BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003567
(810 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99L90|MCRS1_MOUSE Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1
Length = 462
Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 10/175 (5%)
Query: 627 DDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY--MQRAIL 684
D V FSD E +I D L + E E++ +R I +LEQ H + + +I
Sbjct: 276 DQVLNFSDAEDLIDDSKLKDMRDEVLEHELTVADRRQ-KREIRQLEQELHKWQVLVDSIT 334
Query: 685 SHGA-------FAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMI 737
G+ A+L GR ++ ++ E+ LGRAT+D +D+DL EG KISR+Q +I
Sbjct: 335 GMGSPDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVI 394
Query: 738 NMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 792
+ G F + N G+ PI ++ + V L ++ ++EI L F+F NQ +
Sbjct: 395 KLKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449
>sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1 OS=Homo sapiens GN=MCRS1 PE=1 SV=1
Length = 462
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 627 DDVPYFSDIEAMILDMDLDPDDQGIYEQEVSKYQHEDTRRAIIRLEQGAHSY-------- 678
D V FSD E +I D L + E E+ +R I +LEQ H +
Sbjct: 276 DQVLNFSDAEDLIDDSKLKDMRDEVLEHELMVADRRQ-KREIRQLEQELHKWQVLVDSIT 334
Query: 679 -MQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMI 737
M + A+L GR ++ ++ E+ LGRAT+D +D+DL EG KISR+Q +I
Sbjct: 335 GMSSPDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVI 394
Query: 738 NMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 792
+ G F + N G+ PI ++ + V L ++ ++EI L F+F NQ +
Sbjct: 395 KLKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449
>sp|P40466|FKH1_YEAST Fork head protein homolog 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FKH1 PE=1 SV=1
Length = 484
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 688 AFAILYGRHSKHYIKKPEVLLGRATED---------VV---VDIDLGREGRTNKISRRQA 735
A+A + G +Y++K EV +GR T+ VV +DIDL G +SR+ A
Sbjct: 58 AYAKIAGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKKNIDIDL---GPAKIVSRKHA 114
Query: 736 MINMD-EAGSFHLKNLGKCPILVNNKEVPP---RQSQGLGSSCLIEIRGLAFIF 785
I + E+GS+ L+ G+ VN + +P L S C+I+I G+ IF
Sbjct: 115 AIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIF 168
>sp|O60129|FKH2_SCHPO Fork head protein homolog 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fkh2 PE=1 SV=1
Length = 642
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 688 AFAILYGRHSKHYIKKPEVLLGR---------ATEDV-VVDIDLGREGRTNKISRRQAMI 737
A+A G +Y+KK ++LGR ED+ V+D++ G + +SR+ A++
Sbjct: 78 AYAKFAGSTWTYYVKKIRIILGREPANPSPKGKNEDLEVIDMNF---GPSKVVSRKHAVV 134
Query: 738 NMD-EAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIF 785
D + +++ G+ I V+ K ++ L S ++E+ GL +F
Sbjct: 135 EYDLDDQTWNCSVYGRNGIKVDGKLFKNGETVKLTSGSILEVAGLQMMF 183
>sp|P42128|FOXK1_MOUSE Forkhead box protein K1 OS=Mus musculus GN=Foxk1 PE=1 SV=2
Length = 719
Score = 38.1 bits (87), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 688 AFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHL 747
A A L GR + +++P V +GR + VD+ + G ++ ISRR ++ E F+L
Sbjct: 91 ALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSM---GLSSFISRRHLQLSFQEP-HFYL 146
Query: 748 KNLGKCPILVNN 759
+ LGK + V+
Sbjct: 147 RCLGKNGVFVDG 158
>sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1
Length = 733
Score = 38.1 bits (87), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 688 AFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHL 747
A A L GR + +++P V +GR + VD+ + G ++ ISRR ++ E F+L
Sbjct: 105 ALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSM---GLSSFISRRHLQLSFQEP-HFYL 160
Query: 748 KNLGKCPILVNN 759
+ LGK + V+
Sbjct: 161 RCLGKNGVFVDG 172
>sp|Q5R9A7|GP155_PONAB Integral membrane protein GPR155 OS=Pongo abelii GN=GPR155 PE=2
SV=1
Length = 872
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 599 GSLHIPDAEPIMNPSTTEPEDPSVESDDDDV 629
G LH P EPI N ST+EP PS E ++ V
Sbjct: 602 GELHCPSIEPIANTSTSEPVIPSFEKNNHCV 632
>sp|Q7Z3F1|GP155_HUMAN Integral membrane protein GPR155 OS=Homo sapiens GN=GPR155 PE=2
SV=2
Length = 870
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 599 GSLHIPDAEPIMNPSTTEPEDPSVESDDDDV 629
G LH P EPI N ST+EP PS E ++ V
Sbjct: 600 GELHCPSIEPIANTSTSEPVIPSFEKNNHCV 630
>sp|O34433|YOBO_BACSU Putative phage-related protein YobO OS=Bacillus subtilis (strain
168) GN=yobO PE=4 SV=1
Length = 806
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 17/134 (12%)
Query: 332 KEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVES----VENV 387
KE +DK YY LS + N A +P T + N V + V+ +
Sbjct: 64 KERLDKEYYRLLSKITREVNVADFGAVPDGRDNTEAFRKAIGNGRVKVHVPAGEYLVQGI 123
Query: 388 QLPSPATVSDPQFPEQNDGIMICTLNTEDPE---IPCNDDAFLPN-NLLPSSVSI----A 439
+LPS T+ Q GI + L+ + P + NDD N N+ +S+ +
Sbjct: 124 KLPSWTTIVG-----QGKGITVIKLHEDTPAHEWVITNDDYQNGNRNIFVQGMSLDWNPS 178
Query: 440 KRQNFKDAGNPFSS 453
++ ++ G FSS
Sbjct: 179 RQCGVRNPGGQFSS 192
>sp|Q9HJM5|SYE_THEAC Glutamate--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=gltX PE=3 SV=2
Length = 548
Score = 33.5 bits (75), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 732 RRQAMIN-MDEAGSFHLKN-LGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQ 789
RR A+IN G LK+ +GK + + PR ++ + S + E+ ++ +E +
Sbjct: 7 RRIALINAYQHEGKADLKSVMGKVMAEIPDLRRDPRSAREMVSRIVDEVNSMS-AYEIRE 65
Query: 790 TCVKRYLDSIMKENRTHEHQ 809
T RY SI KE + EH+
Sbjct: 66 TVETRYTSSIRKEKKVEEHR 85
>sp|Q4JXD1|Y374_CORJK UPF0678 fatty acid-binding protein-like protein jk0374
OS=Corynebacterium jeikeium (strain K411) GN=jk0374 PE=3
SV=1
Length = 213
Score = 33.5 bits (75), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 103 KFPDIPM-DDDASCRDGPTLH-------------RFHGGFDHPGEEDFSMQQGEMHEEIP 148
+F D+P+ DD A+ R GP LH R G PGEE+F+ Q +
Sbjct: 34 EFGDMPIPDDTANLRKGPNLHDGLLALLPLIGVWRGQGQAAPPGEEEFTFGQQVV---FA 90
Query: 149 HIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEAN 185
H E S+ R+ + G P ++P+ E+ + N
Sbjct: 91 HDGENRISYDSRTWRMDDDGKPTEIPDRRESGFLRIN 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 330,735,184
Number of Sequences: 539616
Number of extensions: 15589282
Number of successful extensions: 27568
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 27554
Number of HSP's gapped (non-prelim): 44
length of query: 810
length of database: 191,569,459
effective HSP length: 126
effective length of query: 684
effective length of database: 123,577,843
effective search space: 84527244612
effective search space used: 84527244612
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)