Query 003571
Match_columns 810
No_of_seqs 185 out of 1215
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 18:14:22 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003571.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1619-1623//hhsearch_pdb/003571hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2eab_A Alpha-fucosidase; glyco 1.0 1 1 1373.6 62.9 734 9-800 14-898 (899)
2 2rdy_A BH0842 protein; PSI-II, 1.0 1 1 1369.6 80.1 766 12-802 2-795 (803)
3 1h54_A Maltose phosphorylase; 1.0 1 1 669.4 47.0 548 116-771 103-740 (754)
4 2okx_A Rhamnosidase B; alpha b 1.0 1 1 178.4 19.8 373 346-779 543-943 (956)
5 3cih_A Putative alpha-rhamnosi 1.0 1 1 88.9 22.8 305 467-806 386-737 (739)
6 3rrs_A Cellobiose phosphorylas 1.0 1 1 87.2 22.8 440 240-752 251-785 (822)
7 1v7w_A Chitobiose phosphorylas 1.0 1 1 84.5 37.2 608 14-751 12-762 (807)
8 3qde_A Cellobiose phosphorylas 1.0 1 1 82.2 26.3 442 239-752 245-772 (811)
9 1ulv_A Glucodextranase; GH fam 1.0 1 1 49.1 30.7 358 126-580 80-474 (1020)
10 2p0v_A Hypothetical protein BT 1.0 1 1 48.1 7.9 202 467-673 182-430 (489)
No 1
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=1.00 E-value=1 Score=1373.55 Aligned_cols=734 Identities=31% Similarity=0.559 Sum_probs=655.9
Q ss_pred CCCCCEEEECCCCC------------------CCC-CCCCCCCCCCEEECCCCCCCCEEEECCCCEECCCCCCCCC----
Q ss_conf 88985068658876------------------722-2243348951000028888244992145201289999999----
Q 003571 9 TTNPLKITFNGPAK------------------HFT-DAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTN---- 65 (810)
Q Consensus 9 ~~~~~~l~~~~Pa~------------------~w~-ealpiGNG~lGamv~G~~~~e~i~lne~tlWsg~~~~~~~---- 65 (810)
...+++|||++||+ .|+ ||||||||||||||||++..|+|||||+|||+|+|.++.+
T Consensus 14 ~~~~~~lwy~~Pa~~~~~~~~~~~~~~~~~~~~W~~~alPiGNGrlGamv~G~~~~E~i~lNe~tlWsG~p~~~~~~~~~ 93 (899)
T 2eab_A 14 TSKDDWLWYKQPASQTDATATAGGNYGNPDNNRWQQTTLPFGNGKIGGTVWGEVSRERVTFNEETLWTGGPGSSTSYNGG 93 (899)
T ss_dssp CTTSCEEEESSCGGGSCCCSCCCTTCCSHHHHHHHHHCEEEESSSEEEEECCCSSEEEEEEEETTCBCCSTTSSSSCCTT
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 56774388479876556544234445666445610156334688725860489874899982444187989777764454
Q ss_pred -----CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC----CCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEE
Q ss_conf -----98136689999999739978999999844199----998765454469981389886676882899753563899
Q 003571 66 -----PDAPKALSDVRSLVDSGQYAEATAASVKLFGH----PADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATAR 136 (810)
Q Consensus 66 -----~~~~~~l~~~r~~~~~g~~~~a~~l~~~~~g~----~~~~y~~lG~l~i~~~~~~~~~~~~~Y~R~LDl~~g~~~ 136 (810)
|.+++.|++||+++++|++.+ ++..++|. ..++|||+|+|.|+|......++ +|+|+|||.+|+++
T Consensus 94 n~~~~~~~~~~l~~ir~l~~~g~~~~---l~~~~~~~~~~~~~~~y~~~g~l~i~~~~~~~~~~--~Y~R~LDl~~a~~~ 168 (899)
T 2eab_A 94 NNETKGQNGATLRALNKQLANGAETV---NPGNLTGGENAAEQGNYLNWGDIYLDYGFNDTTVT--EYRRDLNLSKGKAD 168 (899)
T ss_dssp CCHHHHGGGHHHHHHHHHHHTTCSBC---CCTTCCCCCCHHHHCCBCCCEEEEEECCCSCCCCE--EEEEEEETTTTEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCHHH---HHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCC--CEEEEEECCCEEEE
T ss_conf 54567207788999999998878999---99985088766677664413147997467987766--74799871014899
Q ss_pred EEEEECCEEEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCE----EEECCCEEEEEEECCCCCCCCCCCCCC
Q ss_conf 9998799899999987359978999999089984499998357788870----220698699998449988999988899
Q 003571 137 VKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDNHS----YVNGNNQIIMEGRCPGKRIPPKANAND 212 (810)
Q Consensus 137 ~~~~~~g~~~~re~f~S~pd~vlv~~i~~~~~~~l~~~~~l~~~~~~~~----~~~~~~~l~~~g~~~~~~~~~~~~~~~ 212 (810)
|+|+.+|++|+|++|||+||+|||+||+++++++|+|+++|+++..... ...+++.++++|+.+.
T Consensus 169 ~~y~~~gv~y~re~f~S~pd~viv~~lta~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~l~l~g~~~~----------- 237 (899)
T 2eab_A 169 VTFKHDGVTYTREYFASNPDNVMVARLTASKAGKLNFNVSMPTNTNYSKTGETTTVKGDTLTVKGALGN----------- 237 (899)
T ss_dssp EEEEETTEEEEEEEEEETTTTEEEEEEEESSTTCEEEEEECCBCTTSCEEEEEEEEETTEEEEEEEETT-----------
T ss_pred EEEEECCEEEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCEEEEEEEECC-----------
T ss_conf 999979999999999966999899999818997479999825876566444224315998999999889-----------
Q ss_pred CCCCEEEEEEEEEEEECCCEEEEEEC---CCEEEEECCCEEEEEEEEEECCCCCCCCCCCCCC---CHHHHHHHHHHHHH
Q ss_conf 99940799999999908960399831---9908996793899999964068899999999999---94999999999856
Q 003571 213 DPKGIQFSAILEIKISDDRGTISALE---DKKLKVEGSDWAVLLLVASSSFDGPFINPSDSKK---DPTSESMSALQSIR 286 (810)
Q Consensus 213 ~~~g~~f~~~~~v~~~g~~G~~~~~~---~~~l~v~~a~~v~i~~~~~T~~~~~~~~~~~~~~---d~~~~~~~~l~~a~ 286 (810)
+++.|++.++|+.+| |+++... +++|.|++|++|+|++++.|+|+..+... ..+. ++.+.+.+.+.++.
T Consensus 238 --~g~~~~~~~~v~~~g--G~~~~~~~~~~~~l~v~~a~~v~l~~~~~T~y~~~~~~~-~~~~~~~~~~~~~~~~l~~a~ 312 (899)
T 2eab_A 238 --NGLLYNSQIKVVLDN--GEGTLSEGSDGASLKVSDAKAVTLYIAAATDYKQKYPSY-RTGETAAEVNTRVAKVVQDAA 312 (899)
T ss_dssp --TCCEEEEEEEEEEGG--GCSEEEECTTSSSEEEEEESEEEEEEEEEESBCCCTTTC-BCCCCHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEEEEEECC--CEEEEECCCCCCEEEEECCCEEEEEEEEEECCCCCCCCC-CCCCCCCCHHHHHHHHHHHHH
T ss_conf --984899999999579--449950477787699979949999999760566655655-676652118999999999987
Q ss_pred CCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC-----CCHHHHHHHHHHHHHHH
Q ss_conf 0999999999999999734232299658998764566766666899838887501489-----99589999999998987
Q 003571 287 NLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAERVKSFQTD-----EDPSLVELLFQFGRYLL 361 (810)
Q Consensus 287 ~~~y~~l~~~H~~~w~~lw~r~~i~l~~~~~~~~~~~~~~~~~~~~pt~~rl~~~~~~-----~d~~L~~~~f~~grYlL 361 (810)
.++|++|+++|++||+++|+|++|+|++++. .....+||++|+++|+.+ .|++|+++|||||||||
T Consensus 313 ~~gy~~Ll~~H~~~w~~lw~R~~l~L~~~~~---------~~~~~~~td~~l~~~~~~~~~~~~d~~L~~l~f~fgRYlL 383 (899)
T 2eab_A 313 NKGYTAVKKAHIDDHSAIYDRVKIDLGQSGH---------SSDGAVATDALLKAYQRGSATTAQKRELETLVYKYGRYLT 383 (899)
T ss_dssp HHCHHHHHHHHHHHHHHHHTTCEEESSCCCT---------TSTTCCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHHCEEEEEECCCCC---------CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 5799999999999999860714999678854---------3234688899999853045665543789999999999987
Q ss_pred HHCCCC-CCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 623899-99899973025------89999998998632233323112223799346459999999996798999999762
Q 003571 362 ISSSRP-GTQVANLQGIW------NEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNY 434 (810)
Q Consensus 362 isssR~-g~~P~~LqGlW------n~~~~~~W~g~yh~niN~qm~ywp~~~~nl~e~~~~l~~~~~~~l~~~r~~A~~~y 434 (810)
|||||+ +++|+||||+| |....|+|+|+||+|||+||||||++.+|+|||++||++|++++++.||++||++|
T Consensus 384 issSr~~g~lP~nLqGiWs~~~g~n~~~~p~W~g~y~~NiNtqmnywPa~~~nlpE~a~pLl~y~~~ll~~gr~~Ar~~y 463 (899)
T 2eab_A 384 IGSSRENSQLPSNLQGIWSVTAGDNAHGNTPWGSDFHMNVNLQMNYWPTYSANMGELAEPLIEYVEGLVKPGRVTAKVYA 463 (899)
T ss_dssp HHHCCTTCSSCCBTTBTCCCCCCSSTTSSSGGGGCEETTTHHHHHTSSTTTTTCGGGGHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 41689989999876463555567556678996743044123212324244257999999999999998799999999971
Q ss_pred CCC-------------CEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 997-------------5698301786777788999852223736789999999999864398999975208999999999
Q 003571 435 LAS-------------GWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASF 501 (810)
Q Consensus 435 G~~-------------G~~~~~~td~wg~~~p~~~~~~~~~~~~~~awla~~lw~yY~~T~D~~fL~~~~yP~l~~~A~F 501 (810)
|++ ||+.|+++++|+.++| +.++.|+.||++++|+|+|+|+||+||+|++|| +++||+|+++|+|
T Consensus 464 G~~ga~~~~~~~g~~~Gw~~~~~~~~w~~t~p-~~~~~w~~~~~~~aWla~~lweyy~yTgD~~fL-~~~yPlLkeaA~F 541 (899)
T 2eab_A 464 GAETTNPETTPIGEGEGYMAHTENTAYGWTAP-GQSFSWGWSPAAVPWILQNVYEAYEYSGDPALL-DRVYALLKEESHF 541 (899)
T ss_dssp CCCCSSTTTSCTTSSSCCCCCSEECTTCCCSC-CSSHHHHCCTTHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHH
T ss_conf 98655565555567678598501477666788-888752255762999999999999865889999-9889999999999
Q ss_pred HHH-HHCCCC---CCEEEECCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHCC-------------
Q ss_conf 988-520389---99199889988888767899985322-259189999999999999999999387-------------
Q 003571 502 LLD-WLIEGH---DGYLETNPSTSPEHEFIAPDGKLACV-SYSSTMDMAIIREVFSAIISAAEVLEK------------- 563 (810)
Q Consensus 502 ~~~-~l~~~~---~G~~~~~ps~sPE~~~~~~~g~~~~~-~~n~t~d~~~ir~ll~~~~~a~~~Lg~------------- 563 (810)
|++ ++++++ +|+|++.||+|||+.+ . ++|++|||+|++++|..+++++++|++
T Consensus 542 ~~d~~l~~~~~~~~G~~vi~ps~SPE~~~---------~~~~~~tydn~l~~~ll~~~i~aa~~Lg~~~~~~~~~~~~~~ 612 (899)
T 2eab_A 542 YVNYMLHKAGSSSGDRLTTGVAYSPEQGP---------LGTDGNTYESSLVWQMLNDAIEAAKAKGDPDGLVGNTTDCSA 612 (899)
T ss_dssp HHHHTCEECCGGGCSSEECSEEEETTEEE---------EEEECCHHHHHHHHHHHHHHHHHHHHTTCTTCCCCCSTTCCG
T ss_pred HHHHHEEECCCCCCCEEEECCCCCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 98532675676779869985631887887---------877886999999999999999999982855332114566654
Q ss_pred ------------CCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC--C-----------CCCCCCCCCCCCCCCCCCC
Q ss_conf ------------92699999999808999998799983443246789--9-----------9888873000023589987
Q 003571 564 ------------NEDALVEKVLKSLPRLRPTKIAEDGSIMEWAQDFK--D-----------PEVHHRHLSHLFGLFPGHT 618 (810)
Q Consensus 564 ------------~~~~~~~~w~~~~~~L~p~~i~~~G~l~ew~~~~~--~-----------~~~~hrh~s~L~~l~P~~~ 618 (810)
+ ++++++|+++++||+|++|+.+|+|+||.++++ + ++++|||+|||+++||+++
T Consensus 613 ~~~~~~~~~~~~d-~~~~~~w~~~~~kL~p~~i~~~G~l~EW~~d~~~~~~~~G~~i~~~~~~~~HRH~ShL~~lyPg~~ 691 (899)
T 2eab_A 613 DNWAKNDSGNFTD-ANANRSWSCAKSLLKPIEVGDSGQIKEWYFEGALGKKKDGSTISGYQADNQHRHMSHLLGLFPGDL 691 (899)
T ss_dssp GGGCBCTTSCBSC-TTSCCCHHHHHHHHCCCCBCTTSCBCSSTTBCSTTBBTTSCBCTTCCTTSCCSCCGGGTTTTTSSS
T ss_pred HCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 2123334444589-899999999985799764488744610154334332335665445688857763221576568341
Q ss_pred CCCCCCHHHHHHHHHHHHHHC------CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 798899779999999974408------99998079999999875299369999999986223976555578985456545
Q 003571 619 ITIEKNPDLCKAAEKTLQKRG------EEGPGWSITWKTALWARLHDQEHAYRMVKRLFNLVDPEHEKHFEGGLYSNLFA 692 (810)
Q Consensus 619 i~~~~~p~l~~aa~~tl~~rg------~~~sgws~~~~a~~~ARLgd~~~A~~~l~~~l~~~~~~~~~~~~~~~~~nl~~ 692 (810)
|+. .+|++++||+++|+.|+ ++++|||++|++++||||+|+++||++|+.++. ++++||||+
T Consensus 692 I~~-~~pel~~aa~~tL~~Rg~~g~~~~~~tGws~aw~~~~~ARL~dg~~A~~~l~~ll~-----------~~~~~Nl~~ 759 (899)
T 2eab_A 692 ITI-DNSEYMDAAKTSLRYRCFKGNVLQSNTGWAIGQRINSWARTGDGNTTYQLVELQLK-----------NAMYANLFD 759 (899)
T ss_dssp SCT-TCHHHHHHHHHHHHHHHEETTEECCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----------HSBCTTCCB
T ss_pred CCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH-----------CCCCCCCCC
T ss_conf 589-99899999999999727556788898855899999998876898999999999985-----------686765566
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCC-----------CEEEECCCCCCCCCCCCEEECEEEECCEEEEEEEECCCEEEEE
Q ss_conf 89996225400499999998720029-----------9289779999001267012025763117999998389079999
Q 003571 693 AHPPFQIDANFGFTAAVAEMLVQSTL-----------NDLYLLPALPWDKWSSGCVKGLKARGGETVSICWKDGDLHEVG 761 (810)
Q Consensus 693 ~h~pfqidgn~G~~agi~emLlqs~~-----------g~i~llPalP~~~W~~g~~~gL~arG~~~V~~~w~~g~l~~v~ 761 (810)
.|||||||||||+++||+||||||+. |.|+|||||| ++|++|+|+|||+||+|+||++|++|++++++
T Consensus 760 ~h~pfqiDgnfG~~agi~EMLlQS~~~~~~~~g~~~~g~I~LlPAlP-~~W~~Gsv~GLrarGgf~V~~~w~~G~l~~~~ 838 (899)
T 2eab_A 760 YHAPFQIDGNFGNTSGVDEMLLQSNSTFTDTAGKKYVNYTNILPALP-DAWAGGSVSGLVARGNFTVGTTWKNGKATEVR 838 (899)
T ss_dssp BSSSBCTHHHHHHHHHHHHHHEECCCEEECTTCCEEETCEEESTTCC-TTCCSEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred CCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC-CCCCCCEEEEEEECCCEEEEEEEECCEEEEEE
T ss_conf 78983066405579999999855666556666777688699868697-22346869889965717999999799789999
Q ss_pred EEECCCCCCCCEEEEEECCC------------------------EEEEEECCCCEEEEEEECC
Q ss_conf 99689997100024541177------------------------1899983698099991033
Q 003571 762 IYSNYSNNDHDSFKTLHYRG------------------------TSVKVNLSAGKIYTFNRQL 800 (810)
Q Consensus 762 i~s~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~G~~~~i~~~~ 800 (810)
|+|.+|+.|+ |+.++++ ..++|+|++|++|+|...+
T Consensus 839 i~s~~g~~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~y~i~~~~ 898 (899)
T 2eab_A 839 LTSNKGKQAA---VKITAGGAQNYEVKNGDTAVNAKVVTNADGASLLVFDTTAGTTYTITKKA 898 (899)
T ss_dssp EEESSCCCEE---EEETTTCGGGEEEEETTEECCCEEEECTTSCEEEEECCCTTEEEEEEEC-
T ss_pred EEECCCCEEE---EEECCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEEEECC
T ss_conf 9968998199---99689774205898258857985023456785599972588789997657
No 2
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=1.00 E-value=1 Score=1369.56 Aligned_cols=766 Identities=43% Similarity=0.794 Sum_probs=691.7
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 85068658876722224334895100002888824499214520128999999998136689999999739978999999
Q 003571 12 PLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATAAS 91 (810)
Q Consensus 12 ~~~l~~~~Pa~~w~ealpiGNG~lGamv~G~~~~e~i~lne~tlWsg~~~~~~~~~~~~~l~~~r~~~~~g~~~~a~~l~ 91 (810)
+++|||++||+.|+||||||||||||||||++..|+|||||+|||+|+|.++.||++++.|++||+++++|++.+|++++
T Consensus 2 ~~~lwy~~Pa~~w~eaLpiGNG~lGamv~G~~~~e~i~lne~tlW~g~p~~~~~~~~~~~l~~ir~~~~~g~~~~A~~l~ 81 (803)
T 2rdy_A 2 SLKIQFDFPASFWTEALPIGNGNLGAMVFGKVEKERIALNEDTLWSGYPKDWNNPKAKEVLPKVRELIAQEKYEEADQLS 81 (803)
T ss_dssp -CEEEESSCCSSGGGSEEEECSSEEEEECCCSSEEEEEEEETTCBSSCSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCEEECCCCCCHHHHCEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 96458288310232412206885159823887758999758751758998778800677899999999879968999999
Q ss_pred HHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEECCEEEEEEEEEECCCCEEEEEEEECCCCCE
Q ss_conf 84419999876545446998138988667688289975356389999987998999999873599789999990899844
Q 003571 92 VKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSL 171 (810)
Q Consensus 92 ~~~~g~~~~~y~~lG~l~i~~~~~~~~~~~~~Y~R~LDl~~g~~~~~~~~~g~~~~re~f~S~pd~vlv~~i~~~~~~~l 171 (810)
..+++...++|+|+|+|.|+|......++ +|+|+|||++|+++|+|+.+|+.|+|++|||+||+|||+||++++++++
T Consensus 82 ~~~~~~~~~~y~~lG~l~l~~~~~~~~~~--~y~r~LDl~~a~~~~~~~~~g~~~~re~f~s~~d~viv~~l~a~~~~~~ 159 (803)
T 2rdy_A 82 RDMMGPYTQSYLPFGDLNIFMDHGQVVAP--HYHRELDLSTGIVTVTYTIGGVQYTRELFVTYPDRAIVVRLTASKEGFL 159 (803)
T ss_dssp TTSCCCCCCCBCCCEEEEEEESSCSCCCS--CCEEEEETTTTEEEEEEEETTEEEEEEEEEETTTTEEEEEEEESSTTCE
T ss_pred HHHCCCCCCCCCCCEEEEEECCCCCCCCC--CEEEEEECCCEEEEEEEEECCEEEEEEEEEECCCCEEEEEEECCCCCCE
T ss_conf 87406788776644799996378877756--5269999020699999998999999999995689989999963898867
Q ss_pred EEEEEECCCCCCCEEEECCCEEEEEEECCCCCCCCCC--------CCCCCCCCEEEEEEEEEEEECCCEEEEEECCCEEE
Q ss_conf 9999835778887022069869999844998899998--------88999994079999999990896039983199089
Q 003571 172 SFNVSLDSLLDNHSYVNGNNQIIMEGRCPGKRIPPKA--------NANDDPKGIQFSAILEIKISDDRGTISALEDKKLK 243 (810)
Q Consensus 172 ~~~~~l~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~--------~~~~~~~g~~f~~~~~v~~~g~~G~~~~~~~~~l~ 243 (810)
+|+++|.++......+ ++++++++|+.+....+.+. ...+..++++|++.++|...| |++++ .+++|.
T Consensus 160 ~~~~~l~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~v~~~g--g~~~~-~~~~l~ 235 (803)
T 2rdy_A 160 SFRAKLDSLLRHVSSV-GAEHYTISGTAPEHVSPSYYDEENPVRYGHPDMSQGMTFHGRLAAVNEG--GSLKV-DADGLH 235 (803)
T ss_dssp EEEEEEECSSCCEEEC---CCEEEEEECCSEECCTTCCCSSCEECCCTTTCCSCEEEEEEEEEEES--SEEEE-ETTEEE
T ss_pred EEEEEECCCCCCCEEE-CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECC--CEEEE-CCCEEE
T ss_conf 8999960687774541-4997999998288776553333344433455777872799999999579--57994-188799
Q ss_pred EECCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf 96793899999964068899999999999949999999998560999999999999999734232299658998764566
Q 003571 244 VEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDT 323 (810)
Q Consensus 244 v~~a~~v~i~~~~~T~~~~~~~~~~~~~~d~~~~~~~~l~~a~~~~y~~l~~~H~~~w~~lw~r~~i~l~~~~~~~~~~~ 323 (810)
|+++++|+|++++.|+|+. .++..++..+|.+.+.+.|.++..++|++|+++|+++|++||+|++|+|++++.
T Consensus 236 v~~a~~~~l~~~~~T~~~~-~~~~~~~~~d~~~~a~~~l~~a~~~~y~~L~~~H~~~w~~~w~r~~i~l~g~~~------ 308 (803)
T 2rdy_A 236 VMGATCATLYFSASTSFDP-STGASCLERDPSLRTIETIKAICKRGYKEIVNRHLEDYTKLFNRVSLHLGESIA------ 308 (803)
T ss_dssp EEEESEEEEEEEEEESEET-TTTEECTTCCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTCEEECCCCCS------
T ss_pred EECCCEEEEEEEEEECCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCC------
T ss_conf 9789699999997616777-555445678989999999998663699999999999999863840899679864------
Q ss_pred CCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76666689983888750148999589999999998987623899998999730258999999899863223332311222
Q 003571 324 CSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQS 403 (810)
Q Consensus 324 ~~~~~~~~~pt~~rl~~~~~~~d~~L~~~~f~~grYlLisssR~g~~P~~LqGlWn~~~~~~W~g~yh~niN~qm~ywp~ 403 (810)
...+|||+|+++++.+ |++|++++|||+||||+|+||++++|+||||+||+++.++|+|+||+|||+||||||+
T Consensus 309 -----~~~~~td~rl~~~~~~-d~~l~~l~~~~~rYlL~sssr~g~~P~~LqGlw~~~~~~~W~g~y~~n~N~em~ywP~ 382 (803)
T 2rdy_A 309 -----PADMSTDQRIKEYGSR-DLGLVELLFQYGRYLMIASSRPGTQPANLQGIWNEETRAPWSSNYTLNINAEMNYWPA 382 (803)
T ss_dssp -----CTTCCHHHHHHHHGGG-SHHHHHHHHHHHHHHHHHHCCTTSCCCBTTBTCCCCTTCGGGGCEETTTHHHHHTTTT
T ss_pred -----CCCCCHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHH
T ss_conf -----4558758999873248-9899999999999998744799998988765379987899786505302656557665
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC----CCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3799346459999999996798999999762997569830178677778899----985222373678999999999986
Q 003571 404 LPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADR----GKVVWALWPMGGAWLCTHLWEHYN 479 (810)
Q Consensus 404 ~~~nl~e~~~~l~~~~~~~l~~~r~~A~~~yG~~G~~~~~~td~wg~~~p~~----~~~~~~~~~~~~awla~~lw~yY~ 479 (810)
+.+|+|||++|||+||+++++.||++||++||++||++||++|+|+.++|.+ +.+.|++||++++|+|+|+|+||+
T Consensus 383 ~~~n~pE~~~~ll~y~~~~l~~ar~~A~~~~G~~Ga~~p~~td~w~~~~p~g~~G~~~~~~~~w~~~~awla~~lw~yy~ 462 (803)
T 2rdy_A 383 ETCNLAELHKPLIHFIERLAANGKKTAEINYGARGWVAHHNADLWGQTAPVGDFGHGDPVWAFWPMGGVWLTQHLWEHYT 462 (803)
T ss_dssp TTTTCGGGGHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCSEECTTCCCSCCSGGGTSCHHHHCCCCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 64486999999999999989999999999709980798602465446677545678885502063539999999999998
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 43989999752089999999999885203899919988998888876789998532225918999999999999999999
Q 003571 480 YTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAE 559 (810)
Q Consensus 480 ~T~D~~fL~~~~yP~l~~~A~F~~~~l~~~~~G~~~~~ps~sPE~~~~~~~g~~~~~~~n~t~d~~~ir~ll~~~~~a~~ 559 (810)
||+|++||++++||+|+++|+||+++++++++|+|++.|++|||+.+..+ |.....++|++|||+|++++|+.++++++
T Consensus 463 ~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~~sPE~~~~~~-g~~~~~~~n~tytn~~~~~~l~~a~~a~~ 541 (803)
T 2rdy_A 463 FGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPSTSPEQRFRIG-EKGYAVSSATTMDLSLIAECFDNCIQAAK 541 (803)
T ss_dssp HHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSBCBTTBCEEET-TEEECCBSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHCHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 53989999862339999999999996277899819988877634304678-86431104809999999999999999999
Q ss_pred HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 93879269999999980899999879998344324678999888873000023589987798899779999999974408
Q 003571 560 VLEKNEDALVEKVLKSLPRLRPTKIAEDGSIMEWAQDFKDPEVHHRHLSHLFGLFPGHTITIEKNPDLCKAAEKTLQKRG 639 (810)
Q Consensus 560 ~Lg~~~~~~~~~w~~~~~~L~p~~i~~~G~l~ew~~~~~~~~~~hrh~s~L~~l~P~~~i~~~~~p~l~~aa~~tl~~rg 639 (810)
+||++ ++++++|++++++|+|++++++|+|+||..++.+.++.|||+|||+++||+.+|++.++|+++++++++|+.|+
T Consensus 542 ~Lg~~-~~~~~~w~~~~~~L~p~~i~~~G~l~ew~~d~~~~~~~hrh~s~L~~l~P~~~i~~~~~p~l~~a~~~tle~r~ 620 (803)
T 2rdy_A 542 RLSID-EDFVKALSDAKQRLLPLQIGKRGQLQEWSNDFEDEDVHHRHVSHLVGIYPGRLITEQSAPNLFEAAKTSLEIRG 620 (803)
T ss_dssp HTTCC-HHHHHHHHHHHHTBCCCCBCTTSCBCSSSSCCEESCTTCSCCGGGTTTTTCCSSCTTTCHHHHHHHHHHHHHHC
T ss_pred HHCCC-HHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHC
T ss_conf 97869-89999999998459997538888144424555667867774235554386513587789899999999999737
Q ss_pred CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 99998079999999875299369999999986223976555578985456545899962254004999999987200299
Q 003571 640 EEGPGWSITWKTALWARLHDQEHAYRMVKRLFNLVDPEHEKHFEGGLYSNLFAAHPPFQIDANFGFTAAVAEMLVQSTLN 719 (810)
Q Consensus 640 ~~~sgws~~~~a~~~ARLgd~~~A~~~l~~~l~~~~~~~~~~~~~~~~~nl~~~h~pfqidgn~G~~agi~emLlqs~~g 719 (810)
++++|||++|++++|||||++++||++|+.+++.++..+.....+|+++|||+.|||||||||||+++||+||||||++|
T Consensus 621 ~~~sgwS~~~~a~~aArLg~~~~A~~~l~~~l~~~~~~~~~~~~gg~~~nL~~~h~pfqidgn~G~~agi~emLlqs~~g 700 (803)
T 2rdy_A 621 DEGTGWSLGWKISLWARFKDGNRCERLLSNMLTLIKEDESMQHRGGVYANLFGAHPPFQIDGNFSATAGIAEMLLQSHQG 700 (803)
T ss_dssp SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHSCBCCTTCCCTTCCEECTTSCEESSSBCTHHHHHHHHHHHHHHEECSSS
T ss_pred CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99996689999999998499889999999997641234432347873475313489823140467999999999841498
Q ss_pred EEEECCCCCCCCCCCCEEECEEEECCEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEECC------C--------E--E
Q ss_conf 2897799990012670120257631179999983890799999968999710002454117------7--------1--8
Q 003571 720 DLYLLPALPWDKWSSGCVKGLKARGGETVSICWKDGDLHEVGIYSNYSNNDHDSFKTLHYR------G--------T--S 783 (810)
Q Consensus 720 ~i~llPalP~~~W~~g~~~gL~arG~~~V~~~w~~g~l~~v~i~s~~~~~~~~~~~~~~~~------~--------~--~ 783 (810)
.|+|+|+|| ++|++|+|+||++||+|+|+++|++|++++++|+|.+++.|+ |+++.. + . .
T Consensus 701 ~i~l~PaLP-~~W~~g~f~gl~~rG~~~v~~~w~~g~~~~~~i~s~~g~~~~---v~~~~~~~~~~~g~~~~~~~~~~g~ 776 (803)
T 2rdy_A 701 YLEFLPALP-DSWKDGYVKGLRGRGGYEVDLAWTNGALVKVEIVSTKTQTCE---VLTRISMRITESGEEVEGDVLDSGR 776 (803)
T ss_dssp SEEESTTCC-TTCCSEEEEEEEETTTEEEEEEEETTEEEEEEEEESSCEEEE---EECSSCCEEEETTEEECEEECGGGE
T ss_pred EEEECCCCC-CCCCCCEEEEEEECCCEEEEEEEECCEEEEEEEEECCCCEEE---EEECCEEEEECCCCEEEEECCCCEE
T ss_conf 486899897-557668698999768389999998998999999978998599---9989977783389378864167505
Q ss_pred EEEECCCCEEEEEEECCCC
Q ss_conf 9998369809999103332
Q 003571 784 VKVNLSAGKIYTFNRQLKC 802 (810)
Q Consensus 784 ~~~~~~~G~~~~i~~~~~~ 802 (810)
++|+|++|++|+|......
T Consensus 777 ~~~~t~~G~~y~~~~~~~~ 795 (803)
T 2rdy_A 777 MSFQVEKGKRYVLNRTTDG 795 (803)
T ss_dssp EEEEECTTCEEEEEC----
T ss_pred EEEEECCCCEEEEEECCCC
T ss_conf 9998338988999568997
No 3
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=1.00 E-value=1 Score=669.38 Aligned_cols=548 Identities=14% Similarity=0.093 Sum_probs=431.3
Q ss_pred CCCCCCCCEEEEEECCCCEEEEEEEEC----CEEEEEEEEEECCCC---EEEEEEEE-CC-CCCEEEEEEECCCCCCCE-
Q ss_conf 886676882899753563899999879----989999998735997---89999990-89-984499998357788870-
Q 003571 116 HLKYAEETYRRELDLNTATARVKYSVG----NVEFTREHFSSNPDQ---VIVTKISG-SE-SGSLSFNVSLDSLLDNHS- 185 (810)
Q Consensus 116 ~~~~~~~~Y~R~LDl~~g~~~~~~~~~----g~~~~re~f~S~pd~---vlv~~i~~-~~-~~~l~~~~~l~~~~~~~~- 185 (810)
...++ +|+|+|||.+|+++++|+.. +++++++.|||+++. +++++|++ +. ++.|++...+++...+..
T Consensus 103 ~~~i~--~y~r~LDl~~G~l~r~~~~~~~~~~v~i~~~rfvS~~~~~l~~i~~~it~~~~~~~~i~v~~~ld~~~~n~~~ 180 (754)
T 1h54_A 103 KDKIS--DFTLDLDMHQGVLNRSFVVERGAVRVALNFQRFLSVAQPELSVQKVTVKNLSDAEVDVTLKPSIDADVMNEEA 180 (754)
T ss_dssp TSEEE--EEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEECSSSTTEEEEEEEEEECSSSCEEEEECCEEECCCCCTTC
T ss_pred CCCEE--EEEEEEECCCEEEEEEEEEEECCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCC
T ss_conf 78420--3899998465899999999908928999999998588775799999999877896479999853465326776
Q ss_pred ----------EE-ECCCEEEEEEECCCCCCCCCCCCCCCCCCEEE---EEEEEE--EEECCCEEEEEECCC------EEE
Q ss_conf ----------22-06986999984499889999888999994079---999999--990896039983199------089
Q 003571 186 ----------YV-NGNNQIIMEGRCPGKRIPPKANANDDPKGIQF---SAILEI--KISDDRGTISALEDK------KLK 243 (810)
Q Consensus 186 ----------~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~f---~~~~~v--~~~g~~G~~~~~~~~------~l~ 243 (810)
.. .+.+.+.+.+++.. .++.+ ++.+++ ...+..+.+....+. ++.
T Consensus 181 ~~d~~~~~~~~~~~~~~~~~l~~~t~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (754)
T 1h54_A 181 NYDERFWDVLATDQQADRGSIVAKTTP-------------NPFGTPRFTSGMEMRLVTDLKNVAITQPNEKEVTTAYTGK 247 (754)
T ss_dssp CCC-CCEEEEEEEECSSEEEEEEEECC-------------CSSCCCCCEEEEEEEEEESSEEECCCCCBTTEEECEEEEE
T ss_pred CCCCCEEEEEECCCCCCEEEEEEEECC-------------CCEEEEEEEEEEEEECCCCCCCCEEEECCCCEEEEEEEEE
T ss_conf 778734567412567865999999878-------------7769876578998511135654126632687478999999
Q ss_pred EECCCEEEE--EEEEEECCCCCCCCCCCCCCCHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 967938999--9996406889999999999994999999999-8560999999999999999734232299658998764
Q 003571 244 VEGSDWAVL--LLVASSSFDGPFINPSDSKKDPTSESMSALQ-SIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIV 320 (810)
Q Consensus 244 v~~a~~v~i--~~~~~T~~~~~~~~~~~~~~d~~~~~~~~l~-~a~~~~y~~l~~~H~~~w~~lw~r~~i~l~~~~~~~~ 320 (810)
++++++++| ++++.|+++. . ..++.+.+.+.+. .+..++|++|+++|+++|++||+|++|+|++++
T Consensus 248 ~~~g~~~~l~K~v~~~ts~~~--~-----~~~~~~~a~~~l~~~a~~~~~~~l~~~h~~~w~~~w~~~~i~i~gd~---- 316 (754)
T 1h54_A 248 LAPQASAELEKRVIVVTSRDY--D-----TQESLTAAMHQLSDKVAQSSYEDLLNAHTAIWAQRWEKSDVVIKGDD---- 316 (754)
T ss_dssp ECTTCEEEEEEEEEEEETTSC--S-----SHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTCEEEESCH----
T ss_pred ECCCCEEEEEEEEEEEECCCC--C-----CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCH----
T ss_conf 859959999999999988877--7-----61289999999877665189999999999999987604858967998----
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC-CCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 56676666689983888750148999589999999998987623-8999---9899973025899999989986322333
Q 003571 321 TDTCSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLISS-SRPG---TQVANLQGIWNEDLSPTWDSAPHVNINL 396 (810)
Q Consensus 321 ~~~~~~~~~~~~pt~~rl~~~~~~~d~~L~~~~f~~grYlLiss-sR~g---~~P~~LqGlWn~~~~~~W~g~yh~niN~ 396 (810)
.+||+ ++|++|+|.++ +|++ ++|+ +|+|++ .|.|+ .+||+
T Consensus 317 -------------~~q~~---------------~r~~~y~Ll~s~s~~~~~~~i~a--~GL~g~----~Y~G~--~fWdt 360 (754)
T 1h54_A 317 -------------ESQQG---------------IRFNLFQLFSTYYGEDARLNIGP--KGFTGE----KYGGA--TYWDT 360 (754)
T ss_dssp -------------HHHHH---------------HHHHHHHHHHHCCSSCTTCCCCT--TTTSCC----TTCSS--BCTHH
T ss_pred -------------HHHHH---------------HHHHHHHHHHCCCCCCCCCCCCC--CCCCCC----CCCCC--CEECH
T ss_conf -------------99999---------------99999999864688777889799--987899----88874--04364
Q ss_pred CCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC------CHHH
Q ss_conf 231122237-993464599999999967989999997629975698301786777788999852223736------7899
Q 003571 397 EMNYWQSLP-CNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPM------GGAW 469 (810)
Q Consensus 397 qm~ywp~~~-~nl~e~~~~l~~~~~~~l~~~r~~A~~~yG~~G~~~~~~td~wg~~~p~~~~~~~~~~~~------~~aw 469 (810)
||+|||++. +|+||++++|++||+++++.||++|++ +|++||+|||.+. -|. ..+..|+. .+||
T Consensus 361 E~~~~P~~~~~~~pe~a~~ll~yr~~~l~~Ar~~A~~-~G~~Ga~~pW~s~-~G~-------e~~~~w~~~~~q~Hi~a~ 431 (754)
T 1h54_A 361 EAFAFPVYLGITDPKVTRNLLMYRYKQLDGAYINAQE-QGLKGALFPMVTF-DGI-------ECHNEWEITFEEIHRNGD 431 (754)
T ss_dssp HHTHHHHHHHHSCHHHHHHHHHHHHTTHHHHHHHHHT-TTCCSCCCCSSBS-SSS-------BCCCCHHHHTTCTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCEEEEECC-CCC-------CCCCCCCCCCCEECCHHH
T ss_conf 7788777775479999999999999989999999997-4987663035776-888-------579887651232022599
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCEEEECCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99999999864398999975208999999999988520389-991998899888-8876789998532225918999999
Q 003571 470 LCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGH-DGYLETNPSTSP-EHEFIAPDGKLACVSYSSTMDMAII 547 (810)
Q Consensus 470 la~~lw~yY~~T~D~~fL~~~~yP~l~~~A~F~~~~l~~~~-~G~~~~~ps~sP-E~~~~~~~g~~~~~~~n~t~d~~~i 547 (810)
||+++|+||++|+|++||++++||+|+++|+||++++++++ +|+|+|.++++| |+. ..++||+|||+|+
T Consensus 432 ia~a~~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdEy~---------e~v~nn~ytn~~a 502 (754)
T 1h54_A 432 IAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYE---------NNVDNNWDTNMLA 502 (754)
T ss_dssp HHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSSTTS---------CSBSCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCC---------CCCCCCHHHHHHH
T ss_conf 9999999988409899987179099999999999860992799979986430754466---------7788849999999
Q ss_pred HHHHHHHHHHH--------HHHCCCCHHHHHHHHHHCCCCCCCCCCC---------CCCEEEECCCCCCCCCCCCCC---
Q ss_conf 99999999999--------9938792699999999808999998799---------983443246789998888730---
Q 003571 548 REVFSAIISAA--------EVLEKNEDALVEKVLKSLPRLRPTKIAE---------DGSIMEWAQDFKDPEVHHRHL--- 607 (810)
Q Consensus 548 r~ll~~~~~a~--------~~Lg~~~~~~~~~w~~~~~~L~p~~i~~---------~G~l~ew~~~~~~~~~~hrh~--- 607 (810)
+++|+.+++++ +.||++ ++++++|++++++|+++.+++ +++++||. +.+.++.|||+
T Consensus 503 ~~~l~~a~~~~~~l~~~~~~~lg~~-~~~~~~w~~i~~~l~~p~~~~~gv~~q~dg~~~l~ewd--~~~~~~~~~~l~~~ 579 (754)
T 1h54_A 503 QWTLKYTLEILGKVDQDTAKQLDVS-DEEKTKWQDIVDRMYLPYDKDLNIFVQHDGFLDKDIEP--VSSIPADQRPINQN 579 (754)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHCCC-HHHHHHHHHHHHTBCCCEETTTTEECSSTTGGGSCCCC--GGGSCGGGCSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCC--HHHCCCCCCCHHCC
T ss_conf 9999999999998789999985999-79999999999689987147889356326666320275--00046557870003
Q ss_pred ---------------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf ---------------00023589987798899779999999974408999980799999998752993699999999862
Q 003571 608 ---------------SHLFGLFPGHTITIEKNPDLCKAAEKTLQKRGEEGPGWSITWKTALWARLHDQEHAYRMVKRLFN 672 (810)
Q Consensus 608 ---------------s~L~~l~P~~~i~~~~~p~l~~aa~~tl~~rg~~~sgws~~~~a~~~ARLgd~~~A~~~l~~~l~ 672 (810)
++|+++||+..+ .+|+.+++....++.|+.|+++||.++.+++|||||++++|+++|.+.+.
T Consensus 580 ~~~~~~~r~~~iKQAdvll~~yp~~~~---~~~e~~~~~l~~Ye~rt~~~ssls~~~~ai~aArlg~~~~A~~~~~~~~~ 656 (754)
T 1h54_A 580 WSWDKILRSPYIKQGDVLQGIWDFIDD---YTPEQKKANFDFYEPLTVHESSLSPAIHSVLAADLHYEDKAVELYSRTAR 656 (754)
T ss_dssp SCHHHHHHSSCBSSCSHHHHHHHTTTS---SCHHHHHHHHHHHGGGBCCCSTTHHHHHHHHHHHTTCHHHHHHHHTTTTT
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCCC---CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 662212355312511177752438878---99999998899974635899970799999999985998899999998768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCC------CCEEEECCCCCCCCCCCCEEECEEEECC
Q ss_conf 2397655557898545654589996225400-49999999872002------9928977999900126701202576311
Q 003571 673 LVDPEHEKHFEGGLYSNLFAAHPPFQIDANF-GFTAAVAEMLVQST------LNDLYLLPALPWDKWSSGCVKGLKARGG 745 (810)
Q Consensus 673 ~~~~~~~~~~~~~~~~nl~~~h~pfqidgn~-G~~agi~emLlqs~------~g~i~llPalP~~~W~~g~~~gL~arG~ 745 (810)
.++.+.|++++ ||+| |+++|+++|++|++ +|.|+|.|+|| ++|++++|+ +++||+
T Consensus 657 ---------------~dl~d~~~~~~-~G~~~~~~gG~~~~~v~g~~Glr~~~~~L~l~P~LP-~~W~~~~~~-l~~rG~ 718 (754)
T 1h54_A 657 ---------------LDLDNYNNDTT-DGLHITSMTGAWIAVVQGFAGMRVRDGQLHYAPFLP-KTWTSYTFR-QVFRDR 718 (754)
T ss_dssp ---------------TTTTTTTSCGG-GCCCGGGGGHHHHHHHTTTSCCEEETTEEEECCCCC-TTCSEEEEE-EEETTE
T ss_pred ---------------HHHCCCCCCCC-CCCCCCHHHHHHHHHHHHHHCEECCCCEEEECCCCC-CCCCEEEEE-EEECCE
T ss_conf ---------------65311588777-875402055899999988506662399798888898-777646999-999996
Q ss_pred EEEEEEEECCCEEEEEEEECCCCCCC
Q ss_conf 79999983890799999968999710
Q 003571 746 ETVSICWKDGDLHEVGIYSNYSNNDH 771 (810)
Q Consensus 746 ~~V~~~w~~g~l~~v~i~s~~~~~~~ 771 (810)
.+++.|+++++ +|++..|..|+
T Consensus 719 -~~~i~v~~~~~---~i~~~~g~~~~ 740 (754)
T 1h54_A 719 -LIEVSVHADGP---HFKLLSGEPLT 740 (754)
T ss_dssp -EEEEEEETTEE---EEEEEESSCEE
T ss_pred -EEEEEEECCEE---EEEECCCCCEE
T ss_conf -99999989989---99984799789
No 4
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=1.00 E-value=1 Score=178.44 Aligned_cols=373 Identities=10% Similarity=0.044 Sum_probs=229.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 95899999999989876238999989997302589999998998632233323112223799346459999999996798
Q 003571 346 DPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSIN 425 (810)
Q Consensus 346 d~~L~~~~f~~grYlLisssR~g~~P~~LqGlWn~~~~~~W~g~yh~niN~qm~ywp~~~~nl~e~~~~l~~~~~~~l~~ 425 (810)
|+.|.++ ++.+.+-+.++... .|. .|.. .....|.||.++.. .-.++..+.+++++..++.+...
T Consensus 543 d~~lN~l-~~~a~~tl~~n~~~--~~t--D~p~--REr~~W~gD~~~~a-----~~~l~~~g~~~lar~~L~~l~~~--- 607 (956)
T 2okx_A 543 DALLNAT-WEISRHTTRLCMED--TFV--DCPS--YEQVFWVGDSRNEA-----LVNYYVFGETEIVERCLNLVPGS--- 607 (956)
T ss_dssp CHHHHHH-HHHHHHHHHHTBSS--SBC--SCTT--TTCCCBHHHHHHHH-----HHHHHHTCCCHHHHHHHHHGGGG---
T ss_pred CHHHHHH-HHHHHHHHHHHCCC--CCC--CCCC--CCCCCCHHHHHHHH-----HHHHHHCCCHHHHHHHHHHHHHH---
T ss_conf 3999999-99999999975556--766--7874--25776678899999-----99998738889999999999964---
Q ss_pred HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999976299756983017867777889998522237367899999999998643989999752089999999999885
Q 003571 426 GSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDW 505 (810)
Q Consensus 426 ~r~~A~~~yG~~G~~~~~~td~wg~~~p~~~~~~~~~~~~~~awla~~lw~yY~~T~D~~fL~~~~yP~l~~~A~F~~~~ 505 (810)
...+|..-+..-+.|. ... +.-..|++.++|+||++|+|.+||+ +.||.|+..++|+.++
T Consensus 608 --------Q~~dG~ip~~~p~~~~-----~~~------~~~~~~~i~~~~~yy~~tGD~~~L~-e~yp~lk~~l~~~~~~ 667 (956)
T 2okx_A 608 --------ADETPLYLDQVPSAWS-----SVI------PNWTFFWILACREYAAHTGNEAFAA-RIWPAVKHTLTHYLEH 667 (956)
T ss_dssp --------TTTCTTCCSBSSCSSC-----CCC------HHHHHHHHHHHHHHHHHHTCHHHHH-HHHHHHHHHHHHHHTT
T ss_pred --------CCCCCCCCCCCCCCCC-----CCC------CCHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHC
T ss_conf --------3358976764566666-----778------5738899999999999869999999-9999999999999962
Q ss_pred HCCCCCCEEEECCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC----
Q ss_conf 20389991998899888887678-9998532225918999999999999999999938792699999999808999----
Q 003571 506 LIEGHDGYLETNPSTSPEHEFIA-PDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR---- 580 (810)
Q Consensus 506 l~~~~~G~~~~~ps~sPE~~~~~-~~g~~~~~~~n~t~d~~~ir~ll~~~~~a~~~Lg~~~~~~~~~w~~~~~~L~---- 580 (810)
. +++|.+.. |++.+.. .+... ...-.+++.++++...|+.++++++.||.+ + ..++|++.+++|.
T Consensus 668 ~--d~~GLl~~-----~~~~~~DW~d~~~-~~~G~~~~~~a~~~~al~~~a~lA~~LG~~-~-~a~~y~~~A~~lk~ai~ 737 (956)
T 2okx_A 668 I--DDSGLLNM-----AGWNLLDWAPIDQ-PNEGIVTHQNLFLVKALRDSRALAAAAGAT-E-EADAFAARADLLAETIN 737 (956)
T ss_dssp B--CTTSSBCC-----SSCCCCCSSSCCC-CSSSEEHHHHHHHHHHHHHHHHHHHHTTCG-G-GGHHHHHHHHHHHHHHH
T ss_pred C--CCCCCEEE-----CCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCH-H-HHHHHHHHHHHHHHHHH
T ss_conf 7--99998884-----8987467667778-999868999999999999999999981996-8-99999999999999999
Q ss_pred CCCCCC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--HCCC--CCCCHHHHHHHHHH
Q ss_conf 998799-983443246789998888730000235899877988997799999999744--0899--99807999999987
Q 003571 581 PTKIAE-DGSIMEWAQDFKDPEVHHRHLSHLFGLFPGHTITIEKNPDLCKAAEKTLQK--RGEE--GPGWSITWKTALWA 655 (810)
Q Consensus 581 p~~i~~-~G~l~ew~~~~~~~~~~hrh~s~L~~l~P~~~i~~~~~p~l~~aa~~tl~~--rg~~--~sgws~~~~a~~~A 655 (810)
..-.+. .|.......+.......|++.+++++++-+ .+ .++..+++++.++. ++.+ ++.|+..|.+...+
T Consensus 738 ~~~wd~~~g~y~d~~~~~g~~~~~~~~~s~~lall~G-l~----p~~~~~av~~Ll~~~~~gy~~~Gt~w~~~~li~aLa 812 (956)
T 2okx_A 738 AVLWDEEKRAYIDCIHADGRRSDVYSMQTQVVAYLCG-VA----QGEREAVIEGYLSSPPPAFVQIGSPFMSFFYYEALE 812 (956)
T ss_dssp HHSEETTTTEECSEECTTSCBCCCCBHHHHHHHHHTT-CS----CHHHHHHHHHHHHSCCTTSBCCCSHHHHHHHHHHHH
T ss_pred HHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHC-CC----CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9713877898774156888706545639999999808-99----999999999973279853234877527999999999
Q ss_pred HCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHCCCC---------
Q ss_conf 529936999999998622397655557898545654589996-------2254004999999987200299---------
Q 003571 656 RLHDQEHAYRMVKRLFNLVDPEHEKHFEGGLYSNLFAAHPPF-------QIDANFGFTAAVAEMLVQSTLN--------- 719 (810)
Q Consensus 656 RLgd~~~A~~~l~~~l~~~~~~~~~~~~~~~~~nl~~~h~pf-------qidgn~G~~agi~emLlqs~~g--------- 719 (810)
|+|+.++|+++++..+.... ..+.++++..|+.++|+ +++.|++.++|+.+||+|+..|
T Consensus 813 r~G~~d~A~~ll~~~~~~~~-----~~g~tt~~E~~d~~~~~~~~~~~~~~s~nh~Wsag~~~~L~q~l~GI~p~~pG~~ 887 (956)
T 2okx_A 813 KAGRQTLMLDDIRRNYGQML-----RYDATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAPGYFLGSSILGVKRGADGWR 887 (956)
T ss_dssp HTTCHHHHHHHHHHHHHHHH-----HTTCSSCCSSCSSCCTTSSSTTSSCSCSCCGGGCTHHHHHHHTTSCEEECSGGGS
T ss_pred HCCCHHHHHHHHHHHHHHHH-----HCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 87998999999999999998-----6698754203468788866678756655767789999999998548001588878
Q ss_pred EEEECCCCCCCCCCCCEEECEEEECCEEEEEEEE--CCCEEEEEEEECCCCCCCCEEEEEEC
Q ss_conf 2897799990012670120257631179999983--89079999996899971000245411
Q 003571 720 DLYLLPALPWDKWSSGCVKGLKARGGETVSICWK--DGDLHEVGIYSNYSNNDHDSFKTLHY 779 (810)
Q Consensus 720 ~i~llPalP~~~W~~g~~~gL~arG~~~V~~~w~--~g~l~~v~i~s~~~~~~~~~~~~~~~ 779 (810)
.|+|.|+|| .|+.+++++++.+| .+|+++|+ .+....++|++..+.+++ |++|.
T Consensus 888 ~i~i~P~lp--~~~~~~~~~~~~~G-~~i~v~w~~~~~~~~~~~v~vP~g~~a~---v~lp~ 943 (956)
T 2okx_A 888 TVDIAPQPC--DLTWAEGVVPLPQG-GHIAVSWEFVSAGKLKLRIEAPEDIEVN---VTLPE 943 (956)
T ss_dssp EEEECCCCT--TCSEEEEEEECTTS-SEEEEEEEEEETTEEEEEEEEETTSEEE---ECCCT
T ss_pred EEEEEECCC--CCCEEEEEEECCCC-CEEEEEEEECCCCEEEEEEECCCCCEEE---EECCC
T ss_conf 799995799--98769999874799-7899999983398599999838998799---98768
No 5
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=1.00 E-value=1 Score=88.90 Aligned_cols=305 Identities=13% Similarity=0.180 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC-C-CCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 89999999999864398999975208999999999988520389991998899-8-888876789998532225918999
Q 003571 467 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPS-T-SPEHEFIAPDGKLACVSYSSTMDM 544 (810)
Q Consensus 467 ~awla~~lw~yY~~T~D~~fL~~~~yP~l~~~A~F~~~~l~~~~~G~~~~~ps-~-sPE~~~~~~~g~~~~~~~n~t~d~ 544 (810)
..|....+|+||++|||.+||+ +.||.|+...+|+..+. +++|.+..... . .+.. . ++. ....-..++.+
T Consensus 386 ~l~wi~~~~~yy~~tGD~~~L~-e~~p~l~~~ld~~~~~~--d~~GL~~~~~G~W~~~dW--~--d~~-~~~~G~~~~~~ 457 (739)
T 3cih_A 386 TFYWFLSVYDYYMYSGDRHFVN-QLYPRMQTMMDYVLGRT--NKNGMVEGMSGDWVFVDW--A--DGY-LDKKGELSFEQ 457 (739)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHTTB--CTTSCBCCCTTCBCCSCC--C--TTC-CCCSSEEHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCC--C--CCC-CCCCCCCHHHH
T ss_conf 4999999999999869999999-99999999999999745--889993468888636778--6--655-68887165788
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC-CC----CCCCCCEEEECCCCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 9999999999999999387926999999998089999-98----799983443246789998--8887300002358998
Q 003571 545 AIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRP-TK----IAEDGSIMEWAQDFKDPE--VHHRHLSHLFGLFPGH 617 (810)
Q Consensus 545 ~~ir~ll~~~~~a~~~Lg~~~~~~~~~w~~~~~~L~p-~~----i~~~G~l~ew~~~~~~~~--~~hrh~s~L~~l~P~~ 617 (810)
++....++.+.++++.||.+ +..++|++.+++|.. +. -+..|.... ++.... ..+-..+.+++++ .+
T Consensus 458 a~~y~al~~~a~lA~~lG~~--~~A~~y~~~A~~lk~a~~~~~wd~~~G~y~~---~~~~G~~~d~~~~~s~~laL~-~G 531 (739)
T 3cih_A 458 VLFCRSLETMALCADLVGDK--DGQQKYEKLASALKAKLEPTFWNNQKQAFVH---NCVDGRQSDAVTRYANMFSVF-FD 531 (739)
T ss_dssp HHHHHHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHEETTTTEECS---EEETTEECSCCCHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE---ECCCCCCCCCCCHHHHHHHHH-HC
T ss_conf 99999999999999983995--7899999999999999998551833692675---057787575554177699999-78
Q ss_pred CCCCCCCHHHHHHHHHHHHHH-CC--CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 779889977999999997440-89--999807999999987529936999999998622-39765555789854565458
Q 003571 618 TITIEKNPDLCKAAEKTLQKR-GE--EGPGWSITWKTALWARLHDQEHAYRMVKRLFNL-VDPEHEKHFEGGLYSNLFAA 693 (810)
Q Consensus 618 ~i~~~~~p~l~~aa~~tl~~r-g~--~~sgws~~~~a~~~ARLgd~~~A~~~l~~~l~~-~~~~~~~~~~~~~~~nl~~~ 693 (810)
. .+++..+++.+.+..+ +. ..+.|-..|.+...++.|..+.|++++...... ++.. ..+..-.|+.
T Consensus 532 l----~~~e~~~~v~~~L~~~~~~~~~~tp~~~~~~~~aL~~~G~~d~A~~ll~~~w~~~v~~G------attl~E~~~~ 601 (739)
T 3cih_A 532 Y----LNADKQQAIKQSVLLNDEILKITTPYMRFYELEALCALGEQETVMKEMKAYWGGMLKAG------ATSFWEKYNP 601 (739)
T ss_dssp C----SCHHHHHHHHHHTTTCTTSCCCCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTT------CSSCCSCCCT
T ss_pred C----CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC------CCEEEEECCC
T ss_conf 9----99899999999975275655666451899999999986998899999999999987379------9656881366
Q ss_pred ------C-----CCCCCCCCCHHHHHHHHHHHHCCC---------CEEEECCCCCCCCCCCCEEECEEEECCEEEEEEEE
Q ss_conf ------9-----996225400499999998720029---------92897799990012670120257631179999983
Q 003571 694 ------H-----PPFQIDANFGFTAAVAEMLVQSTL---------NDLYLLPALPWDKWSSGCVKGLKARGGETVSICWK 753 (810)
Q Consensus 694 ------h-----~pfqidgn~G~~agi~emLlqs~~---------g~i~llPalP~~~W~~g~~~gL~arG~~~V~~~w~ 753 (810)
| .|+...-|++..++....|.|.-- ..|.|.|.+| . |+..+.+ +....| .|+++|+
T Consensus 602 ~~~~~~~~~~~g~~~~~s~~HaW~ag~~~~l~~~ilGI~p~~pg~~~~~i~P~l~-~-l~~~~~~-~~t~~G-~I~~~w~ 677 (739)
T 3cih_A 602 EESGTQHLAMYGRPYGKSLCHAWGASPIYLLGKYYLGVKPTKEGYKEFAVSPVLG-G-LKWMEGT-VPTPNG-DIHVYMD 677 (739)
T ss_dssp TCCGGGGGCBTTBTTCSCSSBGGGCTHHHHHHHHTSCEEEEEGGGTEEEECCCCT-T-CSEEEEE-EEETTE-EEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCC-C-CCEEEEE-EECCCE-EEEEEEE
T ss_conf 5677634343566667654532344169999998850676899862899996689-9-7779999-976974-4999997
Q ss_pred CCCEEEEEEEECCCCCCCCEEEEEECC--------------CEEEEEECCCCEEEEEEECCCCCCCC
Q ss_conf 890799999968999710002454117--------------71899983698099991033323334
Q 003571 754 DGDLHEVGIYSNYSNNDHDSFKTLHYR--------------GTSVKVNLSAGKIYTFNRQLKCTNLH 806 (810)
Q Consensus 754 ~g~l~~v~i~s~~~~~~~~~~~~~~~~--------------~~~~~~~~~~G~~~~i~~~~~~~~~~ 806 (810)
..++ .+++ - .++.+ |.+|.. .+..+|....|+.|+|.-+++.-.-|
T Consensus 678 ~~~~-~v~v--P-~~~a~---v~lp~~~~~~~~~~~~~~~~sG~y~f~~~~~~~~~~~~~~~~~~~~ 737 (739)
T 3cih_A 678 NKTI-KVKA--T-EGKGY---LTIQSRRQPKANMGTVEKVSEGVWRLWIDSPEERIVTYRLEGHHHH 737 (739)
T ss_dssp SSEE-EEEE--S-SCEEE---EEEECSSCCEESSSCEEEEETTEEEEEECSSSCEEEECCC------
T ss_pred CCEE-EEEE--C-CCCEE---EEECCEECEECCCCEEEEECCCEEEEEECCCCEEEEEEEECCCCCC
T ss_conf 1589-9993--7-98459---9978820110137459980585599996699479999995356666
No 6
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=1.00 E-value=1 Score=87.19 Aligned_cols=440 Identities=13% Similarity=0.079 Sum_probs=206.2
Q ss_pred CEEEEECCCEEEEEE--EEEECCCC-C--CCCCCCCCCCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHCCEEEEEC
Q ss_conf 908996793899999--96406889-9--99999999994999999999856-099999999999999973423229965
Q 003571 240 KKLKVEGSDWAVLLL--VASSSFDG-P--FINPSDSKKDPTSESMSALQSIR-NLSYSDLYTRHLDDYQKLFHRVSIQLS 313 (810)
Q Consensus 240 ~~l~v~~a~~v~i~~--~~~T~~~~-~--~~~~~~~~~d~~~~~~~~l~~a~-~~~y~~l~~~H~~~w~~lw~r~~i~l~ 313 (810)
.++.|.++.++.|++ ..+.+-.. . +..+ +..-.+.+.+.+++.. ...+++.+++-++.|+.+-++..|+.+
T Consensus 251 ~~i~L~PGe~~~i~f~lG~~~~~~~~~~~~~~~---~~~~~e~a~~li~ky~~~~~~~~al~~~~~yW~~~l~~~~v~tp 327 (822)
T 3rrs_A 251 VAVSLAPGESRELVYVLGYVENPDEEKWADDAK---QVVNKERAHALLSRFATSEQTDAAFAALKDYWTDLLSTYSVSSN 327 (822)
T ss_dssp EEEEECTTCEEEEEEEEEEEECCGGGSBSSTTS---CSBCCHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHSCSEEEEES
T ss_pred EEEEECCCCEEEEEEEEEEECCCCCCCCCCCCC---CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCC
T ss_conf 999989999799999999978854333442223---42349999999999639588999999999999998667040488
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89987645667666668998388875014899958999999999898762389999-89997302589999998998632
Q 003571 314 RSPKDIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLISSSRPGT-QVANLQGIWNEDLSPTWDSAPHV 392 (810)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~pt~~rl~~~~~~~d~~L~~~~f~~grYlLisssR~g~-~P~~LqGlWn~~~~~~W~g~yh~ 392 (810)
. +.+.. +......|....-...+|.++ +..+. ..+|+ +-
T Consensus 328 d---------------------~~~d~--------~~N~Wl~~q~~~~~~~~rs~s~~~~G~--------~~~~G---~R 367 (822)
T 3rrs_A 328 D---------------------EKLDR--------MVNIWNQYQCMVTFNMSRSASFFETGI--------GRGMG---FR 367 (822)
T ss_dssp C---------------------HHHHH--------HHHTHHHHHHHHHHHHTTSBSSSSBSC--------CCCEE---HH
T ss_pred C---------------------HHHHH--------HHHHHHHHHHHHHHHHHCCCCEEECCC--------CCCCC---HH
T ss_conf 2---------------------88889--------999888886899977614735032588--------78883---28
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 23332311222379934645999999999679899999976299756983017867777889998522237367899999
Q 003571 393 NINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCT 472 (810)
Q Consensus 393 niN~qm~ywp~~~~nl~e~~~~l~~~~~~~l~~~r~~A~~~yG~~G~~~~~~td~wg~~~p~~~~~~~~~~~~~~awla~ 472 (810)
|. .|..+ ++....||+++..+.... .. ...+|-+.|+-...-+. +. ... . ..|.-...|+..
T Consensus 368 D~-~qd~~--~~~~~~pe~ar~~il~~~----------~~-Q~~dG~v~h~~~p~~~~-g~-~~~-~-~~~~D~~lWl~~ 429 (822)
T 3rrs_A 368 DS-NQDLL--GFVHLIPERARERIIDIA----------ST-QFADGSAYHQYQPLTKR-GN-NDI-G-SGFNDDPLWLIA 429 (822)
T ss_dssp HH-HHHHH--HHTTTCHHHHHHHHHHHH----------TT-CCTTSCCCSEEETTTTE-EC-TTT-C-SCBTTHHHHHHH
T ss_pred HH-HHHHH--HHHHCCHHHHHHHHHHHH----------HH-HCCCCCCCCEECCCCCC-CC-CCC-C-CCCCCHHHHHHH
T ss_conf 99-99999--998309999999999999----------86-35268644355686788-86-679-9-860260739999
Q ss_pred HHHHHHHHCCCHHHHHH------------HHHHHHHHHHHHHHHHHCCCCCCEEEEC-CCC-----------CC-CC-CC
Q ss_conf 99999864398999975------------2089999999999885203899919988-998-----------88-88-76
Q 003571 473 HLWEHYNYTMDRDFLEK------------RAYPLLEGCASFLLDWLIEGHDGYLETN-PST-----------SP-EH-EF 526 (810)
Q Consensus 473 ~lw~yY~~T~D~~fL~~------------~~yP~l~~~A~F~~~~l~~~~~G~~~~~-ps~-----------sP-E~-~~ 526 (810)
.+++|++.|||.+||++ ..|+-++.+.+|...+. +++|-..++ .+. .+ +. ..
T Consensus 430 av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~--g~~GLp~~g~gDWnD~ln~~~~~~~vg~~~~~ 507 (822)
T 3rrs_A 430 GTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHR--GPHGLPLIGRADWNDCLNLNCFSTTPGESFQT 507 (822)
T ss_dssp HHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSB--CTTSSBBCBTCSSSTTCCTTCCCCSTTCCTTT
T ss_pred HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
T ss_conf 9999999879899998665554066544539999999999998537--99998366778621110544334556642333
Q ss_pred CCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC-CCC-CCCCC--EEEECCCCC---
Q ss_conf 789-9985322259189999999999999999999387926999999998089999-987-99983--443246789---
Q 003571 527 IAP-DGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRP-TKI-AEDGS--IMEWAQDFK--- 598 (810)
Q Consensus 527 ~~~-~g~~~~~~~n~t~d~~~ir~ll~~~~~a~~~Lg~~~~~~~~~w~~~~~~L~p-~~i-~~~G~--l~ew~~~~~--- 598 (810)
..| .| ..--+.+.++++...+..+.++++.+|. .+..++|++.+++|.. +.- .=+|. +.-...+..
T Consensus 508 ~~p~~~----~~Gesv~~~al~y~AL~~~a~lA~~~G~--~~~A~~~~~~A~~lk~a~~~~~Wdg~~y~ra~d~dg~~~g 581 (822)
T 3rrs_A 508 TENQAG----GVAESTFIAAQFVLYGEQYAELAARRGL--ADVADRARGHVAEMRDALLTDGWDGSWFLRAYDYYGNPIG 581 (822)
T ss_dssp CCSSCC----CCCEEHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHTTTBCSSSBCCEECTTSCEES
T ss_pred CCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
T ss_conf 466657----8402699999999999999999998599--6899999999999999999864676613898958898866
Q ss_pred --CCCCCCCC-CCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHH-----C------------------------C--
Q ss_conf --99888873-0000235899877988----9977999999997440-----8------------------------9--
Q 003571 599 --DPEVHHRH-LSHLFGLFPGHTITIE----KNPDLCKAAEKTLQKR-----G------------------------E-- 640 (810)
Q Consensus 599 --~~~~~hrh-~s~L~~l~P~~~i~~~----~~p~l~~aa~~tl~~r-----g------------------------~-- 640 (810)
..++.+-. .++-+.++-+ ..+++ .++ ..+.+..+++.+ | .
T Consensus 582 s~~~~~~~i~~~~q~~avlsG-ia~~e~~~~~~~-~a~~al~~v~~~L~t~~Girll~p~f~~~~~~~g~~~~Y~pg~~e 659 (822)
T 3rrs_A 582 TDAHDEGKIWIEPQGFAVMAG-VGVGEGPQDTDA-PAIKALDSVNEMLATDHGMVLQYPAYTTYQVHMGEVSTYPPGYKE 659 (822)
T ss_dssp CTTSSSCCEEHHHHHHHHHTT-TTCCSSTTCTTS-HHHHHHHHHHHHTEETTEEBSEESCCSSCCTTSTTGGGSCTTBTT
T ss_pred CCCCCCCEEEECCCHHHHHCC-CCCCCCCCCHHH-HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 667877568733513675218-888112442279-999999999987089876997278855556787730045897620
Q ss_pred CCC--CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCCCC-CC-CCCCCCCCC---CHHHHHHHH
Q ss_conf 999--80799999998752993699999999862239765--5557898545654-58-999622540---049999999
Q 003571 641 EGP--GWSITWKTALWARLHDQEHAYRMVKRLFNLVDPEH--EKHFEGGLYSNLF-AA-HPPFQIDAN---FGFTAAVAE 711 (810)
Q Consensus 641 ~~s--gws~~~~a~~~ARLgd~~~A~~~l~~~l~~~~~~~--~~~~~~~~~~nl~-~~-h~pfqidgn---~G~~agi~e 711 (810)
.+. ....+|.++..|++|++++|++++..+.......+ .....-..+++.. .. +|.+.--++ .|.++-+.-
T Consensus 660 nG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~G~~~~~w~tGsa~w~~~ 739 (822)
T 3rrs_A 660 NGGIFCHNNPWVIIAETVVGRGGRAFDYYKRITPAYREDISDVHRLEPYVYAQMIAGKEAVRHGEAKNSWLTGTAAWNFV 739 (822)
T ss_dssp BTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHCHHHHGGGHHHHCSCSSSCEEEECCTTSTTTTCEEEESSSTHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 16555217899999999859978999999873702012025762658679835534667887788613455546899999
Q ss_pred HHHH------CCCCEEEECCCCCCCCCCCCEEECEEEECC-EEEEEEE
Q ss_conf 8720------029928977999900126701202576311-7999998
Q 003571 712 MLVQ------STLNDLYLLPALPWDKWSSGCVKGLKARGG-ETVSICW 752 (810)
Q Consensus 712 mLlq------s~~g~i~llPalP~~~W~~g~~~gL~arG~-~~V~~~w 752 (810)
+++| -..+.+++-|+|| +.|+..+++ ++.+|. +.|.+..
T Consensus 740 ~lve~~LGlr~~~~~L~i~P~LP-~~w~~~~~~-~~~~g~~~~I~v~~ 785 (822)
T 3rrs_A 740 TVSQYLLGVRPEYDGLVVDPQIG-PDVPSFTVT-RVARGATYEITVTN 785 (822)
T ss_dssp HHHHTTSCEEECSSEEEECCCCC-TTCCEEEEE-EEETTEEEEEEEEC
T ss_pred HHHHHEEEEEEECCEEEEECCCC-CCCCCEEEE-EEECCEEEEEEEEE
T ss_conf 99986776899899899958898-767868999-99999999999996
No 7
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=1.00 E-value=1 Score=84.46 Aligned_cols=608 Identities=11% Similarity=0.082 Sum_probs=274.8
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEC----CCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 06865887672222433489510000288882449921----45201289999999981366899999997399789999
Q 003571 14 KITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLN----EDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATA 89 (810)
Q Consensus 14 ~l~~~~Pa~~w~ealpiGNG~lGamv~G~~~~e~i~ln----e~tlWsg~~~~~~~~~~~~~l~~~r~~~~~g~~~~a~~ 89 (810)
...++.|.+-....-.||||+.|+||--.-..-+..-| ..|=|.--|. ..+++..=.| |+
T Consensus 12 ~y~~~~~~tp~p~~n~l~n~~~~~~~s~~g~gys~~~~~~~~~~t~w~~d~~-~d~~g~~~yl---rd------------ 75 (807)
T 1v7w_A 12 EYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYNSPEYNRVTKFRPNAT-FDRPGHYVYL---RD------------ 75 (807)
T ss_dssp EEEESCSCCSSCCEEEECSSSEEEEEETTSBEEEEESCTTTCBCBCCBCSSS-SCBSBCEEEE---EE------------
T ss_pred EEEECCCCCCCCCEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCC-CCCCEEEEEE---EE------------
T ss_conf 7998789999972589676961499917996152136767585578888888-7988469999---98------------
Q ss_pred HHHHHCC-CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEECCEEEEEEEEEECCCCEEEEEEEE--C
Q ss_conf 9984419-999876545446998138988667688289975356389999987998999999873599789999990--8
Q 003571 90 ASVKLFG-HPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISG--S 166 (810)
Q Consensus 90 l~~~~~g-~~~~~y~~lG~l~i~~~~~~~~~~~~~Y~R~LDl~~g~~~~~~~~~g~~~~re~f~S~pd~vlv~~i~~--~ 166 (810)
..-| -++.++||.+. ..... .|.-+-.+ +..+-+++.+|+..+.+.||+..+++.+.+++- .
T Consensus 76 ---~~~~~~ws~~~~p~~~--------~~~~~--~y~~~~~~--~~~~~~~~~~gi~~~~~~fV~~~~~~~v~~~~l~N~ 140 (807)
T 1v7w_A 76 ---DDSGDYWSISWQPVAK--------SLDEA--QYQIRHGL--SYSKFQCDYNGIHARKTLFVPKGEDAEIWDVVIKNT 140 (807)
T ss_dssp ---TTTCCEEESSSTTTTC--------CTTTE--EEEEEEET--TEEEEEEEETTEEEEEEEECCTTSSEEEEEEEEEEC
T ss_pred ---CCCCCEECCCCCCCCC--------CCCCC--EEEEEECC--CEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEC
T ss_conf ---9999989998210578--------88886--08999708--679999953998999999997899979999999989
Q ss_pred CCC--CEEEEEEECCCCCCC-------------EEEE-CCCEEEEEEECCCCCCCCCCCCCCCCCCE---------EEEE
Q ss_conf 998--449999835778887-------------0220-69869999844998899998889999940---------7999
Q 003571 167 ESG--SLSFNVSLDSLLDNH-------------SYVN-GNNQIIMEGRCPGKRIPPKANANDDPKGI---------QFSA 221 (810)
Q Consensus 167 ~~~--~l~~~~~l~~~~~~~-------------~~~~-~~~~l~~~g~~~~~~~~~~~~~~~~~~g~---------~f~~ 221 (810)
... .|++..-++.-.... +... +.+.+. ........ ....-. .|..
T Consensus 141 s~~~r~L~l~~y~e~~l~~~~~d~~~f~~~~~~~~~~~~~~~i~-~~~~~~~~--------~~~~~~f~~~~~~~~~~~~ 211 (807)
T 1v7w_A 141 SDQVRTISAFSFVEFSFSHIQSDNQNHQMSLYSAGTAYRPGLIE-YDLYYNTD--------DFEGFYYLASTFDPDSYDG 211 (807)
T ss_dssp SSSCEEEEEEEECBBCCSSHHHHHSCHHHHTTSEEEEEETTEEE-EEETTCCC--------TTTTEEEEEESSCCSEEEE
T ss_pred CCCCEEEEEEEEEEECCCCHHHHHHHHHCCEEEEEEECCCCEEE-EECCCCCC--------CCCCEEEEEECCCCCCEEC
T ss_conf 79948999998898614775988786422479999814588899-98889977--------7786299995898762570
Q ss_pred EEE-EEE-------------------ECCCEEEEEECCCEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 999-999-------------------089603998319908996793899999964068899999999999949999999
Q 003571 222 ILE-IKI-------------------SDDRGTISALEDKKLKVEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSA 281 (810)
Q Consensus 222 ~~~-v~~-------------------~g~~G~~~~~~~~~l~v~~a~~v~i~~~~~T~~~~~~~~~~~~~~d~~~~~~~~ 281 (810)
.-. .+. .+..+.......-++.|.+..+++|.+.+... .+ .+.+.
T Consensus 212 dr~~fiG~~~~~~~P~a~~~g~ls~~~~~~~dp~~al~~~i~L~Pge~~~l~~~lg~~------------~~---~~~~l 276 (807)
T 1v7w_A 212 QRDRFLGLYRDEANPLAVEQGRCSNSAQTCYNHCGSLHKQFTLQPGEEIRFAYILGIG------------KG---NGERL 276 (807)
T ss_dssp EHHHHHCTTCCTTSCHHHHHTSCCCBCCBSSCEEEEEEEEEEECTTCEEEEEEEEEES------------TT---HHHHH
T ss_pred CHHHEEECCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEE------------CH---HHHHH
T ss_conf 5799784897834684223689988737888968999889998999989999999994------------65---89999
Q ss_pred HHHHHC-CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 998560-9999999999999997342322996589987645667666668998388875014899958999999999898
Q 003571 282 LQSIRN-LSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYL 360 (810)
Q Consensus 282 l~~a~~-~~y~~l~~~H~~~w~~lw~r~~i~l~~~~~~~~~~~~~~~~~~~~pt~~rl~~~~~~~d~~L~~~~f~~grYl 360 (810)
+++... ..+++.+++..+.|+.+-++..|..+. + .-+..+. ..+.+..-+
T Consensus 277 ~~~~~~~~~~~~~l~~~~~~w~~~L~~l~v~T~d-~----------------~~~~~~~------------~w~~~q~l~ 327 (807)
T 1v7w_A 277 REHYQDVANIDAAFAAIKAHWDERCAKFQVKSPN-Q----------------GLDTMIN------------AWTLYQAET 327 (807)
T ss_dssp HHHTTSHHHHHHHHHHHHHHHHHHHTTEEEECSC-H----------------HHHHHHT------------THHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHCEEECCCC-H----------------HHHHHHH------------CCHHHHHHH
T ss_conf 9997397889999999999999987466867887-8----------------8999873------------007778777
Q ss_pred HHHCCCCCCC-CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 7623899998-99973025899999989-986322333231122237993464599999999967989999997629975
Q 003571 361 LISSSRPGTQ-VANLQGIWNEDLSPTWD-SAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASG 438 (810)
Q Consensus 361 LisssR~g~~-P~~LqGlWn~~~~~~W~-g~yh~niN~qm~ywp~~~~nl~e~~~~l~~~~~~~l~~~r~~A~~~yG~~G 438 (810)
....+|..++ ..+.. ..|+ =|. +.-..++....|++++..+..+... ..-+|
T Consensus 328 ~~i~~~~a~~~~~g~~--------~~~G~RD~-------~~~~~~l~~~~p~~ar~~l~~~~~~-----------Q~~~G 381 (807)
T 1v7w_A 328 CVVWSRFASFIEVGGR--------TGLGYRDT-------AQDAISVPHANPEMTRKRIVDLLRG-----------QVKAG 381 (807)
T ss_dssp HHHHCSSCSSSCCSSC--------CSEEHHHH-------HHHTTSCTTTCHHHHHHHHHHHHHT-----------BCTTS
T ss_pred HHHHHCCCHHEECCCC--------CCCCCHHH-------HHHHHHHHHCCHHHHHHHHHHHHHC-----------CCCCC
T ss_conf 7666146003002787--------75570687-------4888887612999999999999811-----------60189
Q ss_pred EEECCCC----C-------CC------CCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH------
Q ss_conf 6983017----8-------67------77788-99985222373678999999999986439899997520899------
Q 003571 439 WVIHHKT----D-------IW------AKSSA-DRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPL------ 494 (810)
Q Consensus 439 ~~~~~~t----d-------~w------g~~~p-~~~~~~~~~~~~~~awla~~lw~yY~~T~D~~fL~~~~yP~------ 494 (810)
-+.|... + +. +..+. ....+.-..|.-...|+...+|+||++|||.+||+ +.||.
T Consensus 382 ~~~p~~~p~~~~~~~g~~~~~~~~~~~g~~~~~~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~-e~~p~~~~~~~ 460 (807)
T 1v7w_A 382 YGLHLFDPDWFDPEKEDVAPSKSPTVVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFD-QMIPYADGGEA 460 (807)
T ss_dssp CBCSEECGGGGCC----------------------CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGG-CEEECTTSCEE
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH-CCCCCCCCCCC
T ss_conf 84431240113333355688666423467775144338877726566589999999999869899993-42443358961
Q ss_pred -----HHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf -----999999998852038999199889988888767899985322259189999999999999999999387926999
Q 003571 495 -----LEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALV 569 (810)
Q Consensus 495 -----l~~~A~F~~~~l~~~~~G~~~~~ps~sPE~~~~~~~g~~~~~~~n~t~d~~~ir~ll~~~~~a~~~Lg~~~~~~~ 569 (810)
|+.+.+|...+. +++|....... .. . ++.... .--+++.++++...+..+.++++.||. .+..
T Consensus 461 ~v~e~~~~~~~~~~~~~--~~~GL~~~~~~---DW--~--D~~~~~-~g~~v~~~a~~y~al~~~a~la~~lG~--~~~a 528 (807)
T 1v7w_A 461 SVYEHMKAALDFSAEYV--GQTGICKGLRA---DW--N--DCLNLG-GGESSMVSFLHFWALQEFIDLAKFLGK--DQDV 528 (807)
T ss_dssp EHHHHHHHHHHHHHHSB--CTTSCBEEETC---SS--S--TTCCCE-EEEEHHHHHHHHHHHHHHHHHHHHHTC--HHHH
T ss_pred HHHHHHHHHHHHHHHCC--CCCCCCCCCCC---CC--C--CCCCCC-CCEEHHHHHHHHHHHHHHHHHHHHCCC--HHHH
T ss_conf 49999999999999647--99898303788---88--7--767778-870336999999999999999998499--8999
Q ss_pred HHHHHHCCCCCC-CC---CCCCCC-EE-EECCCC---CCC-CCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999998089999-98---799983-44-324678---999-888873--0000235899877988997799999999744
Q 003571 570 EKVLKSLPRLRP-TK---IAEDGS-IM-EWAQDF---KDP-EVHHRH--LSHLFGLFPGHTITIEKNPDLCKAAEKTLQK 637 (810)
Q Consensus 570 ~~w~~~~~~L~p-~~---i~~~G~-l~-ew~~~~---~~~-~~~hrh--~s~L~~l~P~~~i~~~~~p~l~~aa~~tl~~ 637 (810)
++|++.+++|.. +. .+++|. .. -...+. ... ....+. .+..++++ .+. .+++..+.+.+.+..
T Consensus 529 ~~~~~~A~~lk~~~~~~~w~~~~~~f~~~~~~d~~~~g~~~~~~~~~~~~~~~~al~-~g~----~~~e~a~~~l~~v~~ 603 (807)
T 1v7w_A 529 NTYTEMAANVREACETHLWDDEGGWYIRGLTKNGDKIGTAQQQEGRVHLESNTLAVL-SGL----ASQERGEQAMDAVDE 603 (807)
T ss_dssp HHHHHHHHHHHHHHHHHSEETTTTEECCEECTTSCEESCTTCSSCCEEHHHHHHHHH-TTC----SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH-HCC----CCHHHHHHHHHHHHH
T ss_conf 999999999999999845477788654324157977477667788571121478872-178----999999999999998
Q ss_pred -----HCC-----------C---------------CCCC--HHHHHHHHHHHCCCHHHHHHHHHHHHHC-CCCCC-CCCC
Q ss_conf -----089-----------9---------------9980--7999999987529936999999998622-39765-5557
Q 003571 638 -----RGE-----------E---------------GPGW--SITWKTALWARLHDQEHAYRMVKRLFNL-VDPEH-EKHF 682 (810)
Q Consensus 638 -----rg~-----------~---------------~sgw--s~~~~a~~~ARLgd~~~A~~~l~~~l~~-~~~~~-~~~~ 682 (810)
.|. . +.-| ..+|.+...+++|+.++|+++++..... ..... ....
T Consensus 604 ~L~~~~G~~~~~p~~~~~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~G~~d~A~~l~~~~~p~~~~~~~~~~~~ 683 (807)
T 1v7w_A 604 HLFSPYGLHLNAPSFSTPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDALNPYNQNDIIEKRIA 683 (807)
T ss_dssp HHEETTEECSEESCCCSCCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHHHHHHHHHCGGGGTTCHHHHCS
T ss_pred HCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHCC
T ss_conf 61898763635876445676776233268864234664522389999999984999999999998585644101566334
Q ss_pred CCCCCC-CCCCCCCCCCCCCCC----HHHHHHHHHHHHC------CCCEEEECCCCCCCCCCCCEEECEEEECC-EEEEE
Q ss_conf 898545-654589996225400----4999999987200------29928977999900126701202576311-79999
Q 003571 683 EGGLYS-NLFAAHPPFQIDANF----GFTAAVAEMLVQS------TLNDLYLLPALPWDKWSSGCVKGLKARGG-ETVSI 750 (810)
Q Consensus 683 ~~~~~~-nl~~~h~pfqidgn~----G~~agi~emLlqs------~~g~i~llPalP~~~W~~g~~~gL~arG~-~~V~~ 750 (810)
..+.+. ...+...|..-.+.. |..+-+..+|++. ..+.|.|.|.|| ..|...+++ .+.+|+ +.|.+
T Consensus 684 ep~~~~~~~~~~~~~~~~~~~~aW~~gsa~w~~~~l~~~~lGi~p~~~~l~i~P~lP-~~~~~~~~~-~~~~~~~~~i~v 761 (807)
T 1v7w_A 684 EPYSYVQFIMGRDHQDHGRANHPWLTGTSGWAYFAVTNYILGVQSGFTGLSVDPCIP-SDWPGFEVT-RQWRGATYHIQV 761 (807)
T ss_dssp CTTSCEEEECCTTSTTTTCEEEESSCTHHHHHHHHHHHTTSCEECCSSCBEECCBCC-TTCCEEEEE-EEETTEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCEEEECCCC-CCCCCEEEE-EEECCEEEEEEE
T ss_conf 865330303576677788767764365899999999998645345189179805798-877977999-998997899999
Q ss_pred E
Q ss_conf 9
Q 003571 751 C 751 (810)
Q Consensus 751 ~ 751 (810)
.
T Consensus 762 ~ 762 (807)
T 1v7w_A 762 E 762 (807)
T ss_dssp E
T ss_pred E
T ss_conf 7
No 8
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=1.00 E-value=1 Score=82.22 Aligned_cols=442 Identities=12% Similarity=0.092 Sum_probs=207.7
Q ss_pred CCEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHCCEEEEECCCCC
Q ss_conf 990899679389999996406889999999999994999999999856-0999999999999999734232299658998
Q 003571 239 DKKLKVEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIR-NLSYSDLYTRHLDDYQKLFHRVSIQLSRSPK 317 (810)
Q Consensus 239 ~~~l~v~~a~~v~i~~~~~T~~~~~~~~~~~~~~d~~~~~~~~l~~a~-~~~y~~l~~~H~~~w~~lw~r~~i~l~~~~~ 317 (810)
..++.|.++.++.|++...-..+...++.......-.+.+.+.+++.. ...+++.+++-.+.|+.+-+++.|+.+
T Consensus 245 ~~~i~L~PGe~~~i~f~lG~~~~~~~~~~~~~~~~~~e~a~~l~~ky~~~~~~~~a~~~~~~yW~~~l~~~~v~tp---- 320 (811)
T 3qde_A 245 SIEIELNPGEQKEYVFIIGYVENKDEEKWESKGVINKKKAYEMIEQFNTVEKVDKAFEELKSYWNALLSKYFLESH---- 320 (811)
T ss_dssp EEEEEECTTCEEEEEEEEEEEECCGGGSEEETTEECCHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHTTEEEECS----
T ss_pred EEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCC----
T ss_conf 8899999999899999999978854333333343359999999999729268999999999999998676675487----
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH---HHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 764566766666899838887501489995899999---999989876238999989-9973025899999989986322
Q 003571 318 DIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVELL---FQFGRYLLISSSRPGTQV-ANLQGIWNEDLSPTWDSAPHVN 393 (810)
Q Consensus 318 ~~~~~~~~~~~~~~~pt~~rl~~~~~~~d~~L~~~~---f~~grYlLisssR~g~~P-~~LqGlWn~~~~~~W~g~yh~n 393 (810)
|+.+..++ ..|........+|.+++- .+.. .+|+ +-|
T Consensus 321 ----------------------------d~~~d~~~N~wl~~q~~~~~~~~rs~s~~~~g~~--------~~~G---~RD 361 (811)
T 3qde_A 321 ----------------------------DEKLNRMVNIWNQYQCMVTFNMSRSASYFESGIG--------RGMG---FRD 361 (811)
T ss_dssp ----------------------------CHHHHHHHHTHHHHHHHHHHHHTTSBSSSSBSSS--------CCEE---HHH
T ss_pred ----------------------------CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC--------CCCC---CHH
T ss_conf ----------------------------0889999999998878988555047664633776--------8883---189
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 33323112223799346459999999996798999999762997569830178677778899985222373678999999
Q 003571 394 INLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTH 473 (810)
Q Consensus 394 iN~qm~ywp~~~~nl~e~~~~l~~~~~~~l~~~r~~A~~~yG~~G~~~~~~td~wg~~~p~~~~~~~~~~~~~~awla~~ 473 (810)
. .|..+ ++....||+++..+... |.. ...+|-+.|+-. ++...+. ... . ..|.-...|+...
T Consensus 362 ~-~qd~~--~~~~~~p~~~r~~il~~----------~~~-Q~~dG~~~h~~~-p~~~~g~-~~~-~-~~~~D~~lW~i~a 423 (811)
T 3qde_A 362 S-NQDLL--GFVHQIPERARERLLDL----------AAT-QLEDGSAYHQYQ-PLTKKGN-NEI-G-SNFNDDPLWLILA 423 (811)
T ss_dssp H-HHHHH--TTTTTCHHHHHHHHHHH----------HTT-BCTTSCBCSEEC-TTTCCEE-CTT-C-CCBTTHHHHHHHH
T ss_pred H-HHHHH--HHHHCCHHHHHHHHHHH----------HHH-CCCCCCCCCEEC-CCCCCCC-CCC-C-CCCCCCHHHHHHH
T ss_conf 8-89999--98732999999999999----------853-165787353662-7778887-789-9-8725606179999
Q ss_pred HHHHHHHCCCHHHHHH------------HHHHHHHHHHHHHHHHHCCCCCCEEEECC-CCC-----------C-CC-CCC
Q ss_conf 9999864398999975------------20899999999998852038999199889-988-----------8-88-767
Q 003571 474 LWEHYNYTMDRDFLEK------------RAYPLLEGCASFLLDWLIEGHDGYLETNP-STS-----------P-EH-EFI 527 (810)
Q Consensus 474 lw~yY~~T~D~~fL~~------------~~yP~l~~~A~F~~~~l~~~~~G~~~~~p-s~s-----------P-E~-~~~ 527 (810)
+++|+++|||.+||++ ..|+-++.+.+|...++ +++|-..++. +.- + |. ...
T Consensus 424 v~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~--g~~GL~~~g~~DWnD~ln~~~~~~~vg~~~~~v 501 (811)
T 3qde_A 424 TAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNL--GPHGLPLIGRADWNDCLNLNCFSTVPDESFQTT 501 (811)
T ss_dssp HHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCB--CTTSSBBCBTCSSSTTCCSSCCCCCTTSCTTTS
T ss_pred HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
T ss_conf 999998878899998565554177655449999999999998548--988885556687233206533345567422334
Q ss_pred CCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC-CCC-CCCCC--EEEECCCCC----
Q ss_conf 899-985322259189999999999999999999387926999999998089999-987-99983--443246789----
Q 003571 528 APD-GKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRP-TKI-AEDGS--IMEWAQDFK---- 598 (810)
Q Consensus 528 ~~~-g~~~~~~~n~t~d~~~ir~ll~~~~~a~~~Lg~~~~~~~~~w~~~~~~L~p-~~i-~~~G~--l~ew~~~~~---- 598 (810)
.|. | ..--+++.+++....+..+.++++.||. .+..++|++.+++|.. +.- --+|. +.-...+..
T Consensus 502 tp~~~----~~gesv~~~al~y~AL~~~a~lA~~lGd--~~~A~~~~~~A~~lk~a~~~~~Wdg~~y~ra~~~dg~~~gs 575 (811)
T 3qde_A 502 TSKDG----KVAESVMIAGMFVFIGKDYVKLCEYMGL--EEEARKAQQHIDAMKEAILKYGYDGEWFLRAYDDFGRKVGS 575 (811)
T ss_dssp CCCCC----SSCEEHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHSBCSSSBCCEECTTSCEESS
T ss_pred CCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
T ss_conf 66657----8514799999999999999999998499--79999999999999999998535867689999689988776
Q ss_pred -CCCCCC-CCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHH-HCC--------------------------CCCCC--H
Q ss_conf -998888-730000235899877988-997799999999744-089--------------------------99980--7
Q 003571 599 -DPEVHH-RHLSHLFGLFPGHTITIE-KNPDLCKAAEKTLQK-RGE--------------------------EGPGW--S 646 (810)
Q Consensus 599 -~~~~~h-rh~s~L~~l~P~~~i~~~-~~p~l~~aa~~tl~~-rg~--------------------------~~sgw--s 646 (810)
...+.+ .-.++-+.++.+ ..+++ .....++++.+.|.. .|. .++-| .
T Consensus 576 ~~~~~~qi~~~~q~~avlsG-ia~~e~ra~~~m~~v~~~L~t~~Glrll~p~f~~~~~d~g~~~~Y~pg~~enG~iy~H~ 654 (811)
T 3qde_A 576 KENEEGKIFIESQGFCVMAE-IGLEDGKALKALDSVKKYLDTPYGLVLQNPAFTRYYIEYGEISTYPPGYKENAGIFCHN 654 (811)
T ss_dssp TTSSSCCEESHHHHHHHHTT-CSSSSSHHHHHHHHHHHHHCCTTCCCSEESCCCSCCTTTGGGGTSCTTSTTTTCEEHHH
T ss_pred CCCCCCEEEECCHHHHHHHC-CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCHH
T ss_conf 67877558724345798708-88706899999999998708974157606875555778772013489760006554007
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCCCC-CC-CCCCCCCC---CCHHHHHHHHHHHH----
Q ss_conf 99999998752993699999999862239765--5557898545654-58-99962254---00499999998720----
Q 003571 647 ITWKTALWARLHDQEHAYRMVKRLFNLVDPEH--EKHFEGGLYSNLF-AA-HPPFQIDA---NFGFTAAVAEMLVQ---- 715 (810)
Q Consensus 647 ~~~~a~~~ARLgd~~~A~~~l~~~l~~~~~~~--~~~~~~~~~~nl~-~~-h~pfqidg---n~G~~agi~emLlq---- 715 (810)
.+|.++..|++|++++|++++..+.......+ .....-..+++.. .. +|.+.--+ ..|.++-+.-|++|
T Consensus 655 ~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~Gr~~~~w~tGsa~w~~~~~ve~~lG 734 (811)
T 3qde_A 655 NAWIICAETVVGRGDMAFDYYRKIAPAYIEDVSDIHKLEPYVYAQMVAGKDAKRHGEAKNSWLTGTAAWNFVAISQWILG 734 (811)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHCGGGSGGGHHHHCSCTTSCEEEECCTTSTTTTCEEEESCSTHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCE
T ss_conf 89999999986997899999997480011000453176847852540135689878874445888999999999998525
Q ss_pred --CCCCEEEECCCCCCCCCCCCEEECEEEECC-EEEEEEE
Q ss_conf --029928977999900126701202576311-7999998
Q 003571 716 --STLNDLYLLPALPWDKWSSGCVKGLKARGG-ETVSICW 752 (810)
Q Consensus 716 --s~~g~i~llPalP~~~W~~g~~~gL~arG~-~~V~~~w 752 (810)
-..+.+.|-|+|| +.|+..+++ ++.+|. +.|.+..
T Consensus 735 l~~~~~~L~i~P~LP-~~w~~~~~~-~~~~g~~~~I~v~~ 772 (811)
T 3qde_A 735 VKPDYDGLKIDPCIP-KAWDGYKVT-RYFRGSTYEITVKN 772 (811)
T ss_dssp EEEETTEEEECCBCC-TTCCEEEEE-EEETTEEEEEEEEC
T ss_pred EEEECCEEEEECCCC-CCCCCEEEE-EEECCEEEEEEEEC
T ss_conf 589899799927388-556867999-99999999999984
No 9
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=1.00 E-value=1 Score=49.14 Aligned_cols=358 Identities=11% Similarity=0.047 Sum_probs=168.0
Q ss_pred EEEECCCCEEEEEEEEC--CEEEEEEEEEECCCCEEEEEEEEC--CCCCEEEEEEECCCCCCC----EEEECCCEEEEEE
Q ss_conf 99753563899999879--989999998735997899999908--998449999835778887----0220698699998
Q 003571 126 RELDLNTATARVKYSVG--NVEFTREHFSSNPDQVIVTKISGS--ESGSLSFNVSLDSLLDNH----SYVNGNNQIIMEG 197 (810)
Q Consensus 126 R~LDl~~g~~~~~~~~~--g~~~~re~f~S~pd~vlv~~i~~~--~~~~l~~~~~l~~~~~~~----~~~~~~~~l~~~g 197 (810)
|-++-.+-+.+++|+.+ +..++...|+...+++++.+++.. .++.+.+.+.+....... ...... . ...+
T Consensus 80 ~Y~~~~t~il~t~~~~~~g~~~v~~~df~p~~~~~lvr~v~~~n~~g~~v~l~~~~~p~~~~~~~~~~~~~~~-~-~~~~ 157 (1020)
T 1ulv_A 80 ELADPKALSYRQTTTDNAGRWRLTKTYVTDPRRSTVMLGVTFEVLDGGDYQLFVLSDPSLAGTSGGDTGSVTD-G-ALLA 157 (1020)
T ss_dssp EESCTTSSCEEEEEECTTSSEEEEEEEEECTTSSEEEEEEEEEECSSCCCEEEEEEEECGGGCSSSEEEEEET-T-EEEE
T ss_pred EEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCEEECC-C-CCCC
T ss_conf 9825998489999994899889999999749988899999999788983889999985046777787136513-3-2346
Q ss_pred ECC-CCCCCCCCCCCCCCCCEEEEEEE--------------------EEEEECCCEEEEEECCCEEEEECCCEEEEEEEE
Q ss_conf 449-98899998889999940799999--------------------999908960399831990899679389999996
Q 003571 198 RCP-GKRIPPKANANDDPKGIQFSAIL--------------------EIKISDDRGTISALEDKKLKVEGSDWAVLLLVA 256 (810)
Q Consensus 198 ~~~-~~~~~~~~~~~~~~~g~~f~~~~--------------------~v~~~g~~G~~~~~~~~~l~v~~a~~v~i~~~~ 256 (810)
... ......+.--.....-..|.+.. .+ ..+ |.+.. . ..+.+....+..+.+.+
T Consensus 158 ~~l~~~~~~~~~~l~~~~~~~~~~~gf~g~~d~~~d~~~~g~L~~~~~~-a~~--g~v~~-~-~~~~L~~ge~~~~~l~L 232 (1020)
T 1ulv_A 158 SDLADAATPVATALVSSVGFGAVANGYVGTSDGWTDLAADGRLDNASAT-AGP--GNISQ-T-GQIPLAAGGKTEFSLAL 232 (1020)
T ss_dssp EECCCTTSCEEEEEEETTCCSSEEEEETTTTSHHHHHHHHSSCCCCCSC-EEE--ESEEE-E-EEECCCSSSEEEEEEEE
T ss_pred CEEEEECCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCC-CCC--CCEEE-E-EEEEECCCCEEEEEEEE
T ss_conf 3499976873899964787530001333567505557653745777642-578--86158-8-99998899879999999
Q ss_pred EECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 40688999999999999499999999985609999999999999997342322996589987645667666668998388
Q 003571 257 SSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAE 336 (810)
Q Consensus 257 ~T~~~~~~~~~~~~~~d~~~~~~~~l~~a~~~~y~~l~~~H~~~w~~lw~r~~i~l~~~~~~~~~~~~~~~~~~~~pt~~ 336 (810)
.-.. . ...+...........+++++++.++.|+++-++..-.+...
T Consensus 233 ~~g~------------~-~~~~~~~~~~~~~~~~~~~l~~t~~~W~~wl~~~~~~v~~~--------------------- 278 (1020)
T 1ulv_A 233 GFGA------------D-TAEALATAKASLGTGYKKVSKSYTGEWKKYLNSLDAPATSL--------------------- 278 (1020)
T ss_dssp EEES------------S-HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCCCCTTC---------------------
T ss_pred EECC------------C-CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC---------------------
T ss_conf 9568------------7-42144442113441599999999999999997256666688---------------------
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCC--CCCCCCCCCCCC--CCCCCCCCCCCCCCHH
Q ss_conf 875014899958999999999898762389--9998999730258999--999899863223--3323112223799346
Q 003571 337 RVKSFQTDEDPSLVELLFQFGRYLLISSSR--PGTQVANLQGIWNEDL--SPTWDSAPHVNI--NLEMNYWQSLPCNLSE 410 (810)
Q Consensus 337 rl~~~~~~~d~~L~~~~f~~grYlLisssR--~g~~P~~LqGlWn~~~--~~~W~g~yh~ni--N~qm~ywp~~~~nl~e 410 (810)
+..+..++.+--.=|...... +|.+-+...--|-+.. ...|+ +|+.-| +.=+....+...+.+|
T Consensus 279 ---------~~~~~~~~~rSl~~Lk~l~~~~t~GaiiAS~t~p~~e~~gg~rn~d-gYry~W~RDaa~t~~all~~G~~e 348 (1020)
T 1ulv_A 279 ---------TGALRTQYDVSLMTVKSHEDKTFPGAFIASLTIPWGQAASAETHRE-GYHAVWARDMYQSVTALLAAGDEE 348 (1020)
T ss_dssp ---------CHHHHHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBCSSCCC-TTCSBCHHHHHHHHHHHHHHTCHH
T ss_pred ---------CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCC-CCCEECCCHHHHHHHHHHHCCCHH
T ss_conf ---------7789999999999999733788898189847888432457756899-775576044999999999859989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 459999999996798999999762997569830178677778899985222373-6789999999999864398999975
Q 003571 411 CQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWP-MGGAWLCTHLWEHYNYTMDRDFLEK 489 (810)
Q Consensus 411 ~~~~l~~~~~~~l~~~r~~A~~~yG~~G~~~~~~td~wg~~~p~~~~~~~~~~~-~~~awla~~lw~yY~~T~D~~fL~~ 489 (810)
.++..++|+.+... .-.|...| +-.+-| .+.|.--+ -..++....+|+|++ + | .
T Consensus 349 ~A~~~l~~L~~~Q~----------~~~G~~~~-~y~i~G-------~~~w~~~Q~D~~g~~l~~~~~~~~-~-d-----~ 403 (1020)
T 1ulv_A 349 AAARGVEWLFTYQQ----------QPDGHFPQ-TSRVDG-------TIGQNGIQLDETAFPILLANQIGR-T-D-----A 403 (1020)
T ss_dssp HHHHHHHHHHHHTC----------CTTSCCCS-CBCTTS-------CBCCCCCBTHHHHHHHHHHHHHTC-C-C-----H
T ss_pred HHHHHHHHHHHHHC----------CCCCCEEE-EEECCC-------CCCCCCCCCCCCHHHHHHHHHHHH-C-C-----H
T ss_conf 99999999999744----------78997426-895599-------737787447653699999999986-1-9-----7
Q ss_pred HHHH-HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 2089-999999999885203899919988998888876789998532225918999999999999999999938792699
Q 003571 490 RAYP-LLEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDAL 568 (810)
Q Consensus 490 ~~yP-~l~~~A~F~~~~l~~~~~G~~~~~ps~sPE~~~~~~~g~~~~~~~n~t~d~~~ir~ll~~~~~a~~~Lg~~~~~~ 568 (810)
..|| +++.+++|...+-- .|+... +....| -.+|+.++++..|..++++++.+|. .+.
T Consensus 404 ~~w~~~v~~al~~i~~~g~---------~~~~~~---WEe~~g-------~~~~t~~~~~~AL~~aa~lA~~~G~--~~~ 462 (1020)
T 1ulv_A 404 GFYRNELKPAADYLVAAGP---------KTPQER---WEETGG-------YSTSTLASQIAALAAAADIAGKNGD--AGS 462 (1020)
T ss_dssp HHHHHTHHHHHHHHHHHCS---------CBSBCT---TSSCCB-------EEHHHHHHHHHHHHHHHHHHHHTTC--HHH
T ss_pred HHHHHHHHHHHHHHHHHCC---------CCCHHH---HCCCCC-------CCHHHHHHHHHHHHHHHHHHHHCCC--HHH
T ss_conf 8899999999999998589---------977555---025577-------1799999999999999999998399--068
Q ss_pred HHHHHHHCCCCC
Q ss_conf 999999808999
Q 003571 569 VEKVLKSLPRLR 580 (810)
Q Consensus 569 ~~~w~~~~~~L~ 580 (810)
.++|++.+++|.
T Consensus 463 a~~w~~~Ad~i~ 474 (1020)
T 1ulv_A 463 AAVYRATADEWQ 474 (1020)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 10
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=1.00 E-value=1 Score=48.13 Aligned_cols=202 Identities=10% Similarity=0.109 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCEEEECCCC-CC-CCC------------------
Q ss_conf 89999999999864398999975208999999999988520389-9919988998-88-887------------------
Q 003571 467 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGH-DGYLETNPST-SP-EHE------------------ 525 (810)
Q Consensus 467 ~awla~~lw~yY~~T~D~~fL~~~~yP~l~~~A~F~~~~l~~~~-~G~~~~~ps~-sP-E~~------------------ 525 (810)
.+...+.+|+||+.|+|.+|+.+.....++.+++|+..--.++. .|-|...-.+ .+ |.-
T Consensus 182 la~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~ 261 (489)
T 2p0v_A 182 LCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASA 261 (489)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCS
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECC
T ss_conf 49999999999998598166679999999999999999854468989826760488765443568878856898861578
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC----CCCC---CCCCEEEECCCCC
Q ss_conf 67899985322259189999999999999999999387926999999998089999----9879---9983443246789
Q 003571 526 FIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRP----TKIA---EDGSIMEWAQDFK 598 (810)
Q Consensus 526 ~~~~~g~~~~~~~n~t~d~~~ir~ll~~~~~a~~~Lg~~~~~~~~~w~~~~~~L~p----~~i~---~~G~l~ew~~~~~ 598 (810)
|...+ .++.-.=-+++|+++.-.|+.+.+.++.++.+ .++.++|++.++.|.. +-+. +.|.+.-+..|..
T Consensus 262 fRPSD--Da~~yg~~ipSN~~a~v~L~~aaeia~~v~~d-~~la~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~ 338 (489)
T 2p0v_A 262 FRPSD--DATTFQFLVPSNFFAVTSLRKAAEILNTVNRK-PALAKECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGF 338 (489)
T ss_dssp BCTTS--CBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCC-HHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSS
T ss_pred CCCCC--CCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHCEECCCCCCCEEEEEECCC
T ss_conf 89987--51321816379999999999999999986437-8999999999999999999857766788750799985689
Q ss_pred -C-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------CC-------CCCCCHHHHHHHHHHH---CCC
Q ss_conf -9-988887300002358998779889977999999997440-------89-------9998079999999875---299
Q 003571 599 -D-PEVHHRHLSHLFGLFPGHTITIEKNPDLCKAAEKTLQKR-------GE-------EGPGWSITWKTALWAR---LHD 659 (810)
Q Consensus 599 -~-~~~~hrh~s~L~~l~P~~~i~~~~~p~l~~aa~~tl~~r-------g~-------~~sgws~~~~a~~~AR---Lgd 659 (810)
. .-.+.-..+-|+.+.-.+-+++ .+|-.... ++.+... |. ..++...+|.+.+.-+ .++
T Consensus 339 G~~~~mDDanvpSLLslPylG~~~~-dDpiy~nT-r~~IlS~~NPyy~~G~~~~GIGspH~~~~~~Wpmsll~~alts~d 416 (489)
T 2p0v_A 339 GNQLLMDDANVPSLIALPYLGDVKV-TDPIYQNT-RKFVWSEDNPYFFKGSAGEGIGGPHIGYDMIWPMSIMMKAFTSQN 416 (489)
T ss_dssp SCEECCCCSSSSCSTTHHHHTSSCT-TCHHHHHH-HHHHTSTTSTTEEECSSCEEECCTTTCTTEECHHHHHHHHHTCCC
T ss_pred CCCCCCCCCCCCHHHHHHHHCCCCC-CCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 8721578887447787897089999-87899999-999971108863315522578999899996279999999986699
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 36999999998622
Q 003571 660 QEHAYRMVKRLFNL 673 (810)
Q Consensus 660 ~~~A~~~l~~~l~~ 673 (810)
.+++.+.|+.+++.
T Consensus 417 ~~E~~~~L~~l~~t 430 (489)
T 2p0v_A 417 DAEIKTCIKMLMDT 430 (489)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999961
Done!