Query 003565
Match_columns 810
No_of_seqs 153 out of 222
Neff 3.6
Searched_HMMs 29240
Date Tue Mar 26 18:08:23 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003565.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1614-1618//hhsearch_pdb/003565hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1g3g_A Protien kinase SPK1; FH 1.0 1 1 97.9 10.1 86 703-794 63-154 (164)
2 1g6g_A Protein kinase RAD53; b 1.0 1 1 96.8 11.3 82 704-791 36-123 (127)
3 1gxc_A CHK2, CDS1, serine/thre 1.0 1 1 96.0 10.4 97 688-787 29-140 (149)
4 3va4_A Mediator of DNA damage 1.0 1 1 94.3 9.1 96 686-788 24-126 (132)
5 2csw_A Ubiquitin ligase protei 1.0 1 1 94.2 6.6 93 699-794 31-131 (145)
6 2pie_A E3 ubiquitin-protein li 1.0 1 1 94.2 10.2 95 698-795 21-124 (138)
7 2ff4_A Probable regulatory pro 1.0 1 1 93.9 11.8 95 686-790 286-383 (388)
8 2jpe_A Nuclear inhibitor of pr 1.0 1 1 93.7 5.0 94 689-788 37-135 (140)
9 1lgp_A Cell cycle checkpoint p 1.0 1 1 93.0 8.4 95 687-787 2-110 (116)
10 2kfu_A RV1827 PThr 22; FHA dom 1.0 1 1 92.9 9.7 93 686-789 55-150 (162)
No 1
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=1.00 E-value=1 Score=97.86 Aligned_cols=86 Identities=20% Similarity=0.261 Sum_probs=74.0
Q ss_pred CCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECCCCCEEECCEECCCCCCCCCCCCCEEEECCE-
Q ss_conf 6908977999999831004898997500021002225489959999523497597867719999312699993788690-
Q 003565 703 KPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGL- 781 (810)
Q Consensus 703 s~eVtIGRsT~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlGKngI~VNGk~I~~G~~~~L~sgsLIEIggi- 781 (810)
+..++|||... .||-|. ..+.|||+||.|.++.++.|+|+.+++||+||||+++..+..+.|.+|++|.||..
T Consensus 63 ~~~~~IGR~~~---~di~l~---d~~~vSr~Ha~I~~~~~g~~~l~DlS~NGT~vNg~~i~~~~~~~L~~GD~I~iG~~~ 136 (164)
T 1g3g_A 63 KKVWTFGRNPA---CDYHLG---NISRLSNKHFQILLGEDGNLLLNDISTNGTWLNGQKVEKNSNQLLSQGDEITVGVGV 136 (164)
T ss_dssp CEEEEEESSSS---SSEECC---CCTTTTSSCEEEEECSTTCEEEEECCSSCEEETTEEECTTEEEECCTTCEEEESCSS
T ss_pred CCCEEECCCCC---CCEEEC---CCCCCCHHHEEEEECCCCCEEEEECCCCCEEECCEECCCCCCEECCCCCEEEECCCC
T ss_conf 77389789999---998958---967858337799988899899998898982899999589974691899999989988
Q ss_pred -----EEEEEECHHHHHH
Q ss_conf -----8999929476999
Q 003565 782 -----AFIFETNQTCVKR 794 (810)
Q Consensus 782 -----~fiFllN~~lV~~ 794 (810)
+|+|.++......
T Consensus 137 ~~~~~~f~~~~~~~~~~~ 154 (164)
T 1g3g_A 137 ESDILSLVIFINDKFKQC 154 (164)
T ss_dssp TTSCEEEEEEECHHHHHH
T ss_pred CCCCEEEEEEECCHHHHH
T ss_conf 877489999958522357
No 2
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=1.00 E-value=1 Score=96.81 Aligned_cols=82 Identities=20% Similarity=0.270 Sum_probs=71.4
Q ss_pred CEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECCCCCEEECCEECCCCCCCCCCCCCEEEECCE--
Q ss_conf 908977999999831004898997500021002225489959999523497597867719999312699993788690--
Q 003565 704 PEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGL-- 781 (810)
Q Consensus 704 ~eVtIGRsT~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlGKngI~VNGk~I~~G~~~~L~sgsLIEIggi-- 781 (810)
..++|||... .||-|. ..+.|||+||.|.++.++.|+|+.+++||+||||+++.+++.+.|.+|++|.||..
T Consensus 36 ~~~~IGR~~~---~di~l~---~~~~vSr~Ha~i~~~~~g~~~l~DlS~NGT~vNg~~l~~~~~~~L~~Gd~I~lG~~~~ 109 (127)
T 1g6g_A 36 KVWTFGRNPA---CDYHLG---NISRLSNKHFQILLGEDGNLLLNDISTNGTWLNGQKVEKNSNQLLSQGDEITVGVGVE 109 (127)
T ss_dssp EEEEEESSTT---SSEECC---SCTTSCSSCEEEEECTTSCEEEEECCSSCCEETTEECCTTCCEECCTTCEEEECTTSG
T ss_pred CCEEECCCCC---CCEEEC---CCCCCCHHHEEEEECCCCCEEEEECCCCCEEECCEECCCCCEEECCCCCEEEECCCCC
T ss_conf 8789799999---899968---9778984485999888992999989859829999994899748859999999898766
Q ss_pred ----EEEEEECHHH
Q ss_conf ----8999929476
Q 003565 782 ----AFIFETNQTC 791 (810)
Q Consensus 782 ----~fiFllN~~l 791 (810)
+|+|.+|...
T Consensus 110 ~~~i~f~~~~~~~~ 123 (127)
T 1g6g_A 110 SDILSLVIFINDKF 123 (127)
T ss_dssp GGCEEEEEEECHHH
T ss_pred CCEEEEEEEECCHH
T ss_conf 75499999948264
No 3
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=1.00 E-value=1 Score=96.00 Aligned_cols=97 Identities=13% Similarity=0.146 Sum_probs=75.5
Q ss_pred CEEEEE---ECCEEEEECCCEEEECCCCCCCCCCEECCC-----CCCCCCCHHHCEEEEECCCC----CEEEEECCCCCE
Q ss_conf 139998---443057510690897799999983100489-----89975000210022254899----599995234975
Q 003565 688 AFAILY---GRHSKHYIKKPEVLLGRATEDVVVDIDLGR-----EGRTNKISRRQAMINMDEAG----SFHLKNLGKCPI 755 (810)
Q Consensus 688 AlAvL~---Gr~~~YyIrs~eVtIGRsT~~~~VDIDLs~-----EGpa~kISRrQA~Ikl~~dg----~F~L~NlGKngI 755 (810)
.+|.|. +..-.|.+.+..++|||.. ..||-|.- ......|||+||.|.+..++ .|+|+.+.+||+
T Consensus 29 ~w~~L~~~~~~~~~i~L~~~~~~IGR~~---~~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D~StNGT 105 (149)
T 1gxc_A 29 PWARLWALQDGFANLECVNDNYWFGRDK---SCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGT 105 (149)
T ss_dssp CCEEEEECSTTCCCEEECSSEEEEESST---TCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEECCSSCE
T ss_pred EEEEEEECCCCCCEEEECCCCEEECCCC---CCCEEECCCCCCCCCCCCCCCHHHEEEEEECCCCCEEEEEEEECCCCCE
T ss_conf 4699998279976699779888956899---8898978853345455785950154999989978605799999998986
Q ss_pred EECCEECCCCCCCCCCCCCEEEECC---EEEEEEE
Q ss_conf 9786771999931269999378869---0899992
Q 003565 756 LVNNKEVPPRQSQGLGSSCLIEIRG---LAFIFET 787 (810)
Q Consensus 756 ~VNGk~I~~G~~~~L~sgsLIEIgg---i~fiFll 787 (810)
||||+++.++..+.|.+|++|.||. ..|+|+-
T Consensus 106 ~VNg~~i~~~~~~~L~~GD~I~lG~~~~~~f~f~d 140 (149)
T 1gxc_A 106 FVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFD 140 (149)
T ss_dssp EETTEECCTTCEEECCTTEEEEESSTTCEEEEEEE
T ss_pred EECCEECCCCCEEECCCCCEEEECCCCCEEEEEEE
T ss_conf 99999978998388889999998788774999997
No 4
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=1.00 E-value=1 Score=94.33 Aligned_cols=96 Identities=19% Similarity=0.294 Sum_probs=79.6
Q ss_pred CCCEEEEEECC---EEEEECCCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECC-CCCEEEEECC-CCCEEECCE
Q ss_conf 86139998443---057510690897799999983100489899750002100222548-9959999523-497597867
Q 003565 686 HGAFAILYGRH---SKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDE-AGSFHLKNLG-KCPILVNNK 760 (810)
Q Consensus 686 ~~AlAvL~Gr~---~~YyIrs~eVtIGRsT~~~~VDIDLs~EGpa~kISRrQA~Ikl~~-dg~F~L~NlG-KngI~VNGk 760 (810)
.+.|-++.|.. .+|.+...+++|||... .||-| +...|||+||.|.++. ++.|+|+.+| +||+||||+
T Consensus 24 ~g~L~v~~g~~~~g~~~~L~~~~~~IGR~~~---~di~l----~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~ 96 (132)
T 3va4_A 24 IGQLRLFSGTHGPERDFPLYLGKNVVGRSPD---CSVAL----PFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKP 96 (132)
T ss_dssp SEEEEECCBTTBSCEEEEECSEEEEEESSTT---SSEEC----CCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTT
T ss_pred CEEEEEEECCCCCCEEEEECCCCEEECCCCC---CCEEE----CCCCCCHHHEEEEEECCCCEEEEEECCCCCCEEECCE
T ss_conf 6899999699988669998999989745889---98896----8988675488999986899899998999898699999
Q ss_pred E--CCCCCCCCCCCCCEEEECCEEEEEEEC
Q ss_conf 7--199993126999937886908999929
Q 003565 761 E--VPPRQSQGLGSSCLIEIRGLAFIFETN 788 (810)
Q Consensus 761 ~--I~~G~~~~L~sgsLIEIggi~fiFllN 788 (810)
+ +.++..+.|.+|++|.||+..|.|..-
T Consensus 97 ~i~l~~~~~~~L~~GD~I~lG~~~l~f~~~ 126 (132)
T 3va4_A 97 PRVLPPGVSHRLRDQELILFADFPCQYHRL 126 (132)
T ss_dssp TEEECTTCCEECCTTCEEEETTEEEEEEEC
T ss_pred ECCCCCCCEEECCCCCEEEECCEEEEEEEC
T ss_conf 941689987898999999999999999989
No 5
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=1.00 E-value=1 Score=94.24 Aligned_cols=93 Identities=15% Similarity=0.171 Sum_probs=72.6
Q ss_pred EEECCCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECC-CCCEEECCEECCCCCCCCCCCCCEEE
Q ss_conf 75106908977999999831004898997500021002225489959999523-49759786771999931269999378
Q 003565 699 HYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEVPPRQSQGLGSSCLIE 777 (810)
Q Consensus 699 YyIrs~eVtIGRsT~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlG-KngI~VNGk~I~~G~~~~L~sgsLIE 777 (810)
++..+.+++|||.. ..||-|.-......|||+||.|.++.++.|+|+.+| +||+||||+++.+++.+.|.++++|.
T Consensus 31 ~l~~~~~~~IGR~~---~~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~NGT~vNg~~i~~~~~~~L~~GD~I~ 107 (145)
T 2csw_A 31 LLEDGCEVTVGRGF---GVTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQ 107 (145)
T ss_dssp ECCTTCCEEEESST---TSSEECCCSSCGGGSCTTCEEEEECTTSCEEEEBSSCSSCEEESSCBCCBTCCEECCSSCCEE
T ss_pred EECCCCCEEECCCC---CCCEEECCCCCCCCCCHHHEEEEECCCCEEEEEECCCCCCEEECCEECCCCCCEECCCCCEEE
T ss_conf 94799818977999---999897898767879756859999479919999898998758999997899627889999999
Q ss_pred ECC-------EEEEEEECHHHHHH
Q ss_conf 869-------08999929476999
Q 003565 778 IRG-------LAFIFETNQTCVKR 794 (810)
Q Consensus 778 Igg-------i~fiFllN~~lV~~ 794 (810)
||. +.|.|.+..+....
T Consensus 108 iG~~~~~g~~~~f~~~~~~~~~~~ 131 (145)
T 2csw_A 108 LGVPLENKENAEYEYEVTEEDWET 131 (145)
T ss_dssp ESCCCTTCSSCSCCCCEEEEEHHH
T ss_pred ECCCCCCCCEEEEEEEECCCCHHH
T ss_conf 898888883089999964645311
No 6
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=1.00 E-value=1 Score=94.17 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=76.1
Q ss_pred EEEEC-CCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECC-CCCEEECCEECCCCCCCCCCCCCE
Q ss_conf 57510-6908977999999831004898997500021002225489959999523-497597867719999312699993
Q 003565 698 KHYIK-KPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEVPPRQSQGLGSSCL 775 (810)
Q Consensus 698 ~YyIr-s~eVtIGRsT~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlG-KngI~VNGk~I~~G~~~~L~sgsL 775 (810)
+|.+. ..+++|||.. ..||-|.-......|||+||.|.+..++.|+|+.+| +||+||||+++.++..+.|.+|++
T Consensus 21 ~~~l~~~~~~~IGR~~---~~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~NGT~vNg~~l~~~~~~~L~~GD~ 97 (138)
T 2pie_A 21 WLLLEDGCEVTVGRGF---GVTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDY 97 (138)
T ss_dssp BEEECTTCCEEEESSS---SSSEECCCSSCTTSSCSSCEEEEECTTSCEEEEECSCSSCEEETTEECCTTCCEECCTTCE
T ss_pred EEEECCCCEEEECCCC---CCCEEECCCCCCCCCCHHHEEEEECCCCCEEEEECCCCCCEEECCEECCCCCCEECCCCCE
T ss_conf 8996699818989999---9998957987677798669399985798399998979987699999958998478799999
Q ss_pred EEECC-------EEEEEEECHHHHHHH
Q ss_conf 78869-------089999294769999
Q 003565 776 IEIRG-------LAFIFETNQTCVKRY 795 (810)
Q Consensus 776 IEIgg-------i~fiFllN~~lV~~~ 795 (810)
|.||. +.|.|....+.....
T Consensus 98 I~lG~~~~~~~~~~f~~~~~~~~~~~~ 124 (138)
T 2pie_A 98 IQLGVPLENKENAEYEYEVTEEDWETI 124 (138)
T ss_dssp EEESCCCTTCSSCSEEEEEEEEEHHHH
T ss_pred EEECCCCCCCCEEEEEEEECCHHHHHH
T ss_conf 998788889940899999631044341
No 7
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=1.00 E-value=1 Score=93.93 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=78.2
Q ss_pred CCCEEEEEE--CCEEEEECCCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECC-CCCEEECCEEC
Q ss_conf 861399984--430575106908977999999831004898997500021002225489959999523-49759786771
Q 003565 686 HGAFAILYG--RHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEV 762 (810)
Q Consensus 686 ~~AlAvL~G--r~~~YyIrs~eVtIGRsT~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlG-KngI~VNGk~I 762 (810)
.+..+.|.. ...+|.+.+..++|||... .||-| +...|||+||.|.+. ++.|+|+.+| +||+||||+++
T Consensus 286 ~~~~~~l~~~~~g~~~~l~~~~~~iGR~~~---~di~l----~~~~vSr~Ha~i~~~-~~~~~l~Dl~S~nGt~vng~~i 357 (388)
T 2ff4_A 286 QQAVAYLHDIASGRGYPLQAAATRIGRLHD---NDIVL----DSANVSRHHAVIVDT-GTNYVINDLRSSNGVHVQHERI 357 (388)
T ss_dssp SBCCCEEEETTTCCEEECCSSEEEEESSTT---SSEEC----CCTTSCTTCEEEEEC-SSCEEEEECSCSSCCEETTEEC
T ss_pred CCCEEEEEECCCCCEEEECCCCEEEECCCC---CEEEE----CCCCCCHHHEEEEEE-CCEEEEEECCCCCCEEECCEEC
T ss_conf 887389998799958998998879850898---85997----887649647499998-9989999897989758999997
Q ss_pred CCCCCCCCCCCCEEEECCEEEEEEECHH
Q ss_conf 9999312699993788690899992947
Q 003565 763 PPRQSQGLGSSCLIEIRGLAFIFETNQT 790 (810)
Q Consensus 763 ~~G~~~~L~sgsLIEIggi~fiFllN~~ 790 (810)
. ..+.|.+|++|.||...|.|..+..
T Consensus 358 ~--~~~~L~~gd~i~~G~~~~~~~~~~~ 383 (388)
T 2ff4_A 358 R--SAVTLNDGDHIRICDHEFTFQISAG 383 (388)
T ss_dssp S--SEEEECTTCEEEETTEEEEEECSCC
T ss_pred C--CCEECCCCCEEEECCEEEEEEECCC
T ss_conf 8--9458799999999998999995798
No 8
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=1.00 E-value=1 Score=93.67 Aligned_cols=94 Identities=15% Similarity=0.240 Sum_probs=74.8
Q ss_pred EEEEEECC--EEEEECCC-EEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECC-CCCEEEEECC-CCCEEECCEECC
Q ss_conf 39998443--05751069-0897799999983100489899750002100222548-9959999523-497597867719
Q 003565 689 FAILYGRH--SKHYIKKP-EVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDE-AGSFHLKNLG-KCPILVNNKEVP 763 (810)
Q Consensus 689 lAvL~Gr~--~~YyIrs~-eVtIGRsT~~~~VDIDLs~EGpa~kISRrQA~Ikl~~-dg~F~L~NlG-KngI~VNGk~I~ 763 (810)
|-++.|.. -+|.+... .++|||.... .||-| ....|||+||.|.++. ++.|+|+.+| +||+||||+++.
T Consensus 37 L~v~~g~~~g~~~~l~~~~~~~IGR~~~~--~di~l----~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~vNg~~l~ 110 (140)
T 2jpe_A 37 LDVVKGDKLIEKLIIDEKKYYLFGRNPDL--CDFTI----DHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLE 110 (140)
T ss_dssp EEEESSSSEEEEECCSSCSBCCBSSCTTT--SSSCC----CCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEESSSCEEC
T ss_pred EEEECCCCCCEEEEECCCCEEEECCCCCC--CCEEE----CCCCCCHHHEEEEEECCCCCEEEEECCCCCCEEECCEECC
T ss_conf 99983997513899689983996689766--89893----8989682353999988889599998989998389999977
Q ss_pred CCCCCCCCCCCEEEECCEEEEEEEC
Q ss_conf 9993126999937886908999929
Q 003565 764 PRQSQGLGSSCLIEIRGLAFIFETN 788 (810)
Q Consensus 764 ~G~~~~L~sgsLIEIggi~fiFllN 788 (810)
++..+.|.+|++|.||...+.|.+.
T Consensus 111 ~~~~~~L~~gd~i~~G~~~~~f~~~ 135 (140)
T 2jpe_A 111 PHKPQQIPIDSTVSFGASTRAYTLR 135 (140)
T ss_dssp SSSCCEECTTCCBBCSSCCCCBCCB
T ss_pred CCCCEECCCCCEEEECCCEEEEEEE
T ss_conf 9953797899999989964899995
No 9
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=1.00 E-value=1 Score=93.02 Aligned_cols=95 Identities=20% Similarity=0.319 Sum_probs=76.7
Q ss_pred CCEEEEEEC-----CEEEEECCCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECC-CCCEEEEECCCCCEEECCE
Q ss_conf 613999844-----3057510690897799999983100489899750002100222548-9959999523497597867
Q 003565 687 GAFAILYGR-----HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDE-AGSFHLKNLGKCPILVNNK 760 (810)
Q Consensus 687 ~AlAvL~Gr-----~~~YyIrs~eVtIGRsT~~~~VDIDLs~EGpa~kISRrQA~Ikl~~-dg~F~L~NlGKngI~VNGk 760 (810)
.++|+|... ...|.+.+.+++|||.. ..||-| .....|||+||.|.++. ++.|+|+..++||+||||+
T Consensus 2 ~~wg~L~~~~~~~~~~~~~l~~~~~~iGR~~---~~di~l---~~~~~vSr~Ha~i~~~~~~~~~~l~D~S~NGt~vng~ 75 (116)
T 1lgp_A 2 QPWGRLLRLGAEEGEPHVLLRKREWTIGRRR---GCDLSF---PSNKLVSGDHCRIVVDEKSGQVTLEDTSTSGTVINKL 75 (116)
T ss_dssp CCCEEECCTTCCSSSCCEEECSSEEEEESST---TSSEEC---TTCTTSCTTCEEEEECTTTCCEEEEECSSSCCCCCCC
T ss_pred CCEEEEEEECCCCCCCEEEECCCCEEECCCC---CCCEEE---CCCCCCCHHHEEEEEECCCCEEEEEECCCCCCEECCE
T ss_conf 8779999947988766899899888978997---888894---7999978427399998889819999899298579999
Q ss_pred ECCCCCCCCCCCCCEEEECC--------EEEEEEE
Q ss_conf 71999931269999378869--------0899992
Q 003565 761 EVPPRQSQGLGSSCLIEIRG--------LAFIFET 787 (810)
Q Consensus 761 ~I~~G~~~~L~sgsLIEIgg--------i~fiFll 787 (810)
++.++..+.|.+|++|.||. +.|+|..
T Consensus 76 ~l~~~~~~~L~~GD~i~~G~~~~~~~~~~~f~f~~ 110 (116)
T 1lgp_A 76 KVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYES 110 (116)
T ss_dssp CCCCSSCCCCCTTCEEEEECCSSCGGGCEEEECCC
T ss_pred ECCCCCCEECCCCCEEEEECCCCCCCCEEEEEEEC
T ss_conf 95799718988999999945688888509999971
No 10
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=1.00 E-value=1 Score=92.88 Aligned_cols=93 Identities=23% Similarity=0.333 Sum_probs=77.3
Q ss_pred CCCEEEEEEC--CEEEEECCCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECC-CCCEEECCEEC
Q ss_conf 8613999844--30575106908977999999831004898997500021002225489959999523-49759786771
Q 003565 686 HGAFAILYGR--HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEV 762 (810)
Q Consensus 686 ~~AlAvL~Gr--~~~YyIrs~eVtIGRsT~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlG-KngI~VNGk~I 762 (810)
...|-++.|. ..+|.+.+..++|||... .||-| ....|||+||.|.+. ++.|+|+.+| +||+||||+++
T Consensus 55 ~~~L~v~~G~~~g~~~~L~~~~~~IGR~~~---~di~l----~d~~VSr~HA~I~~~-~~~~~l~DlgS~NGT~VNg~~i 126 (162)
T 2kfu_A 55 SALLVVKRGPNAGSRFLLDQAITSAGRHPD---SDIFL----DDVTVSRRHAEFRLE-NNEFNVVDVGSLNGTYVNREPV 126 (162)
T ss_dssp CCEEEEEESTTCSCEEETTSSEEEEESCSS---SSEES----TTTSSSSCSEEEEEE-TTEEEEECCCCSSCEEETTBCC
T ss_pred CEEEEEEECCCCCEEEEECCCCEEECCCCC---CCEEE----CCCCCCHHHEEEEEE-CCEEEEEECCCCCCEEECCEEC
T ss_conf 579999838999729997898889778888---88897----999828433899998-9999999899878758999986
Q ss_pred CCCCCCCCCCCCEEEECCEEEEEEECH
Q ss_conf 999931269999378869089999294
Q 003565 763 PPRQSQGLGSSCLIEIRGLAFIFETNQ 789 (810)
Q Consensus 763 ~~G~~~~L~sgsLIEIggi~fiFllN~ 789 (810)
. .+.|.+|++|.||..+|.|....
T Consensus 127 ~---~~~L~~GD~I~iG~~~l~f~~~~ 150 (162)
T 2kfu_A 127 D---SAVLANGDEVQIGKFRLVFLTGP 150 (162)
T ss_dssp S---EEECCSSCEEEETTEEEEEECSC
T ss_pred C---EEECCCCCEEEECCEEEEEEECC
T ss_conf 4---59999999999999999998587
Done!