV 904
Query: 307 KRTHEILERRTGGLVI-WRSGSSVVLFRGMAYKLP 340
K L R TGG+V+ G++++++RG Y P
Sbjct: 905 KEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQP 939
>gi|224132018|ref|XP_002321235.1| predicted protein [Populus trichocarpa]
gi|222862008|gb|EEE99550.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 10/184 (5%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL A+RK + +AL K+ E + +E D E +T EE F KMGL K Y+ +GRRG
Sbjct: 97 KLRKAQRKEERFVQALKKI-EPKESSEATHDPEILTPEEHFFFLKMGLKCKNYVPVGRRG 155
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + +K++VK + +VK+IA L +GG+++ + + II+
Sbjct: 156 IYQGVILNMHLHWKKHQTLKVVVKTFTPEEVKEIAAELARFTGGIVLDIHEEN---TIIM 212
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIE 804
YRGKNY +P + P+ L+R++AL +S L+ +I LQ+ +EL+ +
Sbjct: 213 YRGKNYSQPPTEIMSPRVTLSRKKALDKSKCRDGLRALRRYIPRLQQDLELLHARA---- 268
Query: 805 GGKT 808
GGKT
Sbjct: 269 GGKT 272
>gi|145332683|ref|NP_001078207.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|332643491|gb|AEE77012.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 380
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 110/182 (60%), Gaps = 8/182 (4%)
Query: 625 EQKLALAKRKLKMADKALAKVQESLDP---AELPSDLETITNEERFLLRKMGLSMKPYLL 681
E+K+ RK + ++ L + + L+P AE D E +T EE F KMGL K Y+
Sbjct: 74 EEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 133
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
+GRRGIY G I NMHLHWK + +++++K + +VK+IA+ L +GG+++ + +G
Sbjct: 134 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVH---EG 190
Query: 742 IAIIVYRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSE 799
II+YRGKNYV+P + P+ L R++AL +S ++ +I L++ ++L++++
Sbjct: 191 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 250
Query: 800 LE 801
E
Sbjct: 251 AE 252
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
E + PE L+ + L+ VG GI Q ++ ++H WK + +++ + ++
Sbjct: 111 EILTPEEHFYYLK-MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEV 169
Query: 307 KRTHEILERRTGGLVI-WRSGSSVVLFRGMAYKLP 340
K L R TGG+V+ G++++++RG Y P
Sbjct: 170 KEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQP 204
>gi|79417439|ref|NP_189171.2| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|75116513|sp|Q67XL4.1|Y3544_ARATH RecName: Full=Uncharacterized CRM domain-containing protein
At3g25440, chloroplastic; Flags: Precursor
gi|51971805|dbj|BAD44567.1| unknown protein [Arabidopsis thaliana]
gi|332643490|gb|AEE77011.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 444
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 110/182 (60%), Gaps = 8/182 (4%)
Query: 625 EQKLALAKRKLKMADKALAKVQESLDP---AELPSDLETITNEERFLLRKMGLSMKPYLL 681
E+K+ RK + ++ L + + L+P AE D E +T EE F KMGL K Y+
Sbjct: 138 EEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 197
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
+GRRGIY G I NMHLHWK + +++++K + +VK+IA+ L +GG+++ + +G
Sbjct: 198 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVH---EG 254
Query: 742 IAIIVYRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSE 799
II+YRGKNYV+P + P+ L R++AL +S ++ +I L++ ++L++++
Sbjct: 255 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 314
Query: 800 LE 801
E
Sbjct: 315 AE 316
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
E + PE L+ + L+ VG GI Q ++ ++H WK + +++ + ++
Sbjct: 175 EILTPEEHFYYLK-MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEV 233
Query: 307 KRTHEILERRTGGLVI-WRSGSSVVLFRGMAYKLP 340
K L R TGG+V+ G++++++RG Y P
Sbjct: 234 KEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQP 268
>gi|356498434|ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like, partial [Glycine max]
Length = 383
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL A++K + +AL K+ E + +E D E +T EE F KMGL K Y+ +GRRG
Sbjct: 65 KLLKARKKEERLCEALKKI-EPAESSETTHDPEILTPEEHFFFLKMGLKSKNYVPVGRRG 123
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + +K++VK S +VK+IA L SGG+++ + + II+
Sbjct: 124 IYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIAAELARLSGGIVLDIHEDN---TIIM 180
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
YRGKNY +P + P+ L+R++AL +S ++ +I L++ +E+++++
Sbjct: 181 YRGKNYSQPPTEIMSPRVSLSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQF 236
>gi|449458069|ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
gi|449516505|ref|XP_004165287.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 500
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 14/183 (7%)
Query: 625 EQKLALAKRKLKMADKALAKVQESLDPAE---LPSDLETITNEERFLLRKMGLSMKPYLL 681
E+K+ K + +K L + E ++PA+ D E +T EE F KMG+ K Y+
Sbjct: 172 EEKILFKMNKARKKEKRLVEALEKIEPADSSDTTHDPEILTPEEHFYFLKMGIKGKNYVP 231
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
+GRRGIY G I NMHLHWK + VK++VK S +VK+IA L +GG+++ + +
Sbjct: 232 VGRRGIYQGVILNMHLHWKKHQTVKVVVKTFSPEEVKEIAAELARLTGGLVLDIHEED-- 289
Query: 742 IAIIVYRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGL---KHHILDLQERIELV 796
II+YRGKNY +P + P+ L+R++AL +S + R+GL + HI L++ + +
Sbjct: 290 -TIIMYRGKNYSQPPTEIMSPRVSLSRKKALDKS---KYRDGLRAVRKHIPKLEQELRFL 345
Query: 797 KSE 799
+S+
Sbjct: 346 QSQ 348
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 247 EKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQM 306
E + PE L+ + ++ VG GI Q ++ ++H WK + VK+ + ++
Sbjct: 209 EILTPEEHFYFLK-MGIKGKNYVPVGRRGIYQGVILNMHLHWKKHQTVKVVVKTFSPEEV 267
Query: 307 KRTHEILERRTGGLVI-WRSGSSVVLFRGMAYKLP 340
K L R TGGLV+ +++++RG Y P
Sbjct: 268 KEIAAELARLTGGLVLDIHEEDTIIMYRGKNYSQP 302
>gi|297739537|emb|CBI29719.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 110/178 (61%), Gaps = 12/178 (6%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL A+RK + +AL K+ E + +E D E +T EE F KMGL K Y+ +GRRG
Sbjct: 10 KLRKARRKEERLAEALTKI-EPKESSETTHDPEILTPEEHFFFLKMGLKCKNYVPIGRRG 68
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + ++++VK S +VK+IA+ L +GG+++ + + II+
Sbjct: 69 IYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIVLDIHEEN---TIIM 125
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGL---KHHILDLQERIELVKSE 799
YRGKNY +P + P+ L+R++AL +S + R+GL + +I L+ +EL++++
Sbjct: 126 YRGKNYSQPPTEIMSPRITLSRKKALDKS---KYRDGLRAVRKYIPRLEGDLELLQAQ 180
>gi|225448146|ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Vitis vinifera]
Length = 401
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 110/178 (61%), Gaps = 12/178 (6%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL A+RK + +AL K+ E + +E D E +T EE F KMGL K Y+ +GRRG
Sbjct: 80 KLRKARRKEERLAEALTKI-EPKESSETTHDPEILTPEEHFFFLKMGLKCKNYVPIGRRG 138
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + ++++VK S +VK+IA+ L +GG+++ + + II+
Sbjct: 139 IYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIVLDIHEEN---TIIM 195
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGL---KHHILDLQERIELVKSE 799
YRGKNY +P + P+ L+R++AL +S + R+GL + +I L+ +EL++++
Sbjct: 196 YRGKNYSQPPTEIMSPRITLSRKKALDKS---KYRDGLRAVRKYIPRLEGDLELLQAQ 250
>gi|357439975|ref|XP_003590265.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479313|gb|AES60516.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 443
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 12/187 (6%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL A++K + +AL K+ E + +E D E +T EE F KMGL K Y+ +GRRG
Sbjct: 125 KLLKARKKEERLREALKKI-EPTESSETIHDPEILTPEEHFFFLKMGLKSKNYVPVGRRG 183
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + ++++VK S +VK+IA L +GG+++ + + II+
Sbjct: 184 IYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLGIHEED---TIIM 240
Query: 747 YRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGL---KHHILDLQERIELVKSELE 801
YRGKNY +P + P+ L R++AL +S + R+GL + +I L++ +E+++++ +
Sbjct: 241 YRGKNYSQPPTEIMSPRVTLPRKKALDKS---KYRDGLRAVRRYIPKLEQELEILRAQFQ 297
Query: 802 EIEGGKT 808
T
Sbjct: 298 STAESNT 304
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
F ++ K+ + +GR QG+ M W+K ++ +K E +A EL +L
Sbjct: 166 FLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKE-IATELARL 224
Query: 516 TGGTLL-CRNKDYIVFYRGNDFLPP 539
TGG +L +D I+ YRG ++ P
Sbjct: 225 TGGIVLGIHEEDTIIMYRGKNYSQP 249
>gi|297831446|ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329445|gb|EFH59864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1055
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 108/178 (60%), Gaps = 6/178 (3%)
Query: 626 QKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRR 685
KL A++K + + + K++ S + AE D E +T EE F KMGL K Y+ +GRR
Sbjct: 757 NKLTKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRR 815
Query: 686 GIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAII 745
GIY G I NMHLHWK + +++++K + +V +IA+ L +GG+++ + +G II
Sbjct: 816 GIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVNEIAVELARLTGGIVLDVH---EGNTII 872
Query: 746 VYRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELE 801
+YRGKNYV+P + P+ L R++AL +S ++ +I L++ ++L++++ E
Sbjct: 873 MYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQAE 930
>gi|297822421|ref|XP_002879093.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
gi|297324932|gb|EFH55352.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
Length = 345
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
K AL KLK + +AKVQ P P + IT EERF L+KMG Y+ +GRRG
Sbjct: 135 KEALLIEKLKRYE--VAKVQ---GPEVRPHE---ITGEERFYLKKMGQKRSNYVPIGRRG 186
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSL--DKTPKGIAI 744
++ G I NMHLHWK E VK+I QV+Q A L SGGV V++ D T I
Sbjct: 187 VFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDT-----I 241
Query: 745 IVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIEL 795
I YRGK YV+P + P + L++++A +S Q E ++H I ++ +EL
Sbjct: 242 IFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHSIAIAEKELEL 292
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++ +K + +GR G+ M W+K K+ I + + ++ AEEL KL
Sbjct: 169 LKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKV-ICNNSKPGQVQQYAEELAKL 227
Query: 516 TGGT-LLCRNKDYIVFYRGNDFLPPVVTDAVKERSK 550
+GG + D I+FYRG ++ P V + SK
Sbjct: 228 SGGVPVNIIGDDTIIFYRGKGYVQPQVMSPIDTLSK 263
>gi|125590852|gb|EAZ31202.1| hypothetical protein OsJ_15301 [Oryza sativa Japonica Group]
Length = 484
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 8/146 (5%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL LA+ K + AL K+ E DP+E D E +T EE F KMG K Y+ +GRRG
Sbjct: 146 KLKLARNKEERLVAALTKI-EPDDPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRG 204
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + +++IVK + +VK+IA L SGG+++ + +G II+
Sbjct: 205 IYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLSGGIVLDIQ---EGNTIIM 261
Query: 747 YRGKNYVRPLKLRPQNLLTRRQALAR 772
YRGKNY +P P +++ + L R
Sbjct: 262 YRGKNYAQP----PPEIMSPKVTLPR 283
>gi|15226402|ref|NP_180415.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|4510396|gb|AAD21483.1| hypothetical protein [Arabidopsis thaliana]
gi|44917583|gb|AAS49116.1| At2g28480 [Arabidopsis thaliana]
gi|110741747|dbj|BAE98819.1| hypothetical protein [Arabidopsis thaliana]
gi|330253035|gb|AEC08129.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 372
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQI 720
IT EERF L+KMG Y+ +GRRG++ G I NMHLHWK E VK+I QV+Q
Sbjct: 164 ITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQY 223
Query: 721 AISLEAESGGVLVSL--DKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQR 778
A L SGGV V++ D T II YRGK YV+P + P + L++++A +S Q
Sbjct: 224 AEELAKLSGGVPVNIIGDDT-----IIFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQS 278
Query: 779 REGLKHHILDLQERIEL 795
E ++H I ++ +EL
Sbjct: 279 LESVRHFIAIAEKELEL 295
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++ +K + +GR G+ M W+K K+ I + + ++ AEEL KL
Sbjct: 172 LKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKV-ICNNSKPGQVQQYAEELAKL 230
Query: 516 TGGTLL-CRNKDYIVFYRGNDFLPPVVTDAVKERSK 550
+GG + D I+FYRG ++ P V + SK
Sbjct: 231 SGGVPVNIIGDDTIIFYRGKGYVQPQVMSPIDTLSK 266
>gi|357439925|ref|XP_003590240.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479288|gb|AES60491.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 472
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 92/161 (57%), Gaps = 8/161 (4%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL A++K + +AL K+ E + +E D E +T EE F KMGL K Y+ +GRRG
Sbjct: 125 KLLKARKKEERLREALKKI-EPTESSETIHDPEILTPEEHFFFLKMGLKSKNYVPVGRRG 183
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
IY G I NMHLHWK + ++++VK S +VK+IA L +GG+++ + + II+
Sbjct: 184 IYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLGIHEED---TIIM 240
Query: 747 YRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHIL 787
YRGKNY +P P +++ R L R L + HH +
Sbjct: 241 YRGKNYSQP----PTEIMSPRVTLPRKKVLHVPKDCLHHTI 277
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
F ++ K+ + +GR QG+ M W+K ++ +K E +A EL +L
Sbjct: 166 FLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKE-IATELARL 224
Query: 516 TGGTLL-CRNKDYIVFYRGNDFLPP 539
TGG +L +D I+ YRG ++ P
Sbjct: 225 TGGIVLGIHEEDTIIMYRGKNYSQP 249
>gi|115467732|ref|NP_001057465.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|113595505|dbj|BAF19379.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|125596971|gb|EAZ36751.1| hypothetical protein OsJ_21087 [Oryza sativa Japonica Group]
Length = 348
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 128/265 (48%), Gaps = 31/265 (11%)
Query: 563 RHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASL-- 620
RH ++A+ GF V G A T R G+ P+ +KM R + +++
Sbjct: 73 RHGSTAVTLDTGGGFARFSVGGD-AGTKQGAGRKGQPPAKAAKKKMSRKAKVNQLKWYRL 131
Query: 621 --------------LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEER 666
+RY KL AKRK + + L K + P + D E +T EE+
Sbjct: 132 KAKKKMKSPNPEVRIRY---KLEKAKRKEEWLIEKLRKYEVPRSPEPV-HDPEILTEEEK 187
Query: 667 FLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEA 726
F L++ G K Y+ +GRRG++ G + NMHLHWK E VK+I K QV + A L
Sbjct: 188 FYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTR 247
Query: 727 ESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALAR-----SVE--LQRR 779
S G ++ + II YRGKNYV+P + P + L++++AL + S+E Q
Sbjct: 248 LSKGTVIDIKPN---NTIIFYRGKNYVQPKVMSPPDTLSKQKALEKYRYEQSLEHTSQFI 304
Query: 780 EGLKHHILDLQERIELVKSELEEIE 804
E L+ + D Q+ + L K+ E +E
Sbjct: 305 EKLEKELEDYQKHVALFKNRGETLE 329
>gi|225444203|ref|XP_002270373.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Vitis vinifera]
gi|296089227|emb|CBI38999.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 122/261 (46%), Gaps = 39/261 (14%)
Query: 561 RARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASL 620
RAR++++ IELK V G L + +K MR +SR A L
Sbjct: 13 RARYMSNTSIELKPDSDVVRFNIGELPGKTGTSK---------KGKKKMRRVKMSRKAKL 63
Query: 621 --LRY-----------------LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETI 661
LR+ + KL AKRK + + L K P E D E +
Sbjct: 64 NELRFYRLKAKKKMTSPNPEVRIRYKLEKAKRKEEWLIEKLRKFDIPKAPTE-AYDPEIL 122
Query: 662 TNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIA 721
T EE+F L++ G K Y+ +GRRG++ G + NMHLHWK E VK+I K QV + A
Sbjct: 123 TEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCKVGQVYEYA 182
Query: 722 ISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREG 781
L S G+++ D P II YRGKNYV+P + P + L++ +AL E R E
Sbjct: 183 EELARLSKGIMI--DIKPNN-TIIFYRGKNYVQPQVMSPPDTLSKSKAL----EKYRYEQ 235
Query: 782 LKHHILDLQERIELVKSELEE 802
H E++E +ELEE
Sbjct: 236 SLEHTSQFIEKLE---NELEE 253
>gi|125547308|gb|EAY93130.1| hypothetical protein OsI_14936 [Oryza sativa Indica Group]
Length = 103
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 55/73 (75%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E++ L DELGPR+ DWP +P P+DADLLP VP YKPP R+LPYG++P L +TT R
Sbjct: 24 EIDKLSDELGPRYDDWPRPDPSPIDADLLPATVPGYKPPFRVLPYGVRPSLSRRDTTNLR 83
Query: 458 RLARKTPPHFALG 470
RLAR PPHFALG
Sbjct: 84 RLARGLPPHFALG 96
>gi|449479099|ref|XP_004155504.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 290
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 32/261 (12%)
Query: 562 ARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLL 621
RH ++A++ELK G + T + +++ + + +S+ A L
Sbjct: 30 VRHFSNAVVELKTDNNTVRFSFGCPSSTNGSR-----------LKQKVAKTKMSKKAKLN 78
Query: 622 RYLEQKLALAKRK------------LKMADKALAKVQESLDPAELPS------DLETITN 663
+L K+K L+ A + A + E L E+P D E +T
Sbjct: 79 ELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKPFVEKYDPEILTE 138
Query: 664 EERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAIS 723
EE+ L++ G K ++LLGRRG++ G + NMH+HWK E VK+I K QV + A
Sbjct: 139 EEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEE 198
Query: 724 LEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLK 783
L S G+++ D P +II YRGKNYV+P + P N L++ +AL + Q E
Sbjct: 199 LTRLSKGIVI--DIKPNN-SIIFYRGKNYVQPEVMSPPNTLSKDKALEKYKYEQSLEHTS 255
Query: 784 HHILDLQERIELVKSELEEIE 804
I L++ +E + L + +
Sbjct: 256 QFIEKLEKELEDFQKHLAQFK 276
>gi|255585329|ref|XP_002533362.1| conserved hypothetical protein [Ricinus communis]
gi|223526802|gb|EEF29024.1| conserved hypothetical protein [Ricinus communis]
Length = 412
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 98/186 (52%), Gaps = 25/186 (13%)
Query: 626 QKLALAKRKLKMADKALAKVQESL--------------DPAELPSDLETITNEERFLLRK 671
QK A A+ ++K + AK++E+L P P DL T EERF ++K
Sbjct: 99 QKFANAEERIKYKLER-AKIKEALLVERLKRYEVPKVQGPEVKPHDL---TGEERFFMKK 154
Query: 672 MGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGV 731
M Y+ LGRRG++ G I NMH+HWK E VK+I QV + A + SGG+
Sbjct: 155 MAQKQSNYVPLGRRGVFGGVILNMHMHWKKHETVKVICNFCKPGQVHEYAQEIARLSGGI 214
Query: 732 LVSL--DKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDL 789
+ + D T II YRGKNYV+P + P + L++++AL +S Q E ++ I
Sbjct: 215 PIQVIGDDT-----IIFYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIA 269
Query: 790 QERIEL 795
++ +EL
Sbjct: 270 EKELEL 275
>gi|224095670|ref|XP_002310431.1| predicted protein [Populus trichocarpa]
gi|222853334|gb|EEE90881.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 632 KRKLKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRR 685
K KL+ A AK+ E L E+P +T EERF ++KM Y+ +GRR
Sbjct: 78 KTKLERARIKEAKLVERLKRYEVPKMQGPEVKPHELTGEERFFMKKMAQKKSNYVPIGRR 137
Query: 686 GIYDGTIENMHLHWKYRELVKIIVKGKSF-AQVKQIAISLEAESGGVLVSL--DKTPKGI 742
G++ G I NMH+HWK E VK+I QV++ A + SGG+ + + D T
Sbjct: 138 GVFGGVILNMHMHWKKHETVKVICNSSCKPGQVQEFAQEIARLSGGIPIQIIGDDT---- 193
Query: 743 AIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIEL 795
+I YRGKNYV+P + P + L++++AL +S Q E ++H I ++ +EL
Sbjct: 194 -VIFYRGKNYVQPKVMSPVDTLSKKKALEKSKYEQSLETVRHFIAIAEKELEL 245
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++A+K + +GR G+ M W+K K+ + + A+E+ +L
Sbjct: 121 MKKMAQKKSNYVPIGRRGVFGGVILNMHMHWKKHETVKVICNSSCKPGQVQEFAQEIARL 180
Query: 516 TGGT-LLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKA 574
+GG + D ++FYRG +++ P V V SK + + + E++ I +
Sbjct: 181 SGGIPIQIIGDDTVIFYRGKNYVQPKVMSPVDTLSKKKALEKSKYEQSLETVRHFIAIAE 240
Query: 575 K 575
K
Sbjct: 241 K 241
>gi|125555042|gb|EAZ00648.1| hypothetical protein OsI_22670 [Oryza sativa Indica Group]
Length = 304
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 37/258 (14%)
Query: 563 RHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASL-- 620
RH ++A+ GF V G A T R G+ P+ +KM R + +++
Sbjct: 49 RHGSTAVTLDTGGGFARFSVGGD-AGTKQGAGRKGQPPAKAAKKKMSRKAKVNQLKWYRL 107
Query: 621 --------------LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEER 666
+RY KL AKRK + + L K + P + D E +T EE+
Sbjct: 108 KAKKTMKSPNPEVRIRY---KLEKAKRKEEWLIEKLRKYEVPRSPEPV-HDPEILTEEEK 163
Query: 667 FLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEA 726
F L++ G K Y+ +GRRG++ G + NMHLHWK E VK+I K QV + A L
Sbjct: 164 FYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTR 223
Query: 727 ESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHI 786
S G ++ + II YRGKNYV+P + P + L++++ L+ +
Sbjct: 224 LSKGTVIDIKPN---NTIIFYRGKNYVQPKVMSPPDTLSKQK-------------LEKEL 267
Query: 787 LDLQERIELVKSELEEIE 804
D Q+ + L K+ E +E
Sbjct: 268 EDYQKHVALFKNRGETLE 285
>gi|449438181|ref|XP_004136868.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 352
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 32/263 (12%)
Query: 560 ERARHVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHAS 619
+ RH ++A++ELK G + T + +++ + + +S+ A
Sbjct: 90 QSVRHFSNAVVELKTDNNTVRFSFGCPSSTNGSR-----------LKQKVAKTKMSKKAK 138
Query: 620 LLRYLEQKLALAKRK------------LKMADKALAKVQESLDPAELPS------DLETI 661
L +L K+K L+ A + A + E L E+P D E +
Sbjct: 139 LNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKPFVEKYDPEIL 198
Query: 662 TNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIA 721
T EE+ L++ G K ++LLGRRG++ G + NMH+HWK E VK+I K QV + A
Sbjct: 199 TEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYA 258
Query: 722 ISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREG 781
L S G+++ D P +II YRGKNYV+P + P N L++ +AL + Q E
Sbjct: 259 EELTRLSKGIVI--DIKPNN-SIIFYRGKNYVQPEVMSPPNTLSKDKALEKYKYEQSLEH 315
Query: 782 LKHHILDLQERIELVKSELEEIE 804
I L++ +E + L + +
Sbjct: 316 TSQFIEKLEKELEDFQKHLAQFK 338
>gi|242055631|ref|XP_002456961.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
gi|241928936|gb|EES02081.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
Length = 405
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 15/179 (8%)
Query: 621 LRYLEQKLALAKRKL--KMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKP 678
L+Y +K L + +L K+ +AK Q P P DL + EERF L+K+
Sbjct: 137 LKYKIEKAKLKEVRLVEKLKKYEVAKAQ---GPMAKPDDL---SGEERFYLKKVSQKKSN 190
Query: 679 YLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSL--D 736
Y+ +GRRG++ G I NMHLHWK E VK+I K Q+++ A + SGG+ V++ D
Sbjct: 191 YVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPVNIIGD 250
Query: 737 KTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIEL 795
T I+ YRGKNYV+P + P + L++++AL +S Q E ++ I ++ +EL
Sbjct: 251 DT-----IVFYRGKNYVQPEVMSPIDTLSKKKALEKSKYEQSLETVRRFIAISEKELEL 304
>gi|356524301|ref|XP_003530768.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 627 KLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRG 686
KL AKRK + L K P E D E +T EER L++ G K Y+ +GRRG
Sbjct: 92 KLEKAKRKETWLVEKLRKFDVPKSPPET-FDPEILTEEERHYLKRTGEKKKHYVPVGRRG 150
Query: 687 IYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIV 746
++ G + NMHLHWK E VK+I K QV + A L S G+++ D P II
Sbjct: 151 VFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLSKGIVI--DIKPNN-TIIF 207
Query: 747 YRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSELEEIEGG 806
YRGKNYV+P + P N L++ +AL + Q E I L++ +E L + + G
Sbjct: 208 YRGKNYVQPEVMSPPNTLSKVKALEKYRYEQSLEHTSQFIERLEKELEEYHQHLAKFKKG 267
Query: 807 K 807
K
Sbjct: 268 K 268
>gi|357478871|ref|XP_003609721.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355510776|gb|AES91918.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 399
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 20/185 (10%)
Query: 621 LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPS---DLETITNEERFLLRKMGLSMK 677
+RY KL AKRK + L K D +LP+ D E +T EER L++ G K
Sbjct: 216 IRY---KLEKAKRKETWLIEKLRK----FDVPKLPTETFDPEILTEEERHYLKRTGEKKK 268
Query: 678 PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDK 737
Y+ +GRRG++ G + NMHLHWK E VK+I K Q + A L S G+++ D
Sbjct: 269 HYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQAHEYAEELARLSKGIVI--DI 326
Query: 738 TPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVK 797
P I II YRGKNYV+P + P + L++ A+++E R E H ER+E
Sbjct: 327 KPNSI-IIFYRGKNYVQPKVMSPPDTLSK----AKALEKYRYEQSLEHTSQFIERLE--- 378
Query: 798 SELEE 802
ELEE
Sbjct: 379 KELEE 383
>gi|359478175|ref|XP_002266278.2| PREDICTED: uncharacterized protein LOC100250974 [Vitis vinifera]
Length = 711
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 660 TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQ 719
+T EERF ++KM Y+ +GRRG++ G I NMH+HWK E VK+I K QV +
Sbjct: 453 NLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQVHE 512
Query: 720 IAISLEAESGGVLVSL--DKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQ 777
A + SGG + + D T II YRGKNYV+P + P + L++++AL +S Q
Sbjct: 513 YANEIARLSGGTPIQIIGDDT-----IIFYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQ 567
Query: 778 RREGLKHHILDLQERIEL 795
E ++ I ++ +EL
Sbjct: 568 SLESVRRFIAIAEKELEL 585
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++A+K + +GR G+ M W+K K+ I + + A E+ +L
Sbjct: 462 MKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKV-ICKPCKPGQVHEYANEIARL 520
Query: 516 TGGT-LLCRNKDYIVFYRGNDFLPPVVTDAVKERSK 550
+GGT + D I+FYRG +++ P V + SK
Sbjct: 521 SGGTPIQIIGDDTIIFYRGKNYVQPEVMSPIDTLSK 556
>gi|242076260|ref|XP_002448066.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
gi|241939249|gb|EES12394.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
Length = 338
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 621 LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYL 680
+RY KL AKRK + + L K P + D E +T EE+F L++ G K Y+
Sbjct: 135 IRY---KLEKAKRKEEWLIEKLRKYDVPRTPEPV-HDPEILTEEEKFYLKRTGEKKKNYV 190
Query: 681 LLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPK 740
+GRRG++ G + NMHLHWK E VK++ K QV + A L S G ++ D P
Sbjct: 191 PVGRRGVFGGVVLNMHLHWKNHETVKVVCKPCRPGQVYEYAEELTRLSKGTII--DIKPN 248
Query: 741 GIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
I+ YRGKNYV+P + P + L++++AL + LQ E I L++ +E K +
Sbjct: 249 N-TIMFYRGKNYVQPQVMSPPDTLSKQKALEKYRYLQSLEHTSQFIEKLEKELEDYKKHV 307
>gi|147820521|emb|CAN67658.1| hypothetical protein VITISV_012474 [Vitis vinifera]
Length = 375
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 660 TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQ 719
+T EERF ++KM Y+ +GRRG++ G I NMH+HWK E VK+I K QV +
Sbjct: 117 NLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQVHE 176
Query: 720 IAISLEAESGGVLVSL--DKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQ 777
A + SGG + + D T II YRGKNYV+P + P + L++++AL +S Q
Sbjct: 177 YANEIARLSGGTPIQIIGDDT-----IIFYRGKNYVQPEXMSPIDTLSKKRALEKSKYEQ 231
Query: 778 RREGLKHHILDLQERIEL 795
E ++ I ++ +EL
Sbjct: 232 SLESVRRFIAIAEKELEL 249
>gi|255567361|ref|XP_002524660.1| conserved hypothetical protein [Ricinus communis]
gi|223536021|gb|EEF37679.1| conserved hypothetical protein [Ricinus communis]
Length = 260
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 9/145 (6%)
Query: 634 KLKMADKALAKVQESLDPAELP------SDLETITNEERFLLRKMGLSMKPYLLLGRRGI 687
KL+ A + A + E L E+P D E +T EE+ L++ G K ++L+GRRG+
Sbjct: 73 KLEKAKRKEAWLIEKLSKFEVPKLRAETCDPEMLTEEEKHYLKRTGEKKKNFILVGRRGV 132
Query: 688 YDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVY 747
+ G + NMHLHWK E VKII K Q+ Q A L S G+++ D P +II Y
Sbjct: 133 FGGVVLNMHLHWKKHETVKIICKPCKPGQIHQYAEELARLSKGIVI--DIRPNN-SIIFY 189
Query: 748 RGKNYVRPLKLRPQNLLTRRQALAR 772
RGKNYV+P + P + L++ +AL +
Sbjct: 190 RGKNYVQPTVMSPPDTLSKNKALEK 214
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 249 MIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKR 308
M+ E E L+ + VG G+ +V ++H WK E VK+ + Q+ +
Sbjct: 105 MLTEEEKHYLKRTGEKKKNFILVGRRGVFGGVVLNMHLHWKKHETVKIICKPCKPGQIHQ 164
Query: 309 THEILERRTGGLVI-WRSGSSVVLFRGMAYKLPCVQS 344
E L R + G+VI R +S++ +RG Y P V S
Sbjct: 165 YAEELARLSKGIVIDIRPNNSIIFYRGKNYVQPTVMS 201
>gi|162459283|ref|NP_001105859.1| LOC732768 [Zea mays]
gi|89212802|gb|ABD63903.1| CFM6 [Zea mays]
gi|413918693|gb|AFW58625.1| hypothetical protein ZEAMMB73_217436 [Zea mays]
Length = 338
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 621 LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYL 680
+RY KL AKRK + + L K + P + D E +T EE+F L++ G K Y+
Sbjct: 134 IRY---KLEKAKRKEEWLIEKLRKYEVPRTPEPV-HDPEILTEEEKFYLKRTGEKKKNYV 189
Query: 681 LLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPK 740
+GRRG++ G + NMHLHWK E VK++ K QV + A L S G ++ D P
Sbjct: 190 PVGRRGVFGGVVLNMHLHWKKHETVKVVCKPCRPGQVYEYAEELTRLSKGTVI--DIKPN 247
Query: 741 GIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIELVKSEL 800
I+ YRGKNYV+P + P L++++AL + LQ E I L++ +E K +
Sbjct: 248 N-TIMFYRGKNYVQPKVMSPPETLSKQKALEKYRYLQSLEHTSQFIEKLEKELEDYKKHV 306
>gi|297743805|emb|CBI36688.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 660 TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQ 719
+T EERF ++KM Y+ +GRRG++ G I NMH+HWK E VK+I K QV +
Sbjct: 74 NLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQVHE 133
Query: 720 IAISLEAESGGVLVSL--DKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQ 777
A + SGG + + D T II YRGKNYV+P + P + L++++AL +S Q
Sbjct: 134 YANEIARLSGGTPIQIIGDDT-----IIFYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQ 188
Query: 778 RREGLKHHILDLQERIEL 795
E ++ I ++ +EL
Sbjct: 189 SLESVRRFIAIAEKELEL 206
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++A+K + +GR G+ M W+K K+ K +E A E+ +L
Sbjct: 83 MKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQVHE-YANEIARL 141
Query: 516 TGGT-LLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERA-----RHVASAL 569
+GGT + D I+FYRG +++ P V + SK + + + E++ R +A A
Sbjct: 142 SGGTPIQIIGDDTIIFYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAE 201
Query: 570 IEL 572
EL
Sbjct: 202 KEL 204
>gi|449437795|ref|XP_004136676.1| PREDICTED: uncharacterized protein LOC101208777 [Cucumis sativus]
gi|449494725|ref|XP_004159629.1| PREDICTED: uncharacterized LOC101208777 [Cucumis sativus]
Length = 431
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 651 PAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVK 710
P P DL T EERF ++KMG Y+ +GRRG++ G I NMH+HWK E VK+ K
Sbjct: 161 PMVKPHDL---TGEERFYIKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCK 217
Query: 711 GKSFAQVKQIAISLEAESGGVLVSL--DKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQ 768
QV + A + SGG+ + + D T II YRGK+YV+P + P + L++++
Sbjct: 218 PCKPGQVHEYAQEIARLSGGIPIQIIGDDT-----IIFYRGKDYVQPEVMSPIDTLSKKR 272
Query: 769 ALARSVELQRREGLKHHILDLQERIEL 795
AL +S Q E ++ I ++ +EL
Sbjct: 273 ALEKSKYEQSLESVRRFIAIAEKELEL 299
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 457 RRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLT 516
+++ +K + +GR G+ M W+K K+ K +E A+E+ +L+
Sbjct: 177 KKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHE-YAQEIARLS 235
Query: 517 GGT-LLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKAK 575
GG + D I+FYRG D++ P V + SK + + + E++ I + K
Sbjct: 236 GGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEK 295
>gi|356544514|ref|XP_003540695.1| PREDICTED: uncharacterized protein LOC100796393 [Glycine max]
Length = 426
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Query: 645 VQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYREL 704
V ++ P P DL T EERF L+KM YL +GRRG++ G + NMH+HWK E
Sbjct: 159 VPKAQGPVVKPDDL---TGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHET 215
Query: 705 VKIIVKGKSFAQVKQIAISLEAESGGVLVSL--DKTPKGIAIIVYRGKNYVRPLKLRPQN 762
VK+ K QV + A L SGG+ + + D T II YRGKNY +P + P +
Sbjct: 216 VKVFCKPCKPGQVHEYAQELARLSGGIPLQIIGDDT-----IIFYRGKNYEQPEVMSPID 270
Query: 763 LLTRRQALARSVELQRREGLKHHILDLQERIEL 795
L++++AL +S Q E ++ I ++ +EL
Sbjct: 271 TLSKKKALEKSKYEQSLESVRRFIAIAEKELEL 303
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++A+K + +GR G+ M W+K K+ K +E A+EL +L
Sbjct: 180 LKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVFCKPCKPGQVHE-YAQELARL 238
Query: 516 TGGT-LLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERA-----RHVASAL 569
+GG L D I+FYRG ++ P V + SK + + + E++ R +A A
Sbjct: 239 SGGIPLQIIGDDTIIFYRGKNYEQPEVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAE 298
Query: 570 IEL 572
EL
Sbjct: 299 KEL 301
>gi|326525483|dbj|BAJ88788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 7/174 (4%)
Query: 621 LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYL 680
+RY KL AKRK + + L K + P + D E +T EE+F L++ G K Y+
Sbjct: 137 IRY---KLEKAKRKEEWLIEKLRKYEAPRAPEPV-HDPEILTEEEKFYLKRTGEKKKNYV 192
Query: 681 LLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPK 740
+GRRG++ G + NMHLHWK E +K++ K QV + A L S G ++ +
Sbjct: 193 PVGRRGVFGGVVLNMHLHWKKHETMKVVCKPCRPGQVYEYAEELARLSKGTVIDIKPN-- 250
Query: 741 GIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIE 794
II YRGKNYV+P + P + L++++AL + Q E I L++ +E
Sbjct: 251 -NTIIFYRGKNYVQPKVMSPPDTLSKQKALEKYRYEQSLEHTSKFIEQLEQELE 303
>gi|5123948|emb|CAB45506.1| putative protein [Arabidopsis thaliana]
gi|7268009|emb|CAB78349.1| putative protein [Arabidopsis thaliana]
Length = 332
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 87/150 (58%), Gaps = 5/150 (3%)
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
+ KL AKRK + + L K PAE P D E++T EE+ L++ G K ++L+G
Sbjct: 135 IRYKLEKAKRKEEWLIEKLRKYDVPKSPAE-PYDPESLTEEEQHYLKRTGEKRKNFVLVG 193
Query: 684 RRGIYDGTIENMHLHWKYRELVKIIVK-GKSFAQVKQIAISLEAESGGVLVSLDKTPKGI 742
RRG++ G + N+HLHWK E VK+I K QV + A L S G+++ D P
Sbjct: 194 RRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVI--DVKPNN- 250
Query: 743 AIIVYRGKNYVRPLKLRPQNLLTRRQALAR 772
I++YRGKNYVRP + P + L++ +AL +
Sbjct: 251 TIVLYRGKNYVRPEVMSPVDTLSKDKALEK 280
>gi|326507158|dbj|BAJ95656.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 115
Score = 95.1 bits (235), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/73 (61%), Positives = 50/73 (68%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E+N LLD LGPRF DW PLPVDADLLP VVP +K P R P G++P L D E T R
Sbjct: 23 EVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEELTYLR 82
Query: 458 RLARKTPPHFALG 470
+LAR P HFALG
Sbjct: 83 KLARPLPTHFALG 95
>gi|357131757|ref|XP_003567501.1| PREDICTED: uncharacterized protein LOC100829186 [Brachypodium
distachyon]
Length = 402
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 624 LEQKLALAKRKLKMADKALAK--VQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLL 681
L+ K+ AK K M + L + V ++ P P DL EERF L+K+ Y+
Sbjct: 139 LKYKIEKAKLKEAMLIEKLKRYEVAKAEGPVAKPDDL---NGEERFYLKKVSQKKSNYVP 195
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
+GRRG++ G I NMHLHWK E VK+I K Q+++ A + SGGV +++
Sbjct: 196 IGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGVPINIVGND-- 253
Query: 742 IAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIEL 795
++ YRGK+YV+P + P + L++++AL +S Q E ++ I ++ +EL
Sbjct: 254 -TVVFYRGKDYVQPDVMSPIDTLSKKKALEKSKYEQSLETVRRFIAVSEKELEL 306
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++++K + +GR G+ M W+K K+ I + + + A E+ +L
Sbjct: 183 LKKVSQKKSNYVPIGRRGVFGGVILNMHLHWKKHETVKV-ICKPCKPGQIQEYASEIARL 241
Query: 516 TGGT-LLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKA 574
+GG + D +VFYRG D++ P V + SK + + + E++ I +
Sbjct: 242 SGGVPINIVGNDTVVFYRGKDYVQPDVMSPIDTLSKKKALEKSKYEQSLETVRRFIAVSE 301
Query: 575 K 575
K
Sbjct: 302 K 302
>gi|115442347|ref|NP_001045453.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|57900096|dbj|BAD88158.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900276|dbj|BAD87109.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|113534984|dbj|BAF07367.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|215768161|dbj|BAH00390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189771|gb|EEC72198.1| hypothetical protein OsI_05277 [Oryza sativa Indica Group]
gi|222619906|gb|EEE56038.1| hypothetical protein OsJ_04827 [Oryza sativa Japonica Group]
Length = 415
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 624 LEQKLALAKRKLKMADKALAK--VQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLL 681
L+ K+ AK K M + L K + ++ P DL+ EERF L+K+ Y+
Sbjct: 136 LKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMAKQDDLD---GEERFYLKKVSQKKSNYVP 192
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
+GRRG++ G I NMHLHWK E VK+I K Q+++ A + SGG+ ++ T
Sbjct: 193 VGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPIN---TIGN 249
Query: 742 IAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIEL 795
I+ YRGKNYV+P + P + L++++AL +S Q E ++ I ++ +EL
Sbjct: 250 DTIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSEKELEL 303
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++++K + +GR G+ M W+K K+ I + + + A E+ +L
Sbjct: 180 LKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKV-ICKPCKPGQIQEYASEIARL 238
Query: 516 TGGTLLCR-NKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKA 574
+GG + D IVFYRG +++ P V V SK + + + E++ I +
Sbjct: 239 SGGIPINTIGNDTIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSE 298
Query: 575 K 575
K
Sbjct: 299 K 299
>gi|57900098|dbj|BAD88160.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900278|dbj|BAD87111.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
Length = 394
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 624 LEQKLALAKRKLKMADKALAK--VQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLL 681
L+ K+ AK K M + L K + ++ P DL+ EERF L+K+ Y+
Sbjct: 136 LKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMAKQDDLD---GEERFYLKKVSQKKSNYVP 192
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
+GRRG++ G I NMHLHWK E VK+I K Q+++ A + SGG+ ++ T
Sbjct: 193 VGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPIN---TIGN 249
Query: 742 IAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIEL 795
I+ YRGKNYV+P + P + L++++AL +S Q E ++ I ++ +EL
Sbjct: 250 DTIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSEKELEL 303
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++++K + +GR G+ M W+K K+ I + + + A E+ +L
Sbjct: 180 LKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKV-ICKPCKPGQIQEYASEIARL 238
Query: 516 TGGTLLCR-NKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKA 574
+GG + D IVFYRG +++ P V V SK + + + E++ I +
Sbjct: 239 SGGIPINTIGNDTIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSE 298
Query: 575 K 575
K
Sbjct: 299 K 299
>gi|42566743|ref|NP_193043.2| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|51968644|dbj|BAD43014.1| putative protein [Arabidopsis thaliana]
gi|51971084|dbj|BAD44234.1| putative protein [Arabidopsis thaliana]
gi|51971893|dbj|BAD44611.1| putative protein [Arabidopsis thaliana]
gi|63003852|gb|AAY25455.1| At4g13070 [Arabidopsis thaliana]
gi|115646846|gb|ABJ17138.1| At4g13070 [Arabidopsis thaliana]
gi|332657826|gb|AEE83226.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 343
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 87/150 (58%), Gaps = 5/150 (3%)
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
+ KL AKRK + + L K PAE P D E++T EE+ L++ G K ++L+G
Sbjct: 146 IRYKLEKAKRKEEWLIEKLRKYDVPKSPAE-PYDPESLTEEEQHYLKRTGEKRKNFVLVG 204
Query: 684 RRGIYDGTIENMHLHWKYRELVKIIVK-GKSFAQVKQIAISLEAESGGVLVSLDKTPKGI 742
RRG++ G + N+HLHWK E VK+I K QV + A L S G+++ D P
Sbjct: 205 RRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVI--DVKPNN- 261
Query: 743 AIIVYRGKNYVRPLKLRPQNLLTRRQALAR 772
I++YRGKNYVRP + P + L++ +AL +
Sbjct: 262 TIVLYRGKNYVRPEVMSPVDTLSKDKALEK 291
>gi|57900097|dbj|BAD88159.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900277|dbj|BAD87110.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|215695021|dbj|BAG90212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 417
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 624 LEQKLALAKRKLKMADKALAK--VQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLL 681
L+ K+ AK K M + L K + ++ P DL+ EERF L+K+ Y+
Sbjct: 136 LKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMAKQDDLD---GEERFYLKKVSQKKSNYVP 192
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
+GRRG++ G I NMHLHWK E VK+I K Q+++ A + SGG+ ++ T
Sbjct: 193 VGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPIN---TIGN 249
Query: 742 IAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIEL 795
I+ YRGKNYV+P + P + L++++AL +S Q E ++ I ++ +EL
Sbjct: 250 DTIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSEKELEL 303
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 456 FRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKL 515
+++++K + +GR G+ M W+K K+ I + + + A E+ +L
Sbjct: 180 LKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKV-ICKPCKPGQIQEYASEIARL 238
Query: 516 TGGTLLCR-NKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEERARHVASALIELKA 574
+GG + D IVFYRG +++ P V V SK + + + E++ I +
Sbjct: 239 SGGIPINTIGNDTIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSE 298
Query: 575 K 575
K
Sbjct: 299 K 299
>gi|356511313|ref|XP_003524371.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
+ KL AKRK + L K P E D E +T EER L++ G K Y+ +G
Sbjct: 89 IRYKLEKAKRKETWLIEKLRKFDVPKPPPET-YDPEILTEEERHYLKRTGERKKHYVPVG 147
Query: 684 RRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIA 743
RRG++ G + NMHLHWK E VK+I K QV + A L S G+++ D P
Sbjct: 148 RRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLSKGIVI--DIKPNN-T 204
Query: 744 IIVYRGKNYVRPLKLRPQNLLTRRQALAR 772
II YRGKNYV+P + P N L++ +AL +
Sbjct: 205 IIFYRGKNYVKPEVMSPPNTLSKAKALEK 233
>gi|226509977|ref|NP_001151028.1| CFM6 [Zea mays]
gi|195643764|gb|ACG41350.1| CFM6 [Zea mays]
gi|238011754|gb|ACR36912.1| unknown [Zea mays]
Length = 394
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 15/179 (8%)
Query: 621 LRYLEQKLALAKRKL--KMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKP 678
L+Y +K L + +L K+ +AK Q + + ++ ++ EERF L+K+
Sbjct: 137 LKYKIEKAKLKEARLVEKLKKYEIAKAQGPM------AKVDDLSGEERFYLKKVSQKKSN 190
Query: 679 YLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSL--D 736
Y+ +GRRG++ G I NMHLHWK E VK+I K Q+++ A + SGG+ V++ D
Sbjct: 191 YVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPVNVIGD 250
Query: 737 KTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIEL 795
T I+ YRGK+YV+P + P + L++++AL +S Q E ++ I ++ +EL
Sbjct: 251 DT-----IVFYRGKSYVQPEVMSPVDTLSKKKALEKSKYEQSLETVRRFIAISEKELEL 304
>gi|357124470|ref|XP_003563923.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 337
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 621 LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYL 680
+RY KL AKRK + + L K + P + D E +T EE+F L++ G K Y+
Sbjct: 134 IRY---KLEKAKRKEEWLIEKLRKYEVPRVPEPV-HDPEILTEEEKFYLKRTGEKKKNYV 189
Query: 681 LLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPK 740
+GRRG++ G + NMHLHWK E +K++ K QV + A L S G ++ D P
Sbjct: 190 PVGRRGVFGGVVLNMHLHWKKHETMKVVCKPCRPGQVYEYAEELARLSKGTVI--DIKPN 247
Query: 741 GIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIE 794
II YRGKNYV+P + P + L++++AL + Q E I L++ +E
Sbjct: 248 N-TIIFYRGKNYVQPKVMSPPDTLSKQKALEKYRYEQSLEHTSQFIEQLEKELE 300
>gi|297790600|ref|XP_002863185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309019|gb|EFH39444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%), Gaps = 5/150 (3%)
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683
+ KL AKRK + + L K AE P D E++T EE+ L++ G K ++L+G
Sbjct: 146 IRYKLEKAKRKEEWLIEKLRKYDVPKSSAE-PYDPESLTEEEQHYLKRTGEKRKNFVLVG 204
Query: 684 RRGIYDGTIENMHLHWKYRELVKIIVK-GKSFAQVKQIAISLEAESGGVLVSLDKTPKGI 742
RRG++ G + N+HLHWK E VK+I K QV + A L S G+++ D P
Sbjct: 205 RRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVI--DVKPNN- 261
Query: 743 AIIVYRGKNYVRPLKLRPQNLLTRRQALAR 772
I++YRGKNYVRP + P + L++ +AL +
Sbjct: 262 TIVLYRGKNYVRPEVMSPVDTLSKDKALEK 291
>gi|168020023|ref|XP_001762543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686276|gb|EDQ72666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 548
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 5/150 (3%)
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQI 720
+T E+ + L+K+G K Y+ +GRRGIY GTI+NMH+HWK E V+I ++K++
Sbjct: 225 LTPEQLYALKKLGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKEM 284
Query: 721 AISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNL--LTRRQALARSVELQR 778
+LE SGG+++ + +G II++RG+NY RP P +R+AL +S Q
Sbjct: 285 GETLERLSGGIVIDIH---QGTTIIMWRGRNYKRPKVDIPIIFKNFNKRKALIKSKHEQS 341
Query: 779 REGLKHHILDLQERIELVKSELEEIEGGKT 808
LK I+ ++ + +++++ E +
Sbjct: 342 IGSLKDQIVKWEKDLRELRADMAREEAARA 371
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 43/221 (19%)
Query: 249 MIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKR 308
+ PE +L L+ + + VG GI + ++H WK E V++ + ++K
Sbjct: 225 LTPE-QLYALKKLGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKE 283
Query: 309 THEILERRTGGLVI-WRSGSSVVLFRGMAYKLPCV------------QSFTKHNHTQQTQ 355
E LER +GG+VI G++++++RG YK P V ++ K H Q
Sbjct: 284 MGETLERLSGGIVIDIHQGTTIIMWRGRNYKRPKVDIPIIFKNFNKRKALIKSKHEQSIG 343
Query: 356 DVTNEVMR-------------------------NVGEHPPRSAMESYVPDSANNLENLSK 390
+ +++++ N G PP V S ++ + ++
Sbjct: 344 SLKDQIVKWEKDLRELRADMAREEAARARWLEENPGMAPPEPPAPVSVEQSDDDSDEVTD 403
Query: 391 EELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVP 431
D+ E +D+LGP + D E D DL VP
Sbjct: 404 ISDDDITE----VDDLGPEYDDDSDWEYPDSDVDLPDRSVP 440
>gi|356560779|ref|XP_003548665.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized CRM
domain-containing protein At3g25440, chloroplastic-like
[Glycine max]
Length = 273
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 95/163 (58%), Gaps = 14/163 (8%)
Query: 618 ASLLRYLEQK---LALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGL 674
+ ++ Y+ Q+ L A++K K +AL K+ E +E D E + EE F KMGL
Sbjct: 12 SDIVTYVVQRIPSLTKAQKKKKRLCEALKKI-EPAKSSETTHDPEILXPEEHFFFLKMGL 70
Query: 675 SMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVS 734
K + +GRRGIY G I +MHLH K + +K +VK S A+VK+IA L SGG+++
Sbjct: 71 KRKNNVPVGRRGIYQGVILSMHLHXKKHQTLK-VVKTFSAAEVKEIAAELARLSGGIVLD 129
Query: 735 L--DKTPKGIAIIVYRGKNYVRPLK--LRPQNLLTRRQALARS 773
+ D T II+YRGKNY +P + P+ L+R++AL +S
Sbjct: 130 IHEDNT-----IIMYRGKNYSQPPTQIMSPRVSLSRKKALDKS 167
>gi|224128874|ref|XP_002328988.1| predicted protein [Populus trichocarpa]
gi|222839222|gb|EEE77573.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 621 LRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYL 680
+RY KL AKRK + L K++ P E D E +T EE+ L++ G K Y+
Sbjct: 143 IRY---KLEKAKRKEAWLIEKLRKLEVPKTPGE-AYDPEILTEEEKHYLKRTGEKKKNYV 198
Query: 681 LLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPK 740
+GRRG++ G + NMHLHWK E VK+ K Q+ + A L S G +++D P
Sbjct: 199 PVGRRGVFGGVVLNMHLHWKKHETVKVTCKPCKPGQIDEYAEELARLSKG--IAIDIRPD 256
Query: 741 GIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERIE 794
II YRGKNYV+P + P + L++ +AL + Q E I L++ +E
Sbjct: 257 N-TIIFYRGKNYVQPKIMSPPDTLSKDKALEKYRYEQSLEHTSQFIEKLEKELE 309
>gi|326494498|dbj|BAJ90518.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326502328|dbj|BAJ95227.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 95
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 50/73 (68%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E+N LLD LGPRF DW PLPVDADLLP VVP +K P R P G++P L D E T R
Sbjct: 23 EVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEELTYLR 82
Query: 458 RLARKTPPHFALG 470
+LAR P HFALG
Sbjct: 83 KLARPLPTHFALG 95
>gi|326506924|dbj|BAJ91503.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 118
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 49/72 (68%)
Query: 398 ELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFR 457
E+N LLD LGPRF DW PLPVDADLLP VVP +K P R P G++P L D E T R
Sbjct: 23 EVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEELTYLR 82
Query: 458 RLARKTPPHFAL 469
+LAR P HFAL
Sbjct: 83 KLARPLPTHFAL 94
>gi|357521229|ref|XP_003630903.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355524925|gb|AET05379.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 318
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 624 LEQKLALAKRKLKMADKALAKVQESLDPAELPS---DLETITNEERFLLRKMGLSMKPYL 680
+ KL AKRK + L K D +LP+ D E +T EER L++ G K Y+
Sbjct: 151 IRYKLEKAKRKETWLIEKLRK----FDVPKLPTETFDPEILTEEERHYLKRTGEKKKHYV 206
Query: 681 LLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPK 740
+GRRG++ + NMHLHWK E VK+I K Q + L S G+++ D P
Sbjct: 207 PVGRRGVFGEVVLNMHLHWKKHETVKVICKPCKPGQAHEYTEELTRPSKGIVI--DIKPN 264
Query: 741 GIAIIVYRGKNYVRPLKLRPQNLLTR 766
I II YRG+NYV+P + P + L++
Sbjct: 265 NI-IIFYRGRNYVQPKVMSPPDTLSK 289
>gi|413950005|gb|AFW82654.1| hypothetical protein ZEAMMB73_283519 [Zea mays]
Length = 645
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 584 GTLAETLAATSRWGRQPSYED------VEKMMRDSTLSRHASLLRY--LEQKLALAKRKL 635
G LA A SRW R S + VEK M T L R L +KL KL
Sbjct: 38 GLLAVGAGAYSRWRRAMSTKGRSMRSKVEKRMARETGRTQRELRRAVKLRKKLMTEDEKL 97
Query: 636 ----KMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRR 685
+ A K +A + + L ELP D E +T E+ +K+G + Y+ +G R
Sbjct: 98 IYNLRRAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVR 157
Query: 686 GIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAII 745
G++ G ++NMH+HWK+ E V++ ++K++A L SGG+++++ T II
Sbjct: 158 GVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TII 214
Query: 746 VYRGKNYVRPLKLRPQNLLTRRQAL 770
++RG+NY +P L P N LT+R+AL
Sbjct: 215 MFRGRNYRQPKNLIPFNTLTKRKAL 239
>gi|388504790|gb|AFK40461.1| unknown [Medicago truncatula]
Length = 190
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 59/92 (64%)
Query: 243 TELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPH 302
E+ + + EL RLR + + + ++ + +G+T++++ IH +W +E+VKLKF +
Sbjct: 99 NEVTVPCLEKEELSRLRTMGIHLKQKISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQL 158
Query: 303 SLQMKRTHEILERRTGGLVIWRSGSSVVLFRG 334
M H I++RRTGGLVIWRSGS + ++RG
Sbjct: 159 VQNMNLAHNIVQRRTGGLVIWRSGSVMWVYRG 190
>gi|413918581|gb|AFW58513.1| hypothetical protein ZEAMMB73_947708, partial [Zea mays]
Length = 208
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 246 AEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQ 305
AE +P EL+RL+ I +R+ +R KVG AGIT+ +V+ IHE+W+ EVVKL+ E+ ++
Sbjct: 139 AELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMN 198
Query: 306 MKRTHEILE 314
M+RTHEILE
Sbjct: 199 MRRTHEILE 207
>gi|255560940|ref|XP_002521483.1| conserved hypothetical protein [Ricinus communis]
gi|223539382|gb|EEF40973.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
LK A K +A + + L ELP D E T+E+ +K+G + Y+ +G RG++
Sbjct: 120 LKRAKKKVALLLQKLKKYELPELPPPLHDPELFTSEQLQAYKKIGFRNRNYVPVGVRGVF 179
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMHLHWK+ E V++ ++K++A L SGG+++++ II++R
Sbjct: 180 GGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINIHNVK---TIIMFR 236
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
G+NY +P L P N LT+R+AL ++ Q E K +I +++++
Sbjct: 237 GRNYRQPKNLIPINTLTKRKALFKARFEQALESQKLNIKKIEQQL 281
>gi|356513969|ref|XP_003525680.1| PREDICTED: uncharacterized protein LOC100780131 [Glycine max]
Length = 653
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
LK A K +A + + L ELP D E +T E+ +K+G K Y+ +G RG++
Sbjct: 119 LKRAKKKVALLLQKLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVF 178
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMHLHWK+ E V++ ++K++A L SGG+++++ II++R
Sbjct: 179 GGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMASMLARLSGGIVINVHNVK---TIIMFR 235
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
G+NY +P L P N LT+R+AL ++ Q E K +I +++++
Sbjct: 236 GRNYRQPKNLIPINTLTKRKALFKARFEQALESQKLNIKKIEQQL 280
>gi|297818350|ref|XP_002877058.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
gi|297322896|gb|EFH53317.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
Length = 488
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 9/165 (5%)
Query: 635 LKMADKALAKVQESL---DPAELPS---DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
LK A K +A + + L D ELPS D E T+E+ +K+G K Y+ +G RG++
Sbjct: 60 LKRAKKKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVF 119
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMH+HWK+ E V++ ++K++A + SGGV++++ II++R
Sbjct: 120 GGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVK---TIIMFR 176
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
G+NY +P L P N LT+R+AL ++ Q E K +I ++++
Sbjct: 177 GRNYRQPKNLIPVNTLTKRKALFKARFEQALESQKLNIKKTEQQL 221
>gi|15232195|ref|NP_189392.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|11994182|dbj|BAB01285.1| unnamed protein product [Arabidopsis thaliana]
gi|332643815|gb|AEE77336.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 491
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 9/165 (5%)
Query: 635 LKMADKALAKVQESL---DPAELPS---DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
LK A K +A + + L D ELPS D E T+E+ +K+G K Y+ +G RG++
Sbjct: 60 LKRAKKKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVF 119
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMH+HWK+ E V++ ++K++A + SGGV++++ II++R
Sbjct: 120 GGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVK---TIIMFR 176
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
G+NY +P L P N LT+R+AL ++ Q E K +I ++++
Sbjct: 177 GRNYRQPKNLIPVNTLTKRKALFKARFEQALESQKLNIKKTEQQL 221
>gi|356573355|ref|XP_003554827.1| PREDICTED: uncharacterized protein LOC100782246 [Glycine max]
Length = 653
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
LK A K +A + + L ELP D E +T E+ +K+G K Y+ +G RG++
Sbjct: 119 LKRAKKKVALLLQKLKKYELPELPHPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVF 178
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMHLHWK+ E V++ ++K++A L SGG+++++ II++R
Sbjct: 179 GGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMASMLARLSGGIVINVHNVK---TIIMFR 235
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
G+NY +P L P N LT+R+AL ++ Q E K +I +++++
Sbjct: 236 GRNYRQPKNLIPINTLTKRKALFKARFEQALESQKLNIKKIEQQL 280
>gi|357134703|ref|XP_003568955.1| PREDICTED: uncharacterized protein LOC100832553 [Brachypodium
distachyon]
Length = 562
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
++ A K +A + + L ELP D E +T E+ +K+G + Y+ +G RG++
Sbjct: 116 MRRAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVF 175
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMH+HWK+ E V++ ++K++A L SGG++V++ T II++R
Sbjct: 176 GGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVVNIHNTK---TIIMFR 232
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
G+NY +P L P N LT+R+AL ++ Q E K +I ++ ++
Sbjct: 233 GRNYRQPKNLIPFNTLTKRKALFKARYEQALESQKLNIKKIETQL 277
>gi|51038196|gb|AAT93999.1| unknow protein [Oryza sativa Japonica Group]
gi|222630175|gb|EEE62307.1| hypothetical protein OsJ_17096 [Oryza sativa Japonica Group]
Length = 560
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
L+ A K +A + + L ELP D E +T E+ +K+G + Y+ +G RG++
Sbjct: 112 LRRAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVF 171
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMH+HWK+ E V++ ++K++A L SGG+++++ T II++R
Sbjct: 172 GGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TIIMFR 228
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
G+NY +P L P N LT+R+AL ++ Q E K +I ++ ++
Sbjct: 229 GRNYRQPKNLIPLNTLTKRKALFKARFEQALESQKLNIKKIETQL 273
>gi|449483922|ref|XP_004156733.1| PREDICTED: uncharacterized protein LOC101226279 [Cucumis sativus]
Length = 619
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
LK A K +A + + L ELP D E +T E+ +K+G + Y+ +G RG++
Sbjct: 117 LKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVF 176
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMHLHWK+ E V++ ++K++A L SGG++V++ II++R
Sbjct: 177 GGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVK---TIIMFR 233
Query: 749 GKNYVRPLKLRPQNLLTRRQALARS 773
G+NY +P L P N LT+R+AL ++
Sbjct: 234 GRNYRQPKNLIPINTLTKRKALFKA 258
>gi|449450187|ref|XP_004142845.1| PREDICTED: uncharacterized protein LOC101215761 [Cucumis sativus]
Length = 619
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
LK A K +A + + L ELP D E +T E+ +K+G + Y+ +G RG++
Sbjct: 117 LKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVF 176
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMHLHWK+ E V++ ++K++A L SGG++V++ II++R
Sbjct: 177 GGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVK---TIIMFR 233
Query: 749 GKNYVRPLKLRPQNLLTRRQALARS 773
G+NY +P L P N LT+R+AL ++
Sbjct: 234 GRNYRQPKNLIPINTLTKRKALFKA 258
>gi|125550822|gb|EAY96531.1| hypothetical protein OsI_18436 [Oryza sativa Indica Group]
Length = 560
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
L+ A K +A + + L ELP D E +T E+ +K+G + Y+ +G RG++
Sbjct: 112 LRRAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVF 171
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMH+HWK+ E V++ ++K++A L SGG+++++ T II++R
Sbjct: 172 GGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TIIMFR 228
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
G+NY +P L P N LT+R+AL ++ Q E K +I ++ ++
Sbjct: 229 GRNYRQPKNLIPLNTLTKRKALFKARFEQALESQKLNIKKIETQL 273
>gi|413917671|gb|AFW57603.1| hypothetical protein ZEAMMB73_144408 [Zea mays]
Length = 520
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 21/229 (9%)
Query: 583 AGTLAETLAATSRWGRQPSYED------VEKMMRDSTLSRHASLLRY--LEQKLALAKRK 634
AG LA A W R S + VEK M T L R L +KL K
Sbjct: 40 AGLLAVRPRAEGGWRRAMSTKGRTMRTKVEKRMARETGRTQRELRRAVKLRKKLMTEDEK 99
Query: 635 ----LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGR 684
L+ A K +A + + L ELP D E +T E+ +K+G + Y+ +G
Sbjct: 100 FIYNLRRAKKKVALLLQKLKKYELPDLQAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGV 159
Query: 685 RGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAI 744
RG++ G ++NMH+HWK+ E V++ ++K++A L SGG+++++ T I
Sbjct: 160 RGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TI 216
Query: 745 IVYRGKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
I++RG+NY +P L P N LT+R+AL ++ Q E K +I ++ ++
Sbjct: 217 IMFRGRNYRQPKNLIPFNTLTKRKALFKARFEQALESQKLNIKKIETQL 265
>gi|242086871|ref|XP_002439268.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
gi|241944553|gb|EES17698.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
Length = 652
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 578 VGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY--LEQKLALAKRKL 635
VG+ G ++ R R VEK M T L R L +KL KL
Sbjct: 43 VGAGADGAWRRAMSTKGRSMRSK----VEKRMARETGRTQRELRRAVKLRKKLMTEDEKL 98
Query: 636 ----KMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRR 685
+ A K +A + + L ELP D E +T E+ +K+G + Y+ +G R
Sbjct: 99 IYNLRRAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVR 158
Query: 686 GIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAII 745
G++ G ++NMH+HWK+ E V++ ++K++A L SGG+++++ T II
Sbjct: 159 GVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TII 215
Query: 746 VYRGKNYVRPLKLRPQNLLTRRQAL 770
++RG+NY +P L P N LT+R+AL
Sbjct: 216 MFRGRNYRQPKNLIPFNTLTKRKAL 240
>gi|359488800|ref|XP_002272412.2| PREDICTED: uncharacterized protein LOC100254349 [Vitis vinifera]
Length = 666
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
L+ A K +A + + L ELP D E +T E+ +K+G K Y+ +G RG++
Sbjct: 102 LRRAKKKVALLLQKLKKYELPELPAPRHDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVF 161
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMHLHWK+ E V++ ++K++A L SGG+++++ II++R
Sbjct: 162 GGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINVHDVK---TIIMFR 218
Query: 749 GKNYVRPLKLRPQNLLTRRQALARS 773
G+NY +P L P N LT+R+AL ++
Sbjct: 219 GRNYRQPKNLIPINTLTKRKALFKA 243
>gi|296087592|emb|CBI34848.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 635 LKMADKALAKVQESLDPAELPS------DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
L+ A K +A + + L ELP D E +T E+ +K+G K Y+ +G RG++
Sbjct: 117 LRRAKKKVALLLQKLKKYELPELPAPRHDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVF 176
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMHLHWK+ E V++ ++K++A L SGG+++++ II++R
Sbjct: 177 GGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINVHDVK---TIIMFR 233
Query: 749 GKNYVRPLKLRPQNLLTRRQALA 771
G+NY +P L P N LT+R+A A
Sbjct: 234 GRNYRQPKNLIPINTLTKRKATA 256
>gi|224055583|ref|XP_002298551.1| predicted protein [Populus trichocarpa]
gi|222845809|gb|EEE83356.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 96/165 (58%), Gaps = 9/165 (5%)
Query: 635 LKMADKALAKVQESL---DPAELPS---DLETITNEERFLLRKMGLSMKPYLLLGRRGIY 688
LK A K +A + + L D ELPS D E +T E+ +K+G K Y+ +G RG++
Sbjct: 49 LKRAKKKVALLLQKLKKYDLPELPSPLHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVF 108
Query: 689 DGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYR 748
G ++NMH+HWK+ E V++ ++K++A + SGG++V++ II++R
Sbjct: 109 GGVVQNMHMHWKFHETVQVSCDNFPKEKIKEMATMIARLSGGIVVNVHNVK---TIIMFR 165
Query: 749 GKNYVRPLKLRPQNLLTRRQALARSVELQRREGLKHHILDLQERI 793
G+NY +P L P N LT+R+AL ++ Q E K +I +++++
Sbjct: 166 GRNYRQPKDLIPLNTLTKRKALFKARFEQALESQKLNIKQIEQQL 210
>gi|168040806|ref|XP_001772884.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675795|gb|EDQ62286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 463
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 198 PIELSKDRHREVGSLNQKQI--KGYHEVDDPSVLPWKRNTDRRRRSNTELAEKMIPEHEL 255
P+ SK + RE S N I KG V P P + + RS E+ + E+
Sbjct: 38 PLAKSKKKPREFDSFNPPPIGRKGVKPVQAPGPYPEGQGP-KLGRSREEILGAPLTSAEV 96
Query: 256 QRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILER 315
+ L + + + +G G+T +++ +HE WK V K+K + ++ M +LE
Sbjct: 97 RELVTKARKEPRQINLGRDGLTHNMLNLVHEHWKRRRVCKVKCKGVPTVDMDNVCRVLEE 156
Query: 316 RTGGLVIWRSGSSVVLFRGMAY 337
+TGG +I R G +V LFRG Y
Sbjct: 157 KTGGKIILRQGGAVYLFRGRNY 178
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + +H HWK R + K+ KG + + LE ++GG ++ +G
Sbjct: 112 LGRDGLTHNMLNLVHEHWKRRRVCKVKCKGVPTVDMDNVCRVLEEKTGGKIILR----QG 167
Query: 742 IAIIVYRGKNY 752
A+ ++RG+NY
Sbjct: 168 GAVYLFRGRNY 178
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQI 720
+T EE LRK+G + P LG+ G+Y + ++ +K +LVK+ K + + K+I
Sbjct: 209 LTIEEANNLRKLGRELPPVCHLGKNGVYVNLVRDVRNAFKVDDLVKVDCKNMNPSDYKKI 268
Query: 721 AISLEAESGGVLVSLDKTPKGIAIIVYRG 749
L+ VL+S ++ +I+++RG
Sbjct: 269 GAKLKDLVPCVLLSFERE----SILMWRG 293
>gi|224113759|ref|XP_002332503.1| predicted protein [Populus trichocarpa]
gi|222832483|gb|EEE70960.1| predicted protein [Populus trichocarpa]
Length = 699
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 198 PIELSKDRHREVGS--LNQKQIKGYHEVDDPS-VLPWKRNTDRRRRSNTELAEKMIPEHE 254
P+ SK + RE S L KG V P LP R ++ E+ + + E
Sbjct: 195 PLPPSKKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGA--GPRYAKTREEILGDPLTQEE 252
Query: 255 LQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILE 314
+Q L + L+ + +G G+T ++D+IH WK V K+K + ++ M + LE
Sbjct: 253 IQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLE 312
Query: 315 RRTGGLVIWRSGSSVVLFRGMAY 337
RTGG +I+R G + LFRG Y
Sbjct: 313 ERTGGKIIYRKGGVLYLFRGRNY 335
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
+ +T EE L L K L +GR G+ ++N+H HWK R + KI KG +
Sbjct: 246 DPLTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 305
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +GG ++ KG + ++RG+NY
Sbjct: 306 NVCQQLEERTGGKIIYR----KGGVLYLFRGRNY 335
>gi|297604874|ref|NP_001056251.2| Os05g0551900 [Oryza sativa Japonica Group]
gi|255676553|dbj|BAF18165.2| Os05g0551900, partial [Oryza sativa Japonica Group]
Length = 73
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 470 GRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLT 516
GRNR QGLA A+VKLWEKS + KIA+KR + NT N+ M+EE+K T
Sbjct: 1 GRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKVWT 47
>gi|302766798|ref|XP_002966819.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
gi|300164810|gb|EFJ31418.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
Length = 672
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 10/107 (9%)
Query: 671 KMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKI-IVKGKSFAQVKQIAISLEAESG 729
++G + + +G+RGIY G I N+H +WK+ E V+I + S + ++I L SG
Sbjct: 135 RIGNKNQNFASVGKRGIYGGVIHNIHTNWKFHETVRIKCPRHNSMEETRRIGAELARLSG 194
Query: 730 GVLVSL--DKTPKGIAIIVYRGKNYVRPLKLRPQNL--LTRRQALAR 772
G+++ + D+T +I++RGKNY P +L P L + RR A +R
Sbjct: 195 GIVLDVLEDRT-----VIMFRGKNYQTPEELYPPTLEAVDRRNADSR 236
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 235 TDRRRRSNTELAE--------KMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHE 286
T+ RR+ ++ L E + + E E I + VG GI ++ +IH
Sbjct: 102 TEIRRKHSSHLTEGKRCLRETEPLSEGEAAHYARIGNKNQNFASVGKRGIYGGVIHNIHT 161
Query: 287 KWKLDEVVKLKFEEPHSL-QMKRTHEILERRTGGLVI-WRSGSSVVLFRGMAYKLP 340
WK E V++K +S+ + +R L R +GG+V+ +V++FRG Y+ P
Sbjct: 162 NWKFHETVRIKCPRHNSMEETRRIGAELARLSGGIVLDVLEDRTVIMFRGKNYQTP 217
>gi|242082009|ref|XP_002445773.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
gi|241942123|gb|EES15268.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
Length = 674
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE F L K L K L +GR G+ +EN+H HWK + + KI KG +
Sbjct: 183 EPLTKEEVFELVKGSLKTKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
I LE + GG ++ +G I ++RG+NY
Sbjct: 243 NICQQLEEKVGGKVIHR----QGGVIFLFRGRNY 272
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
L E + E E+ L SL+ + +G G+T ++++IH WK V K+K + ++
Sbjct: 181 LGEPLTKE-EVFELVKGSLKTKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTV 239
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKL---PC 341
M + LE + GG VI R G + LFRG Y PC
Sbjct: 240 DMDNICQQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPC 279
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 428 PVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWE 487
PV P Y + +P G+ P E TE R R+ PP LG+N L K + + +E
Sbjct: 287 PVAPVYPRLVTKVPGGLTPD----EATEMRARGRQLPPICKLGKNGVYANLVKQVREAFE 342
Query: 488 KSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDF---LPPVVTDA 544
+ ++ + + ++ +LK L LL ++I+ +RG+D+ LPP+ ++
Sbjct: 343 ACDLVRVDCS-GLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLPPLEENS 401
Query: 545 VKERSKLTDIRQDEE--ERARHVASALIELK 573
E +K+ + +E E+ H + L +++
Sbjct: 402 F-EVAKVQESLSGKESNEKVTHSGNVLTQIE 431
>gi|297738777|emb|CBI28022.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
R RS E+ + + E E++ L ++ + +G G+T ++D+IH WK V K+
Sbjct: 231 RYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKI 290
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
K + ++ M + LE +TGG VI+ G + LFRG Y
Sbjct: 291 KCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNY 331
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L + + K L +GR G+ ++N+H HWK R + KI KG +
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 301
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE ++GG ++ KG + ++RG+NY
Sbjct: 302 NVRQQLEEKTGGKVI----YGKGGVLFLFRGRNY 331
>gi|225445140|ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
Length = 752
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 237 RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKL 296
R RS E+ + + E E++ L ++ + +G G+T ++D+IH WK V K+
Sbjct: 231 RYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKI 290
Query: 297 KFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
K + ++ M + LE +TGG VI+ G + LFRG Y
Sbjct: 291 KCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNY 331
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L + + K L +GR G+ ++N+H HWK R + KI KG +
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 301
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE ++GG ++ KG + ++RG+NY
Sbjct: 302 NVRQQLEEKTGGKVI----YGKGGVLFLFRGRNY 331
>gi|302759655|ref|XP_002963250.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
gi|300168518|gb|EFJ35121.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
Length = 274
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 99/182 (54%), Gaps = 12/182 (6%)
Query: 622 RYLEQKLALAKRKLKMADKALAKV-------QESLDPAELP-SDLETITNEERFLLRKMG 673
++L + +A A+ +M K ++ QE P + P D E ++ E L++
Sbjct: 53 KFLSEDVATAENLREMLKKTYERIELKKKILQEYDFPEDKPVHDPEYLSPEFMTALKERN 112
Query: 674 LSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLV 733
+ +L +G+RG+++G I +++ HW E ++I +G +++ +A + SG V++
Sbjct: 113 RCIDDFLTIGKRGVWEGFIRDIYSHWINHETLRIYCEGYPLRKLRPMAEKVARMSGAVVI 172
Query: 734 SLDKTPKGIAIIVYRGKNYVRPLK--LRPQNLLTRRQALARSVELQRREGLKHHILDLQE 791
++ T + ++ I+YRG+N+ + R +N+L + +AL +++ L+ + L ++ +L E
Sbjct: 173 AV--TEETMSFILYRGRNFSHGYQPPSRIENMLNKGKALKKALLLKSLQHLYRNVRELTE 230
Query: 792 RI 793
RI
Sbjct: 231 RI 232
>gi|255589857|ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
gi|223524018|gb|EEF27274.1| conserved hypothetical protein [Ricinus communis]
Length = 748
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 198 PIELSKDRHREVGS--LNQKQIKGYHEVDDPS-VLPWKRNTDRRRRSNTELAEKMIPEHE 254
P+ SK + RE S L KG V P LP R S E+ + + E
Sbjct: 199 PLPPSKKKLREFDSFKLPPPDKKGVKPVQKPGPFLPGA--GPRYVYSREEILGEPLTTEE 256
Query: 255 LQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILE 314
++ L L+ + +G G+T ++D+IH WK V K+K ++ M + LE
Sbjct: 257 VKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLE 316
Query: 315 RRTGGLVIWRSGSSVVLFRGMAY 337
RTGG VI+R G V LFRG Y
Sbjct: 317 ERTGGKVIYRKGGVVYLFRGRNY 339
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE +L + L + L +GR G+ ++N+H HWK R + KI G +
Sbjct: 250 EPLTTEEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMD 309
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +GG ++ KG + ++RG+NY
Sbjct: 310 NVCQQLEERTGGKVIYR----KGGVVYLFRGRNY 339
>gi|356527769|ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 723
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 198 PIELSKDRHREVGS--LNQKQIKGYHEVDDPSVLPWKRNTDRRR-RSNTELAEKMIPEHE 254
P+ SK + +E S L KG V P P+ T R +S E+ + + + E
Sbjct: 148 PLPASKKKLKEFDSFVLPPPHKKGVKPVQSPG--PYLAGTGPRYVKSREEILGEPLTQEE 205
Query: 255 LQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILE 314
++ L ++ + +G G+T ++D+IH WK K++ + ++ M LE
Sbjct: 206 IRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRACKIRCKGVCTVDMDNVCHQLE 265
Query: 315 RRTGGLVIWRSGSSVVLFRGMAY 337
RTGG +I R G + LFRG Y
Sbjct: 266 ERTGGKIIHRKGGVLYLFRGRNY 288
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L K + + L +GR G+ ++N+H HWK R KI KG +
Sbjct: 199 EPLTQEEIRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRACKIRCKGVCTVDMD 258
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +GG ++ KG + ++RG+NY
Sbjct: 259 NVCHQLEERTGGKIIHR----KGGVLYLFRGRNY 288
>gi|147799432|emb|CAN76866.1| hypothetical protein VITISV_012308 [Vitis vinifera]
Length = 393
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 240 RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFE 299
RS E+ + + E E++ L ++ + +G G+T ++D+IH WK V K+K +
Sbjct: 234 RSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCK 293
Query: 300 EPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
++ M + LE +TGG VI+ G + LFRG Y
Sbjct: 294 GVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNY 331
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L + + K L +GR G+ ++N+H HWK R + KI KG +
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 301
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE ++GG ++ KG + ++RG+NY
Sbjct: 302 NVRQQLEEKTGGKVIYG----KGGVLFLFRGRNY 331
>gi|18399222|ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis thaliana]
gi|20197570|gb|AAD24394.2| expressed protein [Arabidopsis thaliana]
gi|28393847|gb|AAO42331.1| unknown protein [Arabidopsis thaliana]
gi|330251862|gb|AEC06956.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 701
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 198 PIELSKDRHREVGSLNQKQI--KGYHEVDDPSVLPWKRNTDRRR-RSNTELAEKMIPEHE 254
P+ S+ RE S + KG V P P++ R S E+ + + + E
Sbjct: 190 PLPQSQKTPREFDSFRLPPVGKKGLKPVQKPG--PFRPGVGPRYVYSKEEILGEPLTKEE 247
Query: 255 LQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILE 314
++ L L+ + +G G+T ++++IH+ WK V K+K + ++ M E LE
Sbjct: 248 VRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLE 307
Query: 315 RRTGGLVIWRSGSSVVLFRGMAY 337
+ GG VI+R G + LFRG Y
Sbjct: 308 EKIGGKVIYRRGGVLFLFRGRNY 330
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L L L +GR G+ + N+H WK R + KI KG +
Sbjct: 241 EPLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMD 300
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE + GG ++ +G + ++RG+NY
Sbjct: 301 NVCEQLEEKIGGKVIYR----RGGVLFLFRGRNY 330
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T +E +R+ G + P LG+ G+Y ++N+ ++ ELV+I +G + +
Sbjct: 359 EGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFR 418
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+I L+ VLVS + I+++RG+ +
Sbjct: 419 KIGAKLKDLVPCVLVSFENE----QILIWRGREW 448
>gi|159469243|ref|XP_001692777.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278030|gb|EDP03796.1| predicted protein [Chlamydomonas reinhardtii]
Length = 321
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 270 KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEI---LERRTGGLVIWRSG 326
++G +G+ +++ S+ W+ E+VKL+ + M ++ LE+RTGGLV+WR+G
Sbjct: 140 RLGPSGLNASVLTSVASAWRNSELVKLRIVSRANKYMPYITQVCAALEQRTGGLVVWRAG 199
Query: 327 SSVVLFRGMAY 337
S+ LFRG Y
Sbjct: 200 GSIWLFRGAGY 210
>gi|297836246|ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
gi|297331845|gb|EFH62264.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
Length = 700
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%)
Query: 244 ELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHS 303
E+ + + + E++ L L+ + +G G+T ++++IH+ WK V K+K + +
Sbjct: 237 EILGEPLTKEEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCT 296
Query: 304 LQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
+ M + E LE + GG VI+R G + LFRG Y
Sbjct: 297 VDMDKVCEQLEEKIGGKVIYRRGGVLFLFRGRNY 330
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L L L +GR G+ + N+H WK R + KI KG +
Sbjct: 241 EPLTKEEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMD 300
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
++ LE + GG ++ +G + ++RG+NY
Sbjct: 301 KVCEQLEEKIGGKVIYR----RGGVLFLFRGRNY 330
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T +E +R+ G + P LG+ G+Y ++N+ ++ ELV+I +G + +
Sbjct: 359 EGLTLQEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFR 418
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+I L+ VL+S + I+++RG+ +
Sbjct: 419 KIGAKLKDLVPCVLISFENE----QILIWRGREW 448
>gi|357520913|ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
gi|355524767|gb|AET05221.1| CRS2-associated factor [Medicago truncatula]
Length = 698
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 198 PIELSKDRHREVGS--LNQKQIKGYHEVDDPS-VLPWKRNTDRRRRSNTELAEKMIPEHE 254
P+ SK + +E S L KG V P LP + R S E+ + + + E
Sbjct: 119 PLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGPFLPG--TSPRYVMSREEVLGEPLTKEE 176
Query: 255 LQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILE 314
+ L +L+ + +G G ++D+IH WK V K+K ++ M + LE
Sbjct: 177 INELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLE 236
Query: 315 RRTGGLVIWRSGSSVVLFRGMAY 337
+TGG VI+R G + LFRG Y
Sbjct: 237 EKTGGKVIYRRGGVIYLFRGRNY 259
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L + L L LGR G ++N+H HWK R + KI G +
Sbjct: 170 EPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMD 229
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE ++GG ++ +G I ++RG+NY
Sbjct: 230 NVCQQLEEKTGGKVIYR----RGGVIYLFRGRNY 259
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE +R+ G ++ P LG+ G+Y + N+ ++ ELV++ +G + + +
Sbjct: 288 EGLTLEEATEMRQKGRTLTPICKLGKNGVYYNLVNNVREAFEECELVRVNCQGLNKSDYR 347
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+I L L+S + I+++RG+N+
Sbjct: 348 KIGAKLRDLVPCTLLSYENE----HILMWRGRNW 377
>gi|357132246|ref|XP_003567742.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like
[Brachypodium distachyon]
Length = 702
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 218 KGYHEVDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGIT 277
KG V P + +S E+ + + + E+ L +L+ + +G G+T
Sbjct: 151 KGVKPVQSPGPFLAGMEPRYQAQSREEVLGEPLSKEEVAELVKGNLKAKRQLNIGRDGLT 210
Query: 278 QALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
++++IH WK V K+K + ++ M + LE R GG VI R G V LFRG Y
Sbjct: 211 HNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCQQLEERVGGKVIHRQGGVVFLFRGRNY 270
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E ++ EE L K L K L +GR G+ +EN+H HWK + + KI KG +
Sbjct: 181 EPLSKEEVAELVKGNLKAKRQLNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMD 240
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE GG ++ +G + ++RG+NY
Sbjct: 241 NVCQQLEERVGGKVIHR----QGGVVFLFRGRNY 270
>gi|162462028|ref|NP_001105220.1| CRS2-associated factor 1, chloroplastic precursor [Zea mays]
gi|75147312|sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|30349367|gb|AAP22135.1| CRS2-associated factor 1 [Zea mays]
Length = 674
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L K L K L +GR G+ +EN+H HWK + + KI KG +
Sbjct: 183 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMD 242
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
I LE + GG ++ +G I ++RG+NY
Sbjct: 243 NICHQLEEKVGGKVIHR----QGGVIFLFRGRNY 272
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
L E + E E+ L SL+ + +G G+T ++++IH WK V K+K + ++
Sbjct: 181 LGEPLTKE-EVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTI 239
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKL---PC 341
M LE + GG VI R G + LFRG Y PC
Sbjct: 240 DMDNICHQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPC 279
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 428 PVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWE 487
PV P Y + +P G+ P E TE R + PP LG+N L + + +E
Sbjct: 287 PVAPVYPRLVTKVPGGLTPD----EATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFE 342
Query: 488 KSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDF---LPPVVTDA 544
+ ++ + + ++ +LK L LL ++I+ +RG+D+ LPP+
Sbjct: 343 ACDLVRVDCS-GLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLPPLENSY 401
Query: 545 VKERSKLTDIRQDEEERARHVASALIELK 573
+ + + ++ E+ H + L +++
Sbjct: 402 EVTKVQESFSGKESNEKVTHSGNVLAQIE 430
>gi|125602364|gb|EAZ41689.1| hypothetical protein OsJ_26223 [Oryza sativa Japonica Group]
Length = 615
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 264 RMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIW 323
R ++ +G G+T +++ IH WK DE V++K ++ M+ LE +TGGL+I
Sbjct: 149 RTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIH 208
Query: 324 RSGSSVVLFRGMAY 337
R G ++L+RG Y
Sbjct: 209 RHGGQLILYRGRHY 222
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 272 GSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVL 331
G G+T +++ IH WK DE V++K ++ M+ LE +TGGL+I R G ++L
Sbjct: 368 GRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLIL 427
Query: 332 FRGMAY 337
+RG Y
Sbjct: 428 YRGRHY 433
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 659 ETITNEER-FLLRKMGLS-MKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ 716
E +T ER FL+ K S K + LGR G+ + ++H HWK E V++ G
Sbjct: 131 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 190
Query: 717 VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
++ + LE ++GG+++ G +I+YRG++Y
Sbjct: 191 MQNVCHQLEDKTGGLIIHR----HGGQLILYRGRHY 222
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
L K E + P + + +E +T EE +RK GL + L + G Y + + +
Sbjct: 234 LWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLT 293
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
ELV+I KG + ++I + L ++VS DK IIV+RGK+Y ++ Q
Sbjct: 294 DELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKE----QIIVWRGKDYNGTIQDNTQ 349
Query: 762 --NLLTRRQALARSVELQRREGLKHHILD 788
++ + A + R+GL H++L+
Sbjct: 350 KTSVSVLEEESAGAESENGRDGLTHNMLN 378
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
L K E + P + + +E +T EE +RK GL + L + G Y + + +
Sbjct: 445 LWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLT 504
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
ELV+I KG + ++I + L ++VS DK IIV+RGK+Y
Sbjct: 505 DELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKE----QIIVWRGKDY 551
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 683 GRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGI 742
GR G+ + ++H HWK E V++ G ++ + LE ++GG+++ G
Sbjct: 368 GRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHR----HGG 423
Query: 743 AIIVYRGKNY 752
+I+YRG++Y
Sbjct: 424 QLILYRGRHY 433
>gi|115475027|ref|NP_001061110.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|75133775|sp|Q6Z4U2.1|CAF1M_ORYSJ RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|40253285|dbj|BAD05220.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|40253602|dbj|BAD05547.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113623079|dbj|BAF23024.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|125560323|gb|EAZ05771.1| hypothetical protein OsI_28005 [Oryza sativa Indica Group]
Length = 428
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 264 RMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIW 323
R ++ +G G+T +++ IH WK DE V++K ++ M+ LE +TGGL+I
Sbjct: 173 RTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIH 232
Query: 324 RSGSSVVLFRGMAY 337
R G ++L+RG Y
Sbjct: 233 RHGGQLILYRGRHY 246
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 659 ETITNEER-FLLRKMGLS-MKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ 716
E +T ER FL+ K S K + LGR G+ + ++H HWK E V++ G
Sbjct: 155 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 214
Query: 717 VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
++ + LE ++GG+++ G +I+YRG++Y
Sbjct: 215 MQNVCHQLEDKTGGLIIHR----HGGQLILYRGRHY 246
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
L K E + P + + +E +T EE +RK GL + L + G Y + + +
Sbjct: 258 LWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLT 317
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
ELV+I KG + ++I + L ++VS DK IIV+RGK+Y
Sbjct: 318 DELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKE----QIIVWRGKDY 364
>gi|194688996|gb|ACF78582.1| unknown [Zea mays]
gi|194700546|gb|ACF84357.1| unknown [Zea mays]
gi|223974875|gb|ACN31625.1| unknown [Zea mays]
Length = 560
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L K L K L +GR G+ +EN+H HWK + + KI KG +
Sbjct: 69 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMD 128
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
I LE + GG ++ +G I ++RG+NY
Sbjct: 129 NICHQLEEKVGGKVIHR----QGGVIFLFRGRNY 158
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
L E + E E+ L SL+ + +G G+T ++++IH WK V K+K + ++
Sbjct: 67 LGEPLTKE-EVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTI 125
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKL---PC 341
M LE + GG VI R G + LFRG Y PC
Sbjct: 126 DMDNICHQLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPC 165
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 425 LLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVK 484
L PV P Y + +P G+ P E TE R + PP LG+N L + +
Sbjct: 170 LWKPVAPVYPRLVTKVPGGLTPD----EATEMRTRGHQLPPICKLGKNGVYANLVNQVRE 225
Query: 485 LWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDF---LPPVV 541
+E + ++ + + ++ +LK L LL ++I+ +RG+D+ LPP+
Sbjct: 226 AFEACDLVRVDCS-GLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLPPLE 284
Query: 542 TDAVKERSKLTDIRQDEEERARHVASALIELK 573
+ + + ++ E+ H + L +++
Sbjct: 285 NSYEVTKVQESFSGKESNEKVTHSGNVLAQIE 316
>gi|218188278|gb|EEC70705.1| hypothetical protein OsI_02075 [Oryza sativa Indica Group]
Length = 701
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L K L K L +GR G+ +EN+H HWK + + KI KG +
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY---VRPL 756
+ LE + GG ++ +G I ++RG+NY RP+
Sbjct: 243 NVCQQLEEKVGGKVIHH----QGGVIFLFRGRNYNYRTRPI 279
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 218 KGYHEVDDPSVLPWKRNTDRRRR--SNTELAEKMIPEHELQRLRNISLRMLERTKVGSAG 275
KG V P P+ T+ R + S E+ + + + E+ L +L+ + +G G
Sbjct: 153 KGVKPVQSPG--PFLAGTEPRYQAASREEVLGEPLTKEEVDELVKATLKTKRQLNIGRDG 210
Query: 276 ITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGM 335
+T ++++IH WK V K+K + ++ M + LE + GG VI G + LFRG
Sbjct: 211 LTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKVGGKVIHHQGGVIFLFRGR 270
Query: 336 AY 337
Y
Sbjct: 271 NY 272
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 428 PVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWE 487
P P Y ++ +P G+ P E + R+ R+ PP LG+N L K + + +E
Sbjct: 287 PAAPVYPRLVKKIPDGLTPD----EAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFE 342
Query: 488 KSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDF---LPPV 540
+ ++ + + ++ +LK L TLL ++I+ +RGND+ LPP+
Sbjct: 343 ACDLVRVDCS-GLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGNDWKSSLPPL 397
>gi|115436730|ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|75109409|sp|Q5VMQ5.1|CAF1P_ORYSJ RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|55297418|dbj|BAD69270.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|55297612|dbj|BAD68987.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113532653|dbj|BAF05036.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|215694476|dbj|BAG89423.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618506|gb|EEE54638.1| hypothetical protein OsJ_01906 [Oryza sativa Japonica Group]
Length = 701
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L K L K L +GR G+ +EN+H HWK + + KI KG +
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY---VRPL 756
+ LE + GG ++ +G I ++RG+NY RP+
Sbjct: 243 NVCQQLEEKVGGKVIHH----QGGVIFLFRGRNYNYRTRPI 279
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 218 KGYHEVDDPSVLPWKRNTDRRRR--SNTELAEKMIPEHELQRLRNISLRMLERTKVGSAG 275
KG V P P+ T+ R + S E+ + + + E+ L +L+ + +G G
Sbjct: 153 KGVKPVQSPG--PFLAGTEPRYQAASREEVLGEPLTKEEVDELVKATLKTKRQLNIGRDG 210
Query: 276 ITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGM 335
+T ++++IH WK V K+K + ++ M + LE + GG VI G + LFRG
Sbjct: 211 LTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKVGGKVIHHQGGVIFLFRGR 270
Query: 336 AY 337
Y
Sbjct: 271 NY 272
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 428 PVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWE 487
P P Y ++ +P G+ P E + R+ R+ PP LG+N L K + + +E
Sbjct: 287 PAAPVYPRLVKKIPDGLTPD----EAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFE 342
Query: 488 KSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDF---LPPV 540
+ ++ + + ++ +LK L TLL ++I+ +RGND+ LPP+
Sbjct: 343 ACDLVRVDCS-GLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGNDWKSSLPPL 397
>gi|168045030|ref|XP_001774982.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673729|gb|EDQ60248.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G T ++ S+H+ WK +VV++K + ++ M +LE +TGG +I R+G V
Sbjct: 112 LGRDGFTHNMLASVHDYWKRRQVVRIKCKGVPTVDMDNVCTVLEDKTGGKIISRAGGVVY 171
Query: 331 LFRGMAY 337
LFRG Y
Sbjct: 172 LFRGRNY 178
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 680 LLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTP 739
L LGR G + ++H +WK R++V+I KG + + LE ++GG ++S
Sbjct: 110 LNLGRDGFTHNMLASVHDYWKRRQVVRIKCKGVPTVDMDNVCTVLEDKTGGKIISR---- 165
Query: 740 KGIAIIVYRGKNY 752
G + ++RG+NY
Sbjct: 166 AGGVVYLFRGRNY 178
>gi|388514061|gb|AFK45092.1| unknown [Lotus japonicus]
Length = 161
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 654 LPSDLETITNEERFLLRKMGLSMK--PYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKG 711
LPS ++N ER LLRK L MK P L +G+ G + + H++ L + VKG
Sbjct: 26 LPSRSVFLSNRERLLLRKQALQMKKRPVLAIGKSNTVSGIAKAIKTHFQKHSLAIVNVKG 85
Query: 712 KS-FAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRG 749
++ V+++ LE +G VLVS + + +I+YRG
Sbjct: 86 RAKGTSVQEVVFKLEQATGAVLVSQEPS----KVILYRG 120
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 459 LARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGG 518
L K P A+G++ + G+AKA+ ++K ++A + +K T + + +L++ TG
Sbjct: 46 LQMKKRPVLAIGKSNTVSGIAKAIKTHFQKHSLAIVNVKGRAKGTSVQEVVFKLEQATGA 105
Query: 519 TLLCRNKDYIVFYRG 533
L+ + ++ YRG
Sbjct: 106 VLVSQEPSKVILYRG 120
>gi|357144801|ref|XP_003573418.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like
[Brachypodium distachyon]
Length = 437
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 264 RMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIW 323
R + +G G+T +++ IH WK E V++K ++ M+ LE +TGGL+I
Sbjct: 174 RTKRQVNLGRDGLTHNMLNDIHNHWKHGEAVRVKCLGVPTVDMQNVCHELEDKTGGLIIH 233
Query: 324 RSGSSVVLFRGMAY 337
R G ++L+RG Y
Sbjct: 234 RHGGQLILYRGRHY 247
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + ++H HWK+ E V++ G ++ + LE ++GG+++ G
Sbjct: 181 LGRDGLTHNMLNDIHNHWKHGEAVRVKCLGVPTVDMQNVCHELEDKTGGLIIHR----HG 236
Query: 742 IAIIVYRGKNY 752
+I+YRG++Y
Sbjct: 237 GQLILYRGRHY 247
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
L K E + P + + +E +T E +RK GL + L + G Y + + +
Sbjct: 259 LWKPAEPIYPRLIKTTIEGLTVVETKAMRKKGLHVPVLTKLAKNGYYASLVPMVRDAFLT 318
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
ELV+I KG + ++I + L +LVS DK II++RGK+Y
Sbjct: 319 DELVRIDCKGLPKSDYRKIGVKLRDLVPCILVSFDKE----QIIIWRGKDY 365
>gi|356495236|ref|XP_003516485.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 705
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 241 SNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEE 300
S E+ + + + E+ RL + + + +G G+T ++++IH W K+K
Sbjct: 230 SRDEVLGEPLTKDEINRLIKATEKSSRQLNIGRDGLTHNMLENIHTYWMRRSACKIKCRG 289
Query: 301 PHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYK 338
++ M + LE RTGG +I+R +V LFRG Y
Sbjct: 290 VCTVDMDNVCQQLEERTGGKIIYRQAGTVYLFRGKNYN 327
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 680 LLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTP 739
L +GR G+ +EN+H +W R KI +G + + LE +GG ++
Sbjct: 258 LNIGRDGLTHNMLENIHTYWMRRSACKIKCRGVCTVDMDNVCQQLEERTGGKIIYR---- 313
Query: 740 KGIAIIVYRGKNY 752
+ + ++RGKNY
Sbjct: 314 QAGTVYLFRGKNY 326
>gi|242078343|ref|XP_002443940.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
gi|241940290|gb|EES13435.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
Length = 437
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 264 RMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIW 323
R + +G G+T +++ IH WK E V++K ++ M+ LE +TGG++I
Sbjct: 180 RTKRQINLGRDGLTHNMLNDIHNNWKTCEAVRIKCLGVPTVDMQNVCHQLEDKTGGVIIH 239
Query: 324 RSGSSVVLFRGMAY 337
R GS ++L+RG Y
Sbjct: 240 RHGSLLILYRGRHY 253
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 614 LSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMG 673
+ RH SLL L + +K + L K E + P + + +E +T EE +RK G
Sbjct: 238 IHRHGSLL-ILYRGRHYNPKKRPVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKQMRKKG 296
Query: 674 LSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLV 733
L L + G Y + + + ELV+I KG + K+I + L +LV
Sbjct: 297 LHAPVLTKLAKNGYYASIVPMVRDAFLMDELVRIDCKGLPKSDYKKIGVKLRDLVPCILV 356
Query: 734 SLDKTPKGIAIIVYRGK 750
S DK IIV+RGK
Sbjct: 357 SFDKE----QIIVWRGK 369
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 659 ETITNEER-FLLRKMGLS-MKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ 716
E +T ER FL+ K + K + LGR G+ + ++H +WK E V+I G
Sbjct: 162 EPLTPAERAFLVDKCQKNRTKRQINLGRDGLTHNMLNDIHNNWKTCEAVRIKCLGVPTVD 221
Query: 717 VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
++ + LE ++GGV++ G +I+YRG++Y
Sbjct: 222 MQNVCHQLEDKTGGVIIHR----HGSLLILYRGRHY 253
>gi|242080803|ref|XP_002445170.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
gi|241941520|gb|EES14665.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
Length = 353
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T ++D IH WK E V++K +L M LE +TGG VI+RS + ++
Sbjct: 168 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRSINIII 227
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 228 LYRGRNY 234
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G + I LE ++GG ++
Sbjct: 168 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRSIN--- 224
Query: 742 IAIIVYRGKNY 752
II+YRG+NY
Sbjct: 225 -IIILYRGRNY 234
>gi|226508160|ref|NP_001140244.1| uncharacterized protein LOC100272285 [Zea mays]
gi|194698680|gb|ACF83424.1| unknown [Zea mays]
gi|413917198|gb|AFW57130.1| hypothetical protein ZEAMMB73_054545 [Zea mays]
Length = 424
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 264 RMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIW 323
R + +G G T ++ +H WK E V++K ++ M+ LE +TGGL+I
Sbjct: 181 RTKRQINLGRDGFTHNMLSDVHNNWKTCEAVRIKCLGVPTVDMQNVCHQLEDKTGGLIIH 240
Query: 324 RSGSSVVLFRGMAY 337
R GS ++L+RG Y
Sbjct: 241 RHGSLLILYRGRHY 254
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 614 LSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMG 673
+ RH SLL L + +K + L K E + P + + +E +T EE +RK G
Sbjct: 239 IHRHGSLL-ILYRGRHYNPKKRPVVPLMLWKPAEPVYPRLIKTTIEGLTVEETKQMRKKG 297
Query: 674 LSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLV 733
L + L + G Y + + + ELV+I KG + K+I + L +LV
Sbjct: 298 LHVPVLTKLAKNGYYASLVPMVRDAFLTDELVRIDCKGLPKSDYKKIGVKLRDLVPCILV 357
Query: 734 SLDKTPKGIAIIVYRG 749
S DK IIV+RG
Sbjct: 358 SFDKE----QIIVWRG 369
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G + ++H +WK E V+I G ++ + LE ++GG+++ G
Sbjct: 188 LGRDGFTHNMLSDVHNNWKTCEAVRIKCLGVPTVDMQNVCHQLEDKTGGLIIHR----HG 243
Query: 742 IAIIVYRGKNY 752
+I+YRG++Y
Sbjct: 244 SLLILYRGRHY 254
>gi|357132021|ref|XP_003567631.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like
[Brachypodium distachyon]
Length = 607
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T E L K +S L +GR G+ +E +H HW+ +E+ K+ +G +K
Sbjct: 231 EPLTPAEVRALVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 290
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +SGG ++ G + +YRG+NY
Sbjct: 291 NLCYHLEEKSGGKVIHR----VGGVVFLYRGRNY 320
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 216 QIKGYHEVDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAG 275
+++G ++D V P D RRR L E + P E++ L + + +G G
Sbjct: 205 EVRGRRQLDLGRVSP----GDGRRREEV-LGEPLTPA-EVRALVKPHMSHNRQLNIGRDG 258
Query: 276 ITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGM 335
+T +++ IH W+ E+ K++ ++ MK LE ++GG VI R G V L+RG
Sbjct: 259 LTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGR 318
Query: 336 AYK 338
Y
Sbjct: 319 NYN 321
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE +R G ++ P L + GIY ++++ ++ +LVKI +G + K
Sbjct: 349 EGLTIEEAAEMRIRGQNLLPIFKLAKNGIYLNLVKDVRDAFEGNDLVKINCEGLEPSDYK 408
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN----YVRPLKLRPQ 761
+I L +L+S D I++YRGK Y +PL L P+
Sbjct: 409 KIGAKLRDLVPCILLSFDNE----QILIYRGKEWKSRYSKPLTLIPK 451
>gi|302763677|ref|XP_002965260.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
gi|302809791|ref|XP_002986588.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300145771|gb|EFJ12445.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300167493|gb|EFJ34098.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
Length = 366
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G+T ++D IH WK V+KL+ + ++ M +E +TGG +I R G
Sbjct: 112 QVNIGKDGLTHNMLDLIHCHWKRRRVIKLRCKGVPTIDMDNVCFHIEDKTGGKIIQRHGG 171
Query: 328 SVVLFRGMAY 337
S+ LFRG Y
Sbjct: 172 SIYLFRGRNY 181
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
+G+ G+ ++ +H HWK R ++K+ KG + + +E ++GG ++ G
Sbjct: 115 IGKDGLTHNMLDLIHCHWKRRRVIKLRCKGVPTIDMDNVCFHIEDKTGGKIIQR----HG 170
Query: 742 IAIIVYRGKNY 752
+I ++RG+NY
Sbjct: 171 GSIYLFRGRNY 181
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 669 LRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAES 728
LR+ G +KP L R G+Y + + ++ ELVK+ +G + A V++I L+
Sbjct: 220 LRRRGRRVKPLTKLSRNGVYLHLVNEVKSAFEVDELVKLDCRGMNIADVRKIGAKLKELL 279
Query: 729 GGVLVSLDKTPKGIAIIVYRG 749
G VL+S + ++++RG
Sbjct: 280 GIVLLSFEDN----CVLMWRG 296
>gi|222618317|gb|EEE54449.1| hypothetical protein OsJ_01538 [Oryza sativa Japonica Group]
Length = 587
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T E L K +S L +GR G+ +E +H HW+ +E+ K+ +G +K
Sbjct: 208 EPLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 267
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +SGG ++ G + +YRG+NY
Sbjct: 268 NLCYHLEEKSGGKVIHR----VGGVVFLYRGRNY 297
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 240 RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFE 299
RS E+ + + E++ L + + +G G+T +++ IH W+ E+ K++
Sbjct: 200 RSREEVLGEPLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCR 259
Query: 300 EPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYK 338
++ MK LE ++GG VI R G V L+RG Y
Sbjct: 260 GVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRNYN 298
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE +R+ G + P L + GIY + ++ ++ +LVKI +G + + K
Sbjct: 326 EGLTKEEADEMRRRGKDLLPICKLAKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYK 385
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN----YVRPLKLRPQ 761
+I L VL+S D I+++RGK Y +PL L P+
Sbjct: 386 KIGAKLRDLVPCVLLSFDNE----QILMFRGKEWKSRYPKPLTLIPK 428
>gi|218200589|gb|EEC83016.1| hypothetical protein OsI_28075 [Oryza sativa Indica Group]
Length = 365
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 270 KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 329
+G G+T ++D IH WK E V++K +L M LE +TGG VI+R+ + +
Sbjct: 166 NLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINIL 225
Query: 330 VLFRGMAY 337
+L+RG Y
Sbjct: 226 ILYRGRNY 233
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ I+++H HWK E V+I G + I LE ++GG ++ +
Sbjct: 167 LGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNIN--- 223
Query: 742 IAIIVYRGKNYVRPLKLRPQNLLTRRQALA 771
+I+YRG+NY K RPQ L + LA
Sbjct: 224 -ILILYRGRNY--DPKQRPQIPLMLWKPLA 250
>gi|115475115|ref|NP_001061154.1| Os08g0188000 [Oryza sativa Japonica Group]
gi|113623123|dbj|BAF23068.1| Os08g0188000, partial [Oryza sativa Japonica Group]
Length = 361
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 270 KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 329
+G G+T ++D IH WK E V++K +L M LE +TGG VI+R+ + +
Sbjct: 162 NLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINIL 221
Query: 330 VLFRGMAY 337
+L+RG Y
Sbjct: 222 ILYRGRNY 229
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ I+++H HWK E V+I G + I LE ++GG ++ +
Sbjct: 163 LGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNIN--- 219
Query: 742 IAIIVYRGKNYVRPLKLRPQNLLTRRQALA 771
+I+YRG+NY K RPQ L + LA
Sbjct: 220 -ILILYRGRNY--DPKQRPQIPLMLWKPLA 246
>gi|143955290|sp|Q0J7J7.2|CAF2M_ORYSJ RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|222640037|gb|EEE68169.1| hypothetical protein OsJ_26288 [Oryza sativa Japonica Group]
Length = 366
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 270 KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 329
+G G+T ++D IH WK E V++K +L M LE +TGG VI+R+ + +
Sbjct: 167 NLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINIL 226
Query: 330 VLFRGMAY 337
+L+RG Y
Sbjct: 227 ILYRGRNY 234
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ I+++H HWK E V+I G + I LE ++GG ++ +
Sbjct: 168 LGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNIN--- 224
Query: 742 IAIIVYRGKNYVRPLKLRPQNLLTRRQALA 771
+I+YRG+NY K RPQ L + LA
Sbjct: 225 -ILILYRGRNY--DPKQRPQIPLMLWKPLA 251
>gi|115436276|ref|NP_001042896.1| Os01g0323300 [Oryza sativa Japonica Group]
gi|75115027|sp|Q657G7.1|CAF2P_ORYSJ RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|52075771|dbj|BAD44991.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|52076260|dbj|BAD45045.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|113532427|dbj|BAF04810.1| Os01g0323300 [Oryza sativa Japonica Group]
Length = 607
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T E L K +S L +GR G+ +E +H HW+ +E+ K+ +G +K
Sbjct: 228 EPLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 287
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +SGG ++ G + +YRG+NY
Sbjct: 288 NLCYHLEEKSGGKVIHR----VGGVVFLYRGRNY 317
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 240 RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFE 299
RS E+ + + E++ L + + +G G+T +++ IH W+ E+ K++
Sbjct: 220 RSREEVLGEPLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCR 279
Query: 300 EPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYK 338
++ MK LE ++GG VI R G V L+RG Y
Sbjct: 280 GVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRNYN 318
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE +R+ G + P L + GIY + ++ ++ +LVKI +G + + K
Sbjct: 346 EGLTKEEADEMRRRGKDLLPICKLAKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYK 405
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN----YVRPLKLRPQ 761
+I L VL+S D I+++RGK Y +PL L P+
Sbjct: 406 KIGAKLRDLVPCVLLSFDNE----QILMFRGKEWKSRYPKPLTLIPK 448
>gi|125525663|gb|EAY73777.1| hypothetical protein OsI_01650 [Oryza sativa Indica Group]
Length = 609
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T E L K +S L +GR G+ +E +H HW+ +E+ K+ +G +K
Sbjct: 230 EPLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 289
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +SGG ++ G + +YRG+NY
Sbjct: 290 NLCYHLEEKSGGKVIHR----VGGVVFLYRGRNY 319
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 240 RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFE 299
RS E+ + + E++ L + + +G G+T +++ IH W+ E+ K++
Sbjct: 222 RSREEVLGEPLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCR 281
Query: 300 EPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYK 338
++ MK LE ++GG VI R G V L+RG Y
Sbjct: 282 GVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRNYN 320
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE +R+ G + P L + GIY + ++ ++ +LVKI +G + + K
Sbjct: 348 EGLTKEEADEMRRRGKDLLPICKLAKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYK 407
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN----YVRPLKLRPQ 761
+I L VL+S D I+++RGK Y +PL L P+
Sbjct: 408 KIGAKLRDLVPCVLLSFDNE----QILMFRGKEWKSRYPKPLTLIPK 450
>gi|449443167|ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
gi|449521361|ref|XP_004167698.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
Length = 745
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L + ++ L +GR G+ +EN+H WK R + KI KG +
Sbjct: 250 EPLTKEEIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMD 309
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
+ LE +GG ++ +G A+ +YRG+NY K RP+
Sbjct: 310 NVKQQLEERTGGKII----YSRGGALYLYRGRNYN--YKTRPR 346
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T ++++IH WK V K+K + ++ M + LE RTGG +I+ G ++
Sbjct: 273 IGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMDNVKQQLEERTGGKIIYSRGGALY 332
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 333 LYRGRNY 339
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
+ +T EE +RK G + P LG+ G+Y ++++ ++ ELV+I +G + + +
Sbjct: 368 DGLTLEEVTEMRKKGRKLIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGSDFR 427
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+I L+ VL+S + I+++RG+++
Sbjct: 428 KIGAKLKDLVPCVLISFESE----HILLWRGRDW 457
>gi|326525102|dbj|BAK07821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 264 RMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIW 323
R + +G G+T +++ IH WK E V++K ++ M+ LE +TGGL+I
Sbjct: 179 RTKRQINLGRDGLTHNMLNDIHNHWKHGEGVRVKCLGVPTVDMQNVCHELEDKTGGLIIH 238
Query: 324 RSGSSVVLFRGMAY 337
R G ++L+RG Y
Sbjct: 239 RHGGQLILYRGRHY 252
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 659 ETITNEER-FLLRKMGLS-MKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ 716
E +T ER FL+ K + K + LGR G+ + ++H HWK+ E V++ G
Sbjct: 161 EPLTPAERSFLVEKCQKNRTKRQINLGRDGLTHNMLNDIHNHWKHGEGVRVKCLGVPTVD 220
Query: 717 VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
++ + LE ++GG+++ G +I+YRG++Y
Sbjct: 221 MQNVCHELEDKTGGLIIHR----HGGQLILYRGRHY 252
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
L K E + P + + +E +T EE +RK GL L + G Y + + +
Sbjct: 264 LWKPAEPIYPRLIKTTIEGLTVEETKEMRKKGLHASVLTKLAKNGYYASLVPMVRDGFLT 323
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
ELV+I KG + ++I + L +LVS DK IIV+RGK++
Sbjct: 324 DELVRIDCKGLPKSDYRKIGVKLRDLVPCILVSFDKE----QIIVWRGKDH 370
>gi|242052829|ref|XP_002455560.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
gi|241927535|gb|EES00680.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
Length = 614
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T E L K +S L +GR G+ +E +H HW+ +E+ K+ +G +K
Sbjct: 234 EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 293
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +SGG ++ G + VYRG++Y
Sbjct: 294 NLCYHLEEKSGGKVIHR----VGGVVFVYRGRHY 323
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
L E + P E++ L + + +G G+T +++ IH W+ E+ K++ ++
Sbjct: 232 LGEPLTPS-EVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTV 290
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
MK LE ++GG VI R G V ++RG Y
Sbjct: 291 DMKNLCYHLEEKSGGKVIHRVGGVVFVYRGRHY 323
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE +R+ G + P L + GIY ++++ ++ +LVKI +G + + K
Sbjct: 352 EGLTKEEADEMRRKGRDLLPICKLAKNGIYITLVKDVRDAFEGNDLVKIDCEGLNPSDYK 411
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN----YVRPLKLRPQ 761
+I L VL+S D I++YRGK Y +PL L P+
Sbjct: 412 KIGAKLRDLVPCVLLSFDDE----QILMYRGKEWKSRYSKPLTLIPK 454
>gi|194697426|gb|ACF82797.1| unknown [Zea mays]
Length = 611
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T E L K +S L +GR G+ +E +H HW+ +E+ K+ +G +K
Sbjct: 232 EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 291
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +SGG ++ G + +YRG++Y
Sbjct: 292 NLCYHLEEKSGGKVIHR----VGGVVFLYRGRHY 321
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
L E + P E++ L + + +G G+T +++ IH W+ E+ K++ ++
Sbjct: 230 LGEPLTPS-EVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTV 288
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
MK LE ++GG VI R G V L+RG Y
Sbjct: 289 DMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRHY 321
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
+ T EE +R+ G + P L + GIY ++++ ++ +LVKI +G + + K
Sbjct: 350 DGFTKEEADEMRRKGRDLLPICKLAKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYK 409
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN----YVRPLKLRPQ 761
+I L VL+S D I+++RGK Y +PL L P+
Sbjct: 410 KIGAKLRDLVPCVLLSFDDE----QILMHRGKEWKSRYSKPLTLIPK 452
>gi|162464008|ref|NP_001105669.1| CRS2-associated factor 2, chloroplastic precursor [Zea mays]
gi|75147311|sp|Q84N48.1|CAF2P_MAIZE RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|30349369|gb|AAP22136.1| CRS2-associated factor 2 [Zea mays]
gi|414877310|tpg|DAA54441.1| TPA: crs2 associated factor2 [Zea mays]
Length = 611
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T E L K +S L +GR G+ +E +H HW+ +E+ K+ +G +K
Sbjct: 232 EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 291
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +SGG ++ G + +YRG++Y
Sbjct: 292 NLCYHLEEKSGGKVIHR----VGGVVFLYRGRHY 321
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 245 LAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSL 304
L E + P E++ L + + +G G+T +++ IH W+ E+ K++ ++
Sbjct: 230 LGEPLTPS-EVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTV 288
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
MK LE ++GG VI R G V L+RG Y
Sbjct: 289 DMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRHY 321
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
+ T EE +R+ G + P L + GIY ++++ ++ +LVKI +G + + K
Sbjct: 350 DGFTKEEADEMRRKGRDLLPICKLAKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYK 409
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN----YVRPLKLRPQ 761
+I L VL+S D I+++RGK Y +PL L P+
Sbjct: 410 KIGAKLRDLVPCVLLSFDDE----QILMHRGKEWKSRYSKPLTLIPK 452
>gi|326525845|dbj|BAJ93099.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 607
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T+ E L K +S L +GR G+ +E +H HW+ +E+ K+ +G +
Sbjct: 230 EPLTSAETRELVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEVCKVRCRGVPTVDMN 289
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE +SGG ++ G + +YRG+NY
Sbjct: 290 NLCYHLEEKSGGKVIKR----VGGVVFLYRGRNY 319
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE +R+ G + P L L + GIY ++++ ++ +LVKI KG + K
Sbjct: 348 EGLTVEEAAEMRRRGQILLPILKLAKNGIYINLVKDVQDAFEGNDLVKIDCKGLEPSDYK 407
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKN----YVRPLKLRPQ 761
+I L VL+S DK I++YRGK Y++PL P+
Sbjct: 408 KIGAKLRDLVPCVLLSFDKE----QILIYRGKGWKSRYLKPLTPFPK 450
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 270 KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 329
+G G+T +++ IH W+ EV K++ ++ M LE ++GG VI R G V
Sbjct: 252 NIGRDGLTHNMLEMIHCHWRRQEVCKVRCRGVPTVDMNNLCYHLEEKSGGKVIKRVGGVV 311
Query: 330 VLFRGMAYK 338
L+RG Y
Sbjct: 312 FLYRGRNYN 320
>gi|225425575|ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
gi|297739063|emb|CBI28552.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 218 KGYHEVDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGIT 277
KG V+ P P + R L E + + E++ L L + +G G+T
Sbjct: 165 KGVKRVEMPGPFPLGKFPVEGRTREEILGEPLS-KAEIRMLVKPYLSHNRQVNLGRDGLT 223
Query: 278 QALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
+++ IH WK V K++ + ++ M LE +TGG +I R G V LFRG Y
Sbjct: 224 HNMLELIHSHWKRQRVCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNY 283
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E ++ E +L K LS + LGR G+ +E +H HWK + + K+ KG +
Sbjct: 194 EPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTIDMD 253
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
+ LE ++GG ++ G + ++RG+NY + RPQ
Sbjct: 254 NVCHHLEEKTGGKIIHR----VGGVVYLFRGRNYN--YRTRPQ 290
>gi|356560247|ref|XP_003548405.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Glycine
max]
Length = 396
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T +++ IH WK E V++K ++ M LE +T G VI+R G +++
Sbjct: 182 LGRDGLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDMNNICTQLEDKTFGKVIFRHGGTLI 241
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 242 LYRGRNY 248
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + +H HWK+ E V+I G + I LE ++ G ++ G
Sbjct: 182 LGRDGLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDMNNICTQLEDKTFGKVIFRH----G 237
Query: 742 IAIIVYRGKNY 752
+I+YRG+NY
Sbjct: 238 GTLILYRGRNY 248
>gi|225461009|ref|XP_002278505.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Vitis
vinifera]
Length = 452
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 222 EVDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALV 281
EV DP+V+ + R+ L+E I E ++R R+ + +G G+T ++
Sbjct: 129 EVVDPAVV----SEQRKAVLGEPLSEDEIAE-LVERYRHSDCS--RQINLGKGGVTHNML 181
Query: 282 DSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
D IH WK E V++K +L M+ LE + GG +I+R+ + ++L+RG Y
Sbjct: 182 DDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKIIYRNINIILLYRGRNY 237
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G ++ + LE + GG ++ +
Sbjct: 171 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKIIYRNIN--- 227
Query: 742 IAIIVYRGKNY 752
I++YRG+NY
Sbjct: 228 -IILLYRGRNY 237
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
+ +T EE +R GL++ P + L + G+Y +E + ++ E+V++ + K
Sbjct: 266 DGLTFEETKEMRNRGLNLPPVMKLTKNGVYVNVVERVREAFRSEEVVRLDCTHVGSSDCK 325
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLTRRQALARSV 774
+I + L V + K II+++GKN + + QNL + ALA SV
Sbjct: 326 RIGVKLRDLVPCVPILF----KDEQIILWKGKNGSSRTERQAQNLAFFKSALAYSV 377
>gi|15240416|ref|NP_200300.1| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75170294|sp|Q9FFU1.1|CAF2M_ARATH RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|9758269|dbj|BAB08768.1| unnamed protein product [Arabidopsis thaliana]
gi|332009170|gb|AED96553.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 358
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G+T ++D IH WK E V++K +L M LE ++GG +++R+ +
Sbjct: 163 QINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNIN 222
Query: 328 SVVLFRGMAY 337
+VL+RG Y
Sbjct: 223 ILVLYRGRNY 232
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ I+++H HWK E V+I G + I LE +SGG +V +
Sbjct: 166 LGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVY-----RN 220
Query: 742 IAIIV-YRGKNY 752
I I+V YRG+NY
Sbjct: 221 INILVLYRGRNY 232
>gi|356572588|ref|XP_003554450.1| PREDICTED: uncharacterized protein LOC100801865 [Glycine max]
Length = 70
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 27/33 (81%), Gaps = 3/33 (9%)
Query: 465 PHFAL---GRNRELQGLAKAMVKLWEKSAIAKI 494
PHFAL GRNRELQGLA+AMVK WE SAI K+
Sbjct: 3 PHFALANAGRNRELQGLARAMVKRWETSAIQKL 35
>gi|297737420|emb|CBI26621.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 222 EVDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALV 281
EV DP+V+ + R+ L+E I E ++R R+ + +G G+T ++
Sbjct: 110 EVVDPAVV----SEQRKAVLGEPLSEDEIAE-LVERYRHSDCS--RQINLGKGGVTHNML 162
Query: 282 DSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
D IH WK E V++K +L M+ LE + GG +I+R+ + ++L+RG Y
Sbjct: 163 DDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKIIYRNINIILLYRGRNY 218
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G ++ + LE + GG ++ +
Sbjct: 152 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKIIYRNIN--- 208
Query: 742 IAIIVYRGKNY 752
I++YRG+NY
Sbjct: 209 -IILLYRGRNY 218
>gi|226530577|ref|NP_001147995.1| LOC100281604 [Zea mays]
gi|195615022|gb|ACG29341.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T ++D IH WK E V++K +L M LE +TGG V+ RS + ++
Sbjct: 164 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRSINIII 223
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 224 LYRGRNY 230
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G + I LE ++GG +VS +
Sbjct: 164 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVS-----RS 218
Query: 742 IAIIV-YRGKNY 752
I II+ YRG+NY
Sbjct: 219 INIIILYRGRNY 230
>gi|238014734|gb|ACR38402.1| unknown [Zea mays]
gi|413921148|gb|AFW61080.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T ++D IH WK E V++K +L M LE +TGG V+ RS + ++
Sbjct: 164 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRSINIII 223
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 224 LYRGRNY 230
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G + I LE ++GG +VS +
Sbjct: 164 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVS-----RS 218
Query: 742 IAIIV-YRGKNY 752
I II+ YRG+NY
Sbjct: 219 INIIILYRGRNY 230
>gi|413921149|gb|AFW61081.1| hypothetical protein ZEAMMB73_173916 [Zea mays]
Length = 291
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T ++D IH WK E V++K +L M LE +TGG V+ RS + ++
Sbjct: 164 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRSINIII 223
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 224 LYRGRNY 230
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G + I LE ++GG +VS +
Sbjct: 164 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVS-----RS 218
Query: 742 IAIIV-YRGKNY 752
I II+ YRG+NY
Sbjct: 219 INIIILYRGRNY 230
>gi|357443457|ref|XP_003592006.1| hypothetical protein MTR_1g097730 [Medicago truncatula]
gi|357443499|ref|XP_003592027.1| hypothetical protein MTR_1g097960 [Medicago truncatula]
gi|355481054|gb|AES62257.1| hypothetical protein MTR_1g097730 [Medicago truncatula]
gi|355481075|gb|AES62278.1| hypothetical protein MTR_1g097960 [Medicago truncatula]
Length = 56
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 35/61 (57%), Gaps = 10/61 (16%)
Query: 394 MDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGL---RD 450
M+L ELN LLDELGPRFKD + D LP VVP YK +LLPY + L D
Sbjct: 1 MELIELNLLLDELGPRFKDL-------ILLDQLPAVVPRYKTSFKLLPYEVNSCLSRKND 53
Query: 451 C 451
C
Sbjct: 54 C 54
>gi|357144748|ref|XP_003573400.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like
[Brachypodium distachyon]
Length = 365
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 270 KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 329
+G G+T ++D IH WK E V++K +L M LE +TGG +I RS + +
Sbjct: 166 NLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVATLDMDNICFHLEDKTGGKIIHRSINIL 225
Query: 330 VLFRGMAY 337
+L+RG Y
Sbjct: 226 ILYRGRNY 233
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G + + I LE ++GG ++ +
Sbjct: 167 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVATLDMDNICFHLEDKTGGKIIH-----RS 221
Query: 742 IAI-IVYRGKNY 752
I I I+YRG+NY
Sbjct: 222 INILILYRGRNY 233
>gi|297792957|ref|XP_002864363.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
gi|297310198|gb|EFH40622.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G+T ++D IH WK E V++K +L M LE ++GG +++R +
Sbjct: 159 QINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRHIN 218
Query: 328 SVVLFRGMAY 337
+VL+RG Y
Sbjct: 219 ILVLYRGRNY 228
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ I+++H HWK E V+I G + I LE +SGG +V +
Sbjct: 162 LGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVY-----RH 216
Query: 742 IAIIV-YRGKNY 752
I I+V YRG+NY
Sbjct: 217 INILVLYRGRNY 228
>gi|224124340|ref|XP_002319307.1| predicted protein [Populus trichocarpa]
gi|222857683|gb|EEE95230.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T ++D IH WK E V++K +L M LE ++GG V++R+ + ++
Sbjct: 162 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVVYRNINILL 221
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 222 LYRGRNY 228
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G + + LE +SGG +V +
Sbjct: 162 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVVY-----RN 216
Query: 742 IAI-IVYRGKNY 752
I I ++YRG+NY
Sbjct: 217 INILLLYRGRNY 228
>gi|22329751|ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4 [Arabidopsis thaliana]
gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27 [Arabidopsis thaliana]
gi|17065312|gb|AAL32810.1| Unknown protein [Arabidopsis thaliana]
gi|21387129|gb|AAM47968.1| unknown protein [Arabidopsis thaliana]
gi|332192262|gb|AEE30383.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 564
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G T +++ IH WK V K++ + ++ M +LE +TGG +I R G
Sbjct: 221 QVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGG 280
Query: 328 SVVLFRGMAY 337
V LFRG Y
Sbjct: 281 VVYLFRGRNY 290
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 673 GLSMKPYLL------LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEA 726
G+ +KP++ LGR G +E +H HWK R + K+ KG + + LE
Sbjct: 209 GMLIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEE 268
Query: 727 ESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLL 764
++GG ++ G + ++RG+NY + RPQ L
Sbjct: 269 KTGGEIIHR----VGGVVYLFRGRNYN--YRTRPQYPL 300
>gi|255568848|ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
gi|223535358|gb|EEF37033.1| conserved hypothetical protein [Ricinus communis]
Length = 561
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 240 RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFE 299
+S E+ K + E+++L L + +G G+T +++ IH W+ V K++ +
Sbjct: 182 KSRREILGKPLTRWEIKQLVKPLLSDNRQVNLGRDGLTHNMLELIHSHWRRSPVCKVRCK 241
Query: 300 EPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
++ M LE RTGG +I+R G V LF G Y
Sbjct: 242 GIPTVDMNNICRHLEERTGGKIIYRIGGVVYLFCGRNY 279
>gi|224110940|ref|XP_002315689.1| predicted protein [Populus trichocarpa]
gi|222864729|gb|EEF01860.1| predicted protein [Populus trichocarpa]
Length = 506
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 198 PIELSKDRHREVGSLNQKQI--KGYHEVDDPSVLPWKRNTDRRRRSNTELAEKMIPEHEL 255
P++ SK + S N KG V+ P P+ + + + S E+ + + E+
Sbjct: 89 PLKTSKKKIPVFDSFNPPPAGKKGVKYVEMPGPYPFGKFPEEGK-SREEILGEPLKTWEI 147
Query: 256 QRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILER 315
+ L L + +G G+T +++ +H WK V K++ + ++ M LE
Sbjct: 148 KLLIKPHLSDNRQVNLGEDGLTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDNVCRHLEE 207
Query: 316 RTGGLVIWRSGSSVVLFRGMAY 337
+TGG +I R G V LFRG Y
Sbjct: 208 KTGGKIIHRVGGVVYLFRGRNY 229
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 668 LLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAE 727
LL K LS + LG G+ +E +H HWK R + K+ KG + + LE +
Sbjct: 149 LLIKPHLSDNRQVNLGEDGLTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDNVCRHLEEK 208
Query: 728 SGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
+GG ++ G + ++RG+NY + RPQ
Sbjct: 209 TGGKIIHR----VGGVVYLFRGRNYN--YRTRPQ 236
>gi|297850808|ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
gi|297339127|gb|EFH69544.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G T +++ IH WK V K++ + ++ M +LE +TGG +I R G
Sbjct: 223 QVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMDNVCRVLEEKTGGEIIHRVGG 282
Query: 328 SVVLFRGMAY 337
V LFRG Y
Sbjct: 283 VVYLFRGRNY 292
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 673 GLSMKPYLL------LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEA 726
G+ +KP++ LGR G +E +H HWK R + K+ KG + + LE
Sbjct: 211 GMLIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMDNVCRVLEE 270
Query: 727 ESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLL 764
++GG ++ G + ++RG+NY + RPQ L
Sbjct: 271 KTGGEIIHR----VGGVVYLFRGRNYN--YRTRPQYPL 302
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE R G S++P L + G+Y ++++ ++ LVK+ G + K
Sbjct: 321 EGLTKEEALEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSPLVKVDCPGLEPSDYK 380
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+I L+ VL+S D I+++RG+++
Sbjct: 381 KIGAKLKELVPCVLLSFDDE----QILMWRGRDW 410
>gi|225453847|ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera]
gi|296089125|emb|CBI38828.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 264 RMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIW 323
R + +G G+T +++ IH WK E V++K ++ MK LE +T G VI
Sbjct: 180 RTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTSGKVIH 239
Query: 324 RSGSSVVLFRGMAY 337
R G +VL+RG Y
Sbjct: 240 RQGGLLVLYRGRNY 253
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + ++H HWK+ E V+I G +K + LE ++ G ++ +G
Sbjct: 187 LGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTSGKVIHR----QG 242
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 243 GLLVLYRGRNY 253
>gi|359473240|ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Vitis vinifera]
Length = 560
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 218 KGYHEVDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGIT 277
KG V+ P P + R L E + + E++ L L + +G G+T
Sbjct: 165 KGVKRVEMPGPFPLGKFPVEGRTREEILGEPLS-KAEIRMLVKPYLSHNRQVNLGRDGLT 223
Query: 278 QALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
+++ IH WK V K+ + ++ M LE +TGG +I R G V LFRG Y
Sbjct: 224 HNMLELIHSHWKRQRVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNY 283
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E ++ E +L K LS + LGR G+ +E +H HWK + + K+ KG +
Sbjct: 194 EPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVWCKGVPTIDMD 253
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
+ LE ++GG ++ G + ++RG+NY + RPQ
Sbjct: 254 NVCHHLEEKTGGKIIHR----VGGVVYLFRGRNYN--YRTRPQ 290
>gi|317106625|dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas]
Length = 415
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 216 QIKGYHEVDDPSVLPWKRNTDRRRRSNTEL--AEKMIPEHELQRLRNISLRMLERTKVGS 273
++K DDP+ L KR R + L AE+ I + QR N + R + +G
Sbjct: 134 KVKSLDGTDDPN-LEEKRKLMREKIQGDPLTNAERKILVAQCQR--NKTKRQIN---LGR 187
Query: 274 AGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFR 333
G+T +++ IH WK E V++K ++ MK LE +T G +I R S+VL+R
Sbjct: 188 DGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYR 247
Query: 334 GMAY 337
G Y
Sbjct: 248 GRNY 251
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 659 ETITNEERFLLRKMGL--SMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ 716
+ +TN ER +L K + LGR G+ + ++H HWK+ E V+I G
Sbjct: 160 DPLTNAERKILVAQCQRNKTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVD 219
Query: 717 VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+K + LE ++ G ++ ++++YRG+NY
Sbjct: 220 MKNVCSQLEDKTFGKIIHRHCG----SLVLYRGRNY 251
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 646 QESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELV 705
E + P + + ++ ++ +E +RK GL++ L + G Y + + + ELV
Sbjct: 267 HEPIYPRLIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLTNELV 326
Query: 706 KIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
+I +G + K+I L +LV+ +K I+V+RGK+Y P
Sbjct: 327 RIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKE----QIVVWRGKDYKPP 372
>gi|255563935|ref|XP_002522967.1| conserved hypothetical protein [Ricinus communis]
gi|223537779|gb|EEF39397.1| conserved hypothetical protein [Ricinus communis]
Length = 409
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G+T ++D IH WK E V++K +L M LE ++GG +I+R +
Sbjct: 205 QINLGKGGVTHNMLDDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKIIYRHIN 264
Query: 328 SVVLFRGMAY 337
++L+RG Y
Sbjct: 265 ILLLYRGRNY 274
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G + + LE +SGG ++ +
Sbjct: 208 LGKGGVTHNMLDDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKIIY-----RH 262
Query: 742 IAI-IVYRGKNY 752
I I ++YRG+NY
Sbjct: 263 INILLLYRGRNY 274
>gi|356530475|ref|XP_003533806.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 388
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G+T ++ IH WK EVV++K +L M LE ++GG VI+R+ +
Sbjct: 162 QINLGKGGVTHNMLGDIHNHWKKAEVVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRNIN 221
Query: 328 SVVLFRGMAY 337
++L+RG Y
Sbjct: 222 ILLLYRGRNY 231
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ + ++H HWK E+V+I G + + LE +SGG ++ +
Sbjct: 165 LGKGGVTHNMLGDIHNHWKKAEVVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRNIN--- 221
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 222 -ILLLYRGRNY 231
>gi|449468496|ref|XP_004151957.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
gi|449489970|ref|XP_004158472.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
Length = 358
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G+T ++D IH WK E V++K +L M LE ++GG +I+R +
Sbjct: 164 QINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHIN 223
Query: 328 SVVLFRGMAY 337
++L+RG Y
Sbjct: 224 ILLLYRGRNY 233
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ ++++H HWK E V+I G + I LE +SGG ++ +
Sbjct: 167 LGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIY-----RH 221
Query: 742 IAI-IVYRGKNY 752
I I ++YRG+NY
Sbjct: 222 INILLLYRGRNY 233
>gi|449478585|ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 603
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 258 LRNISLRML--------ERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRT 309
L+N +RML + +G G+T +++ IH WK V K++ + ++ M
Sbjct: 242 LKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNI 301
Query: 310 HEILERRTGGLVIWRSGSSVVLFRGMAY 337
+E +TGG +I R G + LFRG Y
Sbjct: 302 CHHIEEKTGGKIIHRVGGVLYLFRGRNY 329
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E + N E +L K LS + LGR G+ +E +H HWK + + K+ KG +
Sbjct: 240 EPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMD 299
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
I +E ++GG ++ G + ++RG+NY + RPQ
Sbjct: 300 NICHHIEEKTGGKIIHR----VGGVLYLFRGRNYN--YRTRPQ 336
>gi|449434945|ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 602
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 258 LRNISLRML--------ERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRT 309
L+N +RML + +G G+T +++ IH WK V K++ + ++ M
Sbjct: 241 LKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNI 300
Query: 310 HEILERRTGGLVIWRSGSSVVLFRGMAY 337
+E +TGG +I R G + LFRG Y
Sbjct: 301 CHHIEEKTGGKIIHRVGGVLYLFRGRNY 328
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E + N E +L K LS + LGR G+ +E +H HWK + + K+ KG +
Sbjct: 239 EPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMD 298
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
I +E ++GG ++ G + ++RG+NY + RPQ
Sbjct: 299 NICHHIEEKTGGKIIHR----VGGVLYLFRGRNYN--YRTRPQ 335
>gi|297739073|emb|CBI28562.3| unnamed protein product [Vitis vinifera]
Length = 422
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 218 KGYHEVDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGIT 277
KG V+ P P + R+ E+ + + + E++ L L + +G G+T
Sbjct: 32 KGVKRVEMPGPFPLGK-FPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLT 90
Query: 278 QALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
+++ IH WK V K+ + ++ M LE +TGG +I R G V LFRG Y
Sbjct: 91 HNMLELIHSHWKRQRVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNY 150
Query: 338 K 338
Sbjct: 151 N 151
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E ++ E +L K LS + LGR G+ +E +H HWK + + K+ KG +
Sbjct: 61 EPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVWCKGVPTIDMD 120
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ LE ++GG ++ G + ++RG+NY
Sbjct: 121 NVCHHLEEKTGGKIIHR----VGGVVYLFRGRNY 150
>gi|307135966|gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
Length = 603
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 258 LRNISLRML--------ERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRT 309
L+N +RML + +G G+T +++ IH WK V K++ + ++ M
Sbjct: 242 LKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNI 301
Query: 310 HEILERRTGGLVIWRSGSSVVLFRGMAY 337
+E +TGG +I R G + LFRG Y
Sbjct: 302 CHHIEEKTGGKIIHRVGGVLYLFRGRNY 329
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E + N E +L K LS + LGR G+ +E +H HWK + + K+ KG +
Sbjct: 240 EPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMD 299
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQ 761
I +E ++GG ++ G + ++RG+NY + RPQ
Sbjct: 300 NICHHIEEKTGGKIIHR----VGGVLYLFRGRNYN--YRTRPQ 336
>gi|224130086|ref|XP_002320749.1| predicted protein [Populus trichocarpa]
gi|222861522|gb|EEE99064.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T +++ IH WK DE V++K ++ MK LE +T G +I R +V
Sbjct: 180 LGIDGLTHNMLNDIHNHWKHDEAVRVKCMGVPTVDMKNVCTQLEDKTFGKIIHRHCGLLV 239
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 240 LYRGRNY 246
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 614 LSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMG 673
+ RH LL L + R + L K E + P + + ++ ++ EE +RK G
Sbjct: 231 IHRHCGLL-VLYRGRNYHPRNRPVIPLMLWKPHEPVYPRLIKTTIDGLSIEETKEMRKRG 289
Query: 674 LSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLV 733
L++ L R G + + + + ELV+I +G + K+I L +LV
Sbjct: 290 LAVPALTKLSRNGYFGSLVPMVRDAFLVSELVRIDCQGLDRSDSKKIGCKLRDLVPCILV 349
Query: 734 SLDKTPKGIAIIVYRGKNYVRP 755
+ DK I+V+RGK+Y P
Sbjct: 350 TFDKE----QIVVWRGKDYKPP 367
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG G+ + ++H HWK+ E V++ G +K + LE ++ G ++
Sbjct: 180 LGIDGLTHNMLNDIHNHWKHDEAVRVKCMGVPTVDMKNVCTQLEDKTFGKIIHRHCG--- 236
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 237 -LLVLYRGRNY 246
>gi|356496030|ref|XP_003516873.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 358
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G+T ++ IH WK E V++K +L M LE ++GG VI+R+ +
Sbjct: 162 QINLGKGGVTHNMLGDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRNIN 221
Query: 328 SVVLFRGMAY 337
++L+RG Y
Sbjct: 222 ILLLYRGRNY 231
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LG+ G+ + ++H HWK E V+I G + + LE +SGG ++ +
Sbjct: 165 LGKGGVTHNMLGDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRNIN--- 221
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 222 -ILLLYRGRNY 231
>gi|449432211|ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Cucumis
sativus]
gi|449480099|ref|XP_004155799.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
mitochondrial-like [Cucumis sativus]
Length = 392
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T +++ IH W+ E V++K ++ MK LE +T G +I R G +V
Sbjct: 176 LGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLV 235
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 236 LYRGRNY 242
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + ++H HW++ E V+I G +K + LE ++ G ++ G
Sbjct: 176 LGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHR----HG 231
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 232 GFLVLYRGRNY 242
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
L + E + P + + ++ ++ +E +RK GL++ L + G Y + + +
Sbjct: 254 LWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLS 313
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
ELV+I KG + K+I L +LV+ DK I+V+RGK+Y
Sbjct: 314 CELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKE----QIVVWRGKDY 360
>gi|356524038|ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine
max]
Length = 593
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 240 RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFE 299
+S E+ + + + E+ L + + +G G+T +++ IH WK V K++
Sbjct: 187 KSREEILGEPLKKWEIHMLVKPMMSYNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCL 246
Query: 300 EPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
++ M +E +TGG +I R G V LFRG Y
Sbjct: 247 GVPTVDMDNVCHHIEEKTGGKIIHRVGGVVYLFRGRNY 284
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E + E +L K +S + LGR G+ +E +H HWK R + KI G +
Sbjct: 195 EPLKKWEIHMLVKPMMSYNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCLGVPTVDMD 254
Query: 719 QIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+ +E ++GG ++ G + ++RG+NY
Sbjct: 255 NVCHHIEEKTGGKIIHR----VGGVVYLFRGRNY 284
>gi|168014860|ref|XP_001759969.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688719|gb|EDQ75094.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 297
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%)
Query: 240 RSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFE 299
RS E+ + + + E++ L + R +G G+T +++ +H WK V ++K
Sbjct: 79 RSREEILGEPLTKDEVRELVGRACAERRRLDLGKDGLTHNMLELLHRHWKRRRVCRIKCY 138
Query: 300 EPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
++ M ++E ++GG +I RS + +FRG Y
Sbjct: 139 GVPTVDMDNLCRVIEEKSGGKIIRRSQGMLYVFRGRNY 176
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 680 LLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTP 739
L LG+ G+ +E +H HWK R + +I G + + +E +SGG ++ +
Sbjct: 108 LDLGKDGLTHNMLELLHRHWKRRRVCRIKCYGVPTVDMDNLCRVIEEKSGGKII---RRS 164
Query: 740 KGIAIIVYRGKNY 752
+G+ + V+RG+NY
Sbjct: 165 QGM-LYVFRGRNY 176
>gi|255541412|ref|XP_002511770.1| conserved hypothetical protein [Ricinus communis]
gi|223548950|gb|EEF50439.1| conserved hypothetical protein [Ricinus communis]
Length = 411
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 271 VGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVV 330
+G G+T +++ IH WK E V++K ++ MK LE +T G +I R +V
Sbjct: 180 LGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHCGLLV 239
Query: 331 LFRGMAY 337
L+RG Y
Sbjct: 240 LYRGRNY 246
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 659 ETITNEERFLLRKMGL--SMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ 716
+ +TN ER +L + K + LGR G+ + ++H HWK+ E V+I G
Sbjct: 155 QPLTNAERKILVESCQRHKTKKQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVD 214
Query: 717 VKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNY 752
+K + LE ++ G ++ G+ +++YRG+NY
Sbjct: 215 MKNVCTQLEDKTFGKIIHRH---CGL-LVLYRGRNY 246
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 614 LSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMG 673
+ RH LL L + +K + + + E + P + + +E ++ EE +RK G
Sbjct: 231 IHRHCGLL-VLYRGRNYHPKKRPVIPLMMWRPHEPIYPKLIKTTIEGLSIEETKEMRKKG 289
Query: 674 LSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLV 733
L++ L + G Y + + + ELV+I +G + K+I L +LV
Sbjct: 290 LALPALTKLAKNGYYASLVPMVRDAFLVNELVRIDCQGLPKSDYKKIGCKLRDLVPCILV 349
Query: 734 SLDKTPKGIAIIVYRGKNYVRP 755
+ +K I+V+RGK+Y P
Sbjct: 350 TFEKE----QIVVWRGKDYKPP 367
>gi|414884471|tpg|DAA60485.1| TPA: hypothetical protein ZEAMMB73_919812, partial [Zea mays]
Length = 250
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 659 ETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVK 718
E +T EE L K L K L +GR G+ +EN+H HWK + + KI KG +
Sbjct: 183 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMD 242
Query: 719 QIAISLE 725
I LE
Sbjct: 243 NICHQLE 249
>gi|14596153|gb|AAK68804.1| Unknown protein [Arabidopsis thaliana]
Length = 284
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + +++ HWK+ E V++ G +K + LE ++ G +VS
Sbjct: 182 LGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSG--- 238
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 239 -TLVLYRGRNY 248
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 268 RTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGS 327
+ +G G+T +++ ++ WK E V++K +L MK LE +T G V+ +
Sbjct: 179 QVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSG 238
Query: 328 SVVLFRGMAY 337
++VL+RG Y
Sbjct: 239 TLVLYRGRNY 248
>gi|297802930|ref|XP_002869349.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315185|gb|EFH45608.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 236 DRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKV--GSAGITQALVDSIHEKWKLDEV 293
++RR+ ++ + E E + L + R + +V G G+T +++ I+ WK E
Sbjct: 146 EKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDIYNHWKHAEA 205
Query: 294 VKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
V++K +L MK LE +T G V+ + ++VL+RG Y
Sbjct: 206 VRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHCGTLVLYRGRNY 249
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
L K E + P + + ++ ++ +E +RK GL++ L + G Y + + +
Sbjct: 261 LWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLV 320
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
ELV+I G K+I L +LV+ DK ++++RGKNY P
Sbjct: 321 SELVRIDCLGLDRKDYKKIGAKLRDLVPCILVTFDKE----QVVIWRGKNYKPP 370
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + +++ HWK+ E V++ G +K + LE ++ G +VS
Sbjct: 183 LGRDGLTHNMLNDIYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVS----KHC 238
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 239 GTLVLYRGRNY 249
>gi|312795596|ref|YP_004028518.1| RNA binding protein [Burkholderia rhizoxinica HKI 454]
gi|312167371|emb|CBW74374.1| Hypothetical RNA binding protein [Burkholderia rhizoxinica HKI 454]
Length = 195
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 660 TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKG 711
T+++ ER LR S+KP +L+G G+ D + + +H EL+KI V G
Sbjct: 5 TLSSAERSALRSQAHSLKPVVLIGADGLTDAVLNEIDVHLNAHELIKIRVFG 56
>gi|22329043|ref|NP_194830.2| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75161464|sp|Q8VYD9.1|CAF1M_ARATH RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|18176015|gb|AAL59968.1| unknown protein [Arabidopsis thaliana]
gi|20465409|gb|AAM20129.1| unknown protein [Arabidopsis thaliana]
gi|332660446|gb|AEE85846.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 405
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + +++ HWK+ E V++ G +K + LE ++ G +VS
Sbjct: 182 LGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSG--- 238
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 239 -TLVLYRGRNY 248
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 236 DRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKV--GSAGITQALVDSIHEKWKLDEV 293
++RR+ ++ + E E + L + R + +V G G+T +++ ++ WK E
Sbjct: 145 EKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEA 204
Query: 294 VKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
V++K +L MK LE +T G V+ + ++VL+RG Y
Sbjct: 205 VRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNY 248
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 642 LAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKY 701
L K E + P + + ++ ++ +E +RK GL++ L + G Y + + +
Sbjct: 260 LWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLV 319
Query: 702 RELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRP 755
ELV+I G K+I L +LV+ DK ++++RGK+Y P
Sbjct: 320 SELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKE----QVVIWRGKDYKPP 369
>gi|2980765|emb|CAA18192.1| hypothetical protein [Arabidopsis thaliana]
gi|7270003|emb|CAB79819.1| hypothetical protein [Arabidopsis thaliana]
Length = 392
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 223 VDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKV--GSAGITQAL 280
V+DP + ++RR+ ++ + E E + L + R + +V G G+T +
Sbjct: 138 VEDPKL------EEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNM 191
Query: 281 VDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
++ ++ WK E V++K +L MK LE +T G V+ + ++VL+RG Y
Sbjct: 192 LNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNY 248
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + +++ HWK+ E V++ G +K + LE ++ G +VS
Sbjct: 182 LGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSG--- 238
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 239 -TLVLYRGRNY 248
>gi|42573097|ref|NP_974645.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|332660445|gb|AEE85845.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 341
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 682 LGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKG 741
LGR G+ + +++ HWK+ E V++ G +K + LE ++ G +VS
Sbjct: 182 LGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSG--- 238
Query: 742 IAIIVYRGKNY 752
+++YRG+NY
Sbjct: 239 -TLVLYRGRNY 248
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 223 VDDPSVLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKV--GSAGITQAL 280
V+DP + ++RR+ ++ + E E + L + R + +V G G+T +
Sbjct: 138 VEDPKL------EEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNM 191
Query: 281 VDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAY 337
++ ++ WK E V++K +L MK LE +T G V+ + ++VL+RG Y
Sbjct: 192 LNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNY 248
>gi|414884469|tpg|DAA60483.1| TPA: CRS2-associated factor 1, Precursor [Zea mays]
Length = 392
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 425 LLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVK 484
L PV P Y + +P G+ P E TE R + PP LG+N L + +
Sbjct: 2 LWKPVAPVYPRLVTKVPGGLTPD----EATEMRTRGHQLPPICKLGKNGVYANLVNQVRE 57
Query: 485 LWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVFYRGNDF---LPPVV 541
+E + ++ + + ++ +LK L LL ++I+ +RG+D+ LPP+
Sbjct: 58 AFEACDLVRVDCS-GLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLPPLE 116
Query: 542 TDAVKERSKLTDIRQDEEERARHVASALIELK 573
+ + + ++ E+ H + L +++
Sbjct: 117 NSYEVTKVQESFSGKESNEKVTHSGNVLAQIE 148
>gi|332283362|ref|YP_004415273.1| hypothetical protein PT7_0109 [Pusillimonas sp. T7-7]
gi|330427315|gb|AEC18649.1| hypothetical protein PT7_0109 [Pusillimonas sp. T7-7]
Length = 190
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSF-AQVKQ 719
IT++ER LR ++P +L+G RG+ D ++ + L+ +L+K+ + G+ A+
Sbjct: 6 ITSQERSALRAAAHPLRPVVLIGDRGLSDSVLKEIDLNLNAHQLIKVRIAGEEREARNAM 65
Query: 720 IAISLEAESGGVLVSLDKTPKGIAIIVYR 748
+ E+ S ++ L KT +I+YR
Sbjct: 66 LETICESLSCALVHHLGKT-----LIIYR 89
>gi|405970011|gb|EKC34950.1| Myosin-10 [Crassostrea gigas]
Length = 6274
Score = 41.2 bits (95), Expect = 2.1, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 598 RQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESLDPAELPSD 657
+Q ED +K+++ RHA ++ LE + KRKL M D AL+K+ E D +L
Sbjct: 5431 KQNGEEDTDKVVKAVLAKRHAQEMQDLENQFR-TKRKL-MVDDALSKLHEKYD--KLRDS 5486
Query: 658 LETITNEERFLLRKMGLSMKPY 679
L EE L+K GLS + Y
Sbjct: 5487 LAKQHQEELAALQKKGLSPEEY 5508
>gi|414589365|tpg|DAA39936.1| TPA: putative protein phosphatase 2A family protein [Zea mays]
Length = 170
Score = 41.2 bits (95), Expect = 2.4, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 17/83 (20%)
Query: 305 QMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQTQDVTNEVMRN 364
Q RT+ L+RRTG L++WR GS +V++RG YK P +Q ++ V
Sbjct: 86 QFLRTNN-LKRRTGELIMWRPGSVMVVYRGSIYKRPL--------KSQALNGASSSVKGE 136
Query: 365 VGEHPPRSAMESYVPDSANNLEN 387
G ++P+++N +EN
Sbjct: 137 FG--------ALFIPNASNAVEN 151
>gi|186475642|ref|YP_001857112.1| hypothetical protein Bphy_0877 [Burkholderia phymatum STM815]
gi|184192101|gb|ACC70066.1| protein of unknown function UPF0044 [Burkholderia phymatum STM815]
Length = 187
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKG 711
+T+E+R LR ++KP +++G G+ D + + +H K +L+KI V G
Sbjct: 6 VTSEQRADLRSQAHALKPVVIIGAEGLTDAVLAEIKVHLKAHQLIKIRVFG 56
>gi|381159846|ref|ZP_09869078.1| putative RNA-binding protein, YhbY family [Thiorhodovibrio sp. 970]
gi|380877910|gb|EIC20002.1| putative RNA-binding protein, YhbY family [Thiorhodovibrio sp. 970]
Length = 101
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 42/76 (55%)
Query: 658 LETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQV 717
+ +IT ++R L++ +KP ++LG+ G+ + + + + + EL+K+ + A+
Sbjct: 1 MPSITPKQRHWLKQQAHHLKPVVMLGQHGLTEAVLREIRIALDHHELIKVKISAGDRAER 60
Query: 718 KQIAISLEAESGGVLV 733
Q+ ++ E+G LV
Sbjct: 61 DQLITAITEETGAELV 76
>gi|374335268|ref|YP_005091955.1| hypothetical protein GU3_07245 [Oceanimonas sp. GK1]
gi|372984955|gb|AEY01205.1| hypothetical protein GU3_07245 [Oceanimonas sp. GK1]
Length = 98
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 660 TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQ 719
T+ N++R L+ + S+KP +LLG+ G+ +G + + L + EL+K+ V + K
Sbjct: 2 TLNNKQRQYLKGLAHSLKPVVLLGQHGLTEGVLAEIDLALNHHELIKVKVAAEDRDVKKL 61
Query: 720 IAISLEAESGGVLV 733
+ ++ E+G V V
Sbjct: 62 VMDAIVRETGAVKV 75
>gi|307106930|gb|EFN55174.1| hypothetical protein CHLNCDRAFT_52520 [Chlorella variabilis]
Length = 187
Score = 40.0 bits (92), Expect = 5.7, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 250 IPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRT 309
+P L++LR L + + K+G G + L + +V ++ H+ MK
Sbjct: 63 LPPGRLKQLRRDGLALKDVIKLGRRGPAEGLAN---------QVARVYCHGKHAANMKVL 113
Query: 310 HEILERRTGGLVIWRSGSSVVLFRGMAYK 338
+ LE TGG+V+ ++G +V+L+RG ++
Sbjct: 114 VQQLEAATGGMVVHKAGGTVLLYRGDGWQ 142
Score = 39.3 bits (90), Expect = 9.2, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 16/95 (16%)
Query: 669 LRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAES 728
LR+ GL++K + LGRRG +G ++ ++ GK A +K + LEA +
Sbjct: 71 LRRDGLALKDVIKLGRRGPAEGLAN---------QVARVYCHGKHAANMKVLVQQLEAAT 121
Query: 729 GGVLVSLDKTPKGIAIIVYRGKNY---VRPLKLRP 760
GG++V G +++YRG + +PL +P
Sbjct: 122 GGMVVH----KAGGTVLLYRGDGWQGGAQPLAGQP 152
>gi|336320952|ref|YP_004600920.1| hypothetical protein Celgi_1845 [[Cellvibrio] gilvus ATCC 13127]
gi|336104533|gb|AEI12352.1| protein of unknown function DUF75 [[Cellvibrio] gilvus ATCC 13127]
Length = 286
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 251 PEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTH 310
P HEL R + L E A T AL + +H+ W ++V +L EE H Q+ R H
Sbjct: 5 PSHELTPDRPVLLAAFEGWNDAGAAATHAL-EHLHDVWGAEQVDELDPEEYHDFQVNRPH 63
Query: 311 EILERRTGGLVIW-----------RSGSSVVLFRGM 335
L + W RSG V+L G+
Sbjct: 64 VGLTADGSREITWPTTAVAVATAPRSGRRVILVHGI 99
>gi|150390075|ref|YP_001320124.1| hypothetical protein Amet_2308 [Alkaliphilus metalliredigens QYMF]
gi|149949937|gb|ABR48465.1| protein of unknown function UPF0044 [Alkaliphilus metalliredigens
QYMF]
Length = 113
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 657 DLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQ 716
++ +T ++R LRK+ ++P +G+ GI D +E + L REL+K+ + S
Sbjct: 13 SIKMLTGKQRSYLRKLANGIRPVTQIGKAGITDSLLEQLELTLASRELIKVSILETSLLD 72
Query: 717 VKQIA 721
K+ A
Sbjct: 73 TKETA 77
>gi|331270031|ref|YP_004396523.1| hypothetical protein CbC4_1852 [Clostridium botulinum BKT015925]
gi|329126581|gb|AEB76526.1| protein of unknown function UPF0044 [Clostridium botulinum
BKT015925]
Length = 97
Score = 39.3 bits (90), Expect = 9.5, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 661 ITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQI 720
I++++R LR M M+P +G+ GI D I+ + + REL+KI V SF ++
Sbjct: 2 ISSKQRSFLRGMANKMQPIFQVGKNGIDDAFIKQVEDALEARELIKIKVLNNSFFTAREA 61
Query: 721 --AISLEAESGGV 731
AI E E G+
Sbjct: 62 SDAICEEVECEGI 74
>gi|335042623|ref|ZP_08535650.1| RNA binding protein [Methylophaga aminisulfidivorans MP]
gi|333789237|gb|EGL55119.1| RNA binding protein [Methylophaga aminisulfidivorans MP]
Length = 97
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 42/76 (55%)
Query: 660 TITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQ 719
+T+++R L+ + ++KP +++G G+ D + + ++ EL+K+ V G+ A K
Sbjct: 2 AVTDKQRRYLKGLAHTLKPVVMIGNSGLTDSVLAEIDNALEHHELIKVRVSGQERADRKA 61
Query: 720 IAISLEAESGGVLVSL 735
+ + ESG LV +
Sbjct: 62 MLDKIAEESGADLVQV 77
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,491,050,303
Number of Sequences: 23463169
Number of extensions: 532972244
Number of successful extensions: 2096086
Number of sequences better than 100.0: 512
Number of HSP's better than 100.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 2092014
Number of HSP's gapped (non-prelim): 2551
length of query: 810
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 659
effective length of database: 8,816,256,848
effective search space: 5809913262832
effective search space used: 5809913262832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)