Query 003570
Match_columns 810
No_of_seqs 47 out of 49
Neff 3.0
Searched_HMMs 29240
Date Tue Mar 26 17:59:19 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003570.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1619-1623//hhsearch_pdb/003570hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i84_S Smooth muscle myosin he 1.0 1 1 57.0 13.2 17 125-141 386-402 (1184)
2 1i84_S Smooth muscle myosin he 1.0 1 1 55.5 9.9 19 50-68 533-551 (1184)
3 1c1g_A Tropomyosin; contractIl 1.0 1 1 33.8 34.9 40 279-318 2-41 (284)
4 2dfs_A Myosin-5A; myosin-V, in 1.0 1 1 31.1 17.1 26 649-674 1028-1053(1080)
5 3vkg_A Dynein heavy chain, cyt 1.0 1 1 28.9 25.8 197 343-554 1896-2104(3245)
6 3ghg_A Fibrinogen alpha chain; 1.0 1 1 27.7 12.8 51 349-410 113-163 (562)
7 3o0z_A RHO-associated protein 1.0 1 1 27.6 19.1 112 299-418 50-161 (168)
8 2dfs_A Myosin-5A; myosin-V, in 1.0 1 1 26.8 21.0 62 583-647 986-1047(1080)
9 3i00_A HIP-I, huntingtin-inter 1.0 1 1 25.9 9.4 102 304-430 15-116 (120)
10 3na7_A HP0958; flagellar bioge 1.0 1 1 25.4 21.7 165 225-422 7-173 (256)
No 1
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=56.95 Aligned_cols=17 Identities=6% Similarity=0.237 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 43431888999999999
Q 003570 125 QVELSELELLSLRKQVA 141 (810)
Q Consensus 125 q~e~selELQtLRKQi~ 141 (810)
-+.++.++-..|.+-+.
T Consensus 386 ~a~lLg~~~~~l~~~l~ 402 (1184)
T 1i84_S 386 VCHLMGINVTDFTRSIL 402 (1184)
T ss_dssp HHHHTTSCHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHC
T ss_conf 99997989999999755
No 2
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=55.50 Aligned_cols=19 Identities=16% Similarity=0.155 Sum_probs=10.0
Q ss_pred CCCCCCCCCCCCCCCCCCC
Q ss_conf 9876665535888987754
Q 003570 50 PASLQSPLRQNSVPQQGTV 68 (810)
Q Consensus 50 ~~sf~s~~~~~s~p~~~~v 68 (810)
|.+.++.+--.++-|+++-
T Consensus 533 ~~Gil~lLdee~~~p~~td 551 (1184)
T 1i84_S 533 PPGVLALLDEECWFPKATD 551 (1184)
T ss_dssp SCCHHHHHHHTTSCTTCCH
T ss_pred CCCCHHHHHHHHCCCCCCH
T ss_conf 9972122046518999976
No 3
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=1.00 E-value=1 Score=33.76 Aligned_cols=40 Identities=20% Similarity=0.186 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7799999875357887666279999999999998899976
Q 003570 279 DMLKQKIRDQGDEIQFFKKHAEDLEIYIKQLTEDCQVLEQ 318 (810)
Q Consensus 279 ~~LkqKI~DL~~Eie~ykkerEeLe~kieQL~~D~E~Lkq 318 (810)
..++.||.-+-.+++.+....+.|...+..+...+..+..
T Consensus 2 ~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 41 (284)
T 1c1g_A 2 DAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLED 41 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3789999998876888999999999999999988988899
No 4
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=1.00 E-value=1 Score=31.14 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78776688999999779987529998
Q 003570 649 EKLEKDNLAKQVFQLKDELQKKKEEI 674 (810)
Q Consensus 649 ee~EKe~l~kQv~qLk~eL~KKe~~~ 674 (810)
=+.|+.+|++|+..|.+.+.+.++..
T Consensus 1028 L~~e~~~L~qq~~~l~~~~~~~~~~~ 1053 (1080)
T 2dfs_A 1028 LKEQNTLLKTEKEELNRRIHDQAKEI 1053 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999988877
No 5
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=1.00 E-value=1 Score=28.92 Aligned_cols=197 Identities=14% Similarity=0.163 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23764999998889999999987698767657699999999999999999998789539999865179999978999999
Q 003570 343 ESLATIKELESQSERLEDKIKQQSEEYSESLISINELECQVKELKRELDKQAQEFEDDIDAVTHAKTEQEQRAIRAEEEL 422 (810)
Q Consensus 343 ~~~~~i~eLe~qve~LE~eLk~q~~efSesL~tI~eLE~qv~sLekEl~~Qaq~fe~Dldai~~~k~EQEqRAi~AEeaL 422 (810)
+++.-|.-+..=...--.++..+...+..-|--+.+...+|..|.++|..+...++ ++...|+++|
T Consensus 1896 syLeli~~y~~ll~~K~~el~~~~~rl~~GL~KL~et~~~V~~l~~~L~~~~~~L~--------------~k~~ea~~~l 1961 (3245)
T 3vkg_A 1896 HYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELD--------------VKNEQANQKL 1961 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHH
T ss_conf 99999999999999999999999999998899999999999999999999899999--------------9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Q ss_conf 997433433479999999888888633322318---9999998899---999866899999999869997554431---1
Q 003570 423 RKTRWKNTVTAERLQDEFRRLSVDMASKFDENE---KLAMKAMTEA---NEQRMQKAHLEEMLQKANDELSLIKDQ---N 493 (810)
Q Consensus 423 rKtR~~na~taErLQeEf~~LS~qmsSt~eeNE---klt~kA~~Ea---seLR~qk~~LEemLqk~neeL~~i~dq---~ 493 (810)
.++--... .|+.-+.+......++.-.-.+-. ..+.+.+.+| .-+|..-+.+|+.|..+.++|..+++. -
T Consensus 1962 ~~i~~~~~-~ae~~k~~v~~~~~~~~~~~~ei~~~k~~~e~dL~~A~Pa~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~l 2040 (3245)
T 3vkg_A 1962 KQMVQDQQ-AAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEKAEPTGPLREEVEQLENAANELKLKQDEIVATITAL 2040 (3245)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999-99999999999999999999999999999999986469998299999999999999999999999999999
Q ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q ss_conf 1218987688765799999999963110133467763099987---867999999999999987
Q 003570 494 GVKLQELSDQLEQKDKQIQKMYLELDHSSSQLIDEHKSEAQKH---EALSTEIHMLRTEIEKLR 554 (810)
Q Consensus 494 e~kl~eL~~qld~k~k~ie~m~~Ele~kS~qle~~kk~~ee~~---~a~s~EI~~Lk~eie~L~ 554 (810)
+.++..|..+.+..+...+.+-.+++.-...|+.+.+.-.... .-|++.+..|+..+.+|.
T Consensus 2041 e~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~~~l~~~~~~L~ 2104 (3245)
T 3vkg_A 2041 EKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTVV 2104 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999999999999999999999999998621131329999999999997252
No 6
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=1.00 E-value=1 Score=27.71 Aligned_cols=51 Identities=24% Similarity=0.263 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998889999999987698767657699999999999999999998789539999865179
Q 003570 349 KELESQSERLEDKIKQQSEEYSESLISINELECQVKELKRELDKQAQEFEDDIDAVTHAKTE 410 (810)
Q Consensus 349 ~eLe~qve~LE~eLk~q~~efSesL~tI~eLE~qv~sLekEl~~Qaq~fe~Dldai~~~k~E 410 (810)
.+|+-+++.|..++.+|- ..|..|++-|..+.. +.|++|.||++-.+.=..
T Consensus 113 ~ELRRrIqyLKekVdnQl-------snIrvLQsnLedq~~----kIQRLEvDIdiqirsCKg 163 (562)
T 3ghg_A 113 EDLRSRIEVLKRKVIEKV-------QHIQLLQKNVRAQLV----DMKRLEVDIDIKIRSCRG 163 (562)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999999-------999999999999999----999999999999976105
No 7
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=1.00 E-value=1 Score=27.60 Aligned_cols=112 Identities=13% Similarity=0.183 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999998899976323344588989997444566534237649999988899999999876987676576999
Q 003570 299 AEDLEIYIKQLTEDCQVLEQENQCLTSKLEKIQQQESMKSRECIESLATIKELESQSERLEDKIKQQSEEYSESLISINE 378 (810)
Q Consensus 299 rEeLe~kieQL~~D~E~LkqEN~~ls~kLEq~q~Qeql~~~EcS~~~~~i~eLe~qve~LE~eLk~q~~efSesL~tI~e 378 (810)
.-+|...+..|.-....|-++...|++-|++ --..|+---.+|.+|+++|..|..+|+......+-....-.-
T Consensus 50 ~rELq~~~~~L~~~k~~Leke~~~LQa~L~q-------Er~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~ 122 (168)
T 3o0z_A 50 NRELQERNRILENSKSQTDKDYYQLQAILEA-------ERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKE 122 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7899999999998899999999999999999-------998887777899999999999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999878953999986517999997899
Q 003570 379 LECQVKELKRELDKQAQEFEDDIDAVTHAKTEQEQRAIRA 418 (810)
Q Consensus 379 LE~qv~sLekEl~~Qaq~fe~Dldai~~~k~EQEqRAi~A 418 (810)
|.-.|..|+++-++..--+--+|-++ +.+.+||.++-++
T Consensus 123 L~Ekl~~lEKe~a~~eid~~~eLKal-Q~~~eqE~~~H~~ 161 (168)
T 3o0z_A 123 AQDMLNHSEKEKNNLEIDLNYKLKSL-QQRLEQEVNEHKV 161 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_conf 99998999989974047887779998-9899999998898
No 8
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=1.00 E-value=1 Score=26.78 Aligned_cols=62 Identities=19% Similarity=0.263 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 75444434357888987899999999999752026732488875379999999998998885564
Q 003570 583 IQKWNRERDDLEKKFASAKQEAAKAHEELISMRSLKGENEMLIGNLQAEVENLKVQQNKLQNSLI 647 (810)
Q Consensus 583 lq~~~~er~el~~~~a~~kkeae~~~~EL~~m~~~kdEkE~~i~~LqsEve~lk~Q~~~LK~sL~ 647 (810)
+..-..+..+|...+..+.+|-+...+....++ ++-+..+..|..+...|+-|-++|..-..
T Consensus 986 v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~---~~L~~kv~~L~~e~~~L~qq~~~l~~~~~ 1047 (1080)
T 2dfs_A 986 VLSLQEEIAKLRKELHQTQTEKKTIEEWADKYK---HETEQLVSELKEQNTLLKTEKEELNRRIH 1047 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999---99999999999999999999999999999
No 9
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=1.00 E-value=1 Score=25.93 Aligned_cols=102 Identities=20% Similarity=0.276 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999889997632334458898999744456653423764999998889999999987698767657699999999
Q 003570 304 IYIKQLTEDCQVLEQENQCLTSKLEKIQQQESMKSRECIESLATIKELESQSERLEDKIKQQSEEYSESLISINELECQV 383 (810)
Q Consensus 304 ~kieQL~~D~E~LkqEN~~ls~kLEq~q~Qeql~~~EcS~~~~~i~eLe~qve~LE~eLk~q~~efSesL~tI~eLE~qv 383 (810)
..|++|-.+.+.|+.+.-.| +.|. +..|.+|+++|..|+.+|..++..-...+.-.+.|..++
T Consensus 15 ~~Ie~Lkreie~lk~ele~l--~~E~---------------q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~ 77 (120)
T 3i00_A 15 HLIERLYREISGLKAQLENM--KTES---------------QRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAEL 77 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999--9998---------------899999999999999999999999999877789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999878953999986517999997899999999743343
Q 003570 384 KELKRELDKQAQEFEDDIDAVTHAKTEQEQRAIRAEEELRKTRWKNT 430 (810)
Q Consensus 384 ~sLekEl~~Qaq~fe~Dldai~~~k~EQEqRAi~AEeaLrKtR~~na 430 (810)
..+..- ..+-+.+.+--+|-|.||-.+|+-..|..-.|+
T Consensus 78 ~~l~~~--------~~~~~~~q~~~~e~E~kAqa~Eerf~KLKe~yt 116 (120)
T 3i00_A 78 DELRRQ--------REDTEKAQRSLSEIERKAQANEQRYSKLKEKYS 116 (120)
T ss_dssp HHHHTT--------CC-------------------------------
T ss_pred HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999988--------530288998999989888777999999999999
No 10
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=1.00 E-value=1 Score=25.38 Aligned_cols=165 Identities=12% Similarity=0.125 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999978899999876452200023555645444548999999851167135677999998753578876662799999
Q 003570 225 AELILAVKDLNEMLEQKNMEISSLSSKLEESKLVREDQLALEALAKERNKDKEVDMLKQKIRDQGDEIQFFKKHAEDLEI 304 (810)
Q Consensus 225 sELilAVqDLeeMLEqKn~EIs~ls~~~~e~~~~~edq~ale~Lvke~~~~~E~~~LkqKI~DL~~Eie~ykkerEeLe~ 304 (810)
...++.+|++|.-|..-...+..+.. ++..|+..+..+...+.......+++..
T Consensus 7 L~~L~~LQ~lD~~i~~l~~~~~~lp~--------------------------el~~le~~~~~l~~~~~~~~~~l~d~~~ 60 (256)
T 3na7_A 7 LKQLIEISHLDKEIDSLEPLIREKRK--------------------------DLDKALNDKEAKNKAILNLEEEKLALKL 60 (256)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999987589--------------------------9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999889997632334458898999744456--65342376499999888999999998769876765769999999
Q 003570 305 YIKQLTEDCQVLEQENQCLTSKLEKIQQQESMKS--RECIESLATIKELESQSERLEDKIKQQSEEYSESLISINELECQ 382 (810)
Q Consensus 305 kieQL~~D~E~LkqEN~~ls~kLEq~q~Qeql~~--~EcS~~~~~i~eLe~qve~LE~eLk~q~~efSesL~tI~eLE~q 382 (810)
.+..+..+-+.++. +.+..+.+..-.- -|..++..-|..++..+..+|.++.+.-...-..-..+..++..
T Consensus 61 ~~~~~e~~i~~~~~-------ri~~~~~~l~~v~~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~ 133 (256)
T 3na7_A 61 QVSKNEQTLQDTNA-------KIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKE 133 (256)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999978999999-------99999999872589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998789539999865179999978999999
Q 003570 383 VKELKRELDKQAQEFEDDIDAVTHAKTEQEQRAIRAEEEL 422 (810)
Q Consensus 383 v~sLekEl~~Qaq~fe~Dldai~~~k~EQEqRAi~AEeaL 422 (810)
+..+..++......+...+..+...-.....+.-.....+
T Consensus 134 l~~~~~~l~~~~~~~~~~~~e~~~e~~~l~~~r~~l~~~i 173 (256)
T 3na7_A 134 MLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKT 173 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999999999999999999999988569
Done!